Your job contains 1 sequence.
>026588
MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG
VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026588
(236 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2169518 - symbol:AT5G35530 species:3702 "Arabi... 1034 2.0e-104 1
TAIR|locus:2065863 - symbol:AT2G31610 species:3702 "Arabi... 1028 8.6e-104 1
TAIR|locus:2084490 - symbol:AT3G53870 species:3702 "Arabi... 1022 3.7e-103 1
UNIPROTKB|E2RH47 - symbol:RPS3 "40S ribosomal protein S3"... 929 2.7e-93 1
MGI|MGI:1350917 - symbol:Rps3 "ribosomal protein S3" spec... 929 2.7e-93 1
RGD|619888 - symbol:Rps3 "ribosomal protein S3" species:1... 929 2.7e-93 1
UNIPROTKB|Q3T169 - symbol:RPS3 "40S ribosomal protein S3"... 928 3.4e-93 1
UNIPROTKB|P23396 - symbol:RPS3 "40S ribosomal protein S3"... 928 3.4e-93 1
UNIPROTKB|Q0Z8U2 - symbol:RPS3 "40S ribosomal protein S3"... 928 3.4e-93 1
UNIPROTKB|F1N9X5 - symbol:RPS3 "Uncharacterized protein" ... 925 7.0e-93 1
UNIPROTKB|Q5R465 - symbol:RPS3 "40S ribosomal protein S3"... 924 9.0e-93 1
ZFIN|ZDB-GENE-030131-8494 - symbol:rps3 "ribosomal protei... 918 3.9e-92 1
RGD|1560831 - symbol:RGD1560831 "similar to 40S ribosomal... 890 3.6e-89 1
UNIPROTKB|J3KN86 - symbol:RPS3 "40S ribosomal protein S3"... 889 4.6e-89 1
UNIPROTKB|F1NPA9 - symbol:RPS3 "Uncharacterized protein" ... 883 2.0e-88 1
UNIPROTKB|G4MP11 - symbol:MGG_05673 "40S ribosomal protei... 858 8.9e-86 1
FB|FBgn0002622 - symbol:RpS3 "Ribosomal protein S3" speci... 854 2.4e-85 1
UNIPROTKB|E9PL09 - symbol:RPS3 "40S ribosomal protein S3"... 850 6.2e-85 1
POMBASE|SPBC16G5.14c - symbol:rps3 "40S ribosomal protein... 834 3.1e-83 1
ASPGD|ASPL0000016707 - symbol:AN4087 species:162425 "Emer... 830 8.2e-83 1
WB|WBGene00004472 - symbol:rps-3 species:6239 "Caenorhabd... 801 9.7e-80 1
SGD|S000005122 - symbol:RPS3 "Protein component of the sm... 781 1.3e-77 1
GENEDB_PFALCIPARUM|PF14_0627 - symbol:PF14_0627 "ribosoma... 759 2.7e-75 1
UNIPROTKB|Q8IKH8 - symbol:PF14_0627 "40S ribosomal protei... 759 2.7e-75 1
UNIPROTKB|F1SUM7 - symbol:RPS3 "40S ribosomal protein S3"... 714 1.6e-70 1
DICTYBASE|DDB_G0293000 - symbol:rps3 "40S ribosomal prote... 682 4.0e-67 1
CGD|CAL0001259 - symbol:RPS3 species:5476 "Candida albica... 674 2.8e-66 1
UNIPROTKB|H0YEU2 - symbol:RPS3 "40S ribosomal protein S3"... 421 1.6e-57 2
UNIPROTKB|E9PL45 - symbol:RPS3 "40S ribosomal protein S3"... 571 2.3e-55 1
UNIPROTKB|E9PPU1 - symbol:RPS3 "40S ribosomal protein S3"... 410 9.9e-52 2
UNIPROTKB|D4AAX0 - symbol:D4AAX0 "Uncharacterized protein... 536 1.2e-51 1
UNIPROTKB|F2Z2S8 - symbol:RPS3 "40S ribosomal protein S3"... 512 4.1e-49 1
UNIPROTKB|H0YCJ7 - symbol:RPS3 "40S ribosomal protein S3"... 503 3.7e-48 1
UNIPROTKB|H0YF32 - symbol:RPS3 "40S ribosomal protein S3"... 468 1.9e-44 1
UNIPROTKB|E9PJH4 - symbol:RPS3 "40S ribosomal protein S3"... 368 7.4e-34 1
UNIPROTKB|E9PQ96 - symbol:RPS3 "40S ribosomal protein S3"... 368 7.4e-34 1
UNIPROTKB|E9PSF4 - symbol:RPS3 "40S ribosomal protein S3"... 367 9.5e-34 1
UNIPROTKB|E9PK82 - symbol:RPS3 "40S ribosomal protein S3"... 333 3.8e-30 1
UNIPROTKB|E9PJN9 - symbol:RPS3 "40S ribosomal protein S3"... 149 1.2e-10 1
TIGR_CMR|CBU_0244 - symbol:CBU_0244 "ribosomal protein S3... 139 7.4e-08 1
UNIPROTKB|Q9KNZ0 - symbol:rpsC "30S ribosomal protein S3"... 134 3.8e-07 1
TIGR_CMR|VC_2590 - symbol:VC_2590 "ribosomal protein S3" ... 134 3.8e-07 1
UNIPROTKB|P0A7V3 - symbol:rpsC species:83333 "Escherichia... 124 6.9e-06 1
TIGR_CMR|CJE_1869 - symbol:CJE_1869 "ribosomal protein S3... 122 1.2e-05 1
TIGR_CMR|GSU_2851 - symbol:GSU_2851 "ribosomal protein S3... 120 1.5e-05 1
TIGR_CMR|NSE_0272 - symbol:NSE_0272 "ribosomal protein S3... 116 4.7e-05 1
TIGR_CMR|SPO_0487 - symbol:SPO_0487 "ribosomal protein S3... 116 6.8e-05 1
TIGR_CMR|CPS_0867 - symbol:CPS_0867 "ribosomal protein S3... 114 0.00011 1
TIGR_CMR|ECH_0415 - symbol:ECH_0415 "ribosomal protein S3... 111 0.00019 1
TIGR_CMR|APH_0286 - symbol:APH_0286 "ribosomal protein S3... 110 0.00026 1
TIGR_CMR|SO_0237 - symbol:SO_0237 "ribosomal protein S3" ... 111 0.00026 1
UNIPROTKB|P73314 - symbol:rpsC "30S ribosomal protein S3"... 109 0.00050 1
TIGR_CMR|BA_0116 - symbol:BA_0116 "ribosomal protein S3" ... 106 0.00089 1
>TAIR|locus:2169518 [details] [associations]
symbol:AT5G35530 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0016020 GO:GO:0006412
GO:GO:0009651 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20
InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814 EMBL:AB015477
Gene3D:3.30.1140.32 SUPFAM:SSF54821 HSSP:P23396
HOGENOM:HOG000210611 KO:K02985 ProtClustDB:CLSN2683263
TIGRFAMs:TIGR01008 EMBL:AY058057 EMBL:AY098949 IPI:IPI00539202
RefSeq:NP_198403.1 UniGene:At.23305 ProteinModelPortal:Q9FJA6
SMR:Q9FJA6 STRING:Q9FJA6 PRIDE:Q9FJA6 EnsemblPlants:AT5G35530.1
GeneID:833518 KEGG:ath:AT5G35530 TAIR:At5g35530 InParanoid:Q9FJA6
OMA:YRIANAM PhylomeDB:Q9FJA6 Genevestigator:Q9FJA6
GermOnline:AT5G35530 Uniprot:Q9FJA6
Length = 248
Score = 1034 (369.0 bits), Expect = 2.0e-104, P = 2.0e-104
Identities = 201/227 (88%), Positives = 214/227 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
VLG+KVKIML WDP GKQGP TPLPD+V IH+PK+++ Y+ P V T
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVT 227
>TAIR|locus:2065863 [details] [associations]
symbol:AT2G31610 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009651
"response to salt stress" evidence=IEP] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 GO:GO:0005774
GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0009651 GO:GO:0003723 GO:GO:0003735 UniGene:At.22510
EMBL:AC007071 GO:GO:0022627 UniGene:At.24124 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092 EMBL:AF378887
EMBL:AY046041 EMBL:AY052749 EMBL:AY054622 EMBL:AY081517
EMBL:AY091208 IPI:IPI00542059 PIR:H84722 RefSeq:NP_180719.1
HSSP:P23396 ProteinModelPortal:Q9SIP7 SMR:Q9SIP7 IntAct:Q9SIP7
STRING:Q9SIP7 PaxDb:Q9SIP7 PRIDE:Q9SIP7 EnsemblPlants:AT2G31610.1
GeneID:817719 KEGG:ath:AT2G31610 TAIR:At2g31610
HOGENOM:HOG000210611 InParanoid:Q9SIP7 KO:K02985 OMA:PEGSVEX
PhylomeDB:Q9SIP7 ProtClustDB:CLSN2683263 Genevestigator:Q9SIP7
GermOnline:AT2G31610 TIGRFAMs:TIGR01008 Uniprot:Q9SIP7
Length = 250
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 204/236 (86%), Positives = 215/236 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA 236
VLGIKVKIML WDP GK GP TPLPD+V IH+PKD+ Y P A + + +Q A
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTL-VQEA 235
>TAIR|locus:2084490 [details] [associations]
symbol:AT3G53870 species:3702 "Arabidopsis thaliana"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA;ISS] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISS;IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009651 "response to salt
stress" evidence=IEP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0009651
GO:GO:0003723 GO:GO:0003735 EMBL:AL132960 GO:GO:0022627
UniGene:At.24124 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 eggNOG:COG0092 HSSP:P23396 HOGENOM:HOG000210611
KO:K02985 ProtClustDB:CLSN2683263 TIGRFAMs:TIGR01008 EMBL:AF428405
EMBL:AY035022 EMBL:AY059090 EMBL:AY088808 IPI:IPI00527953
PIR:T45927 RefSeq:NP_190955.1 ProteinModelPortal:Q9M339 SMR:Q9M339
IntAct:Q9M339 STRING:Q9M339 PaxDb:Q9M339 PRIDE:Q9M339
EnsemblPlants:AT3G53870.1 GeneID:824554 KEGG:ath:AT3G53870
TAIR:At3g53870 InParanoid:Q9M339 OMA:TIRRIMN PhylomeDB:Q9M339
Genevestigator:Q9M339 GermOnline:AT3G53870 Uniprot:Q9M339
Length = 249
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 202/226 (89%), Positives = 209/226 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 226
