Query 026577
Match_columns 236
No_of_seqs 215 out of 1416
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 16:52:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026577.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026577hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fsp_A A/G-specific adenine gl 99.7 7.7E-19 2.6E-23 161.0 -2.4 187 14-235 121-324 (369)
2 3grn_A MUTT related protein; s 99.6 4.6E-14 1.6E-18 112.2 12.5 84 126-234 8-93 (153)
3 1rya_A GDP-mannose mannosyl hy 99.5 1.2E-13 4.1E-18 109.8 12.2 84 127-235 19-112 (160)
4 3ees_A Probable pyrophosphohyd 99.5 1.1E-13 3.8E-18 108.8 10.4 83 126-234 21-105 (153)
5 1sjy_A MUTT/nudix family prote 99.5 2.4E-13 8.3E-18 107.9 10.6 85 126-235 13-102 (159)
6 3gwy_A Putative CTP pyrophosph 99.5 2.7E-13 9.1E-18 106.1 9.8 81 128-235 8-92 (140)
7 1vcd_A NDX1; nudix protein, di 99.5 2.8E-13 9.6E-18 103.5 9.3 78 126-234 2-81 (126)
8 3r03_A Nudix hydrolase; struct 99.4 4.9E-13 1.7E-17 104.5 10.8 83 128-234 10-94 (144)
9 2fkb_A Putative nudix hydrolas 99.4 8.9E-13 3E-17 107.3 12.5 62 127-210 38-100 (180)
10 1hzt_A Isopentenyl diphosphate 99.4 3E-13 1E-17 111.7 9.8 62 127-210 33-95 (190)
11 3i7u_A AP4A hydrolase; nudix p 99.4 1.8E-13 6.2E-18 107.7 8.1 56 126-210 4-59 (134)
12 4dyw_A MUTT/nudix family prote 99.4 6.7E-13 2.3E-17 106.4 11.0 82 125-234 28-113 (157)
13 3oga_A Nucleoside triphosphata 99.4 1.9E-13 6.5E-18 109.9 7.8 63 125-209 26-88 (165)
14 3shd_A Phosphatase NUDJ; nudix 99.4 8.3E-13 2.8E-17 104.5 11.0 79 127-234 6-87 (153)
15 2rrk_A ORF135, CTP pyrophospho 99.4 5.9E-13 2E-17 103.4 9.6 81 128-234 10-92 (140)
16 3hhj_A Mutator MUTT protein; n 99.4 6.3E-13 2.1E-17 106.1 10.0 84 127-234 30-115 (158)
17 1ktg_A Diadenosine tetraphosph 99.4 8.5E-13 2.9E-17 102.4 10.2 83 127-235 4-92 (138)
18 2o1c_A DATP pyrophosphohydrola 99.4 9.6E-13 3.3E-17 102.9 10.2 60 124-209 7-67 (150)
19 3gg6_A Nudix motif 18, nucleos 99.4 4.7E-13 1.6E-17 106.4 8.2 80 127-234 21-100 (156)
20 2yvp_A NDX2, MUTT/nudix family 99.4 1.7E-13 5.7E-18 112.2 5.7 63 125-210 40-102 (182)
21 3q93_A 7,8-dihydro-8-oxoguanin 99.4 1.4E-12 4.9E-17 106.8 11.3 84 124-234 22-109 (176)
22 2pbt_A AP4A hydrolase; nudix p 99.4 7.1E-13 2.4E-17 102.1 8.4 67 126-224 4-70 (134)
23 1q27_A Putative nudix hydrolas 99.4 6.7E-13 2.3E-17 107.2 8.6 63 126-210 34-97 (171)
24 1mut_A MUTT, nucleoside tripho 99.4 2.7E-13 9.2E-18 103.7 5.8 78 131-234 9-88 (129)
25 2b0v_A Nudix hydrolase; struct 99.4 1.2E-12 4.2E-17 103.2 9.6 70 127-224 9-78 (153)
26 2w4e_A MUTT/nudix family prote 99.4 4.5E-13 1.5E-17 106.0 6.9 63 125-210 4-66 (145)
27 1nqz_A COA pyrophosphatase (MU 99.4 1.4E-12 4.6E-17 107.9 10.0 83 127-234 35-121 (194)
28 3exq_A Nudix family hydrolase; 99.4 1.5E-12 5E-17 104.8 8.7 81 127-234 11-96 (161)
29 3cng_A Nudix hydrolase; struct 99.4 3.8E-12 1.3E-16 105.3 11.1 81 127-235 41-121 (189)
30 1mk1_A ADPR pyrophosphatase; n 99.4 1.3E-12 4.3E-17 109.9 8.2 63 125-210 42-105 (207)
31 2yyh_A MUTT domain, 8-OXO-DGTP 99.4 4.3E-12 1.5E-16 99.0 10.5 80 126-234 9-96 (139)
32 3son_A Hypothetical nudix hydr 99.4 1.5E-12 5.1E-17 102.7 7.7 58 125-209 4-64 (149)
33 3f6a_A Hydrolase, nudix family 99.4 1.4E-12 4.6E-17 104.4 7.5 59 125-211 5-63 (159)
34 1f3y_A Diadenosine 5',5'''-P1, 99.3 1.2E-12 4E-17 104.2 6.7 57 126-208 14-70 (165)
35 3eds_A MUTT/nudix family prote 99.3 9.6E-13 3.3E-17 104.9 6.0 57 126-210 21-77 (153)
36 3u53_A BIS(5'-nucleosyl)-tetra 99.3 5.9E-12 2E-16 100.5 10.5 50 135-210 21-70 (155)
37 3id9_A MUTT/nudix family prote 99.3 3.4E-12 1.2E-16 103.1 9.2 80 125-234 22-103 (171)
38 1vhz_A ADP compounds hydrolase 99.3 3E-12 1E-16 107.2 8.8 62 125-210 48-109 (198)
39 3f13_A Putative nudix hydrolas 99.3 5.5E-12 1.9E-16 102.6 9.6 76 126-234 15-90 (163)
40 2fb1_A Conserved hypothetical 99.3 4.8E-12 1.7E-16 108.3 9.3 83 126-235 13-102 (226)
41 2pqv_A MUTT/nudix family prote 99.3 6.9E-12 2.4E-16 99.4 9.2 53 127-209 20-72 (154)
42 1v8y_A ADP-ribose pyrophosphat 99.3 3.9E-12 1.3E-16 103.0 7.8 60 125-209 33-92 (170)
43 3fcm_A Hydrolase, nudix family 99.3 1E-11 3.4E-16 103.3 10.4 55 125-206 44-99 (197)
44 3i9x_A MUTT/nudix family prote 99.3 9.6E-12 3.3E-16 102.4 10.2 70 127-221 28-109 (187)
45 3fk9_A Mutator MUTT protein; s 99.3 7.1E-12 2.4E-16 103.9 9.4 75 129-234 7-88 (188)
46 1vk6_A NADH pyrophosphatase; 1 99.3 5.5E-12 1.9E-16 111.1 9.1 85 123-235 136-220 (269)
47 2fvv_A Diphosphoinositol polyp 99.3 5.7E-12 1.9E-16 105.4 8.3 65 127-220 41-107 (194)
48 1k2e_A Nudix homolog; nudix/MU 99.3 1.9E-12 6.5E-17 103.5 5.2 55 128-210 3-57 (156)
49 1x51_A A/G-specific adenine DN 99.3 1E-11 3.4E-16 98.9 8.4 81 128-234 21-108 (155)
50 2b06_A MUTT/nudix family prote 99.3 1E-11 3.6E-16 98.3 8.4 80 126-234 8-94 (155)
51 3gz5_A MUTT/nudix family prote 99.3 1.6E-11 5.3E-16 106.1 10.0 84 125-235 21-113 (240)
52 3q1p_A Phosphohydrolase (MUTT/ 99.3 1.4E-11 4.6E-16 103.5 9.0 65 125-220 67-131 (205)
53 2kdv_A RNA pyrophosphohydrolas 99.3 8.7E-12 3E-16 101.0 7.3 57 127-210 9-65 (164)
54 3h95_A Nucleoside diphosphate- 99.2 7.1E-12 2.4E-16 104.4 6.5 62 122-208 22-84 (199)
55 2azw_A MUTT/nudix family prote 99.2 1.1E-11 3.6E-16 97.1 7.0 58 125-210 17-75 (148)
56 2jvb_A Protein PSU1, mRNA-deca 99.2 6.6E-12 2.2E-16 98.5 5.6 55 129-210 7-62 (146)
57 1g0s_A Hypothetical 23.7 kDa p 99.2 1.8E-11 6.2E-16 103.2 8.0 64 125-210 56-124 (209)
58 3o8s_A Nudix hydrolase, ADP-ri 99.2 2.1E-11 7.1E-16 102.5 8.0 64 125-220 69-132 (206)
59 1u20_A U8 snoRNA-binding prote 99.2 1.8E-11 6.1E-16 103.6 6.5 79 129-235 47-129 (212)
60 2dho_A Isopentenyl-diphosphate 99.2 9.5E-11 3.3E-15 101.1 10.7 65 126-209 59-130 (235)
61 2fml_A MUTT/nudix family prote 99.2 1.3E-10 4.6E-15 102.0 11.1 86 125-235 38-132 (273)
62 2pny_A Isopentenyl-diphosphate 99.2 1.1E-10 3.8E-15 101.4 10.4 64 127-209 71-141 (246)
63 2a6t_A SPAC19A8.12; alpha/beta 99.2 8.6E-11 2.9E-15 103.4 9.7 60 126-211 101-161 (271)
64 3o6z_A GDP-mannose pyrophospha 99.2 7.9E-11 2.7E-15 97.8 8.5 63 125-210 44-112 (191)
65 2qjt_B Nicotinamide-nucleotide 99.1 1.1E-10 3.8E-15 104.6 9.3 58 127-209 209-266 (352)
66 2dsc_A ADP-sugar pyrophosphata 99.1 8.5E-11 2.9E-15 99.0 7.7 49 138-209 77-125 (212)
67 2qjo_A Bifunctional NMN adenyl 99.1 9.7E-11 3.3E-15 104.3 7.8 58 127-209 204-261 (341)
68 3qsj_A Nudix hydrolase; struct 99.1 6.1E-11 2.1E-15 102.4 5.5 68 139-208 25-92 (232)
69 3q91_A Uridine diphosphate glu 99.1 2.1E-10 7.2E-15 97.9 8.6 62 123-207 33-127 (218)
70 3e57_A Uncharacterized protein 99.1 8.7E-11 3E-15 100.1 6.0 72 131-221 72-146 (211)
71 3dup_A MUTT/nudix family prote 99.0 5.2E-10 1.8E-14 100.0 8.3 63 126-210 118-184 (300)
72 3fjy_A Probable MUTT1 protein; 99.0 1.2E-09 4.2E-14 99.1 9.2 49 135-210 35-83 (364)
73 2xsq_A U8 snoRNA-decapping enz 98.9 1.2E-09 4.3E-14 93.0 7.3 70 138-235 65-137 (217)
74 3kvh_A Protein syndesmos; NUDT 98.7 1.3E-08 4.4E-13 85.6 5.7 58 154-236 54-114 (214)
75 1q33_A Pyrophosphatase, ADP-ri 98.7 2E-08 6.7E-13 89.1 7.0 42 139-207 140-181 (292)
76 3bho_A Cleavage and polyadenyl 98.3 1.7E-06 5.7E-11 73.2 8.7 55 124-206 56-113 (208)
77 3rh7_A Hypothetical oxidoreduc 98.2 1.3E-06 4.4E-11 78.6 6.7 75 125-235 182-257 (321)
78 1kea_A Possible G-T mismatches 91.4 0.0018 6E-08 54.9 -8.2 89 13-109 117-207 (221)
79 3n5n_X A/G-specific adenine DN 89.7 0.0019 6.6E-08 57.1 -9.8 89 13-109 131-222 (287)
80 1kg2_A A/G-specific adenine gl 85.2 0.0028 9.6E-08 53.7 -11.1 90 13-110 111-203 (225)
81 2abk_A Endonuclease III; DNA-r 84.9 0.0039 1.3E-07 52.3 -10.3 86 14-109 112-197 (211)
82 4e9f_A Methyl-CPG-binding doma 83.2 0.18 6.1E-06 40.6 -0.7 40 14-55 107-147 (161)
83 1orn_A Endonuclease III; DNA r 80.3 0.0066 2.2E-07 51.6 -10.7 88 13-109 115-202 (226)
84 1pu6_A 3-methyladenine DNA gly 46.1 2.9 9.8E-05 34.8 -1.1 37 13-52 123-159 (218)
85 4b21_A Probable DNA-3-methylad 32.0 7.9 0.00027 32.5 -0.6 40 13-53 152-191 (232)
86 3fhg_A Mjogg, N-glycosylase/DN 23.2 11 0.00036 31.0 -1.3 36 14-53 120-156 (207)
87 3s6i_A DNA-3-methyladenine gly 20.9 17 0.00058 30.3 -0.6 39 13-52 141-179 (228)
No 1
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.69 E-value=7.7e-19 Score=160.98 Aligned_cols=187 Identities=14% Similarity=0.179 Sum_probs=125.5
Q ss_pred cCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHHHHhhCCCc-cc--CceEEEeeeEEecCCCCCCcceEEEecC
Q 026577 14 SCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSL-FN--GQKFRYGGHIMRGEGGSSVESHVCLHLG 90 (236)
Q Consensus 14 ~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~~~~~~p~l-fn--g~kfrl~~~~~~~~~~~~~~~~~~l~lg 90 (236)
...||||++|++++++.+|++ |.+. ++.+|.|+..+.-.-.... +. ...+.-....+.+.+..++.+++.|.+|
T Consensus 121 ~~l~GIG~~tA~~il~~~~~~-~~~~--vD~~v~Rv~~rl~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~G 197 (369)
T 3fsp_A 121 SRLKGVGPYTVGAVLSLAYGV-PEPA--VDGNVMRVLSRLFLVTDDIAKPSTRKRFEQIVREIMAYENPGAFNEALIELG 197 (369)
T ss_dssp HTSTTCCHHHHHHHHHHHHCC-CCCC--CCHHHHHHHHHHTTCCSCTTSHHHHHHHHHHHHHHCCSSSHHHHHHHHHHHH
T ss_pred hcCCCcCHHHHHHHHHHHCCC-Cccc--ccHHHHHHHHHHcCcccCccccchHHHHHHHHHHhCChhhHHHHHHHHHHHH
Confidence 367999999999999999999 7554 8999999977553211100 10 0112211122223344566788999999
Q ss_pred CcccceeeccCCChhhhhhc----cCCC--Cc----hhhcc--ccCCceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEe
Q 026577 91 LTDYRTFVGTNLNPLWEKFL----VPSE--DD----VIQCQ--HTASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVF 158 (236)
Q Consensus 91 ~T~Yr~fv~t~~~p~~~~~~----~~~~--~~----~~~~~--~~~~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~f 158 (236)
.+ +|+..+|.|..|. |... +. +.+.+ .......+++++.+.+|+|||.||..+ +.++|+|+|
T Consensus 198 ~~-----~C~~~~P~C~~Cpl~~~C~~~~~~~~~~~PvK~~kk~~~~~~~~~~vi~~~~g~vLL~rR~~~-g~~~GlWef 271 (369)
T 3fsp_A 198 AL-----VCTPRRPSCLLCPVQAYCQAFAEGVAEELPVKMKKTAVKQVPLAVAVLADDEGRVLIRKRDST-GLLANLWEF 271 (369)
T ss_dssp HH-----TSCSSSCCTTTCTTGGGCHHHHHTCGGGCSCCCCCCCCEEEEEEEEEEECSSSEEEEEECCSS-STTTTCEEC
T ss_pred HH-----hcCCCCCCCCCCCChhhhHHHhcCCcccCCccccccCcceEEEEEEEEEeCCCEEEEEECCCC-CCcCCcccC
Confidence 99 9999999987652 2111 00 01111 111223455666668899999999854 689999999
Q ss_pred ccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCCCCccceeEEeeeeeecc--eeeeeEEEEe
Q 026577 159 PGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESLVSYSLLIRYQVVVPA--LLLCGYMCTS 235 (236)
Q Consensus 159 PGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~l~~~~ll~~~~~~~~~--~~~~~~~~~~ 235 (236)
|||++|++ + +.+++.||+.||||+.+.... +++.+.+.+++ +.+..|.|..
T Consensus 272 PGG~ve~g-t----------------------~~~al~REl~EE~Gl~v~~~~---~l~~~~h~~~h~~~~~~~~~~~~ 324 (369)
T 3fsp_A 272 PSCETDGA-D----------------------GKEKLEQMVGEQYGLQVELTE---PIVSFEHAFSHLVWQLTVFPGRL 324 (369)
T ss_dssp CEEECSSS-C----------------------THHHHHHHHTTSSSCCEEECC---CCCEEEEECSSEEEEEEEEEEEE
T ss_pred CCcccCCC-C----------------------cHHHHHHHHHHHhCCceeeec---ccccEEEEcceEEEEEEEEEEEE
Confidence 99999999 7 789999999999999887543 34445555554 4566666653
No 2
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.55 E-value=4.6e-14 Score=112.15 Aligned_cols=84 Identities=21% Similarity=0.340 Sum_probs=66.5
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
.++|++++.+.+|++||+||+...+.++|+|.||||++|++|+ +.+||+||+.||||+
T Consensus 8 ~~~v~~vi~~~~~~vLL~~r~~~~~~~~g~w~~PgG~ve~gE~----------------------~~~aa~REl~EE~Gl 65 (153)
T 3grn_A 8 IISVYALIRNEKGEFLLLRRSENSRTNAGKWDLPGGKVNPDES----------------------LKEGVAREVWEETGI 65 (153)
T ss_dssp EEEEEEEEECTTCCEEEEEECTTCSSSTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred EEEEEEEEEcCCCcEEEEEEcCCCCCCCCeEECceeecCCCCC----------------------HHHHHHhhhhhhhCc
Confidence 4577788888889999999997656899999999999999998 999999999999999
Q ss_pred CCCCCccceeEEeeeeeecc--eeeeeEEEE
Q 026577 206 PSESLVSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 206 ~~~~l~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
.+.... +++.+...++. .....|.|.
T Consensus 66 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 93 (153)
T 3grn_A 66 TMVPGD---IAGQVNFELTEKKVIAIVFDGG 93 (153)
T ss_dssp CCCCCS---EEEEEEEECSSCEEEEEEEEEE
T ss_pred Eeecce---EEEEEEEecCCceEEEEEEEEE
Confidence 987543 45555555554 344455544
No 3
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.52 E-value=1.2e-13 Score=109.81 Aligned_cols=84 Identities=19% Similarity=0.299 Sum_probs=64.7
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
++|++++++.+|++||+||+.. .++|+|.||||++|++|+ +.+||+||+.||||+.
