Query 026572
Match_columns 236
No_of_seqs 194 out of 718
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 16:45:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026572.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026572hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cw9_A Translocase of inner mi 100.0 1.3E-31 4.3E-36 225.8 18.8 148 77-233 33-185 (194)
2 3qk9_A Mitochondrial import in 100.0 1.5E-27 5E-32 204.5 16.5 147 78-233 57-213 (222)
3 3fka_A Uncharacterized NTF-2 l 88.6 5.9 0.0002 29.2 11.0 91 103-234 11-116 (120)
4 3duk_A NTF2-like protein of un 87.6 5.8 0.0002 29.5 10.0 92 103-234 14-120 (125)
5 3blz_A NTF2-like protein of un 84.8 9 0.00031 28.1 9.7 30 102-131 13-42 (128)
6 3gzr_A Uncharacterized protein 74.7 25 0.00086 26.5 9.7 29 102-130 7-35 (146)
7 3gwr_A Putative calcium/calmod 74.2 26 0.00089 26.5 10.0 28 102-129 9-36 (144)
8 2ux0_A Calcium-calmodulin depe 71.4 27 0.00093 25.5 12.2 29 101-129 13-41 (143)
9 4hyz_A Uncharacterized protein 69.1 31 0.0011 25.3 11.8 40 92-135 9-48 (114)
10 2rcd_A Uncharacterized protein 64.1 38 0.0013 24.5 10.9 31 99-129 12-42 (129)
11 3dmc_A NTF2-like protein; stru 59.9 3.8 0.00013 30.8 1.8 33 98-130 9-41 (134)
12 3h3h_A Uncharacterized snoal-l 49.9 11 0.00038 27.1 2.9 29 101-129 8-36 (122)
13 3g0k_A Putative membrane prote 49.5 33 0.0011 25.9 5.7 30 101-130 27-57 (148)
14 2v2f_A Penicillin binding prot 48.0 4.6 0.00016 21.8 0.3 15 188-202 4-18 (26)
15 3cnx_A Uncharacterized protein 46.9 1E+02 0.0035 24.1 14.2 30 102-131 13-42 (170)
16 3fgy_A Uncharacterized NTF2-li 46.0 12 0.00042 27.0 2.6 30 101-130 5-34 (135)
17 3ehc_A Snoal-like polyketide c 45.9 16 0.00055 26.3 3.2 28 103-130 5-32 (128)
18 3f40_A Uncharacterized NTF2-li 44.3 14 0.00046 26.8 2.6 28 103-130 8-35 (114)
19 1ohp_A Steroid delta-isomerase 41.5 15 0.00051 25.6 2.4 29 102-130 6-34 (125)
20 2r4i_A Uncharacterized protein 40.2 16 0.00053 25.8 2.3 30 101-130 6-35 (123)
21 1tuh_A BAL32A, hypothetical pr 40.0 17 0.00059 27.2 2.7 29 101-129 29-57 (156)
22 3en8_A Uncharacterized NTF-2 l 39.9 15 0.0005 27.2 2.2 30 101-130 5-34 (128)
23 3i0y_A Putative polyketide cyc 39.8 16 0.00055 26.5 2.4 28 103-130 10-37 (140)
24 3ebt_A Uncharacterized NTF2-li 39.5 17 0.00059 26.0 2.5 29 102-130 4-32 (132)
25 1oh0_A Steroid delta-isomerase 39.2 20 0.00069 25.5 2.8 30 101-130 7-36 (131)
26 2r25_A Phosphorelay intermedia 38.9 38 0.0013 26.9 4.6 41 86-126 17-63 (167)
27 3fh1_A Uncharacterized NTF2-li 38.2 16 0.00053 26.6 2.1 30 101-130 17-46 (129)
28 1nww_A Limonene-1,2-epoxide hy 36.7 12 0.00041 27.7 1.2 28 103-130 24-51 (149)
29 2f86_B Hypothetical protein K1 36.6 22 0.00077 27.0 2.8 31 101-131 12-42 (143)
30 3ff2_A Uncharacterized cystati 35.8 20 0.00069 25.4 2.4 27 104-130 5-31 (117)
31 3dm8_A Uncharacterized protein 34.8 16 0.00056 27.1 1.7 28 103-130 6-33 (143)
32 3ec9_A Uncharacterized NTF2-li 34.5 21 0.00073 26.0 2.4 28 103-130 14-41 (140)
33 2k54_A Protein ATU0742; protei 33.7 25 0.00086 25.0 2.6 29 102-130 4-32 (123)
34 2bng_A MB2760; epoxide hydrola 33.5 25 0.00087 26.0 2.7 29 102-130 16-44 (149)
35 3d9r_A Ketosteroid isomerase-l 33.4 31 0.0011 24.5 3.1 29 102-130 12-40 (135)
36 2gex_A SNOL; alpha+beta barrel 33.2 26 0.00089 26.0 2.7 29 101-129 4-32 (152)
37 3f7x_A Putative polyketide cyc 32.4 23 0.00078 26.7 2.3 29 103-131 22-50 (151)
38 3hx8_A MLR2180 protein, putati 32.3 27 0.00092 24.5 2.6 32 99-130 4-35 (129)
39 3f7s_A Uncharacterized NTF2-li 32.2 28 0.00096 25.4 2.7 29 101-129 8-36 (142)
40 2kog_A Vesicle-associated memb 31.1 47 0.0016 24.8 3.7 17 40-56 3-19 (119)
41 1s5a_A Hypothetical protein YE 30.7 29 0.00098 25.3 2.5 29 102-130 11-39 (150)
42 3g16_A Uncharacterized protein 30.4 17 0.00059 28.5 1.2 30 102-131 11-40 (156)
43 3fsd_A NTF2-like protein of un 30.0 26 0.00089 25.6 2.1 30 101-130 14-43 (134)
44 3f14_A Uncharacterized NTF2-li 29.5 16 0.00054 26.0 0.8 26 105-130 4-29 (112)
45 3mso_A Steroid delta-isomerase 28.9 9.6 0.00033 28.9 -0.5 30 101-130 9-38 (143)
46 1z1s_A Hypothetical protein PA 28.4 33 0.0011 26.0 2.6 29 103-131 25-53 (163)
47 3g8z_A Protein of unknown func 27.6 30 0.001 25.8 2.1 29 102-130 21-49 (148)
48 2a0b_A HPT domain; sensory tra 26.6 86 0.003 22.7 4.6 29 97-125 34-62 (125)
49 2gey_A ACLR protein; alpha+bet 26.4 32 0.0011 25.8 2.2 28 102-129 5-32 (158)
50 2a15_A Hypothetical protein RV 25.1 45 0.0016 24.0 2.7 29 102-130 8-36 (139)
51 3f8x_A Putative delta-5-3-keto 24.3 13 0.00045 28.6 -0.5 39 92-130 11-49 (148)
52 4h3u_A Hypothetical protein; s 23.4 21 0.00071 26.9 0.5 26 105-130 29-54 (158)
53 3uo3_A J-type CO-chaperone JAC 22.5 2.1E+02 0.007 22.6 6.4 45 99-143 130-175 (181)
54 3bb9_A Putative orphan protein 22.4 49 0.0017 24.4 2.5 30 101-130 30-59 (148)
55 3h51_A Putative calcium/calmod 22.3 47 0.0016 24.8 2.4 30 101-130 20-49 (156)