VLGIKVK+ML WDP G GP TPLPD+V IHSPK+EE P VA
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVA 226
>UNIPROTKB|E2RH47 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9615 "Canis
lupus familiaris" [GO:0051059 "NF-kappaB binding" evidence=IEA]
[GO:0045738 "negative regulation of DNA repair" evidence=IEA]
[GO:0032587 "ruffle membrane" evidence=IEA] [GO:0032088 "negative
regulation of NF-kappaB transcription factor activity"
evidence=IEA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0005634 GO:GO:0006917 GO:GO:0003684
GO:GO:0006412 GO:GO:0003729 GO:GO:0006974 GO:GO:0006919
GO:GO:0003735 GO:GO:0032587 GO:GO:0004519 GO:GO:0032088
GO:GO:0003906 Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0022627
SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821 PDB:2ZKQ
PDBsum:2ZKQ KO:K02985 TIGRFAMs:TIGR01008 CTD:6188
GeneTree:ENSGT00390000008610 OMA:CNDYVET GO:GO:0045738
RefSeq:XP_534008.1 ProteinModelPortal:E2RH47 SMR:E2RH47
PRIDE:E2RH47 Ensembl:ENSCAFT00000008686 GeneID:476804
KEGG:cfa:476804 EvolutionaryTrace:E2RH47 NextBio:20852408
Uniprot:E2RH47
Length = 243
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>MGI|MGI:1350917 [details] [associations]
symbol:Rps3 "ribosomal protein S3" species:10090 "Mus
musculus" [GO:0003684 "damaged DNA binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=ISO] [GO:0004519 "endonuclease activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0012505 "endomembrane system" evidence=ISO]
[GO:0015935 "small ribosomal subunit" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=ISO]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=ISO] [GO:0032587 "ruffle membrane" evidence=ISO]
[GO:0045738 "negative regulation of DNA repair" evidence=ISO]
[GO:0051059 "NF-kappaB binding" evidence=ISO] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 MGI:MGI:1350917
GO:GO:0005634 GO:GO:0005737 GO:GO:0006917 GO:GO:0003684
GO:GO:0006412 GO:GO:0003729 GO:GO:0006974 GO:GO:0006919
GO:GO:0003735 GO:GO:0030529 GO:GO:0032587 GO:GO:0004519
GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20 InterPro:IPR015946
GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 HOVERGEN:HBG002195 OMA:CNDYVET OrthoDB:EOG4GXFNJ
GO:GO:0045738 ChiTaRS:RpS3 EMBL:X76772 EMBL:BC010721
IPI:IPI00134599 PIR:S41170 RefSeq:NP_036182.1 UniGene:Mm.236868
ProteinModelPortal:P62908 SMR:P62908 IntAct:P62908 STRING:P62908
PhosphoSite:P62908 PaxDb:P62908 PRIDE:P62908
Ensembl:ENSMUST00000032998 GeneID:27050 KEGG:mmu:27050
InParanoid:P62908 NextBio:304983 Bgee:P62908 CleanEx:MM_RPS3
Genevestigator:P62908 GermOnline:ENSMUSG00000030744 Uniprot:P62908
Length = 243
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>RGD|619888 [details] [associations]
symbol:Rps3 "ribosomal protein S3" species:10116 "Rattus
norvegicus" [GO:0003684 "damaged DNA binding" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=ISO] [GO:0003735 "structural constituent of ribosome"
evidence=IC;ISO] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=ISO] [GO:0004519 "endonuclease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006412 "translation" evidence=IC] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0012505 "endomembrane system" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0022627 "cytosolic small
ribosomal subunit" evidence=ISO;IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO;ISS] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=ISO] [GO:0032587 "ruffle
membrane" evidence=ISO] [GO:0045738 "negative regulation of DNA
repair" evidence=ISO] [GO:0051059 "NF-kappaB binding" evidence=ISO]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 RGD:619888 GO:GO:0006412 GO:GO:0030425 GO:GO:0012505
GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946
GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 GeneTree:ENSGT00390000008610 HOVERGEN:HBG002195
OMA:CNDYVET OrthoDB:EOG4GXFNJ EMBL:X51536 EMBL:BC088450
IPI:IPI00212776 PIR:S13882 RefSeq:NP_001009239.1 UniGene:Rn.127805
ProteinModelPortal:P62909 SMR:P62909 IntAct:P62909 STRING:P62909
PhosphoSite:P62909 PRIDE:P62909 Ensembl:ENSRNOT00000023935
GeneID:140654 KEGG:rno:140654 UCSC:RGD:619888 InParanoid:P62909
NextBio:620608 Genevestigator:P62909 GermOnline:ENSRNOG00000017418
Uniprot:P62909
Length = 243
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>UNIPROTKB|Q3T169 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9913 "Bos
taurus" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0051059 "NF-kappaB binding" evidence=IEA] [GO:0045738 "negative
regulation of DNA repair" evidence=IEA] [GO:0032587 "ruffle
membrane" evidence=IEA] [GO:0032088 "negative regulation of
NF-kappaB transcription factor activity" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic
site) lyase activity" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0030529
GO:GO:0032587 GO:GO:0004519 GO:GO:0032088 GO:GO:0003906
Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 EMBL:BC102090
IPI:IPI00685601 RefSeq:NP_001029219.1 UniGene:Bt.15460
ProteinModelPortal:Q3T169 SMR:Q3T169 STRING:Q3T169 PRIDE:Q3T169
Ensembl:ENSBTAT00000003962 GeneID:326588 KEGG:bta:326588 CTD:6188
GeneTree:ENSGT00390000008610 HOVERGEN:HBG002195 InParanoid:Q3T169
OMA:CNDYVET OrthoDB:EOG4GXFNJ NextBio:20809658 ArrayExpress:Q3T169
GO:GO:0045738 Uniprot:Q3T169
Length = 243
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 186/216 (86%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>UNIPROTKB|P23396 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=NAS;IDA] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=IDA] [GO:0045738 "negative regulation of DNA repair"
evidence=IMP] [GO:0032088 "negative regulation of NF-kappaB
transcription factor activity" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0004519 "endonuclease activity" evidence=IMP]
[GO:0019901 "protein kinase binding" evidence=IPI] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006917 "induction of apoptosis"
evidence=IDA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0051536 "iron-sulfur cluster binding" evidence=NAS] [GO:0006412
"translation" evidence=IC;NAS;TAS] [GO:0006413 "translational
initiation" evidence=NAS;TAS] [GO:0003729 "mRNA binding"
evidence=IDA] [GO:0051059 "NF-kappaB binding" evidence=IPI]
[GO:0006974 "response to DNA damage stimulus" evidence=IEP]
[GO:0003684 "damaged DNA binding" evidence=IDA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0032587 "ruffle membrane" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0006917
GO:GO:0000184 GO:GO:0003684 GO:GO:0006413 EMBL:CH471076
GO:GO:0003729 GO:GO:0006974 GO:GO:0051536 GO:GO:0006919
GO:GO:0003735 GO:GO:0032587 GO:GO:0004519 GO:GO:0032088
GO:GO:0003906 GO:GO:0006415 Gene3D:3.30.300.20 InterPro:IPR015946
GO:GO:0006414 GO:GO:0022627 Reactome:REACT_1762 SUPFAM:SSF54814
GO:GO:0006614 GO:GO:0019083 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 HOVERGEN:HBG002195 OrthoDB:EOG4GXFNJ GO:GO:0045738
ChiTaRS:RpS3 EMBL:U14990 EMBL:U14991 EMBL:U14992 EMBL:X55715
EMBL:S42658 EMBL:AB061838 EMBL:AY791291 EMBL:AK313051 EMBL:BC003137
EMBL:BC003577 EMBL:BC013196 EMBL:BC034149 EMBL:BC071917
EMBL:BC100284 EMBL:L16016 EMBL:AB062288 IPI:IPI00011253 PIR:A41247
RefSeq:NP_000996.2 RefSeq:NP_001243731.1 RefSeq:NP_001247436.1
UniGene:Hs.546286 UniGene:Hs.740358 PDB:1WH9 PDBsum:1WH9
ProteinModelPortal:P23396 SMR:P23396 IntAct:P23396
MINT:MINT-4999144 STRING:P23396 PhosphoSite:P23396 DMDM:417719
PaxDb:P23396 PeptideAtlas:P23396 PRIDE:P23396 DNASU:6188
Ensembl:ENST00000524851 Ensembl:ENST00000527446
Ensembl:ENST00000531188 GeneID:6188 KEGG:hsa:6188 UCSC:uc001owh.3
