Query 026581
Match_columns 236
No_of_seqs 197 out of 1960
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 16:59:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026581.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026581hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 100.0 1E-35 3.4E-40 283.5 18.6 171 27-207 17-195 (553)
2 1ao0_A Glutamine phosphoribosy 100.0 3.2E-35 1.1E-39 274.4 18.5 191 28-223 14-254 (459)
3 1xff_A D-fructose-6-, glucosam 100.0 1.5E-32 5.1E-37 236.1 20.4 169 28-205 14-225 (240)
4 1ecf_A Glutamine phosphoribosy 100.0 1.8E-31 6E-36 251.7 22.7 193 28-223 14-270 (504)
5 2bpl_A Glucosamine--fructose-6 100.0 9.2E-29 3.2E-33 237.8 19.0 169 27-204 13-224 (608)
6 1jgt_A Beta-lactam synthetase; 100.0 2.3E-28 7.9E-33 230.9 14.6 131 65-207 56-212 (513)
7 1q15_A CARA; CMPR, (2S,5S)-5-c 99.9 2.6E-26 8.8E-31 216.4 8.9 143 52-207 27-207 (503)
8 3mdn_A Glutamine aminotransfer 99.9 5.4E-23 1.9E-27 180.0 13.6 143 53-204 83-257 (274)
9 1te5_A Conserved hypothetical 99.8 1.3E-21 4.5E-26 169.7 2.6 139 53-200 73-252 (257)
10 1ea0_A Glutamate synthase [NAD 99.6 4.5E-15 1.5E-19 151.9 10.8 137 52-197 203-396 (1479)
11 1ofd_A Ferredoxin-dependent gl 99.5 3.3E-14 1.1E-18 145.9 11.1 137 52-197 199-395 (1520)
12 1vk9_A Conserved hypothetical 38.3 8 0.00028 30.1 0.5 26 129-157 27-52 (151)
13 3qqz_A Putative uncharacterize 23.8 3E+02 0.01 22.5 8.2 69 124-197 21-89 (255)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=100.00 E-value=1e-35 Score=283.46 Aligned_cols=171 Identities=23% Similarity=0.437 Sum_probs=151.6
Q ss_pred cchHHHHHHHhHhcCCCCcceEEcCcEEEEEeeC---CCCCCcceEEeeCCcEEEEEeeEEcchhhHHHHhC----C-CC
Q 026581 27 KTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQ---NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG----L-AK 98 (236)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~~~~~la~~~~---~~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~lg----~-~~ 98 (236)
...+..|++.|.|||||+.+++..++++|||+|. +...+.||+.+.+++++++|||+|||+.+|+++|. . +.
T Consensus 17 ~~~~~~m~~~l~hRGpD~~G~~~~~~~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~~eLr~~L~~~~~f~s~ 96 (553)
T 1ct9_A 17 RKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTG 96 (553)
T ss_dssp HHHHHHHHHTTGGGCBTEEEEEECSSEEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTHHHHHHHHTTTSCCCSC
T ss_pred HHHHHHHHHHHhccCCCcccEEEECCEEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECHHHHHHHHhccCccCCC
Confidence 3567789999999999999999998899999993 22368899998788899999999999999999984 2 78
Q ss_pred CCchHHHHHHHHHHHhcCCCCcHHHHhhccccceeEEEEECCCCEEEEEEcCCCCccEEEEEecCCEEEEEeChhhhhhh
Q 026581 99 SANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGA 178 (236)
Q Consensus 99 ~d~e~~~~l~~~~~~g~~g~~~~~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPLyy~~~~dg~~~faSe~~aL~~~ 178 (236)
+|+|++ +++|++|| .+++++|+|+|||++||.++++|+++||++|+|||||+...++.++||||.++|...
T Consensus 97 sDtEvi--l~l~~~~g-------~~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~ 167 (553)
T 1ct9_A 97 SDCEVI--LALYQEKG-------PEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPV 167 (553)
T ss_dssp CTTHHH--HHHHHHHT-------TTTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTT
T ss_pred CcHHHH--HHHHHHHH-------HHHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhh
Confidence 899985 69999998 789999999999999999889999999999999999999535689999999999876
Q ss_pred cCCceEEeCCCeEEEEeCCcEEEEeCCCC
Q 026581 179 CGKSLASFPQGCFFSTAVGGLRSFENPKN 207 (236)
Q Consensus 179 ~~~~i~~lpPG~~~~~~~~~~~~y~~~~~ 207 (236)
+ +.|++||||+++.+++|++++||.+.+
T Consensus 168 ~-~~i~~l~pG~~~~~~~g~~~~yw~~~~ 195 (553)
T 1ct9_A 168 C-RTIKEFPAGSYLWSQDGEIRSYYHRDW 195 (553)
T ss_dssp C-SEEEECCTTEEEETTTCSEEECCCCGG
T ss_pred c-CCEEEECCCeEEEEcCCcEEEeecCCc
Confidence 5 469999999999887778999998864
No 2
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=100.00 E-value=3.2e-35 Score=274.38 Aligned_cols=191 Identities=16% Similarity=0.171 Sum_probs=156.0
Q ss_pred chHHHHHHHhHhcCCCCcceEEc---------------------------CcEEEEEeeC---CC--CCCcceEEe---e
Q 026581 28 TTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTHQ---NE--SPLRQRSFA---V 72 (236)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~la~~~~---~~--~~~~QP~~~---~ 72 (236)
..+..|+..|.|||||+.+++.. ++.+|||+|. +. ..+.||+.. .
