BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026580
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q20390|PPT1_CAEEL Palmitoyl-protein thioesterase 1 OS=Caenorhabditis elegans GN=ppt-1
PE=2 SV=2
Length = 298
Score = 134 bits (338), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 112/201 (55%), Gaps = 26/201 (12%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC-GDHLAPSG- 60
EL GYN +G SQG R V + C PP+KN VS+GG H G P C GD++ +G
Sbjct: 96 ELKNGYNAIGFSQGAQFLRAVAQRCPN-PPMKNLVSVGGQHQGVFGAPYCIGDNIMCNGV 154
Query: 61 --------YLKF-------------PNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 99
YL F PN + +Y ++ FL +NNE N TYK S
Sbjct: 155 RRLIDLGAYLPFVQKRVVQAQYWHDPNQVEEYKKRSIFLADINNEN--NNNPTYKRNLLS 212
Query: 100 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 159
L+NLVL+ F D +++PK+++WFG+Y DG +LP +T LY ED IGLK L ++GR+H
Sbjct: 213 LKNLVLVKFNQDHMVVPKDSSWFGFYKDGDIDTILPMNETDLYKEDRIGLKKLHESGRIH 272
Query: 160 FISVAGGHLKISKADMKKHII 180
F+ V G HL+I ++ + II
Sbjct: 273 FMDVDGDHLQIPRSVLVNDII 293
>sp|Q54CM0|PPT3_DICDI Palmitoyl-protein thioesterase 3 OS=Dictyostelium discoideum
GN=ppt3 PE=3 SV=1
Length = 289
Score = 130 bits (327), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 107/206 (51%), Gaps = 25/206 (12%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG--------- 53
+L+ G+N++G SQG LI R V+ P V N++S GP G P
Sbjct: 86 KLANGFNLIGFSQGTLIARAFVQRY-NNPQVYNYISWNGPQGGQFGTPFVNIPWVDKVLG 144
Query: 54 ---------DHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLV 104
L+ + Y K P+ I KYLE+ FL +NNE K N+TYKE + L +V
Sbjct: 145 TIPYEKTIQKKLSVAEYWKDPHRIDKYLERSIFLADINNEYQVK-NTTYKENLTKLNAMV 203
Query: 105 LIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVA 164
L +DK +IPKE+ WF +Y DG+ + V+P Q+ Y+EDW+GL+TLD++ R+ F +
Sbjct: 204 LTYSTNDKTIIPKESGWFSFYADGSGTEVVPLQQQTQYSEDWLGLRTLDESNRLFFYTTT 263
Query: 165 GGHLKISKADMKK-----HIIPYLKD 185
H D K +PYL++
Sbjct: 264 CTHRDHPIEDYCKPYFTNFTLPYLQN 289
>sp|P45479|PPT1_RAT Palmitoyl-protein thioesterase 1 OS=Rattus norvegicus GN=Ppt1 PE=1
SV=1
Length = 306
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC---------- 52
+L GYN +G SQG R V + C PP+ +S+GG H G +P C
Sbjct: 104 KLQHGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 53 --------------GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 98
+ L + Y P Y FL +N E N +YKE
Sbjct: 163 IRKSLNAGAYSKVVQERLVQAQYWHDPIKEEVYRNCSIFLADINQE--RHINESYKENLM 220
Query: 99 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 158
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYTED +GLK +D AG++
Sbjct: 221 ALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQETTLYTEDRLGLKKMDKAGKL 280
Query: 159 HFISVAGGHLKISKADMKKHIIPYLK 184
F++ G HL+ISK HIIP+LK
Sbjct: 281 VFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|O88531|PPT1_MOUSE Palmitoyl-protein thioesterase 1 OS=Mus musculus GN=Ppt1 PE=2 SV=2
Length = 306
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 27/206 (13%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC---------- 52
+L +GYN +G SQG R V + C PP+ +S+GG H G +P C
Sbjct: 104 KLQQGYNAIGFSQGGQFLRAVAQRCPT-PPMMTLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 53 --------------GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 98
