BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026587
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LD27|PSB6_ARATH Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1
SV=2
Length = 233
Score = 431 bits (1109), Expect = e-120, Method: Compositional matrix adjust.
Identities = 205/236 (86%), Positives = 221/236 (93%), Gaps = 3/236 (1%)
Query: 1 MDLKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCR 60
MDL ++ APHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CR
Sbjct: 1 MDLNLD---APHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCR 57
Query: 61 SGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 120
SGSAADSQ VSDYVRYFLHQHTIQ GQPATVKV+ANL+R+L+YNNKN LQTG+IVGGWDK
Sbjct: 58 SGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNMLQTGLIVGGWDK 117
Query: 121 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 180
YEGGKIYG+PLGGT++EQPFAIGGSGSSYLYGFFDQAWK+ MTKEEAEQLVVKAVSLAIA
Sbjct: 118 YEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIA 177
Query: 181 RDGASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPMNM 236
RDGASGGVVRTV INSEGV+R FYPGD L LWHEELEPQNSLLD++N A PEPM M
Sbjct: 178 RDGASGGVVRTVIINSEGVTRNFYPGDKLQLWHEELEPQNSLLDILNAAGPEPMAM 233
>sp|P93395|PSB6_TOBAC Proteasome subunit beta type-6 OS=Nicotiana tabacum PE=2 SV=1
Length = 234
Score = 414 bits (1065), Expect = e-115, Method: Compositional matrix adjust.
Identities = 197/232 (84%), Positives = 215/232 (92%)
Query: 3 LKMEDFNAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSG 62
++ D + PHSMGTTIIGVTYNGGVVLGADSRTSTG+YVANRASDKITQLTDNVY+CRSG
Sbjct: 1 MENTDVDQPHSMGTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSG 60
Query: 63 SAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYE 122
SAADSQ VSDYVRYFLHQHTIQLGQPATVKVAANL RLLSYNNK+ LQTGMI+GGWDKYE
Sbjct: 61 SAADSQIVSDYVRYFLHQHTIQLGQPATVKVAANLTRLLSYNNKDRLQTGMIIGGWDKYE 120
Query: 123 GGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARD 182
GGKIYG+P GGT++EQPFAIGGSGSSYLYGFFDQAWKEGMT+EEAE+LVV AVSLAIARD
Sbjct: 121 GGKIYGIPPGGTVLEQPFAIGGSGSSYLYGFFDQAWKEGMTQEEAEKLVVTAVSLAIARD 180
Query: 183 GASGGVVRTVTINSEGVSRKFYPGDTLPLWHEELEPQNSLLDMMNVASPEPM 234
GASGGVVRTVTIN +G +RKFY GD+L LWHEELEP NSLLD++ +SP PM
Sbjct: 181 GASGGVVRTVTINKDGATRKFYSGDSLQLWHEELEPVNSLLDVVFASSPVPM 232
>sp|Q55GJ6|PSB6_DICDI Proteasome subunit beta type-6 OS=Dictyostelium discoideum GN=psmB6
PE=1 SV=1
Length = 214
Score = 242 bits (617), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 108/201 (53%), Positives = 152/201 (75%)
Query: 14 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDY 73
+GT+I+ V Y+GGV++GADSRT+TG Y+ANR ++KIT + + +Y CRSGSAAD+Q +SDY
Sbjct: 13 LGTSIMAVEYDGGVIMGADSRTTTGAYIANRVTNKITPIHERIYCCRSGSAADTQAISDY 72
Query: 74 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
VRY+L HT +L VK AA+L +LL Y+NKN L G+IV GWDK++GG +Y + LGG
Sbjct: 73 VRYYLEMHTSELCDEPDVKTAASLFQLLCYSNKNNLMAGIIVAGWDKHQGGSVYNISLGG 132
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
++++QPFAIGGSGS+Y+YG+ D +K MTK+E + V +++LA+ RDG+SGGV+R
Sbjct: 133 SMVKQPFAIGGSGSTYIYGYCDSKFKPKMTKDECIEFVQNSLALAMFRDGSSGGVIRLCI 192
Query: 194 INSEGVSRKFYPGDTLPLWHE 214
I+ GV RK PG+ LP + E
Sbjct: 193 IDKNGVERKMIPGNNLPRFWE 213
>sp|O43063|PSB1_SCHPO Probable proteasome subunit beta type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pre3 PE=3 SV=1
Length = 226
Score = 231 bits (589), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 143/195 (73%)
Query: 14 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDY 73
MGTTI + Y GV+L ADSRT+ G Y+ANR +DK+TQLTDN++ CRSGSAAD+QTV+D
Sbjct: 23 MGTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADL 82
Query: 74 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
++Y+L + IQ G +V AA L + Y NKN L G+IV G+D+ GG +Y +PLGG
Sbjct: 83 LKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNMLSAGLIVAGYDEKTGGDVYSIPLGG 142
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
++ +QP AIGGSGS+++YGF D ++E MT+EEA + + AV+LA+ RDG+SGG +R V
Sbjct: 143 SLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVI 202
Query: 194 INSEGVSRKFYPGDT 208
+N +G+ RKF+ DT
Sbjct: 203 LNKDGMERKFFAIDT 217
>sp|Q3MHN0|PSB6_BOVIN Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1
Length = 239
Score = 229 bits (583), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 142/198 (71%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q V+D
Sbjct: 32 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVAD 91
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 92 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 151
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 192
G ++ QPFAIGGSGSSY+YG+ D ++EGMTKEE Q A++LA+ RDG+SGGV+R
