BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026577
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VYR2|NUDT9_ARATH Nudix hydrolase 9 OS=Arabidopsis thaliana GN=NUDT9 PE=2 SV=1
Length = 311
Score = 280 bits (716), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 137/209 (65%), Positives = 165/209 (78%), Gaps = 3/209 (1%)
Query: 7 SAYKLLLSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQKF 66
S Y+LLLSCP G SPS+VSV F +S+DR+P D LE+SIS++W+ R Q N SLFNGQKF
Sbjct: 13 SRYQLLLSCPSGLSPSQVSVDFSKSHDRIPRQDPGLEDSISQVWEQRSQGNSSLFNGQKF 72
Query: 67 RYGGHIMRGEGGSSVE-SHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQHTAS 125
RYGG+ + + GS+ E HVCL LGLTDYRTFVGTNL+ LWEKFLV SEDD ++C+HT+S
Sbjct: 73 RYGGYCLDDDDGSTNEVPHVCLRLGLTDYRTFVGTNLSSLWEKFLVTSEDDSVRCRHTSS 132
Query: 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGST--DSEFI 183
PLGNGAV+ETSDKKI++L+RSNNVGEFPGH+VFPGGHPEP GI H + E +
Sbjct: 133 PLGNGAVIETSDKKIIVLRRSNNVGEFPGHYVFPGGHPEPTAVGIDYHQLENNVQTGEVL 192
Query: 184 NHKVSQEMFDSITREVVEEIGVPSESLVS 212
N KV+QEMFDSI EVVEE G+P+ SL S
Sbjct: 193 NKKVTQEMFDSIICEVVEETGIPASSLSS 221
>sp|Q6P9U1|NUD22_RAT Nucleoside diphosphate-linked moiety X motif 22 OS=Rattus
norvegicus GN=Nudt22 PE=2 SV=1
Length = 308
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 6 DSAYKLLLSCPHG-FSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQ 64
D L+L CP G S +VSV ++DR P P+ + +I+ IW++R+Q +F+
Sbjct: 2 DPEVSLMLLCPPGGLSQEQVSVELSPAHDRRPLPEGD--KTITAIWETRLQAQPWIFDAP 59
Query: 65 KFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HT 123
KFR + SS E + LHLGLT YR F+GTN + D Q +
Sbjct: 60 KFRLHSATL---ASSSPEPQLLLHLGLTSYRDFLGTNWSSSASWLRQQGATDWGDKQAYL 116
Query: 124 ASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFI 183
A PLG GA + T+D ++ L+RS V E PG PGGHPEPQ S P +
Sbjct: 117 ADPLGVGAALVTADDFLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGSIP---QHEDLP 173
Query: 184 NHKVSQEMFDSITREVVEEIGVPSESLVSYSLL 216
V +E+F S+ +EV +E+ +P +L LL
Sbjct: 174 GELVVRELFSSVLQEVCDEVNLPLHTLSQPLLL 206
>sp|Q2TBI8|NUD22_BOVIN Nucleoside diphosphate-linked moiety X motif 22 OS=Bos taurus
GN=NUDT22 PE=2 SV=1
Length = 290
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 102/214 (47%), Gaps = 11/214 (5%)
Query: 6 DSAYKLLLSCPHGFSP-SEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQ 64
D LLL CP G P +V +YDR P P + +I IW+SR+Q LFN
Sbjct: 2 DPEVSLLLQCPPGGLPEKQVRAELSPAYDRRPLPGGD--KAIIAIWESRLQAQPWLFNAP 59
Query: 65 KFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNL--NPLWEKFLVPSEDDVIQCQH 122
KFR + G + L LGLT Y+ F+GTN + W + ++ Q +
Sbjct: 60 KFRLHSATLAPTGLPG--PQLLLRLGLTSYQDFLGTNWASSAAWLRQQGATDWGDKQA-Y 116
Query: 123 TASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEF 182
A PLG GA + T+D ++ L+RS V E PG PGGHPEPQ P +
Sbjct: 117 LADPLGVGAALATADDFLVFLRRSGQVAEAPGLVDVPGGHPEPQALCPGDSPL---HKDL 173
Query: 183 INHKVSQEMFDSITREVVEEIGVPSESLVSYSLL 216
V E+F S+ +E+ +E+ VP +L LL
Sbjct: 174 PGELVVHELFSSVLQEICDEVNVPPLTLSQPLLL 207
>sp|Q9BRQ3|NUD22_HUMAN Nucleoside diphosphate-linked moiety X motif 22 OS=Homo sapiens
GN=NUDT22 PE=2 SV=3
Length = 303
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 6 DSAYKLLLSCPHGFSPSE-VSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQ 64
D LLL CP G P E + ++DR P P + +I+ IW++R++ LF+
Sbjct: 2 DPEVTLLLQCPGGGLPQEQIQAELSPAHDRRPLPGGD--EAITAIWETRLKAQPWLFDAP 59