GeneCards:GC11P075110 HGNC:HGNC:10420 MIM:600454 neXtProt:NX_P23396
PharmGKB:PA34829 InParanoid:P23396 PhylomeDB:P23396
EvolutionaryTrace:P23396 GenomeRNAi:6188 NextBio:24029
ArrayExpress:P23396 Bgee:P23396 CleanEx:HS_RPS3
Genevestigator:P23396 GermOnline:ENSG00000149273 Uniprot:P23396
Length = 243
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 186/216 (86%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>UNIPROTKB|Q0Z8U2 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 GO:GO:0030529 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
CTD:6188 HOVERGEN:HBG002195 OrthoDB:EOG4GXFNJ EMBL:DQ660373
RefSeq:NP_001038066.1 UniGene:Ssc.53888 ProteinModelPortal:Q0Z8U2
SMR:Q0Z8U2 STRING:Q0Z8U2 PRIDE:Q0Z8U2 GeneID:733671 KEGG:ssc:733671
Uniprot:Q0Z8U2
Length = 243
Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
Identities = 186/216 (86%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>UNIPROTKB|F1N9X5 [details] [associations]
symbol:RPS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0045738 "negative regulation of DNA repair" evidence=IEA]
[GO:0051059 "NF-kappaB binding" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0032587
GO:GO:0004519 GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20
InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 OMA:CNDYVET GO:GO:0045738
EMBL:AADN02055154 IPI:IPI00602924 PRIDE:F1N9X5
Ensembl:ENSGALT00000036364 ArrayExpress:F1N9X5 Uniprot:F1N9X5
Length = 243
Score = 925 (330.7 bits), Expect = 7.0e-93, P = 7.0e-93
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>UNIPROTKB|Q5R465 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9601 "Pongo
abelii" [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
GO:GO:0030529 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 KO:K02985
TIGRFAMs:TIGR01008 CTD:6188 HOVERGEN:HBG002195 EMBL:CR861393
RefSeq:NP_001127020.1 UniGene:Pab.18462 ProteinModelPortal:Q5R465
PRIDE:Q5R465 GeneID:100174045 KEGG:pon:100174045 InParanoid:Q5R465
Uniprot:Q5R465
Length = 243
Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>ZFIN|ZDB-GENE-030131-8494 [details] [associations]
symbol:rps3 "ribosomal protein S3" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0009790 "embryo development"
evidence=IMP] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 ZFIN:ZDB-GENE-030131-8494 GO:GO:0006412 GO:GO:0003723
GO:GO:0009790 GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
KO:K02985 TIGRFAMs:TIGR01008 CTD:6188 HOVERGEN:HBG002195
EMBL:BC045902 IPI:IPI00507986 RefSeq:NP_957447.1 UniGene:Dr.65656
ProteinModelPortal:Q7ZVD9 SMR:Q7ZVD9 STRING:Q7ZVD9 GeneID:336550
KEGG:dre:336550 InParanoid:Q7ZVD9 NextBio:20811799
ArrayExpress:Q7ZVD9 Uniprot:Q7ZVD9
Length = 245
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 183/216 (84%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>RGD|1560831 [details] [associations]
symbol:RGD1560831 "similar to 40S ribosomal protein S3"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0015935
"small ribosomal subunit" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 RGD:1560831
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 OrthoDB:EOG4GXFNJ IPI:IPI00195999
RefSeq:XP_001057158.1 RefSeq:XP_575143.1 PRIDE:D3ZVH2
Ensembl:ENSRNOT00000009988 GeneID:499803 KEGG:rno:499803
UCSC:RGD:1560831 CTD:499803 OMA:RITENTT NextBio:704057
Uniprot:D3ZVH2
Length = 243
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 179/216 (82%), Positives = 190/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYS VEVRVTP RTEIII TRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK+F FPE SVELYAEKV GLCAIAQAESL YKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGA+GCEV+VSGKLR QRAKS+KF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAEGCEVVVSGKLRGQRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>UNIPROTKB|J3KN86 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0006412
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 KO:K02985 CTD:6188 OMA:CNDYVET ChiTaRS:RpS3
UniGene:Hs.546286 UniGene:Hs.740358 GeneID:6188 KEGG:hsa:6188
HGNC:HGNC:10420 EMBL:AP000744 RefSeq:NP_001247435.1
ProteinModelPortal:J3KN86 Ensembl:ENST00000278572 Uniprot:J3KN86
Length = 259
Score = 889 (318.0 bits), Expect = 4.6e-89, P = 4.6e-89
Identities = 186/232 (80%), Positives = 193/232 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVEL----------------YAEKVNNRGLCAIAQAES 104
EKGRRIRELT+VVQKRF FPE SVEL YAEKV RGLCAIAQAES
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAES 120
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPV 164
LRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PV
Sbjct: 121 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 180
Query: 165 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
N Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 232
>UNIPROTKB|F1NPA9 [details] [associations]
symbol:RPS3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003729 "mRNA binding"
evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0032088 "negative regulation of NF-kappaB transcription factor
activity" evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0045738 "negative regulation of DNA repair" evidence=IEA]
[GO:0051059 "NF-kappaB binding" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0005634
GO:GO:0006917 GO:GO:0003684 GO:GO:0006412 GO:GO:0003729
GO:GO:0006974 GO:GO:0006919 GO:GO:0003735 GO:GO:0032587
GO:GO:0004519 GO:GO:0032088 GO:GO:0003906 Gene3D:3.30.300.20
InterPro:IPR015946 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 GO:GO:0045738 EMBL:AADN02055154
IPI:IPI00822610 Ensembl:ENSGALT00000028006 ArrayExpress:F1NPA9
Uniprot:F1NPA9
Length = 211
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 176/206 (85%), Positives = 185/206 (89%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V+I PK+E
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKEE 206
>UNIPROTKB|G4MP11 [details] [associations]
symbol:MGG_05673 "40S ribosomal protein S3" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:CM001231 GO:GO:0043581 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 KO:K02985
TIGRFAMs:TIGR01008 RefSeq:XP_003710572.1 ProteinModelPortal:G4MP11
SMR:G4MP11 EnsemblFungi:MGG_05673T0 GeneID:2675978
KEGG:mgr:MGG_05673 Uniprot:G4MP11
Length = 262
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 170/221 (76%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 AAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFP +SV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 66 QGRRIRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 126 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 185
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ V+P
Sbjct: 186 LGIKVKIMRGSDPEGKAGPQKSLPDAVTILEPKEEQPVVQP 226
>FB|FBgn0002622 [details] [associations]
symbol:RpS3 "Ribosomal protein S3" species:7227 "Drosophila
melanogaster" [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0003906 "DNA-(apurinic or apyrimidinic site) lyase activity"
evidence=NAS;IDA] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0006281 "DNA repair" evidence=IGI;NAS] [GO:0008534 "oxidized
purine nucleobase lesion DNA N-glycosylase activity" evidence=IDA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=ISS;NAS]
[GO:0003735 "structural constituent of ribosome"
evidence=ISS;IDA;NAS] [GO:0006412 "translation" evidence=ISS;NAS]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0005840 "ribosome"
evidence=IDA;NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 EMBL:AE014297
GO:GO:0005875 GO:GO:0007067 GO:GO:0005811 GO:GO:0006412
GO:GO:0006281 GO:GO:0043524 GO:GO:0003723 GO:GO:0005840