Sbjct: 152 GMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLA 211
Query: 193 TINSEGVSRKFYPGDTLP 210
I GV R+ GD +P
Sbjct: 212 AIAEPGVERQVLLGDQIP 229
>sp|Q60692|PSB6_MOUSE Proteasome subunit beta type-6 OS=Mus musculus GN=Psmb6 PE=1 SV=3
Length = 238
Score = 227 bits (579), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 142/198 (71%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V +NGGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q V+D
Sbjct: 31 STGTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVAD 90
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 91 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 150
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 192
G ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q A++LA+ RDG+SGGV+R
Sbjct: 151 GMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLA 210
Query: 193 TINSEGVSRKFYPGDTLP 210
I GV R+ GD +P
Sbjct: 211 AIQESGVERQVLLGDQIP 228
>sp|P28072|PSB6_HUMAN Proteasome subunit beta type-6 OS=Homo sapiens GN=PSMB6 PE=1 SV=4
Length = 239
Score = 225 bits (574), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 141/198 (71%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D ++ CRSGSAAD+Q V+D
Sbjct: 32 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVAD 91
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 92 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 151
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 192
G ++ Q FAIGGSGSSY+YG+ D ++EGMTKEE Q A++LA+ RDG+SGGV+R
Sbjct: 152 GMMVRQSFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLA 211
Query: 193 TINSEGVSRKFYPGDTLP 210
I GV R+ GD +P
Sbjct: 212 AIAESGVERQVLLGDQIP 229
>sp|P28073|PSB6_RAT Proteasome subunit beta type-6 OS=Rattus norvegicus GN=Psmb6 PE=1
SV=3
Length = 238
Score = 225 bits (574), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 142/198 (71%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S GTTI+ V ++GGVVLGADSRT+TG Y+ANR +DK+T + D+++ CRSGSAAD+Q V+D
Sbjct: 31 STGTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVAD 90
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V Y L H+I+L +P V AA+L + + Y + L G+I+ GWD EGG++Y VP+G
Sbjct: 91 AVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYREDLMAGIIIAGWDPQEGGQVYSVPMG 150
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 192
G ++ Q FAIGGSGSSY+YG+ D ++EGMTK+E Q A++LA+ RDG+SGGV+R
Sbjct: 151 GMMVRQSFAIGGSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLA 210
Query: 193 TINSEGVSRKFYPGDTLP 210
I GV R+ GD +P
Sbjct: 211 AIQQSGVERQVLLGDQIP 228
>sp|A7KII6|PB6LB_SALSA Proteasome subunit beta type-6-B like protein OS=Salmo salar
GN=psmb6l-b PE=3 SV=1
Length = 217
Score = 204 bits (518), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRASDKITQLTDNVYLCRSGSAADSQTVS 71
S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+
Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 72 DYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPL 131
++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V L
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVAL 133
Query: 132 GGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRT 191
GG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD SGGV
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFATNALALAMGRDNVSGGVAHL 193
Query: 192 VTINSEGVSRKFYPGDTLPLWHEE 215
V I EGV PGD LP +H+E
Sbjct: 194 VVITEEGVEHVVIPGDKLPKFHDE 217
>sp|A7KE01|PB6LA_SALSA Proteasome subunit beta type-6-A like protein OS=Salmo salar
GN=psmb6l-a PE=3 SV=1
Length = 217
Score = 203 bits (516), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTG-VYVANRASDKITQLTDNVYLCRSGSAADSQTVS 71
S GTTI+ VT+NGGV++G+DSR S G YV+++ +K+ Q+ D ++ C +GS AD+Q V+
Sbjct: 14 STGTTILAVTFNGGVIIGSDSRASIGGSYVSSKTINKLIQVHDRIFCCIAGSLADAQAVT 73
Query: 72 DYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPL 131
++ + H+IQ+ P VK AA++++ L YNNK LQ G I GWD+ +G ++Y V L
Sbjct: 74 KAAKFQISFHSIQMESPPLVKAAASVLKELCYNNKEELQAGFITAGWDRKKGPQVYTVAL 133
Query: 132 GGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRT 191
GG ++ QPF IGGSGS+Y+YG+ D +K M+KEE Q A++LA+ RD SGGV
Sbjct: 134 GGMLLSQPFTIGGSGSTYIYGYADAKYKPDMSKEECLQFAKNALALAMGRDNVSGGVAHL 193
Query: 192 VTINSEGVSRKFYPGDTLPLWHEE 215
V I EGV PGD LP +H+E
Sbjct: 194 VVITEEGVEHVVIPGDKLPKFHDE 217
>sp|P38624|PSB1_YEAST Proteasome subunit beta type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE3 PE=1 SV=2
Length = 215
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 142/196 (72%), Gaps = 2/196 (1%)
Query: 13 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSD 72
S+GT+I+ VT+ GV+LGADSRT+TG Y+ANR +DK+T++ D ++ CRSGSAAD+Q ++D
Sbjct: 17 SLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIAD 76