56 2owp_A Hypothetical protein BX 21.7 78 0.0027 23.3 3.5 33 98-130 8-40 (129)
57 2f99_A Aklanonic acid methyl e 21.5 18 0.00062 27.1 -0.2 29 101-129 11-39 (153)
58 3us6_A Histidine-containing ph 21.3 1E+02 0.0036 23.6 4.2 40 86-125 30-77 (153)
59 3ihu_A Transcriptional regulat 21.2 2.2E+02 0.0075 22.5 6.4 38 98-135 177-214 (222)
60 3soy_A NTF2-like superfamily p 21.1 80 0.0027 23.6 3.5 33 97-129 6-38 (145)
61 3flj_A Uncharacterized protein 21.1 10 0.00036 29.7 -1.7 32 99-130 16-47 (155)
62 3sxm_A Transcriptional regulat 20.9 2.3E+02 0.0079 20.1 6.2 39 99-137 95-133 (140)
63 3k0z_A Putative polyketide cyc 20.6 45 0.0016 25.2 2.0 27 104-130 37-63 (159)
64 1yvi_A Histidine-containing ph 20.4 1.1E+02 0.0038 23.1 4.2 28 97-124 48-77 (149)
No 1
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=99.98 E-value=1.3e-31 Score=225.81 Aligned_cols=148 Identities=18% Similarity=0.271 Sum_probs=128.1
Q ss_pred HHHHhhHHHHHHHHh--CCCChHhHHHHHHHH-HHHHHHHHHcCCHHHHHHhhhHHHHHHHHHHHHHhhcCCCceeeeee
Q 026572 77 ILELKSAYAIAKLRK--SGYSKQKFYTEAVDL-YKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELI 153 (236)
Q Consensus 77 ~~~~~s~~~l~~ir~--~~F~~~~F~~~A~~~-y~~i~~A~a~gD~~~L~~l~Te~~y~~l~~~ik~r~~~g~~~~W~lv 153 (236)
..+...+.++++|++ |+|+++.|+++|+++ |.+|++||++||++.|++||||+||+.|.+++++|..+|.+.+++++
T Consensus 33 f~~s~~~~~l~~i~~~dp~Fd~~~Fl~~ak~~iy~~Iq~A~~~gD~~~Lr~~~t~~~~~~~~~~i~~r~~~g~~~~~~~v 112 (194)
T 2cw9_A 33 FSKTEMSEVLTEILRVDPAFDKDRFLKQCENDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKALGLQFHSRIL 112 (194)
T ss_dssp THHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHHTTCEECCEEE
T ss_pred cCCCHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHhcCHHHHHHHHHHHHHHHHCCCccccEEE
Confidence 356677889999998 999999999999998 89999999999999999999999999999999999999887766554
Q ss_pred cccccceEEEEEEeeeecccCCCceEEEEEEEEEEEEEEEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCC--eEEE
Q 026572 154 EPIIKMRTLRARLIGVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAY--WRLC 231 (236)
Q Consensus 154 ~~~~~~rvv~~r~i~i~~~~~~~~~~qvtVrf~s~Q~l~v~Dk~G~lv~G~~~~~~dv~EywvFeR~l~~~~~~--WrL~ 231 (236)
. +.+++++++. ..+..+++||+|+++|+.|++|++|++|+|+++.+.+|.|+|+|+|+++.++++ |+|+
T Consensus 113 ~------i~~~el~~a~---~~~~~~~itV~f~~~~i~~~rd~~G~vveG~~~~~~~v~e~W~f~R~~~~~~p~~~W~L~ 183 (194)
T 2cw9_A 113 D------IDNVDLAMGK---MVEQGPVLIITFQAQLVMVVRNPKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRLL 183 (194)
T ss_dssp E------EEEEEEEEEE---EETTEEEEEEEEEEEEECEEECTTSCEEEECTTCCEEEEEEEEEEECTTCSCGGGCEEEE
T ss_pred E------ecccEEEEEE---EeCCeeEEEEEEEEEEEEEEECCCCCEecCCCCCceEEEEEEEEEEeCCCCCCCCCEEEE
Confidence 2 2233333332 223679999999999999999999999999999999999999999999876654 9999
Q ss_pred EE
Q 026572 232 GR 233 (236)
Q Consensus 232 g~ 233 (236)
|.
T Consensus 184 ~i 185 (194)
T 2cw9_A 184 DI 185 (194)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 2
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=99.95 E-value=1.5e-27 Score=204.47 Aligned_cols=147 Identities=17% Similarity=0.163 Sum_probs=120.2
Q ss_pred HHHhhHHHHHHHHh--CCCChHhHHHHHHHH-HHHHHHHHHcCCHHHHHHhhhHHHHHHHHHHHHHhhcCCCceeeeeec
Q 026572 78 LELKSAYAIAKLRK--SGYSKQKFYTEAVDL-YKEINTLMANGDKTSLRKAVTEKMYSALKNEIKQRESMWSSVNWELIE 154 (236)
Q Consensus 78 ~~~~s~~~l~~ir~--~~F~~~~F~~~A~~~-y~~i~~A~a~gD~~~L~~l~Te~~y~~l~~~ik~r~~~g~~~~W~lv~ 154 (236)
.....+.+|++|++ |+|++.+|+++|++. |.+|++||++||.+.|++|||+.+|+.|.+.|++|..+|.++
T Consensus 57 ~~te~a~~l~~Ik~~DPsF~~~~Fl~~a~~ai~p~Il~Af~~GD~~~Lk~llse~~y~~f~~~i~~r~~~G~~~------ 130 (222)
T 3qk9_A 57 AETESSRVYSQFKLMDPTFSNESFTRHLREYIVPEILEAYVKGDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYA------ 130 (222)
T ss_dssp ---CCHHHHTTCC-----CCHHHHHHHHHHTHHHHHHHHHHHTCHHHHHHHBCHHHHHHHHHHHHHHHTTTEEE------
T ss_pred CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhhcCHHHHHHHHHHHHHHHHCCCEe------
Confidence 34455677888887 999999999999998 578999999999999999999999999999999999988754
Q ss_pred ccccceEEEEEEeeeecccCC--CceEEEEEEEEEEEEEEEEc-CCCceecCCCCCeeeeeEEEEEEEeCCCCC----CC
Q 026572 155 PIIKMRTLRARLIGVDRNDLN--KVFVQLTLEFLAKQKFEAYD-SKGVTVAGDKTKEVLVRDIWVFEKSLFHPG----AY 227 (236)
Q Consensus 155 ~~~~~rvv~~r~i~i~~~~~~--~~~~qvtVrf~s~Q~l~v~D-k~G~lv~G~~~~~~dv~EywvFeR~l~~~~----~~ 227 (236)
+.++++++-++|..+.+. +..++|||+|.++|+.|++| ++|++|+|+++.+..+.|+|+|+|+.+..+ ++
T Consensus 131 ---d~~il~I~~vdI~~a~~~~~~~~p~itV~f~aq~i~~~rd~k~GeVVeGd~d~i~~~~~~WtF~R~~~~~d~~~tp~ 207 (222)
T 3qk9_A 131 ---DGRILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEIAAGDEANILMSSYAMVFTRDPEQIDDDETEG 207 (222)
T ss_dssp ---CCEEEEEEEEEEEEEEECSSSCCEEEEEEEEEEEECCEEESTTCCCSSSCTTCCEEEEEEEEEEECCC--------C
T ss_pred ---eeeEeeecceEEEEEEEecCCCceEEEEEEEEEEEEEEEeCCCCccccCCCCCceEEEEEEEEEEcCccCCCCCCCC
Confidence 344555555555544443 48899999999999999999 899999999999999999999999997544 78
Q ss_pred eEEEEE
Q 026572 228 WRLCGR 233 (236)
Q Consensus 228 WrL~g~ 233 (236)
|+|.+.