Query: 65 KFRYGGHIMRGEGGSSVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HT 123
KFR + G S + L LGLT YR F+GTN + D Q +
Sbjct: 60 KFRLHSATLAPIG--SRGPQLLLRLGLTSYRDFLGTNWSSSAAWLRQQGATDWGDTQAYL 117
Query: 124 ASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTD-SEF 182
A PLG GA + T+D ++ L+RS V E PG PGGHPEPQ P GS +
Sbjct: 118 ADPLGVGAALATADDFLVFLRRSRQVAEAPGLVDVPGGHPEPQ----ALCPGGSPQHQDL 173
Query: 183 INHKVSQEMFDSITREVVEEI 203
V E+F S+ +E+ +E+
Sbjct: 174 AGQLVVHELFSSVLQEICDEV 194
>sp|Q9DD16|NUD22_MOUSE Nucleoside diphosphate-linked moiety X motif 22 OS=Mus musculus
GN=Nudt22 PE=2 SV=1
Length = 308
Score = 103 bits (257), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 100/201 (49%), Gaps = 15/201 (7%)
Query: 20 SPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQKFRYGGHIMRGEGGS 79
S +V+V ++DR P P + +I+ IW++R Q +F+ KFR + S
Sbjct: 17 SQEQVAVELSPAHDRRPLPGGD--KAITAIWETRQQAQPWIFDAPKFRLHSATLVS---S 71
Query: 80 SVESHVCLHLGLTDYRTFVGTNLNPLWEKFLVPSEDDVIQCQ-HTASPLGNGAVVETSDK 138
S E + LHLGLT YR F+GTN + D Q + A PLG GA + T+D
Sbjct: 72 SPEPQLLLHLGLTSYRDFLGTNWSSSASWLRQQGAADWGDKQAYLADPLGVGAALVTADD 131
Query: 139 KILLLQRSNNVGEFPGHFVFPGGHPEPQ---DAGITSHPCGSTDSEFINHKVSQEMFDSI 195
++ L+RS V E PG PGGHPEPQ GI H + V +E+F S+
Sbjct: 132 FLVFLRRSQQVAEAPGLVDVPGGHPEPQALCSGGIPRH------KDLPGLLVVRELFSSV 185
Query: 196 TREVVEEIGVPSESLVSYSLL 216
+E+ +E+ +P +L LL
Sbjct: 186 LQEICDEVNLPLHTLSQPLLL 206
>sp|Q5PQ04|NUD17_XENLA Nucleoside diphosphate-linked moiety X motif 17 OS=Xenopus laevis
GN=nudt17 PE=2 SV=1
Length = 296
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 23/101 (22%)
Query: 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHK 186
+G +V++ +KK+LL +RS ++ FP +V PGGH E
Sbjct: 95 VGVAVLVQSINKKVLLTRRSKSLNIFPNVWVPPGGHVE---------------------- 132
Query: 187 VSQEMFDSITREVVEEIGVPSESLVSYSLLIRYQVVVPALL 227
+ +++ ++ RE+ EE G+ + VS+S+L ++ P LL
Sbjct: 133 LGEQLLEAGLRELQEETGLRLQE-VSWSMLGLWESAFPPLL 172
>sp|Q5M8V2|NUD17_XENTR Nucleoside diphosphate-linked moiety X motif 17 OS=Xenopus
tropicalis GN=nudt17 PE=2 SV=2
Length = 301
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 23/101 (22%)
Query: 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHK 186
+G +V++ +KK+LL +RS ++ FP +V PGGH EP
Sbjct: 95 VGVAVLVQSVNKKVLLTRRSKSLNIFPNVWVPPGGHVEP--------------------- 133
Query: 187 VSQEMFDSITREVVEEIGVPSESLVSYSLLIRYQVVVPALL 227
+++ ++ RE+ EE G+ + V + +L ++ P LL
Sbjct: 134 -GEQLLEAGLRELREETGLRLQG-VPWCMLGLWESAFPPLL 172
>sp|Q4V8V2|NUD17_DANRE Nucleoside diphosphate-linked moiety X motif 17 OS=Danio rerio
GN=nudt17 PE=2 SV=1
Length = 300
Score = 39.3 bits (90), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 54/107 (50%), Gaps = 27/107 (25%)
Query: 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHK 186
+G +++++++K+LL +R++++ FP +V PGGH E
Sbjct: 93 VGVAVLLQSANQKLLLTRRASSLRSFPNVWVPPGGHVE---------------------- 130
Query: 187 VSQEMFDSITREVVEEIGV---PSESLVSYSLLIRYQVVVPALLLCG 230
+ +++ D+ RE++EE G+ P E + LL ++ V P +L G
Sbjct: 131 LDEKLLDAGLRELLEETGLNLSPDE--ICSRLLGLWESVYPPMLTIG 175
>sp|Q5PQ50|NUD19_XENLA Nucleoside diphosphate-linked moiety X motif 19, mitochondrial
OS=Xenopus laevis GN=nudt19 PE=2 SV=1
Length = 380
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 135 TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQD 167
TSD ++LLL+RS G P FVFPGG+ E D
Sbjct: 41 TSDYEVLLLKRSQKSGFMPNAFVFPGGNIESSD 73