Query: 73 YVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLG 132
V+Y L +T Q G P+T + AA++ + L Y NK+ L G+IV G+D G++Y +PLG
Sbjct: 77 IVQYHLELYTSQYGTPST-ETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLG 135
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 192
G++ + P+AI GSGS+++YG+ D+ ++E M+KEE + ++S AI DG+SGGV+R V
Sbjct: 136 GSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMV 195
Query: 193 TINSEGVSRK-FYPGD 207
+ + GV R FYP +
Sbjct: 196 VLTAAGVERLIFYPDE 211
>sp|P28065|PSB9_HUMAN Proteasome subunit beta type-9 OS=Homo sapiens GN=PSMB9 PE=1 SV=2
Length = 219
Score = 197 bits (502), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 137/201 (68%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L + +Y SGSAAD+Q V+D
Sbjct: 20 GTTIMAVEFDGGVVMGSDSRVSAGEAVVNRVFDKLSPLHERIYCALSGSAADAQAVADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H I+L +P V AAN+VR +SY + L ++V GWD+ EGG++YG LGG
Sbjct: 80 AYQLELHGIELEEPPLVLAAANVVRNISYKYREDLSAHLMVAGWDQREGGQVYGT-LGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ QPFAIGGSGS+++YG+ D A+K GM+ EE + A++LA++RDG+SGGV+ VTI
Sbjct: 139 LTRQPFAIGGSGSTFIYGYVDAAYKPGMSPEECRRFTTDAIALAMSRDGSSGGVIYLVTI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ GV + G+ LP +++E
Sbjct: 199 TAAGVDHRVILGNELPKFYDE 219
>sp|Q9PT26|PSB9_ONCMY Proteasome subunit beta type-9 OS=Oncorhynchus mykiss GN=psmb9 PE=2
SV=1
Length = 217
Score = 197 bits (501), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 139/201 (69%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMV 77
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G
Sbjct: 78 NYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEDLSAHLIVAGWDKRGGGQVY-VTLNGL 136
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ QPFA+GGSGSSY+YGF D +++ M+KE+ +Q VV +SLA++RDG+SGGV VTI
Sbjct: 137 LSRQPFAVGGSGSSYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ +G K G+ LP ++++
Sbjct: 197 DEKGAEEKCILGNELPTFYDQ 217
>sp|Q9DD33|PSB9_SALSA Proteasome subunit beta type-9 OS=Salmo salar GN=psmb9-a PE=2 SV=1
Length = 217
Score = 197 bits (500), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 139/201 (69%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTII + ++GGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V
Sbjct: 18 GTTIIAIEFDGGVVLGSDSRVSAGETVVNRVMNKLSLLHDKIYCALSGSAADAQTIAEMV 77
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H+I++G+ V+ AA LV+ +SY K L +IV GWDK GG++Y V L G
Sbjct: 78 NYQLDVHSIEVGEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDKRGGGQVY-VTLNGL 136
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ QPFA+GGSGS+Y+YGF D +++ M+KE+ +Q VV +SLA++RDG+SGGV VTI
Sbjct: 137 LSRQPFAVGGSGSAYVYGFVDAEYRKAMSKEDCQQFVVNTLSLAMSRDGSSGGVAYLVTI 196
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ +G K G+ LP ++++
Sbjct: 197 DEKGAEEKCILGNELPTFYDQ 217
>sp|Q8UW64|PSB9_ORYLA Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3
SV=1
Length = 217
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 135/201 (67%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTII + +NGGVVLG+DSR S G V NR +K++ L D +Y SGSAAD+QT+++ V
Sbjct: 18 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEMV 77
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H++++ + V+ AA LV+ +SY K L +IV GWD+ +GG+++ LGG
Sbjct: 78 NYQLDVHSLEIDEDPQVRSAATLVKNISYKYKEELSAHLIVAGWDRRDGGQVFAT-LGGL 136
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ QPFAIGGSGSSY+YGF D ++ GMTKEE ++ VV ++LA+ RDG+SGGV VTI
Sbjct: 137 LTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTI 196
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ K G+ LP + ++
Sbjct: 197 DEHSTDEKVILGNDLPTFFDQ 217
>sp|Q3SZC2|PSB9_BOVIN Proteasome subunit beta type-9 OS=Bos taurus GN=PSMB9 PE=1 SV=1
Length = 219
Score = 193 bits (491), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 134/201 (66%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++Y SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQHIYCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+VR ++Y + L ++V GWD+ EGG++YG + G
Sbjct: 80 AYQLELHGMELEEPPLVLAAANVVRNITYKYREDLSAHLMVAGWDQREGGQVYGT-MSGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+I QPFAIGGSGS+Y+YG+ D A+K GM+ EE + A++LA+ RDG+SGGV+ TI
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMSPEECRRFTTNAIALAMKRDGSSGGVIYLATI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
GV + GD LP +++E
Sbjct: 199 TGAGVDHRVILGDELPRFYDE 219
>sp|P28077|PSB9_RAT Proteasome subunit beta type-9 OS=Rattus norvegicus GN=Psmb9 PE=1
SV=2
Length = 219
