Your job contains 1 sequence.
>026573
MGSQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPIGWNLGFFVNAQ
VKDSFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEEVKAPRKPRV
KLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNAGI
HTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026573
(236 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2129186 - symbol:AT4G17560 species:3702 "Arabi... 467 1.6e-55 2
TAIR|locus:2171609 - symbol:AT5G47190 species:3702 "Arabi... 458 2.9e-52 2
TAIR|locus:2139757 - symbol:AT4G11630 species:3702 "Arabi... 278 2.6e-24 1
TAIR|locus:2181975 - symbol:AT5G11750 species:3702 "Arabi... 275 5.3e-24 1
TAIR|locus:2032457 - symbol:AT1G24240 species:3702 "Arabi... 264 7.8e-23 1
TIGR_CMR|CHY_1428 - symbol:CHY_1428 "ribosomal protein L1... 174 2.7e-13 1
TIGR_CMR|CBU_0442 - symbol:CBU_0442 "ribosomal protein L1... 170 7.1e-13 1
TIGR_CMR|GSU_0648 - symbol:GSU_0648 "ribosomal protein L1... 166 1.9e-12 1
UNIPROTKB|P66080 - symbol:rplS "50S ribosomal protein L19... 157 1.7e-11 1
TIGR_CMR|SPO_3257 - symbol:SPO_3257 "ribosomal protein L1... 157 1.7e-11 1
TIGR_CMR|CJE_0814 - symbol:CJE_0814 "ribosomal protein L1... 152 5.8e-11 1
UNIPROTKB|P0A7K6 - symbol:rplS "50S ribosomal subunit pro... 149 1.2e-10 1
TIGR_CMR|BA_3978 - symbol:BA_3978 "ribosomal protein L19"... 147 2.0e-10 1
UNIPROTKB|Q9KUF7 - symbol:rplS "50S ribosomal protein L19... 142 6.6e-10 1
TIGR_CMR|VC_0564 - symbol:VC_0564 "ribosomal protein L19"... 142 6.6e-10 1
TIGR_CMR|DET_0338 - symbol:DET_0338 "ribosomal protein L1... 141 8.4e-10 1
TIGR_CMR|SO_1360 - symbol:SO_1360 "ribosomal protein L19"... 136 2.9e-09 1
TIGR_CMR|ECH_0004 - symbol:ECH_0004 "ribosomal protein L1... 128 2.0e-08 1
TIGR_CMR|NSE_0895 - symbol:NSE_0895 "ribosomal protein L1... 127 2.6e-08 1
MGI|MGI:1926274 - symbol:Mrpl19 "mitochondrial ribosomal ... 131 3.3e-08 1
RGD|1587381 - symbol:Mrpl19 "mitochondrial ribosomal prot... 131 3.3e-08 1
TIGR_CMR|APH_1266 - symbol:APH_1266 "ribosomal protein L1... 121 1.1e-07 1
TIGR_CMR|CPS_4066 - symbol:CPS_4066 "ribosomal protein L1... 120 1.4e-07 1
UNIPROTKB|I3LNJ0 - symbol:MRPL19 "Uncharacterized protein... 124 9.9e-07 1
UNIPROTKB|F1MMM8 - symbol:MRPL19 "39S ribosomal protein L... 123 1.8e-06 1
UNIPROTKB|Q2HJI0 - symbol:MRPL19 "39S ribosomal protein L... 123 1.8e-06 1
UNIPROTKB|P49406 - symbol:MRPL19 "39S ribosomal protein L... 123 1.8e-06 1
ZFIN|ZDB-GENE-040801-55 - symbol:mrpl19 "mitochondrial ri... 117 1.8e-05 1
UNIPROTKB|E2R077 - symbol:MRPL19 "Uncharacterized protein... 113 6.5e-05 1
UNIPROTKB|F1NEW6 - symbol:MRPL19 "Uncharacterized protein... 109 0.00017 1
FB|FBgn0037608 - symbol:mRpL19 "mitochondrial ribosomal p... 110 0.00018 1
>TAIR|locus:2129186 [details] [associations]
symbol:AT4G17560 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0019288
"isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015
GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0005840 GO:GO:0003735 EMBL:Z97343
GO:GO:0019843 EMBL:AL161546 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 EMBL:AY062821 EMBL:AY081625
EMBL:AY086121 IPI:IPI00545108 PIR:C71445 RefSeq:NP_567531.1
UniGene:At.27419 ProteinModelPortal:Q8W463 SMR:Q8W463 STRING:Q8W463
PaxDb:Q8W463 PRIDE:Q8W463 EnsemblPlants:AT4G17560.1 GeneID:827471
KEGG:ath:AT4G17560 TAIR:At4g17560 HOGENOM:HOG000016266
InParanoid:Q8W463 OMA:VHTTIRV PhylomeDB:Q8W463
ProtClustDB:CLSN2689487 Genevestigator:Q8W463 GermOnline:AT4G17560
TIGRFAMs:TIGR01024 Uniprot:Q8W463
Length = 225
Score = 467 (169.5 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 90/121 (74%), Positives = 101/121 (83%)
Query: 116 RKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSR 175
RKPR+KLGD+MGILN++A+E +E RP+P+IRTGD+VEIKLEVPEN+RRLSIYKGIVMSR
Sbjct: 105 RKPRIKLGDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSR 164
Query: 176 QNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
QN VEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF
Sbjct: 165 QNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 224
Query: 236 K 236
K
Sbjct: 225 K 225
Score = 123 (48.4 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 30/66 (45%), Positives = 41/66 (62%)
Query: 6 LPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPI---GWNLGFFVNAQVK 62
LPQALH IPR+ TQ SK LGFS+ LS P + +SVS + G GF ++ +V+
Sbjct: 8 LPQALHMIPRNPTQS--SKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSLDTRVR 65
