Query 026586
Match_columns 236
No_of_seqs 127 out of 595
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 17:06:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e50_A Protein SET; histone ch 100.0 3.1E-63 1.1E-67 426.5 16.4 214 1-220 1-222 (225)
2 3fs3_A Nucleosome assembly pro 100.0 3.1E-60 1.1E-64 428.3 19.7 217 12-228 40-299 (359)
3 2ayu_A Nucleosome assembly pro 100.0 2.9E-59 1E-63 431.4 17.6 211 12-222 81-364 (417)
4 3kyp_A Pfnaps, nucleosome asse 100.0 1.1E-58 3.8E-63 390.1 10.9 189 27-222 2-192 (193)
5 2zd7_A VPS75, vacuolar protein 100.0 2.2E-54 7.5E-59 379.6 15.8 195 29-223 10-221 (264)
6 2jo8_A Serine/threonine-protei 94.2 0.11 3.6E-06 33.7 5.3 37 30-66 12-48 (51)
7 2p2u_A HOST-nuclease inhibitor 89.3 0.95 3.3E-05 36.4 6.7 57 20-76 15-71 (171)
8 2zd7_A VPS75, vacuolar protein 60.4 21 0.0007 30.5 6.7 44 21-64 9-52 (264)
9 2fzt_A Hypothetical protein TM 31.0 45 0.0015 23.0 3.2 27 51-77 15-41 (79)
10 3bhp_A UPF0291 protein YNZC; N 30.8 77 0.0026 20.9 4.3 43 20-63 3-45 (60)
11 3vem_A Helicase protein MOM1; 29.4 1.5E+02 0.0053 21.9 6.2 65 20-84 34-106 (115)
12 3jux_A Protein translocase sub 29.1 91 0.0031 30.9 6.3 44 29-72 622-665 (822)
13 2jvd_A UPF0291 protein YNZC; s 28.3 61 0.0021 20.9 3.4 41 20-61 3-43 (54)
14 3vem_A Helicase protein MOM1; 25.7 2.1E+02 0.007 21.3 6.8 39 31-69 64-102 (115)
15 2zqm_A Prefoldin beta subunit 25.5 1.8E+02 0.0062 20.5 6.2 28 18-45 3-30 (117)
16 2fsf_A Preprotein translocase 24.8 1.2E+02 0.004 30.3 6.3 45 28-72 617-661 (853)
17 1nkt_A Preprotein translocase 24.7 1.2E+02 0.0042 30.4 6.4 45 28-72 651-695 (922)
18 2ipc_A Preprotein translocase 23.0 1.4E+02 0.0047 30.3 6.4 45 28-72 732-776 (997)
19 1tf5_A Preprotein translocase 22.8 1.4E+02 0.0048 29.7 6.4 44 29-72 580-623 (844)
20 4afl_A P29ING4, inhibitor of g 22.5 1.1E+02 0.0039 21.6 4.4 31 14-44 11-41 (104)
21 3twe_A Alpha4H; unknown functi 21.6 1E+02 0.0036 16.4 3.5 17 27-43 7-23 (27)
No 1
>2e50_A Protein SET; histone chaperone, inhat, PP2AI, protein binding; HET: TRE; 2.30A {Homo sapiens} SCOP: d.305.1.1
Probab=100.00 E-value=3.1e-63 Score=426.50 Aligned_cols=214 Identities=43% Similarity=0.833 Sum_probs=175.2
Q ss_pred CCCCccccchhhhhc-----ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhccCch
Q 026586 1 MVADKGKKTKVEEEN-----AEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPD 75 (236)
Q Consensus 1 ~~~~~~k~~~~~~e~-----~~~~~~~~~~~i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~IP~ 75 (236)
|++|++||+|+.+++ ....+++++.+|.+|+.||.+++.++.++++|+++|+++|+++++|+|++|++||+|||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~iQ~e~~~l~~e~~~ev~~lE~ky~~~~~Ply~kR~eII~~IP~ 80 (225)
T 2e50_A 1 MSAQAAKVSKKELNSNHDGADETSEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIAKIPN 80 (225)
T ss_dssp CHHHHHHHHHHHTTC-----CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred CCCCcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcccc
Confidence 888999999999864 356789999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhcccCcchHHhhcCcceeEEEEccCCCcceEEEEEecCCCcccCceEEEEEEeeCCCCCeeeeecccc
Q 026586 76 FWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNFSPNPYFEDNKLTKTFTFLDDDGSMKITATSIK 155 (236)
Q Consensus 76 FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ve~~~d~~~~f~l~F~F~~NpyF~N~~L~K~~~~~~~~g~~~~~~t~I~ 155 (236)
||++||+||+.++.+|+++|+++|+||+||+|++.++++.||+|+|+|++||||+|++|||+|++.. +|.+++++|+|+
T Consensus 81 FW~tal~n~~~l~~~i~e~De~iL~~L~dI~v~~~~d~~~gf~i~F~F~~N~yF~N~vLtK~y~~~~-~g~~~s~~t~I~ 159 (225)
T 2e50_A 81 FWVTTFVNHPQVSALLGEEDEEAMHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHMNE-SGDPSSKSTEIK 159 (225)
T ss_dssp HHHHHHHTSHHHHTTCCHHHHHHGGGEEEEEEEECCSSCCCEEEEEEECSCSSBSCSEEEEEEC--------CEEECCCC
T ss_pred HHHHHHhcChhhhhhccHhHHHHHHhcCeeEEEEccCCCCceEEEEEeCCCCCccCCEEEEEEEecC-CCCcccCCCcce
Confidence 9999999999999999999999999999999999988789999999999999999999999999998 888889999999
Q ss_pred ccCCCCCCCcccccc--CCCCcc-ccccccccccccCCCCCccCCchHHHHHHHhhccccchhhhhcc
Q 026586 156 WKEGMGIPNGVNHEK--KGNKRP-LAEESFFTWFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYFNN 220 (236)
Q Consensus 156 Wk~gk~lt~~~~~~k--~~~~~~-~~~~SFF~fF~~~~~~~~~~~~d~ei~~~i~~~i~p~al~yy~~ 220 (236)
||+|+++|++...++ +|++|. .+..|||+||+++..+ .+++||++|+++|||+||+||+.