Score = 190 bits (483), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 138/201 (68%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L +Y SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIYCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L ++V GWD++EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANIVKNISYKYREDLLAHLMVAGWDQHEGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+I QPFAIGGSGS+Y+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI
Sbjct: 139 LIRQPFAIGGSGSTYIYGYVDAAYKPGMTPEECRRFTTDAITLAMNRDGSSGGVIYLVTI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
++GV + GD LP +++E
Sbjct: 199 TADGVDHRVILGDELPKFYDE 219
>sp|O35524|PSB9_MUSSI Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1
Length = 219
Score = 187 bits (475), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 135/201 (67%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ GV + GD LP +++E
Sbjct: 199 TAAGVDHRVILGDELPRFYDE 219
>sp|P28076|PSB9_MOUSE Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1
Length = 219
Score = 187 bits (474), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 135/201 (67%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ GV + GD LP +++E
Sbjct: 199 TAAGVDHRVILGDELPKFYDE 219
>sp|Q8SR11|PSB1_ENCCU Probable proteasome subunit beta type-1 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=PRE3 PE=1 SV=1
Length = 203
Score = 186 bits (471), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 134/201 (66%), Gaps = 3/201 (1%)
Query: 9 NAPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQ 68
N GTTII + Y+ GV++GADSRTS G YV++R +DK+TQ+TD +++CRSGS+AD+Q
Sbjct: 4 NEKEMTGTTIIAIKYDDGVLIGADSRTSMGAYVSSRVTDKLTQITDKIFVCRSGSSADTQ 63
Query: 69 TVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYG 128
+S Y+R +L ++ V+ AA L + Y N + L G+IV G+D + +++
Sbjct: 64 MISSYLRMYLSMYSQLEDSIPQVQRAAALASKIIYENPSLL-AGLIVAGYD--DKPRVFN 120
Query: 129 VPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGV 188
+ LGG++ E+ +AIGGSGS+++YG+ D W+ GM+ EE + V AVS AI RD ASGG
Sbjct: 121 ISLGGSLTERDWAIGGSGSAFIYGYCDVNWRSGMSLEEGIRFVRNAVSCAINRDNASGGC 180
Query: 189 VRTVTINSEGVSRKFYPGDTL 209
+R I+ GV R FYPGD +
Sbjct: 181 IRMSAISRTGVQRYFYPGDKV 201
>sp|O35521|PSB9_MUSDU Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1
Length = 219
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 134/201 (66%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ GV + GD LP ++ E
Sbjct: 199 TAAGVDHRVILGDELPKFYGE 219
>sp|O35523|PSB9_MUSPL Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1
Length = 219
Score = 185 bits (469), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 134/201 (66%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+I QPF IGGSGSSY+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI
Sbjct: 139 LIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
GV + GD LP +++E
Sbjct: 199 TVAGVDHRVILGDELPKFYDE 219
>sp|O35522|PSB9_MUSMB Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9
PE=1 SV=1
Length = 219
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 134/201 (66%), Gaps = 1/201 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI+ V ++GGVV+G+DSR S G V NR DK++ L ++ SGSAAD+Q ++D
Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMA 79
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
Y L H ++L +P V AAN+V+ +SY + L +IV GWD+ EGG++YG +GG
Sbjct: 80 AYQLELHGLELEEPPLVLAAANVVKNISYKYREDLLAHLIVAGWDQREGGQVYGT-MGGM 138
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+I QPF I GSGSSY+YG+ D A+K GMT EE + A++LA+ RDG+SGGV+ VTI
Sbjct: 139 LIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGVIYLVTI 198
Query: 195 NSEGVSRKFYPGDTLPLWHEE 215
+ GV + GD LP +++E
Sbjct: 199 TAAGVDHRVILGDELPKFYDE 219
>sp|A9A2U7|PSB2_NITMS Proteasome subunit beta 2 OS=Nitrosopumilus maritimus (strain SCM1)
GN=psmB2 PE=3 SV=1
Length = 210
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ GVVL AD R S G ++AN + KI ++ D+ L +G AD+Q + D +
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQNIVDIL 71
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGG 133
RY + H ++ P ++ A L L+ + N+ + ++VGG+D EG ++ + + G
Sbjct: 72 RYHSNLHRVEKHGPISIHSLARLCSLIFHQNRGYPFMADILVGGYDA-EGPALFNIDMFG 130
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
++ ++ + GSGS YG ++ ++E +T EEA+++ ++AV AI R+ +G +
Sbjct: 131 SVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNIGTGDGINIAI 190
Query: 194 INSEG 198
++ +G
Sbjct: 191 MDKDG 195
>sp|Q7DLS1|PSB7B_ARATH Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2
PE=1 SV=2
Length = 274
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 3 LKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCR 60
L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C
Sbjct: 25 LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG 84
Query: 61 SGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 120