T Consensus 19 ~~v~~vi~~~~~~vLl~~r~~~--~~~g~w~~PgG~ve~gE~----------------------~~~aa~REl~EEtGl~ 74 (160)
T 1rya_A 19 VSLDFIVENSRGEFLLGKRTNR--PAQGYWFVPGGRVQKDET----------------------LEAAFERLTMAELGLR 74 (160)
T ss_dssp EEEEEEEECTTSCEEEEEECSS--SSTTSEECCEEECCTTCC----------------------HHHHHHHHHHHHHSSC
T ss_pred EEEEEEEEcCCCEEEEEeccCC--CCCCEEECCccccCCCCC----------------------HHHHHHHHHHHHHCCC
Confidence 5778888877899999999864 468999999999999998 9999999999999998
Q ss_pred CCCCccceeEEeeeeeec----------ceeeeeEEEEe
Q 026577 207 SESLVSYSLLIRYQVVVP----------ALLLCGYMCTS 235 (236)
Q Consensus 207 ~~~l~~~~ll~~~~~~~~----------~~~~~~~~~~~ 235 (236)
+.. ....+++.+...++ ......|.|..
T Consensus 75 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 112 (160)
T 1rya_A 75 LPI-TAGQFYGVWQHFYDDNFSGTDFTTHYVVLGFRFRV 112 (160)
T ss_dssp CCG-GGSEEEEEEEEEESSBTTBSSSCEEEEEEEEEEEC
T ss_pred CCc-ccceEEEEEeEEEcccccCCCcCcEEEEEEEEEEc
Confidence 641 23345666555444 34555666653
No 4
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.50 E-value=1.1e-13 Score=108.85 Aligned_cols=83 Identities=28% Similarity=0.340 Sum_probs=65.6
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
++.++++++..||++||+||... +.++|+|.||||++|++|+ +.+||+||+.||||+
T Consensus 21 ~~~~~~~i~~~~~~vLl~~r~~~-~~~~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE~Gl 77 (153)
T 3ees_A 21 WIPVVAGFLRKDGKILVGQRPEN-NSLAGQWEFPGGKIENGET----------------------PEEALARELNEELGI 77 (153)
T ss_dssp EEEEEEEEEEETTEEEEEECCTT-STTTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHSC
T ss_pred eEEEEEEEEEECCEEEEEEeCCC-CCCCCeEECCceeeCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 66777777888999999999865 5789999999999999998 999999999999999
Q ss_pred CCCCCccceeEEeeeeeecc--eeeeeEEEE
Q 026577 206 PSESLVSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 206 ~~~~l~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
.+.... ++..+.+.++. ..+..|.|.
T Consensus 78 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 105 (153)
T 3ees_A 78 EAEVGE---LKLACTHSYGDVGILILFYEIL 105 (153)
T ss_dssp EEECCC---EEEEEEEEETTEEEEEEEEEEC
T ss_pred ccccCc---eEEEEEEecCCCeEEEEEEEEE
Confidence 877543 45555555554 344555554
No 5
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.47 E-value=2.4e-13 Score=107.93 Aligned_cols=85 Identities=25% Similarity=0.319 Sum_probs=64.3
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCC--CCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhh
Q 026577 126 PLGNGAVVETSDKKILLLQRSNN--VGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~--~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (236)
..++++++++.+|++||+||+.. .+.++|.|.||||++|++|+ +.++|+||+.|||
T Consensus 13 ~~~~~~vi~~~~~~vLl~~r~~~~~~~~~~~~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEt 70 (159)
T 1sjy_A 13 LRAAGVVLLNERGDILLVQEKGIPGHPEKAGLWHIPSGAVEDGEN----------------------PQDAAVREACEET 70 (159)
T ss_dssp EEEEEEEEBCTTCCEEEEEESCC----CCCCCEECSEEECCTTSC----------------------HHHHHHHHHHHHH
T ss_pred EEeEEEEEEeCCCCEEEEEecccCcCCCCCCeEECCccccCCCCC----------------------HHHHHHHHHHHHH
Confidence 34677777878899999999852 34678999999999999998 9999999999999
Q ss_pred CCCCCCCccceeEEeeeeeecc---eeeeeEEEEe
Q 026577 204 GVPSESLVSYSLLIRYQVVVPA---LLLCGYMCTS 235 (236)
Q Consensus 204 Gl~~~~l~~~~ll~~~~~~~~~---~~~~~~~~~~ 235 (236)
|+.+..+ .+++.+...++. .....|.|..
T Consensus 71 Gl~~~~~---~~l~~~~~~~~~~~~~~~~~f~~~~ 102 (159)
T 1sjy_A 71 GLRVRPV---KFLGAYLGRFPDGVLILRHVWLAEP 102 (159)
T ss_dssp SCCEEEE---EEEEEEEEECTTSCEEEEEEEEEEE
T ss_pred Cccceee---EEEEEEecccCCCceEEEEEEEEEc
Confidence 9997643 345555544443 3555666653
No 6
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.46 E-value=2.7e-13 Score=106.15 Aligned_cols=81 Identities=23% Similarity=0.407 Sum_probs=56.1
Q ss_pred EEEEEEEeCCCeEEEEEEcCCCCC--CCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 128 GNGAVVETSDKKILLLQRSNNVGE--FPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 128 gv~~vl~t~dg~vLl~rRs~~~~~--~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
.+++++. .+|++||+||+.. .. ++|+|.||||++|++|+ +.+||+||+.||||+
T Consensus 8 ~v~~vi~-~~~~vLL~~r~~~-~~~~~~g~w~lPgG~ve~gE~----------------------~~~aa~REl~EE~Gl 63 (140)
T 3gwy_A 8 VVAAVIR-LGEKYLCVQRGQT-KFSYTSFRYEFPGGKVEEGES----------------------LQEALQREIMEEMDY 63 (140)
T ss_dssp EEEEEEE-ETTEEEEEEC----------CCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred EEEEEEE-eCCEEEEEEecCC-CCCCCCCeEECCCccCCCCCC----------------------HHHHHHHHHHHhhCc
Confidence 3444555 4899999999865 34 89999999999999998 999999999999999
Q ss_pred CCCCCccceeEEeeeeeecc--eeeeeEEEEe
Q 026577 206 PSESLVSYSLLIRYQVVVPA--LLLCGYMCTS 235 (236)
Q Consensus 206 ~~~~l~~~~ll~~~~~~~~~--~~~~~~~~~~ 235 (236)
.+... .++..+...++. .....|.|..
T Consensus 64 ~~~~~---~~~~~~~~~~~~~~~~~~~f~~~~ 92 (140)
T 3gwy_A 64 VIEVG---EKLLTVHHTYPDFEITMHAFLCHP 92 (140)
T ss_dssp CEEEE---EEEEEEECCCSSCCEEEEEEEEEE
T ss_pred EEEec---eEEEEEEEEeCCceEEEEEEEEEe
Confidence 87644 345554444443 4555666653
No 7
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.45 E-value=2.8e-13 Score=103.52 Aligned_cols=78 Identities=37% Similarity=0.576 Sum_probs=59.8
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
++++++++++.+|++||+||+. |.|.||||++|++|+ +.++|+||+.||||+
T Consensus 2 ~~~~~~vi~~~~~~vLl~~r~~------g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE~Gl 53 (126)
T 1vcd_A 2 ELGAGGVVFNAKREVLLLRDRM------GFWVFPKGHPEPGES----------------------LEEAAVREVWEETGV 53 (126)
T ss_dssp EEEEEEEEECTTSCEEEEECTT------SCEECCEECCCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred eeEEEEEEEcCCCEEEEEEECC------CCccCCcCcCCCCCC----------------------HHHHHHHHHHHhhCc
Confidence 5688889998899999999873 889999999999998 999999999999999
Q ss_pred CCCCCccceeEEeeeeeecc--eeeeeEEEE
Q 026577 206 PSESLVSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 206 ~~~~l~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
.+... .+++.+....+. .....|.|.
T Consensus 54 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 81 (126)
T 1vcd_A 54 RAEVL---LPLYPTRYVNPKGVEREVHWFLM 81 (126)
T ss_dssp EEEEE---EEEEEEEEECTTSCEEEEEEEEE
T ss_pred Eeeec---cEEeEEEEecCCceEEEEEEEEE
Confidence 87643 334444333332 334455553
No 8
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.45 E-value=4.9e-13 Score=104.45 Aligned_cols=83 Identities=29% Similarity=0.453 Sum_probs=62.1
Q ss_pred EEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 128 GNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 128 gv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
.+++++++.+|++||+||... +.++|+|.||||++|++|+ +.+||+||+.||||+.+
T Consensus 10 ~~~~vi~~~~~~vLl~~r~~~-~~~~g~w~lPgG~ve~gE~----------------------~~~aa~RE~~EE~Gl~~ 66 (144)
T 3r03_A 10 VTAAALIDPDGRVLLAQRPPG-KSLAGLWEFPGGKLEPGET----------------------PEAALVRELAEELGVDT 66 (144)
T ss_dssp EEEEEEBCTTSCEEEEECCTT-SSSTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCCBC
T ss_pred EEEEEEEcCCCEEEEEEeCCC-CCCCCcEECCCcEecCCCC----------------------HHHHHHHHHHHHhCcee
Confidence 455677777899999999855 4789999999999999998 99999999999999998
Q ss_pred CCCccceeEEeeeeeecc--eeeeeEEEE
Q 026577 208 ESLVSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 208 ~~l~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
.... ...+......++. .....|.|.
T Consensus 67 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 94 (144)
T 3r03_A 67 RASC-LAPLAFASHSYDTFHLLMPLYACR 94 (144)
T ss_dssp CGGG-CEEEEEEEEECSSSEEEEEEEEEC
T ss_pred eccc-eEEEEeeeccCCCeEEEEEEEEEE
Confidence 7543 1223223333333 455566654
No 9
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.45 E-value=8.9e-13 Score=107.34 Aligned_cols=62 Identities=26% Similarity=0.407 Sum_probs=54.7
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEe-ccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVF-PGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~f-PGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
.++++++++.+|++||.+|+.....++|+|.| |||++|++|+ +.+||+||+.||||+
T Consensus 38 ~~~~v~i~~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~----------------------~~~aa~REl~EEtGl 95 (180)
T 2fkb_A 38 RATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQ----------------------LLESARREAEEELGI 95 (180)
T ss_dssp EEEEEEEECSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred eEEEEEEECCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 46777788888999999998766667999999 9999999998 999999999999999
Q ss_pred CCCCC
Q 026577 206 PSESL 210 (236)
Q Consensus 206 ~~~~l 210 (236)
....+
T Consensus 96 ~~~~~ 100 (180)
T 2fkb_A 96 AGVPF 100 (180)
T ss_dssp BSCCC
T ss_pred Cccce
Confidence 87654
No 10
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.45 E-value=3e-13 Score=111.66 Aligned_cols=62 Identities=21% Similarity=0.324 Sum_probs=55.5
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEe-ccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVF-PGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~f-PGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
.+|++++++.+|++||.||+.....++|+|.| |||++|++|+ +.+||+||+.||||+
T Consensus 33 ~~v~~~i~~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt----------------------~~~aa~REl~EEtGl 90 (190)
T 1hzt_A 33 LAFSSWLFNAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGES----------------------NEDAVIRRCRYELGV 90 (190)
T ss_dssp ECEEEEEECTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred EEEEEEEEcCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 36777888888999999998766678999999 9999999999 999999999999999
Q ss_pred CCCCC
Q 026577 206 PSESL 210 (236)
Q Consensus 206 ~~~~l 210 (236)
.+..+
T Consensus 91 ~~~~~ 95 (190)
T 1hzt_A 91 EITPP 95 (190)
T ss_dssp CBSCC
T ss_pred Cchhh
Confidence 98765
No 11
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.45 E-value=1.8e-13 Score=107.67 Aligned_cols=56 Identities=34% Similarity=0.545 Sum_probs=47.6
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
.+++++++. .||+|||+||. .|.|.||||++|++|+ +.+||+||+.||||+
T Consensus 4 ~~aag~vv~-~~~~vLL~~r~------~g~W~~PgG~ve~gEt----------------------~~~aa~RE~~EEtGl 54 (134)
T 3i7u_A 4 EFSAGGVLF-KDGEVLLIKTP------SNVWSFPKGNIEPGEK----------------------PEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEE-ETTEEEEEECT------TSCEECCEEECCTTCC----------------------HHHHHHHHHHHHHSE
T ss_pred EEEEEEEEE-ECCEEEEEEeC------CCcEECCeeEecCCCC----------------------HHHHHHHHHHHhcCc
Confidence 346666666 57999999975 2789999999999999 999999999999999
Q ss_pred CCCCC
Q 026577 206 PSESL 210 (236)
Q Consensus 206 ~~~~l 210 (236)
.+..+
T Consensus 55 ~~~~~ 59 (134)
T 3i7u_A 55 KGEIL 59 (134)
T ss_dssp EEEEE
T ss_pred eEEEe
Confidence 87643
No 12
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.44 E-value=6.7e-13 Score=106.37 Aligned_cols=82 Identities=26% Similarity=0.427 Sum_probs=63.1
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
..++|++++.+ ||+|||+||+.. .++|.|.||||++|++|+ +.+||+||+.||||
T Consensus 28 ~~~~v~~vi~~-~~~vLL~~r~~~--~~~~~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 82 (157)
T 4dyw_A 28 PRVGCGAAIVR-DGRILLIKRKRA--PEAGCWGLPGGKVDWLEP----------------------VERAVCREIEEELG 82 (157)
T ss_dssp CEEEEEEEEEE-TTEEEEEEECSS--SSTTCEECCEEECCTTCC----------------------HHHHHHHHHHHHHS
T ss_pred ceeEEEEEEEE-CCEEEEEEecCC--CCCCEEECCcccCCCCCC----------------------HHHHHHHHHHHHHC
Confidence 44677777776 899999999954 378999999999999998 99999999999999
Q ss_pred CCCCCCccceeEEeeeeeec----ceeeeeEEEE
Q 026577 205 VPSESLVSYSLLIRYQVVVP----ALLLCGYMCT 234 (236)
Q Consensus 205 l~~~~l~~~~ll~~~~~~~~----~~~~~~~~~~ 234 (236)
|.+... .++..+...++ ......|.|.
T Consensus 83 l~~~~~---~~~~~~~~~~~~~~~~~~~~~f~~~ 113 (157)
T 4dyw_A 83 IALERA---TLLCVVDHIDAANGEHWVAPVYLAH 113 (157)
T ss_dssp CEEESC---EEEEEEEEEETTTTEEEEEEEEEES
T ss_pred cccccC---cEEEEEEeeccCCCcEEEEEEEEEE
Confidence 988754 34555555542 2344455553
No 13
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.44 E-value=1.9e-13 Score=109.86 Aligned_cols=63 Identities=27% Similarity=0.413 Sum_probs=49.9
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
.+..++++++..+|++||+||+...+.++|+|.||||++|++|+ +.+||+||+.||||
T Consensus 26 ~~~~~~~~ii~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gE~----------------------~~~aa~REl~EEtG 83 (165)
T 3oga_A 26 RQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGER----------------------IEEALRREIREELG 83 (165)
T ss_dssp EEEEEEEEEEEETTEEEEEEECC------CCEECCCEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred ceEEEEEEEEeCCCEEEEEEecCCCCCCCCeEECCccccCCCCC----------------------HHHHHHHHHHHHhC
Confidence 34455566667789999999997767889999999999999998 99999999999999
Q ss_pred CCCCC
Q 026577 205 VPSES 209 (236)
Q Consensus 205 l~~~~ 209 (236)
+.+..
T Consensus 84 l~~~~ 88 (165)
T 3oga_A 84 EQLIL 88 (165)
T ss_dssp SSCCE
T ss_pred CCccc
Confidence 99864
No 14
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.43 E-value=8.3e-13 Score=104.50 Aligned_cols=79 Identities=19% Similarity=0.331 Sum_probs=58.3
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
++|+++ +..+|++||+||+ . ..+|.|.||||++|++|+ +.+||+||+.||||+.
T Consensus 6 ~~v~~i-i~~~~~vLl~~r~-~--~~~~~w~~PgG~ve~gEs----------------------~~~aa~REl~EEtGl~ 59 (153)
T 3shd_A 6 VTVACV-VHAEGKFLVVEET-I--NGKALWNQPAGHLEADET----------------------LVEAAARELWEETGIS 59 (153)
T ss_dssp EEEEEE-EEETTEEEEEEEE-E--TTEEEEECSEEECCTTCC----------------------HHHHHHHHHHHHHCCC
T ss_pred eEEEEE-EEeCCEEEEEEec-C--CCCCCEECCeEEeCCCCC----------------------HHHHHHHHHHHHHCcc
Confidence 345444 4568999999998 2 457899999999999998 9999999999999999
Q ss_pred CCCCccceeEEeeeeeecc---eeeeeEEEE
Q 026577 207 SESLVSYSLLIRYQVVVPA---LLLCGYMCT 234 (236)
Q Consensus 207 ~~~l~~~~ll~~~~~~~~~---~~~~~~~~~ 234 (236)
+... .++..+....+. ....-|.|.
T Consensus 60 ~~~~---~~~~~~~~~~~~~~~~~~~~f~~~ 87 (153)
T 3shd_A 60 AQPQ---HFIRMHQWIAPDKTPFLRFLFAIE 87 (153)
T ss_dssp CCCC---EEEEEEEECCTTSCCEEEEEEEEE
T ss_pred cccC---cEEEEEEEecCCCceEEEEEEEEE
Confidence 8754 345554433332 333456654
No 15
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.42 E-value=5.9e-13 Score=103.36 Aligned_cols=81 Identities=27% Similarity=0.400 Sum_probs=60.6
Q ss_pred EEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 128 GNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 128 gv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
.++++++..+|++||.||+.. +.++|+|+||||++|++|+ +.++|+||+.||||+.+
T Consensus 10 ~~~~~ii~~~~~vLl~~r~~~-~~~~g~w~lPgG~ve~gE~----------------------~~~aa~RE~~EE~Gl~~ 66 (140)
T 2rrk_A 10 EVVAAIIERDGKILLAQRPAQ-SDQAGLWEFAGGKVEPDES----------------------QRQALVRELREELGIEA 66 (140)
T ss_dssp EEEEEEEEETTEEEEEECCSS-CSCCCCEECCEEECCTTSC----------------------HHHHHHHHHHHHSCEEE
T ss_pred eEEEEEEEcCCEEEEEEcCCC-CCCCCEEECCceecCCCCC----------------------HHHHHHHHHHHHHCCee
Confidence 344445567899999999855 4789999999999999998 99999999999999987
Q ss_pred CCCccceeEEeeeeeecc--eeeeeEEEE
Q 026577 208 ESLVSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 208 ~~l~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
..+ .+++.+.+.++. ..+..|.|.
T Consensus 67 ~~~---~~~~~~~~~~~~~~~~~~~~~~~ 92 (140)
T 2rrk_A 67 TVG---EYVASHQREVSGRIIHLHAWHVP 92 (140)
T ss_dssp ECC---EEEEEEEEEETTEEEEEEEEEES
T ss_pred ecc---cEEEEEEEecCCcEEEEEEEEEE
Confidence 644 345555445554 334455553
No 16
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.42 E-value=6.3e-13 Score=106.06 Aligned_cols=84 Identities=27% Similarity=0.389 Sum_probs=63.4
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
..+++++++.+|++||+||... +.++|+|.||||++|++|+ +.+||+||+.||||+.