T Consensus 14 ~~~~~~l~~L~hRG~D~~Gi~~~~~~~~~~~k~~g~v~~~~~~~~l~~l~g~~~igH~R~at~g~~~~~n~qP~~~~~~~ 93 (459)
T 1ao0_A 14 QITYYGLHSLQHRGQEGAGIVATDGEKLTAHKGQGLITEVFQNGELSKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQN 93 (459)
T ss_dssp HHHHHHHHHTGGGCCSEEEEEEECSSCEEEEEEESCHHHHTTSSCTTTCCBSEEEEEEECCC----CGGGSSSEEEBCTT
T ss_pred HHHHHHHHHHHhcCCCcCCEEEEeCCeEEEEecCCcHhhhcchhhhhccCCCEEEEEEecCCCCCCCccCCCCceeccCC
Confidence 45668999999999999997763 3578999992 11 257899987 4
Q ss_pred CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHHhcCCC-CcHHHHhhccccceeEEEEECCCCEEE
Q 026581 73 KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTLF 145 (236)
Q Consensus 73 ~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~~~l~~~~~~g~~g~-~~~~~~l~~L~G~fa~vi~d~~~~~l~ 145 (236)
+++++++|||+|+|+.+|+++| |+ +.+|||++ +++|.+|+.... +++.+++++|+|+|||++|| .++|+
T Consensus 94 ~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEvi--~~l~~~~~~~~~~~a~~~~~~~l~G~fa~~i~d--~~~l~ 169 (459)
T 1ao0_A 94 NGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVL--AHLIKRSGHFTLKDQIKNSLSMLKGAYAFLIMT--ETEMI 169 (459)
T ss_dssp TCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHHH--HHHHHTCCCSSHHHHHHHHHTTCCEEEEEEEEC--SSEEE
T ss_pred CCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHHH--HHHHHHhccCCHHHHHHHHHHhhccceEEEEEe--CCEEE
Confidence 5789999999999999999988 43 67888885 689988752111 34578999999999999999 47999
Q ss_pred EEEcCCCCccEEEEEecCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEE--EEeCCCCC------CcccCCCcc
Q 026581 146 VASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLR--SFENPKNK------ITAVPAAEE 217 (236)
Q Consensus 146 ~aRD~~G~rPLyy~~~~dg~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~~~--~y~~~~~~------~~~~~r~ds 217 (236)
++||++|+|||||+.. ++.++||||.++|.....+.|+++|||+++.++.++++ +||.+... ..|++|||+
T Consensus 170 ~~RD~~G~rPL~~~~~-~~~~~~ASE~~al~~~~~~~i~~l~pG~~~~i~~~~~~~~~~~~~~~~~~c~feyiyfarp~s 248 (459)
T 1ao0_A 170 VALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDEGMKSERFSMNINRSICSMEYIYFSRPDS 248 (459)
T ss_dssp EEECTTCCSCCEEEEE-TTEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTEEEEEESCSSCCCCEEHHHHHTTSCTTC
T ss_pred EEECCCCCCCeEEEec-CCEEEEEECchHHhcCCCceEEEECCCEEEEEECCceEEEecCCCccccccceeeeeccCCcc
Confidence 9999999999999998 57899999999999876678999999999999888754 57765432 138999999
Q ss_pred eeeCce
Q 026581 218 EIWGAT 223 (236)
Q Consensus 218 ~i~g~~ 223 (236)
.+.|..