+G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D
Sbjct: 85 AGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVD- 143
Query: 121 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 180
G ++ + G+ PFA GSGS F+ +KEG+T++E +LV +A+ I
Sbjct: 144 ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIF 203
Query: 181 RDGASGGVVRTVTIN 195
D SG V I
Sbjct: 204 NDLGSGSNVDICVIT 218
>sp|A3MS44|PSB1_PYRCJ Proteasome subunit beta 1 OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=psmB1 PE=3 SV=1
Length = 201
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 105/190 (55%), Gaps = 2/190 (1%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++A +KI ++ D+V SG AD Q+V ++
Sbjct: 2 TTTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFLS 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEGGKIYGVPLGGT 134
++ ++ +P ++ N V LL + ++ ++ IVGG D EG +Y V GT
Sbjct: 62 LRAREYRVEHKRPIPIRALVNYVSLLLFYSRPYIYLVHSIVGGVDAEEGPVLYMVDWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ ++ + GSGS Y G + A++E +T +EA +L ++AV AI D SG + VTI
Sbjct: 122 VTKEKYIATGSGSPYAKGALEVAYREDLTIDEAVELAIRAVKAAIRNDPGSGEGIDVVTI 181
Query: 195 -NSEGVSRKF 203
S+G R F
Sbjct: 182 TKSDGFRRVF 191
>sp|O23710|PSB7A_ARATH Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1
PE=1 SV=2
Length = 273
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 3/195 (1%)
Query: 3 LKMEDFNAPHSM--GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCR 60
L + AP + GTTI+G+ + GV+LGAD+R + G VA++ +KI + N+Y C
Sbjct: 25 LTQKGLKAPSFLKTGTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG 84
Query: 61 SGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDK 120
+G+AAD++ V+D V L H Q G+ + V A L++ ++ + + +++GG D
Sbjct: 85 AGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVD- 143
Query: 121 YEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIA 180
G ++ + G+ PFA GSGS F+ +KEG+T++E +LV +++ I
Sbjct: 144 ITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIF 203
Query: 181 RDGASGGVVRTVTIN 195
D SG V I
Sbjct: 204 NDLGSGSNVDICVIT 218
>sp|Q8ZYF2|PSB1_PYRAE Proteasome subunit beta 1 OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827)
GN=psmB1 PE=3 SV=1
Length = 202
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 2/198 (1%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++ +KI ++ D+V SG AD Q+V ++
Sbjct: 2 TTTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEGGKIYGVPLGGT 134
H++ I+ +P + N + L+ + ++ ++ I+GG D+ EG +Y V GT
Sbjct: 62 LRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHSIIGGVDEEEGAVLYMVDWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASG-GVVRTVT 193
+ ++ + GSGS Y G + ++E MT E+A L +KAV AI D SG G+ V
Sbjct: 122 VTKEKYIATGSGSPYAKGALEVGYREDMTLEDAVDLAIKAVKAAIRNDPGSGEGIDVVVI 181
Query: 194 INSEGVSRKFYPGDTLPL 211
EG R F L L
Sbjct: 182 TRKEGFKRVFTTQQKLVL 199
>sp|A0RXV1|PSB2_CENSY Proteasome subunit beta 2 OS=Cenarchaeum symbiosum (strain A)
GN=psmB2 PE=3 SV=2
Length = 210
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ GVVL AD R S G ++AN + KI ++ D+ L +G AD+Q + D +
Sbjct: 12 GTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQNIVDVL 71
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGG 133
RY H I+ P +K A L L+ + N+ + +++GG+D G +Y + + G
Sbjct: 72 RYHASLHRIRKQGPIPIKSLARLTSLIFHQNRGYPFMADILMGGFDAV-GPALYNIDMFG 130
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
++ E+ + GSGS YG ++ ++ +T +EA+ + ++AV AI R+ +G +
Sbjct: 131 SVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGINVAV 190
Query: 194 INSEG 198
IN G
Sbjct: 191 INGNG 195
>sp|A1RTI7|PSB2_PYRIL Proteasome subunit beta 2 OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=psmB2 PE=3 SV=1
Length = 200
Score = 105 bits (261), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++ +KI ++ D+V SG AD Q++ ++
Sbjct: 2 TTTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFLT 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEGGKIYGVPLGGT 134
++ I+ +P ++ N V L+ + ++ ++ I+GG D+ EG +Y V GT
Sbjct: 62 LRAREYKIEYKRPIPIRALVNYVSLILFYSRPYIYLVHSIIGGVDREEGAVLYMVDWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ + + GSGS Y G + ++E M+ E+A L +++V AI D SG + V I
Sbjct: 122 VTRERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIRSVKAAIRNDPGSGEGIDVVVI 181
Query: 195 NSEGVSRKF 203
EG R F
Sbjct: 182 TKEGFRRVF 190
>sp|A8M8R5|PSB2_CALMQ Proteasome subunit beta 2 OS=Caldivirga maquilingensis (strain ATCC
700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=psmB2 PE=3
SV=1
Length = 200
Score = 104 bits (260), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 106/187 (56%), Gaps = 4/187 (2%)
Query: 14 MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDY 73
M T +G+ GVVL A+ R S G Y+ +++ K+ +T+ + L SG AD QT++
