BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026573
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W463|RK191_ARATH 50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana
GN=At4g17560 PE=2 SV=1
Length = 225
Score = 266 bits (680), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 154/241 (63%), Positives = 179/241 (74%), Gaps = 23/241 (9%)
Query: 1 MGSQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPI---GWNLGFFV 57
M LPQALH IPR+ TQ SK LGFS+ LS P + +SVS + G GF +
Sbjct: 3 MSFHRLPQALHMIPRNPTQS--SKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSL 60
Query: 58 NAQVKDSFVVRAE-ANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEE-EVKAP 115
+ +V++ F+VRAE N EAE+ E VA A++E VEE E K
Sbjct: 61 DTRVRNEFIVRAEEGNTEAESEE----------------FVAEIADTEGNVEEVVEAKPT 104
Query: 116 RKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSR 175
RKPR+KLGD+MGILN++A+E +E RP+P+IRTGD+VEIKLEVPEN+RRLSIYKGIVMSR
Sbjct: 105 RKPRIKLGDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSR 164
Query: 176 QNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 235
QNAGIHTTIRIRRIIAGIGVEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF
Sbjct: 165 QNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTF 224
Query: 236 K 236
K
Sbjct: 225 K 225
>sp|Q8RXX5|RK192_ARATH 50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana
GN=At5g47190 PE=2 SV=1
Length = 229
Score = 252 bits (643), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/237 (61%), Positives = 171/237 (72%), Gaps = 15/237 (6%)
Query: 3 SQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPIGW---NLGFFVNA 59
S +LPQALH IPR T SK LG S++L R V+ +SVS + N GF +++
Sbjct: 5 SHLLPQALHMIPR--TPSFSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAIDS 62
Query: 60 QVKDSFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEEVKAPRKPR 119
+ + F+ +AE + E E +E V E E E V EE K P K R
Sbjct: 63 KKRKEFIAKAEESTEGETEAVVENA----------VETEAEGEGEATVAAEEAKPPWKTR 112
Query: 120 VKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNAG 179
VKLGDIMG+LNK+A+E +E+ RP+P +RTGD+VEIKLEVPEN+RRLSIYKGIVMSRQNAG
Sbjct: 113 VKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAG 172
Query: 180 IHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
IHTTIRIRRIIAGIGVEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 173 IHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229
>sp|P82413|RK19_SPIOL 50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea
GN=RPL19 PE=1 SV=2
Length = 233
Score = 246 bits (627), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 143/245 (58%), Positives = 176/245 (71%), Gaps = 21/245 (8%)
Query: 1 MGSQVLPQALHWIPRS-STQCIP-SKRLGFSTVLSRGPFVSHGVS-------VSAKPIGW 51
M S+VLPQAL IP + S QC P K+LGF +R +S S+
Sbjct: 1 MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60
Query: 52 NLGFFVNAQVKDSFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEE 111
N + ++SFVVR+EA + ++A ++ AV A+ ++ V EAE+E++
Sbjct: 61 NFSSIFSFPARNSFVVRSEAEDSSDA-----PAESVAVVAEEELPVESEAEAEER----- 110
Query: 112 VKAPRKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGI 171
PR+ RVKLGDIMGILNK+AV A+E RP+P IRTGD+V+I+LEVPEN+RRLS+YKGI
Sbjct: 111 --PPRQQRVKLGDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGI 168
Query: 172 VMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPR 231
V+SRQNAGIHTTIRIRRIIAG+GVEIVFPLYSPNIKEIKVVSHRKVR+ARLYYLRDKLPR
Sbjct: 169 VISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKLPR 228
