BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 026566
         (237 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8LDU4|RCCR_ARATH Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis
           thaliana GN=RCCR PE=1 SV=2
          Length = 319

 Score =  207 bits (526), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 106/208 (50%), Positives = 147/208 (70%), Gaps = 9/208 (4%)

Query: 31  IDFILGSWVHSELPTGAALNITSLSAYLNSSTDAPNLLIELIQSSPSSLVLILDLSPRKD 90
           IDF++GSW+H ++PTG +LNITS+S +LNSST APN ++ELIQSS  SLVLILDL  RKD
Sbjct: 115 IDFVIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKD 174

Query: 91  LVLHPDYLQTFYESTRLDEYRQMLEKVPEVRPYFSSSLYLRCVISPSAIMVRVDTETETG 150
           LVL+PDYL+ +Y+ T LD +RQ L K+PEV PY S SL++R   SP+A M+++D E    
Sbjct: 175 LVLNPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAE---- 230

Query: 151 AGESTRLDYIITNHVHPVAKQVIGIWLNQCACGGRH---VGESDKAYLEKRDGLIKNKTI 207
             E  +L+ I+ +HV P AK+V+ +WL +C         VGE ++  LE+RD   + K+I
Sbjct: 231 --EEDKLEEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSI 288

Query: 208 EIDLGSSFPRLFGPQVASRVLGEIQKVF 235
           E DL   FPR+FG +V+SRV+  I++ F
Sbjct: 289 EDDLDLQFPRMFGEEVSSRVVHAIKEAF 316


>sp|Q9MTQ6|RCCR_HORVU Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare
           GN=rccR PE=2 SV=1
          Length = 205

 Score =  197 bits (501), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 89/205 (43%), Positives = 142/205 (69%), Gaps = 5/205 (2%)

Query: 31  IDFILGSWVHSELPTGAALNITSLSAYLNSSTDAPNLLIELIQSSPSSLVLILDLSPRKD 90
           IDF+L S +H ++P GA ++ITSL   LN+STDAP+ ++E IQ SP+S+V++LDL PRKD
Sbjct: 1   IDFMLQSSLHCKVPNGA-IDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKD 59

Query: 91  LVLHPDYLQTFYESTRLDEYRQMLEKVPEVRPYFSSSLYLRCVISPSAIMVRVDTETETG 150
           L LHP+Y++ +YE T +D+ R+++E++P+ RPY S SL++R   SP+A+   +D     G
Sbjct: 60  LALHPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTID----CG 115

Query: 151 AGESTRLDYIITNHVHPVAKQVIGIWLNQCACGGRHVGESDKAYLEKRDGLIKNKTIEID 210
            G    L+ I+  H+  V K ++ IWL+ CA     + E ++  + KRD  +++K+IE+D
Sbjct: 116 KGGEGTLEEIVHGHLASVVKGILQIWLDTCASDASEMEEGEREIMVKRDRTVRSKSIEVD 175

Query: 211 LGSSFPRLFGPQVASRVLGEIQKVF 235
           L ++ PR+FGP V+ R++ EI+K F
Sbjct: 176 LTANLPRMFGPDVSGRIIAEIRKAF 200


>sp|Q80ZE4|MPRA_MOUSE Membrane progestin receptor alpha OS=Mus musculus GN=Paqr7 PE=2
           SV=2
          Length = 345

 Score = 33.9 bits (76), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 5/53 (9%)

Query: 43  LPTGAALNITSLS-AYLNSSTDAPNLLIELIQSSPSSLVLILDLSPRKDLVLH 94
           LPT A L   S + +  N  +  P LL  + Q +PS+L  +LD+SP    VLH
Sbjct: 174 LPTAAFLAWLSCAGSCYNKYSQKPGLLGRIFQEAPSALAYVLDISP----VLH 222


>sp|P15964|GST26_SCHMA Glutathione S-transferase class-mu 26 kDa isozyme OS=Schistosoma
           mansoni PE=2 SV=1
          Length = 218

 Score = 30.8 bits (68), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 22/104 (21%), Positives = 45/104 (43%), Gaps = 18/104 (17%)

Query: 46  GAALNITSLSAYLNSSTDAPNLLIELIQSSPSSLVLILDLSPRK-----DLVLHPDYL-- 98
           GA L+I      +  + +   L ++ +   P  L +  D    K     + V HPD++  
Sbjct: 97  GAVLDIRMGVLRIAYNKEYETLKVDFLNKLPGRLKMFEDRLSNKTYLNGNCVTHPDFMLY 156

Query: 99  -----------QTFYESTRLDEYRQMLEKVPEVRPYFSSSLYLR 131
                      Q   E  +L  +++ +E +P+++ Y +SS Y++
Sbjct: 157 DALDVVLYMDSQCLNEFPKLVSFKKCIEDLPQIKNYLNSSRYIK 200


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.136    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,725,343
Number of Sequences: 539616
Number of extensions: 3508558
Number of successful extensions: 8162
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 8155
Number of HSP's gapped (non-prelim): 6
length of query: 237
length of database: 191,569,459
effective HSP length: 114
effective length of query: 123
effective length of database: 130,053,235
effective search space: 15996547905
effective search space used: 15996547905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)