T Consensus 208 WkL~ei 213 (222)
T 3qk9_A 208 WKILEF 213 (222)
T ss_dssp EEEEEE
T ss_pred cEEehh
Confidence 999875
No 3
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=88.57 E-value=5.9 Score=29.25 Aligned_cols=91 Identities=15% Similarity=0.177 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH--------------HHHHHHHHHHhhcC-CCceeeeeecccccceEEEEEEe
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM--------------YSALKNEIKQRESM-WSSVNWELIEPIIKMRTLRARLI 167 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~--------------y~~l~~~ik~r~~~-g~~~~W~lv~~~~~~rvv~~r~i 167 (236)
.+++...-.+++.++|.+.|+...+|.+ .+++.. +...+.. +.. ..-+++. +
T Consensus 11 I~~~l~~Y~~g~~~~D~~~l~~~FhpdA~~~~~~~g~~~~~~~~~~~~-v~~~p~~~~~~---------~~~~i~~---I 77 (120)
T 3fka_A 11 LTALVETYVMAMTRGDRPALERIFFGKASEVGHYEGELLWNSRDAFIA-MCEDAADAETD---------PFWAISS---V 77 (120)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHEEEEEEEEEEETTEEEEEEHHHHHH-HHHHHCCSSCC---------CCEEEEE---E
T ss_pred HHHHHHHHHHHHHhcCHHHHHhhCCCCeEEEEecCCcEEEcCHHHHHh-hcCCccCCCCC---------ceEEEEE---E
Confidence 3445556677889999999999988887 456666 6533321 110 0112222 2
Q ss_pred eeecccCCCceEEEEEEEEEEEEEEEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEEEe
Q 026572 168 GVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCGRI 234 (236)
Q Consensus 168 ~i~~~~~~~~~~qvtVrf~s~Q~l~v~Dk~G~lv~G~~~~~~dv~EywvFeR~l~~~~~~WrL~g~i 234 (236)
+|. ++.+.+.|.+. + . ...++||.+|.|. ++.|+|..|+
T Consensus 78 ~i~-----gd~A~a~v~~~-------~-------~-----~~~f~D~~~L~k~----dg~WkIv~K~ 116 (120)
T 3fka_A 78 SVQ-----GDIAMLHVEND-------W-------A-----GMRFDDFLTVLLH----EGSWRIVSKV 116 (120)
T ss_dssp EEE-----TTEEEEEEEEE-------E-------T-----TEEEEEEEEEEEE----TTEEEEEEEE
T ss_pred EEE-----CCEEEEEEEEE-------c-------C-----CCceEEEEEEEEe----CCEEEEEEEE
Confidence 232 34555555531 1 1 2368999999999 8999999986
No 4
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=87.65 E-value=5.8 Score=29.54 Aligned_cols=92 Identities=11% Similarity=0.183 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH---------------HHHHHHHHHHhhcCCCceeeeeecccccceEEEEEEe
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM---------------YSALKNEIKQRESMWSSVNWELIEPIIKMRTLRARLI 167 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~---------------y~~l~~~ik~r~~~g~~~~W~lv~~~~~~rvv~~r~i 167 (236)
.+++......++.++|.+.|+..++|.+ ++++...+..+... ... ..+++. +
T Consensus 14 I~~~l~~y~~g~~~~D~~~l~~~f~pda~~~~~~~G~~l~~~~~~e~~~~v~~~~p~-~~~---------~~~I~~---I 80 (125)
T 3duk_A 14 ITEVLNVYMNAAESGTGEEMSAAFHKDATIFGYVGDKLAFNGPIKDLYDWHNSNGPA-KNV---------QSRITN---I 80 (125)
T ss_dssp HHHHHHHHHHHHHHCCHHHHGGGEEEEEEEEEEETTEEEEEEETHHHHHHHHHHCCC-TTC---------EEEEEE---E
T ss_pred HHHHHHHHHHHHHhcCHHHHHHhCCCCcEEEEEcCCCEEeeCCHHHHHHHHhccCCC-Ccc---------cceEEE---E
Confidence 4556667778889999999999988876 25555555544211 110 111221 2
Q ss_pred eeecccCCCceEEEEEEEEEEEEEEEEcCCCceecCCCCCeeeeeEEEEEEEeCCCCCCCeEEEEEe
Q 026572 168 GVDRNDLNKVFVQLTLEFLAKQKFEAYDSKGVTVAGDKTKEVLVRDIWVFEKSLFHPGAYWRLCGRI 234 (236)
Q Consensus 168 ~i~~~~~~~~~~qvtVrf~s~Q~l~v~Dk~G~lv~G~~~~~~dv~EywvFeR~l~~~~~~WrL~g~i 234 (236)
++. ++.+.+.|++. . ..| ..++||.+|.|. ++.|+|..|+
T Consensus 81 ~i~-----gd~A~a~v~~~--~-----------~~~-----~~f~D~l~L~k~----dg~WkIv~K~ 120 (125)
T 3duk_A 81 DIV-----GTVAHARVEAE--N-----------WTN-----FKFSDLFLLLKL----DGKWTIVNKV 120 (125)
T ss_dssp EEE-----TTEEEEEEEEE--C-----------SSS-----CCEEEEEEEEEE----TTEEEEEEEE
T ss_pred EEE-----CCEEEEEEEEE--E-----------cCC-----CeEEEEEEEEEe----CCEEEEEEEE
Confidence 222 34555555431 0 011 357999999999 7899999986
No 5
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=84.79 E-value=9 Score=28.15 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 131 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~y 131 (236)
..+++......|+..+|.+.|+...+|.+.
T Consensus 13 aI~~~~~~y~~a~~~~D~~~l~~~f~~da~ 42 (128)
T 3blz_A 13 AIVEVLSKYNEGGKKADSTIMRPAFSSQAT 42 (128)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHhhCCCcE
Confidence 445677788899999999999999888753
No 6
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=74.70 E-value=25 Score=26.53 Aligned_cols=29 Identities=7% Similarity=-0.078 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..++++.....||.++|.+.|..+.+|.+
T Consensus 7 aI~~l~~~~~~A~~~~D~d~~~~lf~~Da 35 (146)
T 3gzr_A 7 AIQALIQAYFTAWNTNAPERFAEIFWPDG 35 (146)
T ss_dssp HHHHHHHHHHHHHHTTCGGGSGGGEEEEE
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhhccCCe
Confidence 44678899999999999999999888765
No 7
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=74.15 E-value=26 Score=26.46 Aligned_cols=28 Identities=0% Similarity=-0.086 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
.+.++.....+||.+||.+.|..+.++.
T Consensus 9 ~~~~~~~af~~A~~~gD~da~~al~a~d 36 (144)
T 3gwr_A 9 TPEAAEDAFYAAFEARSLDDMMAVWARD 36 (144)
T ss_dssp SHHHHHHHHHHHHHHTCHHHHHHHBCSS
T ss_pred CHHHHHHHHHHHHHcCCHHHHHhhccCC
Confidence 4567777888999999999999888765
No 8
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=71.35 E-value=27 Score=25.51 Aligned_cols=29 Identities=17% Similarity=0.283 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
++..++....++||.+||.+.+..++++.
T Consensus 13 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~d 41 (143)
T 2ux0_A 13 QEIIKITEQLIEAINNGDFEAYTKICDPG 41 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCC
Confidence 45667888999999999999999988776
No 9
>4hyz_A Uncharacterized protein; PF13026 family protein, DUF3887, structural genomics, joint for structural genomics, JCSG; 2.25A {Ruminococcus gnavus}
Probab=69.11 E-value=31 Score=25.28 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=30.2
Q ss_pred CCCChHhHHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHHHHHHH
Q 026572 92 SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALK 135 (236)
Q Consensus 92 ~~F~~~~F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~y~~l~ 135 (236)
..|+.+.-.+.|+ ++.+-+.+||.+.++.++++.|-+.|.