T Consensus 160 Wk~gkd~t~~~~~kk~~~~~~r~~~~~~SFF~fF~~~~~~-----~~~eige~ikd~i~P~av~yy~~ 222 (225)
T 2e50_A 160 WKSGKDMTKRSSQTQNKASRKRQHEEPESFFTWFTDHSDA-----GADELGEVIKDDIWPNPLQYYLV 222 (225)
T ss_dssp BCSSCCC----------------------CGGGGC-----------CHHHHHHHHHTTTTCSHHHHCC
T ss_pred ecCCCCccchhhhhcccccCcccCCCCCCcceecCCCCCC-----chhHHHHHHHhCccccHHHHhcC
Confidence 999999998865443 344444 3468999999998765 35899999999999999999985
No 2
>3fs3_A Nucleosome assembly protein 1, putative; protein localization, histone recognition, structural analysis, CHA; 2.30A {Plasmodium falciparum} PDB: 3hfd_A 3gyw_A 3gyv_A
Probab=100.00 E-value=3.1e-60 Score=428.33 Aligned_cols=217 Identities=26% Similarity=0.486 Sum_probs=171.5
Q ss_pred hhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhc----------cCchhHHHHH
Q 026586 12 EEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIK----------SIPDFWLTAF 81 (236)
Q Consensus 12 ~~e~~~~~~~~~~~~i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~----------~IP~FW~~vl 81 (236)
+.+++..||++|+++|.+|+.||.+++.++.++++++++|++||+++++|+|++|++||+ +||+||++||
T Consensus 40 ~~~~m~sLp~~v~~rI~aLk~lQ~E~~~le~ef~eEv~~LE~KY~kl~qPLyeKR~eII~G~~e~e~~~kgIP~FWltvl 119 (359)
T 3fs3_A 40 YDDKMTDLTEEQKETLKKLKLYQKEYYDYESKFEYELFLLRQKYHDLYGPIYDKRREALVGNGEAKIGTPNLPEFWLRAL 119 (359)
T ss_dssp -----CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSSSTTSTTHHHHHH
T ss_pred hhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCccccccccCCCCcHHHHHH
Confidence 568899999999999999999999999999999999999999999999999999999999 8999999999
Q ss_pred hhhhhhhcccCcchHHhhcCcceeEEEEcc---CCCcceEEEEEecCCCcccCceEEEEEEeeCC--CCCe---eeeecc
Q 026586 82 ISHPALGELLSEEDQKIFRYLSSLEVEDFK---DVKSGYSITFNFSPNPYFEDNKLTKTFTFLDD--DGSM---KITATS 153 (236)
Q Consensus 82 ~n~~~l~~~i~~~D~~iL~~L~dI~ve~~~---d~~~~f~l~F~F~~NpyF~N~~L~K~~~~~~~--~g~~---~~~~t~ 153 (236)
+||+.++.+|+++|+++|+||+||+|+++. +.+.||+|+|+|++||||+|++|+|+|++... +|.+ .+++|+
T Consensus 120 ~Nhp~ls~~I~e~De~iL~yL~DI~Ve~l~~~~~~~~gfkI~F~F~eNpYF~N~vLtKey~l~~~~~~~dp~~~~se~t~ 199 (359)
T 3fs3_A 120 RNNNTVSHVIEDHDEEILVYLNDIRCDYIKKNKEKKEGFILSFYFATNPFFSNSVLTKTYHMKCVDCDNEPVLLHTEATV 199 (359)
T ss_dssp HTSHHHHTTCCHHHHHHHTTEEEEEEEECC-------CEEEEEEECSCSSBCCSEEEEEEEEC--------CEEEEEECC
T ss_pred HhchHHHHhccHhHHHHHhhcceeEEEEeccCCCCCCceEEEEEeCCCCcccCCEEEEEEEEeccCCCCCcccccceeee
Confidence 999999999999999999999999999863 55799999999999999999999999999852 2322 469999
Q ss_pred ccccCCCCCCCccccccCCCC-----c----cccccccccccccCCCCCccC----------------CchHHHHHHHhh
Q 026586 154 IKWKEGMGIPNGVNHEKKGNK-----R----PLAEESFFTWFSDTQEKDTID----------------GIQDEVAEIIKE 208 (236)
Q Consensus 154 I~Wk~gk~lt~~~~~~k~~~~-----~----~~~~~SFF~fF~~~~~~~~~~----------------~~d~ei~~~i~~ 208 (236)
|+||+||++|++..++|++++ | ..+..|||+||+++.++...+ +.|++||++|++
T Consensus 200 I~WK~GKdlT~k~~~kKqr~K~t~~~R~v~k~~~~eSFFnfFspp~~p~~de~~~~de~~~~~~e~~l~~DfeIGe~Ikd 279 (359)
T 3fs3_A 200 IDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFTSHKVPNSNVIKQLSKHEVAQLEMIIEGDYEVALTIKE 279 (359)
