BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026588
(236 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444782|ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 218/232 (93%), Positives = 226/232 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
VLGIKVKIML WDP GKQGP TPLPDLVTIH+PK+EEEY++P +ATDIEVP
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEKLATDIEVP 232
>gi|225442156|ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/231 (93%), Positives = 224/231 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN+VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
VLGIKVKIML WDP GKQGP TPLPDLVTIH+PK+EEEY++P + A DIEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYLRPPIPAADIEV 231
>gi|356534894|ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/235 (92%), Positives = 225/235 (95%), Gaps = 2/235 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT--LVATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPDLVTIHSPK+EEEY++P L A DIEVP+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIQPAPVLAANDIEVPV 235
>gi|359476269|ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 217/232 (93%), Positives = 225/232 (96%), Gaps = 1/232 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGKRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
VLGIKVKIML WDP GKQGPTTPLPDLVTIH+PK+EEEYV P L T+IEVP
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYVPPVL-TTNIEVP 231
>gi|356559953|ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/234 (92%), Positives = 225/234 (96%), Gaps = 1/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA+Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV-ATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPDLVTIH+PK+EEEY +P V ATDIEVP+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATDIEVPV 234
>gi|358348478|ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 215/236 (91%), Positives = 227/236 (96%), Gaps = 1/236 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP-TLVATDIEVPIQV 235
VLGIKVKIML WDP GKQGP TPLPD+VTIH+PK+EEEY++P +VA DIEVP+ +
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPI 236
>gi|356559951|ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/234 (92%), Positives = 225/234 (96%), Gaps = 1/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV-ATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPDLVTIH+PK+EEEY +P V AT+IEVP+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPV 234
>gi|351726176|ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycine max]
gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust.
Identities = 216/235 (91%), Positives = 225/235 (95%), Gaps = 2/235 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC+
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACH 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT--LVATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPDLVTIHSPK+EEEY++P L A DIEVP+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIQPAPVLAANDIEVPV 235
>gi|356534900|ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 239
Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust.
Identities = 218/239 (91%), Positives = 226/239 (94%), Gaps = 3/239 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV---ATDIEVPIQVA 236
VLGIKVKIML WDP GKQGP TPLPDLVTIHSPK+EEEY++P V DIEVP+ VA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHSPKEEEEYIRPAPVLAANNDIEVPVPVA 239
>gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa]
gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa]
gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/236 (90%), Positives = 225/236 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA 236
VLGIKVKIML WDP GK GP TPLPDLVTIH PK+EEEYV P ++ T+IE+P+ +A
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVAPPVMTTNIEIPVALA 236
>gi|357438107|ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/236 (90%), Positives = 227/236 (96%), Gaps = 1/236 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK+LGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKVLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP-TLVATDIEVPIQV 235
VLGIKVKIML WDP GKQGP TPLPD+VTIH+PK+EEEY++P +VA DIEVP+ +
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPI 236
>gi|388494596|gb|AFK35364.1| unknown [Lotus japonicus]
gi|388504726|gb|AFK40429.1| unknown [Lotus japonicus]
Length = 237
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/237 (90%), Positives = 227/237 (95%), Gaps = 1/237 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPM+TEIIIRATRTQ VLG
Sbjct: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV-ATDIEVPIQVA 236
VLGIKVKIML WDP GKQGP TPLPD+VTIH+PK+E+EY++P V A ++EVP+ VA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEDEYIRPAAVSAEEVEVPVAVA 237
>gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula]
gi|388507820|gb|AFK41976.1| unknown [Medicago truncatula]
Length = 239
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/236 (90%), Positives = 226/236 (95%), Gaps = 1/236 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR CY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP-TLVATDIEVPIQV 235
VLGIKVKIML WDP GKQGP TPLPD+VTIH+PK+EEEY++P +VA DIEVP+ +
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIEVPVPI 236
>gi|449447888|ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449521735|ref|XP_004167885.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 236
Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust.
Identities = 215/233 (92%), Positives = 224/233 (96%), Gaps = 2/233 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV--ATDIEV 231
VLGIKVKIML WDP GKQGP TPLPDLVTIHSPK+EE++++P V T+IEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIEV 233
>gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 234
Score = 441 bits (1135), Expect = e-122, Method: Compositional matrix adjust.
Identities = 212/233 (90%), Positives = 222/233 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MSTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP+NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
VLGIKVKIML WDP GK GP TPLPDLVTIHSPK+EEEY P ++ +IE+P+
Sbjct: 181 VLGIKVKIMLDWDPRGKLGPMTPLPDLVTIHSPKEEEEYNTPAVLTANIEIPV 233
>gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa]
gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa]
gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/233 (90%), Positives = 222/233 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
VLGIKVKIML WDP GK GP TPLPDLVTIH PK++EEYV P ++ +IE+P+
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEDEEYVAPPVMTANIEIPV 233
>gi|357439691|ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula]
gi|355479171|gb|AES60374.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|388518095|gb|AFK47109.1| unknown [Medicago truncatula]
Length = 239
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 213/231 (92%), Positives = 223/231 (96%), Gaps = 1/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP-TLVATDIE 230
VLGIKVKIML WDP GKQGP TPLPD+VTIH+PK+EEEY++P +VA DIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEEYIRPAAVVANDIE 231
>gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 215/233 (92%), Positives = 223/233 (95%), Gaps = 1/233 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
VLGIKVKIML WDP GK GP TPLPDLVTIH PK+EEEYV P L+ T+IE+P+
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYV-PPLLTTNIEIPV 232
>gi|388495648|gb|AFK35890.1| unknown [Lotus japonicus]
Length = 235
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/234 (90%), Positives = 225/234 (96%), Gaps = 1/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP++TEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVV KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVSKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV-ATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPD+VTIHSPK+E+EY++P V A+DIEVP+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHSPKEEDEYIQPAAVSASDIEVPV 234
>gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
Length = 235
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 212/234 (90%), Positives = 224/234 (95%), Gaps = 1/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+S GQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISCGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL-VATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPDL +IH+PKDEEEY++P L +A ++EVP+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPATPLPDLASIHTPKDEEEYMRPPLTMAPELEVPV 234
>gi|255637340|gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/234 (91%), Positives = 223/234 (95%), Gaps = 1/234 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+ SGQPV +YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMIFSGQPVKDYIDFAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV-ATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPDLVTIH+PK+EEEY +P V AT+IEVP+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYARPAAVLATNIEVPV 234
>gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 233
Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/234 (92%), Positives = 227/234 (97%), Gaps = 3/234 (1%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL
Sbjct: 1 MATAQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRFKFPENSVELYAEKVN+RGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQ
Sbjct: 121 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
GVLGIKVKIML WDP GKQGPTTPLPDLVTIHSPK+EE ++P ++AT++EVP+
Sbjct: 181 GVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHSPKEEE--LRPPVLATEVEVPV 232
>gi|358248410|ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/232 (92%), Positives = 223/232 (96%), Gaps = 1/232 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK-PTLVATDIEV 231
VLGIKVKIML WDP GKQGP TPLPDLVTIH+PK+EEEY + P ++A DIEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEV 232
>gi|449446618|ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 243
Score = 439 bits (1128), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/232 (92%), Positives = 222/232 (95%), Gaps = 2/232 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK--PTLVATDIE 230
VLGIKVKIML WDP GKQGPTTPLPD+VTIHSPK+EEE V P ++ DIE
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPAVLTADIE 232
>gi|357498229|ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|357498233|ref|XP_003619405.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494418|gb|AES75621.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494420|gb|AES75623.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 235
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/235 (89%), Positives = 220/235 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGY+GVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYAGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFK YM+SSGQPV +Y+DSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKQNYMISSGQPVKDYVDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
VLGIKVKIML WDP GKQGP TPLPD+VTIH+PKDEEEY +P V + VPI V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKDEEEYTRPAAVVAPLPVPIAV 235
>gi|255638159|gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/232 (91%), Positives = 222/232 (95%), Gaps = 1/232 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR CY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK-PTLVATDIEV 231
VLGIKVKIML WDP GKQGP TPLPDLVTIH+PK+EEEY + P ++A DIEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYNRPPAVLANDIEV 232
>gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/233 (91%), Positives = 221/233 (94%), Gaps = 2/233 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
VLGIKVKIML WDP GK GP TPLPDLVTIH PK EEEYV P + T+IE+P+
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPK-EEEYVPPVM-TTNIEIPV 231
>gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis]
gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis]
Length = 233
Score = 433 bits (1113), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/225 (93%), Positives = 217/225 (96%), Gaps = 1/225 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEY-VKPTL 224
VLGIKVKIML WDP GKQGPTTPLPDLVTIH+PK+EEE+ KP L
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEFAAKPQL 225
>gi|255637525|gb|ACU19089.1| unknown [Glycine max]
Length = 239
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 211/239 (88%), Positives = 219/239 (91%), Gaps = 3/239 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAK MKFKDGYM+ GQPV +YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKFMKFKDGYMIFFGQPVKDYIDFAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV---ATDIEVPIQVA 236
V GIKVKIML WDP GKQGP TPLPD VTIH PK+EEEY++P V DIEVP+ VA
Sbjct: 181 VFGIKVKIMLDWDPKGKQGPKTPLPDFVTIHFPKEEEEYIRPAPVLGANNDIEVPVPVA 239
>gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza
sativa]
gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group]
gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group]
gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust.
Identities = 208/231 (90%), Positives = 216/231 (93%), Gaps = 4/231 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
TQISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK
Sbjct: 5 TQISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV
Sbjct: 65 GRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PVN YIDSAVRHVLLRQGVL
Sbjct: 125 LRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVL 184
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
GIKVKIML WDP GKQGP TPLPDLVTIH+PKDE+E+ KP E+P+
Sbjct: 185 GIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTA----EIPV 231
>gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/226 (91%), Positives = 216/226 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 226
VLGIKVKIML WDP GK GPTTPLPDLVTIH+PK+EEE P L+A
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEEEELRPPVLIA 226
>gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis]
gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis]
Length = 233
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/231 (89%), Positives = 216/231 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MAKQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
VLGIKVKIML WDP GKQGPT PLPD VTI++PKDEE++ V ++E+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTKPLPDFVTIYTPKDEEDFSSKPSVGNEVEI 231
>gi|357144865|ref|XP_003573440.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 227
Score = 425 bits (1092), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/225 (91%), Positives = 215/225 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV 225
VLGIKVKIML WDP GK GPTTPLPDLVTIH PK+E+E PTLV
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPPTLV 225
>gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/231 (88%), Positives = 216/231 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG PVN+YIDSAVRHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
VLGIKVKIML WDP GKQGP TPLPD+VTIH PK+EEE+ V + E+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDVVTIHMPKEEEEFAHKPHVGKEAEM 231
>gi|413921201|gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 423 bits (1088), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/226 (90%), Positives = 214/226 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 226
VLGIKVKIML WDP GK GP TPLPDLVTIH+PK+E+E P L A
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKEEDELRPPVLAA 226
>gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust.
Identities = 205/224 (91%), Positives = 213/224 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIML WDP GK GP TPLPDLVTIH+PKDE+E P L
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDEDELRPPVL 224
>gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/225 (90%), Positives = 214/225 (95%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV 225
VLGIKVKIML WDP GK GPTTPLPDLVTIH PK+E+E P L+
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEEDELRPPALI 225
>gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust.
Identities = 202/219 (92%), Positives = 212/219 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSG PVN+YIDSAVRHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAARAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEY 219
VLGIKVKIML WDP GKQGP TPLPD+VTIH PK+EEE+
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPMTPLPDVVTIHMPKEEEEF 219
>gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays]
gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays]
gi|223947389|gb|ACN27778.1| unknown [Zea mays]
gi|223972753|gb|ACN30564.1| unknown [Zea mays]
gi|413917290|gb|AFW57222.1| 40S ribosomal protein S3 [Zea mays]
Length = 229
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/229 (89%), Positives = 215/229 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR++MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRYVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDI 229
VLGIKVKIML WDP GK GP TPLPDLVTIH+PKDE+E P L ++
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPPVLAPPEV 229
>gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 421 bits (1083), Expect = e-116, Method: Compositional matrix adjust.
Identities = 204/226 (90%), Positives = 214/226 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGA+GCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAEGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 226
VLGIKVKIML WDP GK GP TPLPDLVTIH+PK+E+E P L A
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPITPLPDLVTIHTPKEEDELRPPVLAA 226
>gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum]
Length = 238
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 207/221 (93%), Positives = 212/221 (95%), Gaps = 1/221 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPV EYID+AVRHVLLRQ
Sbjct: 121 YGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
GVLGIKVKIML WDP GKQGP TPLPDLVTIH PK+E E+V
Sbjct: 181 GVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEEGEFV 221
>gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
gi|75170994|sp|Q9FJA6.1|RS33_ARATH RecName: Full=40S ribosomal protein S3-3
gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana]
gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
Length = 248
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/227 (88%), Positives = 214/227 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
VLG+KVKIML WDP GKQGP TPLPD+V IH+PK+++ Y+ P V T
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVT 227
>gi|212723988|ref|NP_001132637.1| hypothetical protein [Zea mays]
gi|194694962|gb|ACF81565.1| unknown [Zea mays]
gi|414887551|tpg|DAA63565.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
gi|414887552|tpg|DAA63566.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 232
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/227 (89%), Positives = 215/227 (94%), Gaps = 2/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PVN YIDSAVRHVLLRQGVLGI
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
KVKIML WDP GKQGPT PLPDLVTIH PK+E+E+++P +A +I+V
Sbjct: 187 KVKIMLDWDPKGKQGPTMPLPDLVTIHVPKEEDEFLRP--LAAEIQV 231
>gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
Length = 232
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/227 (89%), Positives = 214/227 (94%), Gaps = 2/227 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PVN YIDSAVRHVLLRQGVLGI
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
KVKIML WDP GKQGPT PLPDLVTIH PK+E+E+++P +A +I V
Sbjct: 187 KVKIMLDWDPKGKQGPTMPLPDLVTIHEPKEEDEFLRP--LAAEIPV 231
>gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
Length = 230
Score = 419 bits (1076), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/230 (88%), Positives = 217/230 (94%), Gaps = 1/230 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PVNE+ID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTLVATDI 229
VLGIKVKIML WDP GK GP+TPLPD+VTI PK+EEEYV +P + D+
Sbjct: 181 VLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEEEEYVPRPYVGKEDV 230
>gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 204/225 (90%), Positives = 212/225 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F EN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFLENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV 225
VLGIKVKIML WDP GK GPTTPLPDLVTIH PK+E E P LV
Sbjct: 181 VLGIKVKIMLDWDPKGKLGPTTPLPDLVTIHPPKEENELRPPALV 225
>gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1
gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain
[Arabidopsis thaliana]
gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana]
gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
Length = 250
Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/229 (88%), Positives = 211/229 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDI 229
VLGIKVKIML WDP GK GP TPLPD+V IH+PKD+ Y P A +
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPV 229
>gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
Length = 248
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/227 (88%), Positives = 213/227 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIGELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
VLG+KVKIML WDP GKQGP TPLPD+V IH+PK+++ Y+ P V T
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDDVYIAPAQVVT 227
>gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/219 (91%), Positives = 208/219 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEY 219
VLGIKVK+ML WDP GK GP TPLPD+V IHSPK+EE Y
Sbjct: 181 VLGIKVKVMLDWDPKGKLGPMTPLPDVVIIHSPKEEETY 219
>gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 201/229 (87%), Positives = 211/229 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKF DGYMVSSGQP EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFMDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDI 229
VLGIKVKIML WDP GK GP TPLPD+V IH+PKD+ + P +A +
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVNLAPAQIAAPV 229
>gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 201/233 (86%), Positives = 216/233 (92%), Gaps = 1/233 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF+FP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT-LVATDIEVP 232
VLG+KVKIML WDP GK GP TPLPD+V IH+PK+++ Y+ P +VA VP
Sbjct: 181 VLGLKVKIMLDWDPKGKLGPMTPLPDVVIIHTPKEDDVYIAPAQVVAPTALVP 233
>gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
Length = 236
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/236 (86%), Positives = 217/236 (91%), Gaps = 7/236 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR---- 116
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVLY 120
Query: 117 --RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRH 174
RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PVNE+ID AVRH
Sbjct: 121 FVRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGSPVNEFIDRAVRH 180
Query: 175 VLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTLVATDI 229
VLLRQGVLGIKVKIML WDP GK GP+TPLPD+VTI PK+EEEYV +P + D+
Sbjct: 181 VLLRQGVLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEEEEYVPRPYVGKEDV 236
>gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
gi|75183568|sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2
gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana]
gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana]
gi|332645631|gb|AEE79152.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
Length = 249
Score = 412 bits (1058), Expect = e-113, Method: Compositional matrix adjust.
Identities = 199/217 (91%), Positives = 206/217 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP EYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VLGIKVK+ML WDP G GP TPLPD+V IHSPK+EE
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEE 217
>gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/231 (85%), Positives = 213/231 (92%), Gaps = 2/231 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MALQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAK MKFKDGYM+SSG PVN+YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKPMKFKDGYMISSGHPVNQYIDGAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
VLGIKVKIML WDP GKQGP TPLPDLVTIH PKD++E+++P +A +I V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDDDEFLRP--LAAEIAV 229
>gi|357116410|ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 276
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/220 (87%), Positives = 206/220 (93%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTPMRTEIIIRATRTQ+VLGEK
Sbjct: 49 AQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQSVLGEK 108
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRRACYGV
Sbjct: 109 GRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGV 168
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PVN YID AVRHVLLRQGVL
Sbjct: 169 LRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDGAVRHVLLRQGVL 228
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GIKVKIML WDP GKQGP TPLPDLVTIH PKDE+E+++P
Sbjct: 229 GIKVKIMLDWDPKGKQGPATPLPDLVTIHPPKDEDEFLRP 268
>gi|413921202|gb|AFW61134.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 265
Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/263 (77%), Positives = 214/263 (81%), Gaps = 37/263 (14%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLR-- 178
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLR
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQV 180
Query: 179 -----------------------------------QGVLGIKVKIMLSWDPNGKQGPTTP 203
QGVLGIKVKIML WDP GK GP TP
Sbjct: 181 CFATIARCNVCLSLGKHFIFDVPNVISQQTSFSVVQGVLGIKVKIMLDWDPKGKVGPITP 240
Query: 204 LPDLVTIHSPKDEEEYVKPTLVA 226
LPDLVTIH+PK+E+E P L A
Sbjct: 241 LPDLVTIHTPKEEDELRPPVLAA 263
>gi|358346770|ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355503373|gb|AES84576.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 237
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 193/235 (82%), Positives = 213/235 (90%), Gaps = 2/235 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRK VADGV AE++E L+R LAEDGYSGVE+RVTP+RTEIII+ATRTQ VLG
Sbjct: 1 MATQMSKKRKVVADGVLNAEMHEFLSRVLAEDGYSGVEIRVTPIRTEIIIKATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+++ KRF FPENSV+LYAEKV+NRGLCA AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTTLIHKRFNFPENSVQLYAEKVSNRGLCAAAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFK G M+SSGQPV +YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKHGDMLSSGQPVKDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT--LVATDIEVPI 233
VLGIKVKIML WDP GKQGP TPLPD+VTIH+PK+EE Y +P L T+IEVPI
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEEEVYNRPATILPTTNIEVPI 235
>gi|384247377|gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Coccomyxa
subellipsoidea C-169]
Length = 217
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/217 (87%), Positives = 204/217 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+ TRELAE GYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATAISKKRKFVADGVFYAELNELFTRELAEHGYSGVEVRVTPLRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELT+VVQKRFKFPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 VKGRRIRELTAVVQKRFKFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIME+GAKGCEVIVSGKLRAQRAK+MKFKDGYM+SSGQPVN+YIDSAVRHVLLRQG
Sbjct: 121 GVLRFIMENGAKGCEVIVSGKLRAQRAKAMKFKDGYMISSGQPVNDYIDSAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VLGIKV+IM + DP GK GP +PD+V +H+PKDE+
Sbjct: 181 VLGIKVRIMKNHDPTGKSGPKATMPDVVVVHAPKDED 217
>gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum]
Length = 240
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/223 (88%), Positives = 206/223 (92%), Gaps = 3/223 (1%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIR LTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 61 GEKGRRIRSLTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 YGVLRFIMESGA-KGCEV-IVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLL 177
YGVLRF+MESG GCEV VSGKLRAQRAKSMK DGYM+SSG PV++Y+D+AVRHVLL
Sbjct: 121 YGVLRFVMESGTPTGCEVDSVSGKLRAQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLL 180
Query: 178 RQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
RQGVLGIKVKIML WDP GKQGP TPLPDLVTIH PK+E E+V
Sbjct: 181 RQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEEGEFV 223
>gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta]
Length = 230
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 192/219 (87%), Positives = 202/219 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSG P YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGHPARVYIDGAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEY 219
VLGIKVKIM WDP GK+GP TPLPD+V + PK+EE Y
Sbjct: 181 VLGIKVKIMKEWDPTGKRGPRTPLPDVVKVLEPKEEEVY 219
>gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 187/218 (85%), Positives = 203/218 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF+AELNE+L RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MSAQISKKRKFVADGVFYAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIME+GAKGCEV+VSGKLR QR K+MKFKDGYM+SSG PV EYI+S+VRHVLLRQG
Sbjct: 121 GVLRFIMENGAKGCEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESSVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
+GIKVKIML WDP G+ GP TP+PD+VTIH+PKDE+E
Sbjct: 181 CVGIKVKIMLDWDPKGRTGPKTPVPDVVTIHNPKDEDE 218
>gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 230
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/219 (87%), Positives = 201/219 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVQDGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSG P YID AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDGAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEY 219
VLGIKVKIM WDP GK+GP TPLPD+V + PK+EE Y
Sbjct: 181 VLGIKVKIMKEWDPTGKRGPRTPLPDVVKVLEPKEEEVY 219
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/230 (83%), Positives = 207/230 (90%), Gaps = 1/230 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1367 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 1426
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV +RGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 1427 EKGRRIRELTSVVQKRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACY 1486
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRA RAKSMKFKDGYMVSSG P YID+AVRHVLLRQG
Sbjct: 1487 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQG 1546
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTLVATDI 229
VLGIKVKIM WDP GK+GP TPLPD+V + PK+EE + KP + D+
Sbjct: 1547 VLGIKVKIMKDWDPTGKRGPRTPLPDVVKVLEPKEEEIFQEKPHIGKEDM 1596
>gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis]
Length = 230
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 188/220 (85%), Positives = 202/220 (91%), Gaps = 1/220 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA+ +SK RK VADGVF+AELNE+L REL +GYSGVEVRVTPMRTE+IIRATRTQNVLG
Sbjct: 1 MASAVSKTRKAVADGVFYAELNELLMRELGGEGYSGVEVRVTPMRTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELTSVVQKRFKFPE SVELYAEKV NRGLCA+AQAES+RYKLLGGLAVRRACY
Sbjct: 61 VKGRRIRELTSVVQKRFKFPEGSVELYAEKVANRGLCAVAQAESMRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSG PV+EYIDSA RHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGNPVHEYIDSATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VLGIKV+IM WDP GK GP TPLPD+VT+ +PK EEEYV
Sbjct: 181 VLGIKVRIMKEWDPTGKVGPRTPLPDVVTVLAPK-EEEYV 219
>gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/203 (92%), Positives = 193/203 (95%)
Query: 24 VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF FPEN
Sbjct: 1 MLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENG 60
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLR
Sbjct: 61 VELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLR 120
Query: 144 AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTP 203
AQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML WDP GK GPTTP
Sbjct: 121 AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTTP 180
Query: 204 LPDLVTIHSPKDEEEYVKPTLVA 226
LPDLVTIH+PK+EEE P L+A
Sbjct: 181 LPDLVTIHAPKEEEELRPPVLIA 203
>gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/227 (81%), Positives = 201/227 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF+AELNE L RELAE+GY+GVEVRVTP RTEI+IRATRTQNVLG
Sbjct: 1 MTTIISKKRKFVADGVFYAELNEFLQRELAEEGYAGVEVRVTPARTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRF +PEN+VELYAEKVNNRGL A+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSIVQKRFNYPENTVELYAEKVNNRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKGCEV++SGKLRA RAKSMKF DG+M+ SGQP EYID AVRHVLLRQG
Sbjct: 121 GVVRFVMESGAKGCEVVISGKLRAARAKSMKFVDGFMIHSGQPAKEYIDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
VLGIKVKIM WDP+GK GP PLPDLVTI PKD+E P V+T
Sbjct: 181 VLGIKVKIMQEWDPSGKTGPKKPLPDLVTILEPKDDEPTPVPVSVST 227
>gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299]
gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299]
Length = 233
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/230 (81%), Positives = 203/230 (88%), Gaps = 3/230 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG
Sbjct: 5 NISKKRKFVADGVFFAELNELLIRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGVL
Sbjct: 65 RRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVL 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIME+GAKG EV+VSGKLR QR K+MKFKDGYM+SSG PV EYI+SA HVLLRQG +G
Sbjct: 125 RFIMENGAKGAEVVVSGKLRGQRGKAMKFKDGYMISSGNPVREYIESACLHVLLRQGCVG 184
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE--YVKPTLVATDIEV 231
+KVKIML WDP G+ GP TP+PD VTIH+PKDE+E KP V ++E+
Sbjct: 185 VKVKIMLDWDPKGRTGPKTPIPDTVTIHNPKDEDESGLAKP-FVGKELEM 233
>gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus]
Length = 243
Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 195/216 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE+LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEILTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis]
gi|133940|sp|P02350.2|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A
gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis]
gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis]
Length = 246
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis]
gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis]
gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis]
Length = 246
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/217 (85%), Positives = 195/217 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VLGIKVKIML WDP+GK GP PLPD V+I PKDE+
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQ 217
>gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar]
Length = 250
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/217 (85%), Positives = 195/217 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 6 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 65
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 66 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 125
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 126 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 185
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VLGIKVKIML WDP+GK GP PLPD V+I PKDE+
Sbjct: 186 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQ 222
>gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus]
Length = 277
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|417409029|gb|JAA51041.1| Putative 40s ribosomal protein s3, partial [Desmodus rotundus]
Length = 251
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 9 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 68
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 69 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 128
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 129 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 188
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 189 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 224
>gi|392881646|gb|AFM89655.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|2500399|sp|P79891.1|RS3_AMBME RecName: Full=40S ribosomal protein S3
gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum]
Length = 253
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 195/216 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML+WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLAWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus]
Length = 251
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|126327841|ref|XP_001362617.1| PREDICTED: 40S ribosomal protein S3-like [Monodelphis domestica]
Length = 243
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|392873892|gb|AFM85778.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis]
Length = 241
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 188/234 (80%), Positives = 202/234 (86%), Gaps = 4/234 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT +SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATSVSKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQ 234
VLGIKVKIML WDPNGK GP PLPD V++ PKDE P + ++DI PI+
Sbjct: 181 VLGIKVKIMLPWDPNGKTGPKRPLPDNVSVVEPKDEP---LPLVPSSDIR-PIK 230
>gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus]
Length = 243
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVGPKDE 216
>gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus]
gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus]
gi|57102362|ref|XP_534008.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Canis lupus
familiaris]
gi|149719291|ref|XP_001494894.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca]
gi|344296780|ref|XP_003420081.1| PREDICTED: 40S ribosomal protein S3-like [Loxodonta africana]
gi|348555219|ref|XP_003463421.1| PREDICTED: 40S ribosomal protein S3-like [Cavia porcellus]
gi|410972647|ref|XP_003992770.1| PREDICTED: 40S ribosomal protein S3 [Felis catus]
gi|51703302|sp|P62909.1|RS3_RAT RecName: Full=40S ribosomal protein S3
gi|51703309|sp|P62908.1|RS3_MOUSE RecName: Full=40S ribosomal protein S3
gi|325530283|sp|E2RH47.1|RS3_CANFA RecName: Full=40S ribosomal protein S3
gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus]
gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus]
gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus]
gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus]
gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus]
gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus]
gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus]
gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus]
gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus]
gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus]
gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus]
gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus]
gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus]
gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus]
gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus]
gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus]
gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus]
gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus]
gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus]
gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus]
gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus]
gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|431838442|gb|ELK00374.1| 40S ribosomal protein S3 [Pteropus alecto]
gi|444731541|gb|ELW71894.1| 40S ribosomal protein S3 [Tupaia chinensis]
Length = 243
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|392873570|gb|AFM85617.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392873790|gb|AFM85727.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874028|gb|AFM85846.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874738|gb|AFM86201.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874910|gb|AFM86287.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392875972|gb|AFM86818.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876244|gb|AFM86954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876330|gb|AFM86997.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876834|gb|AFM87249.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392879612|gb|AFM88638.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881068|gb|AFM89366.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881436|gb|AFM89550.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882158|gb|AFM89911.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882756|gb|AFM90210.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392884244|gb|AFM90954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|392876674|gb|AFM87169.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct]
Length = 244
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|351696964|gb|EHA99882.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 243
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus]
gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa]
gi|293331917|ref|NP_001168943.1| uncharacterized protein LOC100382757 [Zea mays]
gi|354622982|ref|NP_001238928.1| 40S ribosomal protein S3 [Pan troglodytes]
gi|378548190|ref|NP_001243731.1| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|388453034|ref|NP_001253219.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|395814830|ref|XP_003780943.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Otolemur garnettii]
gi|395814832|ref|XP_003780944.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Otolemur garnettii]
gi|395814834|ref|XP_003780945.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Otolemur garnettii]
gi|395814836|ref|XP_003780946.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Otolemur garnettii]
gi|397487317|ref|XP_003814749.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Pan paniscus]
gi|397487319|ref|XP_003814750.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Pan paniscus]
gi|402894681|ref|XP_003910477.1| PREDICTED: 40S ribosomal protein S3 [Papio anubis]
gi|403262289|ref|XP_003923526.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403262291|ref|XP_003923527.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403262293|ref|XP_003923528.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Saimiri boliviensis
boliviensis]
gi|426245151|ref|XP_004016377.1| PREDICTED: 40S ribosomal protein S3 [Ovis aries]
gi|417719|sp|P23396.2|RS3_HUMAN RecName: Full=40S ribosomal protein S3
gi|91207641|sp|Q3T169.1|RS3_BOVIN RecName: Full=40S ribosomal protein S3
gi|115502828|sp|Q0Z8U2.1|RS3_PIG RecName: Full=40S ribosomal protein S3
gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens]
gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens]
gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens]
gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens]
gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens]
gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens]
gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens]
gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens]
gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens]
gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus]
gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa]
gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens]
gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct]
gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct]
gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens]
gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct]
gi|223973891|gb|ACN31133.1| unknown [Zea mays]
gi|296479794|tpg|DAA21909.1| TPA: 40S ribosomal protein S3 [Bos taurus]
gi|387542628|gb|AFJ71941.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|440899677|gb|ELR50946.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 243
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|392875182|gb|AFM86423.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876076|gb|AFM86870.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876116|gb|AFM86890.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877034|gb|AFM87349.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877852|gb|AFM87758.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878058|gb|AFM87861.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878198|gb|AFM87931.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878664|gb|AFM88164.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880050|gb|AFM88857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880832|gb|AFM89248.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881218|gb|AFM89441.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881252|gb|AFM89458.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881368|gb|AFM89516.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392883684|gb|AFM90674.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/216 (86%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar]
gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar]
gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG++GCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSRGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|392873640|gb|AFM85652.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKV+IML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVRIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|348522975|ref|XP_003448999.1| PREDICTED: 40S ribosomal protein S3-like [Oreochromis niloticus]
Length = 245
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis]
Length = 245
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 195/216 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGTVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
Length = 246
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
Length = 226
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 192/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFGFAEGTVELYAEKVAQRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P N Y+DSAVRHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPANSYVDSAVRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKDE 216
>gi|392873496|gb|AFM85580.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSM+F DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMEFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|392881092|gb|AFM89378.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRE T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIREFTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens]
Length = 243
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISK+RKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus]
Length = 243
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQ+RF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQERFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis]
gi|1350988|sp|P47835.1|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B
gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis]
gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis]
Length = 246
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1 MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis]
Length = 243
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|392880950|gb|AFM89307.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII A RTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILAARTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar]
gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|350537143|ref|NP_001232278.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|449284051|gb|EMC90633.1| 40S ribosomal protein S3 [Columba livia]
Length = 243
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|387018380|gb|AFJ51308.1| 40S ribosomal protein S3-like [Crotalus adamanteus]
Length = 243
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii]
gi|75061590|sp|Q5R465.1|RS3_PONAB RecName: Full=40S ribosomal protein S3
gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii]
gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
Length = 243
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|392873614|gb|AFM85639.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PV+ Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVSYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|392877878|gb|AFM87771.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/215 (86%), Positives = 193/215 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
VLGIKVKIML WDP+GK GP PLPD V+I PKD
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKD 215
>gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 192/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAE LRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 195/222 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDP+GK GP PLPD V+I PK+E P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTTP 222
>gi|392880630|gb|AFM89147.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRK VADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKLVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron camtschaticum]
Length = 240
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+A+RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WD GK GP PLPD V+I P+DE
Sbjct: 181 VLGIKVKIMLPWDTTGKMGPKKPLPDNVSIVEPRDE 216
>gi|432889332|ref|XP_004075224.1| PREDICTED: 40S ribosomal protein S3-like [Oryzias latipes]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 195/222 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDP+GK GP PLPD V+I PK+E P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTAP 222
>gi|13097759|gb|AAH03577.1| Unknown (protein for IMAGE:3544292), partial [Homo sapiens]
gi|15341992|gb|AAH13196.1| Unknown (protein for IMAGE:4347401), partial [Homo sapiens]
Length = 242
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/215 (86%), Positives = 192/215 (89%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 1 AVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGV
Sbjct: 121 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 180
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
LGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 LGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 215
>gi|392877392|gb|AFM87528.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFI ESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFITESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Callithrix
jacchus]
gi|390470016|ref|XP_003734218.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Callithrix
jacchus]
gi|390470018|ref|XP_003734219.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Callithrix
jacchus]
gi|390470020|ref|XP_003734220.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Callithrix
jacchus]
Length = 243
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 192/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMES AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESSAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPECNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio]
Length = 245
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|392875076|gb|AFM86370.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SV LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVGLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|410909578|ref|XP_003968267.1| PREDICTED: 40S ribosomal protein S3-like [Takifugu rubripes]
Length = 245
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKEE 216
>gi|392881056|gb|AFM89360.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK F FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKGFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|402913757|ref|XP_003919330.1| PREDICTED: 40S ribosomal protein S3-like [Papio anubis]
Length = 243
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 192/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEV VTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVLVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix]
Length = 245
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 194/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|392878050|gb|AFM87857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHV LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVSLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius]
Length = 247
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/217 (84%), Positives = 194/217 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG CAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGPCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VLGIKVKIML WDP+GK GP PLPD V+I PKDE+
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDEQ 217
>gi|392873428|gb|AFM85546.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF PE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGSPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus]
Length = 243
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F ELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKVELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGC+V+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/222 (83%), Positives = 195/222 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDP+GK GP PLPD V+I PK+E P
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEESLPTTP 222
>gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/231 (79%), Positives = 199/231 (86%), Gaps = 3/231 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
VLGIKVKIML WDPNGK GP PLPD V++ PK+E + P +D+++
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKRPLPDNVSVVEPKEE---IIPPFPQSDVKM 228
>gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis]
gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/223 (82%), Positives = 194/223 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFGFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MV +G+P Y+D+AVRHV LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIML WDP GK GP PLPD V+I PKDE +PT
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDQVSIVEPKDEVVPAQPT 223
>gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio]
gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio]
gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio]
Length = 245
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/216 (84%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 192/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK G PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGLKKPLPDHVSIVEPKDE 216
>gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/222 (79%), Positives = 197/222 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+AT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TPMRTEIIIRATRT NVLG
Sbjct: 2 VATAISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRQTPMRTEIIIRATRTANVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQ+RF+ E SVELYAE+VNNRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 62 EKGRRIRELTTLVQRRFQMAEGSVELYAERVNNRGLCAIAQCESLRYKLLGGLAVRRACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME+GAKG EV+VSGKLR QRAK+MKFKDGYM+SSG PV EYI S RH LLRQG
Sbjct: 122 GVLRYIMEAGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSCTRHALLRQG 181
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
+G++VKIML DP G+ GP+TP+PD V IH+PKD+E+ KP
Sbjct: 182 TIGMRVKIMLDHDPKGRNGPSTPIPDTVVIHTPKDDEDMAKP 223
>gi|392875060|gb|AFM86362.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRARY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus]
gi|22001962|sp|Q90YS2.1|RS3_ICTPU RecName: Full=40S ribosomal protein S3
gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/216 (84%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FP SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
>gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus]
gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus]
Length = 244
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/216 (85%), Positives = 193/216 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WD +GK GP PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDTSGKIGPKKPLPDHVSIVEPKEE 216
>gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864]
Length = 252
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/214 (85%), Positives = 193/214 (90%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T +SKKRKFV DGVF AELNE LTRELAE+GYSGVEVRVTP RTEIIIRATRTQNVLGEK
Sbjct: 4 TPMSKKRKFVTDGVFRAELNEFLTRELAEEGYSGVEVRVTPTRTEIIIRATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFGFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKG EV+VSGKLR QRAK+MKF+DG+MV SG P YID AVRHVLLRQGVL
Sbjct: 124 LRFIMESGAKGVEVVVSGKLRGQRAKAMKFQDGFMVHSGFPTTYYIDRAVRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
G+KVKIML+ DP G+ GP TPLPD+VTI PKDE
Sbjct: 184 GLKVKIMLAQDPTGRAGPKTPLPDIVTILEPKDE 217
>gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri]
Length = 240
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/239 (78%), Positives = 202/239 (84%), Gaps = 5/239 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MTSQISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN+VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P N+Y+++AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVPIQV 235
VLGIKVKIML WDPNGK GP PLPD V+I PK E E Y +P + D PI V
Sbjct: 181 VLGIKVKIMLPWDPNGKLGPKRPLPDHVSIVEPKPETLPTEPYSEPK-IGADKGAPIPV 238
>gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis]
Length = 243
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/232 (79%), Positives = 201/232 (86%), Gaps = 3/232 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTAISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +NSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFIDNSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
VLGIKVKIML +DP GKQGP PLPD V++ PK+E PT+ +++ +VP
Sbjct: 181 VLGIKVKIMLPFDPAGKQGPKKPLPDNVSVVDPKEEP---LPTMPSSESKVP 229
>gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/216 (84%), Positives = 192/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK P PLPD V+I PK+E
Sbjct: 181 VLGIKVKIMLPWDPTGKIVPKKPLPDHVSIVEPKEE 216
>gi|443732033|gb|ELU16925.1| hypothetical protein CAPTEDRAFT_171942 [Capitella teleta]
Length = 242
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 191/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVA+GVF AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVANGVFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVDKAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGI+VKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIQVKIMLPWDPTGKIGPKRPLPDHVSIVEPKDE 216
>gi|355752470|gb|EHH56590.1| hypothetical protein EGM_06037 [Macaca fascicularis]
Length = 243
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/216 (84%), Positives = 191/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE+ YSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEECYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRR RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRTRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
>gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus]
Length = 245
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 192/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGV VRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVGVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMK DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKSVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKEPLPDHVSIVEPKDE 216
>gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea]
Length = 234
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/222 (81%), Positives = 192/222 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA Q+SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAAQVSKKRKFVNDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFPEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG M+ SG+P EY+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGEPSREYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WD GK GP PLPD V I PKDE P
Sbjct: 181 VLGIKVKIMLPWDQTGKIGPKKPLPDNVNIVEPKDESTPATP 222
>gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis]
Length = 213
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 180/213 (84%), Positives = 190/213 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQNVLG
Sbjct: 1 MATPISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE++VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
VLGIKVKIML WDP GK GP PLPD V+I P
Sbjct: 181 VLGIKVKIMLPWDPTGKLGPKRPLPDHVSIVEP 213
>gi|338726172|ref|XP_003365268.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
Length = 243
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 191/216 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKR+FVA G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRQFVAHGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVAKRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AV HVLLRQG
Sbjct: 121 GVLRFTMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVCHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona
intestinalis]
Length = 260
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/222 (81%), Positives = 192/222 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE+L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKF ++ VELYAEKV NRGLCA AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG M+ SG PV EY+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVREYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDP GK GP PLPD V I PKDEE P
Sbjct: 181 VLGIKVKIMLPWDPQGKIGPKKPLPDNVNIVEPKDEEAITGP 222
>gi|386869503|ref|NP_001247435.1| 40S ribosomal protein S3 isoform 2 [Homo sapiens]
gi|397487321|ref|XP_003814751.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Pan paniscus]
Length = 259
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 186/232 (80%), Positives = 193/232 (83%), Gaps = 16/232 (6%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVEL----------------YAEKVNNRGLCAIAQAES 104
EKGRRIRELT+VVQKRF FPE SVEL YAEKV RGLCAIAQAES
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAES 120
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPV 164
LRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PV
Sbjct: 121 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPV 180
Query: 165 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
N Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 NYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 232
>gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
Length = 238