Query: 63 DSFVVR 68
+ F+VR
Sbjct: 66 NEFIVR 71
>TAIR|locus:2171609 [details] [associations]
symbol:AT5G47190 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISS] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009570 GO:GO:0016020
GO:GO:0006412 GO:GO:0009941 GO:GO:0005840 GO:GO:0003735
GO:GO:0019843 EMBL:AB018117 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 HOGENOM:HOG000016266
ProtClustDB:CLSN2689487 TIGRFAMs:TIGR01024 EMBL:AY080626
EMBL:AY117181 EMBL:AY086970 IPI:IPI00525994 RefSeq:NP_568677.1
UniGene:At.29908 ProteinModelPortal:Q8RXX5 SMR:Q8RXX5 STRING:Q8RXX5
PaxDb:Q8RXX5 PRIDE:Q8RXX5 EnsemblPlants:AT5G47190.1 GeneID:834765
KEGG:ath:AT5G47190 GeneFarm:194 TAIR:At5g47190 InParanoid:Q8RXX5
OMA:DIMGLLN PhylomeDB:Q8RXX5 Genevestigator:Q8RXX5
GermOnline:AT5G47190 Uniprot:Q8RXX5
Length = 229
Score = 458 (166.3 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 90/122 (73%), Positives = 100/122 (81%)
Query: 115 PRKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMS 174
P K RVKLGDIMG+LNK+A+E +E+ RP+P +RTGD+VEIKLEVPEN+RRLSIYKGIVMS
Sbjct: 108 PWKTRVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMS 167
Query: 175 RQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLST 234
RQN VEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLST
Sbjct: 168 RQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLST 227
Query: 235 FK 236
FK
Sbjct: 228 FK 229
Score = 101 (40.6 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 26/69 (37%), Positives = 39/69 (56%)
Query: 3 SQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPIGW---NLGFFVNA 59
S +LPQALH IPR T SK LG S++L R V+ +SVS + N GF +++
Sbjct: 5 SHLLPQALHMIPR--TPSFSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 62
Query: 60 QVKDSFVVR 68
+ + F+ +
Sbjct: 63 KKRKEFIAK 71
>TAIR|locus:2139757 [details] [associations]
symbol:AT4G11630 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL161532
EMBL:AL049500 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 HOGENOM:HOG000016266 TIGRFAMs:TIGR01024
UniGene:At.33552 ProtClustDB:CLSN2685510 EMBL:BT012188
EMBL:AK221452 IPI:IPI00535492 PIR:T04210 RefSeq:NP_192900.1
ProteinModelPortal:Q9T0D0 SMR:Q9T0D0 STRING:Q9T0D0
EnsemblPlants:AT4G11630.1 GeneID:826768 KEGG:ath:AT4G11630
TAIR:At4g11630 InParanoid:Q9T0D0 OMA:CGSWSEN PhylomeDB:Q9T0D0
Genevestigator:Q9T0D0 Uniprot:Q9T0D0
Length = 225
Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 56/108 (51%), Positives = 76/108 (70%)
Query: 125 IMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXX 184
IM I++K AVE S R IP+I+ G +V++K+EVPEN+RR+SI KG+V++R+N
Sbjct: 115 IMQIVDKEAVEEVRSLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTF 174
Query: 185 XXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 232
VE +FPLYSPN++EIKVV +KVRRA+LYYLRDK+ L
Sbjct: 175 RIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLRDKVNAL 222
>TAIR|locus:2181975 [details] [associations]
symbol:AT5G11750 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR001857 Pfam:PF01245
PRINTS:PR00061 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AL163814
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
HOGENOM:HOG000016266 TIGRFAMs:TIGR01024 ProtClustDB:CLSN2685510
EMBL:AF375449 EMBL:AY060543 IPI:IPI00521915 PIR:T48534
RefSeq:NP_196736.1 UniGene:At.27374 ProteinModelPortal:Q9LYF5
SMR:Q9LYF5 STRING:Q9LYF5 EnsemblPlants:AT5G11750.1 GeneID:831047
KEGG:ath:AT5G11750 TAIR:At5g11750 InParanoid:Q9LYF5
PhylomeDB:Q9LYF5 Genevestigator:Q9LYF5 Uniprot:Q9LYF5
Length = 229
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 55/108 (50%), Positives = 76/108 (70%)
Query: 125 IMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXX 184
IM I++K AVE + R IP+I+ G +V++K+EVPEN+RR+SI KG+V++R+N
Sbjct: 119 IMQIVDKEAVEEVRNLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTF 178
Query: 185 XXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 232
VE +FPLYSPN++EIKVV +KVRRA+LYYLRDK+ L
Sbjct: 179 RIRRLVAGVGVESMFPLYSPNLREIKVVDKKKVRRAKLYYLRDKVNAL 226
>TAIR|locus:2032457 [details] [associations]
symbol:AT1G24240 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC002396 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 HOGENOM:HOG000016266
TIGRFAMs:TIGR01024 EMBL:AY044318 EMBL:AY049255 EMBL:AY090278
IPI:IPI00541442 PIR:T00654 RefSeq:NP_564213.1 UniGene:At.33552
UniGene:At.62626 ProteinModelPortal:O48691 SMR:O48691 STRING:O48691
EnsemblPlants:AT1G24240.1 GeneID:839038 KEGG:ath:AT1G24240