T ss_dssp CCBCTTCCTTCC----------------------CCCGGGGSCCBCC------------CHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEeCCCccchhhhhhhccccCCCCceeeeccCCCCCceeeCCCCCCCCcccccccchhhhHHHHHHHHHhHHHHHHHHh
Confidence 999999999988765443322 2 246799999999998764321 137899999999
Q ss_pred ccccchhhhhccCCCccccc
Q 026586 209 DLWPNPLTYFNNEADEEEFE 228 (236)
Q Consensus 209 ~i~p~al~yy~~~~~~~~~~ 228 (236)
+|||+||.||+|++.+++++
T Consensus 280 ~IiP~av~yftGea~e~e~~ 299 (359)
T 3fs3_A 280 RIIPYAVDYYLGIIIESESN 299 (359)
T ss_dssp THHHHHHHHHTTCC------
T ss_pred ceecChHHhhCCcccccccC
Confidence 99999999999998776655
No 3
>2ayu_A Nucleosome assembly protein; histone chaperone; 3.00A {Saccharomyces cerevisiae} SCOP: d.305.1.1 PDB: 2z2r_A
Probab=100.00 E-value=2.9e-59 Score=431.37 Aligned_cols=211 Identities=27% Similarity=0.574 Sum_probs=186.2
Q ss_pred hhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhh---------------------
Q 026586 12 EEENAEQIDSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDII--------------------- 70 (236)
Q Consensus 12 ~~e~~~~~~~~~~~~i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI--------------------- 70 (236)
+.+++..||++|+++|.+|+.||.++.+|+.+|++++++|+++|.++++|||++|++||
T Consensus 81 ~~~~i~sLp~~v~~rI~aLk~lQ~e~~~le~ef~~ev~eLE~Ky~~~~~PLy~KR~eII~G~~ept~eE~~~~~~~~~~~ 160 (417)
T 2ayu_A 81 DSGYVGGLPKNVKEKLLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQEIVESL 160 (417)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHT
T ss_pred ccchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCchhhhcccccccchh
Confidence 34688999999999999999999999999999999999999999999999999999998
Q ss_pred ----------------------ccCchhHHHHHhhhhhhhcccCcchHHhhcCcceeEEEEccCCCcceEEEEEe--cCC
Q 026586 71 ----------------------KSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVEDFKDVKSGYSITFNF--SPN 126 (236)
Q Consensus 71 ----------------------~~IP~FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ve~~~d~~~~f~l~F~F--~~N 126 (236)
+|||+||++||+||+.|+.+|+++|++||+||+||+|++..+++.||+|+|+| .+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~kgIP~FWltalkN~~~lse~I~e~De~iLk~L~DI~Ve~~~d~~~gF~L~F~F~~~~N 240 (417)
T 2ayu_A 161 NETELLVDEEEKAQNDSEEEQVKGIPSFWLTALENLPIVCDTITDRDAEVLEYLQDIGLEYLTDGRPGFKLLFRFDSSAN 240 (417)
T ss_dssp TCGGGCCSSCC---------CCSSCTTHHHHHHHTSTTGGGTCCHHHHTGGGGEEEEECCBCCSSSCEEEEEEEECTTTC
T ss_pred hhhhhhhhhhhhcccccccccccCCccHHHHHHHcChHHHHhhhhhhHHHHhhccceEEEEccCCCcceEEEEEeCCCCC
Confidence 58999999999999999999999999999999999999988778899999999 999
Q ss_pred CcccCceEEEEEEeeCC---CCCe---eeeeccccccC-CCCCCCccccccCCC-----Ccc----ccccccccccccCC
Q 026586 127 PYFEDNKLTKTFTFLDD---DGSM---KITATSIKWKE-GMGIPNGVNHEKKGN-----KRP----LAEESFFTWFSDTQ 190 (236)
Q Consensus 127 pyF~N~~L~K~~~~~~~---~g~~---~~~~t~I~Wk~-gk~lt~~~~~~k~~~-----~~~----~~~~SFF~fF~~~~ 190 (236)
|||+|++|||+|++... +|+. .++||+|+||+ |+|||++..++|+++ .|+ ++..|||+||+++.