T Consensus 30 ~~~~~~i~~~~~~vLL~~r~~~-~~~~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEtGl~ 86 (158)
T 3hhj_A 30 IVVACALLDQDNRVLLTQRPEG-KSLAGLWEFPGGKVEQGET----------------------PEASLIRELEEELGVH 86 (158)
T ss_dssp EEEEEEEBCTTSEEEEEECCCT-TSCCCCCBCCEEECCTTCC----------------------HHHHHHHHHHHHHCCB
T ss_pred EEEEEEEEeCCCEEEEEEeCCC-CCCCCEEECCceeecCCCC----------------------HHHHHHHHHHHHhCcE
Confidence 4556677778899999999855 5789999999999999998 9999999999999999
Q ss_pred CCCCccceeEEeeeeeecc--eeeeeEEEE
Q 026577 207 SESLVSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 207 ~~~l~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
+.... ...+..+...++. .....|.|.
T Consensus 87 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 115 (158)
T 3hhj_A 87 VQADN-LFPLTFASHGYETFHLLMPLYFCS 115 (158)
T ss_dssp CCGGG-CEEEEEEEEECSSCEEEEEEEEES
T ss_pred eecce-EEEEEEEeeccCCcEEEEEEEEEE
Confidence 87543 2223334444443 455556654
No 17
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.42 E-value=8.5e-13 Score=102.37 Aligned_cols=83 Identities=23% Similarity=0.272 Sum_probs=58.1
Q ss_pred eEEEEEEEeC---CCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhh
Q 026577 127 LGNGAVVETS---DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (236)
Q Consensus 127 lgv~~vl~t~---dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (236)
.++++++++. ++++||+||+. .+|.|.||||++|++|+ +.+||+||+.|||
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEt 57 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQASY----PPHHWTPPKGHVDPGED----------------------EWQAAIRETKEEA 57 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEESS----TTCCEESSEEECCTTCC----------------------HHHHHHHHHHHHH
T ss_pred EEEEEEEEEecCCCcEEEEEEccC----CCCcEeCCccccCCCCC----------------------HHHHHHHHHHHHH
Confidence 4566677754 46899999972 36899999999999998 9999999999999
Q ss_pred CCCCCCCccc-eeEEeeeeeec--ceeeeeEEEEe
Q 026577 204 GVPSESLVSY-SLLIRYQVVVP--ALLLCGYMCTS 235 (236)
Q Consensus 204 Gl~~~~l~~~-~ll~~~~~~~~--~~~~~~~~~~~ 235 (236)
|+.+..+... .++..+....+ ......|.|..
T Consensus 58 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 92 (138)
T 1ktg_A 58 NITKEQLTIHEDCHETLFYEAKGKPKSVKYWLAKL 92 (138)
T ss_dssp CCCGGGEEEEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCCccceEEeccccceEEEEeCCCceEEEEEEEEe
Confidence 9976654321 22233322232 24555666653
No 18
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.41 E-value=9.6e-13 Score=102.94 Aligned_cols=60 Identities=27% Similarity=0.405 Sum_probs=52.7
Q ss_pred CCceEEEEEEEeCC-CeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHh
Q 026577 124 ASPLGNGAVVETSD-KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEE 202 (236)
Q Consensus 124 ~~~lgv~~vl~t~d-g~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EE 202 (236)
..+++|++++++.+ |++||+||+.. +|.|.||||++|++|+ +.+||+||+.||
T Consensus 7 ~~~~~v~~~i~~~~~~~vLl~~r~~~----~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE 60 (150)
T 2o1c_A 7 KRPVSILVVIYAQDTKRVLMLQRRDD----PDFWQSVTGSVEEGET----------------------APQAAMREVKEE 60 (150)
T ss_dssp BCSEEEEEEEEETTTCEEEEEECSSS----TTCEESEEEECCTTCC----------------------HHHHHHHHHHHH
T ss_pred cCceEEEEEEEeCCCCEEEEEEecCC----CCceECCccccCCCCC----------------------HHHHHHHHHHHH
Confidence 35678888888875 99999998853 6999999999999998 999999999999
Q ss_pred hCCCCCC
Q 026577 203 IGVPSES 209 (236)
Q Consensus 203 tGl~~~~ 209 (236)
||+.+..
T Consensus 61 tGl~~~~ 67 (150)
T 2o1c_A 61 VTIDVVA 67 (150)
T ss_dssp HCCCHHH
T ss_pred hCCCccc
Confidence 9998764
No 19
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.41 E-value=4.7e-13 Score=106.44 Aligned_cols=80 Identities=26% Similarity=0.423 Sum_probs=60.7
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
..+++++++.+|+|||+||+.. .++|.|.||||++|++|+ +.+||+||++||||+.
T Consensus 21 ~~v~~~i~~~~~~vLl~~r~~~--~~~~~w~~PgG~ve~gE~----------------------~~~aa~REl~EEtGl~ 76 (156)
T 3gg6_A 21 YVVLAVFLSEQDEVLLIQEAKR--ECRGSWYLPAGRMEPGET----------------------IVEALQREVKEEAGLH 76 (156)
T ss_dssp EEEEEECBCTTSEEEEEECCCT--TSTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCEE
T ss_pred EEEEEEEEeCCCEEEEEEecCC--CCCCEEECCeeeccCCCC----------------------HHHHHHHHHHHhhCce
Confidence 3566677778899999999854 478999999999999998 9999999999999998
Q ss_pred CCCCccceeEEeeeeeecceeeeeEEEE
Q 026577 207 SESLVSYSLLIRYQVVVPALLLCGYMCT 234 (236)
Q Consensus 207 ~~~l~~~~ll~~~~~~~~~~~~~~~~~~ 234 (236)
+... .+++.+.. .+......|.|.
T Consensus 77 ~~~~---~~~~~~~~-~~~~~~~~f~~~ 100 (156)
T 3gg6_A 77 CEPE---TLLSVEER-GPSWVRFVFLAR 100 (156)
T ss_dssp EEEE---EEEEEEES-STTEEEEEEEEE
T ss_pred eEee---eEEEEEcC-CCCEEEEEEEEE
Confidence 7643 34554432 223344456554
No 20
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.41 E-value=1.7e-13 Score=112.17 Aligned_cols=63 Identities=19% Similarity=0.196 Sum_probs=54.8
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
++.+|++++++.+|++||+||+.. ..++|.|.||||++|++|+ +.+||+||+.||||
T Consensus 40 ~~~~v~v~i~~~~~~vLL~~r~~~-~~~~~~w~~PgG~ve~gEs----------------------~~~aa~REl~EEtG 96 (182)
T 2yvp_A 40 PVAASFVLPVTERGTALLVRQYRH-PTGKFLLEVPAGKVDEGET----------------------PEAAARRELREEVG 96 (182)
T ss_dssp SCEEEEEEEBCTTSEEEEEEEEEG-GGTEEEEECCEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred cCCEEEEEEEcCCCEEEEEEeccC-CCCCcEEEeccccCCCCcC----------------------HHHHHHHHHHHHhC
Confidence 455777888888999999998854 4678999999999999998 99999999999999
Q ss_pred CCCCCC
Q 026577 205 VPSESL 210 (236)
Q Consensus 205 l~~~~l 210 (236)
+.+..+
T Consensus 97 l~~~~~ 102 (182)
T 2yvp_A 97 AEAETL 102 (182)
T ss_dssp EECSCE
T ss_pred CCcccE
Confidence 987643
No 21
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.41 E-value=1.4e-12 Score=106.83 Aligned_cols=84 Identities=15% Similarity=0.144 Sum_probs=62.4
Q ss_pred CCceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhh
Q 026577 124 ASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (236)
Q Consensus 124 ~~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (236)
..+..++++++..+|++||+||... .++|.|.||||++|++|+ +.+||+||+.|||
T Consensus 22 ~~~~~~~~~vi~~~~~vLL~~r~~~--~~~g~W~lPgG~ve~gEs----------------------~~~aa~REl~EEt 77 (176)
T 3q93_A 22 GASRLYTLVLVLQPQRVLLGMKKRG--FGAGRWNGFGGKVQEGET----------------------IEDGARRELQEES 77 (176)
T ss_dssp -CEEEEEEEEEECSSEEEEEEECSS--TTTTSEECEEEECCTTSC----------------------HHHHHHHHHHHHH
T ss_pred CCCcEEEEEEEEeCCEEEEEEEcCC--CCCCeEECceecCCCCCC----------------------HHHHHHHHHHHHH
Confidence 3444555566678899999999643 578999999999999998 9999999999999
Q ss_pred CCCCCCCccceeEEeeeeeecc----eeeeeEEEE
Q 026577 204 GVPSESLVSYSLLIRYQVVVPA----LLLCGYMCT 234 (236)
Q Consensus 204 Gl~~~~l~~~~ll~~~~~~~~~----~~~~~~~~~ 234 (236)
|+.+..+ .+++.+...++. .....|.|.
T Consensus 78 Gl~~~~~---~~l~~~~~~~~~~~~~~~~~~f~~~ 109 (176)
T 3q93_A 78 GLTVDAL---HKVGQIVFEFVGEPELMDVHVFCTD 109 (176)
T ss_dssp SCEESCC---EEEEEEEEEETTCSCEEEEEEEEES
T ss_pred CCcceee---EEEEEEEEEcCCCCcEEEEEEEEEE
Confidence 9998744 345555444432 344556653
No 22
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.40 E-value=7.1e-13 Score=102.14 Aligned_cols=67 Identities=28% Similarity=0.434 Sum_probs=53.3
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
..++++++.+ ||++||+||+. |.|.||||++|++|+ +.+||+||+.||||+
T Consensus 4 ~~~~~~vi~~-~~~vLl~~r~~------~~w~~PgG~ve~gE~----------------------~~~aa~RE~~EE~Gl 54 (134)
T 2pbt_A 4 EFSAGGVLFK-DGEVLLIKTPS------NVWSFPKGNIEPGEK----------------------PEETAVREVWEETGV 54 (134)
T ss_dssp EEEEEEEEEE-TTEEEEEECTT------SCEECCEEECCTTCC----------------------HHHHHHHHHHHHHSE
T ss_pred ceEEEEEEEE-CCEEEEEEeCC------CcEECCccccCCCCC----------------------HHHHHHHHHHHHHCC
Confidence 3467777776 78999999874 999999999999998 999999999999999
Q ss_pred CCCCCccceeEEeeeeeec
Q 026577 206 PSESLVSYSLLIRYQVVVP 224 (236)
Q Consensus 206 ~~~~l~~~~ll~~~~~~~~ 224 (236)
.+..+ .+++.+...++
T Consensus 55 ~~~~~---~~~~~~~~~~~ 70 (134)
T 2pbt_A 55 KGEIL---DYIGEIHYWYT 70 (134)
T ss_dssp EEEEE---EEEEEEEEEEE
T ss_pred ccEEe---eeeeEEEEEee
Confidence 88644 34444443333
No 23
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.40 E-value=6.7e-13 Score=107.23 Aligned_cols=63 Identities=22% Similarity=0.300 Sum_probs=56.0
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEE-eccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFV-FPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~-fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
..++++++++.+|++||.||+.....++|+|. ||||++|++|+ +.+||+||+.||||
T Consensus 34 ~~~v~v~i~~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs----------------------~~~aa~REl~EEtG 91 (171)
T 1q27_A 34 VRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGET----------------------YEEAFRREAREELN 91 (171)
T ss_dssp CEEEEEEEEETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSC----------------------HHHHHHHHHHHHHS
T ss_pred ceEEEEEEECCCCeEEEEEecCCCCCCCCccccccCccccCCCC----------------------HHHHHHHHHHHHHC
Confidence 55777788888999999999866667899998 99999999998 99999999999999
Q ss_pred CCCCCC
Q 026577 205 VPSESL 210 (236)
Q Consensus 205 l~~~~l 210 (236)
+.+...
T Consensus 92 l~~~~~ 97 (171)
T 1q27_A 92 VEIDAL 97 (171)
T ss_dssp CTTSSS
T ss_pred Cccccc
Confidence 998754
No 24
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.40 E-value=2.7e-13 Score=103.70 Aligned_cols=78 Identities=19% Similarity=0.473 Sum_probs=58.0
Q ss_pred EEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCCCC
Q 026577 131 AVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESL 210 (236)
Q Consensus 131 ~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~l 210 (236)
+++++.+|++||.||+.. +.++|+|.||||++|++|+ +.++|+||+.||||+.+..+
T Consensus 9 ~ii~~~~~~vLl~~r~~~-~~~~g~w~~PgG~~e~gE~----------------------~~~aa~RE~~EE~G~~~~~~ 65 (129)
T 1mut_A 9 GIIRNENNEIFITRRAAD-AHMANKLEFPGGKIEMGET----------------------PEQAVVRELQEEVGITPQHF 65 (129)
T ss_dssp EECEETTTEEEEEECSSC-CSSSCCEECCCCCSSSCSS----------------------TTHHHHHHHHTTTCCSSCEE
T ss_pred EEEEecCCEEEEEEeCCC-CCCCCeEECCccCcCCCCC----------------------HHHHHHHHHHHHhCCccccc
Confidence 345578899999999865 4889999999999999998 78999999999999987643
Q ss_pred ccceeEEeeeeeecc--eeeeeEEEE
Q 026577 211 VSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 211 ~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
. +++.+.+.++. ..+..|.|.
T Consensus 66 ~---~~~~~~~~~~~~~~~~~~~~~~ 88 (129)
T 1mut_A 66 S---LFEKLEYEFPDRHITLWFWLVE 88 (129)
T ss_dssp C---CCCCCBCCCSSCEEECCCEEEE
T ss_pred e---EEEEEEEecCCceEEEEEEEEE
Confidence 2 23333333333 334455554
No 25
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.39 E-value=1.2e-12 Score=103.18 Aligned_cols=70 Identities=29% Similarity=0.393 Sum_probs=54.1
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
++|.+++ ..+|++||+||+.. +. +|.|.||||++|++|+ +.+||+||+.||||+.
T Consensus 9 ~~v~~ii-~~~~~vLl~~r~~~-~~-~~~w~lPgG~ve~gE~----------------------~~~aa~RE~~EEtGl~ 63 (153)
T 2b0v_A 9 VTVAAVI-EQDDKYLLVEEIPR-GT-AIKLNQPAGHLEPGES----------------------IIQACSREVLEETGHS 63 (153)
T ss_dssp EEEEEEC-EETTEEEEEEECSS-SS-CCEEECSEEECCTTSC----------------------HHHHHHHHHHHHHSEE
T ss_pred EEEEEEE-eeCCEEEEEEEcCC-CC-CCeEECCCcCcCCCCC----------------------HHHHHHHHHHHhhCcE
Confidence 3454444 47899999999865 34 8999999999999998 9999999999999998
Q ss_pred CCCCccceeEEeeeeeec
Q 026577 207 SESLVSYSLLIRYQVVVP 224 (236)
Q Consensus 207 ~~~l~~~~ll~~~~~~~~ 224 (236)
+... .+++.+....+
T Consensus 64 ~~~~---~~~~~~~~~~~ 78 (153)
T 2b0v_A 64 FLPE---VLTGIYHWTCA 78 (153)
T ss_dssp EEEE---EEEEEEEEEET
T ss_pred eccc---eEEEEEEEeCC
Confidence 7632 34555444444
No 26
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.39 E-value=4.5e-13 Score=106.03 Aligned_cols=63 Identities=16% Similarity=0.136 Sum_probs=52.7
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
++-+|++++++.+|++||+++.+. ...++.|.||||++|++|+ +.+||+||+.||||
T Consensus 4 ~~~~v~vi~~~~~~~vLLv~~~r~-~~~~~~w~~PgG~ve~gEt----------------------~~~aa~REl~EEtG 60 (145)
T 2w4e_A 4 GPRAVFILPVTAQGEAVLIRQFRY-PLRATITEIVAGGVEKGED----------------------LGAAAARELLEEVG 60 (145)
T ss_dssp CCEEEEEEEEETTSEEEEEEEEET-TTTEEEEECEEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred eCCEEEEEEEcCCCEEEEEEEEec-CCCCCEEEeCCccCCCCCC----------------------HHHHHHHHHHHhhC
Confidence 456788888889999988876533 2356799999999999998 99999999999999
Q ss_pred CCCCCC
Q 026577 205 VPSESL 210 (236)
Q Consensus 205 l~~~~l 210 (236)
+.+..+
T Consensus 61 l~~~~~ 66 (145)
T 2w4e_A 61 GAASEW 66 (145)
T ss_dssp EECSEE
T ss_pred CccCeE
Confidence 987643
No 27
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.39 E-value=1.4e-12 Score=107.90 Aligned_cols=83 Identities=22% Similarity=0.329 Sum_probs=57.9
Q ss_pred eEEEEEEEeCCC--eEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 127 LGNGAVVETSDK--KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 127 lgv~~vl~t~dg--~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
.++++++++.+| +|||+||+.....++|.|.||||++|++|+ +.+||+||+.||||
T Consensus 35 ~~~~~v~i~~~~~~~vLL~~r~~~~~~~~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 92 (194)
T 1nqz_A 35 RAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGET----------------------PTQAALREAQEEVA 92 (194)
T ss_dssp EEEEEEEEESSSSCBBCEEEEC------CCCEECSEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred eEEEEEEEecCCCeEEEEEEecCCCCCCCCeEECCcccCCCCCC----------------------HHHHHHHHHHHHHC
Confidence 445555567788 999999986555789999999999999998 99999999999999
Q ss_pred CCCCCCccceeEEeeeeeec--ceeeeeEEEE
Q 026577 205 VPSESLVSYSLLIRYQVVVP--ALLLCGYMCT 234 (236)
Q Consensus 205 l~~~~l~~~~ll~~~~~~~~--~~~~~~~~~~ 234 (236)
+.+..+ .+++.+..... .....-|.|.
T Consensus 93 l~~~~~---~~l~~~~~~~~~~~~~~~~f~~~ 121 (194)
T 1nqz_A 93 LDPAAV---TLLGELDDVFTPVGFHVTPVLGR 121 (194)
T ss_dssp CCGGGC---EEEEECCCEEETTTEEEEEEEEE
T ss_pred CCccce---EEEEEccCccCCCCeEEEEEEEE
Confidence 988754 34444333322 2344556654
No 28
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.37 E-value=1.5e-12 Score=104.80 Aligned_cols=81 Identities=22% Similarity=0.288 Sum_probs=60.5
Q ss_pred eEEEEEEEeCC-CeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 127 LGNGAVVETSD-KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 127 lgv~~vl~t~d-g~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
+.+.+++.+.+ |+|||+||+. ..++|.|.||||++|++|+ +.+||+||+.||||+
T Consensus 11 ~~v~~vi~~~~~~~vLL~~r~~--~~~~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 66 (161)
T 3exq_A 11 LVTMVMVTDPETQRVLVEDKVN--VPWKAGHSFPGGHVEVGEP----------------------CATAAIREVFEETGL 66 (161)
T ss_dssp EEEEEEEBCTTTCCEEEECCCC--CTTTCSBBCCCCBCCTTSC----------------------HHHHHHHHHHHHHCC
T ss_pred EEEEEEEEeCCCCEEEEEEccC--CCCCCCEEccceecCCCCC----------------------HHHHHHHHHHHhhCc
Confidence 45566666555 6999999883 4788899999999999998 999999999999999
Q ss_pred CCCCCccceeEEeeeeeec----ceeeeeEEEE
Q 026577 206 PSESLVSYSLLIRYQVVVP----ALLLCGYMCT 234 (236)
Q Consensus 206 ~~~~l~~~~ll~~~~~~~~----~~~~~~~~~~ 234 (236)
.+..+ .++..+....+ ......|.|.