Sbjct: 8 MTGTTVGIKAKDGVVLAAEKRVSYGFYLMSKSGKKVYPITNRIGLASSGILADIQTITKV 67
Query: 74 VRYFLHQHTIQLGQPATVKVAANLVRLLSYNNK--NFLQTGMIVGGWDKYEGGKIYGVPL 131
+R + I++ +P +V+ AA L+ ++ + NK ++ M VGG D+ EG K++ +
Sbjct: 68 IRANIANMEIEMKRPVSVRAAAKLLSIMLFQNKYMPYIAETM-VGGIDE-EGPKLFILDS 125
Query: 132 GGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRT 191
G++IE FA G+G+ G + + +T +EA++L +KA+ AIARD SG + T
Sbjct: 126 WGSLIEDDFAALGNGARTAIGLIETGYSSSITVKEAKELAIKAIKEAIARDPTSGDGIDT 185
Query: 192 VTINSEG 198
+ I G
Sbjct: 186 LVITGNG 192
>sp|A1RWY6|PSB1_THEPD Proteasome subunit beta 1 OS=Thermofilum pendens (strain Hrk 5)
GN=psmB1 PE=3 SV=1
Length = 200
Score = 104 bits (259), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 1/188 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ VVL AD R + G ++AN+ + KI ++ ++ +G+ D+Q + D +
Sbjct: 12 GTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRL 71
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
R + G VK A L L+ + + L M++GG D +G ++ V GT
Sbjct: 72 RVEARYYKTITGDSMPVKSVATLASLILFQYRPILSVQMLIGGVDS-DGPSLFSVDWLGT 130
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ + + GSGS Y + ++E ++ EEA L VKAV++A+ARD SG V TI
Sbjct: 131 VTREKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNIALARDPGSGEGVDIATI 190
Query: 195 NSEGVSRK 202
EG+ K
Sbjct: 191 TKEGIRMK 198
>sp|Q9YER0|PSB2_AERPE Proteasome subunit beta 2 OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=psmB2 PE=3
SV=2
Length = 219
Score = 103 bits (257), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 107/196 (54%), Gaps = 3/196 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ + V+L AD R + G +A+R KI L++ V + SG AD+Q +SD +
Sbjct: 25 GTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDVL 84
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGG 133
R + + + +V+ A+L+ + +++K F +IVGG+D ++Y + L G
Sbjct: 85 REEIRLYEMTNKVKPSVRFVASLLSNILFSSKFFPYIVQLIVGGYDTQP--RLYTLDLFG 142
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
+I E + GSGS YG ++ ++E ++ EEA ++ A+ A+ RD ASG V
Sbjct: 143 SITEDKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDGADVVV 202
Query: 194 INSEGVSRKFYPGDTL 209
I +G KF P ++L
Sbjct: 203 IGPQGYEEKFIPYNSL 218
>sp|P70195|PSB7_MOUSE Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1
Length = 277
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 2 DLKMEDFNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC 59
D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C
Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87
Query: 60 RSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 119
+G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D
Sbjct: 88 GAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD 147
Query: 120 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 179
G +Y + G+ + P+ GSGS F+ ++ M +EEA++LV +A++ I
Sbjct: 148 -VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGI 206
Query: 180 ARDGASGGVVRTVTIN 195
D SG + I+
Sbjct: 207 FNDLGSGSNIDLCVIS 222
>sp|A0B5B1|PSB_METTP Proteasome subunit beta OS=Methanosaeta thermophila (strain DSM
6194 / PT) GN=psmB PE=3 SV=1
Length = 207
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 101/185 (54%), Gaps = 3/185 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ +GGVVL ++SR + G ++A+R + KI Q+ D V L +G D+Q + +
Sbjct: 7 GTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVRMI 66
Query: 75 RYFLHQHTIQLGQPATVKVAANLV-RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGV-PLG 132
+ + +Q G+P T+K +L+ +LS ++VGG DK G KI+ + LG
Sbjct: 67 QAEARLYRMQRGEPLTIKAITSLLSNILSARRYFPFLVQLVVGGVDKM-GPKIFSLDALG 125
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 192
G I E GSGS YG + +K G++ ++ L V+AV A+ RD ASG + V
Sbjct: 126 GQIEEHDIVSTGSGSPIAYGVLESLYKPGLSIQDGSVLCVRAVHTAMKRDSASGNGIALV 185
Query: 193 TINSE 197
I +
Sbjct: 186 RITKD 190
>sp|Q9JHW0|PSB7_RAT Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1
SV=1
Length = 277
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 2 DLKMEDFNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLC 59
D + F P + GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C
Sbjct: 28 DFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCC 87
Query: 60 RSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWD 119
+G+AAD+ + + L H++ G+ V A +++ + + + ++ +++GG D
Sbjct: 88 GAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD 147
Query: 120 KYEGGKIYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAI 179
G +Y + G+ + P+ GSGS F+ ++ M +EEA++LV +A++ I
Sbjct: 148 -VTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGI 206
Query: 180 ARDGASGGVVRTVTIN 195
D SG + I+
Sbjct: 207 FNDLGSGSNIDLCVIS 222
>sp|A1XQU1|PSB7_PIG Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2