GO:GO:0003735 GO:GO:0090305 GO:GO:0004519 GO:GO:0016363
Gene3D:3.30.300.20 InterPro:IPR015946 GO:GO:0008534 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
KO:K02985 TIGRFAMs:TIGR01008 CTD:6188 GeneTree:ENSGT00390000008610
OMA:CNDYVET EMBL:L13690 EMBL:X72921 EMBL:AY118971 PIR:S35620
RefSeq:NP_476632.1 UniGene:Dm.20234 ProteinModelPortal:Q06559
SMR:Q06559 DIP:DIP-17168N IntAct:Q06559 MINT:MINT-812597
STRING:Q06559 PaxDb:Q06559 PRIDE:Q06559 EnsemblMetazoa:FBtr0084410
GeneID:42761 KEGG:dme:Dmel_CG6779 FlyBase:FBgn0002622
InParanoid:Q06559 OrthoDB:EOG4SQVCP PhylomeDB:Q06559 ChiTaRS:RpS3
GenomeRNAi:42761 NextBio:830438 Bgee:Q06559 GermOnline:CG6779
Uniprot:Q06559
Length = 246
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 169/228 (74%), Positives = 191/228 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPE---TEYKIP 231
>UNIPROTKB|E9PL09 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
TIGRFAMs:TIGR01008 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00978298 ProteinModelPortal:E9PL09 SMR:E9PL09 PRIDE:E9PL09
Ensembl:ENST00000526608 ArrayExpress:E9PL09 Bgee:E9PL09
Uniprot:E9PL09
Length = 231
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 176/216 (81%), Positives = 183/216 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE S LCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGS------------LCAIAQAESLRYKLLGGLAVRRACY 108
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 109 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 168
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 169 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 204
>POMBASE|SPBC16G5.14c [details] [associations]
symbol:rps3 "40S ribosomal protein S3 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022627 "cytosolic small ribosomal subunit"
evidence=ISO] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 PomBase:SPBC16G5.14c EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
OMA:YRIANAM EMBL:AB264328 PIR:T39606 RefSeq:NP_596763.1
ProteinModelPortal:O60128 SMR:O60128 IntAct:O60128 STRING:O60128
PRIDE:O60128 EnsemblFungi:SPBC16G5.14c.1 GeneID:2539797
KEGG:spo:SPBC16G5.14c OrthoDB:EOG4GTPP2 NextBio:20800946
Uniprot:O60128
Length = 249
Score = 834 (298.6 bits), Expect = 3.1e-83, P = 3.1e-83
Identities = 168/235 (71%), Positives = 195/235 (82%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 64 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 124 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGV 183
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA 236
LG+KVKIML +P +Q + LPD+V + PK+EE KP V I P++ A
Sbjct: 184 LGVKVKIMLP-EPKTRQKKS--LPDIVVVLDPKEEEPITKPYTV---INQPVEAA 232
>ASPGD|ASPL0000016707 [details] [associations]
symbol:AN4087 species:162425 "Emericella nidulans"
[GO:0006407 "rRNA export from nucleus" evidence=IEA] [GO:0000056
"ribosomal small subunit export from nucleus" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0030688
"preribosome, small subunit precursor" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 GO:GO:0006412 GO:GO:0003723 EMBL:BN001302
GO:GO:0003735 SUPFAM:SSF54814 GO:GO:0015935 EMBL:AACD01000066
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 OMA:YRIANAM
OrthoDB:EOG4GTPP2 RefSeq:XP_661691.1 ProteinModelPortal:Q5B5U3
SMR:Q5B5U3 STRING:Q5B5U3 EnsemblFungi:CADANIAT00004594
GeneID:2873506 KEGG:ani:AN4087.2 Uniprot:Q5B5U3
Length = 264
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 166/218 (76%), Positives = 182/218 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+I T TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDI--STTHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 66 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 126 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 186 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 223
>WB|WBGene00004472 [details] [associations]
symbol:rps-3 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0015935 "small ribosomal subunit"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005703 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0006915 GO:GO:0002119 GO:GO:0006412
GO:GO:0018996 GO:GO:0000003 GO:GO:0003723 GO:GO:0019915
GO:GO:0003735 Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
GO:GO:0015935 EMBL:FO080630 Gene3D:3.30.1140.32 SUPFAM:SSF54821
eggNOG:COG0092 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
GeneTree:ENSGT00390000008610 OMA:CNDYVET PIR:T15579
RefSeq:NP_498349.1 ProteinModelPortal:P48152 SMR:P48152
DIP:DIP-25651N IntAct:P48152 MINT:MINT-1039773 STRING:P48152
PaxDb:P48152 PRIDE:P48152 EnsemblMetazoa:C23G10.3.1
EnsemblMetazoa:C23G10.3.2 EnsemblMetazoa:C23G10.3.3 GeneID:175879
KEGG:cel:CELE_C23G10.3 UCSC:C23G10.3.1 CTD:175879 WormBase:C23G10.3
InParanoid:P48152 NextBio:890122 Uniprot:P48152
Length = 247
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 162/232 (69%), Positives = 186/232 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVP 232
KVKIML +DP G+ GP LPD V I P++E E + + D++VP
Sbjct: 187 KVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHKEEKKDVQVP 238
>SGD|S000005122 [details] [associations]
symbol:RPS3 "Protein component of the small (40S) ribosomal
subunit, has apurinic/" species:4932 "Saccharomyces cerevisiae"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0030688 "preribosome,
small subunit precursor" evidence=IDA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0000056 "ribosomal small subunit export from nucleus"
evidence=IGI] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0002181 "cytoplasmic translation" evidence=IC] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0006407 "rRNA
export from nucleus" evidence=IMP] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 SGD:S000005122
EMBL:BK006947 GO:GO:0003723 GO:GO:0003735 GO:GO:0002181
GO:GO:0003906 KO:K03348 RefSeq:NP_014227.4 GeneID:855549
KEGG:sce:YNL172W GO:GO:0000056 GO:GO:0030686 PDB:1S1H PDBsum:1S1H
GO:GO:0022627 GO:GO:0030688 SUPFAM:SSF54814 PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3U5C PDB:3U5G PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30
PDBsum:3U5C PDBsum:3U5G GO:GO:0006407 Gene3D:3.30.1140.32
SUPFAM:SSF54821 eggNOG:COG0092 PDB:1K5X PDBsum:1K5X
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008 OMA:YRIANAM
GeneTree:ENSGT00390000008610 OrthoDB:EOG4GTPP2 EMBL:U34347
EMBL:D25285 EMBL:L31405 EMBL:Z71454 PIR:S48510 RefSeq:NP_014221.3
ProteinModelPortal:P05750 SMR:P05750 DIP:DIP-4328N IntAct:P05750
MINT:MINT-512497 STRING:P05750 UCD-2DPAGE:P05750 PaxDb:P05750
PeptideAtlas:P05750 PRIDE:P05750 EnsemblFungi:YNL178W GeneID:855543
KEGG:sce:YNL178W EvolutionaryTrace:P05750 NextBio:979610
Genevestigator:P05750 GermOnline:YNL178W Uniprot:P05750
Length = 240
Score = 781 (280.0 bits), Expect = 1.3e-77, P = 1.3e-77
Identities = 154/225 (68%), Positives = 187/225 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + GP LPD VTI PK+EE + P++
Sbjct: 181 VLGIKVKIMR--DPAKSRTGPKA-LPDAVTIIEPKEEEPILAPSV 222
>GENEDB_PFALCIPARUM|PF14_0627 [details] [associations]
symbol:PF14_0627 "ribosomal protein S3,
putative" species:5833 "Plasmodium falciparum" [GO:0022627
"cytosolic small ribosomal subunit" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005703 InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AE014187 GO:GO:0022627 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 HOGENOM:HOG000210611 KO:K02985
TIGRFAMs:TIGR01008 OMA:CNDYVET ProtClustDB:PTZ00084
RefSeq:XP_001348801.1 ProteinModelPortal:Q8IKH8 SMR:Q8IKH8
PRIDE:Q8IKH8 EnsemblProtists:PF14_0627:mRNA GeneID:812209
KEGG:pfa:PF14_0627 EuPathDB:PlasmoDB:PF3D7_1465900 Uniprot:Q8IKH8