T Consensus 249 ~~~~~~ 254 (459)
T 1ao0_A 249 NIDGIN 254 (459)
T ss_dssp EETTEE
T ss_pred hhccHh
Confidence 887754
No 3
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=100.00 E-value=1.5e-32 Score=236.13 Aligned_cols=169 Identities=17% Similarity=0.211 Sum_probs=142.0
Q ss_pred chHHHHHHHhHhcCCCCcceE-Ec---------------------------CcEEEEEeeC---C--CCCCcceEEeeCC
Q 026581 28 TTSTALVDRFLQTNSSAVSVQ-VG---------------------------DNVTLAYTHQ---N--ESPLRQRSFAVKD 74 (236)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~-~~---------------------------~~~~la~~~~---~--~~~~~QP~~~~~~ 74 (236)
..+..|++.|.|||||+.+++ +. +..+|||+|. + ...++||+.+ +
T Consensus 14 ~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~--~ 91 (240)
T 1xff_A 14 EILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS--E 91 (240)
T ss_dssp HHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESCHHHHHHHHHHSCCCCSEEEEEEECCSSSCSSTTTSSCEEE--T
T ss_pred HHHHHHHHHHHhcCCCcCCEEEEecCCcEEEEEcCCcHHHHHhhhhcccCCccEEEEEEeccCCCCCCcccCCCccc--C
Confidence 567789999999999999988 62 4689999992 1 2367899986 7
Q ss_pred cEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHHhcCCC---CcHHHHhhccccceeEEEEECC-CCEE
Q 026581 75 EIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKS-TSTL 144 (236)
Q Consensus 75 ~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~~~l~~~~~~g~~g~---~~~~~~l~~L~G~fa~vi~d~~-~~~l 144 (236)
+++++|||+|||+.+|+++| |+ +.+|+|++ +++|++++..|. +++.+++++|+|+|||++||.+ .++|
T Consensus 92 ~~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi--~~l~~~~~~~g~~~~~ai~~~~~~l~G~fa~~i~d~~~~~~l 169 (240)
T 1xff_A 92 HIVVVHNGIIENHEPLREELKARGYTFVSETDTEVI--AHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDTL 169 (240)
T ss_dssp TEEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHH--HHHHHHHHHTSSCHHHHHHHHGGGCCEEEEEEEEETTCTTCE
T ss_pred CEEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHHHhcCCCHHHHHHHHHHhcccceEEEEEecCCCCEE
Confidence 89999999999999999988 44 78888985 588988763232 3456899999999999999975 5899
Q ss_pred EEEEcCCCCccEEEEEecCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCC
Q 026581 145 FVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENP 205 (236)
Q Consensus 145 ~~aRD~~G~rPLyy~~~~dg~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~~~~y~~~ 205 (236)
+++||+ |||||+.. ++.++||||.++|...+. .+.+||||+++.++.++++.|...
T Consensus 170 ~~~Rd~---~PL~~~~~-~~~~~~aSE~~al~~~~~-~~~~l~pG~~~~i~~~~~~~~~~~ 225 (240)
T 1xff_A 170 LAARSG---SPLVIGLG-MGENFIASDQLALLPVTR-RFIFLEEGDIAEITRRSVNIFDKT 225 (240)
T ss_dssp EEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCS-EEEECCTTCEEEECSSCEEEECTT
T ss_pred EEEECC---CceEEEEe-CCEEEEEECHHHHHhhCC-eEEEECCCEEEEEECCeEEEEeCC
Confidence 999997 99999997 567999999999988876 489999999999988888777653
No 4
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=100.00 E-value=1.8e-31 Score=251.71 Aligned_cols=193 Identities=15% Similarity=0.109 Sum_probs=151.7
Q ss_pred chHHHHHHHhHhcCCCCcceEEc----------------------------CcEEEEEeeC---C--CCCCcceEEee-C
Q 026581 28 TTSTALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTHQ---N--ESPLRQRSFAV-K 73 (236)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~~la~~~~---~--~~~~~QP~~~~-~ 73 (236)
..+..|+..|.|||||+.+++.. ++.+|||+|. + ...++||+... .
T Consensus 14 ~~l~~~l~~LqhRG~D~aGi~~~~~~~~~~~~k~~g~v~~vf~~~~~~~l~g~~~igH~R~sT~G~~~~~n~QP~~~~~~ 93 (504)
T 1ecf_A 14 QSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSP 93 (504)
T ss_dssp HHHHHHHHHTGGGCCSEEEEEEECTTSCEEEEEEESCHHHHCCHHHHHHCCSSEEEEEEECCBTTBCTTSCCSCEEECSS
T ss_pred HHHHHHHHHHHhcCCCcceEEEEcCCCcEEEEecCCchhhhcCccccccCCCCEEEEEEccCcCCCCCccccCCeEeccC
Confidence 46778999999999999998754 2478999992 1 23689999864 3
Q ss_pred CcEEEEEeeEEcchhhHHHHh---C-C---CCCCchHHHHHHHHHHHhcC-CC---------CcHHHHhhccccceeEEE
Q 026581 74 DEIFCLFEGALDNLGSLRQQY---G-L---AKSANEVILVIEAYKALRDR-AP---------YPPNHVVGHLSGYFAFIV 136 (236)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~l---g-~---~~~d~e~~~~l~~~~~~g~~-g~---------~~~~~~l~~L~G~fa~vi 136 (236)
++++++|||+|+|+.+|+++| + . +.+|||++ +++|.++... |. +++.+++++|+|+|||++
T Consensus 94 ~~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEvi--~~l~~~~~~~~g~~~~~~~~~~~a~~~~~~~l~G~fa~v~ 171 (504)
T 1ecf_A 94 YGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEIL--LNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACVA 171 (504)
T ss_dssp SCEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHHH--HHHHHHHHTTCCSSSCCHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CCEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHHH--HHHHHHHHHhccccccccccHHHHHHHhhhhcCccceEEE
Confidence 569999999999999999987 2 2 77888885 5888776321 11 235688999999999999
Q ss_pred EECCCCEEEEEEcCCCCccEEEEEec--C--CEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCc-EEEE--e-CCCCC
Q 026581 137 YDKSTSTLFVASDQFGKVPLYWGITA--D--GHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG-LRSF--E-NPKNK 208 (236)
Q Consensus 137 ~d~~~~~l~~aRD~~G~rPLyy~~~~--d--g~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~-~~~y--~-~~~~~ 208 (236)
|+. .++|+++|||+|+|||||+..+ + +.++||||.++|.....+.+++++||++++++.++ +... . .+.+.