>sp|A4FUG7|NUD17_BOVIN Nucleoside diphosphate-linked moiety X motif 17 OS=Bos taurus
GN=NUDT17 PE=2 SV=1
Length = 302
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 22/79 (27%)
Query: 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHK 186
LG ++++SD+ +LL +R++ + P +V PGGH EP +
Sbjct: 94 LGVAVILQSSDQTVLLTRRTSTLNISPNLWVPPGGHVEPDE------------------- 134
Query: 187 VSQEMFDSITREVVEEIGV 205
E+ D RE+ EE G+
Sbjct: 135 ---ELLDGGLRELWEESGL 150
>sp|P0C025|NUD17_HUMAN Nucleoside diphosphate-linked moiety X motif 17 OS=Homo sapiens
GN=NUDT17 PE=2 SV=2
Length = 328
Score = 35.8 bits (81), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 22/79 (27%)
Query: 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHK 186
LG ++++SDK +LL +R+ + P +V PGGH E
Sbjct: 93 LGVAVILQSSDKTVLLTRRARTLSVSPNLWVPPGGHVE---------------------- 130
Query: 187 VSQEMFDSITREVVEEIGV 205
+ +E+ D RE+ EE G+
Sbjct: 131 LEEELLDGGLRELWEESGL 149
>sp|Q8CH40|NUDT6_MOUSE Nucleoside diphosphate-linked moiety X motif 6 OS=Mus musculus
GN=Nudt6 PE=2 SV=1
Length = 313
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 25/79 (31%)
Query: 130 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQ 189
GAV + S +K+L++Q N + + FPGG EP +
Sbjct: 145 GAVFDVSTRKVLVVQDRNKLKNM---WKFPGGLSEP----------------------GE 179
Query: 190 EMFDSITREVVEEIGVPSE 208
++ D+ REV EE GV SE
Sbjct: 180 DIADTAVREVFEETGVKSE 198
>sp|P53370|NUDT6_HUMAN Nucleoside diphosphate-linked moiety X motif 6 OS=Homo sapiens
GN=NUDT6 PE=1 SV=2
Length = 316
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 25/79 (31%)
Query: 130 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQ 189
GAV + S +KIL++Q N + + FPGG EP+ +
Sbjct: 148 GAVFDESTRKILVVQDRNKLKNM---WKFPGGLSEPE----------------------E 182
Query: 190 EMFDSITREVVEEIGVPSE 208
++ D+ REV EE G+ SE
Sbjct: 183 DIGDTAVREVFEETGIKSE 201
>sp|P70563|NUDT6_RAT Nucleoside diphosphate-linked moiety X motif 6 OS=Rattus norvegicus
GN=Nudt6 PE=1 SV=1
Length = 313
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 25/79 (31%)
Query: 130 GAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQ 189
GAV + S +K+L++Q N + + FPGG EP +
Sbjct: 145 GAVFDVSTRKVLVVQDRNKLKNM---WKFPGGLSEP----------------------GE 179
Query: 190 EMFDSITREVVEEIGVPSE 208
++ D+ REV EE GV SE
Sbjct: 180 DIGDTAVREVFEETGVKSE 198
>sp|O70244|CUBN_RAT Cubilin OS=Rattus norvegicus GN=Cubn PE=1 SV=2
Length = 3623
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 26 VVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLF 61
+ FD ++ R+P D+ +NS ++W+ R+ INK+L
Sbjct: 2845 ISFDSNF-RIPSSDSQCQNSFVKVWEGRLMINKTLL 2879
>sp|Q9CWD3|NUD17_MOUSE Nucleoside diphosphate-linked moiety X motif 17 OS=Mus musculus
GN=Nudt17 PE=2 SV=1
Length = 296
Score = 34.3 bits (77), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQD 167
LG ++++SD+ +LL +R+ + P +V PGGH EP +
Sbjct: 93 LGVAVILQSSDQTVLLTRRTCTLRISPNLWVPPGGHMEPDE 133
>sp|A1JMC0|NUDL_YERE8 Uncharacterized Nudix hydrolase NudL OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=nudL PE=3
SV=1
Length = 195
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 21/79 (26%)
Query: 132 VVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEM 191
+V + +LL +RS+++ + G FPGG +PQD+ +
Sbjct: 43 IVCRPEPTLLLTRRSDHLRKHAGQVAFPGGKADPQDSS---------------------L 81
Query: 192 FDSITREVVEEIGVPSESL 210
++ RE EE+ +P+ ++
Sbjct: 82 IETALREAEEEVAIPASAV 100