T Consensus 9 ~~fde~~v~~~A~----~~I~~l~~~dy~~i~~~~~~~lk~~Lt 48 (114)
T 4hyz_A 9 EGFDKETVRKQAM----EDIEIAQSKDYESWKSRFTKDLQSSLT 48 (114)
T ss_dssp TTCCHHHHHHHHH----HHHHHHHTTCHHHHHTTBCHHHHTTCC
T ss_pred hhhhHHHHHHHHH----HHHHHHHhCCHHHHHHHhCHHHHhhCC
Confidence 5788887777776 455667789999999999988855443
No 10
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=64.11 E-value=38 Score=24.45 Aligned_cols=31 Identities=6% Similarity=0.137 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 99 FYTEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 99 F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
=..++.++|....+|+.+||.+.|..+.++.
T Consensus 12 ~~~ei~~~~~~y~~A~~~~D~~~l~~lf~~d 42 (129)
T 2rcd_A 12 VLADVTAAFYRYEKALTGNDVAVLDELFWHD 42 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHBCCS
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHhccCC
Confidence 3566788888999999999999999998876
No 11
>3dmc_A NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, unknow function; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.17.4.10
Probab=59.93 E-value=3.8 Score=30.77 Aligned_cols=33 Identities=15% Similarity=0.148 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 98 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 98 ~F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.=++.+++++....+|+++||.+.|..++++.+
T Consensus 9 ~~~~~~~~~~~~f~~A~~~gD~~~l~~lla~D~ 41 (134)
T 3dmc_A 9 NTLKVAHQGFEFFTQGLATGEWQKFLDMLTEDF 41 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHHHHcCCCE
Confidence 345678899999999999999999999887643
No 12
>3h3h_A Uncharacterized snoal-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE UNL MES; 1.60A {Burkholderia thailandensis E264}
Probab=49.85 E-value=11 Score=27.11 Aligned_cols=29 Identities=10% Similarity=0.012 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
+.++++.....+||+++|.+.|..++++.
T Consensus 8 ~~~~~~~~~~~~a~n~~D~~~l~~l~a~D 36 (122)
T 3h3h_A 8 AFAQQFSREWIDAWNAHDLDAILSHYADG 36 (122)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHhcCCC
Confidence 45677888999999999999999887653
No 13
>3g0k_A Putative membrane protein; snoal-like polyketide cyclase, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.30A {Novosphingobium aromaticivorans}
Probab=49.49 E-value=33 Score=25.88 Aligned_cols=30 Identities=13% Similarity=0.221 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHH-HHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINT-LMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~-A~a~gD~~~L~~l~Te~~ 130 (236)
+..+++.....+ +|.++|.+.+.+++++.+
T Consensus 27 ~~nk~lV~~f~~~a~~~~D~~~~~~~~a~D~ 57 (148)
T 3g0k_A 27 QANHDLVIEMYNKVLIAMDSSAVDRYIAPGY 57 (148)
T ss_dssp HHHHHHHHHHHHHTTTTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHhcCcCe
Confidence 445667777777 889999999999988764
No 14
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=47.99 E-value=4.6 Score=21.80 Aligned_cols=15 Identities=27% Similarity=0.390 Sum_probs=12.0
Q ss_pred EEEEEEEcCCCceec
Q 026572 188 KQKFEAYDSKGVTVA 202 (236)
Q Consensus 188 ~Q~l~v~Dk~G~lv~ 202 (236)
.+...+||++|++|.
T Consensus 4 ~~ss~IYD~~g~~i~ 18 (26)
T 2v2f_A 4 TTSSKIYDNKNQLIA 18 (26)
T ss_pred CCCCEEEeCCCCEee
Confidence 355678999999886
No 15
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=46.89 E-value=1e+02 Score=24.14 Aligned_cols=30 Identities=13% Similarity=-0.010 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 131 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~y 131 (236)
...++.....+||.+||.+.|..+-++...
T Consensus 13 ~I~~~~~~~~~A~~~gD~~~l~alwa~d~~ 42 (170)
T 3cnx_A 13 QVGLANTAFYEAMERGDFETLSSLWLTPAD 42 (170)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHBCCHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhcCCcc
Confidence 445677888999999999999998887754
No 16
>3fgy_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.59A {Burkholderia xenovorans LB400} SCOP: d.17.4.0
Probab=46.02 E-value=12 Score=27.05 Aligned_cols=30 Identities=30% Similarity=0.449 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+..+++.....+||.+||.+.+..++++.+
T Consensus 5 ~~~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 34 (135)
T 3fgy_A 5 QENVQIVKDFFAAMGRGDKKGLLAVSAEDI 34 (135)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 345778888889999999999999987764
No 17
>3ehc_A Snoal-like polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.12A {Agrobacterium tumefaciens str}
Probab=45.95 E-value=16 Score=26.35 Aligned_cols=28 Identities=14% Similarity=0.152 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.++++....+||+++|.+.+.+++++.+
T Consensus 5 ~~~~v~~~~~~~~~~d~~~~~~~~a~d~ 32 (128)
T 3ehc_A 5 LNDIYLAYLDSLNHQAFDELGTFVDDNV 32 (128)
T ss_dssp HHHHHHHHHHHHHTTCGGGGGGTEEEEE
T ss_pred HHHHHHHHHHHHhcCCHHHHHHhcCcce
Confidence 4678888888999999999999998754
No 18
>3f40_A Uncharacterized NTF2-like protein; YP_677363.1, NTF2-like protein of unknown function, structural genomics; HET: MSE; 1.27A {Cytophaga hutchinsonii atcc 33406}
Probab=44.28 E-value=14 Score=26.82 Aligned_cols=28 Identities=18% Similarity=0.229 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.+++-....+||++||.+.|..+++|.+
T Consensus 8 ~~~~v~~f~~A~~~gD~~~l~~lla~Dv 35 (114)
T 3f40_A 8 TRDLVLEFIHALNTENFPAAKKRLNENF 35 (114)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCe
Confidence 4556667788999999999999998865
No 19
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=41.45 E-value=15 Score=25.57 Aligned_cols=29 Identities=7% Similarity=0.148 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..+++.....+||++||.+.+..+++|.+
T Consensus 6 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 34 (125)
T 1ohp_A 6 HMTAVVQRYVAALNAGDLDGIVALFADDA 34 (125)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHcCCCe
Confidence 45677788888999999999999988764
No 20
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=40.16 E-value=16 Score=25.78 Aligned_cols=30 Identities=23% Similarity=0.287 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
++..++.....+|+.++|.+.|..++++.+
T Consensus 6 ~~i~~l~~~~~~A~~~~D~~~l~~l~~~d~ 35 (123)
T 2r4i_A 6 DVILDCEKKLLTAIQNNDVESLEVLLHDDL 35 (123)
T ss_dssp HHHTHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhhCcCe
Confidence 456678899999999999999999988764
No 21
>1tuh_A BAL32A, hypothetical protein EGC068; unknown function; 1.85A {Uncultured bacterium} SCOP: d.17.4.11
Probab=40.00 E-value=17 Score=27.23 Aligned_cols=29 Identities=14% Similarity=0.235 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
+..+++.....+||++||.+.|..++++.