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/230 (78%), Positives = 199/230 (86%), Gaps = 3/230 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KG+RIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 DKGKRIRELTSVVQKRFNFPEGTVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P N+Y+D A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDCATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
VLGIKVKIML DPNGK GP PLPD V + PK+E + PT+ ++D++
Sbjct: 181 VLGIKVKIMLRCDPNGKVGPKKPLPDCVEVPGPKEE---IIPTVPSSDLK 227
>gi|156553282|ref|XP_001599651.1| PREDICTED: 40S ribosomal protein S3-like [Nasonia vitripennis]
Length = 242
Score = 367 bits (941), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 180/233 (77%), Positives = 195/233 (83%), Gaps = 3/233 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEK
Sbjct: 4 TTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPQRTEIILMATHTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF F ++SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNFKDHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL---VATDIEVP 232
GIKVKIML WDPNGK GP PLPD V + PK+E Y P V D+ P
Sbjct: 184 GIKVKIMLPWDPNGKNGPKKPLPDNVIVQEPKEETLYSAPASEAKVVKDLPAP 236
>gi|332220518|ref|XP_003259402.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Nomascus
leucogenys]
gi|441635552|ref|XP_003259404.2| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Nomascus
leucogenys]
gi|441635555|ref|XP_004089921.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635558|ref|XP_004089922.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635561|ref|XP_004089923.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635564|ref|XP_004089924.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635567|ref|XP_004089925.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635570|ref|XP_004089926.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635573|ref|XP_004089927.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
Length = 243
Score = 366 bits (939), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 190/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M QISKKRKF+ADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MVVQISKKRKFIADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIPELTAVVQKRFGFPEGIVELYAEKVATRGLCAIAQAESLRYKLVGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFI+ESGAKGC+V+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIIESGAKGCKVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPKDE 216
>gi|412989948|emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]
Length = 233
Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 177/227 (77%), Positives = 196/227 (86%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TP++ EIIIRATRTQNVLGE
Sbjct: 7 SLNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRSTPVKMEIIIRATRTQNVLGE 66
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRF F E +VELYAEKV NRGLCAI+Q ESLRYKLLGGLAVRRACYG
Sbjct: 67 KGRRIRELTSLVQKRFGFAEGAVELYAEKVANRGLCAISQCESLRYKLLGGLAVRRACYG 126
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIME+GAKG EVIVSGKLR QRAK+MKFKDGYM+SSG PV EYI S+ RHVLLRQGV
Sbjct: 127 VLRFIMENGAKGAEVIVSGKLRGQRAKAMKFKDGYMISSGNPVREYIVSSTRHVLLRQGV 186
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
+GIKVKIML DP G+ GP TP+PD + I PK++E KP + A +
Sbjct: 187 VGIKVKIMLDHDPKGRMGPKTPIPDTIIIKEPKEDENMAKPIIGAEN 233
>gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 237
Score = 365 bits (938), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 177/222 (79%), Positives = 194/222 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+TQISKKRKFV+DGVF AELNE LTRELAEDGYSGVEV V P+RTEIII ATRTQNVLG
Sbjct: 1 MSTQISKKRKFVSDGVFKAELNEFLTRELAEDGYSGVEVHVAPLRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTSVVQKRF FPENSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 DKGRRIRELTSVVQKRFSFPENSVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTACRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML +D GK GP PLPD V++ PK+E+ P
Sbjct: 181 VLGIKVKIMLPFDVTGKSGPRKPLPDTVSVAEPKEEDIPANP 222
>gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus]
Length = 238
Score = 365 bits (937), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 180/215 (83%), Positives = 190/215 (88%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 4 TTISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNFPEGSVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++AVRHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGNPTNDYVETAVRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
GIKVKIML WDP GK GP PLPD V+I PK+EE
Sbjct: 184 GIKVKIMLPWDPVGKIGPKNPLPDNVSITEPKEEE 218
>gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 365 bits (937), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 173/215 (80%), Positives = 192/215 (89%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ Q+SK+RKFVADGVF AE+NE TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 5 SAQLSKRRKFVADGVFNAEINEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRFKFPENS+ELYAEKV NRGL A+AQAESLRYKLLGGLAVRRACYG
Sbjct: 65 KGRRIRELTSLVQKRFKFPENSLELYAEKVQNRGLSAVAQAESLRYKLLGGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAK+MKF DG+M+ SGQP +++D AVRHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPARDFVDQAVRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
LGIKVKIM +WDP GK GP+TPLPD +TI PK+E
Sbjct: 185 LGIKVKIMKAWDPEGKLGPSTPLPDQITILDPKEE 219
>gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus]
Length = 243
Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/222 (80%), Positives = 191/222 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDPNGK GP PLPD V++ PKDE Y P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 222
>gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST]
gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST]
Length = 244
Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 178/222 (80%), Positives = 191/222 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNTVSKKRRFVANGMFHAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VV+KRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVRKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDPNGK GP PLPD V++ PKDE Y P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSSP 222
>gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti]
gi|108875827|gb|EAT40052.1| AAEL008192-PA [Aedes aegypti]
Length = 243
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/222 (80%), Positives = 191/222 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDPNGK GP PLPD V++ PKDE Y P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 222
>gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 250
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/222 (80%), Positives = 191/222 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNVVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P NEY+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML WDPNGK GP PLPD V++ PKDE Y P
Sbjct: 181 VLGIKVKIMLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 222
>gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex]
Length = 242
Score = 363 bits (933), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/217 (83%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MAT QISKKRKFVA GVF AELN LTRELAEDGYSGVEVR+ P RTEIII ATRTQNVL
Sbjct: 1 MATAQISKKRKFVAGGVFKAELNAFLTRELAEDGYSGVEVRLAPTRTEIIILATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 61 GEKGRRIRELTSVVQKRFGFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P N Y+D+AVRHVLLRQ
Sbjct: 121 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNVYVDTAVRHVLLRQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GVLGIKVKIML WDPN K GP PLPD V+I PKDE
Sbjct: 181 GVLGIKVKIMLPWDPNNKNGPKRPLPDNVSILEPKDE 217
>gi|72058324|ref|XP_798304.1| PREDICTED: 40S ribosomal protein S3-A-like [Strongylocentrotus
purpuratus]
Length = 279
Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/222 (80%), Positives = 194/222 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F EN+VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFNFAENTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PV +Y+D A+RHV+LRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGAPVKDYVDVAIRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIM +D GK GP PLPD+++I PK+EE +P
Sbjct: 181 VLGIKVKIMRPFDVTGKTGPKKPLPDVISISEPKEEEIPSQP 222
>gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus]
Length = 243
Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 180/216 (83%), Positives = 189/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRH +
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHPSVPFS 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|442755587|gb|JAA69953.1| Putative 40s ribosomal protein s3 [Ixodes ricinus]
Length = 243
Score = 362 bits (930), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 190/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MANPISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P N+Y+++AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML DPNGK GP PLPD VTI PK E
Sbjct: 181 VLGIKVKIMLPCDPNGKLGPKKPLPDHVTIMEPKKE 216
>gi|395521196|ref|XP_003764704.1| PREDICTED: 40S ribosomal protein S3 [Sarcophilus harrisii]
Length = 245
Score = 362 bits (929), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 177/207 (85%), Positives = 186/207 (89%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
+FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIREL
Sbjct: 12 QFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 71
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES
Sbjct: 72 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 131
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
GAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIM
Sbjct: 132 GAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM 191
Query: 190 LSWDPNGKQGPTTPLPDLVTIHSPKDE 216
L WDP+GK GP PLPD V+I PKDE
Sbjct: 192 LPWDPSGKIGPKKPLPDHVSIVEPKDE 218
>gi|221126927|ref|XP_002162713.1| PREDICTED: 40S ribosomal protein S3-like [Hydra magnipapillata]
Length = 239
Score = 362 bits (928), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 179/223 (80%), Positives = 191/223 (85%), Gaps = 1/223 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+ACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+RFIMESGAKGCEVIVSGKLR QRAKSMKF DG+M+ SG P+ EYID+AVRHV LRQG
Sbjct: 121 GVVRFIMESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIML WDP GK GP PLPD V+I PK EE + PT
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPK-EEVFYPPT 222
>gi|332375642|gb|AEE62962.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 179/235 (76%), Positives = 198/235 (84%), Gaps = 3/235 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENS+ LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSIVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
VLGIKVKIML +DP GK GP PLPD V++ PKDE V PT+ +++I+ + V
Sbjct: 181 VLGIKVKIMLPYDPTGKIGPKKPLPDNVSVVEPKDE---VVPTVPSSEIKADVPV 232
>gi|449885323|gb|AGF29412.1| ribosomal protein S3 [Phaedon cochleariae]
Length = 240
Score = 361 bits (926), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 182/242 (75%), Positives = 198/242 (81%), Gaps = 8/242 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE------EEYVKPTLVATDIEVPIQ 234
VLGIKVKIML WDP+GK GP PLPD V++ PK+E +KP V +D + I
Sbjct: 181 VLGIKVKIMLPWDPSGKTGPKKPLPDNVSVVEPKEEILPLFPSSEIKP--VKSDAPLAIP 238
Query: 235 VA 236
VA
Sbjct: 239 VA 240
>gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca]
Length = 233
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/206 (85%), Positives = 185/206 (89%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V+I PKDE
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKDE 206
>gi|62645168|ref|XP_575143.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
gi|109470011|ref|XP_001057158.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
Length = 243
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 179/216 (82%), Positives = 190/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYS VEVRVTP RTEIII TRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQK+F FPE SVELYAEKV GLCAIAQAESL YKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGA+GCEV+VSGKLR QRAKS+KF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAEGCEVVVSGKLRGQRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
>gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum]
gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum]
Length = 241
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 175/216 (81%), Positives = 188/216 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V++ PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKTGPKKPLPDNVSVVEPKEE 216
>gi|384497979|gb|EIE88470.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 241
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 171/223 (76%), Positives = 194/223 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+A QISKKRKFVADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLG
Sbjct: 4 VAAQISKKRKFVADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRRACY
Sbjct: 64 EKGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACY 123
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKGCEV+VSGK+RA RAK+MKF DG+M+ SG P E+I +AVRHV LRQG
Sbjct: 124 GVIRFVMESGAKGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQG 183
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIML DP G+ GP LPD+VTI PKDE +P+
Sbjct: 184 VLGIKVKIMLDNDPTGRNGPKQTLPDIVTILEPKDEAPITEPS 226
>gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris]
Length = 238
Score = 360 bits (923), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 178/222 (80%), Positives = 190/222 (85%), Gaps = 1/222 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLGE
Sbjct: 1 AAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+ACYG
Sbjct: 61 KGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
V+RFIMESGAKGCEVIVSGKLR QRAKSMKF DG+M+ SG P+ EYID+AVRHV LRQGV
Sbjct: 121 VVRFIMESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGV 180
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
LGIKVKIML WDP GK GP PLPD V+I PK EE + PT
Sbjct: 181 LGIKVKIMLPWDPTGKTGPKKPLPDHVSIVEPK-EEVFYPPT 221
>gi|452821888|gb|EME28913.1| 40S ribosomal protein S3e [Galdieria sulphuraria]
Length = 227
Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 171/217 (78%), Positives = 196/217 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT +SKKR+ VADGVF AELNE L REL+E+GYSGVEV+ TP+RTEI+IRATRTQNVLG
Sbjct: 1 MATLMSKKRRAVADGVFKAELNEFLMRELSEEGYSGVEVKPTPLRTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF+FPE +VELYAEKV +RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFRFPEGTVELYAEKVADRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGC V VSG LRAQRAK+MKF DGYMV SGQPV +Y+D+AVRHVL+RQG
Sbjct: 121 GVLRFVMESGAKGCVVTVSGLLRAQRAKTMKFTDGYMVHSGQPVKDYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VLGIKV IML +DP GK+GP+ PLPD V I+ PK+++
Sbjct: 181 VLGIKVTIMLPYDPEGKKGPSKPLPDNVQIYEPKEDK 217
>gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremula]
Length = 240
Score = 358 bits (920), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 178/239 (74%), Positives = 192/239 (80%), Gaps = 6/239 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EK RRIRELTSVVQKRF FPE SV LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACY
Sbjct: 61 EKNRRIRELTSVVQKRFNFPEGSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR+IME GAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+D+A RHVLLRQG
Sbjct: 121 GVLRYIMECGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE------EEYVKPTLVATDIEVPI 233
VLGIKVKIML WD GK GP PLPD V + PKDE +KP V + +P+
Sbjct: 181 VLGIKVKIMLPWDATGKTGPKKPLPDNVAVAEPKDEILPLYPSSEIKPIKVDAPLAIPV 239
>gi|1350990|sp|P48153.1|RS3_MANSE RecName: Full=40S ribosomal protein S3
gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta]
Length = 243
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 188/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPT 224
>gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori]
gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 358 bits (919), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 189/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPT 224
>gi|358056010|dbj|GAA98355.1| hypothetical protein E5Q_05041 [Mixia osmundae IAM 14324]
Length = 270
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/235 (74%), Positives = 194/235 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+T ISK+RKFVADGVF+AEL+E TREL+ +GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSTTISKRRKFVADGVFYAELSEFFTRELSSEGYSGCEVRVTRARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKF E SVELYAEKV NRGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFGEGSVELYAEKVQNRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDQAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
VLGIKVKIM WDP G+ GP+ PLPD VTI K+E P+ V I +Q+
Sbjct: 181 VLGIKVKIMKGWDPEGRTGPSKPLPDSVTIMDAKEEAPVGPPSSVGRGITADLQL 235
>gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula]
Length = 246
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/222 (79%), Positives = 189/222 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA Q SKKRKFVADG+F AELN L+REL+EDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQTSKKRKFVADGIFKAELNNFLSRELSEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FP+ +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPDGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEVIVSGKLR QRAKSMKF DG+M+ SG P EYIDSAV HV LRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRGQRAKSMKFVDGFMIHSGFPTKEYIDSAVTHVHLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIML DP GK GP PLPD V++ PKD+ +P
Sbjct: 181 VLGIKVKIMLPHDPTGKSGPKKPLPDQVSVVEPKDDVRVTEP 222
>gi|357611706|gb|EHJ67618.1| 40S ribosomal protein S3 [Danaus plexippus]
Length = 245
Score = 358 bits (918), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 189/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPT 224
>gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 241
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 188/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPT 224
>gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 185/206 (89%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V+I PK+E
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKEE 206
>gi|389608265|dbj|BAM17744.1| ribosomal protein S3 [Papilio xuthus]
Length = 244
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 188/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE +PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPIPTEPT 224
>gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia]
Length = 243
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 188/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPT 224
>gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar]
Length = 244
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/216 (82%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESG+KGCEV+VSGKLR QRAKSMKF G M+ SG PVN Y+D+A+ V +RQG
Sbjct: 121 GVLRFIMESGSKGCEVVVSGKLRGQRAKSMKFVGGLMIHSGDPVNYYVDTAM-EVGIRQG 179
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 180 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 215
>gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus]
Length = 242
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/227 (78%), Positives = 196/227 (86%), Gaps = 4/227 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
IKVKIML WDPNGK GP PLPD V+I PK+E V P++ ++++
Sbjct: 186 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEE---VPPSVPISEVK 229
>gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus]
Length = 248
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 172/210 (81%), Positives = 185/210 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M +SKKRKFVADGVF AELNE L RELAEDGYSGV++RVTP RTEIII ATRTQNVLG
Sbjct: 1 MTRTVSKKRKFVADGVFKAELNEFLMRELAEDGYSGVQIRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFP+ S+ELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPDGSIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P +Y+D+A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPCVDYVDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTI 210
VLGIKVKIML WDP GK GP PLPD V +
Sbjct: 181 VLGIKVKIMLPWDPTGKNGPKKPLPDNVNV 210
>gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda]
Length = 243
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 188/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPERSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPT 224
>gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 178/227 (78%), Positives = 196/227 (86%), Gaps = 4/227 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
IKVKIML WDPNGK GP PLPD V+I PK+E V P++ ++++
Sbjct: 186 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEE---VPPSVPISEVK 229
>gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/227 (78%), Positives = 196/227 (86%), Gaps = 4/227 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
IKVKIML WDPNGK GP PLPD V+I PK+E V P++ ++++
Sbjct: 186 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEE---VPPSVPISEVK 229
>gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta]
Length = 257
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/239 (76%), Positives = 198/239 (82%), Gaps = 10/239 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 21 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 80
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 81 RIRELTSVVQKRFNFKEPQNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVL 140
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 141 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 200
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE------EEYVKPTLVATDIEVPIQVA 236
IKVKIML WDPNGK GP PLPD V+I PK+E VKP+ D+ PI +A
Sbjct: 201 IKVKIMLPWDPNGKSGPKKPLPDYVSIVEPKEEIPPSVPMSEVKPS---KDLPQPIPLA 256
>gi|389610621|dbj|BAM18922.1| ribosomal protein S3 [Papilio polytes]
Length = 244
Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 188/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE +PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPIPTEPT 224
>gi|354501651|ref|XP_003512903.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 247
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 183/206 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 15 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 74
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLC AQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 75 AVVQKRFGFPEGSVELYAEKVATRGLCGSAQAESLRYKLLGGLAVRRACYGVLRFIMESG 134
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 135 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 194
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V+I PKDE
Sbjct: 195 PWDPSGKIGPKKPLPDHVSIVEPKDE 220
>gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor]
Length = 250
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 178/235 (75%), Positives = 194/235 (82%), Gaps = 7/235 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA ISKKRKFV +G+F AELNE LTR+LAEDGYSGVE+RVTP RTEIII AT+T NVLG
Sbjct: 1 MALPISKKRKFVLNGIFKAELNEFLTRQLAEDGYSGVEIRVTPTRTEIIIMATKTLNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N Y+DSA RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNAYVDSATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE-------EYVKPTLVATD 228
VLGIKVKIML +DPNGK GP PLPD VT+ PK+E+ EYV P A++
Sbjct: 181 VLGIKVKIMLPYDPNGKIGPKKPLPDNVTVIEPKEEQIYEQPETEYVTPQAAASE 235
>gi|402244315|emb|CBW52775.1| 40S ribosomal protein S3 [Polytomella sp. Pringsheim 198.80]
Length = 225
Score = 356 bits (914), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 172/213 (80%), Positives = 193/213 (90%), Gaps = 2/213 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
QISK +KFV DGVF AELNE+LTRELAEDGYSGVEVR++P+RTEIIIRATRTQNVLGE+
Sbjct: 14 AQISKAKKFVRDGVFRAELNELLTRELAEDGYSGVEVRLSPVRTEIIIRATRTQNVLGEQ 73
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSV+QKRFK ++V+L+AE+V+ RGLCAIAQAESLRYKLLGGLAVRRACYGV
Sbjct: 74 GRRIRELTSVIQKRFKI--DNVQLFAEEVSARGLCAIAQAESLRYKLLGGLAVRRACYGV 131
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LR++MESGAKGCEVI+SGKLRAQRAKSMKFKDGYMVSSG YIDSAVRHVLLRQGVL
Sbjct: 132 LRYVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMVSSGNSSRTYIDSAVRHVLLRQGVL 191
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
GIKVKIM WDP G++GP TPLPD+V + PK+
Sbjct: 192 GIKVKIMKDWDPTGRRGPKTPLPDMVKVLDPKE 224
>gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|403182936|gb|EJY57732.1| AAEL008192-PB [Aedes aegypti]
Length = 256
Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 174/214 (81%), Positives = 186/214 (86%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
R+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRE
Sbjct: 22 RQFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRE 81
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIME
Sbjct: 82 LTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 141
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P NEY+D+A RHVLLRQGVLGIKVKI
Sbjct: 142 SGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKI 201
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
ML WDPNGK GP PLPD V++ PKDE Y P
Sbjct: 202 MLPWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 235
>gi|342356327|gb|AEL28822.1| ribosomal protein S3 [Heliconius melpomene cythera]
Length = 242
Score = 356 bits (913), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 187/221 (84%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIML WD GK GP P PD + + PKDE +PT
Sbjct: 184 GIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPSEPT 224
>gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula]
Length = 211
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 183/206 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTR LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRGLAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGRVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V+I PKDE
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKDE 206
>gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus]
Length = 211
Score = 356 bits (913), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 184/206 (89%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKI L
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKITL 180
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V+I PK+E
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVVPKEE 206
>gi|340710430|ref|XP_003393793.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 179/236 (75%), Positives = 198/236 (83%), Gaps = 4/236 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQNVLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQNVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL---VATDIEVPIQVA 236
IKVKIML +DP+GK GP PLPD V+I PKDE +PT + D+ PI +A
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEVKASKDLPQPIPLA 241
>gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi]
Length = 211
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 175/206 (84%), Positives = 184/206 (89%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG KGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGGKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG
Sbjct: 61 AVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIML 180
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V+I PK+E
Sbjct: 181 PWDPSGKIGPKKPLPDHVSIVEPKEE 206
>gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 173/221 (78%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PKDE V+P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKDEAPVVQP 225
>gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens]
gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens]
Length = 228
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 172/220 (78%), Positives = 189/220 (85%), Gaps = 2/220 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A ISKKRKFVADG+F AELN L+RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 3 AASISKKRKFVADGIFRAELNNFLSRELAEDGYSGVEVRVTPTRTEIIISATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIREL S++QKRF FPE+SVE+YAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYG
Sbjct: 63 KGRRIRELMSLIQKRFNFPEDSVEIYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCE++VSGKLR QRAKSMKF DG M+ +GQP +Y+D+A+RHV LRQGV
Sbjct: 123 VLRFIMESGAKGCEIVVSGKLRGQRAKSMKFVDGLMIHTGQPCVDYVDTAIRHVYLRQGV 182
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE--EEY 219
LGIKVKIML DP GK GP PLPD V+I PK E E+Y
Sbjct: 183 LGIKVKIMLPTDPTGKSGPKKPLPDYVSISEPKSEVFEQY 222
>gi|340959617|gb|EGS20798.1| 40S ribosomal protein S3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 254
Score = 355 bits (911), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 189/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+ID+A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAREFIDTATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP+GK GP LPD+VT+ PK+E V+P
Sbjct: 185 LGIKVKIMRGSDPDGKSGPQKTLPDVVTVIEPKEETPVVQP 225
>gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi]
Length = 278
Score = 355 bits (911), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 175/212 (82%), Positives = 184/212 (86%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 46 FVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELT 105
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SVVQKRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESG
Sbjct: 106 SVVQKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 165
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG P NEY+D+A RHVLLRQGVLGIKVKIML
Sbjct: 166 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIML 225
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
WDPNGK GP PLPD V++ PKDE Y P
Sbjct: 226 PWDPNGKIGPKKPLPDNVSVVEPKDEIMYSTP 257
>gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes]
Length = 234
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 175/226 (77%), Positives = 193/226 (85%), Gaps = 3/226 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 8 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIILMATHTQSVLGEKGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 68 RIRELTSVVQKRFGFKDGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P +Y+D+A RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTADYVDTATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
KVKIML WD NGK GP PLPD V++ PK+E P + ++DI+
Sbjct: 188 KVKIMLPWDQNGKTGPKKPLPDNVSVAEPKEEN---IPLMPSSDIK 230
>gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus]
Length = 206
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/200 (86%), Positives = 181/200 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+A+RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGP 200
LGIKVKIML WD GK GP
Sbjct: 181 GLGIKVKIMLPWDTTGKMGP 200
>gi|402086493|gb|EJT81391.1| 40S ribosomal protein S3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 263
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 174/225 (77%), Positives = 190/225 (84%), Gaps = 3/225 (1%)
Query: 1 MAT---QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57
MAT QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MATPGAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLL 177
ACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLL
Sbjct: 121 ACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLL 180
Query: 178 RQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
RQGVLGIKVKIM DP GK GP LPD VTI PK+E+ V+P
Sbjct: 181 RQGVLGIKVKIMRGSDPEGKAGPQKSLPDAVTILEPKEEQPVVQP 225
>gi|345570572|gb|EGX53393.1| hypothetical protein AOL_s00006g259 [Arthrobotrys oligospora ATCC
24927]
Length = 270
Score = 355 bits (910), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 189/221 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISK+RK VADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 5 TAISKRRKAVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 65 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGVL
Sbjct: 125 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVL 184
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIM DP+GK GP LPD VTI PK+E+ + P
Sbjct: 185 GIKVKIMRGSDPDGKAGPNKSLPDTVTIIEPKEEQPVLAPN 225
>gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae
ARSEF 23]
Length = 257
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 190/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+ID+A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP+GK GP+ LPD VTI PK+E+ ++P
Sbjct: 185 LGIKVKIMRGSDPDGKAGPSKSLPDAVTIFEPKEEQVVLQP 225
>gi|429856532|gb|ELA31437.1| 40s ribosomal protein s3 [Colletotrichum gloeosporioides Nara gc5]
Length = 259
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD V+I PK+E+ V+P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVSILEPKEEQSVVQP 225
>gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator]
Length = 242
Score = 354 bits (909), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 177/220 (80%), Positives = 190/220 (86%), Gaps = 1/220 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEPQNVELYAEKVAVRGLCAIAQAESLRYKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
IKVKIML WDP GK GP PLPD V+I PKDE ++P
Sbjct: 186 IKVKIMLPWDPVGKTGPKKPLPDYVSIAEPKDEIPPLQPN 225
>gi|296423595|ref|XP_002841339.1| 40S ribosomal protein S3 [Tuber melanosporum Mel28]
gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum]
Length = 360
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 188/219 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 88 ISKRRKFVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 147
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 148 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLR 207
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 208 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDSATRHVLLRQGVLGI 267
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
KVKIM DP+GK GP LPD VT+ PK+E +P+
Sbjct: 268 KVKIMRGSDPDGKSGPQKSLPDTVTVIEPKEEAPIGQPS 306
>gi|407924047|gb|EKG17107.1| Ribosomal protein S3 [Macrophomina phaseolina MS6]
Length = 265
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 190/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV+NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 66 QGRRIRELTSLIQKRFKFPENSVSLYAAKVSNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++ID+A RHVLLRQGV
Sbjct: 126 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAHDFIDTATRHVLLRQGV 185
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ V+P
Sbjct: 186 LGIKVKIMRGSDPEGKAGPQKSLPDSVTIIEPKEEQPIVQP 226
>gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|346971436|gb|EGY14888.1| 40S ribosomal protein S3 [Verticillium dahliae VdLs.17]
Length = 262
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ V+P
Sbjct: 185 LGIKVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEEQSVVQP 225
>gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera]
gi|380026164|ref|XP_003696828.1| PREDICTED: 40S ribosomal protein S3-like [Apis florea]
Length = 242
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 178/236 (75%), Positives = 198/236 (83%), Gaps = 4/236 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL---VATDIEVPIQVA 236
IKVKIML +DP+GK GP PLPD V+I PKDE +PT + D+ PI +A
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEVKASKDLPQPIPLA 241
>gi|340710439|ref|XP_003393797.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 353 bits (907), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/236 (75%), Positives = 198/236 (83%), Gaps = 4/236 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL---VATDIEVPIQVA 236
IKVKIML +DP+GK GP PLPD V+I PKDE +PT + D+ PI +A
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEVKASKDLPQPIPLA 241
>gi|350427313|ref|XP_003494719.1| PREDICTED: 40S ribosomal protein S3-like [Bombus impatiens]
Length = 242
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 178/236 (75%), Positives = 198/236 (83%), Gaps = 4/236 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL---VATDIEVPIQVA 236
IKVKIML +DP+GK GP PLPD V+I PKDE +PT + D+ PI +A
Sbjct: 186 IKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPSQPTSEVKASKDLPQPIPLA 241
>gi|340522228|gb|EGR52461.1| 40s ribosomal protein [Trichoderma reesei QM6a]
Length = 264
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 187/220 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+
Sbjct: 6 AQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVL 185
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 186 GIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEEQAVLQP 225
>gi|367027792|ref|XP_003663180.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
gi|347010449|gb|AEO57935.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
Length = 260
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E V+P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEEAPVVQP 225
>gi|367049518|ref|XP_003655138.1| 40S ribosomal protein S3 [Thielavia terrestris NRRL 8126]
gi|347002402|gb|AEO68802.1| hypothetical protein THITE_2155431 [Thielavia terrestris NRRL 8126]
Length = 260
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E V+P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEETPVVQP 225
>gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001]
Length = 261
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD V++ PK+E+ V+P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQAVVQP 225
>gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+]
gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+]
Length = 262
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 172/221 (77%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E V+P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIDPKEETPVVQP 225
>gi|380470676|emb|CCF47635.1| 40S ribosomal protein S3 [Colletotrichum higginsianum]
Length = 261
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD V++ PK+E+ V+P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQTVVQP 225
>gi|164429154|ref|XP_956174.2| 40S ribosomal protein S3 [Neurospora crassa OR74A]
gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
gi|336470035|gb|EGO58197.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2508]
gi|350290273|gb|EGZ71487.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2509]
Length = 262
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ +P
Sbjct: 185 LGIKVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEEQPVTQP 225
>gi|383851993|ref|XP_003701515.1| PREDICTED: 40S ribosomal protein S3-like [Megachile rotundata]
Length = 242
Score = 353 bits (905), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 178/236 (75%), Positives = 196/236 (83%), Gaps = 4/236 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRRACYGVL
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P NEY+++A RHVLLRQGVLG
Sbjct: 126 RFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL---VATDIEVPIQVA 236
IKVKIML +DP GK GP PLPD V+I PKDE +PT + DI P +A
Sbjct: 186 IKVKIMLPYDPQGKTGPKKPLPDSVSIVEPKDEIFPSQPTSEVKASKDIPQPTSLA 241
>gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3 [Talaromyces stipitatus ATCC 10500]
gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
Length = 266
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 173/223 (77%), Positives = 189/223 (84%), Gaps = 2/223 (0%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GVLGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 183 GVLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPILQP 225
>gi|378725981|gb|EHY52440.1| 40S ribosomal protein S3 [Exophiala dermatitidis NIH/UT8656]
Length = 262
Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 174/225 (77%), Positives = 189/225 (84%), Gaps = 3/225 (1%)
Query: 1 MATQ---ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57
M TQ ISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MTTQPGAISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLL 177
ACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP NE+ID A RHVLL
Sbjct: 121 ACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPANEFIDHATRHVLL 180
Query: 178 RQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
RQGVLGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 181 RQGVLGIKVKIMRGSDPEGKAGPQKSLPDSVTIIDPKEEQPILQP 225
>gi|336268268|ref|XP_003348899.1| 40S ribosomal protein S3 [Sordaria macrospora k-hell]
gi|380094158|emb|CCC08375.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 262
Score = 352 bits (904), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ +P
Sbjct: 185 LGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPVTQP 225
>gi|440639340|gb|ELR09259.1| small subunit ribosomal protein S3e [Geomyces destructans 20631-21]
Length = 262
Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 187/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKF+ADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFIADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 189
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GPT LPD VTI PK+E+ V+P
Sbjct: 190 KVKIMRGSDPEGKAGPTKSLPDSVTIIEPKNEDPVVQP 227
>gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88]
gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger]
gi|350630615|gb|EHA18987.1| hypothetical protein ASPNIDRAFT_202416 [Aspergillus niger ATCC
1015]
gi|358366728|dbj|GAA83348.1| 40S ribosomal protein S3 [Aspergillus kawachii IFO 4308]
Length = 266
Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQPVLQP 225
>gi|302904072|ref|XP_003048997.1| 40S ribosomal protein S3 [Nectria haematococca mpVI 77-13-4]
gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 260
Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQP 225
>gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3]
gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC
18188]
Length = 270
Score = 352 bits (903), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 187/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 225
>gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3 [Talaromyces marneffei ATCC 18224]
gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Talaromyces marneffei ATCC
18224]
Length = 266
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 173/223 (77%), Positives = 189/223 (84%), Gaps = 2/223 (0%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GVLGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 183 GVLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPILQP 225
>gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 270
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+EE + P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHP 225
>gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293]
gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3 [Neosartorya fischeri NRRL 181]
gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293]
gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163]
Length = 266
Score = 352 bits (902), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 225
>gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40]
gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3 [Aspergillus flavus NRRL3357]
gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
gi|391863281|gb|EIT72592.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 266
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 225
>gi|389751372|gb|EIM92445.1| ribosomal protein S3 [Stereum hirsutum FP-91666 SS1]
Length = 267
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/234 (72%), Positives = 194/234 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLA+RRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAIRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQ 234
VLGIKVKIM WDP G+ GP PLPD V I P ++ +P+ + +P+Q
Sbjct: 181 VLGIKVKIMKGWDPEGQLGPKKPLPDSVQILEPPVDKIVSEPSSEQREPAIPVQ 234
>gi|302695173|ref|XP_003037265.1| 40S ribosomal protein S3 [Schizophyllum commune H4-8]
gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
Length = 266
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/213 (81%), Positives = 185/213 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELN+ TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAQISKKRKFVADGVFRAELNDFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSLVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFVDFAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
VLGIKVKIM WDP G GP PLPD VTI P
Sbjct: 181 VLGIKVKIMKGWDPEGLVGPKKPLPDNVTILEP 213
>gi|361124160|gb|EHK96273.1| putative 40S ribosomal protein S3 [Glarea lozoyensis 74030]
Length = 263
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 186/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 7 GTAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 66
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 67 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 126
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGV
Sbjct: 127 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 186
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ V+P
Sbjct: 187 LGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQSVVQP 227
>gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3 [Aspergillus clavatus NRRL 1]
gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 225
>gi|293333308|ref|NP_001169131.1| uncharacterized protein LOC100382976 [Zea mays]
gi|223975097|gb|ACN31736.1| unknown [Zea mays]
Length = 266
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 173/223 (77%), Positives = 188/223 (84%), Gaps = 2/223 (0%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRAC
Sbjct: 63 GENGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQ
Sbjct: 123 YGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQ 182
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GVLGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 183 GVLGIKVKIMRGSDPEGKSGPQKTLPDAVTIIEPKEEQPILQP 225
>gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus]
Length = 220
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/214 (79%), Positives = 184/214 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGV
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGA+GCE +VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVL
Sbjct: 124 LRFIMESGARGCEAVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GIKV+IML WD GK GP P PD + + PKDE
Sbjct: 184 GIKVEIMLPWDXQGKNGPKRPQPDHILVTEPKDE 217
>gi|451847106|gb|EMD60414.1| hypothetical protein COCSADRAFT_40058 [Cochliobolus sativus ND90Pr]
Length = 265
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/220 (77%), Positives = 187/220 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GIKVKIM DP GK GP+ LPD VTI PK+E+ V+P
Sbjct: 186 GIKVKIMRGSDPEGKAGPSKSLPDAVTIIEPKEEQPVVQP 225
>gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18]
Length = 270
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/218 (78%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+EE + P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHP 225
>gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407]
Length = 264
Score = 351 bits (901), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 187/219 (85%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 7 QISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 67 RRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLG
Sbjct: 127 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLG 186
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IKVKIM DP+GK GP LPD VTI PK+E+ +P
Sbjct: 187 IKVKIMRGSDPDGKAGPQKTLPDAVTIIEPKEEQPVTQP 225
>gi|451997970|gb|EMD90435.1| hypothetical protein COCHEDRAFT_1157448 [Cochliobolus
heterostrophus C5]
Length = 265
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 170/220 (77%), Positives = 187/220 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GIKVKIM DP GK GP+ LPD VTI PK+E+ V+P
Sbjct: 186 GIKVKIMRGSDPEGKAGPSKSLPDSVTIIEPKEEQPVVQP 225
>gi|425768995|gb|EKV07505.1| hypothetical protein PDIP_73820 [Penicillium digitatum Pd1]
gi|425770579|gb|EKV09048.1| hypothetical protein PDIG_64480 [Penicillium digitatum PHI26]
Length = 264
Score = 351 bits (900), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 225
>gi|358383594|gb|EHK21258.1| hypothetical protein TRIVIDRAFT_78477 [Trichoderma virens Gv29-8]
Length = 263
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 186/220 (84%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+
Sbjct: 6 AQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVL 185
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GIKVKIM DP GK GP LPD VTI PK+E ++P
Sbjct: 186 GIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEEPAVLQP 225
>gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 225
>gi|408397169|gb|EKJ76319.1| hypothetical protein FPSE_03574 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQP 225
>gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR]
Length = 271
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/218 (77%), Positives = 187/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 225
>gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330936377|ref|XP_003305367.1| 40S ribosomal protein S3 [Pyrenophora teres f. teres 0-1]
gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
Length = 266
Score = 351 bits (900), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/220 (77%), Positives = 187/220 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GIKVKIM DP GK GP+ LPD VTI PK+E+ V+P
Sbjct: 186 GIKVKIMRGSDPEGKAGPSKSLPDSVTIIEPKEEQPVVQP 225
>gi|346319548|gb|EGX89149.1| cytoplasmic ribosomal protein subunit S3 [Cordyceps militaris CM01]
Length = 258
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMES AKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP N++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIDPKEEQPVLQP 225
>gi|389625837|ref|XP_003710572.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|351650101|gb|EHA57960.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|440467710|gb|ELQ36909.1| 40S ribosomal protein S3 [Magnaporthe oryzae Y34]
gi|440480625|gb|ELQ61280.1| 40S ribosomal protein S3 [Magnaporthe oryzae P131]
Length = 262
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/221 (76%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 AAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFP +SV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 66 QGRRIRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 126 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 185
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ V+P
Sbjct: 186 LGIKVKIMRGSDPEGKAGPQKSLPDAVTILEPKEEQPVVQP 226
>gi|342874800|gb|EGU76719.1| hypothetical protein FOXB_12740 [Fusarium oxysporum Fo5176]
Length = 260
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 187/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQP 225
>gi|426202100|gb|EKV52023.1| hypothetical protein AGABI2DRAFT_239505 [Agaricus bisporus var.
bisporus H97]
Length = 265
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/223 (76%), Positives = 191/223 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV E++D AVRHVLL+QG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM DP G+ GP PLPD V I+ P ++ ++P+
Sbjct: 181 VLGIKVKIMKGHDPEGQLGPKKPLPDAVQIYEPPVDKVVLEPS 223
>gi|393218435|gb|EJD03923.1| ribosomal protein S3 [Fomitiporia mediterranea MF3/22]
Length = 264
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/223 (76%), Positives = 189/223 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+MV SGQP +++D A RHVLL+QG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMVHSGQPARDFVDYAYRHVLLKQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM WDP G+ GP PLPD V I P ++ +PT
Sbjct: 181 VLGIKVKIMKGWDPEGQIGPKKPLPDSVQILDPPIDKIVAEPT 223
>gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa]
Length = 211
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/206 (82%), Positives = 183/206 (88%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELNE LTRELAEDGYSGVE+RVTP RTE+II ATRTQNVLGE+GRRIRELT
Sbjct: 1 FVADGVFKAELNEFLTRELAEDGYSGVEIRVTPSRTEVIILATRTQNVLGEEGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SV+QKRF FPE +VELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRRACYGVLRFIME+G
Sbjct: 61 SVIQKRFDFPEGNVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMENG 120
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D A+RHVLLRQGVLGIKVKIM
Sbjct: 121 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNHYVDMAIRHVLLRQGVLGIKVKIMR 180
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDE 216
WDP+GK GP PLPD V++ PK+E
Sbjct: 181 PWDPSGKIGPKKPLPDHVSVVEPKEE 206
>gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS]
gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3 [Coccidioides posadasii C735 delta SOWgp]
gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira]
gi|392871183|gb|EAS33062.2| 40S ribosomal protein [Coccidioides immitis RS]
Length = 263
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 225
>gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens]
Length = 231
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/216 (78%), Positives = 192/216 (88%), Gaps = 1/216 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADG+F+AELNE+LTRELAEDGY+GVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAT-ISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLG 59
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL+YKLLGGLAVRRACY
Sbjct: 60 EKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACY 119
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKG EV+VSGKLRAQRAK+MKF DGYM+ +G EY+DSAVRHVL+RQG
Sbjct: 120 GVVRFVMESGAKGVEVVVSGKLRAQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQG 179
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLG+KV IML D +GK GP L D+VTI PK+E
Sbjct: 180 VLGVKVSIMLPHDASGKTGPKNTLADVVTILEPKEE 215
>gi|422293192|gb|EKU20492.1| small subunit ribosomal protein S3e [Nannochloropsis gaditana
CCMP526]
Length = 243
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 170/222 (76%), Positives = 191/222 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M T ISKKRKF+ADGVF+AELNE+LTRELAEDGY+GVEVRV P+RTEIII ATRTQNVLG
Sbjct: 1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELT+V+QKRF FP+ VEL+AEKV +RGLCA AQAESL+YKLLGGLAVRRACY
Sbjct: 61 EKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+ME GAKG EVIVSGKLRAQRAKSMKF+DGYM+ SGQ EY+D AVRHVL+RQG
Sbjct: 121 GVLRFVMEQGAKGAEVIVSGKLRAQRAKSMKFQDGYMIKSGQAKREYVDYAVRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLG+KVKIML DP GK GP L D+V + PK+E E P
Sbjct: 181 VLGVKVKIMLPHDPAGKIGPKAKLSDVVNVLEPKEEIELPVP 222
>gi|358397895|gb|EHK47263.1| hypothetical protein TRIATDRAFT_298935 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 186/221 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 125 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E ++P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKSLPDAVTIIEPKEEAAVLQP 225
>gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
Length = 286
Score = 350 bits (897), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/211 (82%), Positives = 185/211 (87%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRR
Sbjct: 49 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 108
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT VVQ RF FPE SVELYAEKV RGLCAIAQAESLRY+LLGGLAVRRACYGVLRF
Sbjct: 109 IRELTVVVQTRFGFPEGSVELYAEKVAMRGLCAIAQAESLRYQLLGGLAVRRACYGVLRF 168
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRA+SMKF G ++ SG PVN Y D+AVRHVLLRQGVLGIK
Sbjct: 169 IMESGAKGCEVVVSGKLRGQRAQSMKFVGGLVIHSGDPVNYYSDTAVRHVLLRQGVLGIK 228
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VK+ML WDP+ K GP PLPD V++ PKDE
Sbjct: 229 VKLMLPWDPSRKIGPKKPLPDHVSMVEPKDE 259
>gi|400595104|gb|EJP62914.1| cytoplasmic ribosomal protein subunit S3 [Beauveria bassiana ARSEF
2860]
Length = 257
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/221 (76%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMES AKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP N++ID+A RHVLLRQGV
Sbjct: 125 VLRFIMESDAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPKNDFIDTATRHVLLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 185 LGIKVKIMRGSDPEGKAGPQKTLPDAVTIIDPKEEQPVLQP 225
>gi|396493922|ref|XP_003844188.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
Length = 264
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/220 (76%), Positives = 187/220 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 SAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGV
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVL
Sbjct: 126 LRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVL 185
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
GIKVKIM DP GK GP+ LPD VTI PK+E+ V+P
Sbjct: 186 GIKVKIMRGSDPEGKAGPSQTLPDSVTIIEPKEEQPVVQP 225
>gi|335345828|gb|AEH41494.1| 40S ribosomal protein S3 [Endocarpon pusillum]
Length = 264
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 184/218 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHV LRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVFLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP PD VTI PK+E+ V+P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSFPDSVTIIEPKEEQPVVQP 225
>gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
Length = 263
Score = 349 bits (896), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 225
>gi|340384078|ref|XP_003390542.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/219 (77%), Positives = 185/219 (84%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGC VIVSGKLR QRAKSMKF DG M+ +G P YID+AV HV LRQGVL
Sbjct: 122 LRFIMESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVL 181
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
GIKV+IML DP GK GP PLPD V++ PK+E Y +
Sbjct: 182 GIKVQIMLPHDPTGKMGPRKPLPDQVSVAEPKEETHYAE 220
>gi|426343098|ref|XP_004038155.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Gorilla gorilla
gorilla]
gi|426343100|ref|XP_004038156.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Gorilla gorilla
gorilla]
gi|426343102|ref|XP_004038157.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Gorilla gorilla
gorilla]
gi|426343104|ref|XP_004038158.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Gorilla gorilla
gorilla]
gi|426343106|ref|XP_004038159.1| PREDICTED: 40S ribosomal protein S3-like isoform 5 [Gorilla gorilla
gorilla]
gi|426343108|ref|XP_004038160.1| PREDICTED: 40S ribosomal protein S3-like isoform 6 [Gorilla gorilla
gorilla]
gi|426343110|ref|XP_004038161.1| PREDICTED: 40S ribosomal protein S3-like isoform 7 [Gorilla gorilla
gorilla]
Length = 243
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 172/216 (79%), Positives = 184/216 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKR FV DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQN+ G
Sbjct: 1 MAVQISKKRMFVTDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNIPG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAIVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGC+V+ SGKLR QRAKSMK DG M+ S P+N Y+ +AV HVLLRQG
Sbjct: 121 GVLRFIMESGAKGCKVVASGKLRGQRAKSMKSVDGLMIHSRDPINYYVGTAVCHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP GK GP PLPD V++ KDE
Sbjct: 181 VLGIKVKIMLPWDPTGKTGPKKPLPDHVSVVELKDE 216
>gi|388853822|emb|CCF52543.1| probable 40S ribosomal protein S3 [Ustilago hordei]
Length = 258
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 170/234 (72%), Positives = 194/234 (82%), Gaps = 2/234 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+M+ SGQPV +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGV 182
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
LGIKVKIM WDP G+ G PLPD VTI PK+E + P V+ + P +V
Sbjct: 183 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAP--VSESRQAPAEV 234
>gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans]
Length = 263
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 173/232 (74%), Positives = 193/232 (83%), Gaps = 3/232 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 23 MSLTISKKRKFVADGMFKAELNEFLTRELAEDGYSGVEVRVTPARTEIIIMATKTQQVLG 82
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 83 EKGRRIRELTAMVQKRFNFEPGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 142
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQG
Sbjct: 143 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 202
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
VLGIKVKIML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 203 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 251
>gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143]
Length = 1054
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 788 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 847
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 848 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 907
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGV
Sbjct: 908 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGV 967
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 968 LGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 1008
>gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis]
gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis]
Length = 246
Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 173/234 (73%), Positives = 193/234 (82%), Gaps = 3/234 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQG
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQ 234
VLGIKVKIML +DP K GP PLPD V++ PK+E+ Y P T+ ++P Q
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIPPQ 233
>gi|402221674|gb|EJU01742.1| 40S ribosomal protein S3 [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+T ISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 11 STTISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 70
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRACYG
Sbjct: 71 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYG 130
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MES AKGCEVIVSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQGV
Sbjct: 131 VLRFVMESEAKGCEVIVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGV 190
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM +WDP G+ GP PLPD VTI P ++ +P
Sbjct: 191 LGIKVKIMKAWDPEGRLGPRKPLPDTVTIIEPPIDKLITEP 231
>gi|393232568|gb|EJD40148.1| 40S ribosomal protein S3 [Auricularia delicata TFB-10046 SS5]
Length = 264
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/223 (75%), Positives = 193/223 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT T+ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTREVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELT+++QKRFKFPENS+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRRACY
Sbjct: 61 DKGRRIRELTALIQKRFKFPENSLELYAEKVMHRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++DSAVRHV+L+QG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSRDFVDSAVRHVMLKQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM WDP G+ GP PLPD+VTI P ++ +PT
Sbjct: 181 VLGIKVKIMKGWDPTGETGPKKPLPDMVTIIEPPVDKIIGEPT 223
>gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 1089
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 171/221 (77%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 823 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 882
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYG
Sbjct: 883 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 942
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGV
Sbjct: 943 VLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGV 1002
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 1003 LGIKVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 1043
>gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
gi|347836345|emb|CCD50917.1| similar to 40S ribosomal protein S3 [Botryotinia fuckeliana]
Length = 263
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLL+QGVLGI
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP+ LPD VTI PK+E+ V+P
Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQSVVQP 227
>gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis]
Length = 244
Score = 349 bits (895), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 173/234 (73%), Positives = 193/234 (82%), Gaps = 3/234 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQ 234
VLGIKVKIML +DP K GP PLPD V++ PK+E+ Y P T+ ++P Q
Sbjct: 181 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIPPQ 231
>gi|156051430|ref|XP_001591676.1| 40S ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 263
Score = 348 bits (894), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLL+QGVLGI
Sbjct: 130 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP+ LPD VTI PK+E+ V+P
Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQSVVQP 227
>gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
Length = 266
Score = 348 bits (894), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 169/218 (77%), Positives = 186/218 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLGI
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDEATRHVLLRQGVLGI 187
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP+ LPD VTI PK+E+ V+P
Sbjct: 188 KVKIMRGSDPEGKAGPSKTLPDSVTIIEPKEEQPVVQP 225
>gi|315055209|ref|XP_003176979.1| 40S ribosomal protein S3 [Arthroderma gypseum CBS 118893]
gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
Length = 266
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 185/218 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 226
>gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1]
Length = 255
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/219 (76%), Positives = 186/219 (84%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 2 RISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 61
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 62 RRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVL 121
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLG
Sbjct: 122 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLG 181
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 182 IKVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQAVLQP 220
>gi|340379265|ref|XP_003388147.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 348 bits (893), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/219 (77%), Positives = 185/219 (84%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYGV
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMESGAKGC VIVSGKLR QRAKSMKF DG M+ +G P YID+AV HV LRQGVL
Sbjct: 122 LRFIMESGAKGCTVIVSGKLRGQRAKSMKFTDGLMIHAGNPTRHYIDNAVTHVHLRQGVL 181
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
GIKV+IML DP GK GP PLPD V++ PK+E + +
Sbjct: 182 GIKVQIMLPHDPTGKMGPRKPLPDQVSVAEPKEETHHAE 220
>gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
Length = 266
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 185/218 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPDSVTIIEPKEEQPVLQP 226
>gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
Length = 246
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 171/223 (76%), Positives = 191/223 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATNISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIRELTSVVQKRF F E SVELYAE++ NRGLC+ AQAESL+Y+LL GLAVRRACY
Sbjct: 61 EKGQRIRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
VLRF+ME+GAKGCEVIVSGKLRAQRAKSMKFK+GYMV +G EY+D+AVRHVL+RQG
Sbjct: 121 SVLRFVMEAGAKGCEVIVSGKLRAQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLG+KV IML DP GKQGP L D+VTI PK++ V P
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRNLDDVVTILEPKEDIPLVYPA 223
>gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
Length = 266
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 185/218 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPDSVTIIEPKEEQPVLQP 226
>gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi]
gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi]
Length = 246
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 172/232 (74%), Positives = 192/232 (82%), Gaps = 3/232 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQG
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
VLGIKVKIML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
>gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818]
gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 348 bits (892), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 168/218 (77%), Positives = 185/218 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLGI
Sbjct: 129 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPDSVTIIEPKEEQPVLQP 226
>gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis]
gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis]
Length = 246
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/232 (74%), Positives = 192/232 (82%), Gaps = 3/232 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQG
Sbjct: 123 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 182
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
VLGIKVKIML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 183 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
>gi|449017871|dbj|BAM81273.1| 40S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 262
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/224 (76%), Positives = 194/224 (86%), Gaps = 2/224 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+S KRKFVADGVFFAEL+E+LTRELAEDGY+GVEVRVTP E+IIRATRTQ VLGEKG
Sbjct: 7 QVSWKRKFVADGVFFAELSELLTRELAEDGYAGVEVRVTPRGHEVIIRATRTQTVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V+KRF FPEN V L+ E+V NRGLCA+AQAESLRYKLLGGLAVRRA YGVL
Sbjct: 67 RRIRELTALVEKRFGFPENQVSLFVERVPNRGLCAMAQAESLRYKLLGGLAVRRAAYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+MESGAKGCEV +SGKLRAQRAK+MKF DGYM+S+GQP ++ID AVRHVLLRQGVLG
Sbjct: 127 RFVMESGAKGCEVQISGKLRAQRAKTMKFMDGYMISTGQPKLDFIDRAVRHVLLRQGVLG 186
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
IKVKIML DP G+QGP PLPD + I PK+E+ K +VAT
Sbjct: 187 IKVKIMLPHDPTGRQGPRKPLPDSIVILEPKEEDTLGK--VVAT 228
>gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni]
gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni]
Length = 244
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/232 (74%), Positives = 192/232 (82%), Gaps = 3/232 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLTISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACY
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
VLGIKVKIML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 181 VLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 229
>gi|359492651|ref|XP_003634450.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-1-like
[Vitis vinifera]
Length = 246
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 174/218 (79%), Positives = 189/218 (86%), Gaps = 6/218 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M TQ+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTPM TEIIIRAT+T NVLG
Sbjct: 1 MVTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG++I+ELTSVVQKRF+F ENSVEL AEKVNNRG AIAQAESLRYKLLGG CY
Sbjct: 61 EKGKKIKELTSVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLGG-----XCY 115
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKL AQRAKSMKFKDGY++SSGQPV +YID AVRHV LRQG
Sbjct: 116 GVLRFVMESGAKGCEVIVSGKLCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHV-LRQG 174
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
VLGIKVKIM +WDP GKQ TTPLPDLVTIH K +++
Sbjct: 175 VLGIKVKIMFNWDPKGKQSLTTPLPDLVTIHPNKQDQQ 212
>gi|343429784|emb|CBQ73356.1| probable 40S ribosomal protein S3 [Sporisorium reilianum SRZ2]
Length = 252
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+M+ SGQPV +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGV 182
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM WDP G+ G PLPD VTI PK+E + P
Sbjct: 183 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAP 223
>gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 262
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/223 (75%), Positives = 189/223 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM WDP G+ GP PLPD V I P ++ +PT
Sbjct: 181 VLGIKVKIMKGWDPEGQVGPRKPLPDSVQILEPPLDKIVAEPT 223
>gi|390604317|gb|EIN13708.1| ribosomal protein S3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 265
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/223 (75%), Positives = 190/223 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENSVELYAEKV RGL AIAQ ESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSVELYAEKVTYRGLSAIAQCESLRYKLLGGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLL+QG
Sbjct: 121 GVLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFVDYAVRHVLLKQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM WDP G+ GP+ PLPD V I P ++ +P+
Sbjct: 181 VLGIKVKIMKGWDPQGETGPSKPLPDSVQILEPPVDKIITEPS 223
>gi|443898722|dbj|GAC76056.1| phosphatidylserine decarboxylase [Pseudozyma antarctica T-34]
Length = 252
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 166/221 (75%), Positives = 188/221 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF DG+M+ SGQPV +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPVKDFVDEAVRHVLMKQGV 182
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM WDP G+ G PLPD VTI PK+E + P
Sbjct: 183 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPILAP 223
>gi|170095049|ref|XP_001878745.1| 40S ribosomal protein S3 [Laccaria bicolor S238N-H82]
gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 169/213 (79%), Positives = 185/213 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
VLGIKVKIM DP+G+ GP PLPD V I P
Sbjct: 181 VLGIKVKIMKGSDPDGQTGPRKPLPDSVQILEP 213
>gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae]
gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis]
gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae]
gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis]
Length = 246
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 171/228 (75%), Positives = 191/228 (83%), Gaps = 3/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVKIML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 187 KVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
>gi|392588527|gb|EIW77859.1| 40S ribosomal protein S3 [Coniophora puteana RWD-64-598 SS2]
Length = 267
Score = 346 bits (888), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 167/223 (74%), Positives = 190/223 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE REL+E+GYSG +VRVT RTEIIIRA+ TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFARELSEEGYSGCDVRVTHARTEIIIRASMTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPEN++ELYAEKV +RGL A+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENALELYAEKVQHRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
G+LRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQG
Sbjct: 121 GILRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSKDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM WDP G GP PLPD V I P ++ ++P+
Sbjct: 181 VLGIKVKIMKGWDPEGVLGPRKPLPDSVQILEPPVDKVVLEPS 223
>gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 170/213 (79%), Positives = 184/213 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALEFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
VLGIKVKIM +D G+ GP PLPD V I P
Sbjct: 181 VLGIKVKIMKGYDREGQLGPRKPLPDSVQIFEP 213
>gi|348670844|gb|EGZ10665.1| hypothetical protein PHYSODRAFT_287105 [Phytophthora sojae]
Length = 249
Score = 346 bits (887), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/225 (75%), Positives = 192/225 (85%), Gaps = 2/225 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRRACY
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
V+RF+ME+GAKG +VIVSGKLRAQRAK+MKF +GYMV +G EY+D+AVRHVL+RQG
Sbjct: 121 SVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE--EEYVKPT 223
VLG+KV IML DP GKQGP L D+VTI PK+E YV+PT
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEVYRPYVEPT 225
>gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
Length = 246
Score = 345 bits (886), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 169/225 (75%), Positives = 192/225 (85%), Gaps = 2/225 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTPMRTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRRACY
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
V+RF+ME+GAKG +VIVSGKLRAQRAK+MKF +GYMV +G EY+D+AVRHVL+RQG
Sbjct: 121 SVVRFVMEAGAKGVQVIVSGKLRAQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE--EEYVKPT 223
VLG+KV IML DP GKQGP L D+VTI PK+E YV+PT
Sbjct: 181 VLGVKVSIMLPHDPTGKQGPKRALDDVVTILEPKEEVHRPYVEPT 225
>gi|349803955|gb|AEQ17450.1| putative ribosomal protein s3 [Hymenochirus curtipes]
Length = 235
Score = 345 bits (886), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 183/216 (84%), Gaps = 11/216 (5%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ LAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQ-----------LAVRRACY 109
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAK+MKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 110 GVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 169
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 170 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 205
>gi|392571524|gb|EIW64696.1| 40S ribosomal protein S3 [Trametes versicolor FP-101664 SS1]
Length = 261
Score = 345 bits (885), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 168/223 (75%), Positives = 189/223 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFP+NS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPDNSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM WDP G+ GP PLPD V I P ++ +PT
Sbjct: 181 VLGIKVKIMKGWDPEGQLGPRKPLPDSVQILEPPLDKIVAEPT 223
>gi|353240330|emb|CCA72204.1| probable 40S ribosomal protein S3 [Piriformospora indica DSM 11827]
Length = 268
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/223 (74%), Positives = 188/223 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AEL E RELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELGEFFMRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS+VQKRFKFPE S+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRRA Y
Sbjct: 61 EKGRRIRELTSLVQKRFKFPEGSLELYAEKVLHRGLSAVAQCESLRYKLLGGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MES AKGCEV++SGKLRA RAKSMKF +G+M+ SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESNAKGCEVVISGKLRAARAKSMKFTEGFMIHSGQPARDFVDEAVRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM WDPNG+ GP PLPD+V I P ++ + +PT
Sbjct: 181 VLGIKVKIMKGWDPNGETGPRKPLPDMVQITEPGIDKVFAEPT 223
>gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia]
gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans]
gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia]
gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans]
Length = 246
Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 192/228 (84%), Gaps = 3/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV +RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVASRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
>gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba]
gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba]
Length = 246
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 191/228 (83%), Gaps = 3/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
>gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina
98AG31]
Length = 269
Score = 344 bits (883), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 188/222 (84%), Gaps = 1/222 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TREL+E+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFYAELSEFFTRELSEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQGVL
Sbjct: 122 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPCVDFVDQAVRHVLLRQGVL 181
Query: 183 GIKVKIMLSWDPNGKQG-PTTPLPDLVTIHSPKDEEEYVKPT 223
GIKVKIM D G+ G P PLPDLVT+ PK+E +PT
Sbjct: 182 GIKVKIMRGSDTEGRNGAPAKPLPDLVTVFDPKEEVIVQQPT 223
>gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster]
gi|548856|sp|Q06559.1|RS3_DROME RecName: Full=40S ribosomal protein S3
gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila
melanogaster]
gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster]
gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster]
gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct]
gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct]
gi|346426335|gb|AEO27696.1| RpS3-PA [Drosophila melanogaster]
Length = 246
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 191/228 (83%), Gaps = 3/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPE---TEYKIP 231
>gi|403415257|emb|CCM01957.1| predicted protein [Fibroporia radiculosa]
Length = 260
Score = 343 bits (881), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 167/223 (74%), Positives = 189/223 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MTSQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV +RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQSRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MES AKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHV+LRQG
Sbjct: 121 GVLRFVMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFVDYAVRHVMLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLGIKVKIM DP+G+ GP PLPD V I P ++ +PT
Sbjct: 181 VLGIKVKIMKGTDPDGQSGPRKPLPDSVQILEPPLDKIVAEPT 223
>gi|357016985|gb|AET50521.1| hypothetical protein [Eimeria tenella]
Length = 233
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 164/214 (76%), Positives = 187/214 (87%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE L+R LAEDGYSGVEVRVTP+RTEIIIRATRT+ VLGEK
Sbjct: 5 TNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRF FP +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 65 GRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEV+VSGKLRAQRAKSMKF+DGY++S+G+P ++ A+R V LRQGVL
Sbjct: 125 LRHIMESGAKGCEVVVSGKLRAQRAKSMKFRDGYIISTGEPRQRFVSQAIRSVQLRQGVL 184
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
G++V IML +DP GK GP+TPLPD + + PK E
Sbjct: 185 GVRVSIMLPFDPEGKMGPSTPLPDTIIVSEPKPE 218
>gi|388507388|gb|AFK41760.1| unknown [Lotus japonicus]
Length = 258
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 192/216 (88%), Gaps = 1/216 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
AT ISKKRK +ADGVF+AELNE+LTREL E+GYSGVEVRVTP+RTEIIIRATRTQNVLGE
Sbjct: 3 ATNISKKRKIIADGVFYAELNELLTRELGEEGYSGVEVRVTPLRTEIIIRATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS+VQKRF FPE +VELYAE+V+NR L AIAQAESLR+KLLGGLAVRRACYG
Sbjct: 63 KGRRIRELTSLVQKRFNFPEGNVELYAERVSNRALSAIAQAESLRFKLLGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLR+IME+GAKG E+++SGKLRA RAK+MKF+DGYM+ SG VN Y+D AV+H+ L+QGV
Sbjct: 123 VLRYIMENGAKGVEIVISGKLRAARAKAMKFRDGYMIKSGDAVNHYVDYAVKHIQLKQGV 182
Query: 182 LGIKVKIMLSWDPNGKQGPTT-PLPDLVTIHSPKDE 216
LGIKVKIM+ +DP GK+G +T D+VT+ PK+E
Sbjct: 183 LGIKVKIMMPYDPTGKEGGSTVKQSDVVTVTEPKEE 218
>gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 222
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 163/212 (76%), Positives = 190/212 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+
Sbjct: 1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQ 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FP+++VELYAE+V RGLCA QAESL+YKLLGGLAVRRACYGVLR
Sbjct: 61 RIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKG EVIV+GKLRAQRAK+MKF+DGYM+ SG+ +Y+D AVRHV++RQGVLG+
Sbjct: 121 FIMESGAKGAEVIVAGKLRAQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGV 180
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
V IML DP GK+GP TPL D++TI PK+E
Sbjct: 181 TVSIMLPHDPTGKEGPKTPLSDVITILPPKEE 212
>gi|403173943|ref|XP_003332971.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170763|gb|EFP88552.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 169/215 (78%), Positives = 185/215 (86%), Gaps = 1/215 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVFFAEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFFAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQGVL
Sbjct: 122 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVL 181
Query: 183 GIKVKIMLSWDPNGKQG-PTTPLPDLVTIHSPKDE 216
GIKVKIM D G+ G P PLPD+VTI PK+E
Sbjct: 182 GIKVKIMRGNDTEGRGGAPPKPLPDMVTIFEPKEE 216
>gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta]
gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta]
Length = 246
Score = 343 bits (880), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 168/228 (73%), Positives = 191/228 (83%), Gaps = 3/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RG+CAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGICAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
>gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster]
Length = 253
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 169/228 (74%), Positives = 191/228 (83%), Gaps = 3/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 14 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 74 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 133
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 134 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 193
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 194 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPE---TEYKIP 238
>gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus]
Length = 223
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 172/206 (83%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPD 206
VLGIKVKI++ +P + PTTP+ +
Sbjct: 181 VLGIKVKIII-VEPKDEILPTTPISE 205
>gi|414887550|tpg|DAA63564.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 198
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 167/175 (95%), Positives = 170/175 (97%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
F+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSG PVN YIDSAVRHVLLRQ
Sbjct: 127 FVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQ 181
>gi|384483178|gb|EIE75358.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 231
Score = 342 bits (876), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 162/212 (76%), Positives = 184/212 (86%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGEKGRRIRELT+
Sbjct: 4 VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGEKGRRIRELTT 63
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRRACYGV+RF+MESGA
Sbjct: 64 LVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACYGVIRFVMESGA 123
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
KGCEV+VSGK+RA RAK+MKF DG+M+ SG P E+I +AVRHV LRQGVLGIKVKIML
Sbjct: 124 KGCEVVVSGKVRAARAKAMKFADGFMIHSGNPAREFITTAVRHVDLRQGVLGIKVKIMLD 183
Query: 192 WDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
DP G+ GP LPD+VTI PKDE +P+
Sbjct: 184 NDPTGRNGPKQTLPDIVTILEPKDEAPITEPS 215
>gi|403178905|ref|XP_003337266.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164530|gb|EFP92847.2| small subunit ribosomal protein S3e [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 341
Score = 342 bits (876), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/215 (78%), Positives = 185/215 (86%), Gaps = 1/215 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 78 TTISKRRKFVADGVFYAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 137
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRRACYGV
Sbjct: 138 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 197
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRFIMES AKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQGVL
Sbjct: 198 LRFIMESNAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVL 257
Query: 183 GIKVKIMLSWDPNGKQG-PTTPLPDLVTIHSPKDE 216
GIKVKIM D G+ G P PLPD+VTI PK+E
Sbjct: 258 GIKVKIMRGNDTEGRGGAPPKPLPDMVTIFEPKEE 292
>gi|354473311|ref|XP_003498879.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 240
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 173/216 (80%), Positives = 183/216 (84%), Gaps = 3/216 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRE D Y GVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRE---DSYLGVEVRVTPTRTEIIILATRTQNVLG 57
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG RIRELT+VVQKRF FPE SVELYAEKV R LCAIAQAESLRYKLLGGLAVR ACY
Sbjct: 58 EKGPRIRELTAVVQKRFGFPEGSVELYAEKVATRRLCAIAQAESLRYKLLGGLAVRSACY 117
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR+VLLRQ
Sbjct: 118 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRYVLLRQA 177
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML W+ +GK P PLPD V+I PKDE
Sbjct: 178 VLGIKVKIMLPWETSGKISPQKPLPDHVSIVEPKDE 213
>gi|409083492|gb|EKM83849.1| hypothetical protein AGABI1DRAFT_32206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 673
Score = 341 bits (875), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/217 (76%), Positives = 186/217 (85%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLGEKGRRI
Sbjct: 415 KKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRI 474
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACYGVLRF+
Sbjct: 475 RELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFV 534
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV E++D AVRHVLL+QGVLGIKV
Sbjct: 535 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVREFVDYAVRHVLLKQGVLGIKV 594
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
KIM DP G+ GP PLPD V I+ P ++ ++P+
Sbjct: 595 KIMKGHDPEGQLGPKKPLPDAVQIYEPPVDKVVLEPS 631
>gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102]
Length = 255
Score = 340 bits (872), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 163/211 (77%), Positives = 182/211 (86%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE+GRRIRELTS
Sbjct: 13 VADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRRIRELTS 72
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIMESGA
Sbjct: 73 LIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESGA 132
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
KGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+ID+A RHVLLRQGVLGIKVKIM
Sbjct: 133 KGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGIKVKIMRG 192
Query: 192 WDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
DP+GK GP+ LPD VTI PK+E+ ++P
Sbjct: 193 SDPDGKAGPSKSLPDAVTIFEPKEEQVVLQP 223
>gi|336370495|gb|EGN98835.1| hypothetical protein SERLA73DRAFT_181508 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383275|gb|EGO24424.1| hypothetical protein SERLADRAFT_467690 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 340 bits (871), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 168/213 (78%), Positives = 180/213 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAHISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQFRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
VLGIKVKIM D G GP PLPD V I P
Sbjct: 181 VLGIKVKIMKGSDSEGLVGPRKPLPDSVQIIEP 213
>gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 159/213 (74%), Positives = 189/213 (88%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQG+LG
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
I+VKIM+++DP GK GP T LPD +TIH PK++
Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKED 221
>gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66]
gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66]
Length = 221
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 190/216 (87%), Gaps = 1/216 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MA Q ISKKRKFV DGVF AELNE L+ LAEDGY+GVEVRVTP+RTEIIIRATRT+ VL
Sbjct: 1 MAPQVISKKRKFVNDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIRTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS+VQKRF FP SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLVQKRFNFPAGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYM+++GQP +Y+D AVR+VL++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDYVDKAVRNVLMKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
GVLG++VKIML +DP GK GP+ PLPD + + PK+
Sbjct: 181 GVLGVQVKIMLPYDPEGKVGPSNPLPDAIMVREPKE 216
>gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 339 bits (870), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 159/213 (74%), Positives = 189/213 (88%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQG+LG
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
I+VKIM+++DP GK GP T LPD +TIH PK++
Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKED 221
>gi|405973234|gb|EKC37958.1| 40S ribosomal protein S3 [Crassostrea gigas]
Length = 237
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/212 (79%), Positives = 179/212 (84%), Gaps = 8/212 (3%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 17 FVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 76
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
SVVQKRF FPE +VE RGLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESG
Sbjct: 77 SVVQKRFNFPEGTVE--------RGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 128
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
AKGCEV+VSGKLR QRAKSMKF DG M+ SG P+N+Y+D+AVRHVLLRQGVLGIKVKIML
Sbjct: 129 AKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKVKIML 188
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
WDP+GK GP PLPD V++ PKDE P
Sbjct: 189 PWDPSGKIGPKRPLPDHVSVVEPKDEAVPAHP 220
>gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-]
gi|6094179|sp|O60128.1|RS3_SCHPO RecName: Full=40S ribosomal protein S3
gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 (predicted) [Schizosaccharomyces pombe]
gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe]
Length = 249
Score = 339 bits (869), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 168/235 (71%), Positives = 192/235 (81%), Gaps = 6/235 (2%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 64 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGV
Sbjct: 124 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGV 183
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA 236
LG+KVKIML P K LPD+V + PK+EE KP V I P++ A
Sbjct: 184 LGVKVKIML---PEPKTRQKKSLPDIVVVLDPKEEEPITKPYTV---INQPVEAA 232
>gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 264
Score = 339 bits (869), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 166/218 (76%), Positives = 182/218 (83%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+I T TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDI--STTHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 66 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+IDSA RHVLLRQGVLGI
Sbjct: 126 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 186 KVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 223
>gi|401881615|gb|EJT45911.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 2479]
gi|406702723|gb|EKD05674.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 8904]
Length = 248
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 185/218 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+A Q+SKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 3 VAHQVSKKRKFVADGVFQAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+GRRIREL ++V+KRF+FPENS+ELYAEKV RGL A+AQAESLRYKLLGGLA+RRACY
Sbjct: 63 HQGRRIRELKALVEKRFRFPENSLELYAEKVQYRGLSAVAQAESLRYKLLGGLAMRRACY 122
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLR++MESGAKGCEV+VSGKLRA RAKSMKF DG+++ SGQP ++ID AVRHVLLRQG
Sbjct: 123 GVLRYVMESGAKGCEVVVSGKLRAARAKSMKFSDGFLIHSGQPSVDFIDYAVRHVLLRQG 182
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
VLGIKVKIM DP G+ GP PLPD VT+ PK E E
Sbjct: 183 VLGIKVKIMRPHDPEGRMGPAHPLPDQVTLIEPKPETE 220
>gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum]
gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum]
Length = 245
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 162/222 (72%), Positives = 185/222 (83%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A S K++FV+DG+ AELNE LTRELAEDGYSGV+VR P RTEI+I ATRTQNVLG+
Sbjct: 3 AKTTSVKKRFVSDGMLRAELNEFLTRELAEDGYSGVDVRAAPSRTEIVISATRTQNVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELTS++QKRF F + +VEL+AEKV RGLCA+AQAESLRYKL+GGLAVRRACYG
Sbjct: 63 KGRRIRELTSLIQKRFDFKDKAVELFAEKVAQRGLCAVAQAESLRYKLIGGLAVRRACYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y++ A RHVLLRQGV
Sbjct: 123 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNVATRHVLLRQGV 182
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
LGIKVKIML WD GK GP PLPD V++ PK+E + PT
Sbjct: 183 LGIKVKIMLPWDQTGKLGPKKPLPDNVSVAEPKEEILPIAPT 224
>gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502]
gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis]
Length = 221
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 191/216 (88%), Gaps = 1/216 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYM+++GQP +++D AVR+V+++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
GVLG++VKIML +DP GK GP+ PLPD V + PK+
Sbjct: 181 GVLGVQVKIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
>gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum]
Length = 221
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 160/216 (74%), Positives = 191/216 (88%), Gaps = 1/216 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRRAC
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLR +MESGAKGCEVIVSGKLRAQRAKSMKF+DGYM+++GQP +++D AVR+V+++Q
Sbjct: 121 YGVLRHVMESGAKGCEVIVSGKLRAQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
GVLG++VKIML +DP GK GP+ PLPD V + PK+
Sbjct: 181 GVLGVQVKIMLPYDPEGKTGPSKPLPDAVMVREPKE 216
>gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 164/230 (71%), Positives = 189/230 (82%), Gaps = 2/230 (0%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNV 58
MAT +SKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANVSKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV +RGLCAIAQAESLRYKL+GG VRRA
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVSRGLCAIAQAESLRYKLMGGFPVRRA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLR 178
CYGVLRFIM+SGA+GCE++VSGKLR QRAK+MKF DG M+ SG PVN+Y+ AVRHVLLR
Sbjct: 121 CYGVLRFIMDSGAQGCEIVVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQFAVRHVLLR 180
Query: 179 QGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
QGVLGIKVKIML DP +G PLPD + I PKDE +P + D
Sbjct: 181 QGVLGIKVKIMLPHDPKEGKGVKKPLPDHIQIVQPKDETAITQPYSESKD 230
>gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum]
Length = 249
Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/221 (75%), Positives = 181/221 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A QI+KKRK V DGVF AELN L +ELAEDGYSGVEVR TP R E+II ATRTQ+VLGE
Sbjct: 4 AQQITKKRKAVQDGVFKAELNNFLMKELAEDGYSGVEVRRTPARAEVIIMATRTQSVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GRRIRELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYG
Sbjct: 64 RGRRIRELTSVVQKRFGFAEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMES A+GCEVIVSGKLR QRAKSMKF DG M+ SGQPVN+YI AVRHV LRQGV
Sbjct: 124 VLRFIMESSAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGV 183
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIML DP G+ GP LPD + I P D +P
Sbjct: 184 LGIKVKIMLPHDPKGQMGPRGALPDQIHIQEPNDAPNPTQP 224
>gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 337 bits (863), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/229 (73%), Positives = 191/229 (83%), Gaps = 2/229 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKR+FVADGVF +ELNE L R L E GY+GVEVR TP RTEIII ATRTQ VLGEKG
Sbjct: 5 QMSKKRQFVADGVFKSELNEFLQRSLGEQGYAGVEVRKTPNRTEIIILATRTQEVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT +V+KRF F +N VEL+AEKV NRGLCA+AQ ESLRYKLLGGLAVRRACYGVL
Sbjct: 65 RRIRELTGLVKKRFGFKDN-VELFAEKVANRGLCAMAQCESLRYKLLGGLAVRRACYGVL 123
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
R +MESGAKGCEVI+SGKLRAQRAKSMKF DG+M+S+G P +YID+AVRHVLLRQGVLG
Sbjct: 124 RLVMESGAKGCEVIISGKLRAQRAKSMKFNDGFMISAGHPTRDYIDTAVRHVLLRQGVLG 183
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
IKVKIM +DP G+ GP+T LPD + I PK+E+ KP + D EVP
Sbjct: 184 IKVKIMRPYDPTGRNGPSTVLPDTLEIREPKEEDVPEKPYVQRLD-EVP 231
>gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster]
Length = 246
Score = 336 bits (861), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 166/228 (72%), Positives = 188/228 (82%), Gaps = 3/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP TEIII AT+TQ VL EKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL G LAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
KVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPE---TEYKIP 231
>gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 215
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 162/209 (77%), Positives = 180/209 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGI
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
KVK+ML +DP K GP P+PD V++ P
Sbjct: 187 KVKVMLPYDPKNKIGPKKPVPDNVSVVEP 215
>gi|401408051|ref|XP_003883474.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
Length = 235
Score = 335 bits (860), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 163/216 (75%), Positives = 186/216 (86%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVLR I
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRAQRAKSMKFKDGY++S+G+P ++D A+R V LRQGVLG++V
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KIML DP GK+GP TPLPD + + PK E V+P
Sbjct: 189 KIMLPHDPEGKRGPATPLPDTIIVMDPKPEIPVVQP 224
>gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/214 (75%), Positives = 183/214 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+++S KR+FVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNVLGEK
Sbjct: 7 SKMSIKRRFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNVLGEK 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRRACYGV
Sbjct: 67 GQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGV 126
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
+RF+ME+ AKGCEVIVSGKLR QRAK MKF DGYM+ +G Y D AVRHVL+RQGV+
Sbjct: 127 VRFVMEASAKGCEVIVSGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVLMRQGVI 186
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GIKV IML DP G QGP PL D+VTI PK+E
Sbjct: 187 GIKVAIMLPHDPKGVQGPKIPLDDVVTILEPKEE 220
>gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1]
Length = 252
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/223 (72%), Positives = 190/223 (85%), Gaps = 2/223 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF AELNE+ RELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKG
Sbjct: 5 QMSKKRKFVADGVFKAELNELFMRELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT+ +QKRF F ++ VEL+AEKV NRGLCA+AQ E+LRYKL GGLAVRRACYGV+
Sbjct: 65 RRIRELTAFIQKRFGFQKDEVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVV 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+MESGAKGCEVIVSGKLRAQRAK+MKF DG+M+SSG P EYID+AVRHV +RQG++G
Sbjct: 125 RFVMESGAKGCEVIVSGKLRAQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIG 184
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE--EYVKPTL 224
IKVKIML DP+GK GP PLPD +TI K+E+ + KP L
Sbjct: 185 IKVKIMLPHDPSGKTGPKAPLPDAITILEAKEEDIPDEPKPNL 227
>gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara]
gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata]
Length = 216
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/210 (76%), Positives = 185/210 (88%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TP+RTEIIIRATRT+ VLGEK RR
Sbjct: 7 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 66
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RRA YGVLR
Sbjct: 67 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 126
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY++S+GQP EY+++AVR V LRQGVLGIK
Sbjct: 127 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIK 186
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
VKIML +DP G+ GP+T LPD VT+ PK
Sbjct: 187 VKIMLPYDPEGRLGPSTLLPDTVTVLDPKS 216
>gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga]
gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva]
Length = 216
Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 161/209 (77%), Positives = 185/209 (88%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TP+RTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY++S+GQP EY+++AVR V LRQGVLGIK
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIK 187
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
VKIML +DP G+ GP+T LPD VT+ PK
Sbjct: 188 VKIMLPYDPEGRLGPSTLLPDTVTVLDPK 216
>gi|403223989|dbj|BAM42119.1| 40S ribosomal protein S3 [Theileria orientalis strain Shintoku]
Length = 216
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/209 (77%), Positives = 185/209 (88%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TP+RTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY++S+GQP +Y+++AVR V LRQGVLGIK
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQQYVNTAVRSVQLRQGVLGIK 187
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
VKIML +DP G+ GP+T LPD VT+ PK
Sbjct: 188 VKIMLPYDPEGRIGPSTLLPDTVTVLDPK 216
>gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1]
Length = 255
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 186/219 (84%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KG
Sbjct: 26 QTCKKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKG 85
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVL
Sbjct: 86 RRIRELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 145
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
R IMESGAKGCEV+VSGKLRAQRAKSMKFKDGY++S+G+P ++D A+R V LRQGVLG
Sbjct: 146 RHIMESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLG 205
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
++VKIML DP GK+GP PLPD + + PK E V+P
Sbjct: 206 VRVKIMLPHDPEGKRGPANPLPDTIIVMDPKPEIPVVQP 244
>gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG]
Length = 235
Score = 333 bits (855), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 185/216 (85%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGVLR I
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRAQRAKSMKFKDGY++S+G+P ++D A+R V LRQGVLG++V
Sbjct: 129 MESGAKGCEVVVSGKLRAQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRV 188
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KIML DP GK+GP PLPD + + PK E V+P
Sbjct: 189 KIMLPHDPEGKRGPANPLPDTIIVMDPKPEIPVVQP 224
>gi|430813642|emb|CCJ29017.1| unnamed protein product [Pneumocystis jirovecii]
Length = 412
Score = 333 bits (854), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 165/223 (73%), Positives = 183/223 (82%), Gaps = 5/223 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+A IS FVADGVFFAELNE TREL+ +GYSG EVRVTP RTEIIIRAT TQ+VLG
Sbjct: 165 LANLISLFAMFVADGVFFAELNEFFTRELSAEGYSGTEVRVTPSRTEIIIRATHTQDVLG 224
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTS++QKRFKFPE SVELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA Y
Sbjct: 225 EKGRRIRELTSLIQKRFKFPEGSVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAY 284
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV++SGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQG
Sbjct: 285 GVLRFIMESGAKGCEVVISGKLRAARAKSMKFTDGFMIHSGQPSRDFIDSATRHVLLRQG 344
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VLG+KVKIMLS K PLPD V + PK EE+ +P+
Sbjct: 345 VLGVKVKIMLSESMTRK-----PLPDSVVVIEPKPEEQIGQPS 382
>gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106179|ref|XP_778100.1| 40S ribosomal protein S3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276]
gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276]
gi|405117477|gb|AFR92252.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii H99]
Length = 252
Score = 332 bits (851), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 162/212 (76%), Positives = 181/212 (85%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF AELN+ TRELAE+GY+G EVRVT RTEIIIRAT TQ VLG+KGR
Sbjct: 7 ISKRRKFVADGVFQAELNDFFTRELAEEGYAGCEVRVTHARTEIIIRATHTQEVLGDKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIREL ++++KRFKFPEN++ELYAEKV RGL A AQAESLRYKLLGGLA+RRACYGVLR
Sbjct: 67 RIRELKALIEKRFKFPENALELYAEKVQYRGLSATAQAESLRYKLLGGLAMRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGAKGCEV+VSGKLRA RAKSMKF +G+MV SGQP ++ID AVRHVLLRQGVLGI
Sbjct: 127 FVMESGAKGCEVVVSGKLRAARAKSMKFTEGFMVHSGQPARDFIDYAVRHVLLRQGVLGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KVKIM DP G+QGP LPD V I PK E
Sbjct: 187 KVKIMKPSDPAGRQGPAKNLPDDVQITEPKAE 218
>gi|346466617|gb|AEO33153.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/198 (82%), Positives = 175/198 (88%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLGEKGRRIRELTSVVQKRF
Sbjct: 31 AELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLGEKGRRIRELTSVVQKRFN 90
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+V
Sbjct: 91 FPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVV 150
Query: 139 SGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQ 198
SGKLR QRAKSMKF DG M+ SG+P N+Y+++AVRHVLLRQGVLGIKVKIML DPNGK
Sbjct: 151 SGKLRGQRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLPCDPNGKL 210
Query: 199 GPTTPLPDLVTIHSPKDE 216
GP PLPD V+I PK E
Sbjct: 211 GPKKPLPDHVSIMEPKKE 228
>gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga]
Length = 215
Score = 332 bits (851), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 163/215 (75%), Positives = 182/215 (84%), Gaps = 2/215 (0%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNV 58
MAT ISKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANISKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV RGLCAIAQAESLRYKL+GGL VRRA
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVTRGLCAIAQAESLRYKLMGGLPVRRA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLR 178
CYGVLRFIMESGA+GCE+IVSGKLR QRAK+MKF DG M+ SG PVN+Y+ AVRHVLLR
Sbjct: 121 CYGVLRFIMESGAQGCEIIVSGKLRGQRAKAMKFIDGLMIHSGDPVNDYVQYAVRHVLLR 180
Query: 179 QGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
QGVLGIKVKIML DP +G PLPD + I P
Sbjct: 181 QGVLGIKVKIMLPHDPKEGKGVKKPLPDHIQIVQP 215
>gi|392572589|gb|EIW65734.1| hypothetical protein TREMEDRAFT_41205 [Tremella mesenterica DSM
1558]
Length = 249
Score = 332 bits (850), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 162/215 (75%), Positives = 179/215 (83%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ QISKKRKF+ADGVF AEL E T ELA++GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 4 SAQISKKRKFIADGVFQAELGEFFTHELADEGYSGCEVRVTHARTEIIIRATHTQEVLGA 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
GRRIREL S+V KRFKFPENS+ELYAE+V RGL A+AQAESLRYKLLGGLA+RRACYG
Sbjct: 64 NGRRIRELRSLVMKRFKFPENSLELYAERVQYRGLSAVAQAESLRYKLLGGLAMRRACYG 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV+VSGKLRA RAKSMKF DG M+ SGQP +Y+D AVRHVLLRQGV
Sbjct: 124 VLRFVMESGAKGCEVVVSGKLRAARAKSMKFVDGLMIHSGQPAKDYVDYAVRHVLLRQGV 183
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
LGIKVKIM +DP G+ GP LPD VT+ PK E
Sbjct: 184 LGIKVKIMRPFDPEGRMGPAKNLPDAVTMVDPKPE 218
>gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus]
Length = 189
Score = 331 bits (849), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 164/185 (88%), Positives = 170/185 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 VLGIK 185
VLGIK
Sbjct: 181 VLGIK 185
>gi|393905484|gb|EFO25530.2| 40S ribosomal protein S3 [Loa loa]
Length = 250
Score = 331 bits (848), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 178/219 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG M+ SGQPVN+YI AVRHV LRQGVLG
Sbjct: 127 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 186
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IKVKIML DP G GP LPD + I P + + P
Sbjct: 187 IKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHP 225
>gi|388579652|gb|EIM19973.1| 40S ribosomal protein S3 [Wallemia sebi CBS 633.66]
Length = 244
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 161/214 (75%), Positives = 182/214 (85%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SK RK V DGVF AEL E TREL+E+G+SG EVRVT RTEIIIRAT TQ VLGEKG
Sbjct: 7 QLSKSRKIVQDGVFQAELIEFFTRELSEEGFSGCEVRVTHARTEIIIRATHTQEVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRACYGV+
Sbjct: 67 RRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYGVV 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAK+MKF DG+M+ SGQPV +++D AVRHVLL+QGVLG
Sbjct: 127 RFIMESGAKGCEVVVSGKLRAARAKAMKFTDGFMIHSGQPVRDFVDFAVRHVLLKQGVLG 186
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
+KVKIM DP G+ G PLPD V I PK+E+
Sbjct: 187 LKVKIMRPHDPEGRAGFPKPLPDSVVIVEPKEEQ 220
>gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa]
Length = 249
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 163/219 (74%), Positives = 178/219 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 6 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 66 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG M+ SGQPVN+YI AVRHV LRQGVLG
Sbjct: 126 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IKVKIML DP G GP LPD + I P + + P
Sbjct: 186 IKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHP 224
>gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03]
Length = 261
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 179/218 (82%), Gaps = 9/218 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II LGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDII---------LGEQGR 58
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 59 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQPV ++IDSA RHVLLRQGVLGI
Sbjct: 119 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VTI PK+EE + P
Sbjct: 179 KVKIMRGSDPEGKSGPQKSLPDSVTIIDPKEEEPVLHP 216
>gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
Length = 251
Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/224 (72%), Positives = 184/224 (82%), Gaps = 3/224 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 3 ALTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGV
Sbjct: 123 VLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQGV 182
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLV 225
LG+KVKIML P K LPD V + PK+E +P V
Sbjct: 183 LGVKVKIML---PEPKTRQKKSLPDAVVVLDPKEEAPITEPYTV 223
>gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica]
gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica]
gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica]
gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 329 bits (844), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 183/215 (85%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ ISKKRK VA+GVF AEL+ L +ELAEDGYSGVEVR+TP RTEIII ATRTQNVLG+
Sbjct: 5 SANISKKRKHVAEGVFRAELDGYLRKELAEDGYSGVEVRITPKRTEIIILATRTQNVLGD 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
K +RIRELT++VQKRF+ + +VEL+AEKV NRGLCAIAQ ESLRYKL GGLAVRRA YG
Sbjct: 65 KAKRIRELTALVQKRFQIKDGAVELFAEKVANRGLCAIAQCESLRYKLEGGLAVRRAAYG 124
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV++SGKLR QRAK+MKF DG M+ +G PV EY+D+AVRHV+LRQGV
Sbjct: 125 VLRFIMESGAKGCEVVISGKLRGQRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQGV 184
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
+G+KVK+ML DP GK GP TP PD+V I PK+E
Sbjct: 185 IGLKVKVMLPHDPAGKVGPKTPYPDIVEIREPKEE 219
>gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi]
gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi]
Length = 250
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/219 (73%), Positives = 178/219 (81%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
++SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 EMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMES A+GCEVIVSGKLR QRAKSMKF DG M+ SGQPVN+YI AVRHV LRQGVLG
Sbjct: 127 RFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLG 186
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IKVKIML DP G GP LPD + I P + + P
Sbjct: 187 IKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHP 225
>gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/220 (72%), Positives = 183/220 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S KRKFVADGVF+AELNE+LT ELAE+GY+GVEVR TP RTE+IIRATRTQNVLGE R
Sbjct: 1 MSVKRKFVADGVFYAELNELLTAELAEEGYAGVEVRTTPHRTELIIRATRTQNVLGENNR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL++KLLGGLAVRRACYGV+R
Sbjct: 61 RIRELTSVVQKRFNFADGAVELYAERVQNRGLCAQAQAESLKFKLLGGLAVRRACYGVVR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+ME+ AKGCEV+V+GKLR QRAK MKF DGYM+ +G Y DSAVRHVL+RQGV+GI
Sbjct: 121 FVMEAQAKGCEVVVTGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDSAVRHVLMRQGVIGI 180
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
KV IML DP G+ GP PL D+VTI PK+E V TL
Sbjct: 181 KVSIMLPQDPKGQMGPKIPLDDVVTILEPKEEPNGVAGTL 220
>gi|397567805|gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira oceanica]
Length = 266
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 182/212 (85%), Gaps = 2/212 (0%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNV 58
MAT ++S KRKFVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNV
Sbjct: 2 MATRAKMSTKRKFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNV 61
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRA 118
LGEKG+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRRA
Sbjct: 62 LGEKGQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRA 121
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLR 178
CYGV+RF+ME+ AKGCEVIVSGKLR QRAK+MKF DGYM+ +G Y D+AVRHV +R
Sbjct: 122 CYGVVRFVMEASAKGCEVIVSGKLRGQRAKAMKFGDGYMIKTGHAGQVYTDTAVRHVAMR 181
Query: 179 QGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTI 210
QG++GIKV IML DP G+ GP PL D+VTI
Sbjct: 182 QGMIGIKVSIMLPHDPKGQIGPKIPLDDVVTI 213
>gi|399216964|emb|CCF73651.1| unnamed protein product [Babesia microti strain RI]
Length = 218
Score = 328 bits (841), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/214 (73%), Positives = 183/214 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
QISKK KF+ DG+F AELNE L+R LAEDGYSGVEVR TP++TE+IIRATRT+ VLGEK
Sbjct: 4 AQISKKCKFINDGIFHAELNEFLSRSLAEDGYSGVEVRATPVKTEVIIRATRTREVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRIRELTS+VQKRF F +SVELYAE++ +RGLCA+AQAESLRYKLL GLAVRRA YGV
Sbjct: 64 GRRIRELTSLVQKRFGFAPDSVELYAERIEHRGLCAMAQAESLRYKLLKGLAVRRAAYGV 123
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGA GCE+I+SGKLRAQRAKSMKFKDGY++S+G+P +YI+SA R V LRQGVL
Sbjct: 124 LRHIMESGANGCEIIISGKLRAQRAKSMKFKDGYLISTGEPSKQYINSATRSVQLRQGVL 183
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
G+KVKIML DP GK+GP +PD +T+ PK E
Sbjct: 184 GVKVKIMLPHDPEGKRGPKAIIPDSITVLEPKPE 217
>gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis angaria]
Length = 247
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/232 (69%), Positives = 186/232 (80%), Gaps = 4/232 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++KK+K V +G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 LTKKKKAVQNGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVEL+AEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELFAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVP 232
KVKIML +DP G+ GP LPD V I P DE E + + DI++P
Sbjct: 187 KVKIMLPYDPRGQNGPRNALPDHVQIEDPVDEVLPTEPHSQHKEEKKDIQIP 238
>gi|429329723|gb|AFZ81482.1| 40S ribosomal protein S3, putative [Babesia equi]
Length = 218
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/209 (76%), Positives = 180/209 (86%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
SK++KF+ DGVF AELNE L R LAEDGYSGVE+R+TP+RTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKKFINDGVFNAELNEFLARTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRRA YGVLR
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY++S+GQP Y+ +AVR V LRQGVLGIK
Sbjct: 128 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYIISTGQPAQAYVSTAVRSVQLRQGVLGIK 187
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
VKIM DP+G+ GPT LPD +T+ PK
Sbjct: 188 VKIMHPHDPDGRIGPTMILPDNITVLEPK 216
>gi|428179210|gb|EKX48082.1| small subunit ribosomal protein S3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 249
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 185/219 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGV +AELNE+L ELAEDGYSGVE+R TPMRTEIIIRATRT+ VLGEKG+
Sbjct: 6 ISKKRKFVQDGVLYAELNEMLMHELAEDGYSGVEIRRTPMRTEIIIRATRTREVLGEKGQ 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS VQKRF F E +VE++AE+V+NRGL A+AQAESL++KLLGGL VRRACYGV+R
Sbjct: 66 RIRELTSAVQKRFGFAEGTVEMFAERVHNRGLSAMAQAESLKFKLLGGLQVRRACYGVIR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+MESGA G EVIVSGK R QRAKSMKFK G+++++G+P +ID A RHV+++QGVLGI
Sbjct: 126 FVMESGALGVEVIVSGKARVQRAKSMKFKSGFLITTGRPAQVFIDKATRHVMMKQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
++KIML DP GK GP TP PD VTI PK+++ V PT
Sbjct: 186 RLKIMLPHDPEGKNGPKTPFPDTVTILDPKEDKPPVVPT 224
>gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri]
Length = 220
Score = 327 bits (838), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 177/208 (85%), Gaps = 3/208 (1%)
Query: 22 NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPE 81
+E LTRELAEDGYSGVE+R TP RTEIII ATRTQNVLG+KGRRIRELTSVVQKRFKF +
Sbjct: 1 DEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFKFAD 60
Query: 82 NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGK 141
++ELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGK
Sbjct: 61 GAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 120
Query: 142 LRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPT 201
LR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGIKVKIML WD GK GP
Sbjct: 121 LRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDSTGKTGPK 180
Query: 202 TPLPDLVTIHSPKDEEEYVKPTLVATDI 229
PLPD V + PK+E V PT+ ++ +
Sbjct: 181 KPLPDNVNVLEPKEE---VNPTIPSSQV 205
>gi|341895059|gb|EGT50994.1| CBN-RPS-3 protein [Caenorhabditis brenneri]
Length = 246
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 178/212 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KVKIML +DP G+ GP LPD V I P+DE
Sbjct: 187 KVKIMLPYDPRGQNGPKIALPDHVQILEPQDE 218
>gi|17554770|ref|NP_498349.1| Protein RPS-3 [Caenorhabditis elegans]
gi|1350989|sp|P48152.1|RS3_CAEEL RecName: Full=40S ribosomal protein S3
gi|351050702|emb|CCD65297.1| Protein RPS-3 [Caenorhabditis elegans]
Length = 247
Score = 326 bits (836), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 162/232 (69%), Positives = 186/232 (80%), Gaps = 4/232 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVP 232
KVKIML +DP G+ GP LPD V I P++E E + + D++VP
Sbjct: 187 KVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHKEEKKDVQVP 238
>gi|452988654|gb|EME88409.1| hypothetical protein MYCFIDRAFT_70441 [Pseudocercospora fijiensis
CIRAD86]
Length = 273
Score = 326 bits (836), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 161/223 (72%), Positives = 184/223 (82%), Gaps = 4/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 15 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 74
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 75 RIRELTSLITHRFKFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 134
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLGI
Sbjct: 135 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 194
Query: 185 KVKIMLSW----DPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
KVKIM + DP+G++ LPD VTI PK+E+ + P+
Sbjct: 195 KVKIMRASSSPNDPSGEKAGGKGLPDSVTIIEPKEEQPILAPS 237
>gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae]
Length = 247
Score = 325 bits (834), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 161/232 (69%), Positives = 185/232 (79%), Gaps = 4/232 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVP 232
KVKIML +DP G GP LPD V I P++E E + + D+++P
Sbjct: 187 KVKIMLPYDPRGMNGPRNALPDHVQIMEPQEEVIPKEPHSQHKEEKKDVQIP 238
>gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
Length = 187
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 159/186 (85%), Positives = 169/186 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA +SKK+KFVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 2 MANPVSKKKKFVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACY
Sbjct: 62 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVAQRGLCAIAQCESLRYKLIGGLAVRRACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P+N+Y+D+AVRHVLLRQG
Sbjct: 122 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQG 181
Query: 181 VLGIKV 186
VLGIKV
Sbjct: 182 VLGIKV 187
>gi|453089728|gb|EMF17768.1| ribosomal protein S3 [Mycosphaerella populorum SO2202]
Length = 276
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 160/224 (71%), Positives = 183/224 (81%), Gaps = 4/224 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 14 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 73
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 74 RRIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 133
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLG
Sbjct: 134 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLG 193
Query: 184 IKVKIMLSW----DPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
IKVKIM + DP G++ LPD VTI PK+E+ + P+
Sbjct: 194 IKVKIMRASSSPNDPAGEKAGGKGLPDSVTIIEPKEEQPILAPS 237
>gi|398398591|ref|XP_003852753.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
gi|339472634|gb|EGP87729.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
Length = 265
Score = 323 bits (829), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 160/224 (71%), Positives = 182/224 (81%), Gaps = 4/224 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 5 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 65 RRIRELTSLITHRFKFPADSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLG
Sbjct: 125 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLG 184