TAIR:At1g24240 InParanoid:O48691 PhylomeDB:O48691
ProtClustDB:CLSN2685510 Genevestigator:O48691 Uniprot:O48691
Length = 222
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 53/108 (49%), Positives = 75/108 (69%)
Query: 125 IMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXX 184
IM I++K AVE + R IP+I+ G +V++K+EVPEN+RR+SI KG+V++R+N
Sbjct: 112 IMQIVDKEAVEEVRTLREIPEIKPGYIVQLKVEVPENKRRVSIVKGVVIARRNAGLNSTF 171
Query: 185 XXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 232
VE +FPLYSPN++ IKVV +KVRRA+LYYLR+K+ L
Sbjct: 172 RIRRLVAGVGVESMFPLYSPNLRVIKVVDKKKVRRAKLYYLREKVNAL 219
>TIGR_CMR|CHY_1428 [details] [associations]
symbol:CHY_1428 "ribosomal protein L19" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257
Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR
ProtClustDB:PRK05338 HOGENOM:HOG000016264 RefSeq:YP_360260.1
ProteinModelPortal:Q3AC74 SMR:Q3AC74 STRING:Q3AC74 GeneID:3728543
KEGG:chy:CHY_1428 PATRIC:21275987
BioCyc:CHYD246194:GJCN-1427-MONOMER Uniprot:Q3AC74
Length = 113
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 35/96 (36%), Positives = 56/96 (58%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXX 190
+++E + + +P+ R GD V++ +V E NR R+ Y+G+V+ ++
Sbjct: 5 KSLEEEQLRKDLPEFRPGDTVKVYFKVIEGNRERIQPYEGVVIRKRGSGLSATFTVRRVS 64
Query: 191 XXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
VE FPL+SP I++I+V+ KVRRARLYYLR
Sbjct: 65 YGIGVERTFPLHSPRIEKIEVIRRGKVRRARLYYLR 100
>TIGR_CMR|CBU_0442 [details] [associations]
symbol:CBU_0442 "ribosomal protein L19" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] HAMAP:MF_00402 InterPro:IPR001857
InterPro:IPR018257 Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0006412 GO:GO:0005840 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680 TIGRFAMs:TIGR01024
KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338 HOGENOM:HOG000016264
RefSeq:NP_819479.1 ProteinModelPortal:Q83E85 SMR:Q83E85
GeneID:1208326 KEGG:cbu:CBU_0442 PATRIC:17929575
BioCyc:CBUR227377:GJ7S-440-MONOMER Uniprot:Q83E85
Length = 115
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 40/105 (38%), Positives = 59/105 (56%)
Query: 134 VEASESE-RPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXX 191
+E +++ + IPD R GD V ++++V E NR RL ++G+V++R++
Sbjct: 8 LETEQTQGKEIPDFRAGDTVTVQVKVKEGNRERLQAFEGVVIARRHRGLNSSFTVRKVSH 67
Query: 192 XXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
VE VF LYSP I IKV VRRA+LYYLR+ R + K
Sbjct: 68 GEGVERVFQLYSPLIASIKVNRRGDVRRAKLYYLRNLRGRKAKIK 112
>TIGR_CMR|GSU_0648 [details] [associations]
symbol:GSU_0648 "ribosomal protein L19" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:NP_951705.1 ProteinModelPortal:Q74FG1
SMR:Q74FG1 GeneID:2687158 KEGG:gsu:GSU0648 PATRIC:22024043
BioCyc:GSUL243231:GH27-658-MONOMER Uniprot:Q74FG1
Length = 118
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/100 (34%), Positives = 59/100 (59%)
Query: 129 LNK-RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXX 186
+NK A+E + ++ IP + GD +++ +++ E ++ R+ ++G+ +SRQN
Sbjct: 1 MNKIDAIELEQMKKNIPPFKPGDTLKVHVKIVEGDKSRIQAFQGVCISRQNGGIRESFTV 60
Query: 187 XXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
VE VFPL+SP + I+V++ VRRA+LYYLR
Sbjct: 61 RKISNNIGVERVFPLHSPTVDAIEVITRGHVRRAKLYYLR 100
>UNIPROTKB|P66080 [details] [associations]
symbol:rplS "50S ribosomal protein L19" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:BX842581 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 TIGRFAMs:TIGR01024 HOGENOM:HOG000016265 KO:K02884
OMA:TLKVHVR ProtClustDB:PRK05338 PIR:C70927 RefSeq:NP_217420.1
RefSeq:NP_337484.1 RefSeq:YP_006516357.1 ProteinModelPortal:P66080
SMR:P66080 PRIDE:P66080 EnsemblBacteria:EBMYCT00000003311
EnsemblBacteria:EBMYCT00000069725 GeneID:13317697 GeneID:887356
GeneID:925306 KEGG:mtc:MT2972 KEGG:mtu:Rv2904c KEGG:mtv:RVBD_2904c
PATRIC:18128304 TubercuList:Rv2904c Uniprot:P66080
Length = 113
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 143 IPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPL 201
IP GD + + ++V E + RL ++KG+V+ RQ VE FP+
Sbjct: 16 IPAFNPGDTINVHVKVIEGAKERLQVFKGVVIRRQGGGIRETFTVRKESYGVGVERTFPV 75
Query: 202 YSPNIKEIKVVSHRKVRRARLYYLRD 227
+SPNI I+VV+ VRRA+LYYLR+
Sbjct: 76 HSPNIDHIEVVTRGDVRRAKLYYLRE 101
>TIGR_CMR|SPO_3257 [details] [associations]
symbol:SPO_3257 "ribosomal protein L19" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 OMA:EAKRTLP RefSeq:YP_168460.1