T Consensus 29 ~~~~~~v~~~~~a~~~gD~~~l~~l~a~D 57 (156)
T 1tuh_A 29 EQNAETVRRGYAAFNSGDMKTLTELFDEN 57 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEE
T ss_pred chHHHHHHHHHHHHhCCCHHHHHHhcCCC
Confidence 34567788888899999999999988765
No 22
>3en8_A Uncharacterized NTF-2 like protein; YP_553245.1, NTF-2 like protein of unknown function, structu genomics; HET: MSE PG4; 1.85A {Burkholderia xenovorans LB400} SCOP: d.17.4.20
Probab=39.86 E-value=15 Score=27.15 Aligned_cols=30 Identities=10% Similarity=0.028 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+..+++.....+||++||.+.|..|+++.+
T Consensus 5 ~~~~~~v~~~~~a~~~~D~~~l~~llaeD~ 34 (128)
T 3en8_A 5 EKIREALNAHWQASAAGDFDAEHDIYDDDA 34 (128)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhcCCCE
Confidence 345678888889999999999999998765
No 23
>3i0y_A Putative polyketide cyclase; cystatin-like fold, structural genomics, joint center for ST genomics, JCSG, protein structure initiative; HET: MSE UNL; 1.50A {Xanthomonas campestris PV}
Probab=39.83 E-value=16 Score=26.48 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
++++.....+||+++|.+.+..++++.+
T Consensus 10 ~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 37 (140)
T 3i0y_A 10 ATGLVQAYYEAFNRGDWDAMLAFLAEDV 37 (140)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHcCCcE
Confidence 5677888889999999999999998875
No 24
>3ebt_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; 1.30A {Burkholderia pseudomallei K96243} SCOP: d.17.4.9
Probab=39.54 E-value=17 Score=26.01 Aligned_cols=29 Identities=10% Similarity=0.132 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..+++.....+||.+||.+.+..++++.+
T Consensus 4 ~~~~~v~~~~~a~~~~d~~~~~~l~a~D~ 32 (132)
T 3ebt_A 4 NNMQTVRESYEAFHRRDLPGVLAALAPDV 32 (132)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred hHHHHHHHHHHHHhccCHHHHHHhcCCCE
Confidence 34677888889999999999999998875
No 25
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=39.24 E-value=20 Score=25.48 Aligned_cols=30 Identities=17% Similarity=0.217 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+..+++.....+||.+||.+.|..++++.+
T Consensus 7 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 36 (131)
T 1oh0_A 7 QEVQGLMARYIELVDVGDIEAIVQMYADDA 36 (131)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHcCCCE
Confidence 345667778889999999999999888764
No 26
>2r25_A Phosphorelay intermediate protein YPD1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: a.24.10.2 PDB: 1c03_A 1oxk_A 1oxb_A 1c02_A 1qsp_A
Probab=38.88 E-value=38 Score=26.95 Aligned_cols=41 Identities=20% Similarity=0.320 Sum_probs=32.0
Q ss_pred HHHHHh--CCCCh---HhHHHHHHHHHHHHHHHHH-cCCHHHHHHhh
Q 026572 86 IAKLRK--SGYSK---QKFYTEAVDLYKEINTLMA-NGDKTSLRKAV 126 (236)
Q Consensus 86 l~~ir~--~~F~~---~~F~~~A~~~y~~i~~A~a-~gD~~~L~~l~ 126 (236)
|..+.+ |+|.. ..|.+.|...+..|.+|++ .+|.+.|+.++
T Consensus 17 L~el~dd~p~Fv~elV~~F~edse~~l~~L~~AL~~~~D~~~L~~~a 63 (167)
T 2r25_A 17 IISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLG 63 (167)
T ss_dssp HHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHhcccCchHHHHHHHHHHHhHHHHHHHHHHHHhcccCHHHHHHHH
Confidence 344444 45643 4699999999999999999 99999888654
No 27
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=38.17 E-value=16 Score=26.56 Aligned_cols=30 Identities=13% Similarity=0.344 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+..+++.....+||+++|.+.|..++++.+
T Consensus 17 ~~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 46 (129)
T 3fh1_A 17 EQTAEIMRRFNDVFQLHDPAALPELIAEEC 46 (129)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGHHHHEEEEE
T ss_pred hhHHHHHHHHHHHHHccCHHHHHHhcCCCE
Confidence 445677788888999999999999887654
No 28
>1nww_A Limonene-1,2-epoxide hydrolase; HET: MES; 1.20A {Rhodococcus erythropolis} SCOP: d.17.4.8 PDB: 1nu3_A*
Probab=36.65 E-value=12 Score=27.69 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.+++.....+||++||.+.|..++++++
T Consensus 24 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 51 (149)
T 1nww_A 24 DEKIVLEFMDALTSNDAAKLIEYFAEDT 51 (149)
T ss_dssp HHHHHHHHHHHGGGCCHHHHHTTBCSSC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHhCCCE
Confidence 3556677788999999999999988764
No 29
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=36.61 E-value=22 Score=26.99 Aligned_cols=31 Identities=10% Similarity=0.132 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKMY 131 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~y 131 (236)
++-.++-....+|+.+||.+.+..+|++.+-
T Consensus 12 ~eI~~~~~~~~~Ai~~gD~~~~~~l~~~dv~ 42 (143)
T 2f86_B 12 QDIVRVTQTLLDAISCKDFETYTRLCDTSMT 42 (143)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHhcCCCEE
Confidence 3345667889999999999999988877653
No 30
>3ff2_A Uncharacterized cystatin fold protein (YP_497570. NTF2 superfamily; structural genomics; 1.90A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=35.80 E-value=20 Score=25.36 Aligned_cols=27 Identities=11% Similarity=0.107 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 104 VDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 104 ~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+++.....+||+++|.+.+..++++.+
T Consensus 5 ~~~v~~~~~a~n~~D~~~~~~~~a~D~ 31 (117)
T 3ff2_A 5 LETAKAMIAAYNAQDVDTYVSYMTDDA 31 (117)
T ss_dssp HHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcccCHHHHHHhcCCcE
Confidence 467788889999999999999988776
No 31
>3dm8_A Uncharacterized protein RPA4348; siras, putative isomerase, structural genomics, PSI-2, prote structure initiative; HET: CE9; 1.80A {Rhodopseudomonas palustris} SCOP: d.17.4.20
Probab=34.78 E-value=16 Score=27.12 Aligned_cols=28 Identities=4% Similarity=0.215 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..++.....+||++||.+.|..++++.+
T Consensus 6 ~~~~v~~~~~a~~~gD~~~l~~l~a~Dv 33 (143)
T 3dm8_A 6 LWRFSRALHRALNDRQTEELATIIDDNI 33 (143)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHhcCCCe
Confidence 4566777889999999999999987664
No 32
>3ec9_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.60A {Burkholderia thailandensis E264} SCOP: d.17.4.10
Probab=34.48 E-value=21 Score=25.96 Aligned_cols=28 Identities=4% Similarity=0.105 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.+++.....+|+.+||.+.|..++++.+
T Consensus 14 ~~~~v~~~~~a~~~gD~~~~~~l~a~D~ 41 (140)
T 3ec9_A 14 PYQIVADHYAASDRHDPAAMMADIAPAI 41 (140)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHhCCCHHHHHHhcCCCe
Confidence 4667788888999999999999987765
No 33
>2k54_A Protein ATU0742; protein of unknown function, structural genomics, PSI-2, Pro structure initiative; NMR {Agrobacterium tumefaciens str} SCOP: d.17.4.29
Probab=33.68 E-value=25 Score=24.96 Aligned_cols=29 Identities=7% Similarity=-0.129 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.++++.....+||++||.+.+..++++.+
T Consensus 4 ~~~~~v~~~~~a~n~~D~~~~~~~~a~D~ 32 (123)
T 2k54_A 4 EIELPVQKQLEAYNARDIDAFMAWWADDC 32 (123)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHTEEEEE
T ss_pred CHHHHHHHHHHHHHhcCHHHHHhhcCCce
Confidence 35667777789999999999999988875
No 34
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=33.52 E-value=25 Score=26.01 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..+++.....+||.+||.+.|..++++++
T Consensus 16 ~~~~~v~~f~~a~~~gD~~~l~~l~a~D~ 44 (149)
T 2bng_A 16 EAIRAVEAFLNALQNEDFDTVDAALGDDL 44 (149)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHHcCCCE
Confidence 45667788889999999999999998764
No 35
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=33.36 E-value=31 Score=24.48 Aligned_cols=29 Identities=10% Similarity=-0.069 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..+++.....+||++||.+.+..+.++.+
T Consensus 12 ~i~~~~~~~~~a~~~~D~~~~~~l~a~D~ 40 (135)
T 3d9r_A 12 VIEAAAIAYLTAFNRADIPAVIATYTDDG 40 (135)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHhcCCCE
Confidence 45667788899999999999999887763
No 36
>2gex_A SNOL; alpha+beta barrel, oxidoreductase; 2.50A {Streptomyces nogalater} SCOP: d.17.4.9
Probab=33.21 E-value=26 Score=26.04 Aligned_cols=29 Identities=10% Similarity=-0.018 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
+..+++.....+||.+||.+.+..++++.