>sp|B1JP41|NUDL_YERPY Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis
serotype O:3 (strain YPIII) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|Q66BW8|NUDL_YERPS Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis
serotype I (strain IP32953) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|A4TKD0|NUDL_YERPP Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis (strain
Pestoides F) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|Q1CH51|NUDL_YERPN Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua
(strain Nepal516) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|A9R5X2|NUDL_YERPG Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua
(strain Angola) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|Q7CHW2|NUDL_YERPE Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis GN=nudL
PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|B2K0H0|NUDL_YERPB Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis
serotype IB (strain PB1/+) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|Q1C8W1|NUDL_YERPA Uncharacterized Nudix hydrolase NudL OS=Yersinia pestis bv. Antiqua
(strain Antiqua) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|A7FJ95|NUDL_YERP3 Uncharacterized Nudix hydrolase NudL OS=Yersinia pseudotuberculosis
serotype O:1b (strain IP 31758) GN=nudL PE=3 SV=1
Length = 199
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 26/102 (25%)
Query: 111 VPSEDDVIQCQHTASPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEP 165
+P D+V+ H S A V + +LL +R++++ + G FPGG +P
Sbjct: 21 LPQPDNVLTHSHYFSATNRRAAVLIPIICRPEPTLLLTRRADHLRKHAGQVAFPGGKADP 80
Query: 166 QDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207
D Q + + RE EE+ +P+
Sbjct: 81 DD---------------------QSLISTALREAEEEVAIPA 101
>sp|Q58549|ADPP_METJA ADP-ribose pyrophosphatase OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=nudF PE=1 SV=1
Length = 169
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 24/70 (34%)
Query: 136 SDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSI 195
D KILL++R NN F G F PGG E CG T E ++
Sbjct: 51 KDNKILLIKRKNN--PFKGCFALPGGFVE----------CGETVEE------------AV 86
Query: 196 TREVVEEIGV 205
RE+ EE G+
Sbjct: 87 VREIKEETGL 96
>sp|O68006|BACA_BACLI Bacitracin synthase 1 OS=Bacillus licheniformis GN=bacA PE=3 SV=1
Length = 5255
Score = 33.5 bits (75), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 23 EVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQKFRYGGHIMRG 75
E SV D Y+ P + +E + IW+ + INK N F GGH ++
Sbjct: 2605 ERSVTMDRRYEA---PRDQMEEKLVSIWEEALGINKIGINSHFFEAGGHSLKA 2654
>sp|A4WBH1|NUDL_ENT38 Uncharacterized Nudix hydrolase NudL OS=Enterobacter sp. (strain
638) GN=nudL PE=3 SV=1
Length = 192
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 132 VVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEM 191
+V +LL +R++++ + PG FPGG + DA + + E
Sbjct: 38 LVRREQPGLLLTKRASHMRKHPGQVAFPGGAVDSTDASLIAAALREAHEEV--------- 88
Query: 192 FDSITREVVEEIGV--PSESLVSYSL 215
+I EVVE IGV P +S+ + +
Sbjct: 89 --AIPPEVVEIIGVLPPVDSVTGFQV 112
>sp|A8AFP5|NUDL_CITK8 Uncharacterized Nudix hydrolase NudL OS=Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nudL PE=3 SV=1
Length = 192
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 21/79 (26%)
Query: 132 VVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEM 191
VV + +LL QRS + + G FPGG + DA + +