Query: 184 IKVKIMLS----WDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
IKVKIM + DP G++ LPD VTI PK+E+ + P+
Sbjct: 185 IKVKIMRASSTPGDPAGEKSGGKGLPDSVTIIEPKEEQPILAPS 228
>gi|410075477|ref|XP_003955321.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
gi|372461903|emb|CCF56186.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
Length = 241
Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 160/225 (71%), Positives = 188/225 (83%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+RF+MESGAKGCEV+VSGKLRA RAKSMKF DG+++ SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRFVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDIATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPN-GKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP+ K GPT LPD V+I PKDEE +PT+
Sbjct: 181 VLGIKVKIM--RDPSRNKVGPTA-LPDAVSIVEPKDEERVTQPTV 222
>gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii]
Length = 188
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/188 (83%), Positives = 167/188 (88%)
Query: 29 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELTSVVQKRF F E +VELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFQEGTVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAK
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAK 120
Query: 149 SMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLV 208
SMKF DG M+ SG P N+Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V
Sbjct: 121 SMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKRPLPDHV 180
Query: 209 TIHSPKDE 216
+I P++E
Sbjct: 181 SIVEPQEE 188
>gi|452848046|gb|EME49978.1| hypothetical protein DOTSEDRAFT_122074 [Dothistroma septosporum
NZE10]
Length = 266
Score = 322 bits (826), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/224 (70%), Positives = 183/224 (81%), Gaps = 4/224 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 5 NISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVL
Sbjct: 65 RRIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVL 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLG
Sbjct: 125 RFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLG 184
Query: 184 IKVKIMLS----WDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
IKVKIM + DP+G++ LPD VTI PK+E+ + P+
Sbjct: 185 IKVKIMRASSSPGDPSGEKAGGKGLPDSVTIIEPKEEQPILAPS 228
>gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus]
Length = 272
Score = 322 bits (826), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 160/218 (73%), Positives = 176/218 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
I+KK+K V DGVF AELN L +ELAEDGY+GVEVR P RTE+II ATRTQNVLGE+GR
Sbjct: 27 ITKKKKAVQDGVFKAELNNFLMKELAEDGYAGVEVRRAPTRTEVIITATRTQNVLGERGR 86
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF F VELYAEKV NRGLCA+AQ ESLR+KL GGLAVRRACYGVLR
Sbjct: 87 RIRELTAVVQKRFGFNVGQVELYAEKVANRGLCAVAQCESLRFKLCGGLAVRRACYGVLR 146
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMES AKGCE+IVSGKLR QRAK+MKF DG M+ SG PVNEY+ AVRHV LRQGVLGI
Sbjct: 147 FIMESQAKGCEIIVSGKLRGQRAKAMKFVDGIMIHSGHPVNEYVQQAVRHVQLRQGVLGI 206
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIML DP GK GP PLPD + I P+ E+ P
Sbjct: 207 KVKIMLPHDPEGKIGPRNPLPDHIQILEPRPEDNPTVP 244
>gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus]
Length = 181
Score = 322 bits (826), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 159/180 (88%), Positives = 165/180 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus]
Length = 206
Score = 322 bits (825), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 164/196 (83%), Positives = 171/196 (87%), Gaps = 1/196 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
Query: 181 V-LGIKVKIMLSWDPN 195
V KVK P+
Sbjct: 181 VAWAFKVKDPCCLGPD 196
>gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 221
Score = 322 bits (824), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/193 (81%), Positives = 166/193 (86%)
Query: 30 AEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAE 89
AEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAE
Sbjct: 1 AEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAE 60
Query: 90 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKS 149
KV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q AKS
Sbjct: 61 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQCAKS 120
Query: 150 MKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVT 209
MKF DG M+ SG P NEY+D+A RHVLLRQGVLGIKVKIML WDPNGK GP PLPD V+
Sbjct: 121 MKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPLPDNVS 180
Query: 210 IHSPKDEEEYVKP 222
+ PKDE Y P
Sbjct: 181 VVEPKDEIMYSTP 193
>gi|406867161|gb|EKD20200.1| ribosomal protein S3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 319
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 173/218 (79%), Gaps = 13/218 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVFFAELNE RELAE+GY IIRAT TQ VLGE+GR
Sbjct: 82 ISKRRKFVADGVFFAELNEFFQRELAEEGY-------------FIIRATHTQEVLGEQGR 128
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 129 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 188
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLGI
Sbjct: 189 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 248
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP GK GP LPD VT+ PK+E+ V+P
Sbjct: 249 KVKIMRGSDPEGKSGPQKTLPDSVTVIEPKEEQSVVQP 286
>gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
Length = 264
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/218 (69%), Positives = 180/218 (82%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVF AELNE TRELA +GYSG VRV +RTEIIIRAT TQ VLG+KGR
Sbjct: 6 ISKKRKFVADGVFTAELNEFFTRELAAEGYSGCLVRVNHVRTEIIIRATHTQEVLGDKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
R+RELT++V++RF+FPE S+ELYAEKV NRGL A+AQ ESLR KLLGGL VRRA YGVLR
Sbjct: 66 RLRELTTLVRQRFRFPEGSLELYAEKVANRGLHAVAQCESLRNKLLGGLPVRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV++SGK+R RAKSMKF DG+M+ +GQP +++D A+RHVL++QGVLG+
Sbjct: 126 YVMESGAKGCEVVISGKVRGARAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQGVLGL 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM WDP G+ G PLPD VTI PK++E P
Sbjct: 186 KVKIMHGWDPEGRSGRPFPLPDAVTILEPKEDEPITAP 223
>gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
Length = 239
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 159/221 (71%), Positives = 178/221 (80%), Gaps = 11/221 (4%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRRA YG
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRF+MESGAKGCEV++SGKLRA RAKSMKF D +++D AVRHVL++QGV
Sbjct: 123 VLRFVMESGAKGCEVVISGKLRAARAKSMKFTD-----------DFVDEAVRHVLMKQGV 171
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIM WDP G+ G PLPD VTI PK+E P
Sbjct: 172 LGIKVKIMQGWDPEGRAGKPFPLPDAVTILEPKEEAPISAP 212
>gi|339240791|ref|XP_003376321.1| 40S ribosomal protein S3-A [Trichinella spiralis]
gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis]
Length = 330
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/218 (73%), Positives = 177/218 (81%), Gaps = 4/218 (1%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
S K+KF+ADGVF AELN RELAEDGYSGVEVR TP +TEIII ATRTQNVLGEKGRR
Sbjct: 100 SIKKKFIADGVFKAELNNFFMRELAEDGYSGVEVRKTPRKTEIIIMATRTQNVLGEKGRR 159
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELTS+VQKRF PE S LYAEKV RGLCAIAQ ESLR+KL+GGL VRRACYG+LR+
Sbjct: 160 IRELTSLVQKRFNLPEES--LYAEKVAQRGLCAIAQCESLRFKLIGGLPVRRACYGILRY 217
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMES AKGCEVIVSGKLR QRAKSMKF DG M+ SG P NEY++ VRHV+LRQGV+GIK
Sbjct: 218 IMESQAKGCEVIVSGKLRGQRAKSMKFVDGLMIHSGDPTNEYVEKGVRHVVLRQGVIGIK 277
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VKIML DP G GP PLPD V + PK+E E KP+
Sbjct: 278 VKIMLPHDPKGVYGPKKPLPDSVVVFEPKEEIE--KPS 313
>gi|449304480|gb|EMD00487.1| hypothetical protein BAUCODRAFT_99745 [Baudoinia compniacensis UAMH
10762]
Length = 282
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 158/222 (71%), Positives = 180/222 (81%), Gaps = 4/222 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 16 VSKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 75
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++ RF+FP SV LYA KV +RGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 76 RIRELTSLITHRFRFPPESVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 135
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++ID A RHVLLRQGVLGI
Sbjct: 136 FIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAVDFIDHATRHVLLRQGVLGI 195
Query: 185 KVKIMLS----WDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM + DP G++ LPD VTI PK+E+ + P
Sbjct: 196 KVKIMRASSSPSDPAGEKAGGKGLPDSVTIIEPKEEQPIMAP 237
>gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius]
Length = 221
Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/219 (71%), Positives = 178/219 (81%), Gaps = 3/219 (1%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
GV AELNE LTRELAE+GYSG+E+R+TP RTEIII AT TQNVLGEKG+RIR LTSV+Q
Sbjct: 1 GVLKAELNEFLTRELAEEGYSGIEMRMTPARTEIIIMATSTQNVLGEKGKRIRALTSVIQ 60
Query: 75 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
KRF+F E ++LY EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIME+GAKGC
Sbjct: 61 KRFQFAEGKLDLYTEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMENGAKGC 120
Query: 135 EVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDP 194
E++VSGKLR QRAKSMKF DG M+ SG P NEY+DSA RHVLLRQGVLG+KVKIML WD
Sbjct: 121 EIVVSGKLRGQRAKSMKFVDGLMIHSGDPCNEYVDSATRHVLLRQGVLGVKVKIMLPWDT 180
Query: 195 NGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
GK G PLPD V + PK+E P +DI+ P+
Sbjct: 181 LGKIGLKKPLPDNVCVCDPKEETVISGPV---SDIKDPL 216
>gi|50291535|ref|XP_448200.1| 40S ribosomal protein S3 [Candida glabrata CBS 138]
gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata]
Length = 247
Score = 320 bits (819), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/224 (68%), Positives = 186/224 (83%), Gaps = 2/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M + ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVSLISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP +G LPD V+I PKDEE + PT+
Sbjct: 181 VLGIKVKIM--RDPATNRGGPRALPDAVSIVEPKDEEPVLTPTV 222
>gi|366995337|ref|XP_003677432.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
gi|342303301|emb|CCC71079.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
Length = 244
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 187/225 (83%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFSDGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP K GP LPD VTI PKDEE + P++
Sbjct: 181 VLGIKVKIM--RDPATAKTGPRA-LPDAVTIVEPKDEEPVLAPSV 222
>gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus]
Length = 201
Score = 319 bits (818), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 158/179 (88%), Positives = 164/179 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
GVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQ
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo]
gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis]
Length = 223
Score = 319 bits (817), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/219 (70%), Positives = 182/219 (83%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T+ S RKF+ DGVF AELNE L+R LAEDGYSGVE+R+TP+RTEIIIRATR + V+GEK
Sbjct: 5 TRKSMCRKFIGDGVFNAELNEFLSRVLAEDGYSGVELRITPVRTEIIIRATRAREVVGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRIRELTS++QKRF F ++VELYAE+V ++GLCA+AQAESLRYKLL GLAVRRA YGV
Sbjct: 65 ARRIRELTSLIQKRFGFSPDTVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY++S+GQP ++ SA R V LRQGVL
Sbjct: 125 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQGVL 184
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
GIKVKIM DP G+ GP+T +PD +T+ P + EY K
Sbjct: 185 GIKVKIMHPHDPEGRLGPSTVMPDTITVKEPSPDMEYSK 223
>gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei]
gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei]
Length = 255
Score = 319 bits (817), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 162/240 (67%), Positives = 186/240 (77%), Gaps = 12/240 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVE--------LYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
RI+ELTSVVQKRF F E SVE LYAEKV+NRGLCA+AQ ESLRYKL+GGLAVR
Sbjct: 67 RIKELTSVVQKRFAFEEGSVEVKFSFRNLLYAEKVSNRGLCAVAQCESLRYKLVGGLAVR 126
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV
Sbjct: 127 RACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQ 186
Query: 177 LRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVP 232
LRQGV+GIKVKIML +DP G+ GP LPD V I P++E E + + D++VP
Sbjct: 187 LRQGVIGIKVKIMLPYDPRGQNGPRIALPDHVQIVEPQEEVIPKEPHSQHKEEKKDVQVP 246
>gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 188/249 (75%), Gaps = 18/249 (7%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGR-----RIRELTSVVQKRFKFPENSVELYAE-KVNNRGLCAIAQAESLRY------- 107
+K + R + ++ + F + + A + + C + E L +
Sbjct: 61 KKDQGADFQWFRRGLNFLKTVWSFMLRKLTIGASVPLLRQSHCDTSFLEDLPFGGKPEIG 120
Query: 108 ----KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQP 163
+ L ACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQP
Sbjct: 121 HYYCHIRSYLKFSLACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 180
Query: 164 VNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
V +YIDSAVRHVLLRQGVLGIKVKIML WDP GKQGPTTPLPDLVTIH PK+EEEYV P
Sbjct: 181 VKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHXPKEEEEYVPPV 240
Query: 224 LVATDIEVP 232
L T+IEVP
Sbjct: 241 L-TTNIEVP 248
>gi|365988130|ref|XP_003670896.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
gi|343769667|emb|CCD25653.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
Length = 243
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 156/225 (69%), Positives = 186/225 (82%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYTPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPV ++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVKDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP K GP LPD VTI PKDEE + P++
Sbjct: 181 VLGIKVKIM--RDPATAKTGPRA-LPDAVTIVEPKDEEPILAPSV 222
>gi|401839576|gb|EJT42741.1| RPS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 186/224 (83%), Gaps = 2/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + LPD VTI PK+EE+ + P++
Sbjct: 181 VLGIKVKIM--RDPAKSRTGPKALPDAVTIIEPKEEEQILAPSV 222
>gi|365758790|gb|EHN00617.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 240
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 186/224 (83%), Gaps = 2/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + LPD VTI PK+EE+ + P++
Sbjct: 181 VLGIKVKIM--RDPAKSRTGPKALPDAVTIIEPKEEEQILTPSV 222
>gi|302306412|ref|NP_982809.2| 40S ribosomal protein S3 [Ashbya gossypii ATCC 10895]
gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895]
gi|374106011|gb|AEY94921.1| FABL138Wp [Ashbya gossypii FDAG1]
Length = 244
Score = 317 bits (811), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 154/224 (68%), Positives = 184/224 (82%), Gaps = 2/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESLR+KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLRFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG+++ SGQPVN++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP+ + LPD V I PKDE+ V+P++
Sbjct: 181 VLGIKVKIM--KDPSKSRTGPKALPDAVKILEPKDEDAVVEPSV 222
>gi|401623905|gb|EJS41984.1| rps3p [Saccharomyces arboricola H-6]
Length = 240
Score = 316 bits (809), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 154/225 (68%), Positives = 187/225 (83%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + GP LPD VTI PK+EE + P++
Sbjct: 181 VLGIKVKIM--RDPAKSRTGPKA-LPDAVTIVEPKEEEPILAPSV 222
>gi|398364505|ref|NP_014221.3| ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae S288c]
gi|1173255|sp|P05750.5|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13;
AltName: Full=YS3
gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506099|pdb|3U5C|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506137|pdb|3U5G|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae]
gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae]
gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae]
gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789]
gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a]
gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291]
gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118]
gi|285814479|tpg|DAA10373.1| TPA: ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae
S288c]
gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796]
gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13]
gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3]
gi|349580763|dbj|GAA25922.1| K7_Rps3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763526|gb|EHN05054.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296815|gb|EIW07916.1| Rps3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 240
Score = 316 bits (809), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 154/225 (68%), Positives = 187/225 (83%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + GP LPD VTI PK+EE + P++
Sbjct: 181 VLGIKVKIM--RDPAKSRTGPKA-LPDAVTIIEPKEEEPILAPSV 222
>gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 234
Score = 315 bits (808), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 157/225 (69%), Positives = 187/225 (83%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVAFISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFKF ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKFKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP K GP LPD VTI PK+EE+ + P++
Sbjct: 181 VLGIKVKIM--RDPARSKVGPRA-LPDAVTIVEPKEEEKILVPSV 222
>gi|363754787|ref|XP_003647609.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891246|gb|AET40792.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 328
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 154/224 (68%), Positives = 185/224 (82%), Gaps = 2/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M T ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 85 MVTVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 144
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESL++KLL GLA+RRA Y
Sbjct: 145 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLKFKLLNGLAIRRAAY 204
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG+++ SGQPVN++ID+A RHVLLRQG
Sbjct: 205 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQG 264
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP+ + T LPD V I PKDE+ +P++
Sbjct: 265 VLGIKVKIM--KDPSKARTGPTALPDAVEIIEPKDEDVVKEPSV 306
>gi|367008326|ref|XP_003678663.1| 40S ribosomal protein S3 [Torulaspora delbrueckii]
gi|359746320|emb|CCE89452.1| hypothetical protein TDEL_0A01200 [Torulaspora delbrueckii]
Length = 245
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 158/228 (69%), Positives = 186/228 (81%), Gaps = 8/228 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAKSMKF DG+++ SGQPVN++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVNDFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
VLGIKVKIM DP + GP LPD V I PK+EE P L A+
Sbjct: 181 VLGIKVKIM--RDPAQSRTGPKA-LPDAVKIVEPKEEE----PILAAS 221
>gi|403216300|emb|CCK70797.1| hypothetical protein KNAG_0F01290 [Kazachstania naganishii CBS
8797]
Length = 249
Score = 314 bits (805), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 157/227 (69%), Positives = 184/227 (81%), Gaps = 6/227 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLFAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
VLGIKVKIM N K GP LPD VTI PKDEE P LVA+
Sbjct: 181 VLGIKVKIMRDPATNTK-GPKA-LPDAVTIVEPKDEE----PVLVAS 221
>gi|444317298|ref|XP_004179306.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
gi|387512346|emb|CCH59787.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
Length = 248
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/221 (70%), Positives = 185/221 (83%), Gaps = 4/221 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLGE GR
Sbjct: 13 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLGENGR 72
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELT +VQKRFK+ SV LYAE++ +RGL A+AQAES+++KLL GLA+RRA YGV+R
Sbjct: 73 RINELTLLVQKRFKYKAGSVVLYAERIQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 132
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQGVLGI
Sbjct: 133 YVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 192
Query: 185 KVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
KVKIM DP + GP + LPD V I PK+EE V P++
Sbjct: 193 KVKIM--RDPARARFGPRS-LPDAVKIVEPKEEETIVAPSV 230
>gi|254564691|ref|XP_002489456.1| 40S ribosomal protein S3 [Komagataella pastoris GS115]
gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Komagataella pastoris CBS 7435]
Length = 243
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/218 (71%), Positives = 175/218 (80%), Gaps = 2/218 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAEDGYSGVEVRVTP TEIIIRAT+T +VLGE GR
Sbjct: 6 ISKKRKLVADGVFYAELNEYFTRELAEDGYSGVEVRVTPTTTEIIIRATQTNSVLGENGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRFK E V LYAE+V +RGL A+ Q ESLRYKLL GLA+RRA YGV+R
Sbjct: 66 RIRELTALVQKRFKIDEGKVILYAERVQDRGLSAVTQCESLRYKLLNGLAIRRAAYGVVR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F+M+SGAKG EV+VSGKLRA RAKSMKF DG+M+ SGQP ++I++A RHVLLRQGVLGI
Sbjct: 126 FVMDSGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPAKDFIETATRHVLLRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
KVKIM DP + LPD V IH PKDE E P
Sbjct: 186 KVKIM--RDPAAARTGPKALPDFVKIHEPKDEREVPAP 221
>gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae]
Length = 240
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 186/225 (82%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGV +AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVNYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + GP LPD VTI PK+EE + P++
Sbjct: 181 VLGIKVKIM--RDPAKSRTGPKA-LPDAVTIIEPKEEEPILAPSV 222
>gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri]
Length = 205
Score = 311 bits (798), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/196 (77%), Positives = 169/196 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV LRQGV+GI
Sbjct: 127 FIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGI 186
Query: 185 KVKIMLSWDPNGKQGP 200
KVKIML +DP G+ GP
Sbjct: 187 KVKIMLPYDPRGQNGP 202
>gi|50306913|ref|XP_453432.1| 40S ribosomal protein S3 [Kluyveromyces lactis NRRL Y-1140]
gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis]
Length = 237
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/236 (63%), Positives = 190/236 (80%), Gaps = 2/236 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRAT+ Q+V+G
Sbjct: 1 MVAIISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATKVQDVVG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +++KRFK+ ++ LYAE+V++RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLIEKRFKYKRGTIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG+++ SGQPVN++I++A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVNDFIETATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA 236
VLGIKVKIM DP+ LPD VTI PK+EE ++P++ P++ A
Sbjct: 181 VLGIKVKIM--KDPSRNTSGPKALPDAVTIIEPKEEEPVLEPSVKDYRPTEPVEAA 234
>gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi]
gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi]
Length = 220
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/214 (72%), Positives = 180/214 (84%), Gaps = 1/214 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
QISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KG
Sbjct: 2 QISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKG 61
Query: 64 RRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RRIRELTS+VQKRF NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 62 RRIRELTSLVQKRFFNKSTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKFKDGY++S+G+P ++++A R L+QGVL
Sbjct: 122 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYLISTGEPSKRFVNTATRSAQLKQGVL 181
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GIKVKIML + + G + LPD +++ PK +
Sbjct: 182 GIKVKIMLPTAIDTRTGLPSILPDNISVLEPKTD 215
>gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba]
gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba]
Length = 156
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/156 (96%), Positives = 153/156 (98%)
Query: 44 MRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAE 103
MRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAE
Sbjct: 1 MRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAE 60
Query: 104 SLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQP 163
SLRYKLLGGLAVRRACYGVLRF+M+SGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQP
Sbjct: 61 SLRYKLLGGLAVRRACYGVLRFVMDSGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQP 120
Query: 164 VNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQG 199
VNEYIDSAVRHVLLRQGVLGIKVKIML WDP GKQG
Sbjct: 121 VNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQG 156
>gi|254580157|ref|XP_002496064.1| 40S ribosomal protein S3 [Zygosaccharomyces rouxii]
gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
Length = 246
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 181/224 (80%), Gaps = 2/224 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSG EVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGTEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ ++ LYAE+V RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 EGGRRINELTLLVQKRFKYKPGTIVLYAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAKSMKF DG+++ SGQPV ++ID+A RHVL+RQG
Sbjct: 121 GVVRYVMESGAKGCEVVVSGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP LPD VTI PK+EE + P++
Sbjct: 181 VLGIKVKIM--RDPATTPSGPNALPDAVTIVDPKEEEPILAPSV 222
>gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax Sal-1]
gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H]
gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax]
gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H]
gi|389585194|dbj|GAB67925.1| 40S ribosomal protein S3 [Plasmodium cynomolgi strain B]
Length = 222
Score = 311 bits (796), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/217 (71%), Positives = 181/217 (83%), Gaps = 1/217 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY++S+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GVLGIKVKIML + K G + LPD +++ PK E
Sbjct: 181 GVLGIKVKIMLPTAVDSKTGLPSILPDNISVLEPKTE 217
>gi|255711614|ref|XP_002552090.1| 40S ribosomal protein S3 [Lachancea thermotolerans]
gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans CBS 6340]
Length = 248
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 154/225 (68%), Positives = 184/225 (81%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFK+ S+ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKYQAGSIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAKSMKF DG+++ SGQPV ++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGCEVVISGKLRAARAKSMKFADGFLIHSGQPVADFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + GP LPD V I PK+EE P++
Sbjct: 181 VLGIKVKIM--RDPARNRVGPKA-LPDAVKILEPKEEEYVESPSV 222
>gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
Length = 221
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 154/217 (70%), Positives = 182/217 (83%), Gaps = 1/217 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKRF-KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+KGRRIRELTS+VQKRF NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRRAC
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRAC 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY++S+G+P ++++A R L+Q
Sbjct: 121 YGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GVLGIKVKIML + + G T+ LPD +++ PK +
Sbjct: 181 GVLGIKVKIMLPTAIDTRTGLTSILPDNISVLEPKTD 217
>gi|367007661|ref|XP_003688560.1| 40S ribosomal protein S3 [Tetrapisispora phaffii CBS 4417]
gi|357526869|emb|CCE66126.1| hypothetical protein TPHA_0O01590 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 310 bits (794), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 182/219 (83%), Gaps = 4/219 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLG
Sbjct: 1 MVAYISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELT +VQKRFKF +V LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 61 ENGRRINELTLLVQKRFKFKAGTVVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV++SGKLRA RAK+MK+ DG+++ SGQPVN++ID A RHVL+RQG
Sbjct: 121 GVIRYVMESGAKGCEVVISGKLRAARAKAMKYADGFLIHSGQPVNDFIDVATRHVLMRQG 180
Query: 181 VLGIKVKIMLSWDPN-GKQGPTTPLPDLVTIHSPKDEEE 218
VLGI++KIM DP+ K GP LPD V I PK+EE+
Sbjct: 181 VLGIRIKIM--RDPSKSKVGPRA-LPDAVNIVEPKEEEK 216
>gi|50553820|ref|XP_504321.1| 40S ribosomal protein S3 [Yarrowia lipolytica]
gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica CLIB122]
Length = 246
Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 149/222 (67%), Positives = 180/222 (81%), Gaps = 4/222 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVR+TP +TEI++RAT T VLGE GR
Sbjct: 7 ISKKRKIVADGVFYAELNEFFTRELAEEGYSGVEVRLTPTKTEIVVRATHTNKVLGENGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIREL S+VQKRF+ PE SV +YAE+V RGL A+AQ ES++YKLL GLA+RRA YGV+R
Sbjct: 67 RIRELMSLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRRAAYGVVR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++M++GAKG EV+VSGKLRA RAKSMKF DG+M+ SGQPVN++ID+A RHVLLRQGVLG+
Sbjct: 127 YVMDAGAKGVEVVVSGKLRAARAKSMKFADGFMIHSGQPVNDFIDTATRHVLLRQGVLGV 186
Query: 185 KVKIMLSWDPNGKQGPTTP--LPDLVTIHSPKDEEEYVKPTL 224
KVKIM DP + P P LPD VTI PK++ +P +
Sbjct: 187 KVKIM--RDPATSKKPGVPKSLPDAVTIFEPKEDAVVAEPMV 226
>gi|406603719|emb|CCH44744.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 246
Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/225 (67%), Positives = 184/225 (81%), Gaps = 4/225 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE GY+GVEVRVTP RTE+IIRAT+T VLG
Sbjct: 1 MVNIISKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRVTPTRTEVIIRATQTNAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
E GRRI ELTS+VQKRFKF ++ LYAE+V +RGL A+AQAESL++KLL GLA+RRA Y
Sbjct: 61 ENGRRIYELTSLVQKRFKFAPGTIVLYAERVQDRGLSAVAQAESLKFKLLNGLAIRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKG EV++SGKLRA RAK+MKF+DG+++ SGQPV ++ID+A RHVLLRQG
Sbjct: 121 GVVRYVMESGAKGVEVVISGKLRAARAKAMKFQDGFLIHSGQPVKDFIDTATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLG+KVKIM DP + GP + LPD V +H PK++E PT+
Sbjct: 181 VLGVKVKIM--RDPATNRVGPKS-LPDYVKVHEPKEDEAIPAPTV 222
>gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 200
Score = 308 bits (790), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 146/191 (76%), Positives = 173/191 (90%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQG+LG
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 184 IKVKIMLSWDP 194
I+VKIM+++DP
Sbjct: 189 IRVKIMMAYDP 199
>gi|391337612|ref|XP_003743161.1| PREDICTED: 40S ribosomal protein S3-like [Metaseiulus occidentalis]
Length = 239
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/218 (70%), Positives = 178/218 (81%), Gaps = 1/218 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M QISKKR+FVADGVF AELNE L RELAE+GYSGVEVR +T+III ATRTQ+VLG
Sbjct: 1 MPGQISKKRRFVADGVFNAELNEFLRRELAENGYSGVEVRNGATKTDIIIMATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGR+IRELT+VVQKRF F E +V L+AEKV+ RGLCAI Q ESLRYKL+GGLAVRRACY
Sbjct: 61 EKGRKIRELTAVVQKRFGFKEGTVNLFAEKVSARGLCAITQCESLRYKLIGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
VLR IME+ A GCEV+VSGKLR QRAKSMKF +G M+ SG P N Y+++AVRHVLL+QG
Sbjct: 121 SVLRCIMEAEAMGCEVVVSGKLRGQRAKSMKFVEGLMIHSGDPTNHYVETAVRHVLLKQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLV-TIHSPKDEE 217
VLGIKVKIM DP GK+GP LPD V + SP +++
Sbjct: 181 VLGIKVKIMHPHDPLGKRGPAQLLPDKVHVVDSPHEDD 218
>gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA]
gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei]
Length = 218
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/214 (72%), Positives = 181/214 (84%), Gaps = 3/214 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KGR
Sbjct: 1 ISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGR 60
Query: 65 RIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RIRELTS+VQKRF F + NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRRACYGV
Sbjct: 61 RIRELTSLVQKRF-FNKLTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 119
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY++S+G+P ++++A R L+QGVL
Sbjct: 120 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVL 179
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GIKVKIML + K G + LPD +++ PK +
Sbjct: 180 GIKVKIMLPTAIDTKTGLPSILPDNISVLEPKTD 213
>gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 219
Score = 299 bits (766), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 167/211 (79%), Gaps = 1/211 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ P TEI IRA++TQ ++GE
Sbjct: 7 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKQGPASTEITIRASKTQAIVGEN 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
RR+ EL S+VQKRF F E +V ++AEKV NRGLCA+AQAESL+ KLL GL VRRACY +
Sbjct: 67 ARRVHELCSLVQKRFGFKEGAVTIFAEKVQNRGLCAVAQAESLKIKLLAGLPVRRACYAI 126
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
L +M GAKGCEVIVSGKLRAQRAKSMKF+DGYM+ SGQP +++D AVRHVLLRQG L
Sbjct: 127 LHQVMTKGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSQQFVDFAVRHVLLRQGTL 186
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
G+KV IML DP GK G T P PD+V I P
Sbjct: 187 GVKVAIMLPHDPTGKNGCTIPQPDIVIIKDP 217
>gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis]
Length = 190
Score = 299 bits (765), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 165/190 (86%)
Query: 28 ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
ELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKGRRIRELT+ +QKRF F ++ VEL+
Sbjct: 1 ELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKDEVELF 60
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRA 147
AEKV NRGLCA+AQ E+LRYKL GGLAVRRACYGV+RF+MESGAKGCEVIVSGKLRAQRA
Sbjct: 61 AEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGCEVIVSGKLRAQRA 120
Query: 148 KSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDL 207
K+MKF DG+M+SSG P EYID+AVRHV +RQG++GIKVKIML DP+GK GP PLPD
Sbjct: 121 KAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKVKIMLPHDPSGKTGPKAPLPDA 180
Query: 208 VTIHSPKDEE 217
+TI K+E+
Sbjct: 181 ITILEAKEED 190
>gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus]
Length = 176
Score = 298 bits (762), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 146/176 (82%), Positives = 154/176 (87%)
Query: 35 SGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNR 94
SGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FP+ +VELYAEKV R
Sbjct: 1 SGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFSFPDGTVELYAEKVAAR 60
Query: 95 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKD 154
GLCAIAQ ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR QRAKSMKF D
Sbjct: 61 GLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRGQRAKSMKFVD 120
Query: 155 GYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTI 210
G+M+ SG P EYIDSAV HV LRQGVLGIKVKIML DP GK GP PLPD V++
Sbjct: 121 GFMIHSGYPTREYIDSAVTHVHLRQGVLGIKVKIMLPHDPTGKSGPKKPLPDQVSV 176
>gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi]
gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 297 bits (760), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 142/215 (66%), Positives = 173/215 (80%), Gaps = 1/215 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
I+KK+ FV G+ +AELNE L RELAEDGYSGVEVR T RTEIIIRATR Q V+G+
Sbjct: 5 ANINKKKHFVHQGLLYAELNEFLKRELAEDGYSGVEVRATVARTEIIIRATRPQTVVGDN 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRR++ELTSV+QKRF F E +ELYAE V N+GL AIAQAESL+ KL+ G+AVR+ACYGV
Sbjct: 65 GRRMKELTSVIQKRFGFEEGKIELYAENVKNKGLSAIAQAESLKQKLMEGVAVRKACYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRF+M+SGAKG VIVSGKLRAQRAKSMKF +GYM+ +GQPV +Y+D AVRHV ++QGVL
Sbjct: 125 LRFVMDSGAKGGAVIVSGKLRAQRAKSMKFAEGYMIRTGQPVKDYVDIAVRHVYMKQGVL 184
Query: 183 GIKVKIMLSWDPNGKQGPTT-PLPDLVTIHSPKDE 216
GIKVK+ML W + G P PD+V++H PK++
Sbjct: 185 GIKVKVMLPWVVGTQAGSNQKPQPDVVSVHEPKED 219
>gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Ogataea parapolymorpha DL-1]
Length = 235
Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 144/223 (64%), Positives = 177/223 (79%), Gaps = 4/223 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M SKKRK VADGVF+AELNE TREL E+GY+GVEVR+TP +TE+II AT TQ VLG
Sbjct: 1 MVANFSKKRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTEVIISATNTQRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRI ELTS++QKRFKF ++ L+AE+V +RGL A+ Q ESL+YKLL GLAVRRA Y
Sbjct: 61 EKGRRINELTSLIQKRFKFAPGTIVLFAERVQDRGLSAVTQCESLKYKLLNGLAVRRAAY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R +MESGAKG EV++SGK + RAKSMKF DG+M+ SGQPVN++ID A RHVLLRQG
Sbjct: 121 GVIRHVMESGAKGVEVVISGKSKGARAKSMKFGDGFMIHSGQPVNDFIDVATRHVLLRQG 180
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLGIKVKIM DP ++GP LPD V ++ PK++++ +P
Sbjct: 181 VLGIKVKIM--KDPATNRRGPKA-LPDSVVVYDPKEDQQVAEP 220
>gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 192
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/190 (73%), Positives = 168/190 (88%), Gaps = 2/190 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GR
Sbjct: 4 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R
Sbjct: 64 RINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQGVLGI
Sbjct: 124 YVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 183
Query: 185 KVKIMLSWDP 194
KVKIM DP
Sbjct: 184 KVKIM--RDP 191
>gi|343887316|dbj|BAK61862.1| 40S ribosomal protein S3 [Citrus unshiu]
Length = 184
Score = 295 bits (756), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 149/183 (81%), Positives = 159/183 (86%), Gaps = 11/183 (6%)
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GEKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC
Sbjct: 3 GEKGRRIRELTSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 62
Query: 120 YGVLRF-IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLR 178
GVLRF I+ESGAKGCEVIVSGKLRAQRA SMKFKDGYM+SSG PV EYIDSAVRHVLLR
Sbjct: 63 CGVLRFIILESGAKGCEVIVSGKLRAQRATSMKFKDGYMISSGYPVKEYIDSAVRHVLLR 122
Query: 179 Q--------GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
Q GVLGIKVKIML+WD GKQ P TPLPDLVTIH+PK+EE P +++T +E
Sbjct: 123 QASSIFCGYGVLGIKVKIMLAWDAKGKQRPVTPLPDLVTIHTPKEEENV--PPIMSTSLE 180
Query: 231 VPI 233
+PI
Sbjct: 181 LPI 183
>gi|358336359|dbj|GAA54888.1| small subunit ribosomal protein S3e [Clonorchis sinensis]
Length = 230
Score = 295 bits (755), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 148/219 (67%), Positives = 175/219 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
++S KRKF+ GVF AEL+E L RELAEDGYSGV+VR + TE+II AT+TQ+VLGE
Sbjct: 6 KMSLKRKFIKAGVFKAELDEFLKRELAEDGYSGVQVRESRKYTEVIILATKTQSVLGEGC 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV++KRF F E ++EL AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLEKRFGFAEGTLELCAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAKSMKF DG M+ SG PVN YID AVRHVLL QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKSMKFSDGLMIHSGDPVNYYIDKAVRHVLLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IKVKIM++ D +GK GP PLPD VTI + K+E + P
Sbjct: 186 IKVKIMMNHDSSGKTGPRKPLPDTVTILAAKEETAPIHP 224
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 188
Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/189 (73%), Positives = 167/189 (88%), Gaps = 2/189 (1%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
SKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GRR
Sbjct: 1 SKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 60
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
I ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R+
Sbjct: 61 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 120
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
+MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQGVLGIK
Sbjct: 121 VMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIK 180
Query: 186 VKIMLSWDP 194
VKIM DP
Sbjct: 181 VKIM--RDP 187
>gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 158/233 (67%), Positives = 165/233 (70%), Gaps = 56/233 (24%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR Y
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR--Y 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
V F +G
Sbjct: 119 HVFEF-----------------------------------------------------RG 125
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
VLGIKVKIML WDP GK GP TPLPDLVTIH PK+EEEYV P + T+IE+P+
Sbjct: 126 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVPPVM-TTNIEIPV 177
>gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii]
gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii]
Length = 246
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 173/210 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M ++SK++KF+ DGVFF+ELNE+L+REL+++GY+ VE+R P++TEII++ T+T ++LG
Sbjct: 30 MNKKLSKQKKFINDGVFFSELNELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILG 89
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+GRRI+E+ +++KRF+F E S+E+Y EK+ N+ LCAI+QAESLRYKLL G+ +RRACY
Sbjct: 90 SRGRRIKEINGLIKKRFQFDEKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACY 149
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
L+ MESGAKGC + VSGKLRAQRAK+MKF DGY++ SG+PV +YI+ A RH LRQG
Sbjct: 150 STLKSTMESGAKGCIISVSGKLRAQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQG 209
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTI 210
V+GIK+ IML WDP G +GP PLPD+VT+
Sbjct: 210 VIGIKISIMLPWDPAGVRGPKKPLPDVVTV 239
>gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 165
Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 141/164 (85%), Positives = 148/164 (90%)
Query: 34 YSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNN 93
YSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV
Sbjct: 1 YSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVAT 60
Query: 94 RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFK 153
RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF
Sbjct: 61 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFV 120
Query: 154 DGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGK 197
DG M+ SG P NEY+D+A RHVLLRQGVLGIKVKIML WDPNGK
Sbjct: 121 DGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGK 164
>gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 172/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 172/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTLRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum]
Length = 230
Score = 290 bits (742), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 172/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3
in Mus musculus [Schistosoma japonicum]
Length = 226
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 172/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 289 bits (740), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 171/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPNGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans]
Length = 225
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 171/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 1 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 60
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 61 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 120
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN YID AVRHV L QG+LG
Sbjct: 121 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILG 180
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIML D +GK+GP PLPD VTI + K+E
Sbjct: 181 IKVKIMLDHDSSGKKGPRKPLPDTVTILAAKEE 213
>gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 230
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 144/213 (67%), Positives = 171/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN YID AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIML D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMLDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 172/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESL+YKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLKYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|379994413|gb|AFD22833.1| 40S ribosomal protein S3 [Collodictyon triciliatum]
Length = 173
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 136/173 (78%), Positives = 156/173 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M+ +ISKK+KFVADGVFFAELNE TR+L EDGY+GVEVRVTP RTE+IIRATRTQNVLG
Sbjct: 1 MSLEISKKKKFVADGVFFAELNEFFTRQLGEDGYAGVEVRVTPARTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTS+VQKRF+F E ++EL+AE V++RGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61 DKGRRIRELTSLVQKRFRFKEGTIELFAENVSSRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 173
GV+RF ME+GAKG EV VSGKLRAQRAK MKF+DGYM+ SG P Y+DSAVR
Sbjct: 121 GVMRFAMEAGAKGVEVAVSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVR 173
>gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 172/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG ++ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLLIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala]
Length = 170
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/170 (82%), Positives = 152/170 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT+ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT NVLG
Sbjct: 1 MATRISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVR+ACY
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRQACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDS 170
GVLRFIMESGA GCEV+VSGKLR QRAK++KF DG M+ G+P N+Y ++
Sbjct: 121 GVLRFIMESGANGCEVVVSGKLRGQRAKALKFVDGLMIHRGEPTNDYAET 170
>gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 171/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAE LRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAEPLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|426369809|ref|XP_004051876.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Gorilla gorilla
gorilla]
Length = 206
Score = 287 bits (734), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 145/163 (88%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 17 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 76
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 173
AVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR
Sbjct: 77 AVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 136
Query: 174 HVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
HVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 137 HVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 179
>gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/213 (67%), Positives = 171/213 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+ACYG+L
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGIL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
RFIMESGA+G EVIVSGK++ QRAK+MKF G M+ SG PVN Y+D AVRHV L QG+LG
Sbjct: 126 RFIMESGARGAEVIVSGKIKGQRAKAMKFCYGLMIHSGDPVNYYVDKAVRHVQLPQGILG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 186 IKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 218
>gi|385302955|gb|EIF47058.1| 40s ribosomal protein s3 [Dekkera bruxellensis AWRI1499]
Length = 261
Score = 286 bits (731), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/222 (62%), Positives = 171/222 (77%), Gaps = 2/222 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+A+ ISK RK VADGVF+AELNE TREL E+GY+GVEVR+TP +T++IIRA++T VLG
Sbjct: 2 VASHISKTRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTDVIIRASQTAMVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT ++QKRF F S+ LYAE+V ++GL A Q ESLR+KLL GLAVRRA Y
Sbjct: 62 EKGRRIRELTMLLQKRFHFAPGSIVLYAERVRDKGLSAATQCESLRFKLLNGLAVRRAAY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+RF ME+GAKG EVI++GK + RAK+MKF DG+M+ +GQP ++ID A RHVL+RQG
Sbjct: 122 GVIRFAMEAGAKGVEVIIAGKAKGARAKAMKFADGFMIHTGQPAKDFIDVACRHVLMRQG 181
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
VLG+KVKIML DP Q LPD V +H PK+ E P
Sbjct: 182 VLGLKVKIML--DPATSQRGPKXLPDAVIVHEPKETEAIETP 221
>gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 137/179 (76%), Positives = 159/179 (88%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ L
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQVFL 187
>gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/176 (77%), Positives = 158/176 (89%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRRA YGVL
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVL 128
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
RF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V +RQ
Sbjct: 129 RFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNVDMRQ 184
>gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 250
Score = 282 bits (722), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 172/228 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 21 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 80
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 81 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 140
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
V+R IMESGAKGCEV +SGKLR QRA+ M FK+GYM+ SG ++ SAVR VLLR G
Sbjct: 141 SVMRLIMESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMG 200
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
++GIKV IML DP+GK GP +PD+V I +PKDE VK ++ +
Sbjct: 201 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDESTTVKTEVIPAN 248
>gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 244
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 172/228 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
V+R IMESGAKGCEV +SGKLR QRA+ M FK+GYM+ SG ++ SAVR VLLR G
Sbjct: 135 SVMRLIMESGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMG 194
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
++GIKV IML DP+GK GP +PD+V I +PKDE VK ++ +
Sbjct: 195 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDESTTVKTEVIPAN 242
>gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702147|gb|EMD42841.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
gi|449710680|gb|EMD49710.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
Length = 244
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/228 (58%), Positives = 172/228 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRRA
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
V+R IM+SGAKGCEV +SGKLR QRA+ M FK+GYM+ SG ++ SAVR VLLR G
Sbjct: 135 SVMRLIMDSGAKGCEVSISGKLRGQRAQGMVFKEGYMIKSGNATRQFYSSAVRCVLLRMG 194
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
++GIKV IML DP+GK GP +PD+V I +PKDE VK ++ +
Sbjct: 195 IIGIKVTIMLDTDPSGKNGPAARIPDVVEIKTPKDESTTVKTEVIPAN 242
>gi|355567874|gb|EHH24215.1| hypothetical protein EGK_07837 [Macaca mulatta]
Length = 207
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 155/216 (71%), Gaps = 36/216 (16%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE LT ELAE+ YSGVE
Sbjct: 1 MAVQISKKRKFVTDGMFKAELNEFLTWELAEECYSGVE---------------------- 38
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 39 --------------KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 84
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVL+FIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVL RQG
Sbjct: 85 GVLQFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLFRQG 144
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VLGIKVKIML W+P GK GP PLPD ++I PKDE
Sbjct: 145 VLGIKVKIMLPWNPTGKIGPKKPLPDHMSIVGPKDE 180
>gi|198456485|ref|XP_002136327.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
gi|198142674|gb|EDY71398.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 138/192 (71%), Positives = 157/192 (81%), Gaps = 3/192 (1%)
Query: 41 VTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA 100
VTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RGLCAIA
Sbjct: 1 VTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIA 60
Query: 101 QAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSS 160
QAESLRYKL GGLAVRRACYGVLRFI+ESGAKGCEV+VSGKLR QRAKSMKF DG M+ S
Sbjct: 61 QAESLRYKLTGGLAVRRACYGVLRFIIESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHS 120
Query: 161 GQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
G P N+Y+++A RHVLLRQGVLGIKVKIML +DP K GP PLPD V++ PK+E+ Y
Sbjct: 121 GDPCNDYVETATRHVLLRQGVLGIKVKIMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYE 180
Query: 221 KPTLVATDIEVP 232
P T+ ++P
Sbjct: 181 TP---ETEYKIP 189
>gi|440301734|gb|ELP94120.1| 40S ribosomal protein S3-1, putative [Entamoeba invadens IP1]
Length = 246
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 130/228 (57%), Positives = 174/228 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL DGYSGVE+R + +IIIRATR N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELCADGYSGVEIRKNANKFQIIIRATRASNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTS++ RF F +N +EL+ EKV +RGLC ++QAES++YK+ G+ VRRA
Sbjct: 75 DKGRRIRELTSLMISRFGFKKNCLELFVEKVASRGLCPVSQAESIKYKIAEGVPVRRAVG 134
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
V++ IMESGA GCEV++SGKLR QRA+ M FK+GY++ SG ++ SA+R VLLR G
Sbjct: 135 SVMKLIMESGALGCEVVISGKLRGQRAQHMIFKEGYLIKSGNATRQFYASAIRCVLLRMG 194
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
++GIKV IML+ DP GK GP +PD++ I +PKDE +VK ++VA +
Sbjct: 195 IIGIKVNIMLNTDPTGKTGPAARIPDVIEIKTPKDEVSWVKTSVVAAN 242
>gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
Length = 218
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/214 (64%), Positives = 168/214 (78%), Gaps = 3/214 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ Q+SKKRKFV DGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 4 SLQMSKKRKFVLDGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY
Sbjct: 64 PNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACY 123
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
++ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYM+ SGQP +++D A RHVLLRQG
Sbjct: 124 AIVHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFVDFACRHVLLRQG 183
Query: 181 VLGIKVKIMLSWDPNGK-QGPT-TPLPDLVTIHS 212
LG+KV IML +D +GK G P PD+V I S
Sbjct: 184 TLGVKVAIMLPYDESGKIHGACKIPQPDIVLIKS 217
>gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis]
Length = 229
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 138/222 (62%), Positives = 172/222 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT+ + RKF+ G+F AEL+E+L RELAEDGYSG+ VR T +TE+II AT+TQNVLG
Sbjct: 1 MATKETTTRKFIKAGLFKAELDEMLKRELAEDGYSGIMVRGTHPKTEVIISATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
++ +RIRELTS+++KRF F + ++ LYA+KV RG+ A+AQAESL+Y+L GG+ VR+ACY
Sbjct: 61 DESKRIRELTSLIEKRFAFEQGTLSLYADKVAVRGISAVAQAESLKYRLTGGMPVRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
VL+ IMES AKG EVIVSGK++ QRAK+MKF DG M+ SG PVN YI AVRHVLL QG
Sbjct: 121 AVLKQIMESEAKGGEVIVSGKIKGQRAKAMKFTDGLMIHSGDPVNYYIAKAVRHVLLPQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
+LGIKVKIML DP GK G LPD + I PK+E VKP
Sbjct: 181 ILGIKVKIMLDHDPAGKTGCKKTLPDHLYISEPKEEVVPVKP 222
>gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
gi|74834663|sp|P90526.1|RS3_DICDI RecName: Full=40S ribosomal protein S3
gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum]
gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
Length = 218
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/212 (65%), Positives = 165/212 (77%), Gaps = 3/212 (1%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 4 SLQISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY
Sbjct: 64 PNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACY 123
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
++ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYM+ SGQP ++ID A RHVLLRQG
Sbjct: 124 AIVHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQG 183
Query: 181 VLGIKVKIMLSWDPNGK--QGPTTPLPDLVTI 210
LG+KV IML +D K P PD+V I
Sbjct: 184 TLGVKVAIMLPYDETRKIHGACNIPQPDVVVI 215
>gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
Length = 263
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/174 (77%), Positives = 147/174 (84%)
Query: 49 IIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK 108
+IRAT TQ VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYK
Sbjct: 49 VIRATHTQEVLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYK 108
Query: 109 LLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYI 168
LL GLAVRRACYGVLRFIMESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP E+I
Sbjct: 109 LLNGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKEFI 168
Query: 169 DSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
DSA RHVLLRQGVLGIKVKIM DP GK GP LPD VTI PK+E+ ++P
Sbjct: 169 DSATRHVLLRQGVLGIKVKIMRGSDPEGKAGPQKTLPDSVTIIEPKEEQPVLQP 222
>gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis]
gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 170/217 (78%), Gaps = 1/217 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
M++Q ISKK + VADGVF+AEL+E+L REL+E GYSGV +R + M+TEIIIRA R Q ++
Sbjct: 1 MSSQRISKKHQCVADGVFYAELDELLNRELSEVGYSGVSIRKSTMKTEIIIRAPRPQEII 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
GE RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRRA
Sbjct: 61 GENSRRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAA 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
Y V+R +E+GAKGCEVIVSGKLR QRA +MKFK+GYM+ +G E++D A RHVL++Q
Sbjct: 121 YAVIRSALEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGNACKEFVDEATRHVLVKQ 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
G+LG+KV+IM DP G+ GP LPD++ +H PK++
Sbjct: 181 GMLGVKVRIMKPTDPEGRLGPKKALPDIIVVHEPKEQ 217
>gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/213 (60%), Positives = 167/213 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
++SKKR+ VADGVF+AEL+E+L RELAE GYSGV +R + M+TEIIIRA R Q ++GE
Sbjct: 5 RVSKKRQCVADGVFYAELDELLNRELAEVGYSGVSIRKSTMKTEIIIRAPRPQEIIGENS 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRRA V+
Sbjct: 65 RRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAATAVI 124
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
R +E+GAKGCEVIVSGKLR QRA +MKFK+GYM+ +G E++D A RHVL++QG+LG
Sbjct: 125 RSALEAGAKGCEVIVSGKLRQQRANAMKFKEGYMIKTGYACKEFVDEATRHVLVKQGMLG 184
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
+KV+IM DP G+ GP LPD++ +H PK++
Sbjct: 185 VKVRIMKPTDPEGRLGPKKALPDIIVVHEPKEQ 217
>gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 172
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 133/166 (80%), Positives = 146/166 (87%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVR TP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRATPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDS 170
+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++
Sbjct: 127 YIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVET 172
>gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis]
Length = 166
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 132/166 (79%), Positives = 143/166 (86%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
III ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRY
Sbjct: 1 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 60
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEY 167
KL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y
Sbjct: 61 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDY 120
Query: 168 IDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
+++A RHVLLRQGVLGIKVKIML WD GK GP P PD + + SP
Sbjct: 121 VNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTSP 166
>gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
Length = 238
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/232 (59%), Positives = 172/232 (74%), Gaps = 4/232 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE++ RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIVIYAERIEERGLSAAVQAEALKSKLLNGLPMRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP N++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMAAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTNDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
+VKIM DP + GP LPD V I KDE+E V V + VP +V
Sbjct: 186 RVKIM--KDPATARVGPKA-LPDAVLISEAKDEDEVVPAPTVKSYKAVPEKV 234
>gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 242
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/222 (62%), Positives = 171/222 (77%), Gaps = 5/222 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR T +TE+I++A+ TQ VLGE+GR
Sbjct: 9 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTNTKTEVIVKASNTQGVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK P++ + +YAE+V R L A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 69 RIHELTSLIVKRFKLPQDGIVIYAERVEERALSAAVQAEALKAKLLSGLPIRRAAYGVLR 128
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP E+ID+A+RHVL+RQGVLGI
Sbjct: 129 FTMAAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTREFIDTAIRHVLMRQGVLGI 188
Query: 185 KVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYV-KPTL 224
+VKIM DP K GP LPD V I K+E+E V PT+
Sbjct: 189 RVKIM--RDPAKNKFGPKA-LPDAVMIAEYKEEDESVPAPTV 227
>gi|448103770|ref|XP_004200121.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359381543|emb|CCE82002.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 168/223 (75%), Gaps = 3/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + V +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLICKRFKISQEGVVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPARDFIDLAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTLVA 226
KVKIM DP + LPD V I KDE+E + PT+ A
Sbjct: 186 KVKIM--KDPAASRVGPKALPDNVVISEAKDEDEIIPAPTVKA 226
>gi|344303916|gb|EGW34165.1| hypothetical protein SPAPADRAFT_49231 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 138/222 (62%), Positives = 168/222 (75%), Gaps = 5/222 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQAVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK V +YAE++ R L A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLITKRFKLSPEGVAIYAERIEERALSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP N++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYV-KPTL 224
KVKIM DP K GP LPD V I KDE+E + PT+
Sbjct: 186 KVKIM--KDPATNKFGPRA-LPDAVKIAEAKDEDEIIPAPTV 224
>gi|354546036|emb|CCE42765.1| hypothetical protein CPAR2_204080 [Candida parapsilosis]
Length = 247
Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGV
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKTKLLNGLPIRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRF M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP N++ID A+RHVL+RQGVL
Sbjct: 125 LRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVL 184
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
G+KVKIM DP + LPD V I KDE+E +
Sbjct: 185 GVKVKIM--KDPEANRFGPRALPDAVKIAEAKDEDEVI 220