ProteinModelPortal:Q5LNE8 GeneID:3195464 KEGG:sil:SPO3257
PATRIC:23379959 Uniprot:Q5LNE8
Length = 127
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 36/88 (40%), Positives = 48/88 (54%)
Query: 141 RPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXX-VEIV 198
+ IPD + GD + + +V E R R+ Y+G+ +SR+N VE V
Sbjct: 17 KDIPDFKAGDTIRVGYKVTEGTRSRVQNYEGVCISRKNGSGIAGSFTVRKISFGEGVERV 76
Query: 199 FPLYSPNIKEIKVVSHRKVRRARLYYLR 226
FPLYS NI I VV +VRRA+LYYLR
Sbjct: 77 FPLYSTNIDSITVVRRGRVRRAKLYYLR 104
>TIGR_CMR|CJE_0814 [details] [associations]
symbol:CJE_0814 "ribosomal protein L19" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
RefSeq:YP_178818.1 ProteinModelPortal:Q5HV67 STRING:Q5HV67
GeneID:3230764 KEGG:cjr:CJE0814 PATRIC:20043373
HOGENOM:HOG000016264 BioCyc:CJEJ195099:GJC0-829-MONOMER
Uniprot:Q5HV67
Length = 118
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 33/105 (31%), Positives = 60/105 (57%)
Query: 135 EASESE-RPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQ-NXXXXXXXXXXXXXX 191
EA + E + +PD R GD +++ + + E ++ R+ ++GI ++R+ N
Sbjct: 10 EAKQIEGKNVPDFRAGDTLKLAIRIKEGDKTRIQNFEGICIARRGNGVSETFIVRKIGAN 69
Query: 192 XXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
VE +FP+YS +++ I V+ +VRRARL+YLRD+ + + K
Sbjct: 70 NVGVERIFPIYSESLESITVLRRGRVRRARLFYLRDRRGKAARIK 114
>UNIPROTKB|P0A7K6 [details] [associations]
symbol:rplS "50S ribosomal subunit protein L19"
species:83333 "Escherichia coli K-12" [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0019843 PDB:2VHM
PDBsum:2VHM PDB:2RDO PDBsum:2RDO InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 EMBL:X01818 TIGRFAMs:TIGR01024
PDB:3J0T PDB:3J0W PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF
PDB:3UOS PDBsum:3J0T PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11
PDBsum:3J12 PDBsum:3J14 PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86
PDB:1VS6 PDB:1VS8 PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC
PDB:2I2T PDB:2I2V PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC
PDB:2QBE PDB:2QBG PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ
PDB:2QP1 PDB:2VHN PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4
PDB:3E1B PDB:3E1D PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T
PDB:3I20 PDB:3I22 PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR
PDB:3OAS PDB:3OAT PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ
PDB:3OG0 PDB:3ORB PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85
PDBsum:1P86 PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4
PDBsum:2AWB PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V
PDBsum:2J28 PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC
PDBsum:2QBE PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV
PDBsum:2QOX PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ
PDBsum:2Z4L PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B
PDBsum:3E1D PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R
PDBsum:3I1T PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU
PDBsum:3J01 PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT
PDBsum:3OFC PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ
PDBsum:3OG0 PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR
PDBsum:4GAU PDB:3BBX PDBsum:3BBX KO:K02884 OMA:TLKVHVR
ProtClustDB:PRK05338 HOGENOM:HOG000016264 PIR:S07951
RefSeq:NP_417097.1 RefSeq:YP_490829.1 ProteinModelPortal:P0A7K6
SMR:P0A7K6 DIP:DIP-35793N IntAct:P0A7K6 MINT:MINT-1245288
PhosSite:P0810432 PaxDb:P0A7K6 PRIDE:P0A7K6
EnsemblBacteria:EBESCT00000002329 EnsemblBacteria:EBESCT00000018082
GeneID:12931612 GeneID:947096 KEGG:ecj:Y75_p2554 KEGG:eco:b2606
PATRIC:32120611 EchoBASE:EB0873 EcoGene:EG10880
BioCyc:EcoCyc:EG10880-MONOMER BioCyc:ECOL316407:JW2587-MONOMER
EvolutionaryTrace:P0A7K6 Genevestigator:P0A7K6 Uniprot:P0A7K6
Length = 115
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/106 (30%), Positives = 57/106 (53%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXX 190
+ +E + ++ +P R GD VE+K+ V E +++RL ++G+V++ +N
Sbjct: 6 KQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKIS 65
Query: 191 XXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
VE VF +SP + I V VR+A+LYYLR++ + + K
Sbjct: 66 NGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIK 111
>TIGR_CMR|BA_3978 [details] [associations]
symbol:BA_3978 "ribosomal protein L19" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 TIGRFAMs:TIGR01024