T Consensus 241 pYF~N~vLtKtY~~~~e~~~~g~~~~~~~egt~I~WK~~GknlT~k~~kkKqr~K~~~~~R~v~k~v~~~SFFnfFspp~ 320 (417)
T 2ayu_A 241 PFFTNDILCKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIESFFNFFDPPK 320 (417)
T ss_dssp SSBCCSEEEEEEEEESSCCSSSSCEEEEEEECCCCBSCTTTCTTEEEEECCC---------CCEEEEECCCGGGGGSCSC
T ss_pred ccccCCeEEEEEEEeccCCCCCCcccccccCcceeeecCCCCcchhhhhhcccccCCCcccccccCCCCCCceeecCCCC
Confidence 99999999999999863 2553 36899999999 999999876654332 232 45789999999988
Q ss_pred CCCcc-C-----------CchHHHHHHHhhccccchhhhhccCC
Q 026586 191 EKDTI-D-----------GIQDEVAEIIKEDLWPNPLTYFNNEA 222 (236)
Q Consensus 191 ~~~~~-~-----------~~d~ei~~~i~~~i~p~al~yy~~~~ 222 (236)
.++.. + +.|++||++|+++|||+||.||+|++
T Consensus 321 ~p~~dede~~~ee~e~~l~~DfeIG~~Ikd~IiP~AV~yftGea 364 (417)
T 2ayu_A 321 IQNEDQDEELEEDLEERLALDYSIGEQLKDKLIPRAVDWFTGAA 364 (417)
T ss_dssp SCCCTTSSSTTHHHHHHHHHHHHHHHHHHHTTTTTHHHHHHSHH
T ss_pred CCCccccccchHHHHHHHHHHHHHHHHHHhhccccHHHHhcccc
Confidence 76542 1 13679999999999999999999974
No 4
>3kyp_A Pfnaps, nucleosome assembly protein; histone recognition, chaperone; 2.80A {Plasmodium falciparum}
Probab=100.00 E-value=1.1e-58 Score=390.08 Aligned_cols=189 Identities=30% Similarity=0.658 Sum_probs=159.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhccCchhHHHHHhhhhhhhcccCcchHHhhcCcceeE
Q 026586 27 IEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLE 106 (236)
Q Consensus 27 i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~IP~FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ 106 (236)
+.+|++||.+++.+++++++++++|++||+++++|+|++|++||++||+||++||+|||.++.++ +.|+++|+||+||+
T Consensus 2 ~~~L~~iQ~e~~~l~~~~~~e~~~le~ky~~~~~p~y~kR~~iI~~IP~FW~t~l~n~~~ls~i~-~~De~~L~~L~di~ 80 (193)
T 3kyp_A 2 MQDFEDIQKDIEQLDIKCAHEQMNIQKQYDEKKKPLFEKRDEIIQKIPGFWANTLRKHPALSDIV-PEDIDILNHLVKLD 80 (193)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTHHHHTTSSSSTTSS-CHHHHTTCCCCEEC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHhcCCccHHHHHHHcCchHHHHH-HhhHHHHcCcceEE
Confidence 46899999999999999999999999999999999999999999999999999999999999865 79999999999999
Q ss_pred EEEccCCCcceEEEEEecC--CCcccCceEEEEEEeeCCCCCeeeeeccccccCCCCCCCccccccCCCCcccccccccc
Q 026586 107 VEDFKDVKSGYSITFNFSP--NPYFEDNKLTKTFTFLDDDGSMKITATSIKWKEGMGIPNGVNHEKKGNKRPLAEESFFT 184 (236)
Q Consensus 107 ve~~~d~~~~f~l~F~F~~--NpyF~N~~L~K~~~~~~~~g~~~~~~t~I~Wk~gk~lt~~~~~~k~~~~~~~~~~SFF~ 184 (236)
|++..+++.||+|+|+|++ ||||+|++|+|+|++.. +|+.++++|+|+||+|+|+|++..++++..++..+..|||+
T Consensus 81 v~~~~~~~~gf~i~F~F~~n~N~yF~N~vLtK~y~~~~-~g~~~~~~t~I~Wk~gk~~t~~~~~kr~~~~~~~~~~SFF~ 159 (193)
T 3kyp_A 81 LKDNMDNNGSYKITFIFGEKAKEFMEPLTLVKHVTFDN-NQEKVVECTRIKWKEGKNPIAAVTHNRSDLDNEIPKWSIFE 159 (193)
T ss_dssp CBCCSSSSCCCEEEEECSCCSSCSCSCEEEECCCCCC-----CCCCCCCCCCCSSCCCCC--------------CCCTTT