+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKSLNAGAYSKLVQERLVQAQYWHDPIKESVYRNYSIFLADINQE--RCVNESYKKNLM 220
Query: 99 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 158
+L+ V++ F +D ++ P ++ WFG+Y G +P Q++ LYTED +GLK +D AG++
Sbjct: 221 ALKKFVMVKFFNDSIVDPVDSEWFGFYRSGQAKETIPLQESTLYTEDRLGLKKMDKAGKL 280
Query: 159 HFISVAGGHLKISKADMKKHIIPYLK 184
F++ G HL+ISK HIIP+LK
Sbjct: 281 VFLAKEGDHLQISKEWFTAHIIPFLK 306
>sp|P50897|PPT1_HUMAN Palmitoyl-protein thioesterase 1 OS=Homo sapiens GN=PPT1 PE=1 SV=1
Length = 306
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC---------- 52
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 53 --------------GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 98
+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLM 220
Query: 99 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 158
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYT+D +GLK +D+AG++
Sbjct: 221 ALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDNAGQL 280
Query: 159 HFISVAGGHLKISKADMKKHIIPYL 183
F++ G HL++S+ HIIP+L
Sbjct: 281 VFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|Q8HXW6|PPT1_MACFA Palmitoyl-protein thioesterase 1 OS=Macaca fascicularis GN=PPT1
PE=2 SV=1
Length = 306
Score = 115 bits (287), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 27/205 (13%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC---------- 52
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMINLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 53 --------------GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 98
+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYSKVVQERLVQAEYWHDPIKEDVYRNHSIFLADINQE--RGINESYKKNLM 220
Query: 99 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 158
+L+ V++ F +D ++ P ++ WFG+Y G +P Q+T LYT+D +GLK +D+AG++
Sbjct: 221 ALKKFVMVKFLNDSIVDPVDSEWFGFYRSGQAKETIPLQETSLYTQDRLGLKEMDNAGQL 280
Query: 159 HFISVAGGHLKISKADMKKHIIPYL 183
F++ G HL++S+ HIIP+L
Sbjct: 281 VFLATEGDHLQLSEEWFYAHIIPFL 305
>sp|P45478|PPT1_BOVIN Palmitoyl-protein thioesterase 1 OS=Bos taurus GN=PPT1 PE=1 SV=1
Length = 306
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 27/206 (13%)
Query: 3 ELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC---------- 52
+L +GYN +G SQG R V + C PP+ N +S+GG H G +P C
Sbjct: 104 KLQQGYNAMGFSQGGQFLRAVAQRCPS-PPMVNLISVGGQHQGVFGLPRCPGESSHICDF 162
Query: 53 --------------GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFS 98
+ L + Y P Y FL +N E N +YK+
Sbjct: 163 IRKTLNAGAYNKAIQERLVQAEYWHDPIREDIYRNHSIFLADINQE--RGVNESYKKNLM 220
Query: 99 SLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRV 158
+L+ V++ F +D ++ P ++ WFG+Y G +P Q++ LYT+D +GLK +D AG++
Sbjct: 221 ALKKFVMVKFLNDTIVDPVDSEWFGFYRSGQAKETIPLQESTLYTQDRLGLKAMDKAGQL 280
Query: 159 HFISVAGGHLKISKADMKKHIIPYLK 184
F+++ G HL++S+ HIIP+L+
Sbjct: 281 VFLALEGDHLQLSEEWFYAHIIPFLE 306
>sp|Q9W3C7|PPT1_DROME Palmitoyl-protein thioesterase 1 OS=Drosophila melanogaster GN=Ppt1
PE=1 SV=2
Length = 314
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 2 KELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLC--------- 52
+ L++GY+ +G SQG R V E C PP++N ++LGG H G +P+C
Sbjct: 111 EHLAKGYHAIGFSQGGQFLRAVAERCPN-PPMRNLITLGGQHQGIFGLPMCPTLTEKPCD 169