Length = 221
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 154/217 (70%), Positives = 182/217 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY++S+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GVLGIKVKIML + + G T+ LPD +++ PK +
Sbjct: 181 GVLGIKVKIMLPTAIDTRTGLTSILPDNISVLEPKTD 217
>UNIPROTKB|Q8IKH8 [details] [associations]
symbol:PF14_0627 "40S ribosomal protein S3, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022627 "cytosolic
small ribosomal subunit" evidence=ISS] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 GO:GO:0003723 GO:GO:0003735
EMBL:AE014187 GO:GO:0022627 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
OMA:CNDYVET ProtClustDB:PTZ00084 RefSeq:XP_001348801.1
ProteinModelPortal:Q8IKH8 SMR:Q8IKH8 PRIDE:Q8IKH8
EnsemblProtists:PF14_0627:mRNA GeneID:812209 KEGG:pfa:PF14_0627
EuPathDB:PlasmoDB:PF3D7_1465900 Uniprot:Q8IKH8
Length = 221
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 154/217 (70%), Positives = 182/217 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY++S+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GVLGIKVKIML + + G T+ LPD +++ PK +
Sbjct: 181 GVLGIKVKIMLPTAIDTRTGLTSILPDNISVLEPKTD 217
>UNIPROTKB|F1SUM7 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9823 "Sus
scrofa" [GO:0015935 "small ribosomal subunit" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001351 InterPro:IPR005703
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 PROSITE:PS00548
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF54814
GO:GO:0015935 Gene3D:3.30.1140.32 SUPFAM:SSF54821
TIGRFAMs:TIGR01008 OMA:TIRRIMN GeneTree:ENSGT00390000008610
EMBL:CU655994 Ensembl:ENSSSCT00000016207 Uniprot:F1SUM7
Length = 195
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 142/167 (85%), Positives = 148/167 (88%)
Query: 50 IRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKL 109
I ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKL
Sbjct: 2 ILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKL 61
Query: 110 LGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYID 169
LGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D
Sbjct: 62 LGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGVMIHSGDPVNYYVD 121
Query: 170 SAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 122 TAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 168
>DICTYBASE|DDB_G0293000 [details] [associations]
symbol:rps3 "40S ribosomal protein S3" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0015935 "small
ribosomal subunit" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005703
InterPro:IPR009019 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 dictyBase:DDB_G0293000 GO:GO:0005615
GO:GO:0045335 GenomeReviews:CM000155_GR GO:GO:0006412 GO:GO:0003723
GO:GO:0003735 EMBL:AAFI02000199 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092 HSSP:P23396
KO:K02985 TIGRFAMs:TIGR01008 OMA:CNDYVET EMBL:U78756
RefSeq:XP_629347.1 ProteinModelPortal:P90526 SMR:P90526
STRING:P90526 PRIDE:P90526 EnsemblProtists:DDB0201667
GeneID:8629071 KEGG:ddi:DDB_G0293000 InParanoid:P90526
ProtClustDB:PTZ00084 Uniprot:P90526
Length = 218
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 140/210 (66%), Positives = 165/210 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 6 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPN 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY +
Sbjct: 66 ARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAI 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
+ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYM+ SGQP ++ID A RHVLLRQG L
Sbjct: 126 VHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTL 185
Query: 183 GIKVKIMLSWDPNGK-QGPTT-PLPDLVTI 210
G+KV IML +D K G P PD+V I
Sbjct: 186 GVKVAIMLPYDETRKIHGACNIPQPDVVVI 215
>CGD|CAL0001259 [details] [associations]
symbol:RPS3 species:5476 "Candida albicans" [GO:0003906
"DNA-(apurinic or apyrimidinic site) lyase activity" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0030688
"preribosome, small subunit precursor" evidence=IEA] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IEA] [GO:0006407 "rRNA
export from nucleus" evidence=IEA] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR005703 InterPro:IPR009019
Pfam:PF00189 Pfam:PF07650 PROSITE:PS50823 CGD:CAL0001259
GO:GO:0006412 GO:GO:0003723 GO:GO:0003735 SUPFAM:SSF54814
GO:GO:0015935 EMBL:AACQ01000214 EMBL:AACQ01000213
Gene3D:3.30.1140.32 SUPFAM:SSF54821 eggNOG:COG0092
HOGENOM:HOG000210611 KO:K02985 TIGRFAMs:TIGR01008
RefSeq:XP_711097.1 RefSeq:XP_711114.1 ProteinModelPortal:Q59N00
SMR:Q59N00 STRING:Q59N00 GeneID:3647287 GeneID:3647299
KEGG:cal:CaO19.13689 KEGG:cal:CaO19.6312 Uniprot:Q59N00
Length = 251
Score = 674 (242.3 bits), Expect = 2.8e-66, P = 2.8e-66
Identities = 136/222 (61%), Positives = 168/222 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQ-GPTTPLPDLVTIHSPKDEEEYVK-PTL 224
KVKIM DP + GP LPD V I KDE+E + PT+
Sbjct: 186 KVKIMK--DPAANRFGPRA-LPDAVKIAEAKDEDEVIPAPTV 224
>UNIPROTKB|H0YEU2 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 PROSITE:PS00548 GO:GO:0006412 GO:GO:0003723
GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54814 Gene3D:3.30.1140.32
SUPFAM:SSF54821 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
PRIDE:H0YEU2 Ensembl:ENST00000525933 Bgee:H0YEU2 Uniprot:H0YEU2
Length = 171
Score = 421 (153.3 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 81/100 (81%), Positives = 86/100 (86%)
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVL
Sbjct: 45 RACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVL 104
Query: 177 LRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
LRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 105 LRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 144
Score = 188 (71.2 bits), Expect = 1.6e-57, Sum P(2) = 1.6e-57
Identities = 39/44 (88%), Positives = 40/44 (90%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATR 54
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATR
Sbjct: 2 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATR 45
>UNIPROTKB|E9PL45 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 SMART:SM00322
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814
Gene3D:3.30.1140.32 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00978911 ProteinModelPortal:E9PL45 SMR:E9PL45 PRIDE:E9PL45
Ensembl:ENST00000530689 ArrayExpress:E9PL45 Bgee:E9PL45
Uniprot:E9PL45
Length = 164
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 117/128 (91%), Positives = 119/128 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIME 128
GVLRFIME
Sbjct: 121 GVLRFIME 128
>UNIPROTKB|E9PPU1 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00984887 ProteinModelPortal:E9PPU1 SMR:E9PPU1 PRIDE:E9PPU1
Ensembl:ENST00000534440 ArrayExpress:E9PPU1 Bgee:E9PPU1
Uniprot:E9PPU1
Length = 158
Score = 410 (149.4 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 85/99 (85%), Positives = 88/99 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAI 99
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG+ I
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGVLGI 99
Score = 144 (55.7 bits), Expect = 9.9e-52, Sum P(2) = 9.9e-52
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 179 QGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
+GVLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 94 RGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 131
>UNIPROTKB|D4AAX0 [details] [associations]
symbol:D4AAX0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR001351 InterPro:IPR009019 GO:GO:0006412