T ss_pred EEEccCCCCceEEEEEEcCCCCccccCceEEEEEEEcC-CCCeeeccceeeeecCCCcchhhhhccccccccCCcchHhh
Confidence 9988777899999999998 89999999999999998 78888899999999999999765444433333457799999
Q ss_pred ccccCCCCCccCCchHHHHHHHhhccccchhhhhccCC
Q 026586 185 WFSDTQEKDTIDGIQDEVAEIIKEDLWPNPLTYFNNEA 222 (236)
Q Consensus 185 fF~~~~~~~~~~~~d~ei~~~i~~~i~p~al~yy~~~~ 222 (236)
||+++..+ .+++||++|+++||||||+||+|++
T Consensus 160 wF~~~~~~-----~~~eige~ikd~i~P~~l~yy~ge~ 192 (193)
T 3kyp_A 160 WFTTDELQ-----DKPDVGELIRREIWHNPLSYYLGLE 192 (193)
T ss_dssp TCCSSCCT-----TTTCTTHHHHTTTTTCHHHHHC---
T ss_pred hcCCCCcC-----CchHHHHHHHhCeeeCHHHHhCCCC
Confidence 99998765 4688999999999999999999974
No 5
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=100.00 E-value=2.2e-54 Score=379.55 Aligned_cols=195 Identities=24% Similarity=0.401 Sum_probs=161.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhccCchhHHHHHhhhhhhhcccCcchHHhhcCcceeEEE
Q 026586 29 KLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISHPALGELLSEEDQKIFRYLSSLEVE 108 (236)
Q Consensus 29 ~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~IP~FW~~vl~n~~~l~~~i~~~D~~iL~~L~dI~ve 108 (236)
+|..++.++..++.++.++.++++++|.++++|+|++|++||+|||+||++||+||+.|+.+|+++|++||+||+||+|+
T Consensus 10 ~l~~~~~~l~~lq~e~~~~~~ele~ky~~~~~Ply~kR~eII~~IP~FWltal~n~~~l~~~I~e~De~iL~~L~dI~v~ 89 (264)
T 2zd7_A 10 EHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYIDEIAEFWKIVLSQHVSFANYIRASDFKYIDTIDKIKVE 89 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHSTTGGGGSCGGGHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcchhHHHHHHHcChHHHhhcCHhhHHHHHhcCceEEE
Confidence 45556666677777777777889999999999999999999999999999999999999999999999999999999999
Q ss_pred Ec-----cCCCcceEEEEEecC-CCcccCceEEEEEEeeCC-CC--C--eeeeeccccccCCCCC-CCccccccC---CC
Q 026586 109 DF-----KDVKSGYSITFNFSP-NPYFEDNKLTKTFTFLDD-DG--S--MKITATSIKWKEGMGI-PNGVNHEKK---GN 173 (236)
Q Consensus 109 ~~-----~d~~~~f~l~F~F~~-NpyF~N~~L~K~~~~~~~-~g--~--~~~~~t~I~Wk~gk~l-t~~~~~~k~---~~ 173 (236)
++ .+.++||+|+|+|++ ||||+|++|||+|++... +| + .++++|+|+||+|+++ +.+...+|+ |+
T Consensus 90 ~~~~~~~~~~~~gf~i~F~F~~~NpyF~N~vLtK~y~~~~~~dg~~~~~~~s~~t~I~WK~g~~~~~~~~~~kk~~~~~~ 169 (264)
T 2zd7_A 90 WLALESEMYDTRDFSITFHFHGIEGDFKEQQVTKVFQIKKGKDDQEDGILTSEPVPIEWPQSYDSINPDLIKDKRSPEGK 169 (264)
T ss_dssp EGGGTCTTSCTTCEEEEEEECCBTTTBCCEEEEEEEEEECCSSSCCCCEEEECCCCCCCCGGGGGGCTTTCSCSSSHHHH
T ss_pred EecccccCCCCCceEEEEEeCCCCCCccCCeEEEEEEecccCCCCCCCceeEeecccccCCCccccchhhhhhccccccc
Confidence 96 566899999999999 999999999999999873 13 3 7789999999997654 444333221 11
Q ss_pred Cc-cccccccccccccCCCCCcc-CCchHHHHHHHhhccccchhhhhccCCC
Q 026586 174 KR-PLAEESFFTWFSDTQEKDTI-DGIQDEVAEIIKEDLWPNPLTYFNNEAD 223 (236)
Q Consensus 174 ~~-~~~~~SFF~fF~~~~~~~~~-~~~d~ei~~~i~~~i~p~al~yy~~~~~ 223 (236)
++ .....|||+||+++..++.. ...+++||++|+++||||||+||+|++.