Query: 232 LSTFK 236
LSTFK
Sbjct: 229 LSTFK 233
>sp|Q4JV09|RL19_CORJK 50S ribosomal protein L19 OS=Corynebacterium jeikeium (strain K411)
GN=rplS PE=3 SV=1
Length = 113
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 75/104 (72%), Gaps = 3/104 (2%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL+K V+A++ IP+ R GD +++ ++V E ++ RL +++G+V+ RQN+GI T
Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTLDVHVKVIEGSKSRLQVFRGVVIRRQNSGIRETF 58
Query: 185 RIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 228
IR++ GIGVE FP++SPNI I V+S KVRRA+LYYLR++
Sbjct: 59 TIRKVSFGIGVERTFPVHSPNIDRIDVLSRGKVRRAKLYYLRER 102
>sp|A6TRS5|RL19_ALKMQ 50S ribosomal protein L19 OS=Alkaliphilus metalliredigens (strain
QYMF) GN=rplS PE=3 SV=1
Length = 117
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+ ++A++ ++ I D TGD +++ + + E R R+ +++GIV+ RQ GI T +RRI
Sbjct: 5 KGIDAAQLKKDIIDFNTGDTIKVHVRIKEGTRERIQVFEGIVIKRQGGGIAETFTVRRIS 64
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE FP++SP I++I++V H KVRRAR++YLRD++ + + FK
Sbjct: 65 YGVGVERTFPVHSPKIEKIEIVKHGKVRRARIFYLRDRIGK-AAFK 109
>sp|B1VG80|RL19_CORU7 50S ribosomal protein L19 OS=Corynebacterium urealyticum (strain
ATCC 43042 / DSM 7109) GN=rplS PE=3 SV=1
Length = 113
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 78/112 (69%), Gaps = 3/112 (2%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL+K V+A++ IP+ R GD V++ L+V E ++ R+ +++G+V+ RQ +GI T
Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTVDVHLKVIEGSKSRVQVFRGVVIKRQGSGIRETF 58
Query: 185 RIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
+R++ GIGVE P++SPNI +++V+S KVRRA+LYYLRD+ + + K
Sbjct: 59 TVRKVSFGIGVERTIPVHSPNIDKLEVLSRGKVRRAKLYYLRDRHGKAAKIK 110
>sp|B8HT34|RL19_CYAP4 50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rplS PE=3 SV=1
Length = 120
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P+I GD V++ + + E N+ R Y+GIV++++N+GI+ TI +RRI
Sbjct: 8 RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VF L+SP ++ IK++ KVRRA+LYYLRD++ + + K
Sbjct: 68 QGVGVERVFLLHSPRVESIKIIKRGKVRRAKLYYLRDRVGKATRVK 113
>sp|B2JA71|RL19_NOSP7 50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133
/ PCC 73102) GN=rplS PE=3 SV=1
Length = 120
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +PDI GD V++ +++ E + R+ Y+G+V++++N GI+ TI +R++
Sbjct: 8 RSIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVF 67
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VF L+SP I IKV+ KVRRA+LYYLRD++ + + K
Sbjct: 68 QGVGVERVFLLHSPRIDSIKVLRRGKVRRAKLYYLRDRVGKATRIK 113
>sp|Q2VZV5|RL19_MAGSA 50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rplS PE=3 SV=1
Length = 148
Score = 91.3 bits (225), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 124 DIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHT 182
+I+ L K +E ++R +P GD +++ ++V E NR R+ Y+G+ ++R+N G+++
Sbjct: 3 NIIEQLEKEQIEKLTADRGVPSFAPGDTLKVNVKVIEGNRERVQAYEGVCIARKNDGLNS 62
Query: 183 TIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 228
+ +R+I G GVE +FPLYSPNI I+VV VRRA+LYYLRD+
Sbjct: 63 SFVVRKISYGEGVERIFPLYSPNIASIEVVRRGDVRRAKLYYLRDR 108
>sp|Q2RJV3|RL19_MOOTA 50S ribosomal protein L19 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplS PE=3 SV=1
Length = 113
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 71/105 (67%), Gaps = 1/105 (0%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
+E + IPD R GD V + ++V E NR R+ I++G+V+ R+ GI+ T +RR+