Length = 277
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGS 161
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ P+ GSGS F+ ++ M +EEA+QLV +A++ I D SG + I
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEAIAAGIFNDLGSGSNIDLCVI 221
Query: 195 N 195
+
Sbjct: 222 S 222
>sp|D3RX66|PSB_FERPA Proteasome subunit beta OS=Ferroglobus placidus (strain DSM 10642 /
AEDII12DO) GN=psmB PE=3 SV=1
Length = 210
Score = 102 bits (253), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 103/185 (55%), Gaps = 3/185 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ GVVL + R + G ++A+R + KI ++TD + + +GS D+Q ++ +
Sbjct: 9 GTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLARLI 68
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGV-PLG 132
+ + +TI+ + TVK A LV L + + F +++GG DK G KIY + P+G
Sbjct: 69 KVETNLYTIRKEEEPTVKAVATLVSNLLNSVRYFPYLVQLLIGGVDK-TGAKIYSIDPIG 127
Query: 133 GTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTV 192
G I E GSGS YG + +++ + +EA +L ++A+ A+ RD ASG + V
Sbjct: 128 GAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDSASGDGIDVV 187
Query: 193 TINSE 197
I +
Sbjct: 188 KITEK 192
>sp|Q2TBP0|PSB7_BOVIN Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1
Length = 277
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 99/181 (54%), Gaps = 1/181 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGS 161
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ P+ GSGS F+ ++ M +EEA++LV +A++ I D SG + I
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVI 221
Query: 195 N 195
+
Sbjct: 222 S 222
>sp|Q99436|PSB7_HUMAN Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1
Length = 277
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTTI GV Y G+VLGAD+R + G+ VA++ KI ++ N+Y C +G+AAD+ + +
Sbjct: 43 GTTIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI 102
Query: 75 RYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGT 134
L H++ G+ V A +++ + + + ++ +++GG D G +Y + G+
Sbjct: 103 SSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVD-VTGPHLYSIYPHGS 161
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVTI 194
+ P+ GSGS F+ ++ M +EEA+ LV +A++ I D SG + I
Sbjct: 162 TDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVI 221
Query: 195 N 195
+
Sbjct: 222 S 222
>sp|B1YA36|PSB1_PYRNV Proteasome subunit beta 1 OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=psmB1 PE=3 SV=1
Length = 201
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 99/190 (52%), Gaps = 2/190 (1%)
Query: 16 TTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVR 75
TT +G+ GVVL D R + G Y+A++ +KI ++ D+V SG AD Q+V ++
Sbjct: 2 TTTVGIAVREGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSVLSFLT 61
Query: 76 YFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQ-TGMIVGGWDKYEGGKIYGVPLGGT 134
++ ++ +P ++ N V L+ + ++ ++ I+GG D EG +Y GT
Sbjct: 62 LRAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHSIIGGVDDEEGAVLYMADWLGT 121
Query: 135 IIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASG-GVVRTVT 193
+ ++ + GSGS Y G + ++E M+ E+A L +KAV AI D SG G+ V
Sbjct: 122 VTKERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIKAVKAAIRNDPGSGEGIDVVVI 181
Query: 194 INSEGVSRKF 203
EG R F
Sbjct: 182 TKREGFRRVF 191
>sp|B1L6S7|PSB1_KORCO Proteasome subunit beta 1 OS=Korarchaeum cryptofilum (strain OPF8)
GN=psmB1 PE=3 SV=1
Length = 206
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 103/187 (55%), Gaps = 2/187 (1%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +GV + GV++ +D R ++G +VA++++ K ++TD SG AD Q + + V
Sbjct: 5 GTTTVGVKFKNGVIVASDKRATSGTFVASKSAVKTLKITDYAVATISGLVADGQYLVNNV 64
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
R +++ +P +V+ +A L LL FL +IVGG D+ EG ++ V G
Sbjct: 65 RTIADLYSLDTERPLSVRGIARILAFLLRRYRPYFLLAQLIVGGVDR-EGAHLFNVDPFG 123
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
T+ E+ + GSGS + + M +E A +LV+ +++ A++RD A+G + V
Sbjct: 124 TLTEEDYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAALSRDAATGDGIDVVV 183
Query: 194 INSEGVS 200
I+ GV+
Sbjct: 184 IDDRGVN 190
>sp|P40306|PSB10_HUMAN Proteasome subunit beta type-10 OS=Homo sapiens GN=PSMB10 PE=1 SV=1
Length = 273
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 20/220 (9%)
Query: 8 FNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAA 65
PH+ GTTI G+ + GV+LGAD+R + VA+++ +KI + +Y C +G AA
Sbjct: 30 LKVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAA 89
Query: 66 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK 125
D++ + V + H + G+ V ++R + + + +IVGG D G +
Sbjct: 90 DAEMTTRMVASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLIVGGVD-LTGPQ 148
Query: 126 IYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGAS 185