Query: 53 ---------------GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECF 97
L + Y P KY FL +NNEL N Y E
Sbjct: 170 YITRLLDNAAYAPEVQKALVQATYWHDPIMENKYRLGSTFLADINNEL--FINKFYIENL 227
Query: 98 SSLQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGR 157
L+ V++ F +D ++ PKE+ WF YY G + P ++K+Y + +GL + G+
Sbjct: 228 QKLKKFVMVQFLNDTIVQPKESQWFQYYTTGQNKVIQPFTESKVYQD--LGLDKMHRQGQ 285
Query: 158 VHFISVAGGHLKISKADMKKHIIPYLKDQ 186
+ F+ V G HL ISKA ++I+P L ++
Sbjct: 286 LVFLGVEGDHLAISKAWFIQNIVPLLLEK 314
>sp|O59747|PDF1_SCHPO Palmitoyl-protein thioesterase-dolichyl pyrophosphate phosphatase
fusion 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=pdf1 PE=1 SV=2
Length = 622
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 4 LSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCG---------- 53
LS G+ +GLSQG L R + + C+ +++ ++LG PH+G ++P C
Sbjct: 115 LSNGFYALGLSQGGLFLRALAQTCDAAK-IRSLITLGSPHSGINTIPGCSPTNLICKAVV 173
Query: 54 --------------DHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 99
+H+ + Y + KYLE KFL LNNE+ + E
Sbjct: 174 HSILGLGIWHSWIQNHVVQAQYYRTEKQYDKYLENNKFLTHLNNEVLHDNYTRNIEKLKE 233
Query: 100 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 159
L NLV + F+ D ++ P + FG+ + + + LY +GLK L + G++
Sbjct: 234 LDNLVAVSFERDDIVEPPYSTGFGWINETT-GENIEMEDFVLYES--LGLKDLVNQGKLE 290
Query: 160 FISVAGGHLKISKADMKKHIIPYL 183
IS G HL++ D ++ Y
Sbjct: 291 TISFPGRHLQMRWGDFDALVLKYF 314
>sp|Q6GNY7|PPT2B_XENLA Lysosomal thioesterase PPT2-B OS=Xenopus laevis GN=ppt2-b PE=2 SV=1
Length = 288
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 86/181 (47%), Gaps = 24/181 (13%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPLCGDHLAP------- 58
+G +++ SQG LI RG++E V F++L P G + L P
Sbjct: 89 KGVHLICYSQGGLICRGLLETMPEHN-VDTFIALSSPLMGQYGMTLYVQKALPLVNISAL 147
Query: 59 --------------SGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLV 104
GY + P+ KYLE FLPKLNNEL D ++ K F L+ LV
Sbjct: 148 QEVCYRKFFKEISICGYWRDPHRYEKYLEYSAFLPKLNNELLDSNSTERKRNFLRLRKLV 207
Query: 105 LIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVA 164
LI DD+V+ P +++ FG+Y + V+ + +Y +D GL++LD G + SV
Sbjct: 208 LIGGPDDEVIAPWQSSHFGFYNEK--EEVVNMKDQMVYQKDTFGLQSLDGRGAITIYSVP 265
Query: 165 G 165
G
Sbjct: 266 G 266
>sp|Q9VKH6|PPT2_DROME Lysosomal thioesterase PPT2 homolog OS=Drosophila melanogaster
GN=Ppt2 PE=2 SV=1
Length = 288
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAGTASVPL-------------- 51
EG ++G SQG L+ R ++ VK F+SL P AG
Sbjct: 90 EGIIVLGYSQGGLLARAAIQSLPEHN-VKTFISLSSPQAGQYGTSFLHLIFPDLAAKTAF 148
Query: 52 ------CGDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLVL 105
G H + GY P YL+ +FLP +NNE ++++K L LV+
Sbjct: 149 ELFYSRVGQHTSVGGYWNDPQRQDLYLKYSEFLPLINNEKKTSNSTSFKMGMVRLNKLVM 208
Query: 106 IMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAG 165
I +D V+ P +++ FGY+ + V+P + ++T D IG++TL +AG++ I V
Sbjct: 209 IGGPNDDVITPWQSSHFGYFDENM--DVIPFIRRPIFTSDSIGIRTLQEAGKL--IIVVK 264
Query: 166 GHLKISKADMKKHII-----PYL 183
H+ ++ +I PYL
Sbjct: 265 PHVHHLAWHTRRDVIHEVIFPYL 287
>sp|Q6PCJ9|PPT2A_XENLA Lysosomal thioesterase PPT2-A OS=Xenopus laevis GN=ppt2-a PE=2 SV=1
Length = 296
Score = 60.8 bits (146), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 24/181 (13%)