GO:GO:0003723 GO:GO:0005840 GO:GO:0003735 SUPFAM:SSF54814
Gene3D:3.30.1140.32 SUPFAM:SSF54821 GeneTree:ENSGT00390000008610
EMBL:AC111678 IPI:IPI00391156 Ensembl:ENSRNOT00000038678
Uniprot:D4AAX0
Length = 222
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 124/197 (62%), Positives = 141/197 (71%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISK RK VA+G+F AELNE LT+ELAEDG+SGVEV VT RTEI I ATRTQ+VLG
Sbjct: 1 MAMQISKNRKSVAEGIFKAELNEFLTQELAEDGHSGVEVWVTLTRTEINISATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG IR + V QKRF FPE ++EL AEKV R LCA QAES YKLLG LA+R AC
Sbjct: 61 EKGHGIRSIAGV-QKRFCFPEGNLELCAEKVAMRSLCAFVQAESAGYKLLGRLALR-ACC 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
L FIME GAKGCEV+V+GKL+ K D VN Y+D+ V HVLLRQG
Sbjct: 119 SELWFIMERGAKGCEVVVTGKLQ-----DCKRAD---------VNYYVDTCVCHVLLRQG 164
Query: 181 VLGIKVKIMLSWDPNGK 197
+L IKVK+ML WDP+GK
Sbjct: 165 MLSIKVKLMLPWDPSGK 181
>UNIPROTKB|F2Z2S8 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 SMART:SM00322
GO:GO:0005737 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00979604 ProteinModelPortal:F2Z2S8 SMR:F2Z2S8 PRIDE:F2Z2S8
Ensembl:ENST00000530164 UCSC:uc001owg.3 ArrayExpress:F2Z2S8
Bgee:F2Z2S8 Uniprot:F2Z2S8
Length = 117
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 106/117 (90%), Positives = 108/117 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>UNIPROTKB|H0YCJ7 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
PRIDE:H0YCJ7 Ensembl:ENST00000526248 Bgee:H0YCJ7 Uniprot:H0YCJ7
Length = 135
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 104/114 (91%), Positives = 106/114 (92%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKG
Sbjct: 1 QISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKG 60
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 RRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 114
>UNIPROTKB|H0YF32 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823
SMART:SM00322 GO:GO:0003723 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
PRIDE:H0YF32 Ensembl:ENST00000530170 Bgee:H0YF32 Uniprot:H0YF32
Length = 123
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 98/110 (89%), Positives = 100/110 (90%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+
Sbjct: 2 VADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTA 61
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR C G
Sbjct: 62 VVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR-CAG 110
>UNIPROTKB|E9PJH4 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00977579
ProteinModelPortal:E9PJH4 SMR:E9PJH4 PRIDE:E9PJH4
Ensembl:ENST00000532872 ArrayExpress:E9PJH4 Bgee:E9PJH4
Uniprot:E9PJH4
Length = 115
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>UNIPROTKB|E9PQ96 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00980283
ProteinModelPortal:E9PQ96 SMR:E9PQ96 PRIDE:E9PQ96
Ensembl:ENST00000528439 ArrayExpress:E9PQ96 Bgee:E9PQ96
Uniprot:E9PQ96
Length = 91
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>UNIPROTKB|E9PSF4 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
InterPro:IPR001351 InterPro:IPR018280 Pfam:PF00189 PROSITE:PS00548
GO:GO:0006412 GO:GO:0003723 GO:GO:0005840 GO:GO:0003735
Gene3D:3.30.1140.32 SUPFAM:SSF54821 ChiTaRS:RpS3 HGNC:HGNC:10420
EMBL:AP000744 IPI:IPI00939811 ProteinModelPortal:E9PSF4 SMR:E9PSF4
PRIDE:E9PSF4 Ensembl:ENST00000422465 ArrayExpress:E9PSF4
Bgee:E9PSF4 Uniprot:E9PSF4
Length = 103
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 71/90 (78%), Positives = 76/90 (84%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KIML WDP GK GP PLPD V+I PKDE
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 90
>UNIPROTKB|E9PK82 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004044
InterPro:IPR009019 Pfam:PF07650 PROSITE:PS50823 GO:GO:0003723
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 ChiTaRS:RpS3
HGNC:HGNC:10420 EMBL:AP000744 IPI:IPI00981193
ProteinModelPortal:E9PK82 SMR:E9PK82 PRIDE:E9PK82
Ensembl:ENST00000527273 ArrayExpress:E9PK82 Bgee:E9PK82
Uniprot:E9PK82
Length = 128
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 69/76 (90%), Positives = 71/76 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKR 76
EKGRRIRELT+VVQKR
Sbjct: 61 EKGRRIRELTAVVQKR 76
>UNIPROTKB|E9PJN9 [details] [associations]
symbol:RPS3 "40S ribosomal protein S3" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001351 Pfam:PF00189
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:3.30.1140.32
SUPFAM:SSF54821 ChiTaRS:RpS3 HGNC:HGNC:10420 EMBL:AP000744
IPI:IPI00855830 ProteinModelPortal:E9PJN9 SMR:E9PJN9
Ensembl:ENST00000528847 ArrayExpress:E9PJN9 Bgee:E9PJN9
Uniprot:E9PJN9
Length = 36
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSG 161
MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSG 35
>TIGR_CMR|CBU_0244 [details] [associations]
symbol:CBU_0244 "ribosomal protein S3" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
EMBL:AF064946 Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:NP_819288.1
ProteinModelPortal:O85388 SMR:O85388 GeneID:1208125
KEGG:cbu:CBU_0244 PATRIC:17929181
BioCyc:CBUR227377:GJ7S-250-MONOMER Uniprot:O85388
Length = 227
Score = 139 (54.0 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 64/220 (29%), Positives = 104/220 (47%)
Query: 13 ADGVFFAE-LNEVLT-RELAEDGYSGVEV-RVT---PMRT-EIIIRATRTQNVLGEKGRR 65
AD FA+ LNE L R+L + G V R+ P R +III + R ++G+KG
Sbjct: 24 ADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKGGE 83
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
I L + K K P V + E+V L A AE++ +L + RRA ++
Sbjct: 84 IEALRDEIFKVMKVP---VHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAVQN 140
Query: 126 IMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGV 181
+ GA G ++ VSG+L A+ A++ +++G + P++ + ID A G+
Sbjct: 141 TLRQGALGVKISVSGRLGGAEIARTEWYREGRV-----PLHTFRADIDYATASAKTTYGI 195
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
+G+KV W G+ P + +P++ EE VK
Sbjct: 196 IGVKV-----WIFKGEVHAPKPQAEEA---APQETEEEVK 227
>UNIPROTKB|Q9KNZ0 [details] [associations]
symbol:rpsC "30S ribosomal protein S3" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 KO:K02982 eggNOG:COG0092 OMA:MGQKTNP
ProtClustDB:PRK00310 PIR:H82058 RefSeq:NP_232218.1
ProteinModelPortal:Q9KNZ0 SMR:Q9KNZ0 PRIDE:Q9KNZ0 DNASU:2615607
GeneID:2615607 KEGG:vch:VC2590 PATRIC:20084206 Uniprot:Q9KNZ0
Length = 233
Score = 134 (52.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 53/192 (27%), Positives = 91/192 (47%)
Query: 2 ATQISKKRKFV--ADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
AT + + F DG F ++ + L++ELA S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQYLSKELANASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVL 176
A +R GAKG +V VSG+L A+ A+S +++G + + ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRVPL--HTLRADIDYATSSAH 190
Query: 177 LRQGVLGIKVKI 188
GV+G+KV I
Sbjct: 191 TTYGVIGVKVWI 202
>TIGR_CMR|VC_2590 [details] [associations]
symbol:VC_2590 "ribosomal protein S3" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 HAMAP:MF_01309_B
SUPFAM:SSF54821 TIGRFAMs:TIGR01009 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 PIR:H82058 RefSeq:NP_232218.1
ProteinModelPortal:Q9KNZ0 SMR:Q9KNZ0 PRIDE:Q9KNZ0 DNASU:2615607
GeneID:2615607 KEGG:vch:VC2590 PATRIC:20084206 Uniprot:Q9KNZ0
Length = 233
Score = 134 (52.2 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 53/192 (27%), Positives = 91/192 (47%)
Query: 2 ATQISKKRKFV--ADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
AT + + F DG F ++ + L++ELA S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQYLSKELANASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVL 176