>gi|448526764|ref|XP_003869393.1| Rps3 ribosomal protein S3 [Candida orthopsilosis Co 90-125]
gi|380353746|emb|CCG23258.1| Rps3 ribosomal protein S3 [Candida orthopsilosis]
Length = 247
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 165/218 (75%), Gaps = 2/218 (0%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGV
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGV 124
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LRF M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP N++ID A+RHVL+RQGVL
Sbjct: 125 LRFAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVL 184
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
G+KVKIM DP + LPD V I KDE+E +
Sbjct: 185 GVKVKIM--KDPAANRFGPRALPDAVKIAEAKDEDEVI 220
>gi|448100073|ref|XP_004199265.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359380687|emb|CCE82928.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/223 (60%), Positives = 168/223 (75%), Gaps = 3/223 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 KIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPAKDFIDLAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTLVA 226
KVKIM DP + LPD V I KDE+E + PT+ A
Sbjct: 186 KVKIM--KDPAASRIGPKALPDNVVISEAKDEDEIIPAPTVKA 226
>gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 247
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 134/216 (62%), Positives = 164/216 (75%), Gaps = 2/216 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP N++ID A+RHVL+RQGVLG+
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGV 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
KVKIM DP + LPD V I KDE+E V
Sbjct: 186 KVKIM--KDPAQNRFGPRALPDAVKIAEAKDEDEVV 219
>gi|50427849|ref|XP_462537.1| 40S ribosomal protein S3 [Debaryomyces hansenii CBS767]
gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii CBS767]
Length = 239
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 170/222 (76%), Gaps = 5/222 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKSKLLNGLPLRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYV-KPTL 224
KVKIM DP K GP + LPD V I KD++E + PT+
Sbjct: 186 KVKIM--KDPATNKFGPKS-LPDAVKISEAKDDDEIIPAPTV 224
>gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea]
Length = 156
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/156 (86%), Positives = 141/156 (90%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
ATQ+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVT RTEIII AT+TQNVLGE
Sbjct: 1 ATQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTQTRTEIIILATKTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRRACYG
Sbjct: 61 KGRRIRELTAVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYG 120
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
VL+FIMES AKGCEV+VSGKLR QRAKSM F DG M
Sbjct: 121 VLKFIMESQAKGCEVVVSGKLRGQRAKSMTFVDGLM 156
>gi|126132980|ref|XP_001383015.1| 40S ribosomal protein S3 [Scheffersomyces stipitis CBS 6054]
gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 165/221 (74%), Gaps = 3/221 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLLVKRFKLSPEGIVIYAERVEERGLSAAVQAEGLKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYSDGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTL 224
KVKIM DP + LPD V I KDE+E + PT+
Sbjct: 186 KVKIM--KDPAANRFGPKSLPDAVKISEAKDEDEVIPAPTV 224
>gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1]
Length = 251
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 166/221 (75%), Gaps = 3/221 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTL 224
KVKIM DP + LPD V I KDE+E + PT+
Sbjct: 186 KVKIM--KDPAANRFGPRALPDAVKIAEAKDEDEVIPAPTV 224
>gi|241958636|ref|XP_002422037.1| 40S ribosomal protein S3 [Candida dubliniensis CD36]
gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 254
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 166/221 (75%), Gaps = 3/221 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTL 224
KVKIM DP + LPD V I KDE+E + PT+
Sbjct: 186 KVKIM--KDPAANRFGPKALPDAVKIAEAKDEDEVIPAPTV 224
>gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
Length = 248
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 135/221 (61%), Positives = 165/221 (74%), Gaps = 3/221 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEGLKAKLLNGLPIRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLRA RAKS K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV-KPTL 224
KVKIM DP + LPD V I KDE+E + PT+
Sbjct: 186 KVKIM--KDPAANRFGPKALPDAVKIAEAKDEDEVIPAPTV 224
>gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians]
Length = 189
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/162 (79%), Positives = 140/162 (86%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELTS+VQ+RF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLA
Sbjct: 1 TQNVLGEKGRRIRELTSLVQRRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLA 60
Query: 115 VRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRH 174
VRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMK DG M+ SG+P Y+D+AVRH
Sbjct: 61 VRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKSTDGLMIHSGEPRRHYVDTAVRH 120
Query: 175 VLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
V LRQGVLGIKVKIML WDP GK GP TPLPD + I PKDE
Sbjct: 121 VHLRQGVLGIKVKIMLPWDPTGKNGPRTPLPDHINIVEPKDE 162
>gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus]
Length = 147
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/147 (91%), Positives = 138/147 (93%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 1 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 61 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 120
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMK 151
FIMESGAKGCEV+VSGKLR QRAKSMK
Sbjct: 121 FIMESGAKGCEVVVSGKLRGQRAKSMK 147
>gi|390988241|gb|AFM36762.1| ribosomal protein S3, partial [Agrotis ipsilon]
Length = 192
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 129/168 (76%), Positives = 142/168 (84%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
Q+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAV
Sbjct: 6 QSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAV 65
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHV 175
RRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHV
Sbjct: 66 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHV 125
Query: 176 LLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
LLRQGVLGIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 126 LLRQGVLGIKVKIMLPWDKQGKNGPKKPQPDHILVTEPKDEPVPLEPT 173
>gi|402586120|gb|EJW80058.1| 30S ribosomal protein S3 [Wuchereria bancrofti]
Length = 202
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 131/176 (74%), Positives = 144/176 (81%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
+III ATRTQ+VLGE+GRRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLR
Sbjct: 2 QIIILATRTQSVLGERGRRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLR 61
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNE 166
YKL+GGLAVRRACYGVLRFIMES A+GCEVIVSGKLR QRAKSMKF DG M+ SGQPVN+
Sbjct: 62 YKLVGGLAVRRACYGVLRFIMESNAQGCEVIVSGKLRGQRAKSMKFVDGLMIHSGQPVND 121
Query: 167 YIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
YI AVRHV LRQGVLGIKVKIML DP G GP LPD + I P + + P
Sbjct: 122 YIQQAVRHVQLRQGVLGIKVKIMLPHDPKGNMGPRIALPDQIHIQEPNEAPNPLHP 177
>gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica]
Length = 165
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/162 (80%), Positives = 141/162 (87%)
Query: 36 GVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
GVEVRVTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RG
Sbjct: 3 GVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFSFEPGRIELYAEKVATRG 62
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDG 155
LCAIAQAESLRYKL GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG
Sbjct: 63 LCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDG 122
Query: 156 YMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGK 197
M+ SG P N+Y+++A RHVLLRQGVLGIKVKIML +DP K
Sbjct: 123 LMIHSGDPCNDYVETATRHVLLRQGVLGIKVKIMLPYDPKNK 164
>gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus]
Length = 177
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/147 (91%), Positives = 137/147 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRA 147
GVLRFIMESGAKGCEV+VSGKLR QRA
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRA 147
>gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
Length = 210
Score = 267 bits (682), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 164/206 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S K+K VADGVFF+E+NE+L+REL E+GYSG+E++ + ++TE+I++ RT+ ++ G+
Sbjct: 2 LSGKKKIVADGVFFSEVNELLSRELREEGYSGMELKKSSIKTELILKTVRTKQMIISGGK 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRE+T +V+KRF ++++ +Y EKV NRGL + QAE LRYKLL G+ R+ACY VLR
Sbjct: 62 RIREITLLVKKRFGLEDSNLNIYVEKVINRGLVSSIQAEFLRYKLLKGITTRKACYSVLR 121
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKGC + +SGKLRAQRAKSMKF +GY++ SGQ V YI S+ RH +L+QGV+GI
Sbjct: 122 SIMESGAKGCLITISGKLRAQRAKSMKFTEGYIIHSGQAVKNYISSSTRHCILKQGVIGI 181
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTI 210
K+ IML WDP GK+GP PLPD+VTI
Sbjct: 182 KISIMLPWDPYGKKGPVNPLPDMVTI 207
>gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500]
Length = 221
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 139/213 (65%), Positives = 162/213 (76%), Gaps = 3/213 (1%)
Query: 4 QISKKRK--FVADGVFFAELNEVLTRELAED-GYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+I KK + FVADGVF AELNE+ TRE +D GYSGVE++ P TEIIIRA++TQ ++G
Sbjct: 7 KIEKKWRVVFVADGVFHAELNELFTREFNKDEGYSGVELKTGPASTEIIIRASKTQAIVG 66
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ RRI EL S+VQKRF F E +V LYAEKV NRGLCAIAQA+SL+ KLL GL VRRACY
Sbjct: 67 QNARRIHELCSLVQKRFGFAEGTVTLYAEKVQNRGLCAIAQADSLKGKLLLGLPVRRACY 126
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
++ IM GAKGCEVIVSGKLRAQRAK+MKF DGYM+ SGQP +D A HVLLRQG
Sbjct: 127 AIVHQIMTKGAKGCEVIVSGKLRAQRAKAMKFTDGYMIKSGQPSQNMVDFACCHVLLRQG 186
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
LG+KV IML +DP GK G TP PD+V I P
Sbjct: 187 TLGVKVAIMLPYDPTGKNGVQTPQPDIVVIKDP 219
>gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus]
Length = 145
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 133/145 (91%), Positives = 136/145 (93%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRI
Sbjct: 1 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 60
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI
Sbjct: 61 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 120
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMK 151
MESGAKGCEV+VSGKLR QRAKSMK
Sbjct: 121 MESGAKGCEVVVSGKLRGQRAKSMK 145
>gi|154343872|ref|XP_001567880.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++DSA RH +R G +G+
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
KVKIML D G+ GP+ PLPD++T+ PK
Sbjct: 184 KVKIMLPSDSTGRNGPSEPLPDVITVIEPKQ 214
>gi|154334600|ref|XP_001563547.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++DSA RH +R G +G+
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
KVKIML D G+ GP+ PLPD++T+ PK
Sbjct: 184 KVKIMLPGDSTGRNGPSEPLPDVITVIEPKQ 214
>gi|146082044|ref|XP_001464434.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|146097654|ref|XP_001468174.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|157866908|ref|XP_001682009.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|157874873|ref|XP_001685848.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|401418259|ref|XP_003873621.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401427716|ref|XP_003878341.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 219
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++DSA RH +R G +G+
Sbjct: 124 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
KVKIML D G+ GP+ PLPD++T+ PK
Sbjct: 184 KVKIMLPGDSTGRNGPSEPLPDVITVIEPKQ 214
>gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus]
Length = 168
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/145 (91%), Positives = 135/145 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQ 145
GVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQ 145
>gi|398021515|ref|XP_003863920.1| 40S ribosomal protein S3, putative [Leishmania donovani]
gi|322502154|emb|CBZ37237.1| 40S ribosomal protein S3, putative [Leishmania donovani]
Length = 342
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 159/211 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 127 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 186
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRRA G++R
Sbjct: 187 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 246
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++DSA RH +R G +G+
Sbjct: 247 YVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGV 306
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
KVKIML D G+ GP+ PLPD++T+ PK
Sbjct: 307 KVKIMLPGDSTGRNGPSEPLPDVITVIEPKQ 337
>gi|154284746|ref|XP_001543168.1| 40S ribosomal protein S3 [Ajellomyces capsulatus NAm1]
gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
Length = 239
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 139/218 (63%), Positives = 154/218 (70%), Gaps = 32/218 (14%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLR
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
FIMESGAKGCEV+VSGKLRA RAKSMKF
Sbjct: 128 FIMESGAKGCEVVVSGKLRAARAKSMKFTS------------------------------ 157
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
K + P G+ G LPD VTI PK+E+ ++P
Sbjct: 158 --KSCAAAIPEGEVGSPEILPDSVTIIEPKEEQPVLQP 193
>gi|344231772|gb|EGV63654.1| ribosomal protein S3 [Candida tenuis ATCC 10573]
gi|344231773|gb|EGV63655.1| hypothetical protein CANTEDRAFT_114699 [Candida tenuis ATCC 10573]
Length = 237
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 166/228 (72%), Gaps = 4/228 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ Q VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEHGYAGVEVRRTPTKLEIIVKASNPQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I ELTS++ KRFK + V +YAE+V RGL A QAE L+ KLL GL RRA YGVLR
Sbjct: 66 KIHELTSLICKRFKLAKEGVVIYAERVEIRGLSAAVQAEGLKAKLLSGLPFRRAAYGVLR 125
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
F M +GAKG EV++SGKLR RAK+ K+ DG+M+ SGQP ++ID A+RHVL+RQGVLGI
Sbjct: 126 FAMNNGAKGVEVVISGKLRGARAKAQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 185 KVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
+VKIM DP K GP LPD V + KD+EE + V + I V
Sbjct: 186 RVKIM--KDPATNKFGPKA-LPDAVKVAEAKDDEEVIPAPTVKSYIPV 230
>gi|399949695|gb|AFP65353.1| 40S ribosomal protein S3 [Chroomonas mesostigmatica CCMP1168]
Length = 217
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 114/210 (54%), Positives = 163/210 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M + +S K+KF+ DGVFF+ELNE L +EL+E+GY+ VE+R TP++ EII++ T++ ++
Sbjct: 1 MKSILSIKKKFIIDGVFFSELNEFLCKELSEEGYANVEIRKTPLKIEIILKMTQSYTIMS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRI E++++++KRF F +N + L+ EK+ NRGL A +QAE LRYKL+ G+ R+ACY
Sbjct: 61 YKGRRIGEISAMIKKRFNFGDNFISLFVEKIINRGLSANSQAELLRYKLVKGIITRKACY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
+LR MESGAKGC + VSGK++ QRAK+MKF DGY++ SGQPV +Y++ A RH L+QG
Sbjct: 121 SILRSTMESGAKGCLISVSGKIKGQRAKTMKFIDGYIIHSGQPVEDYVEKATRHCFLKQG 180
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTI 210
++G+K+ IML WDP G GP PLPD+VT+
Sbjct: 181 MIGVKISIMLPWDPVGTIGPKKPLPDVVTV 210
>gi|223942381|gb|ACN25274.1| unknown [Zea mays]
gi|413921203|gb|AFW61135.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 148
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 128/136 (94%), Positives = 133/136 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEV 136
GVLRF+MESGAKGCEV
Sbjct: 121 GVLRFVMESGAKGCEV 136
>gi|413917291|gb|AFW57223.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 196
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/138 (92%), Positives = 134/138 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKGCEVIV 138
GVLR++MESGAKGCEV V
Sbjct: 121 GVLRYVMESGAKGCEVSV 138
>gi|379072588|gb|AFC92926.1| ribosomal protein S3B, partial [Pipa carvalhoi]
gi|379072590|gb|AFC92927.1| ribosomal protein S3B, partial [Rhinophrynus dorsalis]
Length = 162
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/151 (83%), Positives = 134/151 (88%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 61 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 120
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 121 VKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 151
>gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus]
Length = 147
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 130/143 (90%), Positives = 134/143 (93%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 5 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLR
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 125 FIMESGAKGCEVIVSGKLRAQRA 147
FIMESGAKGCEV+VSGKLR QRA
Sbjct: 125 FIMESGAKGCEVVVSGKLRGQRA 147
>gi|340056073|emb|CCC50402.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
gi|340057730|emb|CCC52077.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
Length = 214
Score = 259 bits (663), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 157/210 (74%), Gaps = 3/210 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
ISKKR V DG+F+AEL E L RELA+DG++GVE RVTP RTEI+IRAT+T+ VLGEK R
Sbjct: 4 ISKKRMMVRDGIFYAELFEFLKRELADDGFAGVEHRVTPQRTEIVIRATKTREVLGEKNR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E V+LYAE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACIQQRFNYKEGKVQLYAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++ +A RH LR G +G+
Sbjct: 124 LVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVSTATRHCHLRAGTIGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
KVKIML PN LPD+VT+ PK
Sbjct: 184 KVKIML---PNSMVEEDEVLPDVVTVIEPK 210
>gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407844360|gb|EKG01918.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407849237|gb|EKG04048.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407867308|gb|EKG08545.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 158/211 (74%), Gaps = 3/211 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++D A RH LR G LG+
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
KVKIML P Q LPD++T+ PK+
Sbjct: 184 KVKIML---PKSMQNEEEILPDVITVLEPKE 211
>gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407405323|gb|EKF30377.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 214
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 158/211 (74%), Gaps = 3/211 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++D A RH LR G LG+
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
KVKIML P Q LPD++T+ PK+
Sbjct: 184 KVKIML---PKSMQDEEEILPDVITVLEPKE 211
>gi|407409823|gb|EKF32505.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 253
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 158/211 (74%), Gaps = 3/211 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 43 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 102
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 103 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 162
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG ++D A RH LR G LG+
Sbjct: 163 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGV 222
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
KVKIML P Q LPD++T+ PK+
Sbjct: 223 KVKIML---PKSMQDEEEILPDVITVLEPKE 250
>gi|342184715|emb|CCC94197.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 256 bits (655), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTPMRTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYM+ SG ++D+A+RH LR G +G+
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
KVKIM P LPD+VT+ PK
Sbjct: 184 KVKIM---RPTSMLEEEEVLPDVVTVIEPK 210
>gi|342183330|emb|CCC92810.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 256 bits (654), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 158/210 (75%), Gaps = 3/210 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTPMRTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYM+ SG ++D+A+RH LR G +G+
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDAAIRHCHLRAGTIGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
KVKIM P LPD+VT+ PK
Sbjct: 184 KVKIM---RPTSMLEEEEVLPDVVTVIEPK 210
>gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802224|pdb|3ZEY|X Chain X, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 253 bits (645), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 121/210 (57%), Positives = 157/210 (74%), Gaps = 3/210 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYM+ SG ++D+A RH LR G +G+
Sbjct: 124 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 183
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
VKIM P LPD++T+ PK
Sbjct: 184 NVKIM---RPQSMIEEDEVLPDVITVIEPK 210
>gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 266
Score = 252 bits (644), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 158/213 (74%), Gaps = 3/213 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYM+ SG ++D+A RH LR G +G+
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 235
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VKIM P LPD++T+ PK E
Sbjct: 236 NVKIM---RPQSMIEEDEVLPDVITVIEPKTIE 265
>gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 266
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/213 (57%), Positives = 158/213 (74%), Gaps = 3/213 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
++MESGAKGCEV + GK++ QRAKSM F+DGYM+ SG ++D+A RH LR G +G+
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGV 235
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VKIM P LPD++T+ PK E
Sbjct: 236 NVKIM---RPQSMIEEDEVLPDVITVIEPKTIE 265
>gi|340505471|gb|EGR31795.1| hypothetical protein IMG5_102040 [Ichthyophthirius multifiliis]
Length = 676
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 116/215 (53%), Positives = 162/215 (75%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
QI+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TPM+ EI I+AT+ Q+V+G +G
Sbjct: 7 QINKKKKFVADGVFNAELHCFFSKSLQDAGYAGIEVRRTPMKIEIRIKATKPQHVIGLEG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
++ +ELT +QKRF + + +++ AE V N+GLCA AQ E+L YKLL + VR A ++
Sbjct: 67 KKHKELTYFLQKRFGYANDQLQILAEPVKNKGLCASAQVEALNYKLLKDVPVRLAANYII 126
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
R ++ GAKGCEVI+SGKL+ QRAK+MKFK GYM+ +GQP +Y+D AVRHV +QG++G
Sbjct: 127 RQVINDGAKGCEVIISGKLQQQRAKTMKFKQGYMICTGQPRKDYVDVAVRHVFFKQGIMG 186
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
+KVKIML +DP GK G TP+PD V I+ PK ++
Sbjct: 187 VKVKIMLPYDPTGKFGVRTPIPDNVVINEPKRDDN 221
>gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum]
Length = 163
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 126/157 (80%), Positives = 134/157 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK KFV DG+F A+ E LTRELAEDGYSGVEVR+T RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKWKFVVDGIFKAQWYEFLTRELAEDGYSGVEVRLTLTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG+ IRELT+VVQKRF FPE+SVELYAEKV R LCAI QAESL +KLLGGLAVRR CY
Sbjct: 61 EKGQSIRELTAVVQKRFGFPESSVELYAEKVATRSLCAIGQAESLHHKLLGGLAVRRTCY 120
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
GVL+FIMESGAKG EV VSGKLR QRAKSM F DG M
Sbjct: 121 GVLQFIMESGAKGGEVGVSGKLRGQRAKSMMFVDGLM 157
>gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea]
Length = 194
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/155 (76%), Positives = 130/155 (83%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIM
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLGIKVK
Sbjct: 61 ESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKVK 120
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IM DP+GK GP LPD VTI PK+E+ +P
Sbjct: 121 IMRGSDPDGKAGPQKTLPDAVTIIEPKEEQPVTQP 155
>gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 244
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 146/179 (81%), Gaps = 3/179 (1%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
+ VLGEKGRRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL V
Sbjct: 46 RKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPV 105
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHV 175
RRA YGVLRF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S+G P Y+D A+R+V
Sbjct: 106 RRAAYGVLRFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLSTGTPKEMYVDQAIRNV 165
Query: 176 LLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT-LVATDIEVPI 233
+RQG+LGI+VKIM+++DP GK GP T LPD +TIH PK E+ V P T+ E P+
Sbjct: 166 DMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPK--EDTVFPIEATTTEEEAPV 222
>gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta]
gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta]
Length = 218
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 161/210 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ ++S K+KFVADGV ++E+NE L REL E+G+SG++++ + EIII++++ ++G
Sbjct: 2 LGYRLSLKKKFVADGVVYSEINEFLERELKENGFSGIKIKKKIEKVEIIIKSSKAHTIIG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KG+RIREL +++KRF F EN + LY EK+NNR LC I QAESLRYK+L G +R+ACY
Sbjct: 62 FKGKRIRELNVLLKKRFNFGENKLVLYVEKINNRNLCPINQAESLRYKILRGFVLRKACY 121
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
+LR +E+GAKGC + VSGKLRAQRAK+MKF DGY++ SG+P EY SA+RH LL QG
Sbjct: 122 SILRSTIEAGAKGCIISVSGKLRAQRAKTMKFMDGYIIHSGKPSEEYTKSAIRHCLLPQG 181
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTI 210
V+GIK+ IML WDP G GP PLPD++T+
Sbjct: 182 VIGIKISIMLPWDPCGLIGPKKPLPDVITL 211
>gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila]
gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210]
gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila]
Length = 243
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 114/219 (52%), Positives = 165/219 (75%), Gaps = 5/219 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
I+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TP +TEI I+AT+ Q V+G +G+
Sbjct: 8 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+ +ELT +QKRF + ++ ++++AE + +GLCA AQ E++ YKLL + VR A +++
Sbjct: 68 KHKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIK 127
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+++ GAKGCE+I+SGKL+ QRAK+MKFK GYM+ +GQP N+YID AVRHV +QG++G+
Sbjct: 128 SVIQDGAKGCEIIISGKLKQQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGV 187
Query: 185 KVKIMLSWDPN--GKQGPTTPLPDLVTIHSPK---DEEE 218
KVKIML ++PN K G TP+PD V IH PK D++E
Sbjct: 188 KVKIMLPYEPNPAKKFGVKTPIPDNVIIHPPKQITDDKE 226
>gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
Length = 194
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 117/155 (75%), Positives = 129/155 (83%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRRACYGVLRFIM
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLGIKVK
Sbjct: 61 ESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKVK 120
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IM DP+GK GP LPD VTI K+E+ +P
Sbjct: 121 IMRGSDPDGKAGPQKTLPDAVTIIESKEEQPVTQP 155
>gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 202
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/179 (67%), Positives = 145/179 (81%)
Query: 38 EVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLC 97
+VR + TE+II AT+TQ+VLGE RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL
Sbjct: 12 KVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLS 71
Query: 98 AIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYM 157
AIAQAESLRYKL GL VR+ACYG+LRFIMESGA+G EVIVSGK++ QRAK+MKF DG M
Sbjct: 72 AIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKGQRAKAMKFCDGLM 131
Query: 158 VSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
+ SG PVN Y+D AVRHV L QG+LGIKVKIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 132 IHSGDPVNYYVDKAVRHVQLPQGILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAAKEE 190
>gi|90076128|dbj|BAE87744.1| unnamed protein product [Macaca fascicularis]
gi|90076700|dbj|BAE88030.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 242 bits (618), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 122/133 (91%), Positives = 124/133 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVLRFIMESGAKG 133
GVLRFIMESGAKG
Sbjct: 121 GVLRFIMESGAKG 133
>gi|444731980|gb|ELW72307.1| Calcium-binding protein 39-like protein [Tupaia chinensis]
Length = 518
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 155/213 (72%), Gaps = 7/213 (3%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
+ K+KF ADG+F AELNE TRELAED SG+EVRVTP RTEII+ ATRTQNVLGEKG R
Sbjct: 109 TSKKKFDADGIFKAELNEFRTRELAEDRCSGLEVRVTPTRTEIIVLATRTQNVLGEKGPR 168
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR----ACYG 121
I+E T+V+ KR FPE SVELYAEKV RGLCAIAQAESLRY+LL GLA RR AC
Sbjct: 169 IQESTAVIPKRSGFPEGSVELYAEKVATRGLCAIAQAESLRYRLLEGLAGRRPATCACCA 228
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VL F +SGA GCE +VS K R QRAK+++F DG ++ SG VN Y+D+ VRHVLLR+
Sbjct: 229 VLWFFTDSGATGCEAVVSQKRRGQRAKALRFVDGLVIDSGDRVNYYVDTNVRHVLLRRCA 288
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPK 214
G + + +WDP+ + TP P +T +P+
Sbjct: 289 -GHQGEDRAAWDPSVRLALRTPCP--ITYEAPQ 318
>gi|379072592|gb|AFC92928.1| ribosomal protein S3B, partial [Hymenochirus curtipes]
Length = 152
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/151 (76%), Positives = 124/151 (82%), Gaps = 10/151 (6%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQA LAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQA----------LAVRRACYGVLRF 50
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRAK+MKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 51 IMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 110
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
VKIML WDP+GK GP PLPD V+I PK+E
Sbjct: 111 VKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 141
>gi|441645490|ref|XP_003254540.2| PREDICTED: 40S ribosomal protein S3 [Nomascus leucogenys]
Length = 181
Score = 232 bits (592), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 111/138 (80%), Positives = 119/138 (86%)
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+P ++LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+V
Sbjct: 17 YPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVV 76
Query: 139 SGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQ 198
SGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK
Sbjct: 77 SGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKI 136
Query: 199 GPTTPLPDLVTIHSPKDE 216
GP PLPD V+I PKDE
Sbjct: 137 GPKKPLPDHVSIVEPKDE 154
>gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus]
Length = 135
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/127 (88%), Positives = 117/127 (92%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 8 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 67
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 173
AVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVR
Sbjct: 68 AVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVR 127
Query: 174 HVLLRQG 180
HVLLRQG
Sbjct: 128 HVLLRQG 134
>gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens]
Length = 158
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 110/131 (83%), Positives = 115/131 (87%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLP 205
RAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLP
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 206 DLVTIHSPKDE 216
D V+I PKDE
Sbjct: 121 DHVSIVEPKDE 131
>gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 165
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 108/137 (78%), Positives = 116/137 (84%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
+YAEKV RGLCA AQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 1 MYAEKVATRGLCATAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLP 205
RAKSMKF DG M+ SG P NEY+D+A RHVLLRQGVLGIKVKIML WDPNGK GP PLP
Sbjct: 61 RAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPLP 120
Query: 206 DLVTIHSPKDEEEYVKP 222
D V++ PKDE Y P
Sbjct: 121 DNVSVVEPKDEIMYSTP 137
>gi|403340419|gb|EJY69494.1| 40S ribosomal protein S3 [Oxytricha trifallax]
Length = 243
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 162/225 (72%), Gaps = 7/225 (3%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+I+ K+KFVADGVF AELNE LTR L DGY+G+EVR T M TEI ++AT+T+ +L +
Sbjct: 11 KINTKKKFVADGVFQAELNEFLTRCLGMDGYAGIEVRATSMSTEIRVKATKTREILEKSA 70
Query: 64 RRIRELTSVVQKRFKFPE--NSVELYAEKV-NNRGLCAIAQAESLRYKLLGGLAVRRACY 120
R++REL S+++KR+ F + N VEL + + ++ LCA AQAE+L+YKLLGG VR A
Sbjct: 71 RKVRELKSLIEKRYNFNDVDNKVELAIKPLPYDKNLCAAAQAENLKYKLLGGTPVRLAAN 130
Query: 121 GVLRFIME-SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
+L +M+ GAKGCE+I+SGK+R QRAKS K+K GY++S+GQP E++D AVRHV LRQ
Sbjct: 131 NILAQVMKRGGAKGCEIIISGKIRGQRAKSQKYKQGYIISTGQPKLEFVDEAVRHVELRQ 190
Query: 180 GVLGIKVKIMLSWDPN-GKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
GVLG+KVKI+ + GK +PD V IH PKD+ + PT
Sbjct: 191 GVLGVKVKILPDTERAVGKYRKI--MPDYVKIHEPKDDHHDITPT 233
>gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
Length = 216
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 153/214 (71%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A + +K R+ + G+F+AELNE+LTREL ++GY G EVR TP RTEIII+A T+ +
Sbjct: 3 AQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDN 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
GRR++E+ ++QKR++ E+S+E++ +++ +GL A+ Q ESLRYKL+ + RRA Y
Sbjct: 63 HGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYS 122
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
++RF+M++GA+GCEV +SGKLR RA + K+K+GYMV SG +++ AV H+ ++Q
Sbjct: 123 IIRFVMDAGARGCEVAISGKLRGARASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQAT 182
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
+GI+V IML+ DP+G GP PD++ +H KD
Sbjct: 183 IGIRVLIMLAQDPSGISGPKESQPDVIKVHEAKD 216
>gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus]
Length = 157
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/135 (80%), Positives = 115/135 (85%)
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRA 147
AEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRA
Sbjct: 1 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRA 60
Query: 148 KSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDL 207
KSMKF DG M+ SG P NEY+D+A RHVLLRQGVLGIKVKIML WDPNGK GP PLPD
Sbjct: 61 KSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPLPDN 120
Query: 208 VTIHSPKDEEEYVKP 222
V++ PKDE Y P
Sbjct: 121 VSVVEPKDEIMYSTP 135
>gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii]
Length = 250
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/131 (81%), Positives = 115/131 (87%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LYAEKV RGLCAIAQ ESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR Q
Sbjct: 71 LYAEKVAARGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 130
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLP 205
RAKSMKF DG M+ SG PVN+Y+D+AVRHV+LRQGVLGIKVKIML WDP GK GP PLP
Sbjct: 131 RAKSMKFVDGLMIHSGNPVNDYVDTAVRHVMLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 190
Query: 206 DLVTIHSPKDE 216
D V+I PKD+
Sbjct: 191 DHVSIVEPKDD 201
>gi|41057930|gb|AAR98922.1| ribosomal protein S3, partial [Ostrinia nubilalis]
gi|441415027|dbj|BAM74497.1| ribosomal protein S3, partial [Ostrinia scapulalis]
Length = 125
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/124 (89%), Positives = 116/124 (93%)
Query: 29 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
EKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAK
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAK 120
Query: 149 SMKF 152
SMKF
Sbjct: 121 SMKF 124
>gi|226508400|ref|NP_001142180.1| uncharacterized protein LOC100274348 [Zea mays]
gi|194707500|gb|ACF87834.1| unknown [Zea mays]
gi|413921204|gb|AFW61136.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 133
Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 112/124 (90%), Positives = 118/124 (95%), Gaps = 2/124 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR Y
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR--Y 118
Query: 121 GVLR 124
++R
Sbjct: 119 NLIR 122
>gi|3642663|gb|AAC36521.1| ribosomal protein S3, partial [Mus musculus]
Length = 123
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/123 (87%), Positives = 113/123 (91%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRF
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 61 IMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 120
Query: 186 VKI 188
VKI
Sbjct: 121 VKI 123
>gi|223947579|gb|ACN27873.1| unknown [Zea mays]
gi|413917292|gb|AFW57224.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 127
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/117 (94%), Positives = 114/117 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 150/207 (72%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TP++T+I I+A T V G
Sbjct: 4 ARQMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGP 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
+GR++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR A
Sbjct: 64 EGRKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANA 123
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VL+ IM GA G E I+SGKL QRAKSMK++ GY++S+GQP + ID AVRH +QG+
Sbjct: 124 VLKQIMADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGI 183
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLV 208
+G+KVKI +DP+GK+G +PD V
Sbjct: 184 IGVKVKIYRPYDPSGKKGIPIEVPDKV 210
>gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus]
Length = 158
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/131 (77%), Positives = 113/131 (86%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQ 145
LY EKV NRGLCAIAQAESLR+KL+GGLAVRRACYGVLR+IME GAKGCEV+VSGKLR Q
Sbjct: 2 LYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKLRGQ 61
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLP 205
RAKSMKF DG M+ SG P N+Y+D+A RHVLLRQGVLGIKVKIML WDP GK GP PLP
Sbjct: 62 RAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIMLPWDPTGKTGPKRPLP 121
Query: 206 DLVTIHSPKDE 216
D V++ PK+E
Sbjct: 122 DNVSVVEPKEE 132
>gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 149/205 (72%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TP++T+I I+A T V G +G
Sbjct: 6 QMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
R++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR A VL
Sbjct: 66 RKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVL 125
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
+ IM GA G E I+SGKL QRAKSMK++ GY++S+GQP + ID AVRH +QG++G
Sbjct: 126 KQIMADGAIGAECIISGKLGQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIG 185
Query: 184 IKVKIMLSWDPNGKQGPTTPLPDLV 208
+KVKI +DP+GK+G +PD V
Sbjct: 186 VKVKIYRPYDPSGKKGIPIEVPDKV 210
>gi|443917610|gb|ELU38287.1| 40S ribosomal protein S3 [Rhizoctonia solani AG-1 IA]
Length = 592
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 126/282 (44%), Positives = 160/282 (56%), Gaps = 48/282 (17%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEI-----IIRATRT 55
MA+QISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTE+ + A+
Sbjct: 285 MASQISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEVSLSPETLYASGF 344
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVN--------NRGLCAIAQAESLRY 107
N G R+ + +V K + ++ + +++ R +C + + ++ +
Sbjct: 345 PNARLNFGNRLSSVR-LVPKMYSVKRDAGSGSSRRLSKSGSSSPKTRSICMLKRCRAVVF 403
Query: 108 KLL----------------------------------GGLAVRRACYGVLRFIMESGAKG 133
+LL G ++ ACYGVLRF+MESGAKG
Sbjct: 404 RLLRSASRCGTSYWVDSLFVGEFDSSFGCARGVGADSPGGNLKSACYGVLRFVMESGAKG 463
Query: 134 CEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWD 193
CEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHVLLRQGVLGIKVKIM WD
Sbjct: 464 CEVVVSGKLRAARAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKVKIMKGWD 523
Query: 194 PNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
P G GP PLPD VTI P ++ +PT PI
Sbjct: 524 PTGNLGPKKPLPDTVTIQEPPIDKVVAEPTSEHAGAAEPISA 565
>gi|393905485|gb|EJD73988.1| 40S ribosomal protein S3, variant [Loa loa]
Length = 183
Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 109/140 (77%), Positives = 120/140 (85%), Gaps = 3/140 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRRACYGVL
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVL 126
Query: 124 RFIMESGAKGCEVIVSGKLR 143
RFIMES A+GCE+ GK R
Sbjct: 127 RFIMESNAQGCEI---GKWR 143
>gi|351707112|gb|EHB10031.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 127
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 108/125 (86%), Positives = 112/125 (89%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAV RACYGVL F
Sbjct: 2 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVLRACYGVLWF 61
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
IMESGAKGCEV VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIK
Sbjct: 62 IMESGAKGCEVFVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 121
Query: 186 VKIML 190
VKIML
Sbjct: 122 VKIML 126
>gi|159145672|gb|ABW90373.1| putative ribosomal protein S3 [Sipunculus nudus]
Length = 126
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/126 (84%), Positives = 113/126 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADG+F AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQ VLG
Sbjct: 1 MATQVSKKRKFVADGLFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KGRRIRELTSVVQKRF FPE +VELY +KV NRGLCAI Q ESLRYKL+GGLAV RACY
Sbjct: 61 DKGRRIRELTSVVQKRFNFPEGTVELYVQKVANRGLCAITQCESLRYKLIGGLAVTRACY 120
Query: 121 GVLRFI 126
GVLRFI
Sbjct: 121 GVLRFI 126
>gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO]
Length = 184
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/165 (63%), Positives = 134/165 (81%), Gaps = 4/165 (2%)
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA Y
Sbjct: 5 KNGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 64
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQG
Sbjct: 65 GVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQG 124
Query: 181 VLGIKVKIMLSWDP-NGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
VLGIKVKIM DP + GP LPD VTI PK+EE + P++
Sbjct: 125 VLGIKVKIMR--DPAKSRTGPKA-LPDAVTIIEPKEEEPILAPSV 166
>gi|426369813|ref|XP_004051878.1| PREDICTED: 40S ribosomal protein S3 isoform 5 [Gorilla gorilla
gorilla]
Length = 154
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 103/124 (83%), Positives = 109/124 (87%)
Query: 93 NRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKF 152
+ GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF
Sbjct: 4 HLGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKF 63
Query: 153 KDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHS 212
DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I
Sbjct: 64 VDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVE 123
Query: 213 PKDE 216
PKDE
Sbjct: 124 PKDE 127
>gi|407844367|gb|EKG01924.1| 40S ribosomal protein S3, putative, partial [Trypanosoma cruzi]
Length = 160
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/157 (64%), Positives = 128/157 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRRA G++R
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSG 161
+MESGAKGCEV V GK++ QRAKSM F+DGYM+ SG
Sbjct: 124 HVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSG 160
>gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata]
Length = 126
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 103/126 (81%), Positives = 112/126 (88%)
Query: 43 PMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
P RTEIII ATRTQNVLGE+GRRIRELTS+VQKRF F + +VELYAEKV RGLCAIAQA
Sbjct: 1 PARTEIIILATRTQNVLGEEGRRIRELTSLVQKRFGFADGTVELYAEKVAQRGLCAIAQA 60
Query: 103 ESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQ 162
ESLRYKL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+
Sbjct: 61 ESLRYKLVGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGE 120
Query: 163 PVNEYI 168
P Y+
Sbjct: 121 PRRHYV 126
>gi|410039268|ref|XP_003950581.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like [Pan
troglodytes]
Length = 238
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 121/217 (55%), Positives = 145/217 (66%), Gaps = 8/217 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M QISKKRKFV DG+ EL + TRELAEDGYSGVEV++ RTEIII AT+TQNVLG
Sbjct: 1 MGVQISKKRKFVTDGILKVELKKFXTRELAEDGYSGVEVQIMSTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKG +I++L +VVQKR PE SVEL+A KV RG+C A ES Y LLGGLA +RAC
Sbjct: 61 EKGWQIQKLPAVVQKRSGXPEGSVELFAGKVATRGMCVFAXVESQCY-LLGGLAAQRACC 119
Query: 121 GVLRFIMES-GAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
GVL FI GA G + +VS + +K KF D M+ S V ID+A+ VLL+Q
Sbjct: 120 GVLWFIRRGXGATGFKAVVS-----ENSKCRKFVDDLMILSRNSVY-LIDTAMCQVLLQQ 173
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
GVL IK K+ML WDP GK LP+ ++I PKDE
Sbjct: 174 GVLAIKXKVMLPWDPAGKTDSRKALPEHMSIVEPKDE 210
>gi|308802702|ref|XP_003078664.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
gi|116057117|emb|CAL51544.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
Length = 120
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/117 (89%), Positives = 110/117 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTPMRTEIIIRATRT NVLG
Sbjct: 1 MATNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTANVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT++VQ+RF F E +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTTLVQRRFGFAEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRR 117
>gi|149068846|gb|EDM18398.1| rCG40478, isoform CRA_h [Rattus norvegicus]
Length = 151
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/117 (90%), Positives = 108/117 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|432099483|gb|ELK28641.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 165
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/167 (65%), Positives = 129/167 (77%), Gaps = 5/167 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA +ISKKRK VADG+F AELN+ LT+ELAEDGYSGVE++VTP +TEIII ATR QNVL
Sbjct: 1 MAVKISKKRKLVADGIFKAELNKFLTQELAEDGYSGVEIQVTPTKTEIIIWATRMQNVLS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGL--CAIAQAESLRYKLLGGLAVRRA 118
E G+++ ELT++VQKRF E SV+ Y E V +GL CA AQAESL YKLLGGLA+ A
Sbjct: 61 ETGQQLWELTAMVQKRFGNSEGSVDFYDETVATKGLLVCATAQAESLHYKLLGGLAMLWA 120
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVN 165
Y +L+FIMES AKGC+V+VS K QRAKSMKF +G M G PVN
Sbjct: 121 FYSMLQFIMESRAKGCKVMVSEKHLGQRAKSMKFVNGLM---GDPVN 164
>gi|410040211|ref|XP_003950757.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040213|ref|XP_003950758.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040215|ref|XP_003950759.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
Length = 122
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/122 (85%), Positives = 110/122 (90%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+NE LT+ELAEDGYSGVE+RVTP RTEIII ATRTQNVLGEKG RIRELT+VVQKRF P
Sbjct: 1 MNEFLTQELAEDGYSGVEMRVTPTRTEIIILATRTQNVLGEKGWRIRELTAVVQKRFGSP 60
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
E SVELYAEKV RGLCAIAQAESL YKLLGGLAVRRACYG L FIME+GAKGCEV+VSG
Sbjct: 61 EGSVELYAEKVATRGLCAIAQAESLPYKLLGGLAVRRACYGALWFIMETGAKGCEVVVSG 120
Query: 141 KL 142
KL
Sbjct: 121 KL 122
>gi|395833096|ref|XP_003789581.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Otolemur
garnettii]
gi|395833098|ref|XP_003789582.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Otolemur
garnettii]
Length = 123
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/123 (86%), Positives = 110/123 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVAD +F AELNE LTRE+AEDGYSGVEVRVTP RT III ATRT+NVLG
Sbjct: 1 MAVQISKKRKFVADDIFKAELNEFLTREVAEDGYSGVEVRVTPTRTAIIILATRTRNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGR IRELT+VVQKRF FPE SVELYAEK RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61 EKGRCIRELTAVVQKRFGFPEGSVELYAEKGATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 GVL 123
GVL
Sbjct: 121 GVL 123
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/209 (56%), Positives = 130/209 (62%), Gaps = 64/209 (30%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTPM TEIIIRAT+T NVLGEKG+
Sbjct: 1 MSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+I+ELTS LLGGLA+
Sbjct: 61 KIKELTS-------------------------------------LLGGLAM--------- 74
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
L AQRAKSMKFKDGY++SSGQPV +YID AVRHVL RQGVLGI
Sbjct: 75 -----------------LCAQRAKSMKFKDGYLISSGQPVKDYIDLAVRHVL-RQGVLGI 116
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
KVKIM +WDP GKQ TTPLPDLVTI +P
Sbjct: 117 KVKIMFNWDPKGKQSLTTPLPDLVTIQTP 145
>gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens]
Length = 133
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 106/121 (87%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM
Sbjct: 12 ELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 71
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGV V
Sbjct: 72 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVWDTSVH 131
Query: 188 I 188
+
Sbjct: 132 L 132
>gi|440906791|gb|ELR57014.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 220
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 127/196 (64%), Gaps = 28/196 (14%)
Query: 1 MATQISK-KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
MA QISK + F DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT+N L
Sbjct: 1 MAVQISKIESVFEEDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTENAL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G++G RI+E T VVQKR FPE +V LYAEKV LCAI QAESL Y+L GGL V RA
Sbjct: 61 GKEGWRIQEFTVVVQKRCGFPECTVALYAEKVATGNLCAIVQAESLHYRLPGGLTVPRAY 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
YG LRFIM G S PVN Y+D++ RHVLLRQ
Sbjct: 121 YGELRFIM---------------------------GPKAVSEDPVNYYVDTSARHVLLRQ 153
Query: 180 GVLGIKVKIMLSWDPN 195
GVLGIKVK + PN
Sbjct: 154 GVLGIKVKDHAALGPN 169
>gi|149391165|gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 94/106 (88%), Positives = 99/106 (93%)
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
GVLRF+MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQG
Sbjct: 1 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 60
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 226
VLGIKVKIML WDP GK GPTTPLPDLVTIH+PK+EEE P L+A
Sbjct: 61 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEEEELRPPVLIA 106
>gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus]
Length = 111
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/111 (87%), Positives = 101/111 (90%)
Query: 36 GVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
GVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV RG
Sbjct: 1 GVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFDFAPGTVELYAEKVATRG 60
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQR 146
LCAIAQAESLR KL+GGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QR
Sbjct: 61 LCAIAQAESLRCKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQR 111
>gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 140/207 (67%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G++ +E+R+ +II++ + +GEK R+++
Sbjct: 19 KRFMKNGLMNAELKEFFEKALVNEGFNTMELRMQETPIKIILKVAKPHEAIGEKKYRLKQ 78
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RR+ L+ +
Sbjct: 79 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKMLGGVQYRRSVNMALKAVRH 138
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA+GC++IVSGKL+ QRAKS+KF+DG ++ SG PV +YID+ V +QGV+GI+V+I
Sbjct: 139 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNPVKDYIDTGYATVETKQGVIGIQVRI 198
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKD 215
ML +DP G GP+ PLPD +TI P +
Sbjct: 199 MLPYDPEGVLGPSYPLPDRITILEPNE 225
>gi|384494103|gb|EIE84594.1| 40S ribosomal protein [Rhizopus delemar RA 99-880]
Length = 131
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/119 (81%), Positives = 106/119 (89%), Gaps = 1/119 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 61
A QISKKRK VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGE
Sbjct: 3 AVQISKKRK-VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGE 61
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLA CY
Sbjct: 62 KGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLACLLRCY 120
>gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|360045524|emb|CCD83072.1| putative 40s ribosomal protein S3 [Schistosoma mansoni]
Length = 152
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/150 (62%), Positives = 118/150 (78%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
EL+E L RELA+DGYS +VR + TE+II AT+TQ+VLGE RIREL SV+QKRF F
Sbjct: 3 ELDEFLKRELADDGYSASQVRESRKYTEVIILATKTQSVLGEDSLRIRELASVLQKRFGF 62
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ ++ L+ +K+ RGL AIAQAESLRYKL GL VR+ACYG+LRFI+ESGA+G VIVS
Sbjct: 63 SDCALGLFVDKMIFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIIESGARGVGVIVS 122
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYID 169
GK++ QRAK+MKF +G ++ SG PVN YID
Sbjct: 123 GKIKDQRAKAMKFCNGLIIHSGDPVNNYID 152
>gi|396082067|gb|AFN83679.1| 40S ribosomal protein S3 [Encephalitozoon romaleae SJ-2008]
Length = 216
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 138/209 (66%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKVLVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKLRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+
Sbjct: 68 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKATRH 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA+GC++IVSGKL+ QRAKS+KF+DG ++ SG V +YI++ V +QGV+GI+V+I
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVKDYINTGYATVETKQGVIGIQVRI 187
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
ML +DP G GP PLPD +TI P + +
Sbjct: 188 MLPYDPEGVIGPNYPLPDRITILEPTETQ 216
>gi|401828611|ref|XP_003888019.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
gi|392999027|gb|AFM99038.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
Length = 216
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 138/209 (66%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKIRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+
Sbjct: 68 FQHLVAQRLEVPDENVEIVVEKVHEKGLCALIQANFIREKMLGGVQYRRAVNMALKATRH 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA+GC++IVSGKL+ QRAKS+KF+DG ++ SG VN+YI++ V +QG++GI+V+I
Sbjct: 128 SGAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGNAVNDYINTGYATVETKQGIIGIQVRI 187
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
ML DP G GP+ LPD +TI P + +
Sbjct: 188 MLPHDPEGVIGPSYALPDRITILEPSETQ 216
>gi|224034403|gb|ACN36277.1| unknown [Zea mays]
gi|413917293|gb|AFW57225.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
gi|413917294|gb|AFW57226.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 103
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/103 (84%), Positives = 92/103 (89%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVNEYIDSAVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDI 229
KIML WDP GK GP TPLPDLVTIH+PKDE+E P L ++
Sbjct: 61 KIMLDWDPKGKVGPITPLPDLVTIHTPKDEDEPRPPVLAPPEV 103
>gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1]
gi|51701889|sp|Q8SQM3.1|RS3_ENCCU RecName: Full=40S ribosomal protein S3
gi|449330262|gb|AGE96522.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi]
Length = 228
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 134/206 (65%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ +
Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 140
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
A+GC++IVSGKL+ QRAKS+KF+DG ++ SG V +YI++ V +QGV+GI+V+IM
Sbjct: 141 KAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIM 200
Query: 190 LSWDPNGKQGPTTPLPDLVTIHSPKD 215
L +DP G GP PLPD +TI P +
Sbjct: 201 LPYDPEGVLGPNYPLPDRITILEPSE 226
>gi|392513001|emb|CAD27095.2| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1]
Length = 216
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 134/206 (65%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 9 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 68
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ +
Sbjct: 69 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 128
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
A+GC++IVSGKL+ QRAKS+KF+DG ++ SG V +YI++ V +QGV+GI+V+IM
Sbjct: 129 KAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIM 188
Query: 190 LSWDPNGKQGPTTPLPDLVTIHSPKD 215
L +DP G GP PLPD +TI P +
Sbjct: 189 LPYDPEGVLGPNYPLPDRITILEPSE 214
>gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 138
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 101/123 (82%)
Query: 94 RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFK 153
RGL AIAQAESLRYKL GL VR+ACYG+LRFIMESGA+G EVIVSGK++ QRAK+MKF
Sbjct: 4 RGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKGQRAKAMKFC 63
Query: 154 DGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
DG M+ SG PVN Y+D AVRHV L QG+LGIKVKIM+ D +GK+GP PLPD VTI +
Sbjct: 64 DGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIMMDHDSSGKKGPRKPLPDTVTILAA 123
Query: 214 KDE 216
K+E
Sbjct: 124 KEE 126
>gi|395539389|ref|XP_003771653.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like
[Sarcophilus harrisii]
Length = 361
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 131/216 (60%), Gaps = 36/216 (16%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M QI+KKR F ADG+F E E LTR++AEDGYSGV P RTEII+ ATRT +LG
Sbjct: 1 MVVQIAKKRNFAADGIFKPEX-EFLTRKVAEDGYSGVRY---PTRTEIILLATRT--LLG 54
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ LT VVQK F FPE + A SL YKLLGGLAV RAC
Sbjct: 55 HX--KFVNLTPVVQK-FGFPE------------------SNATSLCYKLLGGLAVCRACC 93
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
G E G KGCE+++SGKLR QRAKSMKF D M+ SG P+N YID AV +
Sbjct: 94 G------EWG-KGCEMVMSGKLRGQRAKSMKFVDVLMIQSGDPLNHYIDIAVHSS--NRV 144
Query: 181 VLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
+KVKIML WDPN K GP LPDLV+I PKDE
Sbjct: 145 CWELKVKIMLLWDPNSKIGPKNSLPDLVSIVKPKDE 180
>gi|402466373|gb|EJW01879.1| ribosomal protein S3 [Edhazardia aedis USNM 41457]
Length = 227
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 130/213 (61%), Gaps = 1/213 (0%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATR-TQNVLGEKGR 64
S +F+ +G+ +AELNE T+E DGY+G E+ + I ++ ++ T V+G
Sbjct: 11 STVNRFIKNGLIYAELNEYFTKEFYADGYAGCEIFHNSIPMRIYLKVSKPTAEVIGTNKC 70
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
RI+++ S++ KR +N V++ E + +GLC QA ++ +LL +VRRA Y +R
Sbjct: 71 RIKQVRSLIAKRLGMADNDVDILVEMIKKKGLCPFTQAVNIAQRLLVNASVRRAVYSSIR 130
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
E GA+G EVIVSGK + QRA+S KF DG M+ SGQP +Y+ + V +RQGV+GI
Sbjct: 131 AAKEEGAQGIEVIVSGKTKGQRARSTKFIDGLMIHSGQPAKDYVKTGFTAVEMRQGVIGI 190
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
KVKIML +DP G GP + D V + PKD E
Sbjct: 191 KVKIMLPYDPEGIIGPNKVMADKVIVFEPKDSE 223
>gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae]
Length = 216
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 132/203 (65%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
+ G+ AEL+E + EL E+GY G+++++ M +I IR + ++V+G+K R+ +
Sbjct: 12 IQKGLMHAELDEFFSIELKEEGYGGMDIKLHEMPVQITIRVNKPEDVMGDKKSRLNLIKH 71
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
++ +RF + VE+ E + N+GLC + QA+ +R KL G+ RRA + ++ I + GA
Sbjct: 72 LLMQRFPLLSSGVEINVEMIKNKGLCPMTQADFIRVKLFSGIPFRRAVHAAMKSIKDGGA 131
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
+GC +I+SGKL+ QRAKS+K++ G M+ +G ++ A+ VLL+QGV+GIKVKIML
Sbjct: 132 QGCVIIISGKLKGQRAKSVKYQQGLMIHTGNDRKLFVKEAISTVLLKQGVIGIKVKIMLP 191
Query: 192 WDPNGKQGPTTPLPDLVTIHSPK 214
+DP G GP+ + D +TI PK
Sbjct: 192 YDPTGINGPSREICDKITIFEPK 214
>gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 157
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 82/117 (70%), Positives = 99/117 (84%)
Query: 100 AQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVS 159
AQAESLRYKLLGGL VRRA YGVLRF+ME+GAKG EV VSGKLRAQRAK MKF DGY++S
Sbjct: 1 AQAESLRYKLLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLRAQRAKVMKFADGYLLS 60
Query: 160 SGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
+G P Y+D A+R+V +RQG+LGI+VKIM+++DP GK GP T LPD +TIH PK++
Sbjct: 61 TGTPKEMYVDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKED 117
>gi|4680363|gb|AAD27643.1|AF133129_1 ribosomal protein S3 [Meriones unguiculatus]
Length = 128
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 88/101 (87%)
Query: 116 RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHV 175
RRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHV
Sbjct: 1 RRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHV 60
Query: 176 LLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
LLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 61 LLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 101
>gi|95116517|gb|ABF56171.1| 40S ribosomal protein S3 [Theobroma cacao]
Length = 86
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/86 (97%), Positives = 85/86 (98%)
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 1 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 60
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKLR 143
ACYGVLRFIMESGAKGCEV+VSG LR
Sbjct: 61 ACYGVLRFIMESGAKGCEVMVSGXLR 86
>gi|308802700|ref|XP_003078663.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
gi|116057116|emb|CAL51543.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
Length = 145
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 75/108 (69%), Positives = 90/108 (83%)
Query: 115 VRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRH 174
VR ACYGVLR+IMESGAKG EV+VSGKLR QRAK+MKFKDGYM+SSG PV +YI S RH
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 175 VLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LLRQG +G++VKIML DP G+ GP+TP+PD V IH+PK++E+ KP
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPDTVVIHTPKEDEDMAKP 137
>gi|149068843|gb|EDM18395.1| rCG40478, isoform CRA_e [Rattus norvegicus]
Length = 129
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/97 (87%), Positives = 87/97 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLC 97
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLW 97
>gi|148684440|gb|EDL16387.1| ribosomal protein S3, isoform CRA_b [Mus musculus]
Length = 129
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL ++ +G A R C
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLWPAMVCFGSLWR-VGPRAARLWCL 119
Query: 121 G 121
G
Sbjct: 120 G 120
>gi|347527|gb|AAA18095.1| ribosomal protein S3, partial [Homo sapiens]
Length = 95
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 86/95 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>gi|387594476|gb|EIJ89500.1| hypothetical protein NEQG_00270 [Nematocida parisii ERTm3]