T Consensus 172 ~~~-~~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~ASE~~al~~~~~~~v~~l~PGe~v~i~~~g~~~~~~~~~~~~~~ 250 (504)
T 1ecf_A 172 MII-GHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSN 250 (504)
T ss_dssp EET-TTEEEEEECTTCCSCCEEEEEECSSSCEEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTCCEEEEECSSSCCCC
T ss_pred EEc-CCeEEEEECCCCCCceEEeecccCCCceEEEEEeCchHhhccCccEEEECCCCeEEEEeCCCceecceecCCCCCC
Confidence 985 3589999999999999999972 3 37999999999998877789999999999887655 4432 2 22233
Q ss_pred Cc-----ccCCCcceeeCce
Q 026581 209 IT-----AVPAAEEEIWGAT 223 (236)
Q Consensus 209 ~~-----~~~r~ds~i~g~~ 223 (236)
.. |++|||+.|.+++
T Consensus 251 ~c~fe~iYfarP~s~i~~~~ 270 (504)
T 1ecf_A 251 PCLFEYVYFARPDSFIDKIS 270 (504)
T ss_dssp CBHHHHHTTSCTTCEETTEE
T ss_pred ccEEEEehhcChHHHhhhcc
Confidence 22 8899999999984
No 5
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.96 E-value=9.2e-29 Score=237.79 Aligned_cols=169 Identities=17% Similarity=0.202 Sum_probs=141.3
Q ss_pred cchHHHHHHHhHhcCCCCcceEEc----------------------------CcEEEEEeeC---C--CCCCcceEEeeC
Q 026581 27 KTTSTALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTHQ---N--ESPLRQRSFAVK 73 (236)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~~la~~~~---~--~~~~~QP~~~~~ 73 (236)
...+..|++.|.|||||+.+++.. +..+|||+|. + ...++||+.+
T Consensus 13 ~~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~l~~~l~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~-- 90 (608)
T 2bpl_A 13 AEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS-- 90 (608)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESSHHHHHHHHHHSCCCCSEEEEEEECCCSSSCCGGGCSCEEE--
T ss_pred HHHHHHHHHHHHhcCCCcCceEEEecCCcEEEEeCCCcHHHHHHHhhccCCCCCEEEEEEccCCCCCCCccCCCCccC--
Confidence 356788999999999999998753 3578999992 2 2357899987
Q ss_pred CcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHHhcCCC---CcHHHHhhccccceeEEEEECCC-CE
Q 026581 74 DEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKST-ST 143 (236)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~~~l~~~~~~g~~g~---~~~~~~l~~L~G~fa~vi~d~~~-~~ 143 (236)
++++++|||+|+|+.+|+++| |+ +.+|||++ +++|.+|-..|. +++.+++++|+|+|||++||.++ ++
T Consensus 91 ~~~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEvi--~~l~~~~~~~g~~~~~av~~~~~~l~G~fa~~i~d~~~~~~ 168 (608)
T 2bpl_A 91 EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVI--AHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDT 168 (608)
T ss_dssp TTEEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHHH--HHHHHHHHTTCCCHHHHHHHHGGGCCSSEEEEEEETTCTTC
T ss_pred CCEEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHHH--HHHHHHHHhcCCCHHHHHHHHHHhhcCceEEEEEecCCCCE
Confidence 789999999999999999988 54 77888885 688887732232 35678999999999999999877 89
Q ss_pred EEEEEcCCCCccEEEEEecCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeC
Q 026581 144 LFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFEN 204 (236)
Q Consensus 144 l~~aRD~~G~rPLyy~~~~dg~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~~~~~y~~ 204 (236)
|+++||+ |||||+.. ++.++||||.++|...+. .+.+|+||+++.++.++++.+..