A +R GAKG +V VSG+L A+ A+S +++G + + ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRVPL--HTLRADIDYATSSAH 190
Query: 177 LRQGVLGIKVKI 188
GV+G+KV I
Sbjct: 191 TTYGVIGVKVWI 202
>UNIPROTKB|P0A7V3 [details] [associations]
symbol:rpsC species:83333 "Escherichia coli K-12"
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IDA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 EMBL:U18997 GO:GO:0003735
GO:GO:0019843 PDB:3J00 PDBsum:3J00 Gene3D:3.30.300.20
InterPro:IPR015946 PDB:3FIH PDB:3IZV PDB:3IZW PDBsum:3FIH
PDBsum:3IZV PDBsum:3IZW GO:GO:0022627 SUPFAM:SSF54814 PDB:3SFS
PDB:3UOQ PDBsum:3SFS PDBsum:3UOQ EMBL:X02613 Gene3D:3.30.1140.32
HAMAP:MF_01309_B SUPFAM:SSF54821 TIGRFAMs:TIGR01009
HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092 PDB:4GAS PDB:4GD1
PDBsum:4GAS PDBsum:4GD1 PDB:1M5G PDB:1P6G PDB:1P87 PDB:1VS5
PDB:1VS7 PDB:2AVY PDB:2AW7 PDB:2GY9 PDB:2GYB PDB:2I2P PDB:2I2U
PDB:2QAL PDB:2QAN PDB:2QB9 PDB:2QBB PDB:2QBD PDB:2QBF PDB:2QBH
PDB:2QBJ PDB:2QOU PDB:2QOW PDB:2QOY PDB:2QP0 PDB:2VHO PDB:2VHP
PDB:2WWL PDB:2YKR PDB:2Z4K PDB:2Z4M PDB:3DF1 PDB:3DF3 PDB:3E1A
PDB:3E1C PDB:3I1M PDB:3I1O PDB:3I1Q PDB:3I1S PDB:3I1Z PDB:3I21
PDB:3J0U PDB:3J0V PDB:3J0X PDB:3J0Z PDB:3J10 PDB:3J13 PDB:3J18
PDB:3KC4 PDB:3OAQ PDB:3OAR PDB:3OFA PDB:3OFB PDB:3OFO PDB:3OFP
PDB:3OFX PDB:3OFY PDB:3OR9 PDB:3ORA PDB:4A2I PDB:4ADV PDB:4GAQ
PDB:4GD2 PDBsum:1M5G PDBsum:1P6G PDBsum:1P87 PDBsum:1VS5
PDBsum:1VS7 PDBsum:2AVY PDBsum:2AW7 PDBsum:2GY9 PDBsum:2GYB
PDBsum:2I2P PDBsum:2I2U PDBsum:2QAL PDBsum:2QAN PDBsum:2QB9
PDBsum:2QBB PDBsum:2QBD PDBsum:2QBF PDBsum:2QBH PDBsum:2QBJ
PDBsum:2QOU PDBsum:2QOW PDBsum:2QOY PDBsum:2QP0 PDBsum:2VHO
PDBsum:2VHP PDBsum:2WWL PDBsum:2YKR PDBsum:2Z4K PDBsum:2Z4M
PDBsum:3DF1 PDBsum:3DF3 PDBsum:3E1A PDBsum:3E1C PDBsum:3I1M
PDBsum:3I1O PDBsum:3I1Q PDBsum:3I1S PDBsum:3I1Z PDBsum:3I21
PDBsum:3J0U PDBsum:3J0V PDBsum:3J0X PDBsum:3J0Z PDBsum:3J10
PDBsum:3J13 PDBsum:3J18 PDBsum:3KC4 PDBsum:3OAQ PDBsum:3OAR
PDBsum:3OFA PDBsum:3OFB PDBsum:3OFO PDBsum:3OFP PDBsum:3OFX
PDBsum:3OFY PDBsum:3OR9 PDBsum:3ORA PDBsum:4A2I PDBsum:4ADV
PDBsum:4GAQ PDBsum:4GD2 OMA:MGQKTNP ProtClustDB:PRK00310 PIR:H23129
RefSeq:NP_417773.1 RefSeq:YP_492118.1 ProteinModelPortal:P0A7V3
SMR:P0A7V3 DIP:DIP-35807N IntAct:P0A7V3 PaxDb:P0A7V3 PRIDE:P0A7V3
EnsemblBacteria:EBESCT00000002180 EnsemblBacteria:EBESCT00000016265
GeneID:12932292 GeneID:947814 KEGG:ecj:Y75_p3862 KEGG:eco:b3314
PATRIC:32122060 EchoBASE:EB0895 EcoGene:EG10902
BioCyc:EcoCyc:EG10902-MONOMER BioCyc:ECOL316407:JW3276-MONOMER
EvolutionaryTrace:P0A7V3 Genevestigator:P0A7V3 Uniprot:P0A7V3
Length = 233
Score = 124 (48.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 46/170 (27%), Positives = 79/170 (46%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + LT+ELA+ S + + + I R V+G+KG + +L VV
Sbjct: 38 KVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P ++ +V L A A+S+ +L + RRA ++ M GAKG +V VS
Sbjct: 98 P---AQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A++ +++G + + ID GV+G+KV I
Sbjct: 155 GRLGGAEIARTEWYREGRVPL--HTLRADIDYNTSEAHTTYGVIGVKVWI 202
>TIGR_CMR|CJE_1869 [details] [associations]
symbol:CJE_1869 "ribosomal protein S3" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 EMBL:CP000025 GenomeReviews:CP000025_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 HAMAP:MF_01309_B
SUPFAM:SSF54821 TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982
eggNOG:COG0092 OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:YP_179839.1
ProteinModelPortal:Q5HS96 SMR:Q5HS96 STRING:Q5HS96 GeneID:3232496
KEGG:cjr:CJE1869 PATRIC:20045570
BioCyc:CJEJ195099:GJC0-1908-MONOMER Uniprot:Q5HS96
Length = 233
Score = 122 (48.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/170 (26%), Positives = 78/170 (45%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ L R+L G S + V T + + + A R ++G+KG + L +Q
Sbjct: 38 KIRAFLKRKLYYAGISQILVERTAKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIG- 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
V + ++ G A AES+ +L +A RRA V++ ++GAKG +V VS
Sbjct: 97 --KDVNINIKEERKAGASAQLAAESVATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A++ + +G + + ID G +G+KV I
Sbjct: 155 GRLGGAEMARTEWYLEGRVPL--HTLRAKIDYGFAEARTTYGNIGVKVWI 202
>TIGR_CMR|GSU_2851 [details] [associations]
symbol:GSU_2851 "ribosomal protein S3" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0042254 "ribosome biogenesis" evidence=ISS] InterPro:IPR001351
InterPro:IPR004044 InterPro:IPR004087 InterPro:IPR005704
InterPro:IPR009019 InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650
PROSITE:PS00548 PROSITE:PS50823 SMART:SM00322 GO:GO:0006412
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:NP_953894.1
ProteinModelPortal:Q748Z4 SMR:Q748Z4 GeneID:2688714
KEGG:gsu:GSU2851 PATRIC:22028549
BioCyc:GSUL243231:GH27-2825-MONOMER Uniprot:Q748Z4
Length = 211
Score = 120 (47.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/170 (24%), Positives = 77/170 (45%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+L L + L G S +E+ + +I I R ++G+KG + L + K
Sbjct: 37 KLRNFLKKRLYNSGVSKIEIERAANKAKINIYTARPGLIIGKKGAEVETLKKELAK---L 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ + L ++V L A AE++ +L +A RRA + ++ GAKG + S
Sbjct: 94 TDKEIYLNIQEVRKPELDAQLVAENVALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCS 153
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
G+L A+ +++ +++G + + ID G++G+KV I
Sbjct: 154 GRLGGAEMSRTEWYREGRVPL--HTLRADIDYGFAEAKTTYGIIGVKVLI 201
>TIGR_CMR|NSE_0272 [details] [associations]
symbol:NSE_0272 "ribosomal protein S3" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
EMBL:CP000237 GenomeReviews:CP000237_GR Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:YP_506163.1
ProteinModelPortal:Q2GED3 STRING:Q2GED3 GeneID:3931521
KEGG:nse:NSE_0272 PATRIC:22680637
BioCyc:NSEN222891:GHFU-299-MONOMER Uniprot:Q2GED3
Length = 211
Score = 116 (45.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
K VA+ F + E A G S V ++ +I + + ++G+KG +
Sbjct: 31 KTVAEDYFVTKYVE---SSFAHIGISKVIIKRKGASCDITLHCMKPGLIIGKKGADLESF 87
Query: 70 TSVVQKRFKF-PE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+ K+F F P N VE+ +K N+ A+ A+S+ ++L + RR + +M
Sbjct: 88 RLKLNKKFGFVPSLNVVEV--KKPNSS---AVLVAKSIAFQLEKRSSFRRVIKKAIATVM 142
Query: 128 -ESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
ES KG +V SG+L A+ A++ FK+G + + ID V GV+G+K
Sbjct: 143 RESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMRAD--IDYWVAEAHTTYGVIGVK 200
Query: 186 VKI 188
V I
Sbjct: 201 VWI 203
>TIGR_CMR|SPO_0487 [details] [associations]
symbol:SPO_0487 "ribosomal protein S3" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 HAMAP:MF_01309_B
SUPFAM:SSF54821 TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982
eggNOG:COG0092 OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:YP_165749.1
ProteinModelPortal:Q5LW56 SMR:Q5LW56 PRIDE:Q5LW56 GeneID:3195573
KEGG:sil:SPO0487 PATRIC:23374235 Uniprot:Q5LW56
Length = 235
Score = 116 (45.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 47/191 (24%), Positives = 84/191 (43%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E + E + G + V + + + I R ++G+KG I L +K
Sbjct: 39 IREFIKEECKQAGVARVIIERPHKKCRVTIHTARPGVIIGKKGADIETLR---KKLANMT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
++ + L +V + A AES+ +L ++ RRA ++ M GA G V V+G
Sbjct: 96 DSELHLNIVEVRKPEMDAQLVAESIAQQLERRVSFRRAMKRAVQNSMRMGALGIRVNVAG 155
Query: 141 KLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI----MLSWDPN 195
+L A+ A++ +++G + + ID A+ G++GIKV I +L DP
Sbjct: 156 RLGGAEIARTEWYREGRVPL--HTLRADIDYALAEASTPYGIIGIKVWIFKGEILEHDPQ 213
Query: 196 GKQGPTTPLPD 206
+ L D
Sbjct: 214 ARDRKAQELQD 224