Sbjct: 6 TLEKEQLRTDIPDFRPGDTVRVHVKVVEGNRERIQIFEGVVIGRRGRGINETFTVRRVSY 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+ VE +FPL+SP ++ I+VV H KVRRA+LYYLR+++ + + K
Sbjct: 66 GVAVERIFPLHSPRLERIEVVRHGKVRRAKLYYLRERVGKAARIK 110
>sp|Q7V668|RL19_PROMM 50S ribosomal protein L19 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplS PE=3 SV=1
Length = 158
Score = 90.9 bits (224), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 135 EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 193
EAS+ + + DI GD V + + + E N+ R+ Y+G+V+++++ GIH TI +RRI GI
Sbjct: 51 EASQQKSDLNDIYVGDTVRVGVRISEGNKERIQPYEGVVIAKRHGGIHETITVRRIFQGI 110
Query: 194 GVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GVE VF L+SP + IKV KVRRA+L+YLR+++ + + K
Sbjct: 111 GVERVFMLHSPQVASIKVERRGKVRRAKLFYLRERVGKATRVK 153
>sp|Q02ZX9|RL19_LACLS 50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=rplS PE=3 SV=1
Length = 114
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
++ A++ IPD R GD V + +V E R R+ I++G+V++R+N+GI+ T +R+I
Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISN 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
G+GVE +FP+++P +++I+V+ H KVRRA+LYYLR
Sbjct: 66 GVGVERIFPVHTPRVEKIEVIRHGKVRRAKLYYLR 100
>sp|A2RLS5|RL19_LACLM 50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=rplS PE=3 SV=1
Length = 114
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
++ A++ IPD R GD V + +V E R R+ I++G+V++R+N+GI+ T +R+I
Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISN 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
G+GVE +FP+++P +++I+V+ H KVRRA+LYYLR
Sbjct: 66 GVGVERIFPVHTPRVEKIEVIRHGKVRRAKLYYLR 100
>sp|Q6NGI8|RL19_CORDI 50S ribosomal protein L19 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=rplS PE=3
SV=1
Length = 113
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 71/103 (68%), Gaps = 3/103 (2%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M +L+K V+A+ IP R GD + + ++V E ++ R+ ++KG+V+ RQ AG+ T
Sbjct: 1 MNLLDK--VDAASLRDDIPAFRPGDTLNVHVKVIEGSKSRIQVFKGVVIRRQGAGVRETF 58
Query: 185 RIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 227
IR++ GIGVE FP+++PNI +I+VV+ VRRA+LYYLRD
Sbjct: 59 TIRKVSFGIGVERTFPVHTPNIDKIEVVTRGDVRRAKLYYLRD 101
>sp|Q3MA22|RL19_ANAVT 50S ribosomal protein L19 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplS PE=3 SV=2
Length = 120
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P+I GD V + +++ E ++ R+ Y+G+V++R+N GI+ TI +RR+
Sbjct: 8 RSIEAEQLKSNLPEIYIGDTVRVGVKIKEGDKYRVQPYEGVVIARRNGGINETITVRRVF 67
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VF L+SP I IKV+ KVRRA+LYYLR ++ + + K
Sbjct: 68 QGVGVERVFLLHSPRIDNIKVLRRGKVRRAKLYYLRGRVGKATRIK 113
>sp|B2GFY5|RL19_KOCRD 50S ribosomal protein L19 OS=Kocuria rhizophila (strain ATCC 9341 /
DSM 348 / NBRC 103217 / DC2201) GN=rplS PE=3 SV=1
Length = 120
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL++ ++A +PD R GD + + + + E NR R+ ++KG VM RQ +G+ T
Sbjct: 1 MNILDQ--LDAKSLRDDVPDFRPGDTLNVHVNIVEGNRSRVQVFKGFVMGRQGSGVRETF 58
Query: 185 RIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 228
+R++ G+GVE FP++SP I +I++VS VRRA+LYY+RD+
Sbjct: 59 TVRKVSFGVGVERTFPVHSPIIDKIELVSRGDVRRAKLYYMRDR 102
>sp|Q9CH65|RL19_LACLA 50S ribosomal protein L19 OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=rplS PE=3 SV=1
Length = 114
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 70/95 (73%), Gaps = 1/95 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
++ A++ IPD R GD V + +V E R R+ +++G+V++R+N+GI+ T +R+I
Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQMFEGVVIARKNSGINETYTVRKISN 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
G+GVE +FP+++P +++I+V+ H KVRRA+LYYLR
Sbjct: 66 GVGVERIFPVHTPRVEQIEVIRHGKVRRAKLYYLR 100
>sp|B2IFY8|RL19_BEII9 50S ribosomal protein L19 OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplS PE=3
SV=1
Length = 148
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 139 SERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEI 197
++RPIP + GD V + ++V E R R+ Y+G+ ++R G++ + +R+I G GVE
Sbjct: 17 AKRPIPAFQPGDTVIVNVKVKEGERTRVQAYEGVCIARNGGGLNESFTVRKISYGEGVER 76
Query: 198 VFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 228
VFP+YSPNI IKVV KVRRA+LYYLRD+
Sbjct: 77 VFPIYSPNIDSIKVVRRGKVRRAKLYYLRDR 107
>sp|Q8YLK1|RL19_NOSS1 50S ribosomal protein L19 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplS PE=3 SV=2
Length = 120
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P+I GD V + +++ E + R+ Y+G+V++R+N GI+ TI +RR+
Sbjct: 8 RSIEAEQLKSNLPEIYIGDTVRVGVKIKEGEKYRVQPYEGVVIARRNGGINETITVRRVF 67
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VF L+SP I IKV+ KVRRA+LYYLR ++ + + K
Sbjct: 68 QGVGVERVFLLHSPRIDNIKVLRRGKVRRAKLYYLRGRVGKATRIK 113
>sp|Q7V2K1|RL19_PROMP 50S ribosomal protein L19 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rplS PE=3 SV=1
Length = 160
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 72/103 (69%), Gaps = 1/103 (0%)
Query: 135 EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 193
E + ++ +P+I GD V++ +++ E N+ R+ Y+G+V+++++ G+H TI +RRI GI
Sbjct: 53 EREQLKKQLPEIYVGDTVKVGVKITEGNKERVQPYEGVVIAKRHGGLHQTITVRRIFQGI 112
Query: 194 GVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GVE VF L+SP + +KV KVRRA+L+YLRD++ + + K
Sbjct: 113 GVERVFMLHSPQVASLKVERRGKVRRAKLFYLRDRVGKATRVK 155
>sp|C4LJB9|RL19_CORK4 50S ribosomal protein L19 OS=Corynebacterium kroppenstedtii (strain
DSM 44385 / CCUG 35717) GN=rplS PE=3 SV=1
Length = 113
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTI 184
M IL+K V+A+ IP+ R+GD V++ ++V E ++ R+ +++G+V+ RQ +G+ T
Sbjct: 1 MNILDK--VDAASLRDDIPEFRSGDTVDVHVKVIEGQKSRIQVFRGVVIRRQGSGVRETF 58
Query: 185 RIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 227
+R++ GIGVE FP+++PNI I+V++ VRRA+LYYLR+
Sbjct: 59 TVRKVSFGIGVERTFPVHTPNIDHIEVLTRGDVRRAKLYYLRN 101
>sp|B0CAC6|RL19_ACAM1 50S ribosomal protein L19 OS=Acaryochloris marina (strain MBIC
11017) GN=rplS PE=3 SV=1
Length = 120
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + +P I GD V + +++ E N+ R Y+G V+++++ GI+ TI +RRI
Sbjct: 8 RSIEAEHFKETLPTIYVGDTVRVGVQIREGNKERTQPYEGTVIAKRHGGINETITVRRIF 67
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VF ++SP I IKVV KVRRA+LYYLRD++ + + K
Sbjct: 68 QGVGVERVFLIHSPRITNIKVVRRGKVRRAKLYYLRDRVGKATRVK 113
>sp|O78409|RK19_GUITH 50S ribosomal protein L19, chloroplastic OS=Guillardia theta
GN=rpl19 PE=3 SV=2
Length = 118
Score = 89.4 bits (220), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
VE++ S + +P ++ GD V + + + E N+ R+ +G+++S+ N GI+ TI IRR++ G
Sbjct: 11 VESNHSNKTLPQLQVGDTVRLGVSITEGNKERIQATEGVIISKSNCGINLTITIRRVLQG 70
Query: 193 IGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 228
IG+E V+ L+SP +K I+++ K+RRA+LYYLR +
Sbjct: 71 IGIERVYLLHSPKLKSIEILRKSKIRRAKLYYLRTR 106
>sp|Q31C59|RL19_PROM9 50S ribosomal protein L19 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplS PE=3 SV=2
Length = 126