Query: 6 EGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAG-----------------TAS 48
+G +++ SQG LI RG+++ V F+SL P G +
Sbjct: 97 DGVHLLCYSQGGLICRGLLQTMPDHN-VDTFISLSSPQMGQYGDTDYLRYLFPTYVKSNL 155
Query: 49 VPLC----GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLV 104
LC G + + P+ Y+ FL LN+E P+ + +K+ F L+ +V
Sbjct: 156 YRLCYTQMGQTFSICNFWNDPHHHGIYVNVSDFLAPLNSERPEPNATDWKKNFLRLRKMV 215
Query: 105 LIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVA 164
LI DD V+ P E++ FG+Y + VL + +Y +D GL+++D G + V
Sbjct: 216 LIGGPDDGVITPWESSHFGFYDEN--ETVLEMKYQMVYQDDTFGLRSMDYRGAITVYGVP 273
Query: 165 G 165
G
Sbjct: 274 G 274
>sp|Q1JQA0|PPT2_BOVIN Lysosomal thioesterase PPT2 OS=Bos taurus GN=PPT2 PE=2 SV=1
Length = 305
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 24/186 (12%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAG--------------- 45
M + +G +++ SQG L+ R ++ + V +F+SL P G
Sbjct: 101 MAKALQGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTNYLKWLFPTS 159
Query: 46 --TASVPLC----GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 99
+ +C G + Y P+ YL FL +N E + +++ F
Sbjct: 160 MRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFLR 219
Query: 100 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 159
L LVLI DD V+ P ++++FG+Y A VL +K +Y D GLKTL G +
Sbjct: 220 LGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEKQLVYLRDSFGLKTLLARGAIV 277
Query: 160 FISVAG 165
+AG
Sbjct: 278 RCPMAG 283
>sp|O35448|PPT2_MOUSE Lysosomal thioesterase PPT2 OS=Mus musculus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAG--------------- 45
M++ EG +++ SQG L+ R ++ + V +F+SL P G
Sbjct: 98 MEKAPEGVHLICYSQGGLVCRALLSVMDNHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 46 --TASVPLC----GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 99
+ +C G + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRVCYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFLR 216
Query: 100 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 159
+ LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL G +
Sbjct: 217 VGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLARGAIV 274
Query: 160 FISVAG 165
+AG
Sbjct: 275 RCPMAG 280
>sp|O70489|PPT2_RAT Lysosomal thioesterase PPT2 OS=Rattus norvegicus GN=Ppt2 PE=2 SV=1
Length = 302
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAG--------------- 45
M++ EG +++ SQG L+ R ++ + V +F+SL P G
Sbjct: 98 MEKAPEGVHLICYSQGGLVCRALLSVMDEHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 46 --TASVPLC----GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 99
+ +C G + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATAWRKNFLR 216
Query: 100 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 159
+ LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL G +
Sbjct: 217 VGRLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQPVYLRDSFGLKTLLARGAIV 274
Query: 160 FISVAG 165
+AG
Sbjct: 275 RCPMAG 280
>sp|Q9UMR5|PPT2_HUMAN Lysosomal thioesterase PPT2 OS=Homo sapiens GN=PPT2 PE=1 SV=4
Length = 302
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 24/186 (12%)
Query: 1 MKELSEGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFVSLGGPHAG--------------- 45
M + +G +++ SQG L+ R ++ + V +F+SL P G
Sbjct: 98 MAKAPQGVHLICYSQGGLVCRALLSVMDDHN-VDSFISLSSPQMGQYGDTDYLKWLFPTS 156