RefSeq:NP_846220.1 RefSeq:YP_020617.1 RefSeq:YP_029942.1
ProteinModelPortal:Q81WJ6 SMR:Q81WJ6 DNASU:1086794
EnsemblBacteria:EBBACT00000009389 EnsemblBacteria:EBBACT00000014058
EnsemblBacteria:EBBACT00000023738 GeneID:1086794 GeneID:2820046
GeneID:2848344 KEGG:ban:BA_3978 KEGG:bar:GBAA_3978 KEGG:bat:BAS3691
HOGENOM:HOG000016265 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
BioCyc:BANT260799:GJAJ-3749-MONOMER
BioCyc:BANT261594:GJ7F-3866-MONOMER Uniprot:Q81WJ6
Length = 114
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 29/86 (33%), Positives = 49/86 (56%)
Query: 143 IPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPL 201
+P R GD + + ++V E R R+ +++G+V+ R+ VE FP+
Sbjct: 17 LPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPV 76
Query: 202 YSPNIKEIKVVSHRKVRRARLYYLRD 227
++P I +I+V+ KVRRA+LYYLR+
Sbjct: 77 HTPRIAKIEVLRRGKVRRAKLYYLRN 102
>UNIPROTKB|Q9KUF7 [details] [associations]
symbol:rplS "50S ribosomal protein L19" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] HAMAP:MF_00402 InterPro:IPR001857
InterPro:IPR018257 Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
PIR:D82307 RefSeq:NP_230215.1 ProteinModelPortal:Q9KUF7 SMR:Q9KUF7
DNASU:2615241 GeneID:2615241 KEGG:vch:VC0564 PATRIC:20080246
Uniprot:Q9KUF7
Length = 117
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXX 190
+A+E + ++ +P GD V ++++V E +R RL ++GIV++ +N
Sbjct: 6 KALEQEQMKQDLPQFAPGDTVVVQVKVKEGDRERLQAFEGIVIAIRNRGLHSAFTVRKIS 65
Query: 191 XXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 227
VE F +SP + I+V VRRA+LYYLRD
Sbjct: 66 NGEGVERTFQTHSPVVDSIEVKRRGAVRRAKLYYLRD 102
>TIGR_CMR|VC_0564 [details] [associations]
symbol:VC_0564 "ribosomal protein L19" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
PIR:D82307 RefSeq:NP_230215.1 ProteinModelPortal:Q9KUF7 SMR:Q9KUF7
DNASU:2615241 GeneID:2615241 KEGG:vch:VC0564 PATRIC:20080246
Uniprot:Q9KUF7
Length = 117
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 32/97 (32%), Positives = 52/97 (53%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXX 190
+A+E + ++ +P GD V ++++V E +R RL ++GIV++ +N
Sbjct: 6 KALEQEQMKQDLPQFAPGDTVVVQVKVKEGDRERLQAFEGIVIAIRNRGLHSAFTVRKIS 65
Query: 191 XXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 227
VE F +SP + I+V VRRA+LYYLRD
Sbjct: 66 NGEGVERTFQTHSPVVDSIEVKRRGAVRRAKLYYLRD 102
>TIGR_CMR|DET_0338 [details] [associations]
symbol:DET_0338 "ribosomal protein L19" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:YP_181085.1 ProteinModelPortal:Q3Z9L4
STRING:Q3Z9L4 GeneID:3230381 KEGG:det:DET0338 PATRIC:21607745
BioCyc:DETH243164:GJNF-338-MONOMER Uniprot:Q3Z9L4
Length = 136
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 27/95 (28%), Positives = 51/95 (53%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXX 191
AVE + + + +P GD +++ + E ++ R+ +++G+V+ +
Sbjct: 25 AVENTAAGKVLPSFGPGDTIKVHARIKEGDKERIQMFQGVVLKVKQAADGGNFTVRRISY 84
Query: 192 XXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
VE FP SPN+ +++V+ +VRRARL+YLR
Sbjct: 85 GVGVERTFPFLSPNVTKVEVIKRGRVRRARLFYLR 119
>TIGR_CMR|SO_1360 [details] [associations]
symbol:SO_1360 "ribosomal protein L19" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:NP_716980.1 ProteinModelPortal:Q8EH70
SMR:Q8EH70 GeneID:1169181 KEGG:son:SO_1360 PATRIC:23522374
Uniprot:Q8EH70
Length = 117
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 138 ESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVE 196
+ ++ +P GD V +++ V E ++ RL ++G+V++++N VE
Sbjct: 12 QMKQDVPAFGAGDTVVVQVRVKEGDKERLQAFEGVVIAKRNRGLHSAFTVRKISNGEGVE 71
Query: 197 IVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 228
F +SP I I+V +VRRA+LYYLRD+
Sbjct: 72 RAFQTHSPLIASIEVKRRGRVRRAKLYYLRDR 103
>TIGR_CMR|ECH_0004 [details] [associations]
symbol:ECH_0004 "ribosomal protein L19" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
HAMAP:MF_00402 InterPro:IPR001857 Pfam:PF01245 PIRSF:PIRSF002191
PRINTS:PR00061 PROSITE:PS01015 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:YP_506839.1 ProteinModelPortal:Q2GI94
STRING:Q2GI94 GeneID:3927864 KEGG:ech:ECH_0004 PATRIC:20575581
OMA:EAKRTLP BioCyc:ECHA205920:GJNR-4-MONOMER Uniprot:Q2GI94
Length = 125
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 25/105 (23%), Positives = 56/105 (53%)
Query: 122 LGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXX 180
+ D++ N++ ++ S + IP +GD + + +++ + RL +++G+ + R+N
Sbjct: 1 MSDLLKEFNEQQMKLL-SNKEIPKFSSGDTLRVSMKIFDGVSERLQVFEGVCIKRKNNGL 59