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Query: 135 EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 193
E + ++ +P+I GD V++ + + E N+ R+ Y+G+V+++++ GIH TI +RRI GI
Sbjct: 19 ENEQLKKELPEIYVGDTVKVGVRITEGNKERVQPYEGVVIAKRHGGIHQTITVRRIFQGI 78
Query: 194 GVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GVE VF L+SP + +KV KVRRA+L+YLRD++ + + K
Sbjct: 79 GVERVFMLHSPQVASLKVERRGKVRRAKLFYLRDRVGKATRVK 121
>sp|A5N817|RL19_CLOK5 50S ribosomal protein L19 OS=Clostridium kluyveri (strain ATCC 8527
/ DSM 555 / NCIMB 10680) GN=rplS PE=3 SV=1
Length = 115
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+ +E+ +P+ GD V++ + + E NR+R+ +++GIV+ RQN G+ T +RR+
Sbjct: 6 KQIESQYIRTDLPNFNIGDTVKVHVRIKEGNRQRVQVFEGIVLKRQNGGVRETFTVRRVA 65
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE FP+ +P I++I+VV KVRRA+LYYLRD++ + + K
Sbjct: 66 YGVGVERTFPVNAPIIEKIQVVRRGKVRRAKLYYLRDRVGKAAKVK 111
>sp|Q46GU7|RL19_PROMT 50S ribosomal protein L19 OS=Prochlorococcus marinus (strain
NATL2A) GN=rplS PE=3 SV=1
Length = 162
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 97 VAVEAESEDKVEEEEVKAPRKPRVKLGDIMGILNK------RAVEASESERPIPDIRTGD 150
V +E ES + E+ EVK + + K G + I N + E ++ + +PD+ GD
Sbjct: 13 VKIEDES-NASEDSEVKTASETKSK-GKKISIQNLSPAEIIKTFEDAQLGKDLPDVYVGD 70
Query: 151 VVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEI 209
V + + + E N+ R+ Y+G+V+++++ GIH TI +RRI GIGVE +F ++SP + I
Sbjct: 71 TVRVGVRISEGNKERVQPYEGVVIAKRHGGIHQTITVRRIFQGIGVERIFLVHSPQVASI 130
Query: 210 KVVSHRKVRRARLYYLRDKLPRLSTFK 236
KV KVRRA+L+YLR+++ + + K
Sbjct: 131 KVERRGKVRRAKLFYLRERVGKATRVK 157
>sp|B2TJ32|RL19_CLOBB 50S ribosomal protein L19 OS=Clostridium botulinum (strain Eklund
17B / Type B) GN=rplS PE=3 SV=1
Length = 116
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
RA+EA + +PD + GD V++ ++V E R R+ +++G V+ +QN G+ T +RR+
Sbjct: 6 RAIEAEQLRTDLPDFKIGDNVKVYVKVTEGTRERVQMFEGTVIKKQNGGLRETFTVRRVA 65
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G GVE FP+++P I++I++ KVRRA+LYYLRD++ + + K
Sbjct: 66 YGCGVERTFPMHAPIIEKIEISRRGKVRRAKLYYLRDRVGKAAKVK 111
>sp|A0LV69|RL19_ACIC1 50S ribosomal protein L19 OS=Acidothermus cellulolyticus (strain
ATCC 43068 / 11B) GN=rplS PE=3 SV=1
Length = 121
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
V+AS IPD R GD +++ + V E NR R+ +++G+V+ RQ +G+ T +R++
Sbjct: 6 TVDASSLRTDIPDFRPGDTLKVHVRVVEGNRSRVQVFQGVVIRRQGSGVRETFTVRKVSF 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 227
G+GVE FP+++P I++I+VV+ VRRA+LYYLRD
Sbjct: 66 GVGVERTFPVHTPVIEKIEVVTRGHVRRAKLYYLRD 101
>sp|Q3ALW5|RL19_SYNSC 50S ribosomal protein L19 OS=Synechococcus sp. (strain CC9605)
GN=rplS PE=3 SV=2
Length = 132
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 73/106 (68%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R+ E+S+ + +P+I GD V + + + E N+ R+ Y+G+V+S+++ G++ TI +RRI
Sbjct: 22 RSFESSQQKDDLPEIYVGDTVRVGVRISEGNKERVQPYEGVVISKRHGGLNQTITVRRIF 81
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GIGVE VF L+SP + IKV KVRRA+L+YLR+++ + + K
Sbjct: 82 QGIGVERVFMLHSPQVASIKVERRGKVRRAKLFYLRERVGKATRVK 127
>sp|A4XLF0|RL19_CALS8 50S ribosomal protein L19 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rplS PE=3 SV=1
Length = 128
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R +E+ + IPD + GD V + +V E R R+ ++G+V+ R+ G+ T +RRI
Sbjct: 5 REIESEMLRKDIPDFKPGDTVRVHFKVIEGGRERIQAFEGLVIKRRGKGLSETFTVRRIS 64
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VFPL+SP I++I+V+ KVRRA+LYY+R+K+ + + K