Query: 46 --TASVPLC----GDHLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 99
+ +C G + Y P+ YL FL +N E + +++ F
Sbjct: 157 MRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVWRKNFLR 216
Query: 100 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 159
+ +LVLI DD V+ P ++++FG+Y A VL ++ +Y D GLKTL G +
Sbjct: 217 VGHLVLIGGPDDGVITPWQSSFFGFY--DANETVLEMEEQLVYLRDSFGLKTLLARGAIV 274
Query: 160 FISVAG 165
+AG
Sbjct: 275 RCPMAG 280
>sp|Q890Y5|UVRC_CLOTE UvrABC system protein C OS=Clostridium tetani (strain Massachusetts
/ E88) GN=uvrC PE=3 SV=1
Length = 622
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 43 HAGTASVPLCGDHLAPSGYLKFPNDIPKYL--EKCKFLPKLNNELPDKRNSTYKECFSSL 100
H S P CG H++ GY NDI + L + L KL N++ + NS E +SL
Sbjct: 171 HIKLCSAP-CGAHISKQGYALIINDIVQLLSGKDKDILDKLKNQMEEASNSLQFEKAASL 229
Query: 101 QNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHF 160
++ + + K + K+ G + + + + +K ++ + GR HF
Sbjct: 230 RDKIFAV----KKITEKQKIIMGSFQNEDYINIAKDEKDSCVQVFFVREGKI--IGREHF 283
Query: 161 I 161
I
Sbjct: 284 I 284
>sp|Q09371|YS42_CAEEL Uncharacterized protein ZK177.2 OS=Caenorhabditis elegans
GN=ZK177.2 PE=4 SV=1
Length = 296
Score = 34.3 bits (77), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 21/113 (18%)
Query: 85 LPDKRNSTYKECFSSLQNLVLIM-FKDDKV-------------LIPKETAWFGYYPDGAF 130
L D R S Y+ C + + LVL M +DK+ + P W Y DG
Sbjct: 153 LADWRTSDYRRCITIMAQLVLAMRIANDKMKFVHGDIYMMNILIAPTTKRWIEYNIDGKT 212
Query: 131 SPV----LPPQKTKLYTEDWIGLK-TLDDAGRVHFISVAGGH-LKISKADMKK 177
+ + PQ +++ W G D R+H ++ GH L SK D KK
Sbjct: 213 ITIQTFGIIPQLID-FSKSWCGADPERHDISRLHTVAKRVGHSLNGSKRDKKK 264
>sp|A1KVS6|AROE_NEIMF Shikimate dehydrogenase OS=Neisseria meningitidis serogroup C /
serotype 2a (strain ATCC 700532 / FAM18) GN=aroE PE=3
SV=1
Length = 269
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 128 GAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH-LKISKADMKKHIIPYLKDQ 186
GA + ++P + KL ++ G+ +D +V I++ G L + + +IP LK+
Sbjct: 86 GAVNTLIPLKNGKLRGDNTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEH 145
Query: 187 ASVRVIESRKTKGPNEE 203
R++ + +T+ EE
Sbjct: 146 RPARIVIANRTRAKAEE 162
>sp|P56992|AROE_NEIMB Shikimate dehydrogenase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=aroE PE=3 SV=1
Length = 269
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 128 GAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH-LKISKADMKKHIIPYLKDQ 186
GA + ++P + KL ++ G+ +D +V I++ G L + + +IP LK+
Sbjct: 86 GAVNTLIPLKNGKLRGDNTDGIGLTNDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEH 145
Query: 187 ASVRVIESRKTKGPNEE 203
R++ + +T+ EE
Sbjct: 146 RPARIVIANRTRAKAEE 162
>sp|B2VG22|MUTS_ERWT9 DNA mismatch repair protein MutS OS=Erwinia tasmaniensis (strain
DSM 17950 / Et1/99) GN=mutS PE=3 SV=1
Length = 853
Score = 33.5 bits (75), Expect = 1.4, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 28/141 (19%)
Query: 65 PNDIPKYLEKCKFLPKLNNELPDKRNSTYKEC------FSSLQNLVL--------IMFKD 110
P D+ + + LP+LNNEL D N+ + F+ L+ L+ ++ +D
Sbjct: 364 PRDLARMRHAFQQLPQLNNELADSDNAHLQTLRSQMGEFTELRELLEHAIVETPPVLVRD 423
Query: 111 DKVLIP---KETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGH 167
V+ P +E + DGA + + ++ + +GL TL +V F V G +