Query: 181 XXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYL 225
+++ LYSP ++ I+V+ +VRRA+LYY+
Sbjct: 60 HSSFTLRKISYNESIQLQVFLYSPIVESIEVIKFGRVRRAKLYYM 104
>TIGR_CMR|NSE_0895 [details] [associations]
symbol:NSE_0895 "ribosomal protein L19" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 ProtClustDB:PRK05338
HOGENOM:HOG000016264 OMA:EAKRTLP RefSeq:YP_506761.1
ProteinModelPortal:Q2GCN5 STRING:Q2GCN5 GeneID:3931562
KEGG:nse:NSE_0895 PATRIC:22681781
BioCyc:NSEN222891:GHFU-898-MONOMER Uniprot:Q2GCN5
Length = 120
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 36/105 (34%), Positives = 49/105 (46%)
Query: 126 MGILNK--RAVEASESE-RPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXX 182
MGIL K A + SE R P+ R G + ++ V R ++KG+ + + N
Sbjct: 1 MGILAKFNEAQRKALSEGRNYPEFRAGYTMSVEFYVQGTSGRTQVFKGLCIGKSNKGVHS 60
Query: 183 XXXXXXXXXXXX-VEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
VE F LY P+IK I V KVRRA+LYY+R
Sbjct: 61 SFTLRKLSVHDVYVERTFRLYWPSIKSISVEREGKVRRAKLYYIR 105
>MGI|MGI:1926274 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10090 "Mus musculus" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005761 "mitochondrial ribosome" evidence=ISS]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=ISO] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 PROSITE:PS01015 MGI:MGI:1926274
GO:GO:0006412 GO:GO:0031965 GO:GO:0003735 GO:GO:0005761
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CTD:9801 HOVERGEN:HBG023932 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AK018508
EMBL:AK050637 EMBL:BC020315 EMBL:BC043921 IPI:IPI00989172
RefSeq:NP_080766.1 UniGene:Mm.276293 ProteinModelPortal:Q9D338
SMR:Q9D338 STRING:Q9D338 PhosphoSite:Q9D338 PaxDb:Q9D338
PRIDE:Q9D338 Ensembl:ENSMUST00000032124 GeneID:56284 KEGG:mmu:56284
UCSC:uc009clf.1 InParanoid:Q9D338 NextBio:312188 Bgee:Q9D338
CleanEx:MM_MRPL19 Genevestigator:Q9D338
GermOnline:ENSMUSG00000030045 Uniprot:Q9D338
Length = 292
Score = 131 (51.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 32/94 (34%), Positives = 42/94 (44%)
Query: 142 PIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPL 201
PIP+ G ++ + P + S + GI + R VEI F L
Sbjct: 107 PIPEFYVGSILRVTTADPYASGKTSQFLGICIKRSGNGLGATFTLRNTIEGQGVEICFEL 166
Query: 202 YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
Y+P I+EI+VV K L YLRD LP STF
Sbjct: 167 YNPRIQEIQVVKLEKRLDDNLLYLRDALPEYSTF 200
>RGD|1587381 [details] [associations]
symbol:Mrpl19 "mitochondrial ribosomal protein L19"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA;ISO]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 RGD:1587381
GO:GO:0005739 GO:GO:0006412 GO:GO:0031965 GO:GO:0005840
GO:GO:0003735 EMBL:CH473957 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR15680 CTD:9801 OrthoDB:EOG4G4GR6
GeneTree:ENSGT00390000009415 IPI:IPI00190232 RefSeq:NP_001025069.1
UniGene:Rn.3438 Ensembl:ENSRNOT00000009308 GeneID:297372
KEGG:rno:297372 UCSC:RGD:1587381 Uniprot:D4A4A9
Length = 292
Score = 131 (51.2 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 35/118 (29%), Positives = 49/118 (41%)
Query: 118 PRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQN 177
PR + + + +R + PIP+ G ++ + P + S + GI + R
Sbjct: 83 PRGRTNPLKFQIERRDMLDRRKVLPIPEFYVGSILRVTTADPYASGKTSQFLGICIKRSG 142
Query: 178 XXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
VEI F LY+P I EI+VV K L YLRD LP STF
Sbjct: 143 SGLGATFTLRNTIEGQGVEICFELYNPRIHEIQVVKLEKRLDDSLLYLRDALPEYSTF 200
>TIGR_CMR|APH_1266 [details] [associations]
symbol:APH_1266 "ribosomal protein L19" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001857 Pfam:PF01245 PIRSF:PIRSF002191 PRINTS:PR00061
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG0335 PANTHER:PTHR15680 TIGRFAMs:TIGR01024 KO:K02884
OMA:TLKVHVR ProtClustDB:PRK05338 HOGENOM:HOG000016264
RefSeq:YP_505785.1 ProteinModelPortal:Q2GIL6 STRING:Q2GIL6
GeneID:3931108 KEGG:aph:APH_1266 PATRIC:20951322
BioCyc:APHA212042:GHPM-1269-MONOMER Uniprot:Q2GIL6
Length = 128
Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 143 IPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPL 201
IP+ R GD V++ + V + R+ ++G+ + ++N +++
Sbjct: 24 IPEFRPGDTVKVNINVFDGVGWRIQTFEGVCIKKRNRGLHSSFTLRKISHNESIQLQVFT 83
Query: 202 YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
+SPN+K +++V KVRRA+LYYL + + + K
Sbjct: 84 HSPNLKSVELVRTGKVRRAKLYYLLELFGKAARIK 118
>TIGR_CMR|CPS_4066 [details] [associations]