T Consensus 4 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D 32 (152)
T 2gex_A 4 TANKERCLEMVAAWNRWDVSGVVAHWAPD 32 (152)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHHcCCC
Confidence 34567788888899999999999988764
No 37
>3f7x_A Putative polyketide cyclase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.24A {Pseudomonas putida KT2440}
Probab=32.40 E-value=23 Score=26.70 Aligned_cols=29 Identities=17% Similarity=0.285 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKMY 131 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~y 131 (236)
++++.....+||++||.+.+..++++.+-
T Consensus 22 ~~~lv~~~~~a~~~~D~~~l~~l~a~D~v 50 (151)
T 3f7x_A 22 ATELVNAYYAAFNAGDMPAFLALLSEDVI 50 (151)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 46777888899999999999999887764
No 38
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=32.31 E-value=27 Score=24.55 Aligned_cols=32 Identities=3% Similarity=-0.037 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 99 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 99 F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..+..+++.....+||.++|.+.|..+.++.+
T Consensus 4 ~~~~I~~~~~~~~~a~~~~D~~~~~~l~a~Da 35 (129)
T 3hx8_A 4 AKEAIEAANADFVKAYNSKDAAGVASKYMDDA 35 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhCCCe
Confidence 34556778888899999999999999888753
No 39
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=32.21 E-value=28 Score=25.41 Aligned_cols=29 Identities=10% Similarity=0.131 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
++.++++....+|+++||.+.+..+.++.
T Consensus 8 ~~I~~l~~~~~~A~~~~D~~~~~~l~a~D 36 (142)
T 3f7s_A 8 SEIRQLIERWMQAVRDRDIPGIIAPYADD 36 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCC
Confidence 34567788899999999999999988875
No 40
>2kog_A Vesicle-associated membrane protein 2; synaptobrevin, VAMP2, DPC micelle, snare, coiled coil, membrane fusion, transmembrane; NMR {Rattus norvegicus}
Probab=31.08 E-value=47 Score=24.82 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=13.0
Q ss_pred eecccccccccccCCCC
Q 026572 40 SISSPGFIYEPYAPREA 56 (236)
Q Consensus 40 ~~~s~g~i~e~yvpp~~ 56 (236)
+++.|..-||||+|-..
T Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (119)
T 2kog_A 3 HMSATAATVPPAAPAGE 19 (119)
T ss_dssp -CCCCCCCCCCCCCCCC
T ss_pred cCCCCCCCCCCCCCCCC
Confidence 46778899999999543
No 41
>1s5a_A Hypothetical protein YESE; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Bacillus subtilis} SCOP: d.17.4.10
Probab=30.72 E-value=29 Score=25.33 Aligned_cols=29 Identities=17% Similarity=0.197 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..+++.....+||.++|.+.|..++++++
T Consensus 11 ~~~~~v~~~~~a~~~~D~~~l~~l~a~D~ 39 (150)
T 1s5a_A 11 KACETLRKFMAYMLEKDMKSWTELWDENA 39 (150)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEE
T ss_pred CHHHHHHHHHHHHhcCCHHHHHHhCCCCE
Confidence 35677888889999999999999988764
No 42
>3g16_A Uncharacterized protein with cystatin-like fold; YP_001022489.1, protein of unknown function with cystatin-LI structural genomics; HET: MSE; 1.45A {Methylibium petroleiphilum PM1}
Probab=30.36 E-value=17 Score=28.46 Aligned_cols=30 Identities=3% Similarity=0.018 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKMY 131 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~y 131 (236)
..+++.....+||++||.+.|..+++|.+-
T Consensus 11 ~~~~~v~ry~~A~n~gD~d~l~~l~aeD~v 40 (156)
T 3g16_A 11 AMEKVIRTYYDGCNEADEAKMIACFVPEAV 40 (156)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHTTEEEEEE
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHhcCCCEE
Confidence 345667777889999999999999976654
No 43
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=29.95 E-value=26 Score=25.64 Aligned_cols=30 Identities=13% Similarity=0.267 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
++..+++....+|+.+||.+.|..++++++
T Consensus 14 ~~I~~l~~~~~~A~~~~D~~~l~~L~~~d~ 43 (134)
T 3fsd_A 14 DDIAFYEERLRAAMLTGDLKGLETLLADDL 43 (134)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHhhcCCCE
Confidence 345678889999999999999999998764
No 44
>3f14_A Uncharacterized NTF2-like protein; YP_680363.1, NTF2-like protein of unknown function, structur genomics; HET: MSE TRS PGE; 1.45A {Cytophaga hutchinsonii atcc 33406}
Probab=29.50 E-value=16 Score=26.02 Aligned_cols=26 Identities=12% Similarity=0.169 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 105 DLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 105 ~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+.-....+||++||.+.+..++++.+
T Consensus 4 ~~v~~~~~a~~~gD~~~~~~~ladDv 29 (112)
T 3f14_A 4 TTHYSIAQHFSSGDFPAVYACFNDII 29 (112)
T ss_dssp HHHHHHHHHHHTTCGGGTGGGEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHhcCCce
Confidence 34567788999999999999988764
No 45
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=28.88 E-value=9.6 Score=28.91 Aligned_cols=30 Identities=20% Similarity=0.246 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+.+++++...++|+++||.+.|..++++++
T Consensus 9 ~~~~~~~~~~~~a~~~~D~~~l~~l~a~D~ 38 (143)
T 3mso_A 9 ANAAATLAEWHGLIARRDLSGLPRLLHPDA 38 (143)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTGGGGEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHhcCCCE
Confidence 456788899999999999999999887654
No 46
>1z1s_A Hypothetical protein PA3332; beta barrel, conserved hypothetical protein, structural genomics, PSI, protein structure initiative; HET: PGE; 1.49A {Pseudomonas aeruginosa PAO1} SCOP: d.17.4.10
Probab=28.44 E-value=33 Score=25.99 Aligned_cols=29 Identities=17% Similarity=0.162 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHhhhHHHH
Q 026572 103 AVDLYKEINTLMANGDKTSLRKAVTEKMY 131 (236)
Q Consensus 103 A~~~y~~i~~A~a~gD~~~L~~l~Te~~y 131 (236)
.+++.....+||.+||.+.|..++++.+.