Sbjct: 65 YGVGVERVFPLHSPRIEKIEVIRRGKVRRAKLYYIREKIGKAAKIK 110
>sp|A8MHC5|RL19_ALKOO 50S ribosomal protein L19 OS=Alkaliphilus oremlandii (strain
OhILAs) GN=rplS PE=3 SV=1
Length = 115
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL R + + + ++ +P+ GD V++ +++ E +R R+ I++GIV+ RQ GI T
Sbjct: 1 MDIL--RTLASEQLKKDVPEFSNGDTVKVHVKIKEGSRERIQIFEGIVIKRQGGGIAETF 58
Query: 185 RIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
+RRI +G+GVE FP++SP +++++V +VRRA+LYYLRD++ + + FK
Sbjct: 59 TVRRIASGVGVERTFPVHSPRVEKVEVTRRGQVRRAKLYYLRDRVGK-AAFK 109
>sp|Q9MUN9|RK19_MESVI 50S ribosomal protein L19, chloroplastic OS=Mesostigma viride
GN=rpl19 PE=3 SV=1
Length = 119
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
+EA++ + +P+I GD V++ L + E N+ R+ Y+G+V+++ N+ ++TI +R++ G
Sbjct: 10 IEANQIKANLPNIYVGDYVKVGLLIQEGNKERVQPYEGVVIAKHNSASNSTITVRKMFQG 69
Query: 193 IGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
IGVE +F ++SP I I+V+S+ KVRRA+LYYLR+++ + + K
Sbjct: 70 IGVERIFLIHSPRITSIEVISNSKVRRAKLYYLRERIGKATRLK 113
>sp|Q8DJC4|RL19_THEEB 50S ribosomal protein L19 OS=Thermosynechococcus elongatus (strain
BP-1) GN=rplS PE=3 SV=1
Length = 120
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P I GD V + +++ E ++ R+ Y+G V++ +N GI+ TI +RR+
Sbjct: 8 RSIEAEQMKTDLPVIYVGDRVRVGVKIKEGDKERVQPYEGDVIAMRNTGINRTITVRRVF 67
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VF L+SP I IKV+ KVRRA+LYYLRD++ + S K
Sbjct: 68 QGVGVERVFLLHSPRIDSIKVIQRGKVRRAKLYYLRDRMGKASRIK 113
>sp|Q7U583|RL19_SYNPX 50S ribosomal protein L19 OS=Synechococcus sp. (strain WH8102)
GN=rplS PE=3 SV=1
Length = 154
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 77/124 (62%), Gaps = 4/124 (3%)
Query: 114 APRKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIV 172
AP P KL I +A E + + +P+I GD V + + + E N+ R+ Y+G+V
Sbjct: 29 APTSPAQKLSAEALI---KAFETEQMKSDLPEIYVGDTVRVGVRISEGNKERVQPYEGVV 85
Query: 173 MSRQNAGIHTTIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRL 232
+S+++ G++ TI +RRI GIGVE VF L+SP + IKV KVRRA+L+YLR+++ +
Sbjct: 86 ISKRHGGMNQTITVRRIFQGIGVERVFMLHSPQVANIKVERRGKVRRAKLFYLRERVGKA 145
Query: 233 STFK 236
+ K
Sbjct: 146 TRVK 149
>sp|B1XJH5|RL19_SYNP2 50S ribosomal protein L19 OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=rplS PE=3 SV=1
Length = 120
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P I GD V + +++ E + R+ Y+G V++ +N GI+ TI +R+I
Sbjct: 8 RSIEAEQLKDDLPTIHVGDTVRVGVKIKEGTKERVQPYEGTVIAMRNGGINETITVRKIF 67
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GIGVE VF L+SP + IKV+ KVRRA+LYYLRD++ + + K
Sbjct: 68 QGIGVERVFLLHSPLVDNIKVIRRGKVRRAKLYYLRDRVGKATRIK 113
>sp|P56356|RK19_CHLVU 50S ribosomal protein L19, chloroplastic OS=Chlorella vulgaris
GN=rpl19 PE=3 SV=1
Length = 130
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+++ + +PD+R GD+V I + + E N++R+ ++G V+S+ AG ++T+ +R+ +
Sbjct: 9 QAIQSGTIKTELPDVRVGDLVRIGVSIQEGNKQRIQPFEGTVISKHQAGANSTVTVRKSL 68
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GIGVE VFPLY+P + ++V+ +V RA+LYYLR + + + K
Sbjct: 69 QGIGVERVFPLYAPCVANLQVLRRAQVSRAKLYYLRSRTGKATRLK 114
>sp|B9MQX0|RL19_CALBD 50S ribosomal protein L19 OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=rplS PE=3 SV=1
Length = 128
Score = 87.4 bits (215), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R +E+ + IPD + GD V + +V E R R+ ++G+V+ R+ G+ T +RRI
Sbjct: 5 REIESEMLRKDIPDFKPGDTVRVYFKVIEGGRERVQAFEGLVIKRRGKGLSETFTVRRIS 64
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GIGVE VFPL+SP +++I+V+ KVRRA+LYY+R+K+ + + K