gi|387596684|gb|EIJ94305.1| hypothetical protein NEPG_00972 [Nematocida parisii ERTm1]
Length = 244
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 127/211 (60%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
V G+ + ELNE+ ++ + DGY+G++ + EI ++ + +L + RI++L
Sbjct: 20 IVNQGLIYTELNEMFSKFMENDGYAGMDYKPYTSPIEITLKLGKPSGMLEDNKLRIKQLI 79
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
S++Q RF+ E SV ++ E+V NR L A QA+ ++ KL GL VRR G +R IME G
Sbjct: 80 SLIQMRFRLEEGSVSIFIEQVKNRALNAQIQADLIKEKLGAGLPVRRVVSGAIRTIMEGG 139
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
A G EVI+SGKL+ QRA+S K +G + SG +Y+ + +LL+QG+LGIKV I L
Sbjct: 140 ASGAEVIISGKLKGQRARSYKVSEGILKHSGNSTKDYVKKGMSSILLKQGILGIKVGITL 199
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
+DP GK G P VTI S ++ E+ K
Sbjct: 200 KYDPTGKVGTPVQHPSNVTIFSQEELEQMRK 230
>gi|315139154|gb|ADT80771.1| ribosomal protein S3 [Heliothis subflexa]
gi|315139156|gb|ADT80772.1| ribosomal protein S3 [Heliothis virescens]
Length = 126
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 86/107 (80%)
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVL 176
RACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVL
Sbjct: 1 RACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVL 60
Query: 177 LRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
LRQGVLGIKVKIML WD GK GP P PD + + PKDE ++PT
Sbjct: 61 LRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPT 107
>gi|323303371|gb|EGA57167.1| Rps3p [Saccharomyces cerevisiae FostersB]
Length = 136
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 97/120 (80%), Gaps = 2/120 (1%)
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPV 164
+++KLL GLA+RRA YGV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPV
Sbjct: 1 MKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPV 60
Query: 165 NEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 224
N++ID+A RHVL+RQGVLGIKVKIM DP + LPD VTI PK+EE + P++
Sbjct: 61 NDFIDTATRHVLMRQGVLGIKVKIM--RDPAKSRTGXKALPDAVTIIEPKEEEPILAPSV 118
>gi|410812263|gb|AFV81473.1| 40S ribosomal protein S3, partial [Scrobicularia plana]
Length = 113
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/101 (74%), Positives = 85/101 (84%)
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P+N+Y+D+AVRHVLLRQGV
Sbjct: 1 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGV 60
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
LGIKVKIML WDP+GK GP PLPD V+I PKD+ +P
Sbjct: 61 LGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDDPPPAQP 101
>gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
Length = 214
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 128/207 (61%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+KF+ADG+ FAEL E+ + L +G+S +E+R+ ++I++ + Q ++G+K +I +
Sbjct: 8 KKFIADGMIFAELKELFEKCLINEGFSSLELRLEESPVKVILKVVKPQELIGDKKWKIVQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ +V R P+++V + +KV +GLC + QA +R K+L + +RA VL+
Sbjct: 68 IQHLVASRLSLPDSNVVVIIDKVVEKGLCPVYQANLIREKMLANIPHKRAANLVLKNTKF 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA GC V +SGKL+ RA + KF +G ++ SGQP +Y+ + V +QGV+GI+V I
Sbjct: 128 AGATGCLVTISGKLKGLRACTKKFLEGVVIKSGQPSRDYVKKHITTVNTKQGVIGIQVSI 187
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKD 215
ML DP G GP+T LPD + + K+
Sbjct: 188 MLPHDPEGILGPSTLLPDKIVVLDAKE 214
>gi|170055465|ref|XP_001863594.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167875417|gb|EDS38800.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 278
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 108/193 (55%), Gaps = 47/193 (24%)
Query: 30 AEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAE 89
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT++VQK +
Sbjct: 73 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAIVQKLIR----------- 121
Query: 90 KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKS 149
+RRAC +ESGAKG EV+VSGKLR QRAKS
Sbjct: 122 ------------------------DLRRAC-------LESGAKGSEVVVSGKLRGQRAKS 150
Query: 150 MKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVT 209
MKF DG ++ S P NEY D+A RH+LLRQG KIML WDPNGK P PLP+ V
Sbjct: 151 MKFVDGMVIHSRDPCNEYSDTATRHILLRQG-----GKIMLPWDPNGKIDPKEPLPENVL 205
Query: 210 IHSPKDEEEYVKP 222
+ PKDE + P
Sbjct: 206 VVEPKDEIMHNTP 218
>gi|378756656|gb|EHY66680.1| hypothetical protein NERG_00320 [Nematocida sp. 1 ERTm2]
Length = 243
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 121/205 (59%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
V+ G+ + ELNE+ ++ + D Y+G++ + EI ++ + +L RI++L
Sbjct: 20 IVSQGMVYTELNEMFSKFMINDEYAGMDYKPYSSPIEITLKLGKPAGMLENNKLRIKQLI 79
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 130
+++Q RF+ E SV ++ E+V N+ L A QA +R K+ L VRRA G +R IME G
Sbjct: 80 TLIQMRFRLEEGSVSIFIEQVKNKALNAQIQANQIREKIGASLPVRRAVSGAIRTIMEGG 139
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
A G EVI+SGKL+ QRA+S K G M SG + +Y+ + +LL+QG+LGIKV I L
Sbjct: 140 AAGVEVIISGKLKGQRARSYKVVGGIMKHSGDSIKDYVKKGMSSILLKQGILGIKVAITL 199
Query: 191 SWDPNGKQGPTTPLPDLVTIHSPKD 215
DP GK G P VTI S ++
Sbjct: 200 KHDPTGKIGTAVQHPSSVTIFSQEE 224
>gi|426375157|ref|XP_004054412.1| PREDICTED: 40S ribosomal protein S3-like [Gorilla gorilla
gorilla]
Length = 110
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 82/92 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE G SGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEHGCSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVN 92
EKGRRIRELT+VVQKRF FPE SVELYAEK N
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKCN 92
>gi|440493994|gb|ELQ76410.1| 40S ribosomal protein S3 [Trachipleistophora hominis]
Length = 214
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 122/199 (61%), Gaps = 3/199 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ + +IIIR +T +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFGKELMESGYSSMKFLAHEVPLKIIIRVLKTDDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+V+KR K V + E V ++GLC QAE +R K+ GLA RRA G LR I E+GA
Sbjct: 74 LVKKRLK---KDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLAYRRAVNGALRTIKEAGA 130
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
+GC ++VSGKL+ QRA+S K + SG P EY+ V L+QGV+GI VKIML
Sbjct: 131 QGCIIVVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMRGGKSTVHLKQGVIGIIVKIMLP 190
Query: 192 WDPNGKQGPTTPLPDLVTI 210
DP G +GP + D + +
Sbjct: 191 HDPEGIRGPRREMVDKIRV 209
>gi|354477339|ref|XP_003500878.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 152
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/95 (74%), Positives = 80/95 (84%)
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
VLRF MESGA+GCEV+VSGKLR +RAKSMK DG M+ SG PVN Y+D+A+RHVLLRQGV
Sbjct: 31 VLRFTMESGAEGCEVVVSGKLRGERAKSMKLVDGLMIHSGDPVNYYVDTAIRHVLLRQGV 90
Query: 182 LGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
LGIKVKIML WDP+GK GP PLPD V+I PKDE
Sbjct: 91 LGIKVKIMLPWDPSGKIGPKKPLPDHVSIMEPKDE 125
>gi|429965063|gb|ELA47060.1| ribosomal protein S3 [Vavraia culicis 'floridensis']
Length = 214
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 121/204 (59%), Gaps = 3/204 (1%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ + +IIIR + +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFAKELMESGYSSMKFLAHEVPLKIIIRVLKADDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
+V+KR V + E V ++GLC QAE +R K+ GL RRA G LR I E+GA
Sbjct: 74 LVKKRL---NKDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLTYRRAVNGALRTIKEAGA 130
Query: 132 KGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
+GC +IVSGKL+ QRA+S K + SG P EY+ V L+QGV+GI VKIML
Sbjct: 131 QGCIIIVSGKLKGQRARSQKMMWQTNIYSGSPKEEYMREGKSTVHLKQGVIGIIVKIMLP 190
Query: 192 WDPNGKQGPTTPLPDLVTIHSPKD 215
DP G +GP + D + + K+
Sbjct: 191 HDPEGIRGPRREMVDKIRVLDVKE 214
>gi|149068842|gb|EDM18394.1| rCG40478, isoform CRA_d [Rattus norvegicus]
Length = 151
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 77/90 (85%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KIML WDP+GK GP PLPD V+I PKDE
Sbjct: 61 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 90
>gi|83595153|gb|ABC25034.1| ribosomal protein S3 [Hydra vulgaris]
Length = 119
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Query: 126 IMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
I+ESGAKGCEVIVSGKLR QRAKSMKF DG+M+ SG P+ EYID+AVRHV LRQGVLGIK
Sbjct: 6 ILESGAKGCEVIVSGKLRGQRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIK 65
Query: 186 VKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VKIML WDP GK GP PLPD V+I PK EE + PT
Sbjct: 66 VKIMLPWDPTGKTGPKKPLPDHVSIVEPK-EEVFYPPT 102
>gi|149068840|gb|EDM18392.1| rCG40478, isoform CRA_b [Rattus norvegicus]
gi|344246127|gb|EGW02231.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 117
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 77/90 (85%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KIML WDP+GK GP PLPD V+I PKDE
Sbjct: 61 KIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 90
>gi|386869506|ref|NP_001247436.1| 40S ribosomal protein S3 isoform 3 [Homo sapiens]
gi|426369805|ref|XP_004051874.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Gorilla gorilla
gorilla]
gi|426369807|ref|XP_004051875.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Gorilla gorilla
gorilla]
gi|426369811|ref|XP_004051877.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Gorilla gorilla
gorilla]
gi|426369815|ref|XP_004051879.1| PREDICTED: 40S ribosomal protein S3 isoform 6 [Gorilla gorilla
gorilla]
gi|21104402|dbj|BAB93471.1| IMR-90 ribosomal protein S3 [Homo sapiens]
Length = 117
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 76/90 (84%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KIML WDP GK GP PLPD V+I PKDE
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 90
>gi|149068851|gb|EDM18403.1| rCG40478, isoform CRA_m [Rattus norvegicus]
Length = 98
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis]
gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis]
Length = 214
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 122/207 (58%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+K +A+G+ +AE+ E + L +G+S V++R +I+++ + + GEK ++++
Sbjct: 8 KKVIANGILYAEIKEFCEKALIPEGFSSVDIRFDENPIKIVLKVVKPHELTGEKKFKLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L + R PE ++ + +KV +GLC + QA ++ K+L G+ +RA VLR
Sbjct: 68 LQHLFASRLNVPEMNINIIIDKVVEKGLCPVFQANLIKEKMLAGVQYKRAANLVLRNTKF 127
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA GC + +SGKL+ RA + KF +G ++ SGQP +Y+ V +QGV+G++V I
Sbjct: 128 AGATGCLITISGKLKGLRACTKKFLEGVVIKSGQPSKDYVKKYTTTVNTKQGVIGVQVSI 187
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKD 215
ML DP G GP+T LPD + + K+
Sbjct: 188 MLPHDPEGIIGPSTLLPDKIVVLDAKE 214
>gi|238613775|ref|XP_002398529.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
gi|215475235|gb|EEB99459.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
Length = 100
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/85 (87%), Positives = 78/85 (91%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
IIIRAT TQ VLGEKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRY
Sbjct: 1 IIIRATHTQEVLGEKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRY 60
Query: 108 KLLGGLAVRRACYGVLRFIMESGAK 132
KLL GLAVRRACYGVLRF+MESGAK
Sbjct: 61 KLLNGLAVRRACYGVLRFVMESGAK 85
>gi|405948172|gb|EKC17931.1| 40S ribosomal protein S3, partial [Crassostrea gigas]
Length = 112
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 77/89 (86%)
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P+N+Y+D+AVRHVLLRQGVLGIKVK
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKVK 60
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
IML WDP+GK GP PLPD V++ PKDE
Sbjct: 61 IMLPWDPSGKIGPKRPLPDHVSVVEPKDE 89
>gi|444729886|gb|ELW70289.1| 40S ribosomal protein S3-A [Tupaia chinensis]
Length = 174
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 84/100 (84%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
+K RKFV G+F AELNE LT+ELA+DGYSGVE RVTP RTEIII ATRTQNVLGEKG++
Sbjct: 75 AKNRKFVTYGIFKAELNEFLTQELAKDGYSGVEGRVTPTRTEIIILATRTQNVLGEKGQQ 134
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
RELT+V+QKRF FPE SVELYAEKV R L AI QAESL
Sbjct: 135 TRELTAVIQKRFGFPEGSVELYAEKVATRSLFAIVQAESL 174
>gi|149641402|ref|XP_001506205.1| PREDICTED: 40S ribosomal protein S3-A-like, partial
[Ornithorhynchus anatinus]
Length = 85
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 77/85 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVPISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|324105279|gb|ADY18402.1| ribosomal protein rps3 [Glycera tridactyla]
Length = 108
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/95 (71%), Positives = 80/95 (84%)
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P ++Y+D+AVRHVLLRQGVLGIKVK
Sbjct: 1 ESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTHDYVDTAVRHVLLRQGVLGIKVK 60
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IML WDP+GK GP PLPD ++I PK+EE +P
Sbjct: 61 IMLPWDPSGKIGPKHPLPDQISIVEPKEEEIPSQP 95
>gi|149391843|gb|ABR25845.1| 40S ribosomal protein S3-a [Oryza sativa Indica Group]
Length = 85
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/76 (86%), Positives = 70/76 (92%)
Query: 147 AKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPD 206
AKSMKFKDGYM+SSG PVN YIDSAVRHVLLRQGVLGIKVKIML WDP GKQGP TPLPD
Sbjct: 1 AKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPD 60
Query: 207 LVTIHSPKDEEEYVKP 222
LVTIH+PKDE+E+ KP
Sbjct: 61 LVTIHAPKDEDEFSKP 76
>gi|8247324|emb|CAB92940.1| putative 40S ribosomal protein S3 [Plasmodium falciparum 3D7]
Length = 110
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/105 (64%), Positives = 85/105 (80%)
Query: 112 GLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSA 171
GLAVRRACYGVLR IMESGAKGCEVIVSGKLRAQRAKSMKF+DGY++S+G+P ++++A
Sbjct: 2 GLAVRRACYGVLRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTA 61
Query: 172 VRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
R L+QGVLGIKVKIML + + G T+ LPD +++ PK +
Sbjct: 62 TRSAQLKQGVLGIKVKIMLPTAIDTRTGLTSILPDNISVLEPKTD 106
>gi|158187818|gb|ABW23198.1| ribosomal protein rps3 [Eurythoe complanata]
Length = 105
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 66/91 (72%), Positives = 74/91 (81%)
Query: 133 GCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSW 192
GCEV+VSGKLR QRAKSMKF DG M+ SG+P N+Y+D+AVRHVLLRQGVLGIKVKIML W
Sbjct: 1 GCEVVVSGKLRGQRAKSMKFVDGLMIHSGEPTNDYVDTAVRHVLLRQGVLGIKVKIMLPW 60
Query: 193 DPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
DP GK GP PLPD V+I PKDE +PT
Sbjct: 61 DPAGKIGPKRPLPDHVSIVEPKDETPPAQPT 91
>gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581]
Length = 217
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTADSICVIIQCAEPEIVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
++ RF + ++ +K+ RGL A ++LR KL + +RRA Y V+R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSVIRTAMRA 135
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
GA GCEVIV+GKLRAQRA++ KFK+G ++S+G P ++ A RH+ +RQGV+G+KV+I
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRI- 194
Query: 190 LSWDPNGKQGPTTPLPDLVTI 210
++PN + +PD + I
Sbjct: 195 --YNPNIR---GAVMPDKIEI 210
>gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15]
Length = 217
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 122/201 (60%), Gaps = 6/201 (2%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
++ RF + ++ +K+ RGL A ++LR KL + +RRA Y ++R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
GA GCEVIV+GKLRAQRA++ KFK+G ++S+G P ++ A RH+ +RQGV+G+KV+I
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKVRI- 194
Query: 190 LSWDPNGKQGPTTPLPDLVTI 210
++PN + +PD + I
Sbjct: 195 --YNPNIR---GAVMPDKIEI 210
>gi|170060068|ref|XP_001865639.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167878646|gb|EDS42029.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 179
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 99/206 (48%), Gaps = 53/206 (25%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
FF + LAEDG SGVEVRVTP RTE II A+ + RIREL +V+
Sbjct: 20 FFLRSGSSFSAWLAEDGLSGVEVRVTPTRTEFIIMASAPRTCSARSDHRIRELNAVI--- 76
Query: 77 FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
YGVLRFIMES AKG EV
Sbjct: 77 -------------------------------------------YGVLRFIMESCAKGYEV 93
Query: 137 IVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNG 196
+VSGKLR QRAKSM F DG M+ S P E LRQG LGI+VKI+L WDPNG
Sbjct: 94 VVSGKLRGQRAKSMTFVDGMMIHSDDPCKEATP-------LRQGELGIQVKIVLPWDPNG 146
Query: 197 KQGPTTPLPDLVTIHSPKDEEEYVKP 222
GP L D V + PKDE Y P
Sbjct: 147 NIGPKELLSDNVEMVEPKDEIMYNTP 172
>gi|440907841|gb|ELR57934.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 158
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 81/111 (72%), Gaps = 7/111 (6%)
Query: 109 LLGGLAV---RRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVN 165
+GGL V AC G R ++ K CEV+VSGKL+ QRAKSMKF DG M+ SG PVN
Sbjct: 25 FVGGLTVLGPALACCGSSRRVI----KDCEVVVSGKLQGQRAKSMKFVDGLMIHSGDPVN 80
Query: 166 EYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE
Sbjct: 81 YYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 131
>gi|28189751|dbj|BAC56490.1| similar to ribosomal protein S3 [Bos taurus]
Length = 77
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/77 (90%), Positives = 72/77 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRF 77
EKGRRIRELT+VVQKRF
Sbjct: 61 EKGRRIRELTAVVQKRF 77
>gi|195650699|gb|ACG44817.1| hypothetical protein [Zea mays]
gi|413917295|gb|AFW57227.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 80
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 69/80 (86%)
Query: 150 MKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVT 209
MKFKDGYM+SSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML WDP GK GP TPLPDLVT
Sbjct: 1 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPITPLPDLVT 60
Query: 210 IHSPKDEEEYVKPTLVATDI 229
IH+PKDE+E P L ++
Sbjct: 61 IHTPKDEDEPRPPVLAPPEV 80
>gi|242222173|ref|XP_002476815.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220723885|gb|EED77980.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 136
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/97 (67%), Positives = 76/97 (78%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGCEV+VSGKLRA RAKSMKF DG+M+ SGQP +++D AVRHV+LRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRAARAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
KIM WDP G+ GP PLPD V I P ++ +PT
Sbjct: 61 KIMKGWDPEGQVGPRKPLPDSVQILEPPLDKIVAEPT 97
>gi|159163349|pdb|1WH9|A Chain A, Solution Structure Of The Kh Domain Of Human Ribosomal
Protein S3
Length = 92
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/79 (88%), Positives = 71/79 (89%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKR
Sbjct: 8 FKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKR 67
Query: 77 FKFPENSVELYAEKVNNRG 95
F FPE SVELYAEKV RG
Sbjct: 68 FGFPEGSVELYAEKVATRG 86
>gi|119598703|gb|EAW78297.1| hCG2022018 [Homo sapiens]
Length = 117
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 72/90 (80%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGAKGC+V+ SGKLR QRAKSMKF DG + SG P+N Y+ +AV HVLLRQGVLGIKV
Sbjct: 1 MESGAKGCKVMASGKLRGQRAKSMKFVDGLTIHSGDPINYYVGTAVCHVLLRQGVLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KIML WDP GK GP PLPD V+I PKDE
Sbjct: 61 KIMLPWDPTGKTGPKKPLPDHVSIVEPKDE 90
>gi|149068841|gb|EDM18393.1| rCG40478, isoform CRA_c [Rattus norvegicus]
Length = 105
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/76 (90%), Positives = 71/76 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKR 76
EKGRRIRELT+VVQKR
Sbjct: 61 EKGRRIRELTAVVQKR 76
>gi|32400841|gb|AAP80652.1|AF479033_1 40S ribosomal protein [Triticum aestivum]
Length = 79
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 63/76 (82%), Positives = 68/76 (89%)
Query: 150 MKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVT 209
+KFKDGYM+SSGQPVNEYID+AVRHVLLRQGVLGIKVKIML WDP GK GPTTPLPDLVT
Sbjct: 2 VKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVT 61
Query: 210 IHSPKDEEEYVKPTLV 225
IH PK+E+E P LV
Sbjct: 62 IHPPKEEDELRPPALV 77
>gi|429961737|gb|ELA41282.1| hypothetical protein VICG_01655 [Vittaforma corneae ATCC 50505]
Length = 215
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 115/206 (55%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
RK++ +G+ AELNE+ + Y+G ++ +I I+ Q +GE ++ +
Sbjct: 7 RKYIQNGLIDAELNELFGKYFQAQIYAGSTIKHNQTPIKISIKVYNPQEAIGENKFKLLQ 66
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +++ +RF P N++++ EK+ +RGL AE LR L +R +++
Sbjct: 67 LQNMIGQRFDIPPNNIDIVFEKIADRGLEPAYHAEQLRLAFLQNKPYKRVINSIIKSSRA 126
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+G + V+GKL+ QRAK++K+ DGY + SG +Y+ SA +QG +G++V +
Sbjct: 127 AGAQGVMIRVAGKLKGQRAKAIKYFDGYFIQSGMAAKDYVRSAKSQAKCKQGTIGVQVSV 186
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPK 214
ML +DP G G T + D +TI PK
Sbjct: 187 MLPYDPEGVVGSNTIISDRITIIEPK 212
>gi|22759729|dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]
Length = 143
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/71 (88%), Positives = 63/71 (88%)
Query: 144 AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTP 203
AQRAKSMKFKDGYMVSSGQPV EYIDSAVRHVLLRQGVLGIKVKIML WDP GK GP TP
Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPTGKLGPKTP 60
Query: 204 LPDLVTIHSPK 214
LPD V IH PK
Sbjct: 61 LPDNVVIHMPK 71
>gi|148684441|gb|EDL16388.1| ribosomal protein S3, isoform CRA_c [Mus musculus]
Length = 97
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 77/98 (78%), Gaps = 6/98 (6%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA 98
EKGRRIRELT+VVQ P ++ +NR L A
Sbjct: 61 EKGRRIRELTAVVQNHQPCPSQCLQ------HNRVLAA 92
>gi|170052166|ref|XP_001862098.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167873123|gb|EDS36506.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 181
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 89/169 (52%), Gaps = 43/169 (25%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGE RIREL ++ L+AEKV R LCAI QAESL YKL+GGL
Sbjct: 27 RTQNVLGESDHRIRELNAI-------------LFAEKVATRSLCAIVQAESLCYKLIGGL 73
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 173
AV RACYG F DG + S P NE+ D+A R
Sbjct: 74 AVCRACYG------------------------------FVDGIIFHSDDPSNEFSDTASR 103
Query: 174 HVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
HVLLR G LG++VKIML WD NG GP L D V + PKD+ Y P
Sbjct: 104 HVLLRHGELGMQVKIMLPWDKNGNIGPKEQLSDNVEMVEPKDKIMYNTP 152
>gi|388501238|gb|AFK38685.1| unknown [Lotus japonicus]
Length = 78
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 68/77 (88%)
Query: 157 MVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
M+SSGQPV +YIDSAVRHVLLRQGVLGIKVKIML WDP GKQGP TPLPD+VTIH+PK+E
Sbjct: 1 MISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHTPKEE 60
Query: 217 EEYVKPTLVATDIEVPI 233
EEY ++A DIEVP+
Sbjct: 61 EEYRPVAVLANDIEVPV 77
>gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3]
gi|259495259|sp|C5A280.1|RS3_THEGJ RecName: Full=30S ribosomal protein S3
gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3]
Length = 209
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
IM P P LPD
Sbjct: 182 IM----P-----PDARLPD 191
>gi|223477921|ref|YP_002582383.1| 30S ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
gi|214033147|gb|EEB73975.1| SSU ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
Length = 209
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 112/199 (56%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
IM P LPD
Sbjct: 182 IM---------PPEARLPD 191
>gi|390960788|ref|YP_006424622.1| 30S ribosomal protein S3 [Thermococcus sp. CL1]
gi|390519096|gb|AFL94828.1| 30S ribosomal protein S3P [Thermococcus sp. CL1]
Length = 210
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAKLKLGVIGVKVS 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + + EEE
Sbjct: 182 IM---------PPDAKLPDEIEVLEKVQEEE 203
>gi|312137081|ref|YP_004004418.1| 30S ribosomal protein S3 [Methanothermus fervidus DSM 2088]
gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088]
Length = 217
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 119/215 (55%), Gaps = 11/215 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+++F+A+ + AE++E L +EL GY G+++++TP+ T I I A R V+G GR +R
Sbjct: 3 EKEFIAESLKRAEIDEFLEKELERAGYGGMDIQLTPLGTMITIYAERPGLVIGRGGRTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT++++KRF +E+ +V L A + L G+ RR YG LR IM
Sbjct: 63 RLTNILRKRFGLDNPQIEVKEVEVPE--LNPKIMAHRIASMLERGMHFRRVAYGTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGK+R RA S+KF +G++ G+P +++ + L+ GVLG+ VK
Sbjct: 121 AAGAQGAEITISGKIRGARATSVKFTEGHIKKCGEPAEKFVKTGFATAQLKPGVLGVHVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
IM P LPD + I +E KP
Sbjct: 181 IMP---------PGVKLPDEIKIKKEALKETESKP 206
>gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui]
Length = 304
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ D E+YV T
Sbjct: 179 RVKIIP---------PNAELPDDFEIYEDVDVEDYVADT 208
>gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3 [Pyrococcus horikoshii OT3]
gi|6647791|sp|O59424.1|RS3_PYRHO RecName: Full=30S ribosomal protein S3
gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus
horikoshii OT3]
Length = 210
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + I EEE
Sbjct: 182 IM---------PPDARLPDEIEIVEKPAEEE 203
>gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3 [Haloarcula marismortui ATCC 43049]
gi|448636981|ref|ZP_21675429.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|448648015|ref|ZP_21679493.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
gi|57015336|sp|P20281.2|RS3_HALMA RecName: Full=30S ribosomal protein S3; AltName: Full=HS1; AltName:
Full=HmaS3
gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
gi|445765287|gb|EMA16426.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|445775885|gb|EMA26880.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
Length = 304
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ D E+YV T
Sbjct: 179 RVKIIP---------PNAELPDDFEIYEDVDVEDYVADT 208
>gi|448681469|ref|ZP_21691560.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
gi|445767339|gb|EMA18442.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
Length = 305
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ D E+YV T
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADT 208
>gi|448630844|ref|ZP_21673299.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
gi|445755218|gb|EMA06608.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
Length = 304
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ D E+YV T
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADT 208
>gi|448685266|ref|ZP_21693258.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
gi|445781877|gb|EMA32728.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
Length = 310
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ D E+YV T
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADT 208
>gi|448671521|ref|ZP_21687426.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
gi|445764983|gb|EMA16123.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
Length = 305
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ D E+YV T
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADT 208
>gi|344212407|ref|YP_004796727.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
gi|343783762|gb|AEM57739.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
Length = 304
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +G+P E +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ D E+YV T
Sbjct: 179 RVKIIP---------PDAELPDDFEIYEDVDVEDYVADT 208
>gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 73/87 (83%)
Query: 39 VRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA 98
+++ EIII AT+TQNVLG+KGR+IRELTSVVQKRF+F EN+VELYAEK NNR A
Sbjct: 322 LQLRDFHMEIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYA 381
Query: 99 IAQAESLRYKLLGGLAVRRACYGVLRF 125
IAQAESLR+KLLGGL VRRA YGVL F
Sbjct: 382 IAQAESLRFKLLGGLVVRRAGYGVLSF 408
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 82/145 (56%), Gaps = 48/145 (33%)
Query: 46 TEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
TEIII AT+TQNVL +KG++IRELTSVVQKR
Sbjct: 110 TEIIIHATQTQNVLCKKGKKIRELTSVVQKR----------------------------- 140
Query: 106 RYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVN 165
F+MESG KGCEVI+SGKL Q AKS+KFKDGY++ SGQ V
Sbjct: 141 -------------------FVMESGTKGCEVIMSGKLCVQCAKSIKFKDGYLIFSGQLVK 181
Query: 166 EYIDSAVRHVLLRQGVLGIKVKIML 190
+YIDS VRHVLL+QG+L IK L
Sbjct: 182 DYIDSTVRHVLLKQGILSIKFVFYL 206
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPK 214
+LS+DP GKQGPTTPLP+LVTI +P
Sbjct: 405 VLSFDPKGKQGPTTPLPNLVTIQAPN 430
>gi|409096178|ref|ZP_11216202.1| 30S ribosomal protein S3P [Thermococcus zilligii AN1]
Length = 209
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 117/210 (55%), Gaps = 11/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GR+IR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAADPGYVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V++++F +E+ E++ N L A QA L L G+ RRA Y + IM
Sbjct: 64 DLTRVLERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIGAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + +L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQAVLKLGVIGVKVS 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
IM P P LPD + I +EE
Sbjct: 182 IM----P-----PDAKLPDEIGIKEIVEEE 202
>gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3 [Thermococcus kodakarensis KOD1]
gi|73918002|sp|Q5JDH5.1|RS3_PYRKO RecName: Full=30S ribosomal protein S3
gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1]
Length = 209
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVS 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
IM P LPD
Sbjct: 182 IM---------PPDAKLPD 191
>gi|341582057|ref|YP_004762549.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
gi|340809715|gb|AEK72872.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
Length = 210
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKENVRDMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERKFNLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYSAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + L+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQARLKLGVIGVKVS 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + + EEE
Sbjct: 182 IM---------PPDAKLPDEIEVIEKLVEEE 203
>gi|226476716|emb|CAX72250.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 102
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 72/90 (80%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
MESGA+G EVIVSGK++ QRAK+MKF DG M+ SG PVN Y+D AVRHV L QG+LGIKV
Sbjct: 1 MESGARGAEVIVSGKIKGQRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KIM+ D +GK+GP PLPD VTI + K+E
Sbjct: 61 KIMMDHDSSGKKGPRKPLPDTVTILAAKEE 90
>gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3 [Methanosarcina barkeri str. Fusaro]
gi|91207819|sp|Q46GA1.1|RS3_METBF RecName: Full=30S ribosomal protein S3
gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
Length = 311
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 112/208 (53%), Gaps = 11/208 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV DG A ++E +L GY G+E+ TPM T+I+I + + V+G+ G+ IR
Sbjct: 4 ERKFVNDGFVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V R+ EN ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVAARYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV+E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
I+ P LPD T P +
Sbjct: 182 IIQ---------PGVVLPDSYTTTEPSE 200
>gi|448411351|ref|ZP_21575816.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
gi|445670539|gb|ELZ23138.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
Length = 319
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 124/216 (57%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+EV TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTELEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P +D V +++ G +G+
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDHGVGTAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
+VKI+ P LPD ++ + E+YV
Sbjct: 179 QVKIIP---------PEAELPDDFEVYEDMEVEDYV 205
>gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
Length = 317
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 125/219 (57%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNARIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GAKG E+++SGK+ R++ KF GY+ +G+P +DS V +++ G +G+
Sbjct: 119 RIMEAGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAENIVDSGVGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
+VKI+ P LPD I+ + E+YV T
Sbjct: 179 RVKIIP---------PEAELPDDFEIYEDVEVEDYVADT 208
>gi|429190338|ref|YP_007176016.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|448326250|ref|ZP_21515617.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
gi|429134556|gb|AFZ71567.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|445612907|gb|ELY66624.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
Length = 317
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 124/224 (55%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD +H D EE V + A +
Sbjct: 179 TVKIIP---------PNAQLPDDFHVHEDLDPEELVPDAVEANE 213
>gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
Length = 275
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 113/207 (54%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTPM T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKSKFNLENPQVEV--KEVDVPELNPRIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ GVLG+ V+
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSTKHVKEGFATVQLKPGVLGVYVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPK 214
IM P LPD V I +PK
Sbjct: 181 IMP---------PEVVLPDKVEIEAPK 198
>gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160]
gi|91207821|sp|Q3IMY2.1|RS3_NATPD RecName: Full=30S ribosomal protein S3
gi|76558928|emb|CAI50524.1| 30S ribosomal protein S3 [Natronomonas pharaonis DSM 2160]
Length = 305
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 125/217 (57%), Gaps = 11/217 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E + EL+ GY G+EV TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIHDGLQRTQIDEFFSEELSRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+I+SGK+ R++ KF GY+ +G+P +DS V +++ G +G+
Sbjct: 119 RIMESGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
+VKI+ P LPD ++ + E++V+
Sbjct: 179 QVKIIP---------PEAELPDDFEVYEDIEVEDFVE 206
>gi|435848742|ref|YP_007310992.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
gi|433675010|gb|AGB39202.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
Length = 326
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEVVDHGQATAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD +H D EE V + A +
Sbjct: 179 DVKIIP---------PGAELPDDFQVHDEMDPEEVVPDAVEANE 213
>gi|383625039|ref|ZP_09949445.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|448697495|ref|ZP_21698535.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|445781448|gb|EMA32304.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
Length = 318
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 124/224 (55%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 TVKIIP---------PDAQLPDDFEIHEDLDPEEVVPEAVEANE 213
>gi|448726788|ref|ZP_21709180.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
gi|445793834|gb|EMA44405.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
Length = 370
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 126/227 (55%), Gaps = 11/227 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E ELA GY G+++ TPM T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQEIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEV 231
VKI+ P LPD IH D E V + ++E
Sbjct: 179 TVKIIP---------PNADLPDDFRIHEDVDTESLVPDEIEGDEVEA 216
>gi|410722176|ref|ZP_11361485.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
gi|410597412|gb|EKQ52031.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
Length = 274
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 11/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ ++ VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 AITQNLKNNYELENPQVEV--KEVDIPELNPKIMAHKISAMLQRGMHFRRVAYSALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P +Y+ L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
IM P LPD V I PK EE
Sbjct: 181 IM---------PPDVVLPDKVDIIQPKVEE 201
>gi|374630584|ref|ZP_09702969.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
gi|373908697|gb|EHQ36801.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
Length = 242
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 116/217 (53%), Gaps = 11/217 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S +++FV DGV A + + L +EL GY G E+ TP+ T++ I A + V+G+ G+
Sbjct: 1 MSVEKRFVEDGVRAARVEKFLVKELKRAGYGGTEIIRTPLGTQVTIFAEKPGIVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+RELTS +Q + +E+ ++V N A AE L L G R+A ++R
Sbjct: 61 VVRELTSTLQNDYGIESPQIEV--QQVENPSFNAQIMAERLANSLERGWYFRKAGSSIMR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA GCEV+VSGKL RA+ KF +GY+ +G+P ++ + + G +G
Sbjct: 119 RIMESGALGCEVVVSGKLTGSRARVQKFTEGYIKHAGEPSETIVEHGFAIAVKKLGCIGC 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
+VKI+ P LPD + P+ E VK
Sbjct: 179 QVKIVP---------PGAILPDHFEVIEPEAVPEPVK 206
>gi|448350187|ref|ZP_21539006.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
gi|445637694|gb|ELY90842.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
Length = 328
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 124/224 (55%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 TVKIIP---------PNAELPDDFEIHEDADPEELVPEAVEANE 213
>gi|448352603|ref|ZP_21541385.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
gi|445642165|gb|ELY95235.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
Length = 330
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 124/224 (55%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 TVKIIP---------PNAELPDDFQIHEDMDPEELVPEAVEANE 213
>gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
Length = 241
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R+FV DGV A + + L +EL GY G E+ TP+ T+I I A + V+G+ G+ +R
Sbjct: 4 ERRFVEDGVRAARVEKYLRKELKRAGYGGTEIVRTPLGTQITIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
E+TS +Q + +E+ ++V N A AE L L G R+A ++R IM
Sbjct: 64 EITSNLQNDYGIESPQIEV--QQVENPAFNAQIMAERLANSLERGWYFRKAGTSIIRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEV++SGKL R++ KF +GY+ +G+P ++ + + GV+G +VK
Sbjct: 122 ESGALGCEVVISGKLTGARSRVQKFTEGYIKHAGEPSETIVEHGFAIAIKKLGVIGCQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPK 214
I+ P G Q LPD + P+
Sbjct: 182 IV----PPGAQ-----LPDHFEVLEPE 199
>gi|448358810|ref|ZP_21547484.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
gi|445644490|gb|ELY97503.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
Length = 329
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 TVKIIP---------PNAELPDDFQIHEDMDPEELVPEAVEANE 213
>gi|408381916|ref|ZP_11179463.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
gi|407815364|gb|EKF85949.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
Length = 426
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 112/210 (53%), Gaps = 11/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ ++ VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 AITQNLKNSYELENPQVEV--KEVDVPELNPKIMAHKISAMLQRGMHFRRVAYSALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P +Y+ L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFTDGYIKKCGEPSIKYVKQGFATAPLKPGVLGISVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
IM P LPD V I PK EE
Sbjct: 181 IM---------PPDVVLPDKVDIIQPKVEE 201
>gi|448737868|ref|ZP_21719901.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
gi|445802830|gb|EMA53131.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
Length = 383
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 127/226 (56%), Gaps = 16/226 (7%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E ELA GY G+++ TPM T+I++RA + V+G+ G+
Sbjct: 1 MATEQEFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPSQDIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
VKI+ P LPD IH D E +LV DIE
Sbjct: 179 TVKIIP---------PNADLPDDFRIHEDVDTE-----SLVPEDIE 210
>gi|289579904|ref|YP_003478370.1| 30S ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|448281144|ref|ZP_21472452.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|445579468|gb|ELY33862.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
Length = 335
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 TVKIIP---------PNAELPDDFQIHEDMDPEELVPEAVEANE 213
>gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
Length = 214
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 115/206 (55%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
+ + +G AEL+E+ + ++ Y+G+E+++ +I I+ +L +K ++L
Sbjct: 8 QIIKEGKIKAELDELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQL 67
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+++ +R + + EK+ ++ L AE LR + +R ++R + ++
Sbjct: 68 QNMIAQRLNMIPEHIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQA 127
Query: 130 GAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G +G + VSGK++ QRAK+ KF DG ++ +GQP EYI A L +QGV+GI++ IM
Sbjct: 128 GGQGVCIRVSGKIKGQRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQGVIGIQISIM 187
Query: 190 LSWDPNGKQGPTTPLPDLVTIHSPKD 215
L +D G +GP+ + D + + SPK+
Sbjct: 188 LPYDSEGIRGPSELIADKIKVISPKN 213
>gi|448369933|ref|ZP_21556386.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
gi|445650373|gb|ELZ03297.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
Length = 328
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 125/226 (55%), Gaps = 11/226 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
VKI+ P LPD IH D EE V + A + +
Sbjct: 179 TVKIIP---------PNAELPDDFEIHEDVDPEELVPEAVEANEAD 215
>gi|448362298|ref|ZP_21550909.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
gi|445648819|gb|ELZ01767.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
Length = 326
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 124/224 (55%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAAEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 TVKIIP---------PNAELPDDFEIHEDVDPEELVPEAVEANE 213
>gi|448704122|ref|ZP_21700603.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
gi|445796511|gb|EMA47015.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
Length = 320
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +GQP E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGQPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD +H D +E V + A +
Sbjct: 179 TVKIIP---------PNAQLPDDFHVHEDLDPKEIVPDAVEANE 213
>gi|402584605|gb|EJW78546.1| hypothetical protein WUBG_10543 [Wuchereria bancrofti]
Length = 103
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/82 (74%), Positives = 69/82 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+GR
Sbjct: 1 MSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGR 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
RIRELTSVVQKRF F + +VE+
Sbjct: 61 RIRELTSVVQKRFGFADGTVEV 82
>gi|289597187|ref|YP_003483883.1| 30S ribosomal protein S3 [Aciduliprofundum boonei T469]
gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
Length = 237
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 115/211 (54%), Gaps = 12/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T II+ R V+G KG +I+
Sbjct: 3 ERKFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +Q+ F ++E+ ++ N L A A+ L L G RRA + LR IM
Sbjct: 63 ELTDKLQQDFGVENPTIEV--KESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GAKG ++I+SGKL RA++ KF DG + +G+PV E + + G++G+ VK
Sbjct: 121 EAGAKGAQIIISGKLTGDRARTEKFMDGTIKYNGKPV-ELVRMGYATAKTKPGIIGVTVK 179
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD V I P + EE
Sbjct: 180 IMP---------PDAKLPDEVNILPPVEAEE 201
>gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6094177|sp|O26116.1|RS3_METTH RecName: Full=30S ribosomal protein S3
gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 258
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 112/207 (54%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTPM T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKNKFDLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ + KF DGY+ G+P +++ V L+ GVLG+ V+
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPK 214
IM P LPD V I P+
Sbjct: 181 IMP---------PDVVLPDKVEIEDPR 198
>gi|432092120|gb|ELK24807.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 133
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 57/90 (63%), Positives = 66/90 (73%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
ME GA GCEV+VSGKL+ QRA S+K DG M+ SG PVN Y+D+AV H L R+G LGIKV
Sbjct: 1 MERGADGCEVVVSGKLQGQRAASVKVVDGLMIRSGDPVNCYVDTAVHHGLPRRGGLGIKV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
KI L WDP GK+GP P PD V+ PKDE
Sbjct: 61 KITLPWDPGGKRGPKKPPPDCVSTVEPKDE 90
>gi|284165498|ref|YP_003403777.1| 30S ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
Length = 317
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 DVKIIP---------PGAELPDDFEIHEEMDPEELVPDAVEANE 213
>gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940]
gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 121/217 (55%), Gaps = 11/217 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADELQFIQDGIQRTQIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
VKI+ P LPD I+ + E+YV+
Sbjct: 179 DVKIIP---------PNAELPDDFEIYEDVEVEDYVE 206
>gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3 [Methanosarcina acetivorans C2A]
gi|27734505|sp|Q8TRU1.1|RS3_METAC RecName: Full=30S ribosomal protein S3
gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A]
Length = 318
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L+ GY G+E+ TPM T+I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVANKYSLENPQID--AQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIQ---------PGVVLPD 191
>gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1]
gi|152060874|sp|A3CT03.1|RS3_METMJ RecName: Full=30S ribosomal protein S3
gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1]
Length = 234
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 118/225 (52%), Gaps = 14/225 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KF+ DGV + + LT+EL GY G+++ TP+ T++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + VE+ ++V N A AE L L G R+A +R IM
Sbjct: 64 QLTQDLATDYDIESPQVEV--QQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEVIV+GKL R+++ KF +GY+ G+P ++ + + G +G++VK
Sbjct: 122 ESGALGCEVIVAGKLTGSRSRTQKFTEGYIKHCGEPSETIVEKGYALAIKKLGTIGVQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSP---KDEEEYVKPTLVATDI 229
I+ P LPD + P K E ++P V D+
Sbjct: 182 IVP---------PDARLPDAFDVLEPEPKKAPAEPIEPEEVGDDV 217
>gi|448323157|ref|ZP_21512621.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
gi|445600343|gb|ELY54356.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
Length = 313
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD +H D EE V + A +
Sbjct: 179 DVKIIP---------PGAKLPDDFQVHDEMDPEEVVPDAVEANE 213
>gi|452206442|ref|YP_007486564.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
gi|452082542|emb|CCQ35800.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
Length = 301
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 123/217 (56%), Gaps = 11/217 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL+ GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRTQIDEFFAEELSRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEDFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+I+SGK+ R++ KF GY+ +G+P +DS V +++ G +G+
Sbjct: 119 RIMDSGALGAEIILSGKVTGARSRVEKFNRGYIKHNGEPAETIVDSGVGTAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
+VKI+ P LPD ++ + E+++
Sbjct: 179 RVKIIP---------PNAELPDDFEVYEDVEVSEFIE 206
>gi|432332005|ref|YP_007250148.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
gi|432138714|gb|AGB03641.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
Length = 231
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 127/232 (54%), Gaps = 22/232 (9%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+GV A + + L++EL GY G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGVRKARVEKYLSKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + +E+ ++VNN A AE L L G R+A +LR +M
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVNNPSFNAQIMAERLANALERGWYFRKAGTSILRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEV+++GKL RA++ KF +GY+ G+P N ++ + + GV+G++VK
Sbjct: 122 DSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGYAVAVKKLGVIGVQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA-------TDIEVP 232
++ P G + LPD H E+E +P A TD+E P
Sbjct: 182 LV----PAGAK-----LPD----HFSVVEQEKKRPVQNASVTPVSDTDVEEP 220
>gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3 [Thermococcus onnurineus NA1]
gi|254764554|sp|B6YSL9.1|RS3_THEON RecName: Full=30S ribosomal protein S3
gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1]
Length = 208
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVREMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVS 181
Query: 188 IMLSWDPNGKQGPTTPLPDLV-TIHSPKDEEE 218
IM P LPD + I P EEE
Sbjct: 182 IM---------PPDAKLPDEIEVIEKPIQEEE 204
>gi|452210667|ref|YP_007490781.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
gi|452100569|gb|AGF97509.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
Length = 307
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TPM T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVATKYNLENPQID--AQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIQ---------PGVVLPD 191
>gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3 [Methanosarcina mazei Go1]
gi|27734502|sp|Q8PV44.1|RS3_METMA RecName: Full=30S ribosomal protein S3
gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1]
Length = 307
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TPM T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V ++ ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVATKYNLENPQID--AQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCEV++SGKL R++ KF DGY+ SG PV E +D + + G LG KV+
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIQ---------PGVVLPD 191
>gi|448392355|ref|ZP_21567129.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
gi|445664445|gb|ELZ17154.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
Length = 318
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD IH D EE V + A +
Sbjct: 179 DVKIIP---------PGAELPDDFEIHEEMDPEELVPDAVEANE 213
>gi|383319759|ref|YP_005380600.1| 30S ribosomal protein S3 [Methanocella conradii HZ254]
gi|379321129|gb|AFD00082.1| SSU ribosomal protein S3P [Methanocella conradii HZ254]
Length = 280
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TPM T+I I+A + ++G+ G+ IR
Sbjct: 4 EKKFVQDGFKKAMIDEFFLEKLERAGYGGMEINRTPMGTQITIKAEKPGMIIGKSGKMIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+ T + RFK ++ ++ ++V L A A L L G R+A L+ IM
Sbjct: 64 KFTRDLDVRFKM--DNPQIDVQEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E++++GKL R ++ KF GY+ G+PV ++ID + GV+G+KV+
Sbjct: 122 DAGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEQFIDVGYARAKKKLGVIGVKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P T LPD + I P+ E E
Sbjct: 182 IMP---------PGTVLPDHIEIVPPQKEAE 203
>gi|297619583|ref|YP_003707688.1| 30S ribosomal protein S3 [Methanococcus voltae A3]
gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3]
Length = 218
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 112/205 (54%), Gaps = 11/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V A +NE ++L + GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVTNNVSEALINEYFCKKLVKAGYSHIDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ +K +E+ +++ N L + L G+ R+ + +R +M
Sbjct: 63 ELTETLRTVYKIENPQIEV--KQIENADLDPAVVGHKIAASLEKGMHFRKTAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG +IVSGKL +R+++ KF DGYM G+P E + + + L+ GV+G+ VK
Sbjct: 121 NAGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPSEELVMKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHS 212
IML P LPD + I S
Sbjct: 181 IML---------PDVSLPDEIVITS 196
>gi|448311974|ref|ZP_21501727.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603595|gb|ELY57557.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
Length = 315
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEQFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD +H D EE V + A +
Sbjct: 179 NVKIIP---------PGAELPDDFGVHEEMDPEELVPEAVEANE 213
>gi|397780850|ref|YP_006545323.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
gi|396939352|emb|CCJ36607.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
Length = 234
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KF+++GV + + LT+EL GY G+++ TP+ T+I I A + V+G+ G+++R
Sbjct: 4 EKKFISEGVRNVRVEKFLTKELKRAGYGGMDITRTPLGTQITIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F VE+ ++V N A AE L L G R+A +R +M
Sbjct: 64 QLTQDLATHFGIESPQVEV--QQVQNPNFSAQIMAERLANALERGWYFRKAGQSTIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEVIV+GKL R+++ KF +GY+ SG+P ++ + + G +G++VK
Sbjct: 122 ESGALGCEVIVAGKLTGARSRTQKFTEGYVKHSGEPSETIVEKGYALAVKKLGTIGVQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPK 214
I+ P LPD + P+
Sbjct: 182 IVP---------PGAKLPDTFEVLEPE 199
>gi|296109315|ref|YP_003616264.1| 30S ribosomal protein S3 [methanocaldococcus infernus ME]
gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
Length = 211
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 113/210 (53%), Gaps = 12/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E +EL + GYS E++ TP+ T++ I A R V+G +G RI+
Sbjct: 3 ERIFIKENVKKVLIDEFFKKELFKAGYSHCEIKKTPIGTKVTIYAERPGFVIGRRGSRIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ K FK +++ + V N L A AE + L G+ RR + +R +M
Sbjct: 63 ELTEILAKEFKLDRPQIDV--KPVENPDLDAQVVAEKIARALERGMHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P + +D L + GV+G+ VK
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGEPAEDLVDKGRAIALTKPGVIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
IM P LPD + I KD E
Sbjct: 181 IMR---------PDVLLPDEIVIKE-KDME 200
>gi|335437506|ref|ZP_08560282.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|335438903|ref|ZP_08561634.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334890174|gb|EGM28448.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334895854|gb|EGM34017.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 120/217 (55%), Gaps = 11/217 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G+EV TPM T+I++ A + V+G+ G+
Sbjct: 1 MADELQFIEDGLQRTQIDEFFEDELGRAGYGGMEVAKTPMGTQIVLEAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++ F + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGAKG E+++SGK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMESGAKGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
VKI+ P LPD I+ + E+YV+
Sbjct: 179 DVKIIP---------PEAELPDDFEIYEDVEVEDYVE 206
>gi|222480851|ref|YP_002567088.1| 30S ribosomal protein S3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
Length = 312
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 118/211 (55%), Gaps = 11/211 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
VKI+ P G Q LPD I D
Sbjct: 179 NVKII----PPGAQ-----LPDDFDIREDAD 200
>gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3 [Pyrococcus furiosus DSM 3638]
gi|397652533|ref|YP_006493114.1| 30S ribosomal protein S3 [Pyrococcus furiosus COM1]
gi|27734507|sp|Q8U004.1|RS3_PYRFU RecName: Full=30S ribosomal protein S3
gi|428697931|pdb|3J20|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
gi|393190124|gb|AFN04822.1| 30S ribosomal protein S3P [Pyrococcus furiosus COM1]
Length = 210
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 117/213 (54%), Gaps = 11/213 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +E+ E++ N L A QA L L G+ RRA Y LR IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
IM P LPD + I EEE V
Sbjct: 182 IM---------PPGARLPDEIEIIEKPVEEEVV 205
>gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|448294705|ref|ZP_21484784.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|445586382|gb|ELY40664.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
Length = 302
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 124/219 (56%), Gaps = 11/219 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G+EV TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGMQRSQIDEFFATELERAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P + +D + +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYVKHNGEPAEDIVDKGLGTAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 223
VKI+ P G Q LPD IH + E+ + T
Sbjct: 179 NVKII----PPGAQ-----LPDDFEIHDDAEVEDLIAET 208
>gi|374635645|ref|ZP_09707239.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
gi|373561498|gb|EHP87731.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
Length = 208
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 115/210 (54%), Gaps = 14/210 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV D + ++E + LA+ GYS +E+R TP+ T+I I A + V+G +G+R++
Sbjct: 3 ERIFVDDNIKEMLIDEYFKKALAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRRGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++ +K + +E+ + +++ L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLENTYKVDKPQIEVKS--IDDPNLDPEVVAQKIASSLERGMHFRRVAHAAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G P + A + L+ GV+G+ VK
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
IM P LPD V I KDEE
Sbjct: 181 IM---------PPDIVLPDEVII---KDEE 198
>gi|336252434|ref|YP_004595541.1| 30S ribosomal protein S3 [Halopiger xanaduensis SH-6]
gi|335336423|gb|AEH35662.1| ribosomal protein S3 [Halopiger xanaduensis SH-6]
Length = 320
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 123/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G+EV TPM T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEIVDEGQATAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD + D EE V + A +
Sbjct: 179 TVKIIP---------PGAELPDDFEVSEDVDPEELVPEAVEANE 213
>gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3 [Methanospirillum hungatei JF-1]
gi|121731027|sp|Q2FT39.1|RS3_METHJ RecName: Full=30S ribosomal protein S3
gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1]
Length = 237
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 107/193 (55%), Gaps = 6/193 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVADGV + L EL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVADGVRKVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT + + +E+ ++V+N L A AE L L G R+A LR IM
Sbjct: 64 TLTQDLATTYGVESPQIEV--QQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEV++SGKL R + KF +GY+ SG PVN +D + + GV+G++V+
Sbjct: 122 DSGALGCEVVISGKLTGARGRVQKFTEGYIKHSGDPVNTLVDKGYAVAIKKLGVIGVQVR 181
Query: 188 IMLSWDPNGKQGP 200
++ P G Q P
Sbjct: 182 LI----PPGAQLP 190
>gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3 [Methanocaldococcus jannaschii DSM 2661]
gi|1710763|sp|P54034.1|RS3_METJA RecName: Full=30S ribosomal protein S3
gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM
2661]
Length = 208
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL++ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSKAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|326914668|ref|XP_003203646.1| PREDICTED: 40S ribosomal protein S3-like, partial [Meleagris
gallopavo]
Length = 63
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/63 (92%), Positives = 59/63 (93%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLA
Sbjct: 1 TQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLA 60
Query: 115 VRR 117
VRR
Sbjct: 61 VRR 63
>gi|432328995|ref|YP_007247139.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
gi|432135704|gb|AGB04973.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
Length = 239
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 115/210 (54%), Gaps = 12/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T I++ R V+G KG +I+
Sbjct: 3 ERKFVKESVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIVLEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +Q+ F ++E+ ++ +N L A A+ L L G RRA + LR IM
Sbjct: 63 ELTDRLQQDFGVENPTIEV--KESDNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GAKG ++I++GKL RA++ KF G + +G+PV E + + G++G+ VK
Sbjct: 121 EAGAKGAQIIIAGKLTGDRARTEKFMAGTIKYNGKPV-ELVRFGYATAKTKPGIIGVTVK 179
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
IM P LPD + I P +EE
Sbjct: 180 IMP---------PDAKLPDEINIIPPSEEE 200
>gi|448441443|ref|ZP_21589106.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
gi|445688852|gb|ELZ41099.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
Length = 312
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTI 210
VKI+ P G Q LPD I
Sbjct: 179 NVKII----PPGAQ-----LPDDFDI 195
>gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
gi|259495260|sp|C6A165.1|RS3_THESM RecName: Full=30S ribosomal protein S3
gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
Length = 207
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +G+ ++E L +EL GY G++++ TP+ T+++I R V+G GR+IR
Sbjct: 4 ERYFIKEGIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++++RF +E+ E++ N A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERRFNLENPQIEV--EEIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GVLG+KV
Sbjct: 122 SNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVS 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + I EEE
Sbjct: 182 IM---------PPDARLPDEIEIVEKPIEEE 203
>gi|448460071|ref|ZP_21596991.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
gi|445807789|gb|EMA57870.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
Length = 314
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTI 210
VKI+ P G Q LPD I
Sbjct: 179 NVKII----PPGAQ-----LPDDFDI 195
>gi|448399316|ref|ZP_21570618.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
gi|445669223|gb|ELZ21836.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
Length = 310
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD ++ D EE V + A +
Sbjct: 179 DVKIIP---------PGAELPDDFEVNEDMDPEELVPDAVEANE 213
>gi|355571377|ref|ZP_09042629.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
gi|354825765|gb|EHF09987.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
Length = 239
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 125/226 (55%), Gaps = 18/226 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+G A + + L +EL GY G++++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGARRARVEKHLKKELKRAGYGGMDLQRTPLGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F +E+ ++V N A AE L L G R+A ++R +M
Sbjct: 64 QLTQDLATDFAVESPQIEV--QQVPNPNFNAQIMAERLANALERGWYFRKAGQSIIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA GCEVI++GKL RA+ KF +GY+ SG+PVN ++ + + GV+G++VK