T Consensus 67 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (161)
T 3exq_A 67 RLSGV---TFCGTCEWFDDDRQHRKLGLLYRAS 96 (161)
T ss_dssp EESCC---EEEEEEEEECSSCSSEEEEEEEEEC
T ss_pred EecCC---cEEEEEecccCCCCeEEEEEEEEEe
Confidence 88744 34555554442 2445555553
No 29
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.36 E-value=3.8e-12 Score=105.30 Aligned_cols=81 Identities=21% Similarity=0.334 Sum_probs=59.6
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
+.|++++.+ +|+|||+||... ..+|+|.||||++|++|+ +.++|+||+.||||+.
T Consensus 41 ~~v~~ii~~-~~~vLL~~r~~~--~~~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl~ 95 (189)
T 3cng_A 41 VIVGCIPEW-ENKVLLCKRAIA--PYRGKWTLPAGFMENNET----------------------LVQGAARETLEEANAR 95 (189)
T ss_dssp EEEEEEEEE-TTEEEEEEESSS--SSTTCEECSEEECCTTCC----------------------HHHHHHHHHHHHHCCC
T ss_pred eEEEEEEEe-CCEEEEEEccCC--CCCCeEECceeeccCCCC----------------------HHHHHHHHHHHHHCCc
Confidence 455556654 899999999865 348999999999999998 9999999999999998
Q ss_pred CCCCccceeEEeeeeeecceeeeeEEEEe
Q 026577 207 SESLVSYSLLIRYQVVVPALLLCGYMCTS 235 (236)
Q Consensus 207 ~~~l~~~~ll~~~~~~~~~~~~~~~~~~~ 235 (236)
+... .++.++...........|.|..
T Consensus 96 ~~~~---~~~~~~~~~~~~~~~~~f~~~~ 121 (189)
T 3cng_A 96 VEIR---ELYAVYSLPHISQVYMLFRAKL 121 (189)
T ss_dssp EEEE---EEEEEEEEGGGTEEEEEEEEEE
T ss_pred cccc---eeEEEEecCCCcEEEEEEEEEe
Confidence 7632 3444443322234555666653
No 30
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.36 E-value=1.3e-12 Score=109.90 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=53.8
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCC-CCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhh
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPE-PQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~E-p~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (236)
++-+|++++++.+|++||+||... ...+|.|.||||++| ++|+ +.+||+||+.|||
T Consensus 42 ~~~av~v~i~~~~~~vLLvrr~r~-~~~~~~w~lPgG~ve~~gEs----------------------~~~aa~REl~EEt 98 (207)
T 1mk1_A 42 HFGAVAIVAMDDNGNIPMVYQYRH-TYGRRLWELPAGLLDVAGEP----------------------PHLTAARELREEV 98 (207)
T ss_dssp ECCEEEEEECCTTSEEEEEEEEET-TTTEEEEECCEEECCSTTCC----------------------HHHHHHHHHHHHH
T ss_pred CCCEEEEEEEcCCCEEEEEEeecC-CCCCcEEEeCCccccCCCCC----------------------HHHHHHHHHHHHH
Confidence 344777777888999999998854 367899999999999 9998 9999999999999
Q ss_pred CCCCCCC
Q 026577 204 GVPSESL 210 (236)
Q Consensus 204 Gl~~~~l 210 (236)
|+.+..+
T Consensus 99 Gl~~~~~ 105 (207)
T 1mk1_A 99 GLQASTW 105 (207)
T ss_dssp CEEEEEE
T ss_pred CCccccc
Confidence 9987643
No 31
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.36 E-value=4.3e-12 Score=98.95 Aligned_cols=80 Identities=20% Similarity=0.325 Sum_probs=58.1
Q ss_pred ceEEEEEEEe--CCCe--EEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHH
Q 026577 126 PLGNGAVVET--SDKK--ILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (236)
Q Consensus 126 ~lgv~~vl~t--~dg~--vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (236)
.++|++++.. .+|+ +||+||+.. ++.|.||||++|++|+ +.+||+||+.|
T Consensus 9 ~~~v~~vi~~~~~~~~~~vLl~~r~~~----~~~w~~PgG~ve~gE~----------------------~~~aa~RE~~E 62 (139)
T 2yyh_A 9 LLATDVIIRLWDGENFKGIVLIERKYP----PVGLALPGGFVEVGER----------------------VEEAAAREMRE 62 (139)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECSS----SCSEECCEEECCTTCC----------------------HHHHHHHHHHH
T ss_pred eEEEEEEEEEEcCCCcEEEEEEEecCC----CCcEECccccCCCCCC----------------------HHHHHHHHHHH
Confidence 3566777765 6788 999999854 3459999999999998 99999999999
Q ss_pred hhCCCCCCCccceeEEeeeeee----cceeeeeEEEE
Q 026577 202 EIGVPSESLVSYSLLIRYQVVV----PALLLCGYMCT 234 (236)
Q Consensus 202 EtGl~~~~l~~~~ll~~~~~~~----~~~~~~~~~~~ 234 (236)
|||+.+... .++..+.... .......|.|+
T Consensus 63 EtGl~~~~~---~~~~~~~~~~~~~~~~~~~~~f~~~ 96 (139)
T 2yyh_A 63 ETGLEVRLH---KLMGVYSDPERDPRAHVVSVVWIGD 96 (139)
T ss_dssp HHCCCCEEE---EEEEEECCTTSCTTSCEEEEEEEEE
T ss_pred HHCCCcccc---eEEEEECCCCcCCCceEEEEEEEEe
Confidence 999987633 3445444321 12345556664
No 32
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.35 E-value=1.5e-12 Score=102.73 Aligned_cols=58 Identities=19% Similarity=0.340 Sum_probs=49.1
Q ss_pred CceEEEEEEE---eCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHH
Q 026577 125 SPLGNGAVVE---TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (236)
Q Consensus 125 ~~lgv~~vl~---t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (236)
++.+|.+++. +.+++|||+||+.. |.|.||||++|++|+ +.+||+||+.|
T Consensus 4 ~~~~v~vvi~~~~~~~~~vLl~~r~~~-----g~w~~PgG~ve~gE~----------------------~~~aa~REl~E 56 (149)
T 3son_A 4 QPFQVLVIPFIKTEANYQFGVLHRTDA-----DVWQFVAGGGEDEEA----------------------ISETAKRESIE 56 (149)
T ss_dssp CCCEEEEEEEEECSSSEEEEEEEESSS-----SCEECEEEECCTTCC----------------------HHHHHHHHHHH
T ss_pred CceEEEEEEEEecCCCeEEEEEEEcCC-----CCEeCCccccCCCCC----------------------HHHHHHHHHHH
Confidence 4556655554 45679999999853 999999999999998 99999999999
Q ss_pred hhCCCCCC
Q 026577 202 EIGVPSES 209 (236)
Q Consensus 202 EtGl~~~~ 209 (236)
|||+.+..
T Consensus 57 EtGl~~~~ 64 (149)
T 3son_A 57 ELNLDVDV 64 (149)
T ss_dssp HHTCCSCC
T ss_pred HhCCCccc
Confidence 99999875
No 33
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.35 E-value=1.4e-12 Score=104.35 Aligned_cols=59 Identities=20% Similarity=0.232 Sum_probs=50.7
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
..+.+++++.+ +|+|||+||+. +|.|.||||++|++|+ +.+||+||++||||
T Consensus 5 ~~~~v~~vi~~-~~~vLL~~r~~-----~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 56 (159)
T 3f6a_A 5 RHFTVSVFIVC-KDKVLLHLHKK-----AKKMLPLGGHIEVNEL----------------------PEEACIREAKEEAG 56 (159)
T ss_dssp SCEEEEEEEEE-TTEEEEEECSS-----SCCEECEEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred ceEEEEEEEEE-CCEEEEEEcCC-----CCeEECCccCccCCCC----------------------HHHHHHHHHHHHhC
Confidence 45567777776 78999999874 4899999999999998 99999999999999
Q ss_pred CCCCCCc
Q 026577 205 VPSESLV 211 (236)
Q Consensus 205 l~~~~l~ 211 (236)
+.+..+.
T Consensus 57 l~~~~~~ 63 (159)
T 3f6a_A 57 LNVTLYN 63 (159)
T ss_dssp CCCEECC
T ss_pred CCceecc
Confidence 9887543
No 34
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.34 E-value=1.2e-12 Score=104.20 Aligned_cols=57 Identities=28% Similarity=0.408 Sum_probs=50.2
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
..+|++++++.+|+|||+||+. .+|+|.||||++|++|+ +.+||+||+.||||+
T Consensus 14 ~~~v~~~i~~~~~~vLl~~r~~----~~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEtGl 67 (165)
T 1f3y_A 14 RRNVGICLMNNDKKIFAASRLD----IPDAWQMPQGGIDEGED----------------------PRNAAIRELREETGV 67 (165)
T ss_dssp CCEEEEEEECTTSCEEEEEETT----EEEEEECCEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred eeeEEEEEECCCCcEEEEecCC----CCCcEECCeeccCCCCC----------------------HHHHHHHHHHHhhCC
Confidence 3466778888899999999983 36999999999999998 999999999999999
Q ss_pred CCC
Q 026577 206 PSE 208 (236)
Q Consensus 206 ~~~ 208 (236)
.+.
T Consensus 68 ~~~ 70 (165)
T 1f3y_A 68 TSA 70 (165)
T ss_dssp CSE
T ss_pred Chh
Confidence 875
No 35
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.34 E-value=9.6e-13 Score=104.87 Aligned_cols=57 Identities=23% Similarity=0.306 Sum_probs=47.5
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
..++++++++.+|+|||+||+ +|.|.||||++|++|+ +.+||+||+.||||+
T Consensus 21 ~~~v~~ii~~~~~~vLL~~r~------~~~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 72 (153)
T 3eds_A 21 XPSVAAVIKNEQGEILFQYPG------GEYWSLPAGAIELGET----------------------PEEAVVREVWEETGL 72 (153)
T ss_dssp EEEEEEEEBCTTCCEEEECC---------CBBCSEEECCTTSC----------------------HHHHHHHHHHHHHCE
T ss_pred eeeEEEEEEcCCCeEEEEEcC------CCcEECCccccCCCCC----------------------HHHHHHHHHHHHHCc
Confidence 346677777788999998887 5999999999999998 999999999999999
Q ss_pred CCCCC
Q 026577 206 PSESL 210 (236)
Q Consensus 206 ~~~~l 210 (236)
.+..+
T Consensus 73 ~~~~~ 77 (153)
T 3eds_A 73 KVQVK 77 (153)
T ss_dssp EEEEE
T ss_pred cceee
Confidence 87643
No 36
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.34 E-value=5.9e-12 Score=100.47 Aligned_cols=50 Identities=34% Similarity=0.533 Sum_probs=43.7
Q ss_pred eCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCCCC
Q 026577 135 TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESL 210 (236)
Q Consensus 135 t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~l 210 (236)
+.++++||+||+.. +|.|.||||++|++|+ +.+||+||++||||+.....
T Consensus 21 n~~~e~LL~~r~~~----~~~W~lPgG~ve~gEt----------------------~~~aa~REl~EEtGl~~~~~ 70 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWTPPKGHVEPGED----------------------DLETALRETQEEAGIEAGQL 70 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEECSEEECCSSCC----------------------HHHHHHHHHHHHHCCCGGGE
T ss_pred CCCcEEEEEEecCC----CCCEECCeeeccCCCC----------------------HHHHHHHHHHHHHCCccccc
Confidence 34568999999854 5899999999999999 99999999999999988754
No 37
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.34 E-value=3.4e-12 Score=103.05 Aligned_cols=80 Identities=21% Similarity=0.349 Sum_probs=58.3
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
...+|++++. .||++||+||... +|.|.||||++|++|+ +.+||+||+.||||
T Consensus 22 ~~~~v~~ii~-~~~~vLL~~r~~~----~~~w~~PgG~ve~gEs----------------------~~~aa~REl~EEtG 74 (171)
T 3id9_A 22 MQVRVTGILI-EDEKVLLVKQKVA----NRDWSLPGGRVENGET----------------------LEEAMIREMREETG 74 (171)
T ss_dssp CEEEEEEEEE-ETTEEEEEECSST----TCCEECCEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred eEEEEEEEEE-ECCEEEEEEEECC----CCeEECCCccCCCCCC----------------------HHHHHHHHHHHHHC
Confidence 4456766666 4799999999853 7999999999999998 99999999999999
Q ss_pred CCCCCCccceeEEeeeeeec--ceeeeeEEEE
Q 026577 205 VPSESLVSYSLLIRYQVVVP--ALLLCGYMCT 234 (236)
Q Consensus 205 l~~~~l~~~~ll~~~~~~~~--~~~~~~~~~~ 234 (236)
+.+... .++..+..... ......|.|.
T Consensus 75 l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 103 (171)
T 3id9_A 75 LEVKIK---KLLYVCDKPDASPSLLHITFLLE 103 (171)
T ss_dssp CCEEEE---EEEEEEEETTSSSCEEEEEEEEE
T ss_pred Cccccc---eEEEEEcccCCCCcEEEEEEEEE
Confidence 997532 34444443322 2334445443
No 38
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.33 E-value=3e-12 Score=107.20 Aligned_cols=62 Identities=21% Similarity=0.356 Sum_probs=51.3
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
++-+|++++++.+ ++||+||.+. +..+|.|.||||++|++|+ +.+||+||+.||||
T Consensus 48 ~~~av~vl~~~~~-~vLLvrq~r~-~~~~~~welPgG~ve~gEs----------------------~~~aA~REl~EEtG 103 (198)
T 1vhz_A 48 NREAVMIVPIVDD-HLILIREYAV-GTESYELGFSKGLIDPGES----------------------VYEAANRELKEEVG 103 (198)
T ss_dssp CCCEEEEEEEETT-EEEEEEEEET-TTTEEEEECEEEECCTTCC----------------------HHHHHHHHHHHHHS
T ss_pred CCCEEEEEEEECC-EEEEEEcccC-CCCCcEEEeCcccCCCCcC----------------------HHHHHHHHHHHHHC
Confidence 3446666667666 9999988744 4668999999999999998 99999999999999
Q ss_pred CCCCCC
Q 026577 205 VPSESL 210 (236)
Q Consensus 205 l~~~~l 210 (236)
+.+..+
T Consensus 104 l~~~~~ 109 (198)
T 1vhz_A 104 FGANDL 109 (198)
T ss_dssp EEEEEE
T ss_pred CCcCce
Confidence 987643
No 39
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.32 E-value=5.5e-12 Score=102.57 Aligned_cols=76 Identities=20% Similarity=0.368 Sum_probs=55.1
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV 205 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl 205 (236)
.+.++++++..+|++||++|+ +|.|.||||++|++|+ +.+||+||+.||||+
T Consensus 15 ~~~~~~~ii~~~~~vLL~~r~------~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl 66 (163)
T 3f13_A 15 LARRATAIIEMPDGVLVTASR------GGRYNLPGGKANRGEL----------------------RSQALIREIREETGL 66 (163)
T ss_dssp CEEEEEEECEETTEEEEEECC---------BBCSEEECCTTCC----------------------HHHHHHHHHHHHHCC
T ss_pred ceEEEEEEEEeCCEEEEEEEC------CCeEECCceeCCCCCC----------------------HHHHHHHHHHHHHCc
Confidence 345556666678999999986 4899999999999999 999999999999999
Q ss_pred CCCCCccceeEEeeeeeecceeeeeEEEE
Q 026577 206 PSESLVSYSLLIRYQVVVPALLLCGYMCT 234 (236)
Q Consensus 206 ~~~~l~~~~ll~~~~~~~~~~~~~~~~~~ 234 (236)
.+..+. ++..+ ..+......|.|.
T Consensus 67 ~~~~~~---~l~~~--~~~~~~~~~f~~~ 90 (163)
T 3f13_A 67 RINSML---YLFDH--ITPFNAHKVYLCI 90 (163)
T ss_dssp CCCEEE---EEEEE--ECSSEEEEEEEEE
T ss_pred ccceeE---EEEEE--ecCCeEEEEEEEE
Confidence 987542 33333 2334555556664
No 40
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.31 E-value=4.8e-12 Score=108.26 Aligned_cols=83 Identities=18% Similarity=0.310 Sum_probs=62.2
Q ss_pred ceEEEEEEE---eCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHh
Q 026577 126 PLGNGAVVE---TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEE 202 (236)
Q Consensus 126 ~lgv~~vl~---t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EE 202 (236)
.++|+++++ +.+++|||++|... .++|.|.+|||++|++|+ +.+||+||+.||
T Consensus 13 ~v~v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~lPGG~ve~gEs----------------------~~~Aa~REl~EE 68 (226)
T 2fb1_A 13 YLGIDCIIFGFNEGEISLLLLKRNFE--PAMGEWSLMGGFVQKDES----------------------VDDAAKRVLAEL 68 (226)
T ss_dssp EEEEEEEEEEEETTEEEEEEEECSSS--SSTTCEECEEEECCTTSC----------------------HHHHHHHHHHHH
T ss_pred eEEEEEEEEEEeCCCCEEEEEECcCC--CCCCCEECCeeccCCCCC----------------------HHHHHHHHHHHH
Confidence 367777777 44689999999864 568999999999999999 999999999999
Q ss_pred hCCCCCCCccceeEEeeeeee--c--ceeeeeEEEEe
Q 026577 203 IGVPSESLVSYSLLIRYQVVV--P--ALLLCGYMCTS 235 (236)
Q Consensus 203 tGl~~~~l~~~~ll~~~~~~~--~--~~~~~~~~~~~ 235 (236)
||+....+ ..++.+.... | ..+...|+|..
T Consensus 69 tGl~~~~~---~~l~~~~~~~r~~~~~~v~~~y~a~~ 102 (226)
T 2fb1_A 69 TGLENVYM---EQVGAFGAIDRDPGERVVSIAYYALI 102 (226)
T ss_dssp HCCCSCEE---EEEEEECCTTSSSSSCEEEEEEEEEC
T ss_pred HCCCCCce---EEEEEeCCCCcCCCceEEEEEEEEEe
Confidence 99998744 2344443221 2 23455677754
No 41
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.31 E-value=6.9e-12 Score=99.40 Aligned_cols=53 Identities=26% Similarity=0.486 Sum_probs=46.1
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
+.+++++. .+|++||+|| +|.|.||||++|++|+ +.+||+||+.||||+.