T Consensus 169 l~~aRd~---~PL~~g~~-~~~~~~aSe~~al~~~~~-~~~~l~~G~i~~i~~~~~~~~~~ 224 (608)
T 2bpl_A 169 LLAARSG---SPLVIGLG-MGENFIASDQLALLPVTR-RFIFLEEGDIAEITRRSVNIFDK 224 (608)
T ss_dssp EEEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCC-EEEECCTTCEEEECSSCEEEECS
T ss_pred EEEEECC---CceEEEEe-CCeEEEEechHHHHhcCC-eEEEECCCeEEEEECCeEEEEeC
Confidence 9999996 99999998 567999999999988764 68999999999998888777754
No 6
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.95 E-value=2.3e-28 Score=230.85 Aligned_cols=131 Identities=18% Similarity=0.272 Sum_probs=113.9
Q ss_pred CcceEEeeC----CcEEEEEeeEEcchhhHHHHhCC---CCCCchHHHHHHHHHHHhcCCCCcHHHHhhccccceeEEEE
Q 026581 65 LRQRSFAVK----DEIFCLFEGALDNLGSLRQQYGL---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVY 137 (236)
Q Consensus 65 ~~QP~~~~~----~~~~lv~nG~I~N~~~L~~~lg~---~~~d~e~~~~l~~~~~~g~~g~~~~~~~l~~L~G~fa~vi~ 137 (236)
..||++..+ ++++++|||+|||+.+|+++|++ +.+|+|++ +++|++|| .+++++|+|+|||++|
T Consensus 56 ~~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEvi--l~l~~~~g-------~~~~~~l~G~fA~~i~ 126 (513)
T 1jgt_A 56 VAPDRAVARSLTGAPTTAVLAGEIYNRDELLSVLPAGPAPEGDAELV--LRLLERYD-------LHAFRLVNGRFATVVR 126 (513)
T ss_dssp SCGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHHH--HHHHHHHG-------GGGGGTCCEEEEEEEE
T ss_pred cCCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHHH--HHHHHHHh-------HHhHhhcCeeEEEEEE
Confidence 378887654 78999999999999999999854 67888885 69999998 7899999999999999
Q ss_pred ECCCCEEEEEEcCCCCccEEEEEecCCEEEEEeChhhhhhhc---------------CCceEEeCCCeEEEEe--CCc--
Q 026581 138 DKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGAC---------------GKSLASFPQGCFFSTA--VGG-- 198 (236)
Q Consensus 138 d~~~~~l~~aRD~~G~rPLyy~~~~dg~~~faSe~~aL~~~~---------------~~~i~~lpPG~~~~~~--~~~-- 198 (236)
|.+ +++++||++|+|||||+.. ++.++||||+++|...+ .+.|+.+||||++.++ +++
T Consensus 127 d~~--~l~~aRD~~G~kPLyy~~~-~~~~~faSe~~aL~~~~~~~~~~l~~~~~~t~~~~i~~l~pG~~l~i~~~~g~~~ 203 (513)
T 1jgt_A 127 TGD--RVLLATDHAGSVPLYTCVA-PGEVRASTEAKALAAHRDPKGFPLADARRVAGLTGVYQVPAGAVMDIDLGSGTAV 203 (513)
T ss_dssp ETT--EEEEEECTTCCSCCEEEEE-TTEEEEESCHHHHHTC--CCCCCCTTSEECSSCSSCEECCTTEEEEEETTTTEEE
T ss_pred ECC--EEEEEECCCCCceeEEEEe-CCEEEEcchHHHHHhccCcccccccCCCccccccceEEcCCCcEEEEEcCCCCEE
Confidence 974 4999999999999999988 57899999999998876 2689999999999997 665
Q ss_pred EEEEeCCCC
Q 026581 199 LRSFENPKN 207 (236)
Q Consensus 199 ~~~y~~~~~ 207 (236)
.++||.+..
T Consensus 204 ~~~yw~~~~ 212 (513)
T 1jgt_A 204 THRTWTPGL 212 (513)
T ss_dssp EEECCCCCC
T ss_pred EEeecCCcc
Confidence 578998764
No 7
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.93 E-value=2.6e-26 Score=216.41 Aligned_cols=143 Identities=13% Similarity=0.127 Sum_probs=119.8
Q ss_pred cEEEEEee--CCCCCCcceEEeeCCcEEEEEeeEEcchh---hHHHHhC-C--CCCCchHHHHHHHHHHHhcCCCCcHHH
Q 026581 52 NVTLAYTH--QNESPLRQRSFAVKDEIFCLFEGALDNLG---SLRQQYG-L--AKSANEVILVIEAYKALRDRAPYPPNH 123 (236)
Q Consensus 52 ~~~la~~~--~~~~~~~QP~~~~~~~~~lv~nG~I~N~~---~L~~~lg-~--~~~d~e~~~~l~~~~~~g~~g~~~~~~ 123 (236)
..+|||+| .+...+.||+.+.+++++++ |+|||+. +|+++|. . +.+|+|++ +++|++|| .+
T Consensus 27 ~~~igh~R~~t~~~~~~QP~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEvi--l~l~~~~g-------~~ 95 (503)
T 1q15_A 27 GEALSNGYLFIEQNGHYQKCEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAELL--ALLFTRLG-------AN 95 (503)
T ss_dssp EEEETTEEEEEETTCCEEEEECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHHH--HHHHHHHC-------GG
T ss_pred ceeEeeeeEEEcCCCCCCCcCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHHH--HHHHHHHH-------HH
Confidence 45666666 22357899999877777777 9999999 9999883 2 67888885 69999998 78
Q ss_pred HhhccccceeEEEEECCCCEEEEEEcCCCCccEEEEEecCCE-----------------EEEEeChhhhhhh-------c
Q 026581 124 VVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGH-----------------VAFADDADLLKGA-------C 179 (236)
Q Consensus 124 ~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPLyy~~~~dg~-----------------~~faSe~~aL~~~-------~ 179 (236)
++++|+|+|||++||..++ |+++|||+|+|||||+.. ++. ++||||.++|... .