T Consensus 170 ~~~r~~~~SFF~fF~~~~~~~~~~~~~d~eig~~Ikd~I~P~al~yf~g~~~ 221 (264)
T 2zd7_A 170 KKYRQGMKTIFGWFRWTGLKPGKEFPHGDSLASLFSEEIYPFCVKYYAEAQR 221 (264)
T ss_dssp HHHHHHHTSHHHHTTCCSSSTTSSSTTHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cccCCCCCCcceecCCCCCCccccccCchhHHHHHHhhhccCHHHHhccccc
Confidence 11 13457999999998765432 2368999999999999999999998633
No 6
>2jo8_A Serine/threonine-protein kinase 4; C-terminal domain, human mammalian sterIle 20-like kinase 1, dimer, transferase; NMR {Homo sapiens}
Probab=94.23 E-value=0.11 Score=33.74 Aligned_cols=37 Identities=24% Similarity=0.510 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhh
Q 026586 30 LQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKR 66 (236)
Q Consensus 30 L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR 66 (236)
+..|+..+..++.++++|+-++.+.|..+++|+.+.-
T Consensus 12 ~eEL~~rl~~Ld~~Me~Ei~elr~RY~~KRqPIldAi 48 (51)
T 2jo8_A 12 VEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAI 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHHHHHhHhhHHHHH
Confidence 4557788889999999999999999999999998753
No 7
>2p2u_A HOST-nuclease inhibitor protein GAM, putative; structural genomics, unknown function, PSI-2, protein structure initiative; 2.75A {Desulfovibrio vulgaris} SCOP: h.4.18.1
Probab=89.25 E-value=0.95 Score=36.39 Aligned_cols=57 Identities=12% Similarity=0.289 Sum_probs=51.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhccCchh
Q 026586 20 DSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDF 76 (236)
Q Consensus 20 ~~~~~~~i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~IP~F 76 (236)
-.++-.++..+..++.++..++..+..++.++...|.....|+-.+...+-.+|-.|
T Consensus 15 ~~~~~~alr~ia~l~r~~~~i~~~~n~eI~~ik~~~~~~~~~l~~~i~~l~~~l~~y 71 (171)
T 2p2u_A 15 IRQAEGALAEIATIDRKVGEIEAQMNEAIDAAKARASQKSAPLLARRKELEDGVATF 71 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999999999999999999999999999998888877777666
No 8
>2zd7_A VPS75, vacuolar protein sorting-associated protein 75; histone chaperone, VPS75, NAP1, nucleus, phosphoprotein; 1.85A {Saccharomyces cerevisiae} PDB: 3q66_A* 3q68_A* 3c9d_A 3c9b_A 3q33_B* 3q35_B* 3dm7_A
Probab=60.37 E-value=21 Score=30.47 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHH
Q 026586 21 SELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYD 64 (236)
Q Consensus 21 ~~~~~~i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~ 64 (236)
.+++.++.+|..||.++..++.++.++..++.+-...+++.+..
T Consensus 9 ~~l~~~~~~l~~lq~e~~~~~~ele~ky~~~~~Ply~kR~eII~ 52 (264)
T 2zd7_A 9 NEHAKAFLGLAKCEEEVDAIEREVELYRLNKMKPVYEKRDAYID 52 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh
Confidence 45789999999999999999999999998888877766665554
No 9
>2fzt_A Hypothetical protein TM0693; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.05A {Thermotoga maritima} SCOP: a.46.3.1 PDB: 2g42_A
Probab=30.99 E-value=45 Score=23.02 Aligned_cols=27 Identities=19% Similarity=0.359 Sum_probs=19.9
Q ss_pred HHHHHHHhhchhHHhhhhhhccCchhH
Q 026586 51 VEQKYSEIRKPVYDKRNDIIKSIPDFW 77 (236)
Q Consensus 51 le~k~~~~~~Pl~~kR~eiI~~IP~FW 77 (236)
+++.-.....-++.+|.++++++|.==
T Consensus 15 IE~edyE~L~~LL~kREkLlk~L~~e~ 41 (79)
T 2fzt_A 15 IEKEDYETLLSLLNKRKELMEGLPKDK 41 (79)
T ss_dssp HHHTCHHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHhhCcHHH
Confidence 555555667778889999998887543
No 10
>3bhp_A UPF0291 protein YNZC; NESG, SR384, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.01A {Bacillus subtilis}
Probab=30.80 E-value=77 Score=20.86 Aligned_cols=43 Identities=16% Similarity=0.195 Sum_probs=30.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhH
Q 026586 20 DSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVY 63 (236)
Q Consensus 20 ~~~~~~~i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~ 63 (236)
+.+...+|..|...++. ..|-.+-..|..+|++.|-+.++--+
T Consensus 3 ~~~~i~RINeLakK~K~-~gLT~eEk~EQ~~LR~eYl~~fR~~~ 45 (60)
T 3bhp_A 3 SNAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGFRSSM 45 (60)
T ss_dssp CHHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999988877 44555556677888888876665433
No 11
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=29.40 E-value=1.5e+02 Score=21.94 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhccCchhHHHHHhhh
Q 026586 20 DSELVLSIEKLQEIQDEL--------EKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKSIPDFWLTAFISH 84 (236)
Q Consensus 20 ~~~~~~~i~~L~~lQ~e~--------~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~IP~FW~~vl~n~ 84 (236)
++.+..-++.|...+..+ ..|..++.+|+-++.+||..+.+-+-..=..--+++...-..|+.|.