+YGV G+ PF GSG + ++ MT E A+ L+V+AV+ I D S
Sbjct: 149 LYGVHPHGSYSRLPFTALGSGQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGS 208
Query: 186 GG-------------VVRTVTINSEGVSRK----FYPGDT 208
GG ++RT++ +E V R F PG T
Sbjct: 209 GGNVDACVITKTGAKLLRTLSSPTEPVKRSGRYHFVPGTT 248
>sp|O35955|PSB10_MOUSE Proteasome subunit beta type-10 OS=Mus musculus GN=Psmb10 PE=1 SV=1
Length = 273
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 21/230 (9%)
Query: 8 FNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAA 65
PH+ GTTI G+ + GV+LGAD+R + VA+++ +KI + +Y C +G AA
Sbjct: 30 LRVPHARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAA 89
Query: 66 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK 125
D++ + + H + G+ V ++R + + + ++VGG D G +
Sbjct: 90 DTEMTTRMAASKMELHALSTGREPRVATVTRILRQTLFRYQGHVGASLVVGGVD-LNGPQ 148
Query: 126 IYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGAS 185
+Y V G+ PF GSG + ++ MT E A++L+V+A++ I D S
Sbjct: 149 LYEVHPHGSYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGS 208
Query: 186 GGVV-------------RTVTINSEGVSR----KFYPGDTLPLWHEELEP 218
GG V R ++ +E V R +F PG T P+ E+ P
Sbjct: 209 GGNVDACVITAGGAKLQRALSTPTEPVQRAGRYRFAPGTT-PVLTREVRP 257
>sp|Q3T0T1|PSB10_BOVIN Proteasome subunit beta type-10 OS=Bos taurus GN=PSMB10 PE=1 SV=1
Length = 273
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 8 FNAPHS--MGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAA 65
PH+ GTTI G+ + GV+LGAD+R + VA++ +KI + +Y C +G AA
Sbjct: 30 LRVPHARKTGTTIAGLVFQDGVILGADTRATNDSVVADKICEKIHFIAPKIYCCGAGVAA 89
Query: 66 DSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGK 125
D++ + + H + G+ V ++R + + ++ +IVGG D + G +
Sbjct: 90 DAEMTTRMAASNMELHALSTGRECRVATVTRMLRQTLFRYQGYVGASLIVGGVD-FTGPQ 148
Query: 126 IYGVPLGGTIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGAS 185
+Y V G+ PF GSG + ++ MT E A++L+V+A++ I D S
Sbjct: 149 LYSVHPHGSYSRLPFTALGSGQDAAIAVLEDRFQPNMTLEAAQELLVEAITAGILGDLGS 208
Query: 186 GGVVRTVTINSEG 198
GG V I + G
Sbjct: 209 GGNVDACVITAAG 221
>sp|C3NE98|PSB1_SULIY Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=psmB1 PE=3 SV=1
Length = 211
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
I E+ + GSGS G + + MT +EA L +AV AI RD +G V
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVAK 194
Query: 194 INSEGVSRKFYPGDTLPLWHEELE 217
I+S+G HEELE
Sbjct: 195 IHSKG--------------HEELE 204
>sp|C3MVD5|PSB1_SULIM Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=psmB1 PE=3 SV=1
Length = 211
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
I E+ + GSGS G + + MT +EA L +AV AI RD +G V
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVAK 194
Query: 194 INSEGVSRKFYPGDTLPLWHEELE 217
I+S+G HEELE
Sbjct: 195 IHSKG--------------HEELE 204
>sp|C3MQ16|PSB1_SULIL Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmB1 PE=3 SV=1
Length = 211
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
I E+ + GSGS G + + MT +EA L +AV AI RD +G V
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVAK 194
Query: 194 INSEGVSRKFYPGDTLPLWHEELE 217
I+S+G HEELE
Sbjct: 195 IHSKG--------------HEELE 204
>sp|C4KHB0|PSB1_SULIK Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmB1 PE=3 SV=1
Length = 211
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
I E+ + GSGS G + + MT +EA L +AV AI RD +G V
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVAK 194
Query: 194 INSEGVSRKFYPGDTLPLWHEELE 217
I+S+G HEELE
Sbjct: 195 IHSKG--------------HEELE 204
>sp|D2PK63|PSB1_SULID Proteasome subunit beta 1 OS=Sulfolobus islandicus (strain L.D.8.5
/ Lassen #2) GN=psmB1 PE=3 SV=1
Length = 211
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 15 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYV 74
GTT +G+ N GVVL AD R S G +VAN+ K+ +TD + + +GS AD Q + D +
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 75 RYFLHQHTIQLGQPATVK-VAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGG 133
+ H ++I P ++K +A L +LS +++GG+D + +++ + G
Sbjct: 77 KNIYHYNSITKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYD--DQPRLFNLDYLG 134
Query: 134 TIIEQPFAIGGSGSSYLYGFFDQAWKEGMTKEEAEQLVVKAVSLAIARDGASGGVVRTVT 193
I E+ + GSGS G + + MT +EA L +AV AI RD +G V
Sbjct: 135 DITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIVAK 194
Query: 194 INSEGVSRKFYPGDTLPLWHEELE 217
I+S+G HEELE
Sbjct: 195 IHSKG--------------HEELE 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,831,425
Number of Sequences: 539616
Number of extensions: 3899988
Number of successful extensions: 11616
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 230
Number of HSP's that attempted gapping in prelim test: 10946
Number of HSP's gapped (non-prelim): 558
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)