Sbjct: 424 GGVIAPGYNQELDEWRALADGATDYL---DRLEIREREKLGLDTL----KVGFNGVHGYY 476
Query: 168 LKISKADMKKHIIP--YLKDQ 186
+++S+ + H++P Y++ Q
Sbjct: 477 IQVSRG--QSHLVPIHYVRRQ 495
>sp|P28824|NRP1_XENLA Neuropilin-1 OS=Xenopus laevis GN=nrp1 PE=2 SV=1
Length = 928
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 133 VLPPQKTKLYTEDWIGLKTLDDAGRVHFISVAGGHLKISKADMKKHIIPYLKDQASVRVI 192
LPP T YT++W+ + L + V + + GG K +K M+K I Y + +I
Sbjct: 472 ALPPSNTHPYTKEWLQID-LAEEKIVRGVIIQGGKHKENKVFMRKFKIGYSNNGTEWEMI 530
Query: 193 ESRKTKGPNEEEGST 207
P EG+T
Sbjct: 531 MDSSKNKPKTFEGNT 545
>sp|Q6CN95|HAT1_KLULA Histone acetyltransferase type B catalytic subunit OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=HAT1 PE=3 SV=1
Length = 390
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 69/176 (39%), Gaps = 32/176 (18%)
Query: 46 TASVPLCGDHLAPSGY------LKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSS 99
T + P+ GD GY L F + K K+ KLNNE+ D
Sbjct: 34 TFTYPIYGDSEQIFGYKNLQIFLAFDSITFKPFVNVKYDAKLNNEIED------------ 81
Query: 100 LQNLVLIMFKDDKVLIPKETAWFGYYPDGAFSPVLPPQKTKLYTEDWIGLKTLDDAGRVH 159
+Q L+L +D V+I E AW + + L P+K KL E IG D ++
Sbjct: 82 VQKLLLDKLPEDDVIIKDEEAWIKTFTKEQETFAL-PEKDKLVEEYEIG----DQEFVIY 136
Query: 160 FISVAGGHLKISKADMKKHIIPYLKDQASVRVIESRKTKGPNEEEGSTELVFDGSS 215
+S+ +K+ M+ + + IES N+ +VF+ +S
Sbjct: 137 RVSLQDPAIKMLHKRMQIFTLLF---------IESASYIDENDSSWEIFIVFNKNS 183
>sp|P35409|GLHR_ANTEL Probable glycoprotein hormone G-protein coupled receptor
OS=Anthopleura elegantissima PE=2 SV=1
Length = 925
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 55 HLAPSGYLKFPNDIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNL 103
H++ SG + P+DI ++LEK K+L NN++ + K +SSL L
Sbjct: 66 HVSFSGEISIPSDILQHLEKLKYLTLNNNKIKNIAKFRVKNGYSSLITL 114
>sp|O31929|YOPI_BACSU SPBc2 prophage-derived uncharacterized protein YopI OS=Bacillus
subtilis (strain 168) GN=yopI PE=4 SV=1
Length = 177
Score = 32.0 bits (71), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 19/72 (26%)
Query: 67 DIPKYLEKCKFLPKLNNELPDKRNSTYKECFSSLQNLVLIMFKDDKVLIPKETAWFGYYP 126
+IPK L + KF CF NL++ + DDK +E A FGYY
Sbjct: 82 EIPKVLREIKF------------------CFYKNTNLIVSVTPDDKAT-TEEFAEFGYYR 122
Query: 127 DGAFSPVLPPQK 138
D F+ LP ++
Sbjct: 123 DKLFNINLPSKQ 134
>sp|Q9LRQ7|BAHD2_ARATH BAHD acyltransferase At3g29680 OS=Arabidopsis thaliana GN=At3g29680
PE=2 SV=1
Length = 451
Score = 31.6 bits (70), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 159 HFISVAGGHLKISKADMKKHIIPYLKDQASVRVIES 194
HF+ ++G HLK + D K HI+ + KD S+ V+ES
Sbjct: 72 HFLPLSG-HLKWNPQDPKPHIVIFPKDTVSLTVVES 106
>sp|Q3SGC3|RIMM_THIDA Ribosome maturation factor RimM OS=Thiobacillus denitrificans
(strain ATCC 25259) GN=rimM PE=3 SV=1
Length = 189
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 129 AFSPVLPPQKTKLYTEDWIGLKTLD----DAGRVHFISVAGGHLKISKADMKKHIIPYL 183
A S + PP++ + Y D IGL ++ + G+V + +G H + ++H+IP++
Sbjct: 109 AKSALPPPEENEFYWSDLIGLTVMNREGVELGKVDSLMESGAHDLLVVKGRREHLIPFV 167
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,717,956
Number of Sequences: 539616
Number of extensions: 4519227
Number of successful extensions: 9002
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 8949
Number of HSP's gapped (non-prelim): 28
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)