T Consensus 25 ~~~~v~~~~~a~~~~D~~~l~~l~a~D~v 53 (163)
T 1z1s_A 25 AKEILVHSLRLLENGDARGWCDLFHPEGV 53 (163)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHTEEEEEE
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHCCCCEE
Confidence 46677888899999999999999998764
No 47
>3g8z_A Protein of unknown function with cystatin-like FO; NP_639274.1, snoal-like polyketide cyclase; HET: MSE; 1.90A {Xanthomonas campestris PV}
Probab=27.55 E-value=30 Score=25.82 Aligned_cols=29 Identities=21% Similarity=0.420 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
..+++.....+|+.+||.+.|..++++.+
T Consensus 21 ~n~~~v~~~~~a~~~gD~~~l~~l~a~D~ 49 (148)
T 3g8z_A 21 NTIDIAKSYITAIQTGDHATLGSIISPDV 49 (148)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred chHHHHHHHHHHHhcCCHHHHHHHcCCCE
Confidence 34677888888999999999999988764
No 48
>2a0b_A HPT domain; sensory transduction, histidine kinase, phosphotransfer, two-component system, four-helix bundle; 1.57A {Escherichia coli} SCOP: a.24.10.1 PDB: 1bdj_B 1fr0_A 1a0b_A
Probab=26.61 E-value=86 Score=22.69 Aligned_cols=29 Identities=10% Similarity=0.116 Sum_probs=24.8
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCHHHHHHh
Q 026572 97 QKFYTEAVDLYKEINTLMANGDKTSLRKA 125 (236)
Q Consensus 97 ~~F~~~A~~~y~~i~~A~a~gD~~~L~~l 125 (236)
..|...+.+....+.+|+.++|.+.++..
T Consensus 34 ~~F~~e~~~~l~~L~~a~~~~d~~~~~~~ 62 (125)
T 2a0b_A 34 AVFEKMMPGYVSVLESNLTAQDKKGIVEE 62 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHcCCHHHHHHH
Confidence 47999999999999999999998876543
No 49
>2gey_A ACLR protein; alpha+beta barrel, oxidoreductase; HET: PG4; 1.80A {Streptomyces galilaeus} SCOP: d.17.4.9
Probab=26.42 E-value=32 Score=25.78 Aligned_cols=28 Identities=18% Similarity=0.084 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
..+++.....+||+++|.+.+..+++++
T Consensus 5 ~~~~~v~~~~~a~~~~D~~~~~~~~a~D 32 (158)
T 2gey_A 5 ERKALCLEMVAAWNRWDLSGIIKHWSPD 32 (158)
T ss_dssp HHHHHHHHHHHHHHTTCTHHHHTTEEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHcCCC
Confidence 4567788888899999999999998764
No 50
>2a15_A Hypothetical protein RV0760C; beta-alpha-barrel, structural genomics, PSI, protein structure initiative; 1.68A {Mycobacterium tuberculosis} SCOP: d.17.4.3 PDB: 2z76_A* 2z77_A* 2z7a_A
Probab=25.14 E-value=45 Score=23.99 Aligned_cols=29 Identities=7% Similarity=0.018 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 102 EAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 102 ~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.++++.....+||+++|.+.+..+.++.+
T Consensus 8 ~~~~~v~~~~~a~~~~D~~~~~~l~a~D~ 36 (139)
T 2a15_A 8 PALIASQSSWRCVQAHDREGWLALMADDV 36 (139)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHhcCCCE
Confidence 35667778888999999999999888774
No 51
>3f8x_A Putative delta-5-3-ketosteroid isomerase; structural genomics, joint center for structural genomics; HET: MSE; 1.55A {Pectobacterium atrosepticum SCRI1043}
Probab=24.30 E-value=13 Score=28.60 Aligned_cols=39 Identities=13% Similarity=0.141 Sum_probs=27.1
Q ss_pred CCCChHhHHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 92 SGYSKQKFYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 92 ~~F~~~~F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
|+-+.....+.++++....++|+..||.+.|..++++.+
T Consensus 11 ~~~~~~~~~~~~~~~l~~f~~a~~~gD~~aL~~LlA~Dv 49 (148)
T 3f8x_A 11 HNIQQTSPNAAVQSGLQEWHRIIAEADWERLPDLLAEDV 49 (148)
T ss_dssp ------CCCHHHHHHHHHHHHHHHHTCGGGSGGGEEEEE
T ss_pred ccccccchhHHHHHHHHHHHHHHHcCCHHHHHHHhCCCE
Confidence 333333445677788899999999999999999887543
No 52
>4h3u_A Hypothetical protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.15A {Catenulispora acidiphila}
Probab=23.37 E-value=21 Score=26.91 Aligned_cols=26 Identities=4% Similarity=0.047 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 105 DLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 105 ~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
++...-.+||+++|.+.+..+++|.+
T Consensus 29 eiv~~y~~A~n~~D~d~~~~l~a~D~ 54 (158)
T 4h3u_A 29 EIVTAWAAAWTGTNPNALGTLFAADG 54 (158)
T ss_dssp HHHHHHHHHHHSSCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHcCCHHHHHHHhcccc
Confidence 46667778999999999999988764
No 53
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=22.53 E-value=2.1e+02 Score=22.62 Aligned_cols=45 Identities=16% Similarity=0.158 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhhH-HHHHHHHHHHHHhhc
Q 026572 99 FYTEAVDLYKEINTLMANGDKTSLRKAVTE-KMYSALKNEIKQRES 143 (236)
Q Consensus 99 F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te-~~y~~l~~~ik~r~~ 143 (236)
..+..++....+.++|..+|.+.....|.. ..+..+..+|++...
T Consensus 130 ~~~~~~~~~~~l~~~~~~~d~~~A~~~~~kL~y~~kl~~~ik~we~ 175 (181)
T 3uo3_A 130 NKERIQDIEAQLGQCYNDKDYAAAVKLTVELKYWYNLAKAFKDWAP 175 (181)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 344455677888999999999998888887 566778888887553
No 54
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=22.40 E-value=49 Score=24.41 Aligned_cols=30 Identities=13% Similarity=0.369 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+.+.++.....+|+.+||.+.|..+.++++
T Consensus 30 ~~i~~~~~~~~~A~~~~D~~~l~~l~a~Da 59 (148)
T 3bb9_A 30 SAAGNVVKQFHAALQMGNEAIVRQSLAANV 59 (148)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHhhCCCe
Confidence 456678888899999999999999988864
No 55
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=22.29 E-value=47 Score=24.77 Aligned_cols=30 Identities=17% Similarity=0.273 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
++.++++....+||.++|.+.|..+.++.+
T Consensus 20 ~~I~~~~~~~~~A~~~~D~~~l~~l~a~Da 49 (156)
T 3h51_A 20 REVAALFDTWNAALATGNPHKVADLYAPDG 49 (156)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHTTEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHhhcCCCE
Confidence 445677888899999999999999887764
No 56
>2owp_A Hypothetical protein BXE_B1374; cystatin-like fold, DUF3225 family protein, structural genom joint center for structural genomics, JCSG; 2.00A {Burkholderia xenovorans} SCOP: d.17.4.18
Probab=21.66 E-value=78 Score=23.30 Aligned_cols=33 Identities=6% Similarity=0.099 Sum_probs=28.3
Q ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 98 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 98 ~F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
.-..+..++|....+|+..+|.+.|..+.++..