T Consensus 96 ~l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~~-~~~~~t~~l~l~~~~~~~~~~~faSE~~al~~~~~~~~~T~ 173 (503)
T 1q15_A 96 ALALAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQG-KKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYTP 173 (503)
T ss_dssp GGGGCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEES-SSEEEESCHHHHHHHHCTTSSCBCCHHHHTTCSCCCTTCCS
T ss_pred HHHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEEe-CCceecccccccccccCCcceEEecchHHHHhccCCCCCcc
Confidence 9999999999999998877 999999999999999987 567 9999999999875 1
Q ss_pred CCceEEeCCCeEEEEeCCc------EEEEeCCCC
Q 026581 180 GKSLASFPQGCFFSTAVGG------LRSFENPKN 207 (236)
Q Consensus 180 ~~~i~~lpPG~~~~~~~~~------~~~y~~~~~ 207 (236)
.+.|+++|||+++.++.++ .++||.+..
T Consensus 174 ~~~v~~l~pG~~~~i~~~g~~~~~~~~~yw~~~~ 207 (503)
T 1q15_A 174 VKNAQRLKPGAVHVLTHDSEGYSFVESRTLTTPA 207 (503)
T ss_dssp BTTEEECCSSEEEEEEECTTCCEEEEEEESCCCC
T ss_pred cCCeEEECCCeEEEEeCCCcccccceeeecCCcc
Confidence 4679999999998887654 678998754
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.89 E-value=5.4e-23 Score=180.00 Aligned_cols=143 Identities=13% Similarity=0.084 Sum_probs=108.3
Q ss_pred EEEEEeeC---C--CCCCcceEEeeCCcEEEEEeeEEcchhhHHHHh---C--------CCCCCchHHHHHHHHHHHhcC
Q 026581 53 VTLAYTHQ---N--ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---G--------LAKSANEVILVIEAYKALRDR 116 (236)
Q Consensus 53 ~~la~~~~---~--~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g--------~~~~d~e~~~~l~~~~~~g~~ 116 (236)
.+|||+|. + ...++||+.. ++++++|||+|+|+.+|+++| | .+.+|||++ +++|..++..
T Consensus 83 ~~igHvR~AT~g~~s~~n~qPf~~--g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEvi--~~l~~~~~~~ 158 (274)
T 3mdn_A 83 LFLSHVRASTGSCISRNNCHPFAA--RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVL--FLLALSEGLE 158 (274)
T ss_dssp EEEEEC------------CCCEEE--TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHHH--HHHHHHTTTT
T ss_pred EEEEEEccccCCCCcccCCCCccc--CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHHH--HHHHHHhhhc
Confidence 56889882 1 2368899986 689999999999999999877 3 157788885 5788666532
Q ss_pred CC--CcHHHHhhccccc-----------eeEEEEECCCCEEEEEEcC-CCCccEEEEEecC--CEEEEEeChhhhhhhcC
Q 026581 117 AP--YPPNHVVGHLSGY-----------FAFIVYDKSTSTLFVASDQ-FGKVPLYWGITAD--GHVAFADDADLLKGACG 180 (236)
Q Consensus 117 g~--~~~~~~l~~L~G~-----------fa~vi~d~~~~~l~~aRD~-~G~rPLyy~~~~d--g~~~faSe~~aL~~~~~ 180 (236)
.. +++.+++++|+|. |+|+++|. ++|+++||+ +|++||+|+...+ +.++||||. |...+
T Consensus 159 ~~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d~--~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vASE~--l~~~~- 233 (274)
T 3mdn_A 159 HDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDG--QTLYAARYSSDHIAPSVYYRYSHARQGWAVVSEP--LETDE- 233 (274)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEECS--SCEEEEEEESSSCCCCCEEEEETTTTEEEEESSC--C--CC-
T ss_pred CCHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEcC--CEEEEEECCCCCCCCeEEEEEeCCCCEEEEEecc--cccCC-
Confidence 21 4567899999998 89999984 799999998 9999987777633 689999999 43333
Q ss_pred CceEEeCCCeEEEEeCCcEEEEeC
Q 026581 181 KSLASFPQGCFFSTAVGGLRSFEN 204 (236)
Q Consensus 181 ~~i~~lpPG~~~~~~~~~~~~y~~ 204 (236)
+.|++||||+++++++++++.+.-
T Consensus 234 ~~~~~v~pGeiv~i~~~~v~~~~~ 257 (274)
T 3mdn_A 234 GDWTELRPGRMLTIGAEGAAERDF 257 (274)
T ss_dssp SCCEECCSSEEEEEETTEEEEEEC
T ss_pred ceEEEECcCEEEEEeCCeEEEEEc
Confidence 469999999999999888777654
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=99.82 E-value=1.3e-21 Score=169.69 Aligned_cols=139 Identities=12% Similarity=0.043 Sum_probs=102.2
Q ss_pred EEEEEee----C-CCCCCcceEEee--CCcEEEEEeeEEcchhhHHHHhCC--CCCCchHHHHHHHHHHHhc----CCC-
Q 026581 53 VTLAYTH----Q-NESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQYGL--AKSANEVILVIEAYKALRD----RAP- 118 (236)
Q Consensus 53 ~~la~~~----~-~~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~lg~--~~~d~e~~~~l~~~~~~g~----~g~- 118 (236)
.+|||+| + ....++||+... .++++++|||.|.|+++ +++++. +++|||+++ +++.+... ..+