Sbjct: 65 YGIGVERVFPLHSPRLEKIEVIRRGKVRRAKLYYIREKIGKAAKIK 110
>sp|B9M596|RL19_GEOSF 50S ribosomal protein L19 OS=Geobacter sp. (strain FRC-32) GN=rplS
PE=3 SV=1
Length = 118
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 68/95 (71%), Gaps = 1/95 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
A+E + ++ IP R GD V++++++ E ++ R+ ++G+V+ RQN GI + +R+I
Sbjct: 6 AIEMEQMKKNIPGFRPGDTVKVQVKIVEGDKSRIQAFQGVVIGRQNGGIRESFTVRKISN 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 226
G+GVE FPL+SP+I I+V++ +VRRA+LYYLR
Sbjct: 66 GVGVERSFPLHSPSIDAIEVITRGQVRRAKLYYLR 100
>sp|A0Q0X9|RL19_CLONN 50S ribosomal protein L19 OS=Clostridium novyi (strain NT) GN=rplS
PE=3 SV=1
Length = 116
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+EA + + I + GD V + + + E N+ RL ++G V+ RQN GI T +RR+
Sbjct: 6 KAIEAEQVKTDITEFNVGDTVRVNVRIKEGNKERLQAFEGTVIKRQNGGIRETFTVRRVA 65
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G GVE FP+ SP ++ IKVV KVRR++LYYLR+++ + + K
Sbjct: 66 YGTGVERTFPVNSPMLESIKVVRRGKVRRSKLYYLRNRVGKAAKVK 111
>sp|Q5YS45|RL19_NOCFA 50S ribosomal protein L19 OS=Nocardia farcinica (strain IFM 10152)
GN=rplS PE=3 SV=1
Length = 113
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 143 IPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPL 201
+PD R GD + + ++V E ++ R+ ++KG+V+ RQ GI T +R++ G+GVE FP+
Sbjct: 16 VPDFRPGDTLNVHVKVIEGSKERIQVFKGVVIRRQGGGIRETFTVRKVSFGVGVERTFPV 75
Query: 202 YSPNIKEIKVVSHRKVRRARLYYLRD 227
+SPNI I VV+ VRRA+LYYLRD
Sbjct: 76 HSPNIDHIDVVTRGDVRRAKLYYLRD 101
>sp|Q2RV56|RL19_RHORT 50S ribosomal protein L19 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rplS PE=3 SV=1
Length = 163
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 71/109 (65%), Gaps = 1/109 (0%)
Query: 124 DIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHT 182
+I+ K +E +R +P GD + + ++V E NR+R+ +Y+G+ ++R+NA +++
Sbjct: 2 NIIEQFEKEQIEKLLEQRGVPQFSPGDTLRVHVKVIEGNRQRVQVYEGVCIARRNAALNS 61
Query: 183 TIRIRRIIAGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPR 231
+ +R+I G GVE +FPLY+P I I+VV KVRRA+LYYLR + R
Sbjct: 62 SFTVRKISFGEGVERIFPLYAPTIDRIEVVRRGKVRRAKLYYLRGRQGR 110
>sp|A1BGL6|RL19_CHLPD 50S ribosomal protein L19 OS=Chlorobium phaeobacteroides (strain
DSM 266) GN=rplS PE=3 SV=1
Length = 120
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
VEASE+ P I GD V+I+L+V E + RL ++G+V+S + AG TI +R+I G
Sbjct: 8 VEASEARNDFPAINPGDTVKIQLKVIEGEKERLQAFEGVVISDRGAGGSKTITVRKISHG 67
Query: 193 IGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 228
+GVE + P+ SPNI+ I V+ H K RRA+L+YLR +
Sbjct: 68 VGVERIIPVNSPNIESITVLKHGKARRAKLFYLRKR 103
>sp|Q895M1|RL19_CLOTE 50S ribosomal protein L19 OS=Clostridium tetani (strain
Massachusetts / E88) GN=rplS PE=3 SV=2
Length = 115
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 70/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+EA + +P + GD V++ +++ E R R+ +++G V+ RQN G+ T +RR+
Sbjct: 6 KAIEAEQIRTDLPAFKVGDTVKVHVKIKEGTRERIQVFEGTVIKRQNGGLRETFTVRRLA 65
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE FP+ +P + +I++V KVRRA+L+YLRD++ + + K
Sbjct: 66 YGVGVERTFPVNAPTVSKIEIVRKGKVRRAKLFYLRDRVGKAAKVK 111
>sp|B2V4E6|RL19_CLOBA 50S ribosomal protein L19 OS=Clostridium botulinum (strain Alaska
E43 / Type E3) GN=rplS PE=3 SV=1
Length = 116
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
RA+EA + +P+ + GD V++ ++V E R R+ +++G V+ +QN G+ T +RR+