T Consensus 8 ~~~~eI~~~~~~y~~Al~~~D~~~L~~lf~~d~ 40 (129)
T 2owp_A 8 DIVAQVQAAFVEYERALVENDIEAMNALFWHTP 40 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHTBCCST
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHhhccCCC
Confidence 445667788999999999999999999998874
No 57
>2f99_A Aklanonic acid methyl ester cyclase, AKNH; anthracycline,polyketide cyclase,stereoselectivity, aklavino biosynthetic protein; HET: AKV; 1.90A {Streptomyces galilaeus} SCOP: d.17.4.9 PDB: 2f98_A*
Probab=21.45 E-value=18 Score=27.14 Aligned_cols=29 Identities=7% Similarity=0.211 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 101 TEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 101 ~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
+..+++.....+||+++|.+.+..++++.
T Consensus 11 ~~~~~~v~~~~~a~~~~d~~~~~~~~a~D 39 (153)
T 2f99_A 11 SEQIAAVRRMVEAYNTGKTDDVADYIHPE 39 (153)
T ss_dssp CHHHHHHHHHHHHHHHCCCTTGGGTEEEE
T ss_pred hHHHHHHHHHHHHHhCCCHHHHHHhcCCC
Confidence 35577788888899999999999887654
No 58
>3us6_A Histidine-containing phosphotransfer protein type MTHPT1; helix bundle, plant hormone signal transduction, cytokinin S transduction; 1.45A {Medicago truncatula}
Probab=21.28 E-value=1e+02 Score=23.58 Aligned_cols=40 Identities=10% Similarity=0.287 Sum_probs=29.5
Q ss_pred HHHHHh---CCCCh---HhHHHHHHHHHHHHHHHHHcC--CHHHHHHh
Q 026572 86 IAKLRK---SGYSK---QKFYTEAVDLYKEINTLMANG--DKTSLRKA 125 (236)
Q Consensus 86 l~~ir~---~~F~~---~~F~~~A~~~y~~i~~A~a~g--D~~~L~~l 125 (236)
|..+.+ |+|-. ..|++.+.+.+..+.+|+.++ |.+.++.+
T Consensus 30 L~~L~~~~~~~~~~ell~~Fl~d~~~~l~~L~~al~~~~~D~~~l~~~ 77 (153)
T 3us6_A 30 LQQLQDENNPEFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKKVDAH 77 (153)
T ss_dssp HHHTCBTTBTTHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHH
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHH
Confidence 444543 55544 469999999999999999998 88876543
No 59
>3ihu_A Transcriptional regulator, GNTR family; YP_298823.1, DNA binding protein, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.92A {Ralstonia eutropha}
Probab=21.22 E-value=2.2e+02 Score=22.46 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHHHHHHH
Q 026572 98 KFYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALK 135 (236)
Q Consensus 98 ~F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~y~~l~ 135 (236)
.......+-+..|.+|+.+||.+..+.++..++-....
T Consensus 177 ~~~~~~~~eH~~I~~Ai~~~d~~~A~~~~~~Hl~~~~~ 214 (222)
T 3ihu_A 177 SLRQMRLDDYRRIATAVLAGEPDAAEAAGAAHVKNVRG 214 (222)
T ss_dssp GGHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 34455567789999999999999999999888765443
No 60
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=21.07 E-value=80 Score=23.55 Aligned_cols=33 Identities=9% Similarity=-0.046 Sum_probs=27.8
Q ss_pred HhHHHHHHHHHHHHHHHHHcCCHHHHHHhhhHH
Q 026572 97 QKFYTEAVDLYKEINTLMANGDKTSLRKAVTEK 129 (236)
Q Consensus 97 ~~F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~ 129 (236)
.+-.++..+++....+|+.++|.+.|..+..+.
T Consensus 6 ~~~~~ei~~~~~~~~~Al~~~D~~~l~~l~~~~ 38 (145)
T 3soy_A 6 STVKQEITEGINRYLYSIDKADPTLGKQLFYVS 38 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHTTTBCCS
T ss_pred hhHHHHHHHHHHHHHHHHHcCCHHHHHHHHhCC
Confidence 345667788999999999999999999998654
No 61
>3flj_A Uncharacterized protein conserved in bacteria WIT cystatin-like fold; YP_168589.1; HET: MSE; 2.00A {Silicibacter pomeroyi dss-3}
Probab=21.05 E-value=10 Score=29.71 Aligned_cols=32 Identities=13% Similarity=0.371 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 99 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 99 F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+.++.+++...-++||++||.+.|..+++|++
T Consensus 16 ~~~~~~~~v~~f~~A~~~gD~~aL~~LlA~Dv 47 (155)
T 3flj_A 16 YFQGMHPTIARMQEVVAKGDESLIHALLAEDV 47 (155)
T ss_dssp TTTTCCHHHHHHHHHHTTTCHHHHHTTEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhCCHHHHHHhcCCCE
Confidence 34556677788889999999999999987654
No 62
>3sxm_A Transcriptional regulator, GNTR family; transcription factor, metal-binding, structur genomics, PSI-2, protein structure initiative; 1.55A {Thermotoga maritima} PDB: 3sxk_A 3sxz_A
Probab=20.85 E-value=2.3e+02 Score=20.08 Aligned_cols=39 Identities=18% Similarity=0.180 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHhhhHHHHHHHHHH
Q 026572 99 FYTEAVDLYKEINTLMANGDKTSLRKAVTEKMYSALKNE 137 (236)
Q Consensus 99 F~~~A~~~y~~i~~A~a~gD~~~L~~l~Te~~y~~l~~~ 137 (236)
....+.+-+..|.+|+.+||.+....++...+-.....-
T Consensus 95 ~~~~~~~eH~~I~~Ai~~~D~~~A~~~~~~Hl~~~~~~~ 133 (140)
T 3sxm_A 95 RYVVSNREHKELIERIISGDKEGAIEKLKEHLKNVEAET 133 (140)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 345666779999999999999999999988876655443
No 63
>3k0z_A Putative polyketide cyclase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS lipoprotein; HET: NHE; 1.91A {Bacillus cereus}
Probab=20.57 E-value=45 Score=25.19 Aligned_cols=27 Identities=19% Similarity=0.319 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHcCCHHHHHHhhhHHH
Q 026572 104 VDLYKEINTLMANGDKTSLRKAVTEKM 130 (236)
Q Consensus 104 ~~~y~~i~~A~a~gD~~~L~~l~Te~~ 130 (236)
+++.....+||++||.+.+..++++.+
T Consensus 37 ~~~v~~~~~a~~~~d~~~l~~~~a~D~ 63 (159)
T 3k0z_A 37 VHAAQRFYAFWDTGKEELIPQTVTENF 63 (159)
T ss_dssp HHHHHHHHHHHHHCCGGGHHHHEEEEE
T ss_pred HHHHHHHHHHHhcCCHHHHHHHcCCCe
Confidence 445666667999999999998887654
No 64
>1yvi_A Histidine-containing phosphotransfer protein; structural genomics, protein structure initiative, PSI, CESG, AK104879, phosphorelay mediator, HP1; 2.00A {Oryza sativa} SCOP: a.24.10.2 PDB: 2q4f_A 1wn0_A
Probab=20.45 E-value=1.1e+02 Score=23.08 Aligned_cols=28 Identities=21% Similarity=0.299 Sum_probs=22.6
Q ss_pred HhHHHHHHHHHHHHHHHHHcC--CHHHHHH
Q 026572 97 QKFYTEAVDLYKEINTLMANG--DKTSLRK 124 (236)
Q Consensus 97 ~~F~~~A~~~y~~i~~A~a~g--D~~~L~~ 124 (236)
..|.+.+...+..+.+|++++ |.+.++.
T Consensus 48 ~~Fl~d~~~~l~~L~~Al~~~~~D~~~l~~ 77 (149)
T 1yvi_A 48 TLFCDDADRIINEIATLLEQPVVNFDKVDA 77 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccHHHHHH
Confidence 358899999999999999987 6766543
Done!