T Consensus 20 ~~~~~ii~-~~~~vLl~~r-------~~~w~lPgG~ve~gE~----------------------~~~aa~REl~EEtGl~ 69 (154)
T 2pqv_A 20 VRATALIV-QNHKLLVTKD-------KGKYYTIGGAIQVNES----------------------TEDAVVREVKEELGVK 69 (154)
T ss_dssp EEEEECCE-ETTEEEEEEE-------TTEEECEEEECBTTCC----------------------HHHHHHHHHHHHHCCC
T ss_pred EEEEEEEE-ECCEEEEEec-------CCeEECcccCcCCCCC----------------------HHHHHHHHHHHHhCCe
Confidence 35566666 4789999999 5899999999999999 9999999999999998
Q ss_pred CCC
Q 026577 207 SES 209 (236)
Q Consensus 207 ~~~ 209 (236)
+..
T Consensus 70 ~~~ 72 (154)
T 2pqv_A 70 AQA 72 (154)
T ss_dssp EEE
T ss_pred eee
Confidence 763
No 42
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.30 E-value=3.9e-12 Score=103.01 Aligned_cols=60 Identities=17% Similarity=0.299 Sum_probs=51.0
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
++.+|++++++ +|++||+||.+. +.++|.|.||||++|++|+ +.+||+||+.||||
T Consensus 33 ~~~~v~vii~~-~~~vLL~~~~r~-~~~~~~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 88 (170)
T 1v8y_A 33 HKPAVAVIALR-EGRMLFVRQMRP-AVGLAPLEIPAGLIEPGED----------------------PLEAARRELAEQTG 88 (170)
T ss_dssp ECCEEEEEEEE-TTEEEEEECCBT-TTTBCCBBCSEEECCTTCC----------------------HHHHHHHHHHHHHS
T ss_pred cCCeEEEEEEE-CCEEEEEEEEeC-CCCCCEEECCccccCCCCC----------------------HHHHHHHHHHHHHC
Confidence 34467777787 999999998744 3678999999999999998 99999999999999
Q ss_pred CCCCC
Q 026577 205 VPSES 209 (236)
Q Consensus 205 l~~~~ 209 (236)
+ +..
T Consensus 89 l-~~~ 92 (170)
T 1v8y_A 89 L-SGD 92 (170)
T ss_dssp E-EEE
T ss_pred C-CcC
Confidence 9 553
No 43
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.30 E-value=1e-11 Score=103.26 Aligned_cols=55 Identities=22% Similarity=0.449 Sum_probs=48.3
Q ss_pred CceEEEEEEEeCCC-eEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhh
Q 026577 125 SPLGNGAVVETSDK-KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (236)
Q Consensus 125 ~~lgv~~vl~t~dg-~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (236)
..+++++++++.++ +|||+||.. +|.|.||||++|++|+ +.+||+||+.|||
T Consensus 44 ~h~~~~~vv~~~~~~~vLL~~r~~-----~g~w~lPgG~ve~gEs----------------------~~eaa~REl~EEt 96 (197)
T 3fcm_A 44 AHLTSSAFAVNKERNKFLMIHHNI-----YNSWAWTGGHSDNEKD----------------------QLKVAIKELKEET 96 (197)
T ss_dssp EEEEEEEEEECTTSCEEEEEEETT-----TTEEECEEEECTTCCB----------------------HHHHHHHHHHHHH
T ss_pred ccEEEEEEEEECCCCEEEEEEecC-----CCCEECCccccCCCCC----------------------HHHHHHHHHHHHH
Confidence 34577788888776 999999873 4899999999999998 9999999999999
Q ss_pred CCC
Q 026577 204 GVP 206 (236)
Q Consensus 204 Gl~ 206 (236)
|+.
T Consensus 97 Gl~ 99 (197)
T 3fcm_A 97 GVK 99 (197)
T ss_dssp CCS
T ss_pred CCC
Confidence 998
No 44
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.30 E-value=9.6e-12 Score=102.44 Aligned_cols=70 Identities=21% Similarity=0.302 Sum_probs=54.0
Q ss_pred eEEEEEEEe---C----CCeEEEEEEcC-----CCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHH
Q 026577 127 LGNGAVVET---S----DKKILLLQRSN-----NVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDS 194 (236)
Q Consensus 127 lgv~~vl~t---~----dg~vLl~rRs~-----~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~a 194 (236)
++|.++++. . +++|||+||+. ....++|.|.||||++|++|+ +.+|
T Consensus 28 ~~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~lPGG~ve~gEs----------------------~~~a 85 (187)
T 3i9x_A 28 YTSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENES----------------------AEQA 85 (187)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEECSEEECCTTSC----------------------HHHH
T ss_pred ceEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEECCceeCCCCCC----------------------HHHH
Confidence 456555553 2 46899999964 234678999999999999998 9999
Q ss_pred HHHHHHHhhCCCCCCCccceeEEeeee
Q 026577 195 ITREVVEEIGVPSESLVSYSLLIRYQV 221 (236)
Q Consensus 195 a~REl~EEtGl~~~~l~~~~ll~~~~~ 221 (236)
|+||++||||+.+..+ .+++.+..
T Consensus 86 a~REl~EEtGl~~~~~---~~l~~~~~ 109 (187)
T 3i9x_A 86 AERELEEETSLTDIPL---IPFGVFDK 109 (187)
T ss_dssp HHHHHHHHHCCCSCCC---EEEEEECC
T ss_pred HHHHHHHHHCCCCcce---EEEEEEcC
Confidence 9999999999987654 34555443
No 45
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.30 E-value=7.1e-12 Score=103.89 Aligned_cols=75 Identities=27% Similarity=0.501 Sum_probs=55.7
Q ss_pred EEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCC
Q 026577 129 NGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSE 208 (236)
Q Consensus 129 v~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~ 208 (236)
+++++. .+|+|||+||.. +|+|.||||++|++|+ +.+||+||+.||||+.+.
T Consensus 7 ~~~vi~-~~~~vLL~~r~~-----~g~W~lPGG~ve~gEs----------------------~~~aa~REl~EEtGl~~~ 58 (188)
T 3fk9_A 7 TNCIVV-DHDQVLLLQKPR-----RGWWVAPGGKMEAGES----------------------ILETVKREYWEETGITVK 58 (188)
T ss_dssp EEEEEE-ETTEEEEEECTT-----TCCEECCEEECCTTCC----------------------HHHHHHHHHHHHHSCEES
T ss_pred EEEEEE-ECCEEEEEEeCC-----CCeEECCeecccCCCC----------------------HHHHHHHHHHHHHCCCCC
Confidence 344444 589999999853 6999999999999998 999999999999999887
Q ss_pred CCccceeEEeeeeeecc-------eeeeeEEEE
Q 026577 209 SLVSYSLLIRYQVVVPA-------LLLCGYMCT 234 (236)
Q Consensus 209 ~l~~~~ll~~~~~~~~~-------~~~~~~~~~ 234 (236)
.. .+++++....+. ..+..|.|.
T Consensus 59 ~~---~~~~~~~~~~~~~~~~~~~~~~~~f~a~ 88 (188)
T 3fk9_A 59 NP---ELKGIFSMVIFDEGKIVSEWMLFTFKAT 88 (188)
T ss_dssp SC---EEEEEEEEEEEETTEEEEEEEEEEEEES
T ss_pred Cc---eEEEEEEEEecCCCcceEEEEEEEEEEE
Confidence 54 345554444322 145566554
No 46
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.30 E-value=5.5e-12 Score=111.09 Aligned_cols=85 Identities=22% Similarity=0.275 Sum_probs=65.6
Q ss_pred cCCceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHh
Q 026577 123 TASPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEE 202 (236)
Q Consensus 123 ~~~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EE 202 (236)
..+...+.+++++.+++|||+||+... +|+|.+|||++|++|+ ++++|+||+.||
T Consensus 136 yp~~~~~viv~v~~~~~vLL~rr~~~~---~g~w~lPgG~vE~GEt----------------------~eeAa~REv~EE 190 (269)
T 1vk6_A 136 YPQIAPCIIVAIRRDDSILLAQHTRHR---NGVHTVLAGFVEVGET----------------------LEQAVAREVMEE 190 (269)
T ss_dssp CCCCEEEEEEEEEETTEEEEEEETTTC---SSCCBCEEEECCTTCC----------------------HHHHHHHHHHHH
T ss_pred cCCCCcEEEEEEEeCCEEEEEEecCCC---CCcEECCcCcCCCCCC----------------------HHHHHHHHHHHH
Confidence 334444444556678999999998542 6999999999999999 999999999999
Q ss_pred hCCCCCCCccceeEEeeeeeecceeeeeEEEEe
Q 026577 203 IGVPSESLVSYSLLIRYQVVVPALLLCGYMCTS 235 (236)
Q Consensus 203 tGl~~~~l~~~~ll~~~~~~~~~~~~~~~~~~~ 235 (236)
||+.+..+ .+++.+...++..++.+|.+..
T Consensus 191 tGl~v~~~---~~~~~~~~~~~~~~~~~f~a~~ 220 (269)
T 1vk6_A 191 SGIKVKNL---RYVTSQPWPFPQSLMTAFMAEY 220 (269)
T ss_dssp HCCEEEEE---EEEEEEEEETTEEEEEEEEEEE
T ss_pred hCceeeeE---EEEEEEecCCCCEEEEEEEEEE
Confidence 99988743 4556555566777778888763
No 47
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.29 E-value=5.7e-12 Score=105.36 Aligned_cols=65 Identities=28% Similarity=0.442 Sum_probs=51.3
Q ss_pred eEEEEEEE--eCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 127 LGNGAVVE--TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 127 lgv~~vl~--t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
..++++++ +.+++|||+||+.. +|.|.||||++|++|+ +.+||+||+.||||
T Consensus 41 ~~~~~vi~~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEt----------------------~~eaa~REl~EEtG 94 (194)
T 2fvv_A 41 KRAACLCFRSESEEEVLLVSSSRH----PDRWIVPGGGMEPEEE----------------------PSVAAVREVCEEAG 94 (194)
T ss_dssp EEEEEEEESSTTCCEEEEEECSSC----TTSEECSEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred ccEEEEEEEECCCCEEEEEEEeCC----CCcEECCCCcCCCCcC----------------------HHHHHHHHHHHHhC
Confidence 44555655 34689999998743 5899999999999998 99999999999999
Q ss_pred CCCCCCccceeEEeee
Q 026577 205 VPSESLVSYSLLIRYQ 220 (236)
Q Consensus 205 l~~~~l~~~~ll~~~~ 220 (236)
+.+..+ .+++.+.
T Consensus 95 l~~~~~---~~l~~~~ 107 (194)
T 2fvv_A 95 VKGTLG---RLVGIFE 107 (194)
T ss_dssp EEEEEE---EEEEEEE
T ss_pred Cccccc---eEEEEEE
Confidence 987643 3455444
No 48
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.29 E-value=1.9e-12 Score=103.45 Aligned_cols=55 Identities=29% Similarity=0.610 Sum_probs=48.0
Q ss_pred EEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 128 GNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 128 gv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
.+++++.+ +|++||+||+. +|.|.||||++|++|+ +.+||+||+.||||+.+
T Consensus 3 ~~~~vi~~-~~~vLL~~r~~-----~g~W~lPgG~ve~gEs----------------------~~~aa~REl~EEtGl~~ 54 (156)
T 1k2e_A 3 VTSGVLVE-NGKVLLVKHKR-----LGVYIYPGGHVEHNET----------------------PIEAVKREFEEETGIVV 54 (156)
T ss_dssp EEEEECEE-TTEEEEEECTT-----TCSEECSEEECCTTCC----------------------HHHHHHHHHHHHHSEEE
T ss_pred EEEEEEEE-CCEEEEEEEcC-----CCcEECCeeecCCCCC----------------------HHHHHHHHHHHHHCCcc
Confidence 56667776 89999999874 5899999999999999 99999999999999987
Q ss_pred CCC
Q 026577 208 ESL 210 (236)
Q Consensus 208 ~~l 210 (236)
...
T Consensus 55 ~~~ 57 (156)
T 1k2e_A 55 EPI 57 (156)
T ss_dssp EEC
T ss_pred eec
Confidence 654
No 49
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.27 E-value=1e-11 Score=98.85 Aligned_cols=81 Identities=26% Similarity=0.360 Sum_probs=57.2
Q ss_pred EEEEEEEeC---CCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHH-HHHHHHHHHhh
Q 026577 128 GNGAVVETS---DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMF-DSITREVVEEI 203 (236)
Q Consensus 128 gv~~vl~t~---dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~-~aa~REl~EEt 203 (236)
.+.+++... +|++||.||... +.++|+|+||||++|++|+ +. ++++||+.|||
T Consensus 21 ~~~~vi~~~~~~~~~vLl~~R~~~-~~~~g~w~~PgG~~e~gE~----------------------~~~~a~~REl~EE~ 77 (155)
T 1x51_A 21 SATCVLEQPGALGAQILLVQRPNS-GLLAGLWEFPSVTWEPSEQ----------------------LQRKALLQELQRWA 77 (155)
T ss_dssp EEEEEEEEECSSSEEEEEEECCCC-STTCSCEECCEEECCSSHH----------------------HHHHHHHHHHHHHS
T ss_pred EEEEEEEecCCCCCEEEEEECCCC-CCCCceecCCccccCCCCC----------------------HHHHHHHHHHHHHh
Confidence 333455543 589999999854 6889999999999999997 85 99999999999
Q ss_pred C-CCCCCCccceeEEeeeeeecc--eeeeeEEEE
Q 026577 204 G-VPSESLVSYSLLIRYQVVVPA--LLLCGYMCT 234 (236)
Q Consensus 204 G-l~~~~l~~~~ll~~~~~~~~~--~~~~~~~~~ 234 (236)
| +.+..+ ..++...+.+++ +.+..|.|+
T Consensus 78 g~l~~~~~---~~l~~~~~~~~~~~~~~~~~~~~ 108 (155)
T 1x51_A 78 GPLPATHL---RHLGEVVHTFSHIKLTYQVYGLA 108 (155)
T ss_dssp CCCCSTTC---EECCCBCCBCSSCEEEEEEEEEE
T ss_pred CCcceeee---eecceEEEecCCccEEEEEEEEE
Confidence 9 776533 223333344443 334456654
No 50
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.27 E-value=1e-11 Score=98.28 Aligned_cols=80 Identities=28% Similarity=0.422 Sum_probs=54.7
Q ss_pred ceEEEEEEEeCCCe----EEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHH
Q 026577 126 PLGNGAVVETSDKK----ILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (236)
Q Consensus 126 ~lgv~~vl~t~dg~----vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (236)
...+++++.+ +++ +|+.+|+... ++| |.||||++|++|+ +.+||+||+.|
T Consensus 8 ~~~~~~ii~~-~~~~~~~vLl~~r~~~~--~~g-w~lPgG~ve~gE~----------------------~~~aa~RE~~E 61 (155)
T 2b06_A 8 ILTNICLIED-LETQRVVMQYRAPENNR--WSG-YAFPGGHVENDEA----------------------FAESVIREIYE 61 (155)
T ss_dssp EEEEEEEEEE-TTTTEEEEEEEC-------CCE-EECCCCBCCTTSC----------------------HHHHHHHHHHH
T ss_pred EEEEEEEEEE-CCCCeEEEEEEECCCCC--CCC-EeccceecCCCCC----------------------HHHHHHHHHHH
Confidence 3456666664 666 8888888552 788 9999999999998 99999999999
Q ss_pred hhCCCCCCCccceeEEeeeeeec---ceeeeeEEEE
Q 026577 202 EIGVPSESLVSYSLLIRYQVVVP---ALLLCGYMCT 234 (236)
Q Consensus 202 EtGl~~~~l~~~~ll~~~~~~~~---~~~~~~~~~~ 234 (236)
|||+.+... .++..+....+ ......|.|.
T Consensus 62 EtGl~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 94 (155)
T 2b06_A 62 ETGLTIQNP---QLVGIKNWPLDTGGRYIVICYKAT 94 (155)
T ss_dssp HHSEEEESC---EEEEEEEEECTTSCEEEEEEEEEC
T ss_pred HhCccccCC---cEEEEEeeccCCCceEEEEEEEEE
Confidence 999988744 34454444332 2445555553
No 51
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.27 E-value=1.6e-11 Score=106.05 Aligned_cols=84 Identities=24% Similarity=0.312 Sum_probs=62.9
Q ss_pred CceEEEEEEE---eCCCeEEEEEEcCCCCCCCCeEEeccccCCC--CCCCCCCCCCCCCCchhhhccchHhHHHHHHHHH
Q 026577 125 SPLGNGAVVE---TSDKKILLLQRSNNVGEFPGHFVFPGGHPEP--QDAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (236)
Q Consensus 125 ~~lgv~~vl~---t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep--~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (236)
..++|.++++ +.+++|||+||+.. .++|.|.+|||++|+ +|+ +.+||+||+
T Consensus 21 p~v~v~~vi~~~~~~~~~vLLv~R~~~--~~~g~W~lPGG~ve~~~gEs----------------------~~~AA~REl 76 (240)
T 3gz5_A 21 QLLTVDAVLFTYHDQQLKVLLVQRSNH--PFLGLWGLPGGFIDETCDES----------------------LEQTVLRKL 76 (240)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEECCSS--SSTTCEECSEEECCTTTCSB----------------------HHHHHHHHH
T ss_pred CccEEEEEEEEEeCCCcEEEEEECcCC--CCCCCEECCccccCCCCCcC----------------------HHHHHHHHH
Confidence 3467777776 33469999999853 568999999999999 998 999999999
Q ss_pred HHhhCCCCCCCccceeEEeeeeee--c--ceeeeeEEEEe
Q 026577 200 VEEIGVPSESLVSYSLLIRYQVVV--P--ALLLCGYMCTS 235 (236)
Q Consensus 200 ~EEtGl~~~~l~~~~ll~~~~~~~--~--~~~~~~~~~~~ 235 (236)
.||||+....+ ..+..+.... | ..+...|+|.+
T Consensus 77 ~EEtGl~~~~~---~~l~~~~~~~r~~~~~~~~~~y~a~~ 113 (240)
T 3gz5_A 77 AEKTAVVPPYI---EQLCTVGNNSRDARGWSVTVCYTALM 113 (240)
T ss_dssp HHHHSSCCSEE---EEEEEEEESSSSTTSCEEEEEEEEEC
T ss_pred HHHHCCCCCce---eeEEEeCCCccCCCceEEEEEEEEEe
Confidence 99999988654 3445544432 2 25667777754
No 52
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.26 E-value=1.4e-11 Score=103.52 Aligned_cols=65 Identities=25% Similarity=0.443 Sum_probs=51.1
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
..++|.+++.+ +|+|||+||+. +|.|.||||++|++|+ +.+||+||+.||||
T Consensus 67 ~~~~v~~vv~~-~~~vLLv~r~~-----~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 118 (205)
T 3q1p_A 67 PKVDIRAVVFQ-NEKLLFVKEKS-----DGKWALPGGWADVGYT----------------------PTEVAAKEVFEETG 118 (205)
T ss_dssp CEEEEEEEEEE-TTEEEEEEC--------CCEECSEEECCTTCC----------------------HHHHHHHHHHHHHS
T ss_pred CcceEEEEEEE-CCEEEEEEEcC-----CCcEECCcCccCCCCC----------------------HHHHHHHHHHHHHC
Confidence 44677777775 88999999873 5899999999999998 99999999999999
Q ss_pred CCCCCCccceeEEeee
Q 026577 205 VPSESLVSYSLLIRYQ 220 (236)
Q Consensus 205 l~~~~l~~~~ll~~~~ 220 (236)
+.+... .++..+.
