BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026568
(236 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDV---IKKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L ++++ M D ++K +A + F + ++
Sbjct: 69 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 128
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGR 176
+ P+ VGS +V V+ +++AN GDSRAVL R
Sbjct: 129 IESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCR 165
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDV---IKKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L ++++ M D ++K +A + F + ++
Sbjct: 57 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 116
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGR 176
+ P+ VGS +V V+ +++AN GDSRAVL R
Sbjct: 117 IESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCR 153
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDV---IKKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L ++++ M D ++K +A + F + ++
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSE 113
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGR 176
+ P+ VGS +V V+ +++AN GDSRAVL R
Sbjct: 114 IESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCR 150
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI---KKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L +++ D +K +A + F + ++
Sbjct: 61 FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE 120
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGR 176
+ VGS +V V+ +++AN GDSRAVL R
Sbjct: 121 IETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCR 159
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 68 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 127
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGR 176
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 128 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 185
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 65 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFL 124
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGR 176
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 125 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 182
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 75 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 134
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGR 176
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 135 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 192
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 51 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 110
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGR 176
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 111 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 168
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 66 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 125
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGR 176
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 126 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 183
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 20/118 (16%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 62 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 121
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGR 176
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 122 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFR 179
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Query: 59 LEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVD 118
+ED G S LES +F +YDGH G + ++Y +HL H+ + S
Sbjct: 36 MEDAHTAVIGLPSGLESW---SFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP 92
Query: 119 VIKKAYQATEDGFFSLVTKQWPM--KPQIAAVGSCCLVGV-ISCGTLYIANLGDSRAVLG 175
++ GF + M K A VGV IS Y N GDSR +L
Sbjct: 93 SVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC 152
Query: 176 R 176
R
Sbjct: 153 R 153
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Query: 59 LEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVD 118
+ED G S LES +F +YDGH G + ++Y +HL H+ + S
Sbjct: 36 MEDAHTAVIGLPSGLESW---SFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP 92
Query: 119 VIKKAYQATEDGFFSLVTKQWPM--KPQIAAVGSCCLVGV-ISCGTLYIANLGDSRAVLG 175
++ GF + M K A VGV IS Y N GDSR +L
Sbjct: 93 SVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC 152
Query: 176 R 176
R
Sbjct: 153 R 153
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 18/115 (15%)
Query: 77 PYG----TFIGIYDGHGGPETSRYINDHLFQHL---KRFTSEQQS-----MSVDVIKKAY 124
P+G +F +YDGH G + Y + HL +H+ + F + +S +SV+ +K
Sbjct: 49 PHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGI 108
Query: 125 QATEDGFFSL---VTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGR 176
+ GF + + ++ + GS + +IS +Y N GDSRAVL R
Sbjct: 109 RT---GFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYR 160
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 144 QIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE 203
++A G+ V + L++AN GDSRA+LG + + G A+ LS++HN E Q
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNERELQR 253
Query: 204 MHSMHPDDSQIVVLKHNVWRVKGLI 228
+ HP + V+K + R+ GL+
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLL 276
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL 105
G +G++DGH G S+ +++ LF ++
Sbjct: 66 GMLLGVFDGHAGCACSQAVSERLFYYI 92
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 80 TFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQW 139
+F +YDGHGG E ++Y + HL LK + + +K+A+ F Q
Sbjct: 52 SFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLG-----FDATLLQE 106