Sbjct: 6 RAIEAEQLRTDLPNFKIGDNVKVYVKVTEGTRERVQMFEGTVIKKQNGGLRETFTVRRVA 65
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G GVE FP+++P I++I++ KVRRA+LYYLRD++ + + K
Sbjct: 66 YGCGVERTFPMHAPIIEKIEISRRGKVRRAKLYYLRDRVGKAAKVK 111
>sp|Q3AWM9|RL19_SYNS9 50S ribosomal protein L19 OS=Synechococcus sp. (strain CC9902)
GN=rplS PE=3 SV=2
Length = 131
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R E+++ + +P+I GD V + + + E NR R+ Y+G+V+S+++ G++ TI +RRI
Sbjct: 21 REFESAQQKTDLPEIYVGDTVRVGVRISEGNRERVQPYEGVVISKRHGGMNQTITVRRIF 80
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
GIGVE VF ++SP + IKV KVRRA+L+YLR+++ + + K
Sbjct: 81 QGIGVERVFMVHSPQVANIKVERRGKVRRAKLFYLRERVGKATRVK 126
>sp|C6E5I6|RL19_GEOSM 50S ribosomal protein L19 OS=Geobacter sp. (strain M21) GN=rplS
PE=3 SV=1
Length = 118
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
A+E ++ ++ IP GD +++++++ E ++ R+ ++G+ + RQN GI + +R+I
Sbjct: 6 AIEMAQMKKNIPKFIPGDTIKVQVKIVEGDKSRIQAFQGVCLGRQNGGIRESFTVRKISN 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VFPL+SP+I+ I+VV+ +VRRA+LYYLR + S K
Sbjct: 66 GVGVERVFPLHSPSIEAIEVVTRGQVRRAKLYYLRKLRGKASRIK 110
>sp|B5EBC7|RL19_GEOBB 50S ribosomal protein L19 OS=Geobacter bemidjiensis (strain Bem /
ATCC BAA-1014 / DSM 16622) GN=rplS PE=3 SV=1
Length = 118
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 72/105 (68%), Gaps = 1/105 (0%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
A+E ++ ++ IP GD +++++++ E ++ R+ ++G+ + RQN GI + +R+I
Sbjct: 6 AIEMAQMKKNIPKFIPGDTIKVQVKIVEGDKSRIQAFQGVCLGRQNGGIRESFTVRKISN 65
Query: 192 GIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE VFPL+SP+I+ I+VV+ +VRRA+LYYLR + S K
Sbjct: 66 GVGVERVFPLHSPSIEAIEVVTRGQVRRAKLYYLRKLRGKASRIK 110
>sp|Q47S63|RL19_THEFY 50S ribosomal protein L19 OS=Thermobifida fusca (strain YX) GN=rplS
PE=3 SV=1
Length = 114
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
+E ++ +PD R GD + + + V E NR R+ ++KG+V+ RQ +GI T +R+I
Sbjct: 8 LEKAQLRSDVPDFRPGDTLNVHVRVTEGNRTRIQVFKGVVIRRQGSGIRETFTVRKISYA 67
Query: 193 IGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRD 227
+GVE FP++SP I++I+VVS +VRRA+LYYLR+
Sbjct: 68 VGVERTFPVHSPVIEKIEVVSRGRVRRAKLYYLRN 102
>sp|A3DDH1|RL19_CLOTH 50S ribosomal protein L19 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=rplS PE=3 SV=1
Length = 114
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+E + ++ +PD GD V + ++V E NR R+ ++G V++++ +GI T +R+I
Sbjct: 5 KAIEQEQLKKDVPDFSIGDYVRVNVKVKEGNRERIQAFEGTVIAKKGSGISETFTVRKIS 64
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE +FP++SP + I+V+ KVRRA+LYYLR+++ + + K
Sbjct: 65 YGVGVERIFPVHSPRVAGIEVIRKGKVRRAKLYYLRERVGKSAKVK 110
>sp|C0ZFN0|RL19_BREBN 50S ribosomal protein L19 OS=Brevibacillus brevis (strain 47 / JCM
6285 / NBRC 100599) GN=rplS PE=3 SV=1
Length = 115
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTIRIRRII 190
R +E ++ ++ IP R GD V + ++V E +R R+ +++G+ + R+ GI T R+I
Sbjct: 6 RELEKAQLKQDIPAFRPGDTVRVHVKVIEGQRERIQLFEGVCIRRRGTGISETFTARKIS 65
Query: 191 AGIGVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 236
G+GVE FP+++P I +I++V H KVRRA+LYYLRD++ + + K
Sbjct: 66 YGVGVERTFPVHTPKIDKIEIVRHGKVRRAKLYYLRDRVGKAARIK 111
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,833,473
Number of Sequences: 539616
Number of extensions: 3096254
Number of successful extensions: 19811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 17443
Number of HSP's gapped (non-prelim): 1710
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)