T Consensus 73 ~~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi~--~li~~~~~~~~~~~~~ 149 (257)
T 1te5_A 73 TVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-KPGFYRPVGETDSEAAF--CDLLNRVRRAFPEPVP 149 (257)
T ss_dssp EEEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHHH--HHHHHHHHHHCSSCCC
T ss_pred EEEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCchh-hhccCCcccCCHHHHHH--HHHHHHHHHhcCCCch
Confidence 5799999 1 123678999865 46799999999999998 766543 788888864 55543221 111
Q ss_pred -CcHHHHhhccc------cceeEEEEECCCCEEEEEEc----------CCCCccEEE-------EE---ecCCEEEEEeC
Q 026581 119 -YPPNHVVGHLS------GYFAFIVYDKSTSTLFVASD----------QFGKVPLYW-------GI---TADGHVAFADD 171 (236)
Q Consensus 119 -~~~~~~l~~L~------G~fa~vi~d~~~~~l~~aRD----------~~G~rPLyy-------~~---~~dg~~~faSe 171 (236)
+++.+++++|. |.|+|++.|. ++|+++|| |+|+|||+. +. ..+..++||||
T Consensus 150 ~~a~~~al~~l~~~~~~~G~~n~~l~~g--~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~i~~g~~~~~~~~~~vvASE 227 (257)
T 1te5_A 150 VEVLLPVLISACDEYRKKGVFNALISDG--DWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATE 227 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTBCCEEEEESS--SCEEEECSSCEEEEEEESSCCCEEEECSSEEEEECCCSSTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEEcC--CEEEEEEcCCceEEeecCCCcccccccccceeecccccCCCCCEEEEEeC
Confidence 34555665555 9999999984 78999999 999999976 31 11246999999
Q ss_pred hhhhhhhcCCceEEeCCCeEEEEeCCcEE
Q 026581 172 ADLLKGACGKSLASFPQGCFFSTAVGGLR 200 (236)
Q Consensus 172 ~~aL~~~~~~~i~~lpPG~~~~~~~~~~~ 200 (236)
. |.. .+.|+++|||++++++++++.
T Consensus 228 ~--l~~--~~~wr~v~pGe~v~i~~~~~~ 252 (257)
T 1te5_A 228 P--LTD--NENWTLQQSGEWVLWWGGEVL 252 (257)
T ss_dssp C--SSS--SSSCEEECTTCEEEEETTEEE
T ss_pred c--cCC--CCCeeEeCCCEEEEEECCEEE
Confidence 5 542 457999999999999888765
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.58 E-value=4.5e-15 Score=151.93 Aligned_cols=137 Identities=16% Similarity=0.181 Sum_probs=102.8
Q ss_pred cEEEEEee-CC----CCCCcceEEeeCCcEEEEEeeEEcchhhHHHHh------------C--------C---CCCCchH
Q 026581 52 NVTLAYTH-QN----ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY------------G--------L---AKSANEV 103 (236)
Q Consensus 52 ~~~la~~~-~~----~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l------------g--------~---~~~d~e~ 103 (236)
..+++|+| +. .-.++||+. +|+|||+|.|+..+++.+ | + +.+|||+
T Consensus 203 ~~aigH~RySTnt~p~w~~AQPf~------~laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDSev 276 (1479)
T 1ea0_A 203 DFAIYHQRYSTNTFPTWPLAQPFR------MLAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDSGS 276 (1479)
T ss_dssp SEEEEEECCCSCSCCCSTTSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHHHH
T ss_pred eEEEeeecccCCCCCCcccCCccE------EEEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcHHH
Confidence 47899999 21 225789974 389999999999988542 1 1 6788888
Q ss_pred HH-HHHHHHHHhcCCC-CcH-------------------------HHHhhccccceeEEEEECCCCEEEEEEcCCCCccE
Q 026581 104 IL-VIEAYKALRDRAP-YPP-------------------------NHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPL 156 (236)
Q Consensus 104 ~~-~l~~~~~~g~~g~-~~~-------------------------~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL 156 (236)
+. +++++.+.|. .. +++ ..+++.++|+||+++.|. +.++++|||+|.|||
T Consensus 277 ld~~lelL~~~g~-~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~dg--~~l~a~~DrnGlRPl 353 (1479)
T 1ea0_A 277 LDTVFEVMVRAGR-TAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTDG--RWVVGGMDRNGLRPM 353 (1479)
T ss_dssp HHHHHHHHHHTTC-CHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECSS--SEEEEECCTTCCSCC
T ss_pred HHHHHHHHHHcCC-CHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEeC--CEEEEEecCCCCcce
Confidence 52 1333333220 00 111 244689999999999874 799999999999999
Q ss_pred EEEEecCCEEEEEeChhhhhhhcCCceE--EeCCCeEEEEeCC
Q 026581 157 YWGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAVG 197 (236)
Q Consensus 157 yy~~~~dg~~~faSe~~aL~~~~~~~i~--~lpPG~~~~~~~~ 197 (236)
.|+.++|+.+++|||..+|...+.+.++ ++.||+++.++..