symbol:CPS_4066 "ribosomal protein L19" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] HAMAP:MF_00402
InterPro:IPR001857 InterPro:IPR018257 Pfam:PF01245
PIRSF:PIRSF002191 PRINTS:PR00061 PROSITE:PS01015 GO:GO:0006412
GO:GO:0005840 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
TIGRFAMs:TIGR01024 KO:K02884 OMA:TLKVHVR ProtClustDB:PRK05338
HOGENOM:HOG000016264 RefSeq:YP_270721.1 ProteinModelPortal:Q47WV1
SMR:Q47WV1 STRING:Q47WV1 GeneID:3521778 KEGG:cps:CPS_4066
PATRIC:21471007 BioCyc:CPSY167879:GI48-4079-MONOMER Uniprot:Q47WV1
Length = 117
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/104 (27%), Positives = 53/104 (50%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXX 192
+E + + +P GD V ++++V E ++ RL ++G+V++ ++
Sbjct: 8 LEQEQMKTDLPAFAPGDTVVVQVKVTEADKSRLQAFEGVVIAVKSRGLHSAFTVRKISNG 67
Query: 193 XXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
VE VF +SP + I+V VR+A+LYYLR+ R + K
Sbjct: 68 VGVERVFQTHSPIVDSIEVKRRGDVRQAKLYYLRELSGRKARIK 111
>UNIPROTKB|I3LNJ0 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:FP326655
RefSeq:XP_003354803.1 Ensembl:ENSSSCT00000023158 GeneID:100625069
KEGG:ssc:100625069 Uniprot:I3LNJ0
Length = 292
Score = 124 (48.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 31/93 (33%), Positives = 41/93 (44%)
Query: 143 IPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLY 202
IP+ G ++ + P + S + GI + R VEI F LY
Sbjct: 108 IPEFYVGSILRVTTADPYASAKTSQFLGICIQRSGSGLGATFILRNTIEGQGVEICFELY 167
Query: 203 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
+P I+EI+VV K L YLRD LP STF
Sbjct: 168 NPRIQEIQVVKLEKRLDNSLLYLRDALPEYSTF 200
>UNIPROTKB|F1MMM8 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
IPI:IPI00715557 UniGene:Bt.55433 GeneTree:ENSGT00390000009415
OMA:KRWERPN EMBL:DAAA02031026 Ensembl:ENSBTAT00000003312
Uniprot:F1MMM8
Length = 292
Score = 123 (48.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/93 (33%), Positives = 41/93 (44%)
Query: 143 IPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLY 202
IP+ G ++ + P + S + GI + R VEI F LY
Sbjct: 108 IPEFYVGSILRVTTADPYANGKTSQFLGICIQRSGKGLGATFILRNTIEGQGVEICFELY 167
Query: 203 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
+P I+EI+VV K L YLRD LP STF
Sbjct: 168 NPRIQEIQVVKLEKRLDDSLLYLRDALPEYSTF 200
>UNIPROTKB|Q2HJI0 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9913 "Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
PROSITE:PS01015 GO:GO:0005739 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335
PANTHER:PTHR15680 PDB:2FTC PDBsum:2FTC EMBL:BC105368
IPI:IPI00715557 RefSeq:NP_001039533.1 UniGene:Bt.55433
ProteinModelPortal:Q2HJI0 STRING:Q2HJI0 PRIDE:Q2HJI0 GeneID:510957
KEGG:bta:510957 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
InParanoid:Q2HJI0 OrthoDB:EOG4G4GR6 EvolutionaryTrace:Q2HJI0
NextBio:20869701 Uniprot:Q2HJI0
Length = 292
Score = 123 (48.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 31/93 (33%), Positives = 41/93 (44%)
Query: 143 IPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLY 202
IP+ G ++ + P + S + GI + R VEI F LY
Sbjct: 108 IPEFYVGSILRVTTADPYANGKTSQFLGICIQRSGKGLGATFILRNTIEGQGVEICFELY 167
Query: 203 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
+P I+EI+VV K L YLRD LP STF
Sbjct: 168 NPRIQEIQVVKLEKRLDDSLLYLRDALPEYSTF 200
>UNIPROTKB|P49406 [details] [associations]
symbol:MRPL19 "39S ribosomal protein L19, mitochondrial"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IDA] InterPro:IPR001857 Pfam:PF01245
PRINTS:PR00061 PROSITE:PS01015 EMBL:AC005034 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG0335 PANTHER:PTHR15680
CleanEx:HS_MRPL15 CTD:9801 HOGENOM:HOG000020439 HOVERGEN:HBG023932
OrthoDB:EOG4G4GR6 EMBL:BC030144 EMBL:D14660 EMBL:AB051621
IPI:IPI00027096 RefSeq:NP_055578.2 UniGene:Hs.44024
ProteinModelPortal:P49406 SMR:P49406 IntAct:P49406
MINT:MINT-6492165 STRING:P49406 PhosphoSite:P49406 DMDM:92090636
PaxDb:P49406 PRIDE:P49406 DNASU:9801 Ensembl:ENST00000393909
Ensembl:ENST00000409374 GeneID:9801 KEGG:hsa:9801 UCSC:uc002snl.3
GeneCards:GC02P075873 HGNC:HGNC:14052 MIM:611832 neXtProt:NX_P49406
PharmGKB:PA30948 InParanoid:P49406 OMA:KRWERPN ChiTaRS:MRPL19
GenomeRNAi:9801 NextBio:36904 ArrayExpress:P49406 Bgee:P49406
CleanEx:HS_MRPL19 Genevestigator:P49406 Uniprot:P49406
Length = 292
Score = 123 (48.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 30/93 (32%), Positives = 42/93 (45%)