Sbjct: 122 DAGALGCEVIIAGKLTGARARVQKFTEGYIKHSGEPVNTIVEKGYAVAVKKLGVIGVQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPI 233
I+ P G + +PD + + +++ E IE+P+
Sbjct: 182 II----PAGAK-----IPDHFEVTAKREKPE-------KKGIEIPV 211
>gi|337283650|ref|YP_004623124.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
gi|334899584|gb|AEH23852.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
Length = 210
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT V++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRVLERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + I EEE
Sbjct: 182 IM---------PPEARLPDEIEIIEKPVEEE 203
>gi|448315118|ref|ZP_21504771.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
gi|445612377|gb|ELY66103.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
Length = 295
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD I+ D EE V + A +
Sbjct: 179 DVKIIP---------PGAELPDDFQINDDADPEELVPDAVEANE 213
>gi|448377812|ref|ZP_21560508.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
gi|445655756|gb|ELZ08601.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
Length = 314
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P +E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVAT 227
VKI+ P LPD + D EE V + A
Sbjct: 179 DVKIIP---------PGAELPDDFHVEEDLDPEEVVPDAVEAN 212
>gi|448463236|ref|ZP_21598014.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
gi|445817231|gb|EMA67107.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
Length = 312
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 115/206 (55%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGAKLPDDFDI 195
>gi|448309700|ref|ZP_21499556.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
gi|445589557|gb|ELY43787.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
Length = 308
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD ++ D EE V + A +
Sbjct: 179 NVKIIP---------PGAKLPDDFAVYEDMDPEEVVPDAVEANE 213
>gi|448475304|ref|ZP_21603022.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
gi|445816775|gb|EMA66662.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
Length = 313
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 121/222 (54%), Gaps = 11/222 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++TS ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITSELEDRFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVA 226
VKI+ P LPD I + E + T+ A
Sbjct: 179 TVKIIP---------PGAKLPDDFDIREDAEVPEVEQATVGA 211
>gi|448298471|ref|ZP_21488500.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
gi|445591667|gb|ELY45868.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
Length = 323
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD +H D E V + A +
Sbjct: 179 DVKIIP---------PGAELPDDFGVHEDMDPAEIVPDAVEANE 213
>gi|448503706|ref|ZP_21613335.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
gi|445691907|gb|ELZ44090.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
Length = 312
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 116/206 (56%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTI 210
VKI+ P LPD I
Sbjct: 179 NVKIIP---------PGATLPDDFEI 195
>gi|448489446|ref|ZP_21607669.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
gi|445694818|gb|ELZ46936.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
Length = 313
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
Length = 292
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 11/209 (5%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV DG A ++E +L GY G+++ TPM T+I IRA + ++G+ G+ IR+
Sbjct: 5 KKFVQDGFKKAMIDEFFLEKLERAGYGGMDINRTPMGTQITIRAEKPGMIIGKSGKMIRK 64
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
T + RFK ++ ++ ++V L A A L L G R+A L+ IM+
Sbjct: 65 FTKDLDVRFKM--DNPQIDVQEVKRPELNAQMMATRLANALERGWYFRKAGQSTLQRIMD 122
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
SGA G E++++GKL R ++ KF GY+ G+PV E++D + G++G+KV+I
Sbjct: 123 SGAMGVEIVIAGKLTGPRKRTEKFIAGYIKHCGKPVEEFVDVGYARAKKKLGIIGVKVRI 182
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
M P + LPD + + K EE
Sbjct: 183 MP---------PGSVLPDHIEVLPIKKEE 202
>gi|170033439|ref|XP_001844585.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167874323|gb|EDS37706.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 258
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 95/194 (48%), Gaps = 58/194 (29%)
Query: 29 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LA GY GVE VTP R+EIII TRTQN+LGEK IRELT++VQK
Sbjct: 101 LAAVGYFGVEFHVTPNRSEIII-TTRTQNMLGEKRHSIRELTAIVQK------------- 146
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAK 148
L+GGL+V ACY V+ ++SGAKG E ++
Sbjct: 147 --------------------LIGGLSVCGACYDVV--AVDSGAKGFEAVLF--------- 175
Query: 149 SMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLV 208
P NEY D+ RHVLLR VL I+VKI+L W+PNGK G PL V
Sbjct: 176 -------------DPCNEYFDTITRHVLLRLEVLEIQVKIILQWEPNGKIGQKEPLQHNV 222
Query: 209 TIHSPKDEEEYVKP 222
+ +DE Y P
Sbjct: 223 LVVEQRDEIMYNTP 236
>gi|448426501|ref|ZP_21583350.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|448452129|ref|ZP_21593149.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|448484340|ref|ZP_21606047.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
gi|445679381|gb|ELZ31848.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|445809773|gb|EMA59811.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|445820115|gb|EMA69944.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
Length = 314
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|448302872|ref|ZP_21492822.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
gi|445593879|gb|ELY48046.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM 14089]
Length = 313
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 121/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ +F + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD ++ D EE V + A +
Sbjct: 179 NVKIIP---------PGAELPDDFAVYEDMDPEEVVPDAVEANE 213
>gi|448508622|ref|ZP_21615573.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|448517695|ref|ZP_21617269.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
gi|445697248|gb|ELZ49318.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|445705910|gb|ELZ57798.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
Length = 314
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 115/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|289193197|ref|YP_003459138.1| 30S ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
Length = 207
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL+ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSRAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTEKLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + G++G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGIIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|448535702|ref|ZP_21622222.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
gi|445703203|gb|ELZ55138.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
Length = 312
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|333910788|ref|YP_004484521.1| 30S ribosomal protein S3 [Methanotorris igneus Kol 5]
gi|333751377|gb|AEF96456.1| ribosomal protein S3 [Methanotorris igneus Kol 5]
Length = 209
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E + LA+ GYS +E+R TP+ T+I I A + V+G KG+R++
Sbjct: 3 ERVFVEESIKEMLIDEYFKKTLAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRKGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT ++K +K N ++ + + + L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLEKTYKV--NKPQIEVKPIEDPNLDPEVVAQKIATSLERGMHFRRVAHAAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G P + A + L+ GV+G+ VK
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFMAGYMKHCGDPSETLVRKAFKLAKLKLGVIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD V I
Sbjct: 181 IM---------PPDIVLPDEVII 194
>gi|448436258|ref|ZP_21587059.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
gi|445682926|gb|ELZ35336.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
Length = 312
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 NVKIIP---------PGATLPD 191
>gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
gi|121687826|sp|Q0W1Y3.1|RS3_UNCMA RecName: Full=30S ribosomal protein S3
gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
Length = 279
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 11/204 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E +L GY G+E+ TPM T+I ++A + ++G+ G+ IR
Sbjct: 4 EKKFVQEGFKKAMVDEYFLEKLERAGYGGMEINRTPMGTQITLKAEKPGMIIGKAGKSIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
T + RFK +++ ++V L A A L L G R+A L+ IM
Sbjct: 64 RYTKEMDMRFKMDNPQIDV--QEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEVI++GKL R + KF GY+ G+PV E +D + G++G+KV+
Sbjct: 122 DSGAMGCEVIIAGKLTGARKRREKFIAGYIKHCGKPVEELVDVGYARAKKKLGIIGVKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIH 211
IM P LPD +TI
Sbjct: 182 IMP---------PEAVLPDQITIE 196
>gi|448338128|ref|ZP_21527180.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
gi|445623303|gb|ELY76725.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
Length = 314
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ P LPD + D EE V
Sbjct: 179 DVKIIP---------PGAELPDDFEVSEDMDPEEVV 205
>gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
gi|121687004|sp|Q12ZU5.1|RS3_METBU RecName: Full=30S ribosomal protein S3
gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
Length = 304
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 122/223 (54%), Gaps = 16/223 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E ++L+ GY G+++ TPM T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMDEYFAKQLSRAGYGGMDINRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V L A A L + G R+A + +R +M
Sbjct: 64 KLTRDVDRLYDL--DNPQIDAQEVKRPELNAQMMASRLASSIERGWYFRKAGHNTMRAVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++ K +GY+ +G+PV++ +D + + G LG KV+
Sbjct: 122 NAGALGCEIVISGKLTGSRSRVEKMVNGYIKHAGKPVDDIVDDGFATAVKKLGTLGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIE 230
I+ P LPD + K+ EE +LV+T +E
Sbjct: 182 IIH---------PDAVLPDSYRL---KNAEEL--GSLVSTPVE 210
>gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z]
gi|152060873|sp|A2SPK9.1|RS3_METLZ RecName: Full=30S ribosomal protein S3
gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z]
Length = 231
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFVADGV + + L +EL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 EKKFVADGVRKVRVEQYLNKELKRAGYGGMDIVRTPVGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT+ + + VE+ ++V N L A AE L L G R+A V+R +M
Sbjct: 64 QLTTDLSTVYGIESPQVEV--QQVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEVI++GKL RA+ KF +GY+ SG+P ++ + + G++G++VK
Sbjct: 122 DSGALGCEVIIAGKLTGARARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IVP---------PGAKLPD 191
>gi|448345591|ref|ZP_21534480.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
gi|445633524|gb|ELY86711.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
Length = 312
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ P LPD + D EE V
Sbjct: 179 DVKIIP---------PGAELPDDFEVSEDMDPEEVV 205
>gi|397773837|ref|YP_006541383.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|448341384|ref|ZP_21530345.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
gi|397682930|gb|AFO57307.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|445628066|gb|ELY81377.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
Length = 312
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ ++ RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ P LPD + D EE V
Sbjct: 179 DVKIIP---------PGAELPDDFEVSEDMDPEEVV 205
>gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790]
gi|385804235|ref|YP_005840635.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
gi|121689634|sp|Q18GF5.1|RS3_HALWD RecName: Full=30S ribosomal protein S3
gi|109626482|emb|CAJ52943.1| 30S ribosomal protein S3 [Haloquadratum walsbyi DSM 16790]
gi|339729727|emb|CCC41005.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
Length = 323
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEDRFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
I+ESGA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIIESGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
VKI+ P LPD IH D
Sbjct: 179 TVKIIP---------PGAELPDDFEIHDDVD 200
>gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061]
gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
gi|172048064|sp|A5UL83.1|RS3_METS3 RecName: Full=30S ribosomal protein S3
gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061]
gi|222434612|gb|EEE41777.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2375]
gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V++TP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELERAGYGGMDVQITPLGTMVVVYAERPGMVIGRGGKNVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T+ ++ F +E+ ++V+ L A + L G+ RR Y +R IM
Sbjct: 63 AITNTLKNDFGLDNPQIEV--KEVSVPELNPKIMAYKIANMLQRGMHFRRVAYSTIRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF +GY+ G+P ++ V L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSAVAKFVEGYIKKCGEPSIRLVEEGFATVQLKPGVLGIYVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPK 214
IM P T LPD V I PK
Sbjct: 181 IM---------PPETVLPDSVEILPPK 198
>gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3 [Halobacterium sp. NRC-1]
gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1]
gi|21264507|sp|P15009.3|RS3_HALSA RecName: Full=30S ribosomal protein S3; AltName: Full=HHAS3;
AltName: Full=HS4
gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum]
gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|167727443|emb|CAP14231.1| 30S ribosomal protein S3 [Halobacterium salinarum R1]
Length = 302
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TPM +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVEEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IMESGA G E+++SGK+ R + KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMESGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ P LPD I D E+ V
Sbjct: 179 NVKIIP---------PNAELPDDFEIQEDADIEDLV 205
>gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
gi|121729293|sp|Q2NFW2.1|RS3_METST RecName: Full=30S ribosomal protein S3
gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
Length = 252
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 110/207 (53%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G++++VTP+ T +I+ A + V+G G+ +R
Sbjct: 3 EKDFVKEGLKRTRIDEYLETKLERAGYGGMDIQVTPVGTMVIVYAEKPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ F VE+ ++V+ L A + L G+ RR Y ++R IM
Sbjct: 63 AITKTLKNNFDLENPQVEV--KEVDVPELNPRIMAHKVVAMLQRGMQFRRVAYSIIRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF +GY+ G+P +Y+ V L+ GVLGI V+
Sbjct: 121 SAGAQGVEVTISGKIRGSRSACAKFNEGYIKKCGEPSIKYVKEGFATVQLKPGVLGIYVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPK 214
IM P LPD + I P+
Sbjct: 181 IM---------PPEVTLPDNIEISEPE 198
>gi|336477155|ref|YP_004616296.1| 30S ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
gi|335930536|gb|AEH61077.1| ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
Length = 311
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 106/182 (58%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A +NE ++L+ GY G+++ TPM T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMNEYFAKQLSRAGYGGMDLNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V N L A A L + G R+A + +R IM
Sbjct: 64 KLTREVDRMYNL--DNPQIDAQEVKNPALNAQIMASRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++ K +GY+ +G+PV++ +D + + G +G V+
Sbjct: 122 GAGALGCEIVLSGKLTGSRSRVEKMVNGYIKHAGKPVDDIVDYGFATAVKKLGTIGCVVR 181
Query: 188 IM 189
I+
Sbjct: 182 II 183
>gi|288560114|ref|YP_003423600.1| 30S ribosomal protein S3 [Methanobrevibacter ruminantium M1]
gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
Length = 251
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +I+ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLRRTRIDEYLEKELERAGYGGMEIQVTPLGTMVIVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ +F VE+ V L A A + L G+ RR Y +R IM
Sbjct: 63 AITQSLKTKFDLDNPQVEVKEVAVPE--LNARIMASKIANMLQRGMHFRRVAYSTIRKIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF +GY+ G+P ++ L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSAVAKFTEGYIKKCGEPATRFVTEGFATAPLKPGVLGIVVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD V I
Sbjct: 181 IM---------PPEATLPDKVDI 194
>gi|379994267|gb|AFD22760.1| 40S ribosomal protein S3, partial [Collodictyon triciliatum]
Length = 100
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 60/77 (77%)
Query: 138 VSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGK 197
VSGKLRAQRAK MKF+DGYM+ SG P Y+DSAVRHV++RQGVLG++V IML WDP G+
Sbjct: 4 VSGKLRAQRAKVMKFRDGYMIKSGNPTKVYVDSAVRHVMMRQGVLGVRVSIMLPWDPTGR 63
Query: 198 QGPTTPLPDLVTIHSPK 214
G P D++TI PK
Sbjct: 64 NGVKIPQADVITIRDPK 80
>gi|345005649|ref|YP_004808502.1| 30S ribosomal protein S3 [halophilic archaeon DL31]
gi|344321275|gb|AEN06129.1| ribosomal protein S3 [halophilic archaeon DL31]
Length = 312
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 118/207 (57%), Gaps = 11/207 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ ++KF+ DG+ ++++E EL GY G+++ TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEQKFIEDGLQRSQIDEFFADELGRAGYGGMDIAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR+++S +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVSSELEERFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+ME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RMMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTVVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIH 211
VK++ GP LPD I+
Sbjct: 179 NVKVI---------GPDAVLPDDFEIY 196
>gi|152060913|sp|A1RXG6.2|RS3_THEPD RecName: Full=30S ribosomal protein S3
Length = 202
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 105/181 (58%), Gaps = 2/181 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
RK ++ G+ + LNE L R+L Y + TP+ T++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ V+++ F +++ +V N+ L A A + L+ G+ RRA L IM
Sbjct: 66 IAEVLEREFGIENPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMA 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+G E+++SGKL +QR ++ KF GY+ SG+P E +D A+ HVLL+ G+ G+KV+I
Sbjct: 124 AGARGAEIVISGKLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRI 183
Query: 189 M 189
M
Sbjct: 184 M 184
>gi|389853111|ref|YP_006355345.1| 30S ribosomal protein S3 [Pyrococcus sp. ST04]
gi|388250417|gb|AFK23270.1| rpsC, small subunit ribosomal protein S3 [Pyrococcus sp. ST04]
Length = 210
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT +++ +F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 QLTRILESQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + I EEE
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEE 203
>gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
Length = 320
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 120/224 (53%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T + +RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITRELGERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM+SGA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDSGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQTIVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD I + EE V + A +
Sbjct: 179 DVKIIP---------PGADLPDDFQIEEGANPEELVPDAVEANE 213
>gi|395644922|ref|ZP_10432782.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
gi|395441662|gb|EJG06419.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
Length = 236
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 11/207 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV++GV + E L+REL GY G+++ TPM T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVSEGVTRVRVEEYLSRELKRAGYGGMDIVRTPMGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + F VE+ ++V N + A AE L L G R+A +R +M
Sbjct: 64 QLTQDLSTNFNLESPQVEV--QQVANPSVNAQIMAERLATALERGWYFRKAGQSTMRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCE+++SGKL R++ KF +GY+ G+P ++ + + G++G++VK
Sbjct: 122 ESGALGCEIVLSGKLTGARSRVQKFLEGYVKHCGEPSITIVEKGYAIAIKKLGIIGVQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPK 214
I+ P + LPD + PK
Sbjct: 182 II----PGDAK-----LPDRFEVLPPK 199
>gi|354610531|ref|ZP_09028487.1| ribosomal protein S3 [Halobacterium sp. DL1]
gi|353195351|gb|EHB60853.1| ribosomal protein S3 [Halobacterium sp. DL1]
Length = 323
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 120/216 (55%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TPM +I+++A + V+G+ G+
Sbjct: 1 MADEMQFIEQGLQRSQIDEFFATELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R + KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ PN K LPD I D E+ V
Sbjct: 179 SVKIIP---PNAK------LPDDFEIQEEADIEDLV 205
>gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3 [Methanoregula boonei 6A8]
gi|171769709|sp|A7I5P5.1|RS3_METB6 RecName: Full=30S ribosomal protein S3
gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8]
Length = 231
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 107/182 (58%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+G A + + LT+EL G+ G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGARKARVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + +E+ ++V N A AE L L G R+A ++R +M
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCEV+++GKL RA++ KF +GY+ G+P N ++ + + GV+G++VK
Sbjct: 122 DSGALGCEVVIAGKLTGARARTQKFTEGYIKHCGEPSNTIVEKGYAIAIKKLGVIGVQVK 181
Query: 188 IM 189
I+
Sbjct: 182 IV 183
>gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
Length = 210
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++K+F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILEKQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + I EEE
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEE 203
>gi|261402351|ref|YP_003246575.1| 30S ribosomal protein S3 [Methanocaldococcus vulcanius M7]
gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
Length = 206
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E +EL+ GYS +R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKEHIKEFLIDEYFKKELSRAGYSHCYIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K F + +++ + V N L A A+ + L G+ RR + +R +M
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGMHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGSAIAKTKPGVIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
Length = 307
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+ KFV DG A L+E ++L GY G+E+ TPM T+I I A + V+G+ G+ IR
Sbjct: 4 ENKFVTDGYVKASLDEYFAKQLNRAGYGGMEINRTPMGTQITIYAEKPGMVIGKGGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V K + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDVDKLYNM--DNPQIDAQEVKTPELNAQMMATRLAASIERGWYFRKAGHNAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+I+SGKL RA+ K GY+ +G+PV++ +D + + G +G KV+
Sbjct: 122 GAGALGCEIIMSGKLTGPRARVEKLVRGYIKHAGKPVDDIVDEGFATAVKKLGTIGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIH---------PDAVLPD 191
>gi|448329365|ref|ZP_21518665.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
gi|445614104|gb|ELY67785.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
Length = 322
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 118/216 (54%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ P LPD ++ D EE V
Sbjct: 179 DVKIIP---------PGAELPDDFEVNEDMDPEEIV 205
>gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7]
Length = 359
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 122/231 (52%), Gaps = 15/231 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV G+ A ++E +++L GY+G+++ TPM T+I I A + V+G+ G+ +R
Sbjct: 4 ERKFVQQGLNRARMSEYFSKQLERAGYAGMQINRTPMGTQITIFAEKPGMVIGKGGKSVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LTS + + +++ V L A A + L G R+A + LR IM
Sbjct: 64 NLTSDLNNFYDLDNPQIDVQGVGVPE--LNAQLMASRIASALERGWYFRKAAHSTLRRIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GC +++SGKL R++ K +GY+V +G+P E + + + + G +G K++
Sbjct: 122 GAGALGCRIVLSGKLTGPRSRIEKIVEGYIVHAGKPAEEIVHTGFATAVRKLGTIGCKIQ 181
Query: 188 IMLSWDPNGKQGPTTPLPD---LVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
I+L P T LPD LV + +P+ E +PT + D E+P V
Sbjct: 182 IVL---------PDTTLPDVFNLVEVAAPEPVIEAPEPTAGSAD-EMPGSV 222
>gi|433590200|ref|YP_007279696.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|448332394|ref|ZP_21521638.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
gi|433304980|gb|AGB30792.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|445627498|gb|ELY80822.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
Length = 316
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 118/216 (54%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ P LPD ++ D EE V
Sbjct: 179 DVKIIP---------PGAELPDDFEVNEDMDPEEIV 205
>gi|433638927|ref|YP_007284687.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
gi|433290731|gb|AGB16554.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
Length = 314
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 122/224 (54%), Gaps = 11/224 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P +E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPADEVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATD 228
VKI+ P LPD + D E V + A +
Sbjct: 179 DVKIIP---------PGAELPDDFHVEEGLDPEAVVPDAVEANE 213
>gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|17367830|sp|Q9V1U1.1|RS3_PYRAB RecName: Full=30S ribosomal protein S3
gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|380741079|tpe|CCE69713.1| TPA: 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
Length = 210
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/211 (35%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +++ +++ N L A QA + L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 SNGARGVEIRISGKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + I EEE
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEE 203
>gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
Length = 207
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 12/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N L A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GV+G+KV
Sbjct: 122 RNGARGVEIRLSGKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVA 181
Query: 188 IMLSWDPNGKQGPTTPLPDLV-TIHSPKDEE 217
IM P LPD + I P +EE
Sbjct: 182 IM---------PPEARLPDEIEIIEKPLEEE 203
>gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5]
gi|189045017|sp|A4FWB6.1|RS3_METM5 RecName: Full=30S ribosomal protein S3
gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5]
Length = 211
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + K + +E+ ++V N L + L G+ RR + +R +M
Sbjct: 63 ELTETLAKEYAVKNPQIEV--KQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VK
Sbjct: 121 GSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHS 212
IM P LPD +TI S
Sbjct: 181 IM---------KPDVTLPDEITILS 196
>gi|375083288|ref|ZP_09730314.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
gi|374742019|gb|EHR78431.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
Length = 207
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 116/211 (54%), Gaps = 11/211 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + + ++E L +EL GY G++++ TP+ T+++I A R V+G GR+IR
Sbjct: 4 ERYFIKESIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFAERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT +++++F +E+ E++ N A QA L L G+ RRA Y +R IM
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYFNAKVQATRLAQALERGVHFRRAAYAAIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G E+ +SGKL +RAKS++F GY+ G P + LL+ GVLG+KV
Sbjct: 122 NNGARGVEIRISGKLTGERAKSVRFYQGYIAKVGNPAETLVSRGYAQALLKLGVLGVKVS 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
IM P LPD + I EEE
Sbjct: 182 IM---------PPDARLPDEIEIIEKPVEEE 203
>gi|448578195|ref|ZP_21643630.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
gi|445726736|gb|ELZ78352.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
Length = 298
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 117/213 (54%), Gaps = 11/213 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VKI+ P LPD + D E
Sbjct: 179 TVKIIP---------PGARLPDDFEVEEDADPE 202
>gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21]
gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21]
Length = 299
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLENELERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ + VE+ ++V+ L A + L G+ RR Y LR IM
Sbjct: 63 SITQNLKTGYGLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P ++ V L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACAKFSDGYIKKCGEPSIRFVRHGFATVQLKPGVLGINVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD V I
Sbjct: 181 IMP---------PDVVLPDKVDI 194
>gi|262401161|gb|ACY66483.1| putative 40S ribosomal protein RPS3 [Scylla paramamosain]
Length = 66
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/66 (78%), Positives = 58/66 (87%)
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNE 166
YKL+GGLAVRRACYGVL FIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG+P
Sbjct: 1 YKLVGGLAVRRACYGVLCFIMESGAKGCEVVVSGKLRGQRAKSMKFTDGLMIHSGEPRRH 60
Query: 167 YIDSAV 172
Y+D+AV
Sbjct: 61 YVDAAV 66
>gi|448386095|ref|ZP_21564303.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
gi|445655993|gb|ELZ08835.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM 11522]
Length = 312
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 117/216 (54%), Gaps = 11/216 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IME+GA G E+++SGK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMEAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAETVVDHGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
VKI+ P LPD + D EE V
Sbjct: 179 DVKIIP---------PGAELPDDFEVSEDMDPEEIV 205
>gi|409731018|ref|ZP_11272568.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|448724776|ref|ZP_21707281.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|445784985|gb|EMA35781.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
Length = 366
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 125/231 (54%), Gaps = 16/231 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+E+ TPM T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFAEELGRAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTTELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRDEKFNRGYIKHNGEPSKDIVDRGNGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
V+I+ P LPD I E+ LV DIE +V
Sbjct: 179 TVRIIP---------PNAELPDDFRIR-----EDVDVSDLVPEDIESGDEV 215
>gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT]
gi|121694870|sp|A0B9W4.1|RS3_METTP RecName: Full=30S ribosomal protein S3
gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT]
Length = 276
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E L +EL GY G+ + TPM T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGFTKALVDEYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT +++RF+ ++ ++ + V L A A L L G R+A +LR +M
Sbjct: 64 KLTRDLERRFRL--DNPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+SGA GCE+++SGKL R++ KF GY+ SG+P E +D+ + + G +G +V+
Sbjct: 122 DSGALGCEIVISGKLTGPRSRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQVR 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHS 212
I+ P LPD I++
Sbjct: 182 IVP---------PGAVLPDDFQINA 197
>gi|256810641|ref|YP_003128010.1| 30S ribosomal protein S3 [Methanocaldococcus fervens AG86]
gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
Length = 207
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + ++E +EL+ GYS ++R TP+ T+I I A + V+G +G RIR
Sbjct: 3 ERTFVKENTTKLLIDEYFKKELSRAGYSHCDIRKTPIGTKITIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + F + +++ + V N L A A+ + L GL RR + +R +M
Sbjct: 63 ELTKTLAEEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG VI+SGKL +RA++ KF GYM G+P E +D + GV+G+ VK
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IMR---------PDVLLPDEIII 194
>gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
Length = 314
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 110/199 (55%), Gaps = 11/199 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A L+E +L+ GY G+E+ TPM T+I++ + + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFVKASLDEYFANQLSRAGYGGMEINRTPMGTQIVVYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT V + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDVGRLYNL--DNPQIDAQEVKRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGA GCE+I+SGK+ R++ K +GY+ +G+PV++ +D + + G +G KV+
Sbjct: 122 NSGALGCEIILSGKVTGARSRVEKMVNGYIKHAGKPVDDIVDEGFAVAVKKLGTIGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPD 206
I+ P LPD
Sbjct: 182 IIH---------PGAVLPD 191
>gi|399577352|ref|ZP_10771105.1| rps3 protein [Halogranum salarium B-1]
gi|399237735|gb|EJN58666.1| rps3 protein [Halogranum salarium B-1]
Length = 309
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 117/206 (56%), Gaps = 11/206 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +Q+RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITRELQERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E++++GK+ R++ KF GY+ +G+P + +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLAGKVTGARSRIEKFNRGYIKHNGEPADTVVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTI 210
VKI+ P G Q LPD I
Sbjct: 179 TVKII----PPGAQ-----LPDDFAI 195
>gi|313125796|ref|YP_004036066.1| 30S ribosomal protein S3 [Halogeometricum borinquense DSM 11551]
gi|448285635|ref|ZP_21476876.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|445576271|gb|ELY30728.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
Length = 310
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 116/213 (54%), Gaps = 11/213 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTKALETRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VKI+ P LPD I D E
Sbjct: 179 TVKIIP---------PGAKLPDDFEIEEDADVE 202
>gi|224154183|ref|XP_002337443.1| predicted protein [Populus trichocarpa]
gi|222839282|gb|EEE77619.1| predicted protein [Populus trichocarpa]
Length = 73
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/56 (98%), Positives = 55/56 (98%)
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 2 KGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 57
>gi|435852132|ref|YP_007313718.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
gi|433662762|gb|AGB50188.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
Length = 304
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A L+E ++L GY G+EV TPM T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVHEGYVKASLDEYFAKQLNRAGYGGMEVNRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDIDRMYDL--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++S K GY+ +G+P + +D + + G LG KV+
Sbjct: 122 NAGALGCEIVISGKLTGSRSRSEKIVQGYIKHAGKPAEDIVDEGFAVAVKKLGTLGCKVR 181
Query: 188 IM 189
I+
Sbjct: 182 II 183
>gi|448592785|ref|ZP_21651832.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
gi|445730811|gb|ELZ82398.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
Length = 300
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 122/221 (55%), Gaps = 14/221 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIH---SPKDEEEYVKP 222
VKI+ P LPD + P+ E++ +P
Sbjct: 179 TVKIIP---------PGARLPDDFEVEEDAEPEAVEQFEEP 210
>gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3 [Methanosphaerula palustris E1-9c]
gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c]
Length = 234
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+GV + L R+L GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGVRKVRVERFLLRDLKRAGYGGMDIARTPLGTQVTIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + +E+ ++V N A AE L L G R+A V+R +M
Sbjct: 64 QLTQDLATTYGIESPQIEV--QQVQNPNYNAQIMAERLANALERGWYFRKAGSNVVRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCEV++SGKL RA+ KF +GY+ SG+P ++ + + G +G++VK
Sbjct: 122 ESGALGCEVVLSGKLTGARARVQKFTEGYIKHSGEPSITIVEKGYAIAIKKLGTIGVQVK 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
I+ P+ K + D+ P ++EE
Sbjct: 182 II---PPDAKLPDQFEILDVKKPEIPAEQEE 209
>gi|448611741|ref|ZP_21662171.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
gi|445742502|gb|ELZ93996.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
Length = 299
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 117/213 (54%), Gaps = 11/213 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VKI+ P LPD + D E
Sbjct: 179 TVKIIP---------PGAKLPDDFEVEEDADPE 202
>gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP6]
gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP6]
Length = 278
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 108/185 (58%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S ++KFVA+G+ A +NE L EL GY G+++ TPM T+I + A + V+G+ G+
Sbjct: 1 MSVEKKFVAEGITKALVNEYLADELERAGYGGMQMNRTPMGTQITVYAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T + +RF ++ ++ + V L A L L G R+A ++R
Sbjct: 61 LIRKITRDLDRRFHL--DNPQIDVQDVGRGDLNGRVVANRLASSLERGWYFRKAGQSMMR 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+M++GA GCE+++SGKL R+++ KF GY+ SG+P + +D + + GV+G
Sbjct: 119 RVMDAGALGCEIVISGKLTGPRSRTEKFIAGYIKHSGKPAIDLVDRGYSVAVKKLGVIGC 178
Query: 185 KVKIM 189
+V+I+
Sbjct: 179 QVRII 183
>gi|410670345|ref|YP_006922716.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
gi|409169473|gb|AFV23348.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
Length = 310
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 16/230 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E ++L + GY G+E+ TPM T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGYVKASMDEYFAKQLNKAGYGGMELNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + + ++ ++ A++V L A A L + G R+A + +R IM
Sbjct: 64 KLTRDIDRMYDI--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRKAGHNTIRAIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA GCE+++SGKL R++ K GY+ +G+PV++ +D + + G LG KV+
Sbjct: 122 NAGALGCEIVISGKLTGARSRVEKIVQGYIKHAGKPVDDIVDEGFAVAVKKLGTLGCKVR 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKD--EEEYVKPTLVATDIEVPIQV 235
I+ P LPD + KD EE V+ +V+ D + I+
Sbjct: 182 IIP---------PGAVLPDSFHL---KDIAEEPKVEAAVVSKDAKAGIKT 219
>gi|389848011|ref|YP_006350250.1| 30S ribosomal protein S3 [Haloferax mediterranei ATCC 33500]
gi|448618108|ref|ZP_21666453.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|388245317|gb|AFK20263.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|445747663|gb|ELZ99118.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
Length = 300
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 114/196 (58%), Gaps = 6/196 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGP 200
VKI+ P G Q P
Sbjct: 179 TVKII----PPGAQLP 190
>gi|448730383|ref|ZP_21712691.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
gi|445793551|gb|EMA44123.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
Length = 372
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+E+ TPM T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
VKI+ P LPD I D
Sbjct: 179 TVKIIP---------PDAELPDDFRIQEDVD 200
>gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
gi|171460867|sp|A6UWU3.1|RS3_META3 RecName: Full=30S ribosomal protein S3
gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
Length = 208
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +L GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIKENVMETLVDEYLKNKLPRAGYSHMDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + ++ N ++ +++ + L A A+ + L G+ RR + +R +M
Sbjct: 63 ELTETIATKYGV--NKPQIEVKQIESPDLDAGVVAQKIASSLERGMHFRRVAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
GAKG VIVSGKL +R+++ K+ +GYM G+P E +D + L+ GV+G+ VK
Sbjct: 121 AQGAKGVVVIVSGKLTGERSRTEKYMEGYMKHCGEPSEELVDQCHKIAKLKLGVVGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IM---------PPEITLPDEIVI 194
>gi|333987673|ref|YP_004520280.1| 30S ribosomal protein S3 [Methanobacterium sp. SWAN-1]
gi|333825817|gb|AEG18479.1| ribosomal protein S3 [Methanobacterium sp. SWAN-1]
Length = 315
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 113/214 (52%), Gaps = 11/214 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLETQLERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+T ++ + EN ++ ++V L A + L G+ RR Y LR IM
Sbjct: 63 SITQNLKNDYGL-ENP-QVEVKEVEVPELNPKIMAHKIANMLQRGMHFRRVAYTALRRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA+G EV +SGK+R R+ KF DGY+ G+P N+++ V L+ GVLGI V+
Sbjct: 121 GAGAQGVEVTISGKIRGSRSACSKFTDGYIKKCGEPANKHVRKGFATVQLKPGVLGIYVR 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
IM P LPD V I + EE V+
Sbjct: 181 IMP---------PGILLPDKVDIKDIEIEEPAVE 205
>gi|448415413|ref|ZP_21578213.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
gi|445681071|gb|ELZ33512.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
Length = 343
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T ++ RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTKELENRFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+I++GK+ R++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIILAGKVTGARSRVEKFNRGYIKHNGEPAQSIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
VKI+ P LPD I D E
Sbjct: 179 NVKIIP---------PGAKLPDDFEIEDDADPE 202
>gi|386001179|ref|YP_005919478.1| 30S ribosomal protein S3 [Methanosaeta harundinacea 6Ac]
gi|357209235|gb|AET63855.1| 30S ribosomal protein S3P [Methanosaeta harundinacea 6Ac]
Length = 302
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 20/227 (8%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E L++EL+ GY G+ + TPM +I + A + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFTKALVHEYLSKELSRAGYGGMTMNRTPMGIQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT + + F+ ++ ++ + V L A A L L G R+A LR +M
Sbjct: 64 KLTRDLDRNFRL--DNPQIDVQDVGKAELNAQVVANRLASSLERGWYFRKAGQTTLRRVM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
ESGA GCE+I+SGKL R++ KF GY+ SG+P E +D + + G +G +V+
Sbjct: 122 ESGALGCEIILSGKLTGPRSRVEKFLSGYVKHSGKPSQEIVDHGYAVAVKKLGTIGCQVR 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQ 234
I+ PD V P D E V P+ + +P++
Sbjct: 182 IV--------------PPDAV----PPDRFEIVPPSKEQAEEALPVE 210
>gi|448583476|ref|ZP_21646832.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
gi|445729705|gb|ELZ81300.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
Length = 302
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 TVKIIP---------PGAKLPD 191
>gi|448565521|ref|ZP_21636388.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
gi|445715265|gb|ELZ67021.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
Length = 303
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 114/202 (56%), Gaps = 11/202 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPD 206
VKI+ P LPD
Sbjct: 179 TVKIIP---------PGAKLPD 191
>gi|448545980|ref|ZP_21626307.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|448548054|ref|ZP_21627398.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|448557077|ref|ZP_21632512.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
gi|445703326|gb|ELZ55257.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|445714756|gb|ELZ66514.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|445714946|gb|ELZ66703.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
Length = 302
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|448606201|ref|ZP_21658780.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445739618|gb|ELZ91125.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
Length = 302
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|433420031|ref|ZP_20405417.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
gi|432199288|gb|ELK55479.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
Length = 303
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|448623086|ref|ZP_21669735.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
gi|445753594|gb|EMA05011.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
Length = 303
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|156937383|ref|YP_001435179.1| 30S ribosomal protein S3 [Ignicoccus hospitalis KIN4/I]
gi|172044464|sp|A8AA20.1|RS3_IGNH4 RecName: Full=30S ribosomal protein S3
gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
Length = 241
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 9/214 (4%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + +++E L + GYS VE++ TPM T +II A R+ ++G +G+ I+
Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
++T V+++ F P V + KV L A A L L G RRA Y LR IM
Sbjct: 69 QITKVLEEWFGIPNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRRIM 126
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G +V VSGKLR +RA+ K+ G + SG V D A+ HVLL+ GV G++V
Sbjct: 127 GAGAIGAQVKVSGKLRGERARFEKYIAGKVYKSGNQVVRLTDRAIAHVLLKVGVEGVEVI 186
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
I K+ D V I SP++ E V+
Sbjct: 187 I-------SKKSEEERPDDEVRIKSPEEVNEIVQ 213
>gi|448569076|ref|ZP_21638488.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|448600505|ref|ZP_21656001.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
gi|445725226|gb|ELZ76851.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|445735222|gb|ELZ86774.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
Length = 303
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2]
gi|448290683|ref|ZP_21481829.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2]
gi|445578054|gb|ELY32469.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
Length = 304
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 110/185 (59%), Gaps = 2/185 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TPM T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA G E+++SGK+ R++ KF GY+ +G+P E +D +++ G +G+
Sbjct: 119 RIMDAGALGAEIVLSGKVTGARSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGV 178
Query: 185 KVKIM 189
VKI+
Sbjct: 179 TVKII 183
>gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7]
gi|189045018|sp|A6VGZ0.1|RS3_METM7 RecName: Full=30S ribosomal protein S3
gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7]
Length = 211
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + N+ ++ ++V + L + L G+ R+ + +R +M
Sbjct: 63 ELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VK
Sbjct: 121 GSGAKGVSIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHS 212
IM P LPD +TI S
Sbjct: 181 IM---------KPDVSLPDEITILS 196
>gi|448735129|ref|ZP_21717346.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
gi|445798742|gb|EMA49133.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
Length = 372
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 115/211 (54%), Gaps = 11/211 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+++ TPM T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+A + +
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRKAGHTTID 118
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM++GA+G E+ ++GK+ R+++ KF GY+ +G+P +D +++ G +G+
Sbjct: 119 RIMDAGARGAEITLNGKVTGARSRNEKFNRGYIKHNGEPAQSIVDRGDGVAVMKLGTIGV 178
Query: 185 KVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
V+I+ P LPD I D
Sbjct: 179 TVRIIP---------PDAELPDDFRIQEDVD 200
>gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6]
gi|226697730|sp|A9A9Q9.1|RS3_METM6 RecName: Full=30S ribosomal protein S3
gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6]
Length = 211
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 108/205 (52%), Gaps = 11/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + N+ ++ ++V + L + L G+ R+ + +R +M
Sbjct: 63 ELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ GV+G+ VK
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHS 212
IM P LPD +TI S
Sbjct: 181 IM---------KPDVSLPDEITILS 196
>gi|424812835|ref|ZP_18238075.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
gi|339757057|gb|EGQ40640.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
Length = 366
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 102/190 (53%), Gaps = 6/190 (3%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
QI ++++FV G+ L++ L +EL GY+G + TP T+I+I A + ++G G
Sbjct: 17 QIVQEKQFVQQGIRRVNLDDFLAKELEGSGYAGSTIERTPTSTKIVITAEKPGLIIGRGG 76
Query: 64 RRIRELTSVVQKRFKFPENSVELY--AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
RIRELTS V+ F F + +E+ E +N + A AE L G + +R Y
Sbjct: 77 SRIRELTSDVEDEFGFEDPQIEVNEIEEPDSNAQVVANNMAEWLEK----GGSAKRVGYT 132
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
LR + E+G G ++ VSGKL R ++ KF GY+ G +E +D R + G
Sbjct: 133 YLRRVRETGVIGAQIEVSGKLSGNRGRTEKFSFGYVKRCGDTADEQVDRGYRLARTKPGA 192
Query: 182 LGIKVKIMLS 191
+G+KV+IM S
Sbjct: 193 IGVKVRIMDS 202
>gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3 [Sulfolobus solfataricus P2]
gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2]
gi|384434231|ref|YP_005643589.1| 30S ribosomal protein S3 [Sulfolobus solfataricus 98/2]
gi|11134364|sp|Q9UXA0.1|RS3_SULSO RecName: Full=30S ribosomal protein S3
gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2]
gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2]
gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2]
Length = 229
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 6/200 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L ++ Y+GVEV TP+ T +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L + +K F EN ++ V N L A A L L G RRA + +R IM
Sbjct: 65 QLAQIFEKVFGL-ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G E+I+SGKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V
Sbjct: 123 NAGALGAEIIISGKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVV 182
Query: 188 IM----LSWDPNGKQGPTTP 203
I + N K+ P+ P
Sbjct: 183 ITKPLKIEDKINLKESPSVP 202
>gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5]
gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5]
Length = 187
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 98/169 (57%), Gaps = 2/169 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
LNE L R+L Y + TP+ T++I+ A V+G KG I+ + V+++ F
Sbjct: 3 LNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGIE 62
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+++ +V N+ L A A + L+ G+ RRA L IM +GA+G E+++SG
Sbjct: 63 NPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISG 120
Query: 141 KLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
KL +QR ++ KF GY+ SG+P E +D A+ HVLL+ G+ G+KV+IM
Sbjct: 121 KLTSQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIM 169
>gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2]
gi|340624714|ref|YP_004743167.1| 30S ribosomal protein S3 [Methanococcus maripaludis X1]
gi|61215571|sp|Q6LXE7.1|RS3_METMP RecName: Full=30S ribosomal protein S3
gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2]
gi|339904982|gb|AEK20424.1| 30S ribosomal protein S3P [Methanococcus maripaludis X1]
Length = 211
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 105/205 (51%), Gaps = 11/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++ + TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + +E+ ++V N L + L G+ R+ + +R +M
Sbjct: 63 ELTETLATEYSVKNPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGAKG +IVSGKL +R+++ KF DGYM G+P ++ + + L+ G++G+ VK
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHS 212
IM P LPD + I S
Sbjct: 181 IMR---------PDVSLPDEIVISS 196
>gi|294880038|ref|XP_002768878.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871826|gb|EER01596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 106
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 57/60 (95%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
>gi|222064015|emb|CAQ86670.1| putative ribosomal protein S3 [Histomonas meleagridis]
Length = 89
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 66/89 (74%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
M++GA+GCEV++SGK+R+ RA +MKF++GYMV SG +Y+ AV H+ ++Q V+GI+V
Sbjct: 1 MDAGARGCEVVISGKMRSARAAAMKFREGYMVKSGDVSQKYVLKAVGHIPMKQAVVGIRV 60
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKD 215
IML+ DP G GP P PD++ +H KD
Sbjct: 61 LIMLAHDPQGITGPREPQPDVIKVHEAKD 89
>gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
gi|152060866|sp|A2BMC5.1|RS3_HYPBU RecName: Full=30S ribosomal protein S3
gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 113/214 (52%), Gaps = 12/214 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L + GY+GV++ P+ T +II A R ++G +G IR
Sbjct: 5 KRYFIKKAMVQTQIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++ + F ++ ++ +V N L A A + L G RR + R ++
Sbjct: 65 QLAAIFEHEFGL--SNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVL 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G ++++SGKLR +RA+ K + G + ++G V +D AV HV L+ GVLGI+V
Sbjct: 123 NAGAIGVQIVISGKLRTERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVM 182
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
I+ P+ D V I P++ +E+++
Sbjct: 183 IVKPAKPS----------DYVRIKQPEEVKEFIE 206
>gi|9967236|dbj|BAB12320.1| hypothetical protein [Macaca fascicularis]
Length = 83
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
+II ATRT+N+LGEKGR IRELT+VVQK F FPE SVELYA+KV RG IAQAESLRY
Sbjct: 1 MIILATRTENILGEKGRWIRELTAVVQKTFGFPEGSVELYADKVATRGR-DIAQAESLRY 59
Query: 108 KLLGGLAVRRA 118
K LGGLAVRRA
Sbjct: 60 KFLGGLAVRRA 70
>gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3 [Sulfolobus acidocaldarius DSM 639]
gi|449066618|ref|YP_007433700.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449068892|ref|YP_007435973.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363394|sp|Q4JB46.1|RS3_SULAC RecName: Full=30S ribosomal protein S3
gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
gi|449035126|gb|AGE70552.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449037400|gb|AGE72825.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
Length = 231
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 99/181 (54%), Gaps = 2/181 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L V++K F + + A N L A A L L G RRA + +R IM
Sbjct: 65 QLAQVLEKFFGLENPQITVTA--AENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
SGA G EVIVSGKL ++RAK K K+G + SGQ + + ID A+ +L+ GV G++V
Sbjct: 123 SSGAVGAEVIVSGKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVV 182
Query: 188 I 188
I
Sbjct: 183 I 183
>gi|65051|emb|CAA24702.1| ribosomal protein S1 [Xenopus laevis]
Length = 125
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 56/69 (81%)
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLP 205
RAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML DP+GK GP PLP
Sbjct: 19 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPKDPSGKIGPKKPLP 78
Query: 206 DLVTIHSPK 214
D V + SP+
Sbjct: 79 DHVALLSPR 87
>gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB]
gi|171460840|sp|A6UQ49.1|RS3_METVS RecName: Full=30S ribosomal protein S3
gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB]
Length = 211
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 107/205 (52%), Gaps = 11/205 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R F+A+ V ++E +L GYS +E++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIAENVSETLIDEYFKGKLVRAGYSHLELKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + + +K +E+ + + L + L G+ R+ + +R +M
Sbjct: 63 ELTDTLTEVYKVENPQIEV--KPLETPDLDPAIVGHKIAASLEKGMHFRKTAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG +I+SGKL +R+++ KF DGYM G+P E + + + L+ G++G+ VK
Sbjct: 121 AAGAKGVAIIISGKLSGERSRTEKFMDGYMKHCGEPAEELVIKSHQLAKLKLGIVGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHS 212
IM P LPD + I S
Sbjct: 181 IMR---------PDVSLPDEIIILS 196
>gi|347524202|ref|YP_004781772.1| 30S ribosomal protein S3 [Pyrolobus fumarii 1A]
gi|343461084|gb|AEM39520.1| ribosomal protein S3 [Pyrolobus fumarii 1A]
Length = 242
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 112/214 (52%), Gaps = 12/214 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ FV + A+++E L + GY+GV + P+ + I A R ++G G+ IR
Sbjct: 5 KKYFVQKALREAKIDEYLAKRFYRAGYAGVRIIELPIGHRVYIYAERPGMIIGRGGQTIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
EL + +K F N+ ++ +V L A A + L G RR +LR I+
Sbjct: 65 ELQYIFEKHFGL--NNPQVSVRRVEEPDLNARVVASRIAVLLERGAHYRRVANVMLRRIL 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G E+++SGKLR +RA+ K + G + S+G V +D AV HVLL+ GV GI+VK
Sbjct: 123 AAGAIGAEIVISGKLRTERARYEKLRAGKVYSTGYQVEYMVDRAVMHVLLKPGVYGIEVK 182
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
I+ P P D V I +P++ +E V+
Sbjct: 183 IV---------KPVRP-ADYVRIKTPEEVKEIVE 206
>gi|429217541|ref|YP_007175531.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
gi|429134070|gb|AFZ71082.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
Length = 247
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + A+++E L + GYSGV + + + T I I A R ++G KG IR
Sbjct: 5 KKYFLDQAMLRAKIDEYLAQNFYTAGYSGVHIIQSGLGTRIHIYAERPALIIGRKGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L V QK F +V++ + +N L A QA + L G RR LR I+
Sbjct: 65 RLQGVFQKVFGL--ENVQVTVSQPDNTELDARIQAFRVARSLEMGYHFRRVAMATLRRII 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GA G E+++SGKL +RAK K + G ++ +G V++Y+D AV H L QG+ G+++
Sbjct: 123 EAGAIGAEIVISGKLTNERAKFEKLQMGKVIKTGDIVDQYVDKAVAHAKLPQGIYGVRII 182
Query: 188 IM 189
I+
Sbjct: 183 IV 184
>gi|305662597|ref|YP_003858885.1| 30S ribosomal protein S3 [Ignisphaera aggregans DSM 17230]
gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
Length = 209
Score = 102 bits (255), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 105/184 (57%), Gaps = 2/184 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ K F+ G+ ++E L + GY+GV++ TP+ T +II A R ++G +G+
Sbjct: 2 VNIKNYFIEQGIKKVAVDEYLASKFWRAGYAGVDLIRTPLGTRVIIYAARPGLIIGRRGQ 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
+R + V++K F EN ++ + N L A A ++ L G+ RRA + LR
Sbjct: 62 TLRTIQLVIEKLFGI-ENP-QITVVEAENPDLNARIVAFNIALALERGIHFRRAGFIALR 119
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
+M +GA GCE+++SGKL A+RA+ K K G + SG+ +D AV HVLL+ G+ GI
Sbjct: 120 RVMAAGAIGCEIVISGKLVAERARYEKLKMGKVYKSGEQSFRLVDRAVAHVLLKPGMYGI 179
Query: 185 KVKI 188
+V I
Sbjct: 180 EVLI 183
>gi|344256720|gb|EGW12824.1| 40S ribosomal protein S3 [Cricetulus griseus]
Length = 94
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 53/67 (79%)
Query: 150 MKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVT 209
MKF DG M+ G PVN Y+D+A+RHVLLRQGVLGIKVK+ML WDP+GK GP PLPD V+
Sbjct: 1 MKFVDGLMIHCGDPVNYYVDTAMRHVLLRQGVLGIKVKVMLPWDPSGKIGPKKPLPDHVS 60
Query: 210 IHSPKDE 216
PKDE
Sbjct: 61 TVEPKDE 67
>gi|336121751|ref|YP_004576526.1| 30S ribosomal protein S3 [Methanothermococcus okinawensis IH1]
gi|334856272|gb|AEH06748.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
Length = 219
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 108/203 (53%), Gaps = 11/203 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E L +L GYS ++++ TP+ T I + A + V+G KGR ++
Sbjct: 3 ERAFVKENVVETLVDEYLKNKLPRAGYSHMDIKKTPVGTRITVFAEKPGFVIGRKGRMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
ELT + ++ +E+ +++ N L A+ + L G+ RR + +R +M
Sbjct: 63 ELTETIANKYGVENPQIEV--KQIQNPDLDPEVVAQKIASSLERGMHFRRVAHSAVRRVM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GAKG +I+SGKL +R+++ KF +GYM G+P + A + L+ G++G+ VK
Sbjct: 121 GAGAKGIVIIISGKLTGERSRTEKFMEGYMKHCGEPSEVLVKKAHKLAKLKLGIIGVTVK 180
Query: 188 IMLSWDPNGKQGPTTPLPDLVTI 210
IM P LPD + I
Sbjct: 181 IM---------PPEIVLPDEIVI 194
>gi|332796534|ref|YP_004458034.1| 30S ribosomal protein S3 [Acidianus hospitalis W1]
gi|332694269|gb|AEE93736.1| ribosomal protein S3 [Acidianus hospitalis W1]
Length = 227
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 106/203 (52%), Gaps = 3/203 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ K+ F+ + L+E L ++ Y+GV++ TPM T III A R ++G+ G+
Sbjct: 2 VNIKQYFLQKSMTKVMLDEYLAKQFYNAEYAGVDIIKTPMGTRIIIYAGRPAMIIGKGGK 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
I++L V +K F EN ++ V+N L A A L L G RRA + +R
Sbjct: 62 TIKQLAQVFEKFFNL-ENP-QITVTNVDNPELNARVMAFRLAVALEKGYHFRRAAFITIR 119
Query: 125 FIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGI 184
IM +GA G EV+VSGK+ ++RAK K K+G + +G + ID AV L+ G+ G+
Sbjct: 120 RIMNAGALGAEVVVSGKITSERAKYEKLKEGTVYKTGNSLETMIDRAVAIATLKPGIYGV 179
Query: 185 KVKIMLSWDPNGK-QGPTTPLPD 206
++ I P K TP P
Sbjct: 180 EIIIAKPLRPVDKISFKETPAPS 202
>gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6]
gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6]
Length = 246
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 14/200 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV D + ++ E + +E+ G+ GV++ TP+ T++ + R V+G+ GRRIR
Sbjct: 4 ERKFVEDRIKKLKVKEWMIQEVRNAGFGGVDITRTPLGTQVTLFVERPGLVIGKGGRRIR 63
Query: 68 ELTSVVQK-RFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
LT +++ + P+ SV+ + N L A A +L G R+A Y L I
Sbjct: 64 ALTERLKEFGIENPQVSVDEIEKPEFNAQLMASLLARALER----GWYFRKAGYRFLYRI 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
ME+GAKGCE+ +SGKL ++RA++ KF G MV +G+P + + + + GVLG+ V
Sbjct: 120 MEAGAKGCEIEISGKLTSERARTEKFLAGTMVHTGEPASSMVRKGFDIAIKKLGVLGVTV 179
Query: 187 KIMLSWDPNGKQGPTTPLPD 206
+I+ P LPD
Sbjct: 180 RIIP---------PDVELPD 190
>gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284997900|ref|YP_003419667.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|385773369|ref|YP_005645935.1| 30S ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
gi|385776007|ref|YP_005648575.1| 30S ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
Length = 216
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 95/169 (56%), Gaps = 2/169 (1%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+++E L ++ Y+GVEV TP+ T +II A R ++G GR I++L + +K F
Sbjct: 4 KIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFGL 63
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
EN ++ V N L A A L L G RRA + +R IM +GA G E+I+S
Sbjct: 64 -ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIIS 121
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V I
Sbjct: 122 GKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVI 170
>gi|359416222|ref|ZP_09208574.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358033425|gb|EHK01978.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 351
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 99/183 (54%), Gaps = 2/183 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G RI
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGFDLQRTPTSTKIVVEAQRPGLVIGRGGSRI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
RELTS +++ F F +E+ ++ + A A+S+ L G V+R Y +R +
Sbjct: 62 RELTSALEEEFDFENPQIEVN--EIEDADGDAQVVADSIADWLEKGGHVKRVGYTYVRRM 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
E+G G EV ++GKL R ++ KF GY+ G E + + + G +G+KV
Sbjct: 120 KEAGVIGAEVEITGKLSGNRGRTEKFSFGYVKRCGNTSKENVQKGYQLARTKPGAIGVKV 179