T Consensus 354 ~~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~ 396 (1479)
T 1ea0_A 354 RYTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVDLQ 396 (1479)
T ss_dssp EEEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEETT
T ss_pred EEEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEEECC
Confidence 9999877789999999999877777677 9999999988653
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.52 E-value=3.3e-14 Score=145.94 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=101.3
Q ss_pred cEEEEEee-CC----CCCCcceEEeeCCcEEEEEeeEEcchhhHH------HH-----------h---C-C---CCCCch
Q 026581 52 NVTLAYTH-QN----ESPLRQRSFAVKDEIFCLFEGALDNLGSLR------QQ-----------Y---G-L---AKSANE 102 (236)
Q Consensus 52 ~~~la~~~-~~----~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~------~~-----------l---g-~---~~~d~e 102 (236)
..+++|+| +. .-.++||+. +|+|||+|.|...++ +. | + . +.+|||
T Consensus 199 ~~aigH~RySTnt~p~w~~AQPf~------~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe 272 (1520)
T 1ofd_A 199 NFAVYHRRFSTNTMPKWPLAQPMR------LLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSY 272 (1520)
T ss_dssp SEEEEEECCCSSSCCCGGGSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHH
T ss_pred eEEEEEccccCCCCCCcccCCchh------eeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHH
Confidence 36889998 21 125689974 389999999887776 21 1 3 2 678888
Q ss_pred HHH-HHHHHHHHhcCCC-CcH---------------------------HHHhhccccceeEEEEECCCCEEEEEEcCCCC
Q 026581 103 VIL-VIEAYKALRDRAP-YPP---------------------------NHVVGHLSGYFAFIVYDKSTSTLFVASDQFGK 153 (236)
Q Consensus 103 ~~~-~l~~~~~~g~~g~-~~~---------------------------~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~ 153 (236)
++. +++++.+.|. .. +++ ..+++.++|+||+++.|. +.++++|||+|.
T Consensus 273 ~ld~~lelL~~~g~-~l~~A~~~liPeaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~dg--~~l~a~~DrnGl 349 (1520)
T 1ofd_A 273 NLDSALELLVRTGR-SPLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSDG--KIVGAGLDRNGL 349 (1520)
T ss_dssp HHHHHHHHHHHTTC-CHHHHHHHHSCCCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEECS--SEEEEEECTTCC
T ss_pred HHHHHHHHHHhcCC-CHHHHHHHhCcchhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEeC--CEEEEEecCCCC
Confidence 853 1344333221 00 111 123688999999999985 799999999999
Q ss_pred ccEEEEEecCCEEEEEeChhhhhhhcCCceE--EeCCCeEEEEeCC
Q 026581 154 VPLYWGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAVG 197 (236)
Q Consensus 154 rPLyy~~~~dg~~~faSe~~aL~~~~~~~i~--~lpPG~~~~~~~~ 197 (236)
|||.|+.++|+.+++|||..+|...+.+.++ ++.||+++.++..
T Consensus 350 RPl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~ 395 (1520)
T 1ofd_A 350 RPARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLA 395 (1520)
T ss_dssp SCCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEEETT
T ss_pred CceEEEEeCCCEEEEEcccccccCcchheeeccCCCCCeEEEEECC
Confidence 9999999976789999999999777777777 9999999988653
No 12
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=38.33 E-value=8 Score=30.12 Aligned_cols=26 Identities=19% Similarity=0.485 Sum_probs=20.7
Q ss_pred ccceeEEEEECCCCEEEEEEcCCCCccEE
Q 026581 129 SGYFAFIVYDKSTSTLFVASDQFGKVPLY 157 (236)
Q Consensus 129 ~G~fa~vi~d~~~~~l~~aRD~~G~rPLy 157 (236)
.|.|++++.+ .+.++-..++ |++|||
T Consensus 27 e~~~ScVv~~--~~~i~ts~~r-Gv~pL~ 52 (151)
T 1vk9_A 27 KKDLSLLAYS--GRSIFESKDS-GLKPVV 52 (151)
T ss_dssp HTTCSEEEES--SSEEEEECCS-TTHHHH
T ss_pred hCCeeEEEec--CCEEEEeCCc-ChHHHH
Confidence 3789999954 4678888775 999998
No 13
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=23.82 E-value=3e+02 Score=22.51 Aligned_cols=69 Identities=10% Similarity=0.167 Sum_probs=43.4
Q ss_pred HhhccccceeEEEEECCCCEEEEEEcCCCCccEEEEEecCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCC
Q 026581 124 VVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVG 197 (236)
Q Consensus 124 ~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPLyy~~~~dg~~~faSe~~aL~~~~~~~i~~lpPG~~~~~~~~ 197 (236)
-+..+.+..+-+.||+..++||++.|. .+-.|..+.++.+.=.-..... ...+.|..++.|.|++..++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~---~~~I~~ld~~g~v~~~i~l~g~--~D~EGIa~~~~g~~~vs~E~ 89 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK---PAAIVEMTTNGDLIRTIPLDFV--KDLETIEYIGDNQFVISDER 89 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET---TEEEEEEETTCCEEEEEECSSC--SSEEEEEECSTTEEEEEETT
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC---CCeEEEEeCCCCEEEEEecCCC--CChHHeEEeCCCEEEEEECC
Confidence 455666779999999888999999996 4555566555543322211111 12245667788888766543
Done!