Sbjct: 38 VVRRARPGLLLTQRSARLRKHAGQVAFPGGAVDSSDASLIA------------------- 78
Query: 192 FDSITREVVEEIGVPSESL 210
+ RE EE+ +P ES+
Sbjct: 79 --AALREAQEEVAIPPESV 95
>sp|Q3TD49|SPP2B_MOUSE Signal peptide peptidase-like 2B OS=Mus musculus GN=Sppl2b PE=2
SV=2
Length = 578
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 177 STDSEFINHKVSQEMFDSITREVVEEIGVPSESLVSYSLLIRYQVVVPALLLCGY 231
S ++H+ Q++F REV+ + PSE ++ Y+++I + + V + + GY
Sbjct: 131 SIPVALLSHRDLQDIFRRFGREVMVALYAPSEPVMDYNMVIIFVMAVGTVAIGGY 185
>sp|Q7M0H3|NUD19_MUSCR Nucleoside diphosphate-linked moiety X motif 19, mitochondrial
OS=Mus caroli GN=Nudt19 PE=2 SV=1
Length = 357
Score = 32.0 bits (71), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 139 KILLLQRSNNVGEFPGHFVFPGG 161
++LLLQRS N PG VFPGG
Sbjct: 28 RLLLLQRSQNQRFIPGAHVFPGG 50
>sp|Q5ZL13|NUD19_CHICK Nucleoside diphosphate-linked moiety X motif 19, mitochondrial
OS=Gallus gallus GN=NUDT19 PE=2 SV=1
Length = 378
Score = 32.0 bits (71), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Query: 121 QHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQD 167
+ + SPLG D ++L LQRS+ G P VFPGG E D
Sbjct: 23 RRSPSPLG------PCDYELLFLQRSSRSGFMPSAHVFPGGLVEAAD 63
>sp|O60155|YHY6_SCHPO Putative proline--tRNA ligase C19C7.06 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC19C7.06 PE=3 SV=1
Length = 716
Score = 31.6 bits (70), Expect = 5.2, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 16 PHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQKFRYGGHIMR 74
P+ ++V+ V ++++++P P NNLE +S++ +++Q N ++ K H+++
Sbjct: 567 PNDAKKNQVTAVRRDTFEKIPVPLNNLEKGVSDLL-AKIQTN--MYETAKAERDAHVVK 622
>sp|Q92350|YDH5_SCHPO Probable nudix hydrolase C6G9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC6G9.05 PE=3 SV=1
Length = 285
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 132 VVETSD-KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAG 169
+V TS +LL QRS N+ G FPGG EP D
Sbjct: 123 LVNTSQGASLLLTQRSPNLRSHAGQMCFPGGRVEPSDGS 161
>sp|Q8L7W2|NUDT8_ARATH Nudix hydrolase 8 OS=Arabidopsis thaliana GN=NUDT8 PE=2 SV=2
Length = 369
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 42/100 (42%), Gaps = 22/100 (22%)
Query: 109 FLVPSEDDVIQCQHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDA 168
+ +P E+ + + + +G G V K++L++Q + P
Sbjct: 173 YWIPEEEPSMLPANASHQVGVGGFVLNQHKEVLVVQEK---------------YCAPSIT 217
Query: 169 GITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSE 208
G+ P G FIN S+E+F REV EE GV +E
Sbjct: 218 GLWKLPTG-----FINE--SEEIFSGAVREVKEETGVDTE 250
>sp|Q01317|NUC2_NEUCR Ankyrin repeat protein nuc-2 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=nuc-2 PE=4 SV=2
Length = 1066
Score = 31.2 bits (69), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 111 VPSEDDVIQ--CQHTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDA 168
+ S DD+ + C H A+ GN V+E K + +R++ G P H+ G + DA
Sbjct: 296 IQSWDDINERNCLHQAAIYGNSFVLEYGLSKGVDAERTDAYGRVPLHYASMHGRLDMIDA 355
Query: 169 GITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204
+ + P I+H + SI R +E +G
Sbjct: 356 LLNASP---KTINLIDHDNFTPLVHSIVRNHLECVG 388
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,596,943
Number of Sequences: 539616
Number of extensions: 4244198
Number of successful extensions: 9888
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 9854
Number of HSP's gapped (non-prelim): 60
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)