>TIGR_CMR|CPS_0867 [details] [associations]
symbol:CPS_0867 "ribosomal protein S3" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 HAMAP:MF_01309_B
SUPFAM:SSF54821 TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982
eggNOG:COG0092 OMA:MGQKTNP RefSeq:YP_267616.1
ProteinModelPortal:Q487Z9 SMR:Q487Z9 STRING:Q487Z9 PRIDE:Q487Z9
GeneID:3522695 KEGG:cps:CPS_0867 PATRIC:21465027
BioCyc:CPSY167879:GI48-953-MONOMER Uniprot:Q487Z9
Length = 231
Score = 114 (45.2 bits), Expect = 0.00011, P = 0.00011
Identities = 46/170 (27%), Positives = 76/170 (44%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L +L S V + + I R V+G+KG + +L V K
Sbjct: 38 KVREFLKEKLKRASLSKVVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRLAVSKIAGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P ++ +V + A A+S+ +L + RRA ++ M GAKG +V VS
Sbjct: 98 P---AQINIAEVRKPEMDAQLVADSIASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
G+L A A++ +++G + + ID A+ GV+GIKV I
Sbjct: 155 GRLGGADIARAEWYREGRVPL--HTLRADIDYAIARGNTTYGVIGIKVWI 202
>TIGR_CMR|ECH_0415 [details] [associations]
symbol:ECH_0415 "ribosomal protein S3" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:YP_507233.1
ProteinModelPortal:Q2GH50 SMR:Q2GH50 STRING:Q2GH50 PRIDE:Q2GH50
GeneID:3927330 KEGG:ech:ECH_0415 PATRIC:20576307
BioCyc:ECHA205920:GJNR-416-MONOMER Uniprot:Q2GH50
Length = 211
Score = 111 (44.1 bits), Expect = 0.00019, P = 0.00019
Identities = 37/134 (27%), Positives = 69/134 (51%)
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
++G+KG ++ V Q+ K N++EL +V L A+ AE++ +L ++ RR
Sbjct: 75 IIGKKGA---DIDKVKQQIVKMINNNIELNIIEVKKPELKAVLIAENIAQQLEKRISFRR 131
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVL 176
A ++ ++ GAKG +V +G+L A+ A++ +K+G + N ID
Sbjct: 132 AMKRSVQSCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRAN--IDYGFSEAK 189
Query: 177 LRQGVLGIKVKIML 190
G++G+KV + L
Sbjct: 190 TIYGIIGVKVWVYL 203
>TIGR_CMR|APH_0286 [details] [associations]
symbol:APH_0286 "ribosomal protein S3" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 GO:GO:0003735 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0019843 Gene3D:3.30.300.20
InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
RefSeq:YP_504898.1 ProteinModelPortal:Q2GL53 SMR:Q2GL53
STRING:Q2GL53 PRIDE:Q2GL53 GeneID:3931029 KEGG:aph:APH_0286
PATRIC:20949146 OMA:MGQKTNP ProtClustDB:PRK00310
BioCyc:APHA212042:GHPM-316-MONOMER Uniprot:Q2GL53
Length = 211
Score = 110 (43.8 bits), Expect = 0.00026, P = 0.00026
Identities = 39/140 (27%), Positives = 72/140 (51%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
I I + R ++G+KG ++ + QK K + VEL+ +V L A+ AE++
Sbjct: 65 INIHSARPGVIIGKKGV---DIDRIKQKIAKMVNHEVELHIVEVKKPDLKAVLIAENIAQ 121
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNE 166
+L ++ RRA ++ ++ GAKG +V +G+L A+ A++ +K+G + N
Sbjct: 122 QLEKRVSFRRAMKRGVQNCLKMGAKGVKVSCAGRLGGAEIARTEWYKEGSVPLHTFRAN- 180
Query: 167 YIDSAVRHVLLRQGVLGIKV 186
ID + G++G+KV
Sbjct: 181 -IDYSCVEAKTIYGIVGVKV 199
>TIGR_CMR|SO_0237 [details] [associations]
symbol:SO_0237 "ribosomal protein S3" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR005704 InterPro:IPR009019 InterPro:IPR018280
Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548 PROSITE:PS50823
SMART:SM00322 GO:GO:0006412 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0003735 GO:GO:0019843 Gene3D:3.30.300.20 InterPro:IPR015946
SUPFAM:SSF54814 GO:GO:0015935 Gene3D:3.30.1140.32 HAMAP:MF_01309_B
SUPFAM:SSF54821 TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982
eggNOG:COG0092 OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:NP_715877.1
ProteinModelPortal:P59183 SMR:P59183 GeneID:1168120
KEGG:son:SO_0237 PATRIC:23520167 Uniprot:P59183
Length = 230
Score = 111 (44.1 bits), Expect = 0.00026, P = 0.00026
Identities = 45/172 (26%), Positives = 81/172 (47%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L +L S + + + I R V+G+KG + L + V K
Sbjct: 38 EVRKYLADKLQAASVSKIVIERPAKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGT 97
Query: 80 PE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVI 137
P N E+ +++ + L A + A+ L +++ A++RA +R GA+G +V
Sbjct: 98 PAQINIAEIRKPELDAK-LVADSIAQQLERRVMFRRAMKRAVQNAMRI----GAQGIKVE 152
Query: 138 VSGKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
VSG+L A+ A+S +++G + + ID + + GV+GIKV I
Sbjct: 153 VSGRLGGAEIARSEWYREGRVPL--HTLRADIDYSTSESHTQYGVIGIKVWI 202
>UNIPROTKB|P73314 [details] [associations]
symbol:rpsC "30S ribosomal protein S3" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001351 InterPro:IPR004044
InterPro:IPR004087 InterPro:IPR005704 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:BA000022 GenomeReviews:BA000022_GR
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 PIR:S77496 RefSeq:NP_440663.1
RefSeq:YP_005650722.1 ProteinModelPortal:P73314 SMR:P73314
IntAct:P73314 STRING:P73314 GeneID:12256414 GeneID:953966
KEGG:syn:sll1804 KEGG:syy:SYNGTS_0769 PATRIC:23838530
Uniprot:P73314
Length = 240
Score = 109 (43.4 bits), Expect = 0.00050, P = 0.00050
Identities = 43/170 (25%), Positives = 75/170 (44%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + + + L G S + + + E+ I R V+G G I +L +QK
Sbjct: 38 KIRQYIEKTLNNAGISDIRIERKAEQIELGIHTARPGVVVGRGGSGIEQLREGLQKLLG- 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ + +V N A AE + +L ++ RR L+ + KG ++ VS
Sbjct: 97 SARQIRVNVIEVPNADADAALMAEYIGQQLERRVSFRRVVRQALQRAERAEVKGIKIQVS 156
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A++ ++G + + ID A R L G+LGIKV I
Sbjct: 157 GRLNGAEIARTEWVREGRVPL--HTLRADIDYAYRTALTTYGILGIKVWI 204
>TIGR_CMR|BA_0116 [details] [associations]
symbol:BA_0116 "ribosomal protein S3" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001351 InterPro:IPR004044 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR005704 InterPro:IPR009019
InterPro:IPR018280 Pfam:PF00189 Pfam:PF07650 PROSITE:PS00548
PROSITE:PS50823 SMART:SM00322 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
Gene3D:3.30.300.20 InterPro:IPR015946 SUPFAM:SSF54814 GO:GO:0015935
Gene3D:3.30.1140.32 HAMAP:MF_01309_B SUPFAM:SSF54821
TIGRFAMs:TIGR01009 HOGENOM:HOG000210610 KO:K02982 eggNOG:COG0092
OMA:MGQKTNP ProtClustDB:PRK00310 RefSeq:NP_842684.1
RefSeq:YP_016721.1 RefSeq:YP_026402.1 ProteinModelPortal:Q81VS4
SMR:Q81VS4 DNASU:1086384 EnsemblBacteria:EBBACT00000008778
EnsemblBacteria:EBBACT00000017008 EnsemblBacteria:EBBACT00000020633
GeneID:1086384 GeneID:2818170 GeneID:2851640 KEGG:ban:BA_0116
KEGG:bar:GBAA_0116 KEGG:bat:BAS0116
BioCyc:BANT260799:GJAJ-127-MONOMER
BioCyc:BANT261594:GJ7F-129-MONOMER Uniprot:Q81VS4
Length = 219
Score = 106 (42.4 bits), Expect = 0.00089, P = 0.00089
Identities = 41/170 (24%), Positives = 73/170 (42%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E + L + + VE+ R + I + V+G+ G + L + +
Sbjct: 37 KIREYINVRLKDSAVAKVEIERAANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQ---L 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
V + +V L A E++ +L ++ RRA V++ M +GAKG + VS
Sbjct: 94 TGKRVHINILEVKRADLNAKLVGENIARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVS 153
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
G+L A A++ + +G + + ID A G LG+KV I
Sbjct: 154 GRLGGADIARAESYSEGTVPL--HTLRADIDYAAVEADTTYGKLGVKVWI 201
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 236 236 0.00089 113 3 11 22 0.41 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 53
No. of states in DFA: 592 (63 KB)
Total size of DFA: 158 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.57u 0.11s 19.68t Elapsed: 00:00:02
Total cpu time: 19.58u 0.11s 19.69t Elapsed: 00:00:02
Start: Mon May 20 16:54:40 2013 End: Mon May 20 16:54:42 2013