T Consensus 34 sDPL~~ELeRLr~~~d~~~K~HE~kklqLkse~e~E~ae~k~KYD~~lqe~ese~~~kkK~le~~~~kV~mNk 106 (115)
T 3vem_A 34 NDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRKFHEVEAEHNTRTTKIEKDKNLVIMNK 106 (115)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555554444333 34455678888888888887776542111111133444455666663
No 12
>3jux_A Protein translocase subunit SECA; protein translocation, ATPase, conformational change, peptide binding, ATP-binding, cell inner membrane; HET: ADP; 3.10A {Thermotoga maritima} PDB: 3din_A*
Probab=29.06 E-value=91 Score=30.88 Aligned_cols=44 Identities=25% Similarity=0.470 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhcc
Q 026586 29 KLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (236)
Q Consensus 29 ~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~ 72 (236)
++...|++.+..+-...+.+++...--+.+++-+|.+|++++.+
T Consensus 622 ~ie~AQkkvE~~nf~~Rk~ll~yDdv~n~QR~~iY~~R~~iL~~ 665 (822)
T 3jux_A 622 LIENIQKKVEGINFSIRKTLMEMDDVLDKQRRAVYSLRDQILLE 665 (822)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46667999999999999999999999999999999999999975
No 13
>2jvd_A UPF0291 protein YNZC; solution structure, construct optimization, cytoplasm, structural genomics, unknown function, PSI-2; NMR {Bacillus subtilis}
Probab=28.31 E-value=61 Score=20.90 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhch
Q 026586 20 DSELVLSIEKLQEIQDELEKINEEASEKVLEVEQKYSEIRKP 61 (236)
Q Consensus 20 ~~~~~~~i~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~P 61 (236)
+.+...+|..|...++. ..|-.+-..|..+|++.|-+.++-
T Consensus 3 ~~~~i~RINeLakK~K~-~gLT~eEk~EQ~~LR~eYl~~fR~ 43 (54)
T 2jvd_A 3 SNAKIARINELAAKAKA-GVITEEEKAEQQKLRQEYLKGFRS 43 (54)
T ss_dssp CHHHHHHHHHHHHHHHH-TCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred cHHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45667899999988876 445555556777888888766553
No 14
>3vem_A Helicase protein MOM1; coiled-coil, hendecad, transcriptional gene silencing, siRNA nucleus, chromatin, transcription; 3.20A {Arabidopsis thaliana}
Probab=25.75 E-value=2.1e+02 Score=21.27 Aligned_cols=39 Identities=18% Similarity=0.289 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhh
Q 026586 31 QEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDI 69 (236)
Q Consensus 31 ~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~ei 69 (236)
.++.+|+.++..++...+.+++..|..+.+-+-..++.+
T Consensus 64 se~e~E~ae~k~KYD~~lqe~ese~~~kkK~le~~~~kV 102 (115)
T 3vem_A 64 AELERKMAEVQAEFRRKFHEVEAEHNTRTTKIEKDKNLV 102 (115)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346677777777777777777777776665555554443
No 15
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=25.46 E-value=1.8e+02 Score=20.55 Aligned_cols=28 Identities=14% Similarity=0.305 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026586 18 QIDSELVLSIEKLQEIQDELEKINEEAS 45 (236)
Q Consensus 18 ~~~~~~~~~i~~L~~lQ~e~~~le~~~~ 45 (236)
.+|++.++.+..+..+|.++..+..+..