Query: 143 IPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLY 202
IP+ G ++ + P ++S + GI + R VEI F LY
Sbjct: 108 IPEFYVGSILRVTTADPYASGKISQFLGICIQRSGRGLGATFILRNVIEGQGVEICFELY 167
Query: 203 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
+P ++EI+VV K L YLRD LP STF
Sbjct: 168 NPRVQEIQVVKLEKRLDDSLLYLRDALPEYSTF 200
>ZFIN|ZDB-GENE-040801-55 [details] [associations]
symbol:mrpl19 "mitochondrial ribosomal protein L19"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061
ZFIN:ZDB-GENE-040801-55 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:BX322665 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 IPI:IPI00490324
Ensembl:ENSDART00000124388 ArrayExpress:F1R7V6 Bgee:F1R7V6
Uniprot:F1R7V6
Length = 291
Score = 117 (46.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/118 (26%), Positives = 49/118 (41%)
Query: 118 PRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQN 177
PR + I + ++ + IP+ G ++ + + P L+ + GI R
Sbjct: 82 PRQRTDQIKFYIERKDMIQRRKVLQIPEFYVGSILAVTMTDPYASGNLNRFVGICTQRSG 141
Query: 178 XXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
VEI + LYSP +++I+V+ K L YLRD LP STF
Sbjct: 142 KGLGATFILRNVIDGQGVEICYELYSPRMRKIEVLKLEKRLDDNLMYLRDALPEYSTF 199
>UNIPROTKB|E2R077 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001857
Pfam:PF01245 PRINTS:PR00061 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
CTD:9801 GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AAEX03010959
RefSeq:XP_532990.2 Ensembl:ENSCAFT00000013000 GeneID:475780
KEGG:cfa:475780 Uniprot:E2R077
Length = 292
Score = 113 (44.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 143 IPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLY 202
IP+ G ++ + + S + GI + R VEI F LY
Sbjct: 108 IPEFYVGSILRVTTADLYANGKASQFLGICIQRSGAGLGATFILRNTIEGQGVEICFELY 167
Query: 203 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
+P I+EI+V+ K L YLRD LP STF
Sbjct: 168 NPRIQEIQVIKLEKRLDDSLLYLRDALPEYSTF 200
>UNIPROTKB|F1NEW6 [details] [associations]
symbol:MRPL19 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR001857 Pfam:PF01245 PRINTS:PR00061 GO:GO:0005739
GO:GO:0006412 GO:GO:0031965 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680
GeneTree:ENSGT00390000009415 OMA:KRWERPN EMBL:AADN02018161
IPI:IPI00592787 Ensembl:ENSGALT00000026999 Uniprot:F1NEW6
Length = 253
Score = 109 (43.4 bits), Expect = 0.00017, P = 0.00017
Identities = 29/93 (31%), Positives = 40/93 (43%)
Query: 143 IPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLY 202
IP+ G ++ + P + + + GI + R VEI + LY
Sbjct: 71 IPEFYVGSILAVTTADPYADGKTNRFVGICIQRGGRGLGATFVLRNVIEDQGVEICYELY 130
Query: 203 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
SP I+EI V+ K L YLRD LP STF
Sbjct: 131 SPRIQEITVLKLEKRLDDNLTYLRDALPEYSTF 163
>FB|FBgn0037608 [details] [associations]
symbol:mRpL19 "mitochondrial ribosomal protein L19"
species:7227 "Drosophila melanogaster" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0005762 "mitochondrial large ribosomal subunit"
evidence=ISS] InterPro:IPR001857 Pfam:PF01245 PROSITE:PS01015
EMBL:AE014297 GO:GO:0006412 GO:GO:0005762 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR15680 CTD:9801
eggNOG:NOG247570 GeneTree:ENSGT00390000009415 OMA:DLYNPTI
EMBL:AY061413 RefSeq:NP_524284.1 UniGene:Dm.2462
ProteinModelPortal:Q9VHN6 SMR:Q9VHN6 DIP:DIP-23691N
MINT:MINT-996971 STRING:Q9VHN6 PaxDb:Q9VHN6 PRIDE:Q9VHN6
EnsemblMetazoa:FBtr0081901 GeneID:41028 KEGG:dme:Dmel_CG8039
FlyBase:FBgn0037608 InParanoid:Q9VHN6 OrthoDB:EOG4XKSQ1
PhylomeDB:Q9VHN6 GenomeRNAi:41028 NextBio:821796 Bgee:Q9VHN6
GermOnline:CG8039 Uniprot:Q9VHN6
Length = 306
Score = 110 (43.8 bits), Expect = 0.00018, P = 0.00018
Identities = 27/93 (29%), Positives = 42/93 (45%)
Query: 143 IPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLY 202
+P+ G V+ + P + S + GI ++R +E+V+ LY
Sbjct: 99 LPEFYVGSVLAVTSSDPHAAGKTSRFVGICINRDRCGLRARFILRNVIDHQGMEVVYELY 158
Query: 203 SPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
P I +I+V+ K L+YLRD LP STF
Sbjct: 159 DPTILKIEVLRLEKRLDDSLFYLRDALPEYSTF 191
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 236 174 0.00075 109 3 11 22 0.38 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 578 (61 KB)
Total size of DFA: 133 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.13u 0.13s 12.26t Elapsed: 00:00:01
Total cpu time: 12.13u 0.13s 12.26t Elapsed: 00:00:01
Start: Fri May 10 20:17:07 2013 End: Fri May 10 20:17:08 2013