T Consensus 119 l~v~~~---~~l~~~~ 131 (205)
T 3q1p_A 119 YEVDHF---KLLAIFD 131 (205)
T ss_dssp EEEEEE---EEEEEEE
T ss_pred Cccccc---eEEEEEe
Confidence 987633 3455443
No 53
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.26 E-value=8.7e-12 Score=100.99 Aligned_cols=57 Identities=21% Similarity=0.428 Sum_probs=50.6
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
.+|++++++.+|++||++|+. +|.|.||||++|++|+ +.+||+||+.||||+.
T Consensus 9 ~~v~~~i~~~~~~vLl~~r~~-----~~~w~~p~G~~e~gE~----------------------~~~aa~RE~~EE~G~~ 61 (164)
T 2kdv_A 9 PNVGIVICNRQGQVMWARRFG-----QHSWQFPQGGINPGES----------------------AEQAMYRELFEEVGLS 61 (164)
T ss_dssp EEEEEEEECTTSEEEEEEETT-----CCCEECCEEECCTTCC----------------------HHHHHHHHHHHHHCCC
T ss_pred cEEEEEEEccCCEEEEEEEcC-----CCeEECCeeecCCCCC----------------------HHHHHHHHHHHHHCCC
Confidence 467778888899999999884 5899999999999998 9999999999999999
Q ss_pred CCCC
Q 026577 207 SESL 210 (236)
Q Consensus 207 ~~~l 210 (236)
+..+
T Consensus 62 ~~~~ 65 (164)
T 2kdv_A 62 RKDV 65 (164)
T ss_dssp GGGE
T ss_pred ccce
Confidence 8743
No 54
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.25 E-value=7.1e-12 Score=104.44 Aligned_cols=62 Identities=35% Similarity=0.600 Sum_probs=51.0
Q ss_pred ccCCceEEEEEEEeC-CCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHH
Q 026577 122 HTASPLGNGAVVETS-DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVV 200 (236)
Q Consensus 122 ~~~~~lgv~~vl~t~-dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~ 200 (236)
+..+.++|++++++. +++|||+||.. ..+|.|.||||++|++|+ +.+||+||++
T Consensus 22 ~~~~~v~v~~~v~~~~~~~vLL~~r~~---~~~g~w~lPGG~ve~gEs----------------------~~~aA~REl~ 76 (199)
T 3h95_A 22 SMSHQVGVAGAVFDESTRKILVVQDRN---KLKNMWKFPGGLSEPEED----------------------IGDTAVREVF 76 (199)
T ss_dssp ----CCEEEEEEEETTTTEEEEEEESS---SSTTSBBCCEEECCTTCC----------------------HHHHHHHHHH
T ss_pred cCcccceEEEEEEeCCCCEEEEEEEcC---CCCCCEECCccccCCCCC----------------------HHHHHHHHHH
Confidence 345678887788765 48999999874 247999999999999998 9999999999
Q ss_pred HhhCCCCC
Q 026577 201 EEIGVPSE 208 (236)
Q Consensus 201 EEtGl~~~ 208 (236)
||||+.+.
T Consensus 77 EEtGl~~~ 84 (199)
T 3h95_A 77 EETGIKSE 84 (199)
T ss_dssp HHHCCCEE
T ss_pred HHhCCccc
Confidence 99999976
No 55
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.24 E-value=1.1e-11 Score=97.06 Aligned_cols=58 Identities=28% Similarity=0.501 Sum_probs=48.5
Q ss_pred CceEEEEEEEeC-CCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhh
Q 026577 125 SPLGNGAVVETS-DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI 203 (236)
Q Consensus 125 ~~lgv~~vl~t~-dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt 203 (236)
...++++++.+. +|++||+||. +|.|.||||++|++|+ +.++|+||+.|||
T Consensus 17 ~~~~~~~vi~~~~~~~vLl~~r~------~g~w~~PgG~ve~gE~----------------------~~~aa~RE~~EEt 68 (148)
T 2azw_A 17 TRYAAYIIVSKPENNTMVLVQAP------NGAYFLPGGEIEGTET----------------------KEEAIHREVLEEL 68 (148)
T ss_dssp ECCEEEEECEEGGGTEEEEEECT------TSCEECSEEECCTTCC----------------------HHHHHHHHHHHHH
T ss_pred eeeEEEEEEECCCCCeEEEEEcC------CCCEeCCCcccCCCCC----------------------HHHHHHHHHHHHh
Confidence 344666677765 6899999974 2899999999999998 9999999999999
Q ss_pred CCCCCCC
Q 026577 204 GVPSESL 210 (236)
Q Consensus 204 Gl~~~~l 210 (236)
|+.+..+
T Consensus 69 Gl~~~~~ 75 (148)
T 2azw_A 69 GISVEIG 75 (148)
T ss_dssp SEEEEEE
T ss_pred CCeeEee
Confidence 9987643
No 56
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.24 E-value=6.6e-12 Score=98.51 Aligned_cols=55 Identities=33% Similarity=0.506 Sum_probs=46.9
Q ss_pred EEEEEEeCC-CeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 129 NGAVVETSD-KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 129 v~~vl~t~d-g~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
+++++++.+ |+|||+||+. +|.|.||||++|++|+ +.+||+||+.||||+.+
T Consensus 7 ~~~~i~~~~~~~vLl~~r~~-----~g~w~~PgG~ve~gEs----------------------~~~aa~RE~~EEtGl~~ 59 (146)
T 2jvb_A 7 RGAAIFNENLSKILLVQGTE-----SDSWSFPRGKISKDEN----------------------DIDCCIREVKEEIGFDL 59 (146)
T ss_dssp EEEEEBCTTSSEEEEECCSS-----SSCCBCCEECCCSSSC----------------------HHHHHHHHHHHHTSCCC
T ss_pred EEEEEEeCCCCEEEEEEEcC-----CCcEECCcccCCCCCC----------------------HHHHHHHHHHHHHCCCc
Confidence 455666665 8999998763 4999999999999998 99999999999999988
Q ss_pred CCC
Q 026577 208 ESL 210 (236)
Q Consensus 208 ~~l 210 (236)
..+
T Consensus 60 ~~~ 62 (146)
T 2jvb_A 60 TDY 62 (146)
T ss_dssp SSS
T ss_pred hHh
Confidence 754
No 57
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.23 E-value=1.8e-11 Score=103.23 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=51.7
Q ss_pred CceEEEEEEEe-CCCeEEEEEEcCCCCC----CCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHH
Q 026577 125 SPLGNGAVVET-SDKKILLLQRSNNVGE----FPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (236)
Q Consensus 125 ~~lgv~~vl~t-~dg~vLl~rRs~~~~~----~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (236)
++-+|++++++ .++++||+|+.+.... .++.|+||||++|++|+ +.+||+||+
T Consensus 56 ~~~av~vl~~~~~~~~vLLvrq~R~~~~~~~~~~~~welPgG~ve~gE~----------------------~~~aA~REl 113 (209)
T 1g0s_A 56 RGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEGES----------------------VEDVARREA 113 (209)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECGGGGGGSSCSEEEECEEEECCTTCC----------------------HHHHHHHHH
T ss_pred CCCEEEEEEEECCCCEEEEEEeecccCCCCCCCCeEEEeCcccCCCCcC----------------------HHHHHHHHH
Confidence 45577778887 5789999887643211 26889999999999998 999999999
Q ss_pred HHhhCCCCCCC
Q 026577 200 VEEIGVPSESL 210 (236)
Q Consensus 200 ~EEtGl~~~~l 210 (236)
.||||+.+..+
T Consensus 114 ~EEtGl~~~~~ 124 (209)
T 1g0s_A 114 IEEAGLIVKRT 124 (209)
T ss_dssp HHHHCCCCCCE
T ss_pred HHHcCcccCcE
Confidence 99999998754
No 58
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.22 E-value=2.1e-11 Score=102.46 Aligned_cols=64 Identities=28% Similarity=0.474 Sum_probs=52.1
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
..++|.++++. ||+|||+||+ +|.|.||||++|++|+ +.+||+||+.||||
T Consensus 69 ~~~~v~~vv~~-~~~vLLvrr~------~g~w~lPgG~ve~gEs----------------------~~~aa~REl~EEtG 119 (206)
T 3o8s_A 69 PKLDTRAAIFQ-EDKILLVQEN------DGLWSLPGGWCDVDQS----------------------VKDNVVKEVKEEAG 119 (206)
T ss_dssp CEEEEEEEEEE-TTEEEEEECT------TSCEECSEEECCTTSC----------------------HHHHHHHHHHHHHC
T ss_pred CCccEEEEEEE-CCEEEEEEec------CCeEECCeeccCCCCC----------------------HHHHHHHHHHHHHC
Confidence 44677777774 6999999987 5899999999999998 99999999999999
Q ss_pred CCCCCCccceeEEeee
Q 026577 205 VPSESLVSYSLLIRYQ 220 (236)
Q Consensus 205 l~~~~l~~~~ll~~~~ 220 (236)
+.+..+ .++..+.
T Consensus 120 l~~~~~---~~l~~~~ 132 (206)
T 3o8s_A 120 LDVEAQ---RVVAILD 132 (206)
T ss_dssp EEEEEE---EEEEEEE
T ss_pred Ccceee---eEEEEEe
Confidence 987643 3455443
No 59
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.20 E-value=1.8e-11 Score=103.56 Aligned_cols=79 Identities=20% Similarity=0.287 Sum_probs=56.7
Q ss_pred EEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCC-CCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 129 NGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQD-AGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 129 v~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e-~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
+.+++.+.++++|+.|| ++|+|.||||++|++| + +.+||+||+.||||+.+
T Consensus 47 vv~~i~~~~~~vLl~~r------~~g~w~~PGG~ve~gE~t----------------------~~~aa~REl~EEtGl~~ 98 (212)
T 1u20_A 47 KLFDRVPIRRVLLMMMR------FDGRLGFPGGFVDTRDIS----------------------LEEGLKRELEEELGPAL 98 (212)
T ss_dssp EETTTEECCEEEEEEEE------TTSCEECSEEEECTTTSC----------------------HHHHHHHHHHHHHCGGG
T ss_pred EEEEEEecCCEEEEEEe------CCCeEECCCcccCCCCCC----------------------HHHHHHHHHHHHHCCCc
Confidence 33445567789999988 3699999999999999 8 99999999999999988
Q ss_pred CCCc--cceeEEeeeeeec-ceeeeeEEEEe
Q 026577 208 ESLV--SYSLLIRYQVVVP-ALLLCGYMCTS 235 (236)
Q Consensus 208 ~~l~--~~~ll~~~~~~~~-~~~~~~~~~~~ 235 (236)
..+. ....+......++ ......|.|..
T Consensus 99 ~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~~ 129 (212)
T 1u20_A 99 ATVEVTEDDYRSSQVREHPQKCVTHFYIKEL 129 (212)
T ss_dssp GGCCCCGGGEEEEEEECTTSCEEEEEEEEEC
T ss_pred cccceeeeeEEEeccccCCCcEEEEEEEEEe
Confidence 7543 1112333333343 45566676654
No 60
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.19 E-value=9.5e-11 Score=101.07 Aligned_cols=65 Identities=26% Similarity=0.397 Sum_probs=53.5
Q ss_pred ceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEec-cccCCCC------CCCCCCCCCCCCCchhhhccchHhHHHHHHHH
Q 026577 126 PLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFP-GGHPEPQ------DAGITSHPCGSTDSEFINHKVSQEMFDSITRE 198 (236)
Q Consensus 126 ~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fP-GG~~Ep~------e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~RE 198 (236)
..++++++++++|++||.||+..+..+||+|++| |||++++ |+. ..+.+||+||
T Consensus 59 h~av~v~v~~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~Ge~E~~~E~~-------------------~~~~~Aa~RE 119 (235)
T 2dho_A 59 HRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDA-------------------LGVRRAAQRR 119 (235)
T ss_dssp EEEEEEEEECTTCCEEEEEECTTCSSSTTCEESSEEECCBSSHHHHCCGGG-------------------HHHHHHHHHH
T ss_pred EEEEEEEEEcCCCEEEEEEecCcCCCCCCcEEeccCceecCCCcccccccc-------------------hhHHHHHHHH
Confidence 3467778888899999999998777899999999 5999998 430 0148999999
Q ss_pred HHHhhCCCCCC
Q 026577 199 VVEEIGVPSES 209 (236)
Q Consensus 199 l~EEtGl~~~~ 209 (236)
+.|||||....
T Consensus 120 l~EElGi~~~~ 130 (235)
T 2dho_A 120 LKAELGIPLEE 130 (235)
T ss_dssp HHHHHCCCGGG
T ss_pred HHHHHCCCccc
Confidence 99999998763
No 61
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.17 E-value=1.3e-10 Score=102.00 Aligned_cols=86 Identities=26% Similarity=0.369 Sum_probs=60.1
Q ss_pred CceEEEEEEEeC-----CCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHH
Q 026577 125 SPLGNGAVVETS-----DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (236)
Q Consensus 125 ~~lgv~~vl~t~-----dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (236)
..++|.++++.- +++|||++|... .++|.|.+|||++|++|+ +.+||+||+
T Consensus 38 p~v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~lPGG~ve~gEs----------------------~~~AA~REl 93 (273)
T 2fml_A 38 PSLTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWALPGGFVNRNES----------------------TEDSVLRET 93 (273)
T ss_dssp CEEEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEECCEEECCTTSC----------------------HHHHHHHHH
T ss_pred CceEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEECCccCCCCCcC----------------------HHHHHHHHH
Confidence 346677666642 348999999865 567999999999999998 999999999
Q ss_pred HHhhCCCCCCCccceeEEeeeeee--c--ceeeeeEEEEe
Q 026577 200 VEEIGVPSESLVSYSLLIRYQVVV--P--ALLLCGYMCTS 235 (236)
Q Consensus 200 ~EEtGl~~~~l~~~~ll~~~~~~~--~--~~~~~~~~~~~ 235 (236)
.||||+.+... ....+..|.... | ......|+|.+
T Consensus 94 ~EEtGl~v~~~-~l~~l~~~~~~~r~~~~~~~~~~y~a~~ 132 (273)
T 2fml_A 94 KEETGVVISQE-NIEQLHSFSRPDRDPRGWVVTVSYLAFI 132 (273)
T ss_dssp HHHHCCCCCGG-GEEEEEEECCTTSSTTSSEEEEEEEEEC
T ss_pred HHHHCCCCCcC-cEEEEEEEcCCCCCCCceEEEEEEEEEe
Confidence 99999876532 122233332211 1 24556777754
No 62
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.17 E-value=1.1e-10 Score=101.36 Aligned_cols=64 Identities=27% Similarity=0.406 Sum_probs=53.1
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEecc-ccCCCC------CCCCCCCCCCCCCchhhhccchHhHHHHHHHHH
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPG-GHPEPQ------DAGITSHPCGSTDSEFINHKVSQEMFDSITREV 199 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPG-G~~Ep~------e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl 199 (236)
.++.+++++++|++||.||+..+..+||+|++|+ ||++++ |+. ..+.+||+||+
T Consensus 71 ~av~v~v~~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G~~E~~~Et~-------------------~~~~eAA~REl 131 (246)
T 2pny_A 71 RAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDA-------------------IGVRRAAQRRL 131 (246)
T ss_dssp EEEEEEEECTTCCEEEEEECTTCSSSTTCBCCSEEECCBSSHHHHCCGGG-------------------HHHHHHHHHHH
T ss_pred EEEEEEEEeCCCEEEEEEecCCCCCCCCceEeccCceeccCCcccccccc-------------------hhHHHHHHHHH
Confidence 4677788888999999999987778999999995 999998 540 00389999999
Q ss_pred HHhhCCCCCC
Q 026577 200 VEEIGVPSES 209 (236)
Q Consensus 200 ~EEtGl~~~~ 209 (236)
.|||||....
T Consensus 132 ~EElGi~~~~ 141 (246)
T 2pny_A 132 QAELGIPGEQ 141 (246)
T ss_dssp HHHHCCCTTT
T ss_pred HHHHCCCccc
Confidence 9999999764
No 63
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.17 E-value=8.6e-11 Score=103.36 Aligned_cols=60 Identities=23% Similarity=0.321 Sum_probs=50.2
Q ss_pred ceEEEEEEEeC-CCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhC
Q 026577 126 PLGNGAVVETS-DKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIG 204 (236)
Q Consensus 126 ~lgv~~vl~t~-dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtG 204 (236)
...+++++++. +|+|||+||... +|.|.||||++|++|+ +.+||+||+.||||
T Consensus 101 v~~v~avv~~~~~~~vLLv~r~~~----~g~W~lPgG~ve~gEs----------------------~~eAA~REl~EEtG 154 (271)
T 2a6t_A 101 IPVRGAIMLDMSMQQCVLVKGWKA----SSGWGFPKGKIDKDES----------------------DVDCAIREVYEETG 154 (271)
T ss_dssp CCEEEEEEBCSSSSEEEEEEESST----TCCCBCSEEECCTTCC----------------------HHHHHHHHHHHHHC
T ss_pred CCeEEEEEEECCCCEEEEEEEeCC----CCeEECCcccCCCCcC----------------------HHHHHHHHHHHHhC
Confidence 34556666665 489999999743 5899999999999999 99999999999999
Q ss_pred CCCCCCc
Q 026577 205 VPSESLV 211 (236)
Q Consensus 205 l~~~~l~ 211 (236)
+.+..+.
T Consensus 155 l~~~~l~ 161 (271)
T 2a6t_A 155 FDCSSRI 161 (271)
T ss_dssp CCCTTTC
T ss_pred CCceeee
Confidence 9988643
No 64
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.16 E-value=7.9e-11 Score=97.76 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=50.0
Q ss_pred CceEEEEEEEeC-CCeEEEEEEcCCC----CC-CCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHH
Q 026577 125 SPLGNGAVVETS-DKKILLLQRSNNV----GE-FPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITRE 198 (236)
Q Consensus 125 ~~lgv~~vl~t~-dg~vLl~rRs~~~----~~-~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~RE 198 (236)
++-+|++++++. ++++||+|+.+.. +. .++.|.||||++| +|+ +.+||+||
T Consensus 44 ~~~av~v~~~~~~~~~vlLv~~~r~~~~~~~~~~~~~w~lPgG~ve-gE~----------------------~~~aa~RE 100 (191)
T 3o6z_A 44 RGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLD-NDE----------------------PEVCIRKE 100 (191)
T ss_dssp CCCEEEEEEEETTTTEEEEEEEECHHHHTTTCTTCEEEECEEEECC-SSC----------------------HHHHHHHH
T ss_pred cCCEEEEEEEECCCCEEEEEEcCCccccccCCCCCeEEEecceEeC-CCC----------------------HHHHHHHH
Confidence 445677777775 5899999887421 11 6789999999999 998 99999999
Q ss_pred HHHhhCCCCCCC
Q 026577 199 VVEEIGVPSESL 210 (236)
Q Consensus 199 l~EEtGl~~~~l 210 (236)
+.||||+.+..+
T Consensus 101 l~EEtG~~~~~~ 112 (191)
T 3o6z_A 101 AIEETGYEVGEV 112 (191)
T ss_dssp HHHHC-CCCSCE
T ss_pred HHHHhCCccCcE
Confidence 999999998654
No 65
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.14 E-value=1.1e-10 Score=104.62 Aligned_cols=58 Identities=26% Similarity=0.404 Sum_probs=50.1
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
.+|++++. .+|+|||+||... ..+|+|.||||++|++|+ +.+||+||+.||||+.