T Consensus 3 ~~~~e~Q~~i~~~~~l~~~~~~l~~q~~ 30 (117)
T 2zqm_A 3 NIPPQVQAMLGQLESYQQQLQLVVQQKQ 30 (117)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999998886653
No 16
>2fsf_A Preprotein translocase SECA subunit; ATPase, DNA-RNA helicase, protein translocation, protein transport; 2.00A {Escherichia coli} PDB: 2fsg_A* 2fsh_A* 2fsi_A* 2vda_A 3bxz_A*
Probab=24.78 E-value=1.2e+02 Score=30.25 Aligned_cols=45 Identities=20% Similarity=0.454 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhcc
Q 026586 28 EKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (236)
Q Consensus 28 ~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~ 72 (236)
.++...|+..+..+-...+.+++...--+.+++-+|.+|++++.+
T Consensus 617 ~~i~~aq~~ve~~~~~~Rk~ll~yddv~n~QR~~iy~~R~~~l~~ 661 (853)
T 2fsf_A 617 KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDV 661 (853)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 345667888888888888888888888889999999999999965
No 17
>1nkt_A Preprotein translocase SECA 1 subunit; preprotein translocation, ATPase, transmembrane transport, helicase-like motor domain; HET: ADP; 2.60A {Mycobacterium tuberculosis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1nl3_A
Probab=24.70 E-value=1.2e+02 Score=30.43 Aligned_cols=45 Identities=24% Similarity=0.447 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhcc
Q 026586 28 EKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (236)
Q Consensus 28 ~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~ 72 (236)
.++...|++.+..+-...+.+++...--+.+++-+|.+|++++.+
T Consensus 651 ~~ie~aQkkvE~~nf~iRk~ll~yDdv~n~QR~~iY~~R~~iL~~ 695 (922)
T 1nkt_A 651 RAIKSAQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEG 695 (922)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 446667999999998888888888888889999999999999975
No 18
>2ipc_A Preprotein translocase SECA subunit; nucleotide binding fold, ATPase, parallel dimer; 2.80A {Thermus thermophilus}
Probab=22.97 E-value=1.4e+02 Score=30.28 Aligned_cols=45 Identities=20% Similarity=0.341 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhcc
Q 026586 28 EKLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (236)
Q Consensus 28 ~~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~ 72 (236)
.++...|++.+..+-...+.+++...--+.+++-+|.+|+.++.+
T Consensus 732 ~~ie~AQkkvE~~nf~iRK~ll~yDdV~n~QR~~IY~~R~~iL~~ 776 (997)
T 2ipc_A 732 RSIERAQKRVEDRNFAIRKQLLQFDDVLSRQREVIYAQRRLILLG 776 (997)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345667999999999999999988888889999999999999976
No 19
>1tf5_A Preprotein translocase SECA subunit; ATPase, helicase, translocation, secretion, protein transport; 2.18A {Bacillus subtilis} SCOP: a.162.1.1 a.172.1.1 c.37.1.19 c.37.1.19 PDB: 1tf2_A 3iqy_A 1m6n_A 1m74_A* 3iqm_A 3jv2_A* 2ibm_A* 3dl8_A 1sx0_A 1sx1_A 1tm6_A
Probab=22.84 E-value=1.4e+02 Score=29.68 Aligned_cols=44 Identities=20% Similarity=0.394 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhHHhhhhhhcc
Q 026586 29 KLQEIQDELEKINEEASEKVLEVEQKYSEIRKPVYDKRNDIIKS 72 (236)
Q Consensus 29 ~L~~lQ~e~~~le~~~~~e~~~le~k~~~~~~Pl~~kR~eiI~~ 72 (236)
++...|+.++..+-...+.+++...--+.+++-+|.+|++++.+
T Consensus 580 ~i~~aq~~ve~~~~~~rk~ll~yddv~~~QR~~iy~~R~~~l~~ 623 (844)
T 1tf5_A 580 AVESSQKRVEGNNFDSRKQLLQYDDVLRQQREVIYKQRFEVIDS 623 (844)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 56667888888888888888888888899999999999999975
No 20
>4afl_A P29ING4, inhibitor of growth protein 4; cell cycle, tumour suppressor, chromatin remodelling; 2.28A {Homo sapiens}
Probab=22.49 E-value=1.1e+02 Score=21.62 Aligned_cols=31 Identities=16% Similarity=0.356 Sum_probs=25.0
Q ss_pred hcccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 026586 14 ENAEQIDSELVLSIEKLQEIQDELEKINEEA 44 (236)
Q Consensus 14 e~~~~~~~~~~~~i~~L~~lQ~e~~~le~~~ 44 (236)
+.+..||.+++..+..+..+..++..+..+.
T Consensus 11 d~ie~LP~El~r~~~~irelD~~~~~~~~~i 41 (104)
T 4afl_A 11 DSIENLPFELQRNFQLMRDLDQRTEDLKAEI 41 (104)
T ss_dssp HSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999988888877666553
No 21
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=21.60 E-value=1e+02 Score=16.40 Aligned_cols=17 Identities=24% Similarity=0.624 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHH
Q 026586 27 IEKLQEIQDELEKINEE 43 (236)
Q Consensus 27 i~~L~~lQ~e~~~le~~ 43 (236)
...|.++|..+.++..+
T Consensus 7 ykeledlqerlrklrkk 23 (27)
T 3twe_A 7 YKELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45666677766666544
Done!