Query: 140 PMKPQIAAV---------------GSCCLVGVISCGTLYIANLGDSRAVLGRLVKA 180
+ ++ + G +V ++ LY+AN GDSR V+ R KA
Sbjct: 107 KVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKA 162
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 144 QIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE 203
++A G+ V + L++AN GDSRA+LG + + G A+ LS++HN E +
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNEREVER 253
Query: 204 MHSMHPDDSQIVVLKHNVWRVKGLI 228
+ HP + V+K + R+ GL+
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLL 276
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL 105
G +G++DGH G S+ +++ LF ++
Sbjct: 66 GMLLGVFDGHAGCACSQAVSERLFYYI 92
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
+ +YDGHGGP + + + H+ + + +++++ ++ A+ + F S +
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLET-LLTLAFLEIDKAFSSHA--RLS 93
Query: 141 MKPQIAAVGSCCLVGVISCGT-LYIANLGDSRAVLGR 176
+ G+ V ++ G L +A++GDSRA+L R
Sbjct: 94 ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCR 130
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
+ +YDGHGGP + + + H+ + + +++++ ++ A+ + F S +
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLET-LLTLAFLEIDKAFSSHA--RLS 207
Query: 141 MKPQIAAVGSCCLVGVISCG-TLYIANLGDSRAVLGR 176
+ G+ V ++ G L +A++GDSRA+L R
Sbjct: 208 ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCR 244
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 18/126 (14%)
Query: 83 GIYDGHGGPETSRYINDHLFQHL--KRFTSEQQSMSVD-VIKKAYQATEDGFFSLVTKQW 139
G+++G+ G + ++ L L + +E V V+ +A+ E F +
Sbjct: 68 GVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDAL 127
Query: 140 PMKPQIA-----------AVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAI- 187
K + + G+ +V V+ LY+AN+G +RA+ L K+T + L +
Sbjct: 128 AEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRAL---LCKSTVDGLQVT 184
Query: 188 QLSSEH 193
QL+ +H
Sbjct: 185 QLNVDH 190
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 4/97 (4%)
Query: 99 DHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVIS 158
D + H+ T+ Q +S D + + Y+ ++ F V ++ +VGS ++ +I
Sbjct: 107 DSINPHVATKTAIQLHLSADGMNQ-YEISQQ--FENVLQKLDSLNNALSVGSSAVLALIH 163
Query: 159 CGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNV 195
LY+ N+G+ RA+L + + QLS +HN+
Sbjct: 164 RSHLYLGNIGNCRALLCK-TDEHDTLTVTQLSVDHNL 199
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
From Thermosynechococcus Elongatus
pdb|2J86|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
pdb|2J86|B Chain B, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
Length = 240
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 87 GH-GGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQI 145
GH GG E SR DH+ Q+L+ + Q V ++++A+ A + +Q
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHA----IVEQQRQNSAR 93
Query: 146 AAVGSCCLVGVIS--CGTLYIANLGDSR 171
A +G+ +V ++ + A++GDSR
Sbjct: 94 ADMGTTAVVILLDEKGDRAWCAHVGDSR 121
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 87 GH-GGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQI 145
GH GG E SR DH+ Q+L+ + Q V ++++A+ A + +Q
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHA----IVEQQRQNSAR 93
Query: 146 AAVGSCCLVGVIS--CGTLYIANLGDSR 171
A +G+ +V ++ + A++GDSR
Sbjct: 94 ADMGTTAVVILLDEKGDRAWCAHVGDSR 121
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 75 SGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFT 109
S P ++DGH G TS+Y H +HL + +
Sbjct: 39 SRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS 73
>pdb|2XL4|A Chain A, Lnta, A Virulence Factor From Listeria Monocytogenes
Length = 175
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 96 YINDHLFQHL---KRFTSEQQSMSVDVIKKAYQATEDG-FFSLVTKQW 139
+ ND++ Q + KR+ +Q+ +S+D IK+A +A+ D F + K+W
Sbjct: 69 FANDNINQXIGTXKRY--QQEILSIDAIKRASEASADTEAFKKIFKEW 114
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 12/139 (8%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
+ + DG GG + + L ++ D++ K A G S + Q
Sbjct: 53 LLALADGMGGHAAGEVASQLVIAALAHLDDDEPGG--DLLAKLDAAVRAGN-SAIAAQVE 109
Query: 141 MKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVL---GRLVKATGEVLAIQ-LSSEHNVG 196
M+P + +G+ + + L + ++GDSR L G L + T + +Q L E +
Sbjct: 110 MEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRIT 169
Query: 197 IESVRQEMHSMHPDDSQIV 215
E E HS HP S I+
Sbjct: 170 PE----EAHS-HPQRSLIM 183
>pdb|2Y09|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 28.1 bits (61), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 87 GH-GGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQAT 127
GH GG E SR DH+ Q+L+ + Q V ++++A+ A
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAA 79
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 149 GSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAI-QLSSEHNV 195
G+ +V V+ LY+AN+G +RA+ L K+T + L + QL+ +H
Sbjct: 165 GAMAVVAVLLNNKLYVANVGTNRAL---LCKSTVDGLQVTQLNVDHTT 209
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 4/46 (8%)
Query: 149 GSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAI-QLSSEH 193
G+ +V V+ LY+AN+G +RA+ L K+T + L + QL+ +H
Sbjct: 167 GAMAVVAVLLNNKLYVANVGTNRAL---LCKSTVDGLQVTQLNVDH 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,996,993
Number of Sequences: 62578
Number of extensions: 276860
Number of successful extensions: 688
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 645
Number of HSP's gapped (non-prelim): 31
length of query: 236
length of database: 14,973,337
effective HSP length: 96
effective length of query: 140
effective length of database: 8,965,849
effective search space: 1255218860
effective search space used: 1255218860
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)