T Consensus 209 ~~v~~vv~-~~~~vLL~~r~~~--~~~g~w~lPgG~ve~gEt----------------------~~~aa~REl~EEtGl~ 263 (352)
T 2qjt_B 209 VTVDALVI-VNDHILMVQRKAH--PGKDLWALPGGFLECDET----------------------IAQAIIRELFEETNIN 263 (352)
T ss_dssp EEEEEEEE-ETTEEEEEEESSS--SSTTCEECSEEECCTTSC----------------------HHHHHHHHHHHHHCCS
T ss_pred eEEEEEEE-ECCEEEEEEEcCC--CCCCeEECCCCcCCCCCC----------------------HHHHHHHHHHHhhCCC
Confidence 45666666 6899999999865 357999999999999998 9999999999999999
Q ss_pred CCC
Q 026577 207 SES 209 (236)
Q Consensus 207 ~~~ 209 (236)
+..
T Consensus 264 v~~ 266 (352)
T 2qjt_B 264 LTH 266 (352)
T ss_dssp CCH
T ss_pred ccc
Confidence 873
No 66
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.13 E-value=8.5e-11 Score=99.01 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=41.5
Q ss_pred CeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCCC
Q 026577 138 KKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSES 209 (236)
Q Consensus 138 g~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~ 209 (236)
+++||+++.+. ...++.|.||||++|++|+ +.+||+||+.||||+.+..
T Consensus 77 ~~vlLv~q~R~-~~~~~~welPgG~ve~gEs----------------------~~~aA~REl~EEtGl~~~~ 125 (212)
T 2dsc_A 77 ECIVLVKQFRP-PMGGYCIEFPAGLIDDGET----------------------PEAAALRELEEETGYKGDI 125 (212)
T ss_dssp CEEEEEEEEEG-GGTEEEEECCEEECCTTCC----------------------HHHHHHHHHHHHHCCCCEE
T ss_pred cEEEEEEeecC-CCCCcEEECCccccCCCCC----------------------HHHHHHHHHHHHhCCCccc
Confidence 48999886533 2456899999999999998 9999999999999998764
No 67
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.12 E-value=9.7e-11 Score=104.32 Aligned_cols=58 Identities=22% Similarity=0.399 Sum_probs=50.2
Q ss_pred eEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCC
Q 026577 127 LGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVP 206 (236)
Q Consensus 127 lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~ 206 (236)
.+|++++. .+|++||+||+.. ..+|+|.||||++|++|+ +.+||+||+.||||+.
T Consensus 204 ~~v~~vi~-~~~~vLL~~r~~~--~~~g~w~lPgG~ve~gE~----------------------~~~aa~REl~EEtGl~ 258 (341)
T 2qjo_A 204 ITTDAVVV-QAGHVLMVRRQAK--PGLGLIALPGGFIKQNET----------------------LVEGMLRELKEETRLK 258 (341)
T ss_dssp EEEEEEEE-ETTEEEEEECCSS--SSTTCEECSEEECCTTSC----------------------HHHHHHHHHHHHHCCS
T ss_pred eEEEEEEE-eCCEEEEEEecCC--CCCCeEECCCCcCCCCCC----------------------HHHHHHHHHhhhhCCc
Confidence 56666666 6899999999854 458999999999999998 9999999999999999
Q ss_pred CCC
Q 026577 207 SES 209 (236)
Q Consensus 207 ~~~ 209 (236)
+..
T Consensus 259 ~~~ 261 (341)
T 2qjo_A 259 VPL 261 (341)
T ss_dssp SCH
T ss_pred ccc
Confidence 874
No 68
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.10 E-value=6.1e-11 Score=102.36 Aligned_cols=68 Identities=26% Similarity=0.483 Sum_probs=46.7
Q ss_pred eEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCC
Q 026577 139 KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSE 208 (236)
Q Consensus 139 ~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~ 208 (236)
+|||+||+.+..+++|.|+||||++|++|.....+..+... .-.......+..||+||++|||||.+.
T Consensus 25 ~vLl~~R~~~~~~~~g~~~fPGG~vd~~d~~~~~~~~g~~~--~~~~~~~~a~~~aAiRE~~EE~Gl~l~ 92 (232)
T 3qsj_A 25 EVLVVRRAKTMRFLPGFVAFPGGAADPSDAEMAKRAFGRPV--CAEDDDDPALAVTALRETAEEIGWLLA 92 (232)
T ss_dssp EEEEEEECTTCSSSTTCEECSEEECCHHHHHHHHTCBSCCB--TCCSTTHHHHHHHHHHHHHHHHSCCCS
T ss_pred EEEEEEccCCCCCCCCcEECCceeEecCCCCchhhhccccc--ccccchhhHHHHHHHHHHHHHhCceec
Confidence 89999999888889999999999999988620000000000 000011233789999999999999765
No 69
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.09 E-value=2.1e-10 Score=97.93 Aligned_cols=62 Identities=11% Similarity=0.091 Sum_probs=49.9
Q ss_pred cCCceEEEEEEEe-CCCeEEEEEEcCCCCCC-------------------------------CCeEEeccccCCC-CCCC
Q 026577 123 TASPLGNGAVVET-SDKKILLLQRSNNVGEF-------------------------------PGHFVFPGGHPEP-QDAG 169 (236)
Q Consensus 123 ~~~~lgv~~vl~t-~dg~vLl~rRs~~~~~~-------------------------------~G~~~fPGG~~Ep-~e~~ 169 (236)
..++-+|++++++ .++++||+|+.+. +.+ ++.|+||||++|+ +|+
T Consensus 33 v~~~~aV~vl~~~~~~~~vlLvrQ~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~welPgG~ve~~gEs- 110 (218)
T 3q91_A 33 MKTHDSVTVLLFNSSRRSLVLVKQFRP-AVYAGEVERRFPGSLAAVDQDGPRELQPALPGSAGVTVELCAGLVDQPGLS- 110 (218)
T ss_dssp --CCCEEEEEEEEGGGTEEEEEEEECH-HHHHHHTC-------------------------CCEEEECEEEECCSSSCC-
T ss_pred EEcCCeEEEEEEECCCCEEEEEEcccc-ccccccccccccccccccccccccccccccccCCCeEEECCcceeCCCCCC-
Confidence 3455678888887 4689999987642 122 6899999999999 998
Q ss_pred CCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 170 ITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
+.+||+||+.||||+.+
T Consensus 111 ---------------------~~eaA~REl~EEtGl~~ 127 (218)
T 3q91_A 111 ---------------------LEEVACKEAWEECGYHL 127 (218)
T ss_dssp ---------------------HHHHHHHHHHHHHCBCC
T ss_pred ---------------------HHHHHHHHHHHHhCCcc
Confidence 99999999999999998
No 70
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.09 E-value=8.7e-11 Score=100.14 Aligned_cols=72 Identities=22% Similarity=0.358 Sum_probs=45.7
Q ss_pred EEEEeCCCeEEEEEEcCCCCC--CCCeEEe-ccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 131 AVVETSDKKILLLQRSNNVGE--FPGHFVF-PGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 131 ~vl~t~dg~vLl~rRs~~~~~--~~G~~~f-PGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
.+++..+|++|+.+|....+. .+|.|.| ||||+|++|+.. ....+.+||+||+.|||||.+
T Consensus 72 ~~II~~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~----------------p~EtleeAa~REl~EEtGl~v 135 (211)
T 3e57_A 72 YVVIMDGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGAT----------------PREAFLKGLEREVNEEVDVSL 135 (211)
T ss_dssp EEEEEETTEEEEEEC------------CBSSEECCCBGGGCSS----------------HHHHHHHHHHHHHHHHEEEEE
T ss_pred EEEEEECCEEEEEEECCCCCcccccCCcccccceEEeCCCCCC----------------chhhHHHHHHHHHHHHhCCee
Confidence 344446899999999865432 6789998 999999999610 000168999999999999965
Q ss_pred CCCccceeEEeeee
Q 026577 208 ESLVSYSLLIRYQV 221 (236)
Q Consensus 208 ~~l~~~~ll~~~~~ 221 (236)
. ...+++++..
T Consensus 136 ~---~~~~ig~~~~ 146 (211)
T 3e57_A 136 R---ELEFLGLINS 146 (211)
T ss_dssp E---EEEEEEEEEC
T ss_pred e---ccEEEEEEec
Confidence 4 3456666544
No 71
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=99.02 E-value=5.2e-10 Score=99.98 Aligned_cols=63 Identities=16% Similarity=0.203 Sum_probs=55.2
Q ss_pred ceEEEEEEEeCCC---eEEEEEEcCCCCCCCCeEE-eccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHH
Q 026577 126 PLGNGAVVETSDK---KILLLQRSNNVGEFPGHFV-FPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVE 201 (236)
Q Consensus 126 ~lgv~~vl~t~dg---~vLl~rRs~~~~~~~G~~~-fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~E 201 (236)
..+|-+.+.+.++ ++++.||+..+..+||+|+ ++|||++++|+ +.+||+||+.|
T Consensus 118 ~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~svaG~i~~GEs----------------------~~eaA~REl~E 175 (300)
T 3dup_A 118 AYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDNMVAGGQPADLS----------------------LRQNLIKECAE 175 (300)
T ss_dssp EEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEESEEEECCTTSC----------------------HHHHHHHHHHH
T ss_pred EEEEEEEEEEecCCeeEEEEEeCCCcccCCCCccccccccCCCCCCC----------------------HHHHHHHHHHH
Confidence 3466667777777 9999999999999999995 89999999998 99999999999
Q ss_pred hhCCCCCCC
Q 026577 202 EIGVPSESL 210 (236)
Q Consensus 202 EtGl~~~~l 210 (236)
|+||+...+
T Consensus 176 ElGI~~~~~ 184 (300)
T 3dup_A 176 EADLPEALA 184 (300)
T ss_dssp HHCCCHHHH
T ss_pred HhCCChhhh
Confidence 999987543
No 72
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=98.98 E-value=1.2e-09 Score=99.10 Aligned_cols=49 Identities=20% Similarity=0.369 Sum_probs=42.4
Q ss_pred eCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCCCC
Q 026577 135 TSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSESL 210 (236)
Q Consensus 135 t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~l 210 (236)
+.+.+|||++|... |.|.||||++|++|+ +.+||+||+.||||+.+...
T Consensus 35 ~~~~~vLLv~r~~~-----g~W~lPgG~ve~gEs----------------------~~~AA~REl~EEtGl~~~~~ 83 (364)
T 3fjy_A 35 LDSIEVCIVHRPKY-----DDWSWPKGKLEQNET----------------------HRHAAVREIGEETGSPVKLG 83 (364)
T ss_dssp HTTEEEEEEEETTT-----TEEECCEEECCTTCC----------------------HHHHHHHHHHHHHSCCEEEE
T ss_pred CCceEEEEEEcCCC-----CCEECCcCCCCCCCC----------------------HHHHHHHHHHHHhCCeeeec
Confidence 34458999999633 999999999999999 99999999999999987643
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=98.94 E-value=1.2e-09 Score=92.97 Aligned_cols=70 Identities=26% Similarity=0.336 Sum_probs=48.1
Q ss_pred CeEEEEEEcCCCCCCCCeEEeccccCCCCC-CCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCCCC--Cccce
Q 026577 138 KKILLLQRSNNVGEFPGHFVFPGGHPEPQD-AGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPSES--LVSYS 214 (236)
Q Consensus 138 g~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e-~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~~~--l~~~~ 214 (236)
+++|+++|. +|.|+||||++|++| + +.+||+||+.||||+.+.. +....
T Consensus 65 ~~~ll~~r~------~g~w~lPGG~ve~gE~t----------------------~~eaa~REl~EEtGl~~~~~~l~~l~ 116 (217)
T 2xsq_A 65 YAILMQMRF------DGRLGFPGGFVDTQDRS----------------------LEDGLNRELREELGEAAAAFRVERTD 116 (217)
T ss_dssp EEEEEEEET------TSCEECSEEECCTTCSS----------------------HHHHHHHHHHHHHCGGGGGCCCCGGG
T ss_pred CcEEEEEcc------CCeEECCceecCCCCCC----------------------HHHHHHHHHHHHHCCCCccceeEEEE
Confidence 356666664 589999999999999 8 9999999999999998873 22211
Q ss_pred eEEeeeeeecceeeeeEEEEe
Q 026577 215 LLIRYQVVVPALLLCGYMCTS 235 (236)
Q Consensus 215 ll~~~~~~~~~~~~~~~~~~~ 235 (236)
.+.......+......|.|..
T Consensus 117 ~~~~~~~~~~~~~~~~f~~~l 137 (217)
T 2xsq_A 117 YRSSHVGSGPRVVAHFYAKRL 137 (217)
T ss_dssp EEEEEECSSSSEEEEEEEEEC
T ss_pred EEeecCCCCCeEEEEEEEEEe
Confidence 122212222345566677654
No 74
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.71 E-value=1.3e-08 Score=85.60 Aligned_cols=58 Identities=21% Similarity=0.251 Sum_probs=41.9
Q ss_pred CeEEeccccCCCCC-CCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCC-CCCCCccceeEEeeeeeec-ceeeee
Q 026577 154 GHFVFPGGHPEPQD-AGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGV-PSESLVSYSLLIRYQVVVP-ALLLCG 230 (236)
Q Consensus 154 G~~~fPGG~~Ep~e-~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl-~~~~l~~~~ll~~~~~~~~-~~~~~~ 230 (236)
|+|+||||++|++| + +++++.||+.||+|+ .+.. .. .+......+| .+.+..
T Consensus 54 G~weFPGGkVe~gE~t----------------------~e~aL~REl~EElg~~~V~~-~~--y~~s~~~~yp~~V~LHf 108 (214)
T 3kvh_A 54 GLLGFPGGFVDRRFWS----------------------LEDGLNRVLGLGLGCLRLTE-AD--YLSSHLTEGPHRVVAHL 108 (214)
T ss_dssp SCEECSEEEECTTTCC----------------------HHHHHHHSCCSCC---CCCG-GG--EEEEEEC----CEEEEE
T ss_pred CEEeCCCccCCCCCCC----------------------HHHHHHHHHHHhhCCeeeee-ee--eEEEEeccCCCEEEEEE
Confidence 99999999999999 7 999999999999997 3432 22 2333334455 688999
Q ss_pred EEEEeC
Q 026577 231 YMCTST 236 (236)
Q Consensus 231 ~~~~~~ 236 (236)
|.|+.+
T Consensus 109 Y~crl~ 114 (214)
T 3kvh_A 109 YARQLT 114 (214)
T ss_dssp EEEECC
T ss_pred EEEEee
Confidence 999864
No 75
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.70 E-value=2e-08 Score=89.12 Aligned_cols=42 Identities=24% Similarity=0.482 Sum_probs=38.3
Q ss_pred eEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhhCCCC
Q 026577 139 KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEIGVPS 207 (236)
Q Consensus 139 ~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEtGl~~ 207 (236)
+|||++|... |.|.+|||++|++|+ +.+||+||+.||||+.+
T Consensus 140 ~vLl~~r~~~-----g~W~lPGG~Ve~GEs----------------------~~eAA~REl~EETGl~~ 181 (292)
T 1q33_A 140 QFVAIKRKDC-----GEWAIPGGMVDPGEK----------------------ISATLKREFGEEALNSL 181 (292)
T ss_dssp EEEEEECTTT-----CSEECCCEECCTTCC----------------------HHHHHHHHHHHHHSCGG
T ss_pred EEEEEEecCC-----CcEeCCCcccCCCCC----------------------HHHHHHHHHHHHhCCcc
Confidence 6999998743 899999999999999 99999999999999973
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=98.33 E-value=1.7e-06 Score=73.19 Aligned_cols=55 Identities=24% Similarity=0.401 Sum_probs=44.1
Q ss_pred CCceEEEEEEEe-CCC--eEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHH
Q 026577 124 ASPLGNGAVVET-SDK--KILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVV 200 (236)
Q Consensus 124 ~~~lgv~~vl~t-~dg--~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~ 200 (236)
.....|.++++. .++ +||++|+. . +.|.+|||++|++|+ ..++++||+.
T Consensus 56 g~R~sV~avil~~~~~~phVLLlq~~-~-----~~f~LPGGkle~gE~----------------------~~eaL~REL~ 107 (208)
T 3bho_A 56 GMRRTVEGVLIVHEHRLPHVLLLQLG-T-----TFFKLPGGELNPGED----------------------EVEGLKRLMT 107 (208)
T ss_dssp CSEEEEEEEEEEEETTEEEEEEEEEE-T-----TEEECSEEECCTTCC----------------------HHHHHHHHHH
T ss_pred CCceEEEEEEEEcCCCCcEEEEEEcC-C-----CcEECCCcccCCCCC----------------------HHHHHHHHHH
Confidence 345566666654 334 69999985 2 589999999999999 8999999999
Q ss_pred HhhCCC
Q 026577 201 EEIGVP 206 (236)
Q Consensus 201 EEtGl~ 206 (236)
||+|+.
T Consensus 108 EELg~~ 113 (208)
T 3bho_A 108 EILGRQ 113 (208)
T ss_dssp HHHCCC
T ss_pred HHhCCC
Confidence 999973
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=98.25 E-value=1.3e-06 Score=78.59 Aligned_cols=75 Identities=19% Similarity=0.191 Sum_probs=52.6
Q ss_pred CceEEEEEEEeCCCeEEEEEEcCCCCCCCCeEEeccccCCCCCCCCCCCCCCCCCchhhhccchHhHHHHHHHHHHHhh-
Q 026577 125 SPLGNGAVVETSDKKILLLQRSNNVGEFPGHFVFPGGHPEPQDAGITSHPCGSTDSEFINHKVSQEMFDSITREVVEEI- 203 (236)
Q Consensus 125 ~~lgv~~vl~t~dg~vLl~rRs~~~~~~~G~~~fPGG~~Ep~e~~~~~~~~~~~~~~~~~~~~~~~l~~aa~REl~EEt- 203 (236)
..+.|++++. .||+|||+ . . .| |.+|||+++.++. .+++||++||+
T Consensus 182 p~~~vgaii~-~~g~vLL~--~-~----~G-W~LPG~~~~~~~~------------------------~~a~RE~~EEtt 228 (321)
T 3rh7_A 182 GEIRLGAVLE-QQGAVFLA--G-N----ET-LSLPNCTVEGGDP------------------------ARTLAAYLEQLT 228 (321)
T ss_dssp SCEEEEEEEE-SSSCEEEB--C-S----SE-EBCCEEEESSSCH------------------------HHHHHHHHHHHH
T ss_pred CcceEEEEEE-ECCEEEEe--e-C----CC-ccCCcccCCCChh------------------------HHHHHHHHHHhc
Confidence 3456665555 68999999 2 2 38 9999997766554 58999999997
Q ss_pred CCCCCCCccceeEEeeeeeecceeeeeEEEEe
Q 026577 204 GVPSESLVSYSLLIRYQVVVPALLLCGYMCTS 235 (236)
Q Consensus 204 Gl~~~~l~~~~ll~~~~~~~~~~~~~~~~~~~ 235 (236)
|+.++. ..|+++|++..-+..-.-|.|+.
T Consensus 229 Gl~v~~---~~L~~v~~~~~~~~~~i~f~~~~ 257 (321)
T 3rh7_A 229 GLNVTI---GFLYSVYEDKSDGRQNIVYHALA 257 (321)
T ss_dssp SSCEEE---EEEEEEEECTTTCCEEEEEEEEE
T ss_pred CCEEee---ceEEEEEEcCCCceEEEEEEEEe
Confidence 999984 35777887644333344666653
No 78
>1kea_A Possible G-T mismatches repair enzyme; DNA repair, DNA glycosylase, DNA mismatch, methylation; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.96.1.2
Probab=91.42 E-value=0.0018 Score=54.90 Aligned_cols=89 Identities=8% Similarity=0.050 Sum_probs=57.4
Q ss_pred ecCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHHHHh--hCCCcccCceEEEeeeEEecCCCCCCcceEEEecC
Q 026577 13 LSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQ--INKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLG 90 (236)
Q Consensus 13 ~~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~~~~--~~p~lfng~kfrl~~~~~~~~~~~~~~~~~~l~lg 90 (236)
|...||||+.|++++++.+|++ |.+. ++.+|.++..+... ..+.-...+.+.-......+.+...+.+++.+.+|
T Consensus 117 L~~lpGIG~~TA~~il~~~~~~-~~~~--vD~~v~Rv~~rl~gl~~~~~~~~~~~l~~~ae~~~P~~~~~~~~~~lv~~G 193 (221)
T 1kea_A 117 ILDLPGVGKYTCAAVMCLAFGK-KAAM--VDANFVRVINRYFGGSYENLNYNHKALWELAETLVPGGKCRDFNLGLMDFS 193 (221)
T ss_dssp HHTSTTCCHHHHHHHHHHTTCC-CCCC--CCHHHHHHHHHHHCGGGTTCCTTSHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred HHhCCCCcHHHHHHHHHHhcCC-Ccce--ecHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHhCChhhHHHHHHHHHHHH
Confidence 3367999999999999999999 6543 78999998875422 22211111111111111122233455688889999
Q ss_pred CcccceeeccCCChhhhhh
Q 026577 91 LTDYRTFVGTNLNPLWEKF 109 (236)
Q Consensus 91 ~T~Yr~fv~t~~~p~~~~~ 109 (236)
.+ +|+..+|.|..|
T Consensus 194 ~~-----~C~~~~P~C~~C 207 (221)
T 1kea_A 194 AI-----ICAPRKPKCEKC 207 (221)
T ss_dssp HH-----TSCSSSCCGGGC
T ss_pred HH-----HcCCCCCCCCCC
Confidence 98 999999998765
No 79
>3n5n_X A/G-specific adenine DNA glycosylase; alpha-helices, helix-hairpin-helix motif, iron-sulfur cluste hydrolase; 2.30A {Homo sapiens}
Probab=89.73 E-value=0.0019 Score=57.07 Aligned_cols=89 Identities=11% Similarity=0.085 Sum_probs=58.8
Q ss_pred ecCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHHHHhhCC-CcccC--ceEEEeeeEEecCCCCCCcceEEEec
Q 026577 13 LSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINK-SLFNG--QKFRYGGHIMRGEGGSSVESHVCLHL 89 (236)
Q Consensus 13 ~~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~~~~~~p-~lfng--~kfrl~~~~~~~~~~~~~~~~~~l~l 89 (236)
++..+|||++|++++++.+|++ |.+. ++.+|.|+..+.---.. .-... ..++.....+.+.+..++.+++.|.+
T Consensus 131 l~~LpGIG~kTA~~iL~~a~g~-p~~~--VDt~V~Rv~~Rlg~i~~~~~~~~~~~~l~~~a~~~lp~~~~~~~h~~L~~~ 207 (287)
T 3n5n_X 131 QQLLPGVGRYTAGAIASIAFGQ-ATGV--VDGNVARVLCRVRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 207 (287)
T ss_dssp HHHSTTCCHHHHHHHHHHHSCC-CCCC--CCHHHHHHHHHHTTCCSCTTSHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred HHHcCCCCHHHHHHHHHHhcCC-CCcc--ccHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4337999999999999999999 6543 89999999875532111 00110 01111011122334455678899999
Q ss_pred CCcccceeeccCCChhhhhh
Q 026577 90 GLTDYRTFVGTNLNPLWEKF 109 (236)
Q Consensus 90 g~T~Yr~fv~t~~~p~~~~~ 109 (236)
|.+ +|+..+|.|..|
T Consensus 208 Gr~-----iC~~r~P~C~~C 222 (287)
T 3n5n_X 208 GAT-----VCTPQRPLCSQC 222 (287)
T ss_dssp HHH-----TSCSSSCCTTSC
T ss_pred hHH-----HcCCCCCCCCCC
Confidence 999 999999998765
No 80
>1kg2_A A/G-specific adenine glycosylase; DNA repair, hydrolase; 1.20A {Escherichia coli} SCOP: a.96.1.2 PDB: 1kg3_A 1muy_A 1kg6_A 1kg5_A 1mun_A 1mud_A 1kg4_A 1weg_A 1wei_A* 1wef_A* 1kg7_A 1kqj_A
Probab=85.18 E-value=0.0028 Score=53.74 Aligned_cols=90 Identities=12% Similarity=0.083 Sum_probs=57.2
Q ss_pred ecCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHHHHh--hCCCc-ccCceEEEeeeEEecCCCCCCcceEEEec
Q 026577 13 LSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQ--INKSL-FNGQKFRYGGHIMRGEGGSSVESHVCLHL 89 (236)
Q Consensus 13 ~~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~~~~--~~p~l-fng~kfrl~~~~~~~~~~~~~~~~~~l~l 89 (236)
|...||||+.|++++++.+|++ |.+ .+|.+|.++..+... ..+.. -.-..++-......+.+...+.+++.|.+
T Consensus 111 L~~lpGIG~~TA~~il~~a~~~-~~~--~vD~~v~Rv~~rl~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~lv~~ 187 (225)
T 1kg2_A 111 VAALPGVGRSTAGAILSLSLGK-HFP--ILDGNVKRVLARCYAVSGWPGKKEVENKLWSLSEQVTPAVGVERFNQAMMDL 187 (225)
T ss_dssp HHTSTTCCHHHHHHHHHHHHCC-SCC--CCCHHHHHHHHHHHTCCSCTTSHHHHHHHHHHHHHHCCSTTHHHHHHHHHHH
T ss_pred HhcCCCCcHHHHHHHHHHhCCC-Ccc--eeCHHHHHHHHHHcCCCCCCCccchHHHHHHHHHHHCCcccHHHHHHHHHHH
Confidence 3467999999999999999999 654 389999999875522 11100 00000111011122223345567888999
Q ss_pred CCcccceeeccCCChhhhhhc
Q 026577 90 GLTDYRTFVGTNLNPLWEKFL 110 (236)
Q Consensus 90 g~T~Yr~fv~t~~~p~~~~~~ 110 (236)
|.+ +|+..+|.|..|.
T Consensus 188 G~~-----~C~~~~P~C~~Cp 203 (225)
T 1kg2_A 188 GAM-----ICTRSKPKCSLCP 203 (225)
T ss_dssp HHH-----TSCSSSCCGGGCT
T ss_pred HHH-----HcCCCCCCCCCCC
Confidence 999 9999999987653
No 81
>2abk_A Endonuclease III; DNA-repair, DNA glycosylase; 1.85A {Escherichia coli} SCOP: a.96.1.1
Probab=84.88 E-value=0.0039 Score=52.26 Aligned_cols=86 Identities=12% Similarity=0.056 Sum_probs=55.0
Q ss_pred cCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHHHHhhCCCcccCceEEEeeeEEecCCCCCCcceEEEecCCcc
Q 026577 14 SCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLTD 93 (236)
Q Consensus 14 ~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~~~~~~p~lfng~kfrl~~~~~~~~~~~~~~~~~~l~lg~T~ 93 (236)
...||||+.++++++..+|++ |... ++.+|.++..+ +--.+. -+-..+.-......+.+..+..+++.+.+|.+
T Consensus 112 ~~l~GIG~~tA~~il~~~~~~-~~~~--vD~~v~Rv~~r-lgl~~~-~~~~~~~~~~~~~~p~~~~~~~~~~l~~~G~~- 185 (211)
T 2abk_A 112 EALPGVGRKTANVVLNTAFGW-PTIA--VDTHIFRVCNR-TQFAPG-KNVEQVEEKLLKVVPAEFKVDCHHWLILHGRY- 185 (211)
T ss_dssp HHSTTCCHHHHHHHHHHHHCC-CCCC--CCHHHHHHHHH-HCSSCC-SSHHHHHHHHHHHSCGGGTTTHHHHHHHHHHH-
T ss_pred HhCCCCChHHHHHHHHHHCCC-CcCC--cCHHHHHHHHH-hCCCCC-CCHHHHHHHHHHhcChhhHHHHHHHHHHHHHH-
Confidence 356999999999999999998 5433 78899888653 321110 00011111111112223455678888888988
Q ss_pred cceeeccCCChhhhhh
Q 026577 94 YRTFVGTNLNPLWEKF 109 (236)
Q Consensus 94 Yr~fv~t~~~p~~~~~ 109 (236)
+|+..+|.|..|
T Consensus 186 ----~C~~~~P~C~~C 197 (211)
T 2abk_A 186 ----TCIARKPRCGSC 197 (211)
T ss_dssp ----TSCSSSCCGGGC
T ss_pred ----HCCCCCCCCCCC
Confidence 999999988765
No 82
>4e9f_A Methyl-CPG-binding domain protein 4; HHH DNA glycosylase family, hydrolase-DNA complex; HET: DNA 3DR; 1.79A {Homo sapiens} PDB: 4e9e_A* 4e9g_A* 4e9h_A* 4ea5_A* 4dk9_A* 1ngn_A 4ea4_A* 4ew4_A* 4evv_A* 4ew0_A* 3iho_A
Probab=83.17 E-value=0.18 Score=40.61 Aligned_cols=40 Identities=8% Similarity=-0.100 Sum_probs=30.2
Q ss_pred cCCCCCCCceeEEEeccCCCC-CCCCCCchhhHHHHHHHHHHh
Q 026577 14 SCPHGFSPSEVSVVFDESYDR-VPHPDNNLENSISEIWDSRVQ 55 (236)
Q Consensus 14 ~~~~g~~~~~v~v~~s~~f~r-~p~p~~~~e~~I~~~W~~~~~ 55 (236)
..+||+|+||++++.+.+||+ ++.+. ++.++.+.|+....
T Consensus 107 ~~LpGVG~yTAdav~~F~~~e~~~V~p--~D~~l~r~l~wl~~ 147 (161)
T 4e9f_A 107 IELHGIGKYGNDSYRIFCVNEWKQVHP--EDHKLNKYHDWLWE 147 (161)
T ss_dssp GGSTTCCHHHHHHHHHHTSSCGGGCCC--CSHHHHHHHHHHHH
T ss_pred hcCCCchHHHHHHHHHHHCCCCCCCCC--CcHHHHHHHHHHHc
Confidence 367999999999999999995 23222 67888888775544
No 83
>1orn_A Endonuclease III; DNA repair, DNA glycosylase, [4Fe-4S] cluster, iron-sulfur cluster, hydrolase/DNA complex; HET: PED; 1.70A {Geobacillus stearothermophilus} SCOP: a.96.1.1 PDB: 1orp_A* 1p59_A*
Probab=80.34 E-value=0.0066 Score=51.58 Aligned_cols=88 Identities=10% Similarity=0.035 Sum_probs=53.8
Q ss_pred ecCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHHHHhhCCCcccCceEEEeeeEEecCCCCCCcceEEEecCCc
Q 026577 13 LSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSRVQINKSLFNGQKFRYGGHIMRGEGGSSVESHVCLHLGLT 92 (236)
Q Consensus 13 ~~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~~~~~~p~lfng~kfrl~~~~~~~~~~~~~~~~~~l~lg~T 92 (236)
|...||||+.|+++++..+|++ |... ++.+|.++..+. --.+.--+-..+.-......+.+...+.++..+.+|.+
T Consensus 115 L~~lpGIG~~TA~~il~~a~g~-~~~~--vD~~v~Rv~~rl-g~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~lv~~G~~ 190 (226)
T 1orn_A 115 LMKLPGVGRKTANVVVSVAFGV-PAIA--VDTHVERVSKRL-GFCRWDDSVLEVEKTLMKIIPKEEWSITHHRMIFFGRY 190 (226)
T ss_dssp HTTSTTCCHHHHHHHHHHHHCC-CCCC--CCHHHHHHHHHH-TSSCTTCCHHHHHHHHHHHSCGGGHHHHHHHHHHHHHH
T ss_pred HHHCCCccHHHHHHHHHHHCCC-ceee--eCHHHHHHHHHh-CCCCCCCCHHHHHHHHHHhcChhhHHHHHHHHHHHHHH
Confidence 3467999999999999999999 6433 889998887643 21110000000100001111112234457778888888
Q ss_pred ccceeeccCCChhhhhh
Q 026577 93 DYRTFVGTNLNPLWEKF 109 (236)
Q Consensus 93 ~Yr~fv~t~~~p~~~~~ 109 (236)
+|+..+|.|..|
T Consensus 191 -----~C~~~~P~C~~C 202 (226)
T 1orn_A 191 -----HCKAQSPQCPSC 202 (226)
T ss_dssp -----TSCSSCCCGGGC
T ss_pred -----HcCCCCCCCCCC
Confidence 999999988765
No 84
>1pu6_A 3-methyladenine DNA glycosylase; helix-hairpin-helix, base excision repair, hydrolase; HET: KCX; 1.64A {Helicobacter pylori} SCOP: a.96.1.5 PDB: 1pu7_A* 1pu8_A*
Probab=46.07 E-value=2.9 Score=34.82 Aligned_cols=37 Identities=5% Similarity=0.001 Sum_probs=30.1
Q ss_pred ecCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHH
Q 026577 13 LSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDS 52 (236)
Q Consensus 13 ~~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~ 52 (236)
+...||||+.|+++++..+|++ |... ++.+|.++-.+
T Consensus 123 L~~lpGIG~kTA~~il~~a~~~-~~~~--vD~~v~Ri~~r 159 (218)
T 1pu6_A 123 LLDQKGIGKESADAILCYACAK-EVMV--VDKYSYLFLKK 159 (218)
T ss_dssp HHTSTTCCHHHHHHHHHHTTCC-SCCC--CCHHHHHHHHH
T ss_pred HHcCCCcCHHHHHHHHHHHCCC-Cccc--cCHHHHHHHHH
Confidence 3467999999999999999998 6433 78888887653
No 85
>4b21_A Probable DNA-3-methyladenine glycosylase 2; hydrolase-DNA complex, helix-hairpin-helix; HET: BGC 3DR; 1.45A {Schizosaccharomyces pombe} PDB: 4b22_A* 4b23_A* 4b24_A*
Probab=31.98 E-value=7.9 Score=32.53 Aligned_cols=40 Identities=10% Similarity=-0.073 Sum_probs=30.4
Q ss_pred ecCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHHH
Q 026577 13 LSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDSR 53 (236)
Q Consensus 13 ~~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~~ 53 (236)
|...||||+.|+++++.-+|++ |.-.+..+-+|.++..+.
T Consensus 152 L~~l~GIG~~TA~~ill~alg~-pd~fpv~D~~v~r~~~rl 191 (232)
T 4b21_A 152 LSKIKGVKRWTIEMYSIFTLGR-LDIMPADDSTLKNEAKEF 191 (232)
T ss_dssp HTTSTTCCHHHHHHHHHHTSCC-SSCCCTTCHHHHHHHHHH
T ss_pred HHhCCCcCHHHHHHHHHHhCCC-CCeeeCccHHHHHHHHHH
Confidence 4467999999999999999999 532222478888887644
No 86
>3fhg_A Mjogg, N-glycosylase/DNA lyase, DNA-(apurinic; helix-hairpin-helix, 8-oxoguanine, 8-OXOG, DNA damage, DNA repair, glycosidase, hydrolase; 1.90A {Sulfolobus solfataricus}
Probab=23.18 E-value=11 Score=31.00 Aligned_cols=36 Identities=14% Similarity=0.132 Sum_probs=27.7
Q ss_pred cCCCCCCCceeEEEecc-CCCCCCCCCCchhhHHHHHHHHH
Q 026577 14 SCPHGFSPSEVSVVFDE-SYDRVPHPDNNLENSISEIWDSR 53 (236)
Q Consensus 14 ~~~~g~~~~~v~v~~s~-~f~r~p~p~~~~e~~I~~~W~~~ 53 (236)
...||||+.|+++++.- +| . +.+ .++.+|.|+-.+.
T Consensus 120 ~~lpGIG~kTA~~il~~~~~-~-~~~--~vD~~v~Ri~~rl 156 (207)
T 3fhg_A 120 LNIKGIGMQEASHFLRNVGY-F-DLA--IIDRHIIDFMRRI 156 (207)
T ss_dssp TTSTTCCHHHHHHHHHHTTC-C-SSC--CCCHHHHHHHHHT
T ss_pred HcCCCcCHHHHHHHHHHhCC-C-Ccc--eecHHHHHHHHHc
Confidence 36799999999999985 66 3 544 3889998887643
No 87
>3s6i_A DNA-3-methyladenine glycosylase 1; DNA glycosylase, DNA repair, helix-hairpin-helix (HHH), ABAS tetrahydrofuran (THF); HET: 3DR; 2.28A {Schizosaccharomyces pombe}
Probab=20.85 E-value=17 Score=30.32 Aligned_cols=39 Identities=18% Similarity=0.078 Sum_probs=27.9
Q ss_pred ecCCCCCCCceeEEEeccCCCCCCCCCCchhhHHHHHHHH
Q 026577 13 LSCPHGFSPSEVSVVFDESYDRVPHPDNNLENSISEIWDS 52 (236)
Q Consensus 13 ~~~~~g~~~~~v~v~~s~~f~r~p~p~~~~e~~I~~~W~~ 52 (236)
|...+|||+.|+++++..+|++ |.-.+..+-+|.++..+
T Consensus 141 L~~l~GIG~~TA~~ill~~lg~-pd~fpvdD~~v~r~~~~ 179 (228)
T 3s6i_A 141 LTQIKGIGRWTVEMLLIFSLNR-DDVMPADDLSIRNGYRY 179 (228)
T ss_dssp HTTSTTCCHHHHHHHHHHTSCC-SSCCCTTCHHHHHHHHH
T ss_pred HHhCCCcCHHHHHHHHHHhCCC-CCEEecccHHHHHHHHH
Confidence 4467999999999999999999 52222134566666654
Done!