Query: 187 KIM 189
++M
Sbjct: 180 RVM 182
>gi|385805558|ref|YP_005841956.1| 30S ribosomal protein S3 [Fervidicoccus fontis Kam940]
gi|383795421|gb|AFH42504.1| 30S ribosomal protein S3P [Fervidicoccus fontis Kam940]
Length = 251
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 103/182 (56%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L ++ GY+GV+V TP+ T ++IRA R ++G +G+ I+
Sbjct: 5 KRYFIEKNMSVVKVDEYLAKQFYRAGYAGVDVYRTPLGTRVVIRAERPAFIIGRRGQTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L++V + F EN ++ V N L A A L L G R+ + LR IM
Sbjct: 65 TLSNVFENYFGL-ENP-QITVMPVENPDLNARVVAFRLAVSLERGFHFRKLAFAALRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G E+I+SGK+ ++RA+ KF+ G + +G+ +D AV H LL+ G+ G+KV
Sbjct: 123 AAGAAGAEIIISGKITSERARYEKFRAGKIYKTGEQATYIVDKAVAHALLKPGIYGVKVI 182
Query: 188 IM 189
I+
Sbjct: 183 IV 184
>gi|408404342|ref|YP_006862325.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364938|gb|AFU58668.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 222
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TP+ I I TR V+G KG I++L + ++++F
Sbjct: 2 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 61
Query: 80 --PENSV-ELYAEKVNNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCE 135
P+ SV E+ ++N +C IAQ + G A RRA L IM +GA G E
Sbjct: 62 QNPQISVLEVTNPELNPHIMCNRIAQL------IERGTAFRRAAMWSLNTIMNAGALGVE 115
Query: 136 VIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
V++SGKLR +RA K G + SG + + + V HVL + G++GI+++I
Sbjct: 116 VVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQLRI 168
>gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis]
Length = 236
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 97/173 (56%), Gaps = 10/173 (5%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TP+ I I TR V+G KG I++L + ++++F
Sbjct: 16 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 75
Query: 80 --PENSV-ELYAEKVNNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCE 135
P+ SV E+ ++N +C IAQ + G A RRA L IM +GA G E
Sbjct: 76 QNPQISVLEVTNPELNPHIMCNRIAQL------IERGTAFRRAAMWSLNTIMNAGALGVE 129
Query: 136 VIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
V++SGKLR +RA K G + SG + + + V HVL + G++GI+++I
Sbjct: 130 VVISGKLRTERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQLRI 182
>gi|284162454|ref|YP_003401077.1| 30S ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
Length = 219
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 14/200 (7%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D + ++ E L E+ G+ GV++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIRDRLIKLKVKEWLKEEVKNAGFGGVDIVRTPLGTQVSLFVERPGLVIGRGGRRIK 63
Query: 68 ELTSVVQKRFK-FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
++Q++ K F ++ +L ++V A A L L G RRA Y L I
Sbjct: 64 ----ILQEKLKEFGLDNPQLSVDEVKRPEFNAQLMATLLARALERGWYFRRAGYRFLYRI 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
ME+GAKGC++ +SGKL ++RA++ KF G +V +G P E +D + + GV G+ V
Sbjct: 120 MEAGAKGCQIEISGKLVSERARTEKFTAGTIVHTGDPAYELVDKGFDIAIKKLGVYGVSV 179
Query: 187 KIMLSWDPNGKQGPTTPLPD 206
KI+ P LPD
Sbjct: 180 KII---------PPDVELPD 190
>gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3 [Aeropyrum pernix K1]
gi|6685919|sp|Q9YF78.1|RS3_AERPE RecName: Full=30S ribosomal protein S3
gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
Length = 246
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M T++ K F+ G+ +++E L + E GYS V+V T + T I I A R ++G
Sbjct: 1 MPTKVVKH--FLNQGLLRTKIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIG 58
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+G IR L V Q F P + + E+ N L A QA + + G+ RR +
Sbjct: 59 RRGATIRRLQEVFQTVFGLPNPRIRV--EQPENPMLDARVQAFRIARSIERGIHFRRVAF 116
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
+ IM +GA G E+ +SGKL ++RA+ KFK G + SG V+E +D A + L +G
Sbjct: 117 AAINRIMSNGALGVEITISGKLTSERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKG 176
Query: 181 VLGIKVKIMLSWDP 194
V+G+ V I+ P
Sbjct: 177 VIGVDVIIVKPGKP 190
>gi|389860655|ref|YP_006362895.1| 30S ribosomal protein S3 [Thermogladius cellulolyticus 1633]
gi|388525559|gb|AFK50757.1| ribosomal protein S3 [Thermogladius cellulolyticus 1633]
Length = 228
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 11/210 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ G+ +++ L + GY+GVE+ TP ++I A ++G G IR
Sbjct: 7 KQYFINLGLKKTMIDQFLASYFVDAGYAGVELYKTPTGHRVVIYAEYPGRLIGRGGSVIR 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT++ Q RF +V + V + L A A + L + RR +L+ IM
Sbjct: 67 KLTAIFQTRFGL--ENVNITVSPVTDADLNARVVAFRIVRALEKEIPYRRVMMAMLKRIM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+++SGKLR +RA K + G + +G V+ +D AV LL+ G+ G++V
Sbjct: 125 DAGALGAEIVISGKLRGERATYEKMRTGKIYKAGDLVDYIVDRAVAKTLLKPGIFGVEVI 184
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
I+ P+ PLPD V + K EE
Sbjct: 185 IV---------KPSIPLPDQVELKQLKPEE 205
>gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3 [Thermosphaera aggregans DSM 11486]
gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
Length = 229
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 11/209 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K F++ G+ ++E L + GY+GVEV TP ++I A ++G G I+
Sbjct: 7 KSYFLSYGLKKLMIDEFLANYFKDAGYAGVEVFRTPTGHRVVIYAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT+++Q RF +V + V + L A A + L + RR G+L+ IM
Sbjct: 67 KLTTILQTRFGL--ENVNITVSPVMDPDLNARVVAFRIVRALEKEIPFRRVMMGMLKRIM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+I+SGKLR +RA K + G + +G+PV ID AV LL+ G+ G++V
Sbjct: 125 DAGAVGAEIIISGKLRGERATYEKMRVGKIYKAGEPVEYIIDRAVARALLKPGIYGVEVL 184
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
I+ P LPD V I K E
Sbjct: 185 IV---------KPGIKLPDHVEIKPVKPE 204
>gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
gi|27734524|sp|Q975I7.1|RS3_SULTO RecName: Full=30S ribosomal protein S3
gi|15621418|dbj|BAB65413.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
Length = 225
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 6/215 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KKYFLQRSMTKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPALIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++++ F ++ ++ V N L A A L L G RRA + +R IM
Sbjct: 65 QLAQMLERYFGL--DNPQITVTSVENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVI+SGKL ++RAK K K+G + SG +++ +D AV +L+ GV G+++
Sbjct: 123 NAGALGAEVIISGKLTSERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEIL 182
Query: 188 I---MLSWDP-NGKQGPTTPLPDLVTIHSPKDEEE 218
I M S D ++ P P ++VT+ + EE
Sbjct: 183 ITKPMKSVDKIELREQPKGPGENMVTVTNVSFIEE 217
>gi|297527401|ref|YP_003669425.1| 30S ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
Length = 225
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L + GY+G+E+ TP +II A V+G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVIIYAEYPGRVIGRGGSIIRKLMTIMQTHFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V + V + L A A + L + RR +LR IME+GA G E+I+SG
Sbjct: 79 -ENVNITVSPVPDPDLNARVVAFRIVRALEKEIPYRRVAMAMLRRIMEAGAVGAEIIISG 137
Query: 141 KLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGP 200
KLR++RA+ K K G + +G V+ +D AV LL++GV G++V I+ P
Sbjct: 138 KLRSERARYQKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIVR---------P 188
Query: 201 TTPLPDLVTIHSPKDEE 217
PD V I S K EE
Sbjct: 189 HLKPPDYVEIKSVKPEE 205
>gi|307006559|gb|ADN23564.1| 40S ribosomal protein S3 [Hyalomma marginatum rufipes]
Length = 91
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/65 (69%), Positives = 52/65 (80%)
Query: 152 FKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIH 211
F DG M+ SG+P N+Y+++AVRHVLLRQGVLGIKVKIML DPNGK GP PLPD V+I
Sbjct: 1 FVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLPCDPNGKLGPKRPLPDHVSIM 60
Query: 212 SPKDE 216
PK E
Sbjct: 61 EPKKE 65
>gi|350588289|ref|XP_003357250.2| PREDICTED: hypothetical protein LOC100627821 [Sus scrofa]
Length = 203
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 51/57 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQN 57
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEII+ ATR Q+
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIMLATRNQS 57
>gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484671|dbj|BAJ50325.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
Length = 203
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 100/192 (52%), Gaps = 11/192 (5%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
A++ E L +L + GV + TP+ T + I A R V+G KG+ I+E+T ++K+F
Sbjct: 15 ADIEEYLREKLKNAFFGGVSISFTPLGTRVTIYAMRPSRVIGPKGKVIKEITEALEKQFG 74
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ + +V L AE + L GL RR + ++ IME+GAKG EV +
Sbjct: 75 --VENPVVTVVEVEVPELNPYVMAERIAQDLARGLRYRRVGFWAVKRIMEAGAKGVEVHI 132
Query: 139 SGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQ 198
SGKL + R+++ KF +G+M SG+ Y+ VLL+ G+ G++V I
Sbjct: 133 SGKLTSARSRTEKFTEGFMPKSGELAMNYVLEGKSSVLLKTGLFGVRVLIY--------- 183
Query: 199 GPTTPLPDLVTI 210
P PLP+ + +
Sbjct: 184 PPDAPLPEEIKV 195
>gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 214
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 10/174 (5%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L + + GY G E+ +P+ T I I T+ V+G +G IRELT ++K F+
Sbjct: 11 IDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTENLEKIFELQ 70
Query: 81 ENSVELYAEKV---NNRGLCA-IAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV 136
+ ++ ++ N R +C +AQ + G A RRA + IM SGA G E+
Sbjct: 71 NLQISVFEVEIPEQNARIMCNRVAQT------VARGTAFRRAAMWTVNAIMRSGALGAEI 124
Query: 137 IVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
I++GKLR++R+ + K+KDG + +G P + AV V L+ G+ GI+VKI +
Sbjct: 125 IIAGKLRSERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQVKIAI 178
>gi|218117273|emb|CAQ37764.1| 40S ribosomal protein S3 [Echinorhynchus truttae]
Length = 71
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%)
Query: 57 NVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
V+G+KGRRIREL+SVV KRF + L + KV RGLCA+ QAESLRYKL+ G+AVR
Sbjct: 1 QVVGDKGRRIRELSSVVAKRFNLKPEKLVLLSSKVEQRGLCAMTQAESLRYKLIEGVAVR 60
Query: 117 RACYGVLRFIM 127
RACYGV+RF+M
Sbjct: 61 RACYGVVRFVM 71
>gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3 [Desulfurococcus mucosus DSM 2162]
gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
Length = 222
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 111/217 (51%), Gaps = 12/217 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ ++E L + GY+ VE+ TP ++I A ++G G I+
Sbjct: 7 KSYFLNYGLKKLMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L++++Q RF ++V + V + L A A + L + RR +L+ +M
Sbjct: 67 KLSTILQTRFGL--DNVNVTISPVVDPDLNARVVAFRIVRALEKEIPFRRVIMYMLKRVM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+IVSGKLR +RA K K G + +G+PV +D AV LL+ G+ G++V
Sbjct: 125 DAGAVGAEIIVSGKLRGERATYEKLKAGKVYKAGEPVEYVVDRAVAKALLKPGIFGVEVV 184
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE-EYVKPT 223
I+ P LPD V + + K EE E +KP
Sbjct: 185 IV---------KPNIKLPDHVEVKALKPEEIEQLKPA 212
>gi|170066762|ref|XP_001868214.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167862957|gb|EDS26340.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 222
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 80/163 (49%), Gaps = 52/163 (31%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGE IREL +VV+KRF +EL AEKV R LCAIAQAESL YKL
Sbjct: 43 RTQNVLGESDHHIRELNAVVKKRF------IELNAEKVATRSLCAIAQAESLCYKL---- 92
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 173
I+ G +G G++R EY +A
Sbjct: 93 ------------ILRQGLRG------GRVR---------------------KEYYATAT- 112
Query: 174 HVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
LRQG GI+VKIML WDPNG GP L D V + P+DE
Sbjct: 113 --PLRQGEFGIQVKIMLPWDPNGIFGPKESLSDNVKMVEPEDE 153
>gi|149068839|gb|EDM18391.1| rCG40478, isoform CRA_a [Rattus norvegicus]
Length = 55
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/54 (81%), Positives = 48/54 (88%)
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
MESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQG
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 54
>gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3 [Staphylothermus marinus F1]
gi|152060907|sp|A3DNB3.1|RS3_STAMF RecName: Full=30S ribosomal protein S3
gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1]
Length = 224
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 11/197 (5%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L + GY+G+E+ TP ++I A ++G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLMTIMQTHFGL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V + V + L A A + L + RR +LR +ME+GA G E+I+SG
Sbjct: 79 -ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEAGAVGAEIIISG 137
Query: 141 KLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGP 200
KLR++RA+ K K G + +G V+ +D AV LL++GV G++V I+ P
Sbjct: 138 KLRSERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVIVR---------P 188
Query: 201 TTPLPDLVTIHSPKDEE 217
PD V I S K EE
Sbjct: 189 HLKPPDYVEIKSVKPEE 205
>gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
Length = 223
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 12/217 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ ++E L + GY+ VE+ TP ++I A ++G G I+
Sbjct: 7 KSYFLEYGLKKLMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L++++Q +F ++V + V + L A A + L + RR +L+ +M
Sbjct: 67 KLSTILQNKFGL--DNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+I+SGKLR +RA K K G + +G+PV +D AV LL+ G+ G++V
Sbjct: 125 DAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYMVDRAVVKALLKPGIFGVEVV 184
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE-EYVKPT 223
I+ P +PD V I + K EE E +KP
Sbjct: 185 IV---------KPGIKMPDHVEIKTLKPEELEALKPA 212
>gi|288931516|ref|YP_003435576.1| 30S ribosomal protein S3 [Ferroglobus placidus DSM 10642]
gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
Length = 223
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 108/203 (53%), Gaps = 20/203 (9%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D V + E + E+ G+ G+++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIEDKVKKLMVKEWIVEEVRNAGFGGLDIVRTPLGTQVTLFVERPGLVIGRGGRRIK 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT +K +F ++ ++ ++++ A A L L G R+A Y L IM
Sbjct: 64 ALT---EKLKEFGLDNPQISVDEIDKPEFNAQLMASLLARALERGWYFRKAGYRFLYRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQP----VNEYIDSAVRHVLLRQGVLG 183
E+GAKGCE+ +SGKL ++RA++ KF G ++ +G P V E D A++ + GV G
Sbjct: 121 EAGAKGCEIEISGKLTSERARTEKFIAGTIIHTGDPAITCVREGFDIAIKKL----GVYG 176
Query: 184 IKVKIMLSWDPNGKQGPTTPLPD 206
++V+I+ P LPD
Sbjct: 177 VRVRII---------PPDAELPD 190
>gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304]
gi|6094176|sp|O28360.1|RS3_ARCFU RecName: Full=30S ribosomal protein S3
gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM 4304]
Length = 229
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 12/199 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + + + E + E+ G+ GV++ TP+ T++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
LT +K F + ++ ++V A A L L G RRA Y L IM
Sbjct: 64 ALT---EKLKDFGIENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIM 120
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GAKGCE+ +SGKL ++RA++ KF G +V +G P + + + GVLG+ V+
Sbjct: 121 EAGAKGCEIEISGKLVSERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSVR 180
Query: 188 IMLSWDPNGKQGPTTPLPD 206
I+ P LPD
Sbjct: 181 IIP---------PDVTLPD 190
>gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3 [Acidilobus saccharovorans 345-15]
gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
Length = 238
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ +++E L + GY+GV++ + + T + I A R V+G +G IR
Sbjct: 5 KSYFLRQGLTRVKVDEYLAQNFYTAGYAGVQIVQSGLGTRVHIFAERPALVIGRRGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L +V++K F V++ + +N L A QA + L G RR +R IM
Sbjct: 65 KLQAVLEKVFGL--EGVQVTVSQPDNMELNARVQAFRIARALEMGYHFRRVAMATMRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GA G E+++SGKL +RA+ K + G ++ +G V+ Y D A+ + L G++G++V+
Sbjct: 123 EAGAVGVEIVISGKLSRERARFEKLQAGKVIKTGNVVDVYTDRAIAYAKLPLGIIGVEVR 182
Query: 188 IM 189
I+
Sbjct: 183 II 184
>gi|390938985|ref|YP_006402723.1| 30S ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
gi|390192092|gb|AFL67148.1| ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
Length = 223
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 111/220 (50%), Gaps = 12/220 (5%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ ++E L + GY+ VE+ TP ++I A ++G G I+
Sbjct: 7 KSYFLEYGLKKLMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L++++Q R ++V + V + L A A + L + RR +L+ +M
Sbjct: 67 KLSTILQNRLGL--DNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVM 124
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
++GA G E+I+SGKLR +RA K K G + +G+PV +D AV LL+ G+ G++V
Sbjct: 125 DAGAIGAEIIISGKLRGERATYEKLKAGKVYKAGEPVEYIVDRAVVKALLKPGIFGVEVV 184
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSPKDEE-EYVKPTLVA 226
I+ P +PD V I + K EE E +KP A
Sbjct: 185 IV---------KPGIRMPDHVEIKTLKPEELEALKPAKAA 215
>gi|149064299|gb|EDM14502.1| rCG46746 [Rattus norvegicus]
Length = 77
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 53/64 (82%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
QISK RK VA+G+F AELNE LT+ELAEDG+SGVEV VT RTEI I ATRTQ+VLGEKG
Sbjct: 2 QISKNRKSVAEGIFKAELNEFLTQELAEDGHSGVEVWVTLTRTEINISATRTQDVLGEKG 61
Query: 64 RRIR 67
IR
Sbjct: 62 HGIR 65
>gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 207
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
+R+F+ D + +++ L EL++ G+S VE++ TP+ T I + V+G G+ I
Sbjct: 4 ERRFIDDAIIKLNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAID 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+LT ++ RF N+ + +V N+ + + A+ + +KL G+ R+ L+ IM
Sbjct: 64 DLTETIKSRFNV--NNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIM 121
Query: 128 ESGAKGCEVIVSGKLRAQ--RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIK 185
E+GA G E+I+SGKL A+ RAKS++ GY+ +G +N ++ V + G +G+
Sbjct: 122 ENGALGAEIIISGKLAAKGARAKSIRKSVGYIPKAGDVIN-LVNKGVATAYPKYGAIGVV 180
Query: 186 VKIMLSWDPNGKQGPTTPLPD 206
V+I+ P T PD
Sbjct: 181 VRIV---------PPGTVFPD 192
>gi|374633062|ref|ZP_09705429.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
gi|373524546|gb|EHP69423.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
Length = 231
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 104/203 (51%), Gaps = 7/203 (3%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L ++ Y+G E+ TPM T +II A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSLTRVMVDEYLAKQYYNAEYAGSEIIKTPMGTRVIIYAGRPAMIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
+L ++++ F EN ++ + L A A L L G RRA + +R IM
Sbjct: 65 QLHQILERYFNL-ENP-QITVAQPEKPELNARVMAFRLAVTLERGYHFRRAAFITIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+ G+ G++V
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNSLDVMVDRAIAIATLKMGIYGVEVI 182
Query: 188 IMLSWDPNGKQG-----PTTPLP 205
I K PT+P P
Sbjct: 183 ITKPLKNIDKMSLRELTPTSPQP 205
>gi|350427367|ref|XP_003494734.1| PREDICTED: 40S ribosomal protein S3-like, partial [Bombus
impatiens]
Length = 80
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 57/79 (72%), Gaps = 3/79 (3%)
Query: 161 GQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYV 220
G+P NEY+++A RHVLLRQGVLGIKVKIML +DP+GK GP PLPD V+I PKDE
Sbjct: 1 GEPTNEYVNTATRHVLLRQGVLGIKVKIMLPYDPHGKTGPKKPLPDSVSIVEPKDEVFPS 60
Query: 221 KPTL---VATDIEVPIQVA 236
+PT + D+ PI +A
Sbjct: 61 QPTSEVKASKDLPQPIPLA 79
>gi|170290796|ref|YP_001737612.1| 30S ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 251
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 112/213 (52%), Gaps = 13/213 (6%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV +G+ +L+E + + + G+ GVE+ TP+R I + ++G GR +
Sbjct: 11 KKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSKR 70
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
++ ++++ ++ A+KV+ L A + ++ G ++ Y L +M
Sbjct: 71 ISDILKEELGIQNPYIQ--AKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMA 128
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GAKG E+ +SGK +QRA+ +F++G + GQ E ++ AV+HVL+ QG++G++V+I
Sbjct: 129 EGAKGVEIRLSGKFGSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRVRI 188
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
+ P PD V I +DE E ++
Sbjct: 189 V---------KPGVRGPDAVVIK--EDEIERIR 210
>gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3 [Metallosphaera sedula DSM 5348]
gi|172046893|sp|A4YCX2.1|RS3_METS5 RecName: Full=30S ribosomal protein S3
gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348]
Length = 240
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TPM T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L +++K F EN ++ + L A A L L G RRA + +R IM
Sbjct: 65 RLAQILEKYFNL-ENP-QITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+ G+ G++V
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEVV 182
Query: 188 I 188
I
Sbjct: 183 I 183
>gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon]
Length = 234
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 27/214 (12%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELT 70
FV +G+ ++E +EL GY G++++ TPM T+I + + ++G+ G+RI+++T
Sbjct: 6 FVEEGIKKVRMDEYFQKELERAGYGGMDIKRTPMGTQITVHVEKPGMIIGKNGKRIKKVT 65
Query: 71 SVVQKRFKF--------PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
+ K+ + P + EL A+ ++NR I + G RRA
Sbjct: 66 DEITKKQELDNPQIDVQPIAAPELSAQLMSNRLAKLIER----------GWHFRRAGRST 115
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
L+ IM +GA GCE+ +SGKLR R + K +GY+ G E +D + GV+
Sbjct: 116 LQRIMGAGALGCEITMSGKLRGPRGRVEKMVEGYIKHCGSVAEEIVDKGYSIAQKKTGVI 175
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
G+ V I+ P +PD ++ K++
Sbjct: 176 GVMVWIV---------APDANIPDSFRMNVVKED 200
>gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
Length = 239
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 2/181 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TPM T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L ++++ F S ++ + L A A L L G RRA + +R IM
Sbjct: 65 RLAQILERYFNL--ESPQITVAQPEKPELNARVMAFRLAVTLEKGYHFRRAAFITIRKIM 122
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G EVIVSGK+ ++RAK K K+G + +G ++ +D A+ L+ G+ G++V
Sbjct: 123 NAGALGAEVIVSGKITSERAKFEKLKEGIVYKTGNGLDVMVDRAIAIATLKMGIYGVQVV 182
Query: 188 I 188
I
Sbjct: 183 I 183
>gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 269
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 2/187 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+Q S RKF+ V + E L + + G+ G++ + TP T++ + A R V+G K
Sbjct: 2 SQNSTIRKFIDRNVERLLVREFLLSKTEKAGFGGLDFQRTPEGTKVTLSAERVGMVIGRK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G+ I EL +Q F +E+ +++N L A A L L G RRA +
Sbjct: 62 GKIINELQRRLQNDFNLENPRLEVA--EIDNPALNAQVMASKLASALERGWYFRRAGHSS 119
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
L IM++GAKGC V++SGKL R ++ KF+ G++ G +++D + + G +
Sbjct: 120 LLNIMDAGAKGCLVVLSGKLTGSRNRTQKFQAGHIKYCGDTAIQFMDVGKAVCVKKLGTI 179
Query: 183 GIKVKIM 189
G V IM
Sbjct: 180 GCTVAIM 186
>gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3 [Thermoproteus uzoniensis 768-20]
gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 92/169 (54%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +LA GY E+ TP+ T I+I A R ++G+KG ++EL+ ++ +
Sbjct: 2 IKEFLEYKLARLGYVDSEILKTPLGTRIVIYAERPSRIIGKKGAVVKELSQILGSKLGVE 61
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ KV+ + A + + G+ RR + +R + E+GA+G E+++S
Sbjct: 62 NPQIDVIDISKVDVPEMFPKVVAYRIANAMAKGIRFRRVAFIAIRQVTEAGARGFELVIS 121
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RAK K+K G + +G + + SAV HVLL+ G+ GIK I
Sbjct: 122 GKLSTERAKFEKYKIGKVYKTGADSTKTMRSAVVHVLLKPGIYGIKATI 170
>gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 231
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 14/215 (6%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +E G+ G+ TP T++ + A + V+G +G+ I EL +Q+ FK
Sbjct: 19 VREYLLKETERAGFGGLHFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQRRLQEDFKLT 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+E+ E++ + + A A L L G RRA + ++ IM++GA+GC VI+SG
Sbjct: 79 NPQLEV--EEIEDSRINAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIVILSG 136
Query: 141 KLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGP 200
K+ R + KF+ G++ G+ +++D + + G +G V+IM P
Sbjct: 137 KITGARHRVEKFQKGHIKYCGETALQFMDVGFSTAVKKLGTVGCTVRIMR---------P 187
Query: 201 TTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQV 235
T LP + I ++ E P LV VP+++
Sbjct: 188 GTKLPHEIAI---QERHESGLPQLVEASGFVPLEL 219
>gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
Length = 228
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 2/180 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D + + E L LA+ GY +V TP+ T II+ A R ++G KG ++E
Sbjct: 12 KKILQDKIKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIVYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT ++ K+ + EN + + + N L A + + + G+ RRA +R IM+
Sbjct: 72 LTELLSKKLEV-ENPI-IDVTPIQNPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMD 129
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GAKG EV +SGKL ++R++ K+ G + +G + V VLL+ G+ GI+V+I
Sbjct: 130 GGAKGAEVTISGKLTSERSRFEKYIYGTIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189
>gi|152060898|sp|A3MTL3.2|RS3_PYRCJ RecName: Full=30S ribosomal protein S3
Length = 216
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 24 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ L A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RAK K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3 [Pyrobaculum calidifontis JCM 11548]
gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
Length = 220
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 28 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 87
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ L A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 88 NPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQLMEAGAKGFEIVVS 147
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RAK K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 148 GKLSTERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 196
>gi|193084311|gb|ACF09970.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 367
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 97/202 (48%), Gaps = 11/202 (5%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
R F+ V + E L RE G+ G+ TP T++ ++A + V+G +G+ I E
Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +Q F EN L E+V L A A L L G RRA + + IM+
Sbjct: 68 LQRRLQNDFIL-ENP-HLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMD 125
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+GC VI+SGK+ R + KF+ G++ G+ E++D+ + + G +G V+I
Sbjct: 126 AGARGCLVILSGKITGPRHRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTVRI 185
Query: 189 MLSWDPNGKQGPTTPLPDLVTI 210
M P LP +TI
Sbjct: 186 MR---------PGVKLPHEITI 198
>gi|352682734|ref|YP_004893258.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
gi|350275533|emb|CCC82180.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
Length = 216
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L +LA GY EV TP+ T I+I A R ++G+KG ++E
Sbjct: 12 KKILQDNVKRWMIKEFLEYKLARLGYIYSEVLKTPLGTRIVIYAERPSRIIGKKGAVVKE 71
Query: 69 LTSVVQKRFKFPENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 127
L+ ++ + +++ KV+ + A + + G+ RR + +R +
Sbjct: 72 LSQILSAKMGVDNPQIDVIDISKVDVPEMFPKVIAYRIANAMAKGIRFRRVAFVAVRQVT 131
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
E+GA+G E+++SGKL +RAK K+K G + SG + + A HVLL+ G+ GI++
Sbjct: 132 EAGARGFELVISGKLSTERAKFEKYKVGKVYKSGNDSMKTVRRAAVHVLLKPGIYGIRIA 191
Query: 188 I 188
I
Sbjct: 192 I 192
>gi|48477718|ref|YP_023424.1| 30S ribosomal protein S3 [Picrophilus torridus DSM 9790]
gi|61215562|sp|Q6L1C1.1|RS3_PICTO RecName: Full=30S ribosomal protein S3
gi|48430366|gb|AAT43231.1| small subunit ribosomal protein S3P [Picrophilus torridus DSM 9790]
Length = 217
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 106/212 (50%), Gaps = 11/212 (5%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
K+++FV D + ++E L +E G+ G+E++ TP T I + R V+G G +I
Sbjct: 2 KEKRFVNDNIKRLLVSEYLRKENDNAGFGGMEMKRTPYGTNITLYVNRPGLVIGRHGTKI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+E+T ++KRF +E+ ++VN L ++ + L G R+A LR +
Sbjct: 62 KEMTETLEKRFAIESPQIEV--KEVNTPDLNPQIASKKIALSLEKGWNYRKAGNTSLRKM 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
++ A G + + GK+ +RA++ KF G + SG+P ++ L+ G++G+ V
Sbjct: 120 IDLNAPGVLIRIGGKISGERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLKTGIIGVSV 179
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
+I+ S LPD + I K E+E
Sbjct: 180 RILKS---------NYRLPDDIEIKPVKIEKE 202
>gi|193083750|gb|ACF09437.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 259
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 2/181 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
R F+ V + E L RE G+ G+ TP T++ ++A + V+G +G+ I E
Sbjct: 8 RAFIHRNVERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHE 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
L +Q F EN L E+V L A A L L G RRA + + IM+
Sbjct: 68 LQRRLQNDFIL-ENP-HLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMD 125
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GA+GC VI+SGK+ R + KF+ G++ G+ E++D+ + + G +G VKI
Sbjct: 126 AGARGCLVILSGKITGPRHRVEKFQQGHVKFCGETALEFMDTGFSTAVKKLGTIGCTVKI 185
Query: 189 M 189
M
Sbjct: 186 M 186
>gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
Length = 228
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 2/180 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L LA+ GY +V TP+ T III A R ++G KG ++E
Sbjct: 12 KKILQDKVKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIIYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
LT ++ ++ EN + + + + L A + + + G+ RRA +R IM+
Sbjct: 72 LTDLLSRKLDV-ENPI-IDVTPIQSPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMD 129
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GAKG EV +SGKL ++R++ K+ G + +G + V VLL+ G+ GI+V+I
Sbjct: 130 GGAKGAEVTISGKLTSERSRFEKYVFGVIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189
>gi|340344786|ref|ZP_08667918.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519927|gb|EGP93650.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 251
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TPM T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPMGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRFKF--PENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IRELT + FK P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRELTDKLATDFKLKNPQISVVEIAKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
L+ IM++GA G ++ +SGKLR R+ K G + +G +D + HV G+
Sbjct: 116 TLKQIMDNGAMGVQITISGKLRGDRSAFEKHSAGILPRAGHHAEVIVDEDIAHVKTAMGL 175
Query: 182 LGIKVKIMLS 191
+GI+++I ++
Sbjct: 176 IGIRIRIAIN 185
>gi|68010962|ref|XP_670951.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486681|emb|CAI03517.1| hypothetical protein PB301211.00.0 [Plasmodium berghei]
Length = 82
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 56/77 (72%)
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQG 199
GKLRAQRAKSMKF+DG+++S+G+P ++++A R L QGVLGIKVKIML + K G
Sbjct: 1 GKLRAQRAKSMKFRDGHLISTGEPSKRFVNTATRSAQLNQGVLGIKVKIMLPSAIDTKTG 60
Query: 200 PTTPLPDLVTIHSPKDE 216
+ LPD +++ PK +
Sbjct: 61 LPSILPDNISVLEPKTD 77
>gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3 [Pyrobaculum neutrophilum V24Sta]
gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Pyrobaculum neutrophilum
V24Sta]
Length = 224
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 90/169 (53%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++ +
Sbjct: 31 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGAIVKEISNILMNKLGVE 90
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 91 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAVRQLMEAGAKGFEIVVS 150
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 151 GKLSTERARFEKHTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 199
>gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 307
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 2/189 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
M Q + R F+ V + E L RE G+ G+E TP T++ + A + V+G
Sbjct: 1 MKRQSNTIRTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+G+ I EL ++ FK +E+ ++ L A A L L G RRA +
Sbjct: 61 RRGKVIHELQYRLKSDFKLENPRLEV--NEIEEPRLNAQVMASRLASSLERGWFFRRAGH 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQG 180
+ IM++GA+GC +I+SGK+ R + KF+ G++ G+ +++D + + G
Sbjct: 119 STAQNIMDAGARGCLIILSGKISGPRHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLG 178
Query: 181 VLGIKVKIM 189
+G V+IM
Sbjct: 179 TVGCTVRIM 187
>gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 258
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
Q S R + V + E L RE G+ G+ TP T+I +RA + V+G +G
Sbjct: 3 QQSTIRTLIGRNVERQLVREYLLRETERAGFGGLTFNRTPDGTKISLRAEQVGRVIGRRG 62
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I EL++ ++ F + L E+V L A A + L G RRA +G
Sbjct: 63 KVIHELSARLKNDFFL--DRPHLDVEEVTEPRLNAQIMASRMSSSLERGWFFRRAGHGTA 120
Query: 124 RFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
+ IM++GA+GC V++SGK+ R + KF+ G++ G+ E++D + + G +G
Sbjct: 121 QQIMDAGARGCLVVLSGKITGARHRVEKFQQGHIKFCGETALEFMDIGFSTAVKKLGTIG 180
Query: 184 IKVKIM 189
V+IM
Sbjct: 181 CTVRIM 186
>gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3 [Pyrobaculum islandicum DSM 4184]
gi|152060899|sp|A1RV98.1|RS3_PYRIL RecName: Full=30S ribosomal protein S3
gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
Length = 217
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++ +
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGVIVKEISNILVNKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVIAYRIANAMAKGVRFRRVMFVAVRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKLTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|432096999|gb|ELK27498.1| 40S ribosomal protein S3-B [Myotis davidii]
Length = 106
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%)
Query: 157 MVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 216
M+ SG PVN D+AVRHVL R+GV G+KVKI L WDP+GK+GPT P PD V+I PKDE
Sbjct: 1 MIRSGDPVNYDADTAVRHVLPRRGVRGLKVKITLPWDPSGKRGPTRPPPDHVSIVEPKDE 60
Query: 217 EEYVKPT 223
P+
Sbjct: 61 RPPTAPS 67
>gi|257076565|ref|ZP_05570926.1| 30S ribosomal protein S3P [Ferroplasma acidarmanus fer1]
Length = 228
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 108/210 (51%), Gaps = 11/210 (5%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+ + K++KFV+D + + E L E G+ G++++ TP T I + R V+G
Sbjct: 4 SDMMKEKKFVSDNIKKLLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRH 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G +I+ +TS+++ ++ +E+ ++V N L ++ + L G R+A
Sbjct: 64 GSKIKAMTSILETKYGLESPQIEV--KEVENADLNPQVISKKIALSLEKGWNYRKAGNTT 121
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
LR I++ A+G + + GK+ +RA++ KF G + SG+P + + +L+ G +
Sbjct: 122 LRRIIDQHARGVLIRIGGKISGERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAI 181
Query: 183 GIKVKIMLSWDPNGKQGPTTPLPDLVTIHS 212
GI V+ +L D + LPD ++I++
Sbjct: 182 GIYVR-LLRQDYH--------LPDEISINT 202
>gi|27734520|sp|Q8ZWI0.2|RS3_PYRAE RecName: Full=30S ribosomal protein S3
Length = 218
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 196
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 2 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 61
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 62 NPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 121
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 122 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 170
>gi|379004535|ref|YP_005260207.1| 30S ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
gi|375159988|gb|AFA39600.1| ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
Length = 220
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L +L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|20094278|ref|NP_614125.1| 30S ribosomal protein S3 [Methanopyrus kandleri AV19]
gi|27734506|sp|Q8TX35.1|RS3_METKA RecName: Full=30S ribosomal protein S3
gi|19887318|gb|AAM02055.1| Ribosomal protein S3 [Methanopyrus kandleri AV19]
Length = 227
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 110/213 (51%), Gaps = 10/213 (4%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV G+ EL+E L EL GY G+ ++ P T+II R +G +GR IR
Sbjct: 12 KKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRR 71
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ VQ+RF V + +++ + L A L L G+ RRA YG LR IM
Sbjct: 72 VEEEVQERFPL-LGRVSIEVKELPSPELNPRVVARRLASALERGIHFRRAAYGALRRIMN 130
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+GAKG +I+SGKL RA++ KF +G + G+P +EY+ + + G +G+ V+I
Sbjct: 131 AGAKGAMIILSGKLIGARARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRI 190
Query: 189 MLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVK 221
M P LPD + I P++ E+ +K
Sbjct: 191 MP---------PDVELPDELEIRPPEEVEDELK 214
>gi|193084211|gb|ACF09875.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 400
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 17/231 (7%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVR----VTPMRTEIIIRATRTQNVL 59
++++ R FV V + E L +E G+ G+ T + T++ ++A R V+
Sbjct: 3 KVNQIRHFVDRNVERQLVREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVI 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
G +G+ I EL ++ F EN +L E++ N L A A L L G RRA
Sbjct: 63 GRRGKVINELQRRIRTDFNL-ENP-KLQVEEIENPALNAQVMASKLASALERGWYFRRAG 120
Query: 120 YGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
+ + ++E+GAKGC +I++GKL R ++ KF G++ G+ ++D +++
Sbjct: 121 HSSVLNVIEAGAKGCLIIIAGKLTGSRHRTEKFLKGHIKFCGETALTHMDVGQATAVVKL 180
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE--EEYVKPTLVATD 228
G +G V IM P T LP V I S D Y+ P + T+
Sbjct: 181 GTIGCTVAIM---------KPGTKLPHEVDIISRIDAGLGPYIAPAMAGTE 222
>gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|393796604|ref|ZP_10379968.1| 30S ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 251
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IRELT + F K P+ SV E+ +++ +C A R G A RRA
Sbjct: 61 GIRELTDKLATDFGLKNPQISVVEIDKPELSPSVMCNRMAAHLER-----GTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME+GA G ++ +SGKLR R+ K G + +G +D + HV G+
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHVETAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|374325617|ref|YP_005083814.1| 30S ribosomal protein S3 [Pyrobaculum sp. 1860]
gi|356640883|gb|AET31562.1| 30S ribosomal protein S3P [Pyrobaculum sp. 1860]
Length = 218
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L+ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSRYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R +ME+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV H+LL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDARNRVRRAVIHILLKPGIYGIEVRI 192
>gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 218
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF--P 80
E L +E G+ G+ TP T++ +RA + V+G +G+ I +L +Q+ F P
Sbjct: 21 EFLLKETERAGFGGLNFNRTPEGTKVTLRAEQVGRVIGRRGKVIHDLQRRLQEDFDLDNP 80
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+ VE E N + A A SL G RRA + ++ IM++GA+GC V +SG
Sbjct: 81 QLEVEEIEESRTNAQVMASRLASSLER----GWFFRRAGHSTVQNIMDAGARGCIVTLSG 136
Query: 141 KLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGP 200
K+ R + KF+ G++ G+ + +D + + G +G V+IM P
Sbjct: 137 KITGARHRVEKFQKGHIKYCGETALQLMDVGFSTAVKKLGTIGCTVRIMR---------P 187
Query: 201 TTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 232
LP +TI ++ E P LV VP
Sbjct: 188 GAKLPHEITI---QERSESGLPDLVEASGFVP 216
>gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3 [Pyrobaculum arsenaticum DSM 13514]
gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
Length = 222
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 26 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 85
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 86 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 145
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 146 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 194
>gi|16082264|ref|NP_394722.1| 30S ribosomal protein S3P [Thermoplasma acidophilum DSM 1728]
gi|27734534|sp|Q9HIR5.1|RS3_THEAC RecName: Full=30S ribosomal protein S3
gi|10640611|emb|CAC12389.1| probable 30S ribosomal protein S3 [Thermoplasma acidophilum]
Length = 225
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 11/212 (5%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
K+RKF+ + V + E + +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+++T ++K++ +E+ + V + L A+ + L G + R+A L
Sbjct: 62 QQMTDTLEKKYGIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRT 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+++GAKG + +SGK+ +RA+ KF G + SG+P ++ + + L+ G+LG+ V
Sbjct: 120 IQAGAKGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTV 179
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEE 218
KI+ P LPD+ +I + EE
Sbjct: 180 KIL---------NPEYKLPDVFSIENITGGEE 202
>gi|13541161|ref|NP_110849.1| 30S ribosomal protein S3P [Thermoplasma volcanium GSS1]
gi|27734525|sp|Q97BX1.1|RS3_THEVO RecName: Full=30S ribosomal protein S3
gi|14324549|dbj|BAB59476.1| ribosomal protein small subunit S3 [Thermoplasma volcanium GSS1]
Length = 225
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
K+RKFV + V + E L +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFVNEAVKRLLVYEYLVKETENAGFGKMSMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+++T ++K++ +E+ + V + L A+ + L G + R+A L+
Sbjct: 62 QQMTETLEKKYAIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLKRT 119
Query: 127 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+++GA+G + +SGK+ +RA+ KF G + SG+P ++ + L+ G+LG+ V
Sbjct: 120 IDAGARGVLIKISGKISGERARYQKFIYGNVKYSGEPGSKGMLVGFSTAKLKVGILGVTV 179
Query: 187 KIMLSWDPNGKQGPTTPLPDLVTIHS 212
KI+ P LPD+ +I +
Sbjct: 180 KIL---------NPEYKLPDVFSISN 196
>gi|172046048|sp|A4WIY8.2|RS3_PYRAR RecName: Full=30S ribosomal protein S3
Length = 220
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNILATKLGVE 83
Query: 81 ENSVELY-AEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+++ K+ + A + + G+ RR + +R + E+GAKG E++VS
Sbjct: 84 NPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQLTEAGAKGFEIVVS 143
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I
Sbjct: 144 GKLSTERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>gi|407462398|ref|YP_006773715.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
gi|407046020|gb|AFS80773.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
Length = 251
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLREAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR+LT + F K P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME+GA G ++ +SGKLR R+ K G + +G + + HV G+
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHVNTAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|159041478|ref|YP_001540730.1| 30S ribosomal protein S3 [Caldivirga maquilingensis IC-167]
gi|157920313|gb|ABW01740.1| ribosomal protein S3- domain protein [Caldivirga maquilingensis
IC-167]
Length = 236
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 17/198 (8%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L L + Y ++ T + T I+I A + ++G KG++++ L +++ +F
Sbjct: 25 IKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKALADILKSKFNLD 84
Query: 81 ENSVELYAE---KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVI 137
+++ E + N R L A+ A+++ G+ RRA LR + E+ +G EVI
Sbjct: 85 NVVIDVIQEPHPEYNAR-LVALRIADAM----AKGIRFRRAAIIALRQLQEANVQGAEVI 139
Query: 138 VSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGK 197
+SGKL +R++ K+ G ++ +GQ E + AV VLL+ G+ ++V+++
Sbjct: 140 ISGKLTTERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLKPGIFSVRVRVL-------- 191
Query: 198 QGPTTPLPDLVTIHSPKD 215
P L D + SP++
Sbjct: 192 -PPDAKLSDRFEVKSPEE 208
>gi|386876664|ref|ZP_10118757.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
gi|386805532|gb|EIJ65058.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
Length = 251
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 6/186 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP+ T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLRDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
IR LT + F K P+ SV +++ L + L G A RRA
Sbjct: 61 GIRSLTEKLATDFGLKNPQISVV----EIDKPELAPSVMCNRMASHLERGTAFRRATMWT 116
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
L+ IME GA G ++ +SGKLR R+ K G + +G +D + HV G++
Sbjct: 117 LKQIMEGGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVDEDIAHVKTAMGLI 176
Query: 183 GIKVKI 188
GI+++I
Sbjct: 177 GIRIRI 182
>gi|407464758|ref|YP_006775640.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
gi|407047946|gb|AFS82698.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
Length = 262
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP+ T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR LT + F K P+ SV E+ ++ +C + L G A RRA
Sbjct: 61 GIRALTDKLASDFGLKNPQISVVEIEKPELAPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME GA G ++ +SGKLR R+ K G + +G +D + HV G+
Sbjct: 116 TLKQIMEGGAMGVQITISGKLRGDRSAFEKHTQGILPRAGHHAEIVVDEDIAHVQTAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 8/187 (4%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLRDAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV-ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
IR+LT + F K P+ SV E+ +++ +C + L G A RRA
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 122 VLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
L+ IME+GA G ++ +SGKLR R+ K G + +G + + HV G+
Sbjct: 116 TLKQIMENGAMGVQITISGKLRGDRSAFEKHTAGILPRAGHHAEVIVAEDIAHVGTAMGL 175
Query: 182 LGIKVKI 188
+GI+++I
Sbjct: 176 IGIRIRI 182
>gi|296083024|emb|CBI22428.3| unnamed protein product [Vitis vinifera]
Length = 116
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Query: 16 VFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
+ FA LNE+L R LA+DG SGVEVRV PM TEIII AT+TQNVL ++GR REL + VQK
Sbjct: 11 IIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAARVQK 68
>gi|147827332|emb|CAN62175.1| hypothetical protein VITISV_001516 [Vitis vinifera]
Length = 1989
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 13 ADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSV 72
+D FA LNE+L R LA+DG SGVEVRV PM TEIII AT+TQNVL ++GR REL +
Sbjct: 547 SDVSIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAAR 604
Query: 73 VQK 75
VQK
Sbjct: 605 VQK 607
>gi|374724270|gb|EHR76350.1| 30S ribosomal protein S3 / S3P [uncultured marine group II
euryarchaeote]
Length = 232
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
MA + S R V V + E L + G+ +++R TP TE+ + A R V+G
Sbjct: 1 MAGKKSTLRTIVNRNVERHLVKEFLMQNTKRSGFGALDIRRTPQGTEVTVHAERPGMVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
KG+ I EL + + F EN +L E++ L A AE + L G RRA
Sbjct: 61 RKGKIINELQKRLNEEFDL-ENP-KLKVEEIEKATLNAQVMAEKIASALERGWYHRRAGN 118
Query: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHV----- 175
+ IM+SGA+G V ++GKL R ++ K+ G+ V ++A++H+
Sbjct: 119 SAAQNIMDSGARGVIVTLAGKLTGSRNRTEKYIRGHXXXXXXHVKYCGETALQHMDRGYS 178
Query: 176 --LLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEE 217
+ + G +G+ V IM + T LP ++I S DEE
Sbjct: 179 VAVKKLGTIGVTVAIMRAG---------TKLPHEISIFS--DEE 211
>gi|147838004|emb|CAN69383.1| hypothetical protein VITISV_017964 [Vitis vinifera]
Length = 286
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 39/46 (84%)
Query: 28 ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
++ EDGYS V+VRVTPM EII+RATRTQN L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>gi|118576057|ref|YP_875800.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
gi|152060854|sp|A0RVX9.1|RS3_CENSY RecName: Full=30S ribosomal protein S3
gi|118194578|gb|ABK77496.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
Length = 261
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 80/171 (46%), Gaps = 19/171 (11%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF-- 77
+L E L + + G+SGVEV P T+I + TR V+G KG IRELT ++K F
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 78 KFPENSV------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME-SG 130
K P+ V ELY + NR I + G A RRA ++ IME
Sbjct: 76 KSPQVDVKEIETPELYPGVMCNRMASHIER----------GTAFRRATMWTIQQIMEKKD 125
Query: 131 AKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
A G ++ +SGKLR R+ K G + +G + + V HV G+
Sbjct: 126 AMGVQITISGKLRGDRSAFEKHTSGILPRAGHYADVIVLDDVVHVKTPMGL 176
>gi|41615265|ref|NP_963763.1| hypothetical protein NEQ481 [Nanoarchaeum equitans Kin4-M]
gi|40068989|gb|AAR39324.1| NEQ481 [Nanoarchaeum equitans Kin4-M]
Length = 236
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 17/215 (7%)
Query: 2 ATQISKK--RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
A Q++ K RKF+ + E + L S V +R TP+ +II + R + +
Sbjct: 4 ALQMASKVIRKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMIS 63
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL-AVRRA 118
E R L +++ +F + +E+ + N L A AE L + + A RR
Sbjct: 64 EE---RKAHLAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRL 118
Query: 119 CYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLR 178
L IM +GA G E++++G+L QR K+ +FK G + +G +D A L+
Sbjct: 119 AQRYLETIMNAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLK 178
Query: 179 QGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSP 213
GV GI V I+ P +PD++ SP
Sbjct: 179 PGVAGIHVTIL---------KPDAEIPDIIEFKSP 204
>gi|152060885|sp|Q74MZ4.2|RS3_NANEQ RecName: Full=30S ribosomal protein S3
Length = 230
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 15/206 (7%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
RKF+ + E + L S V +R TP+ +II + R + + E R
Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEE---RKAH 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL-AVRRACYGVLRFIM 127
L +++ +F + +E+ + N L A AE L + + A RR L IM
Sbjct: 64 LAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIM 121
Query: 128 ESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVK 187
+GA G E++++G+L QR K+ +FK G + +G +D A L+ GV GI V
Sbjct: 122 NAGAIGAEIVIAGRLSGQRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVT 181
Query: 188 IMLSWDPNGKQGPTTPLPDLVTIHSP 213
I+ P +PD++ SP
Sbjct: 182 IL---------KPDAEIPDIIEFKSP 198
>gi|154281921|ref|XP_001541773.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411952|gb|EDN07340.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 151
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 36/46 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEII 49
ISK+RKFV GVF+A LN RELAE+GYSGVEVRVTP T+II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>gi|170061554|ref|XP_001866283.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167879747|gb|EDS43130.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 271
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 34/41 (82%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRT 55
G+F AELNE LTR+L +GYSGVEVRVTP RTEIII AT T
Sbjct: 228 GMFLAELNEFLTRQLVANGYSGVEVRVTPTRTEIIIMATCT 268
>gi|332105493|gb|AEE01378.1| ribosomal protein S3 [Bubalus bubalis]
Length = 34
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 31/34 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGY 34
MA QISKKRKFVADG+F AELNE LTRELAEDGY
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGY 34
>gi|161899235|ref|XP_001712844.1| ribosomal protein S3 [Bigelowiella natans]
gi|75756337|gb|ABA27232.1| ribosomal protein S3 [Bigelowiella natans]
Length = 262
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 47/76 (61%)
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVR 173
+ R + LRF++ SG +GC + + G R++R K+ KF+ G + SG N++IDS
Sbjct: 156 SFRSIIFNTLRFLINSGVRGCMIKLKGVYRSKRTKTFKFRRGLISHSGIQNNDWIDSDSF 215
Query: 174 HVLLRQGVLGIKVKIM 189
++ ++G LGI +KIM
Sbjct: 216 YLNKKRGTLGINIKIM 231
>gi|170036208|ref|XP_001845957.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167878755|gb|EDS42138.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 281
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 35/46 (76%)
Query: 30 AEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT+VVQK
Sbjct: 16 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAVVQK 61
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 178 RQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
R LG KIML WDPNGK P PLP+ V + PKDE + P
Sbjct: 79 RWSCLG---KIMLPWDPNGKIDPKEPLPENVLVVEPKDEIMHNTP 120
>gi|328951230|ref|YP_004368565.1| 30S ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
gi|328451554|gb|AEB12455.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
Length = 247
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E++TRE+ G + +++ + + A + ++G G I+ + + +QKRF P
Sbjct: 39 IRELITREVYHGGIARIDIERAADNVSVTVHAAKPGVIIGRGGETIKRMRAELQKRF--P 96
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
++ L ++V N L A A+ + ++ AVRRA ++ +ME+GA+G +V+VSG
Sbjct: 97 NRTISLNVQEVPNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMEAGAQGAKVVVSG 156
Query: 141 KL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
++ A++A++ G + N ID GVLG+K I L
Sbjct: 157 RIGGAEQARTEWAALGRVPLHTLRAN--IDYGFALAWTTYGVLGVKAYIFL 205
>gi|408843732|ref|YP_169380.2| 30S ribosomal protein S3, partial [Francisella tularensis subsp.
tularensis SCHU S4]
gi|408843735|ref|YP_666512.2| 30S ribosomal protein S3, partial [Francisella tularensis subsp.
tularensis FSC198]
Length = 220
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|379716674|ref|YP_005305010.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379716752|ref|YP_005305088.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TIGB03]
gi|379725356|ref|YP_005317542.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
TI0902]
gi|385794093|ref|YP_005830499.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
NE061598]
gi|421754959|ref|ZP_16191917.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700075]
gi|61215376|sp|Q5NHW2.1|RS3_FRATT RecName: Full=30S ribosomal protein S3
gi|123063579|sp|Q14JB4.1|RS3_FRAT1 RecName: Full=30S ribosomal protein S3
gi|56603976|emb|CAG44964.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320288|emb|CAL08347.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
FSC198]
gi|282158628|gb|ADA78019.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
NE061598]
gi|377826805|gb|AFB80053.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828351|gb|AFB78430.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|377828429|gb|AFB78508.1| SSU ribosomal protein S3p (S3e) [Francisella tularensis subsp.
tularensis TIGB03]
gi|409089503|gb|EKM89543.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700075]
Length = 222
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|118496858|ref|YP_897908.1| 30S ribosomal protein S3 [Francisella novicida U112]
gi|385792181|ref|YP_005825157.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|387823814|ref|YP_005823285.1| 30S ribosomal protein S3 [Francisella cf. novicida 3523]
gi|152060861|sp|A0Q4I9.1|RS3_FRATN RecName: Full=30S ribosomal protein S3
gi|118422764|gb|ABK89154.1| 30S ribosomal protein S3 [Francisella novicida U112]
gi|328675413|gb|AEB28088.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida 3523]
gi|328676327|gb|AEB27197.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida Fx1]
Length = 223
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|89255676|ref|YP_513037.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115314177|ref|YP_762900.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134302579|ref|YP_001122550.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501626|ref|YP_001427691.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|254368628|ref|ZP_04984643.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
gi|290953206|ref|ZP_06557827.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
URFT1]
gi|421752464|ref|ZP_16189489.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
AS_713]
gi|421754330|ref|ZP_16191305.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
831]
gi|421758061|ref|ZP_16194921.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700103]
gi|421759892|ref|ZP_16196716.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70102010]
gi|422938172|ref|YP_007011319.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FSC200]
gi|423049986|ref|YP_007008420.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
F92]
gi|424675214|ref|ZP_18112123.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70001275]
gi|122325782|sp|Q0BNS1.1|RS3_FRATO RecName: Full=30S ribosomal protein S3
gi|123094541|sp|Q2A5G4.1|RS3_FRATH RecName: Full=30S ribosomal protein S3
gi|152060862|sp|A4IZS8.1|RS3_FRATW RecName: Full=30S ribosomal protein S3
gi|189045009|sp|A7N9T2.1|RS3_FRATF RecName: Full=30S ribosomal protein S3
gi|89143507|emb|CAJ78683.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115129076|gb|ABI82263.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134050356|gb|ABO47427.1| ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156252229|gb|ABU60735.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121536|gb|EDO65721.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
gi|407293323|gb|AFT92229.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FSC200]
gi|409084854|gb|EKM85015.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
831]
gi|409085048|gb|EKM85201.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
AS_713]
gi|409089809|gb|EKM89841.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70102010]
gi|409090631|gb|EKM90644.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
80700103]
gi|417434163|gb|EKT89131.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
70001275]
gi|421950708|gb|AFX69957.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
F92]
Length = 223
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|187932137|ref|YP_001892122.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226697715|sp|B2SDX9.1|RS3_FRATM RecName: Full=30S ribosomal protein S3
gi|187713046|gb|ACD31343.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 223
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGDDVEKLRAEVHKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L GV+G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATAEALTTYGVIGVKVWI 202
>gi|384210006|ref|YP_005595726.1| 30S ribosomal protein S3 [Brachyspira intermedia PWS/A]
gi|343387656|gb|AEM23146.1| ribosomal protein S3 [Brachyspira intermedia PWS/A]
Length = 245
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|445062113|ref|ZP_21374548.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30599]
gi|444506508|gb|ELV06835.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30599]
Length = 245
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+++ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDATLAAQNVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|225621034|ref|YP_002722292.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
gi|225215854|gb|ACN84588.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
Length = 202
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 19 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKP---VHF 75
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 76 SITEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 135
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 136 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 176
>gi|429123826|ref|ZP_19184358.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30446]
gi|426280395|gb|EKV57410.1| 30S ribosomal protein S3 [Brachyspira hampsonii 30446]
Length = 245
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+++ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDATLAAQNVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|337754255|ref|YP_004646766.1| 30S ribosomal protein S3 [Francisella sp. TX077308]
gi|336445860|gb|AEI35166.1| SSU ribosomal protein S3p (S3e) [Francisella sp. TX077308]
Length = 222
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L S V K
Sbjct: 38 KVREFLHKKLASAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRSDVNKLMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A A+S+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D + L G++G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYSTAQALTTYGIIGVKVWI 202
>gi|167626800|ref|YP_001677300.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254875930|ref|ZP_05248640.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596801|gb|ABZ86799.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841951|gb|EET20365.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 222
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLASAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRADVNKLMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A A+S+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L G++G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATSKALTTYGIIGVKVWI 202
>gi|147795005|emb|CAN71930.1| hypothetical protein VITISV_040426 [Vitis vinifera]
Length = 414
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 37/47 (78%)
Query: 28 ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
++ EDGYS ++V+VT M EIIIRAT+TQN L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>gi|387885959|ref|YP_006316258.1| 30S ribosomal protein S3 [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386870775|gb|AFJ42782.1| 30S ribosomal protein S3 [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 222
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R V+G+KG + +L + V K
Sbjct: 38 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARPGIVIGKKGEDVEKLRADVNKLMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A A+S+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 98 P---VQINIEEVRKPEIDAKLVADSVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A+S +DG + P+ + +D A L G++G+KV I
Sbjct: 155 GRLGGAEIARSEWARDGRV-----PLQTFRADVDYATSKALTTYGIIGVKVWI 202
>gi|313680509|ref|YP_004058248.1| 30S ribosomal protein S3 [Oceanithermus profundus DSM 14977]
gi|313153224|gb|ADR37075.1| SSU ribosomal protein S3P [Oceanithermus profundus DSM 14977]
Length = 247
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E++ E+A G + +++ + + A + ++G G I+ + + +QK F
Sbjct: 38 KVRELIENEVAHGGIARIDIERAADNLSVTVHAAKPGVIIGRGGETIKRMRAELQK--MF 95
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P ++ L ++V N L A A+ + ++ AVRRA ++ ++ESGA+G +V+VS
Sbjct: 96 PNRTIALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVVESGAQGAKVVVS 155
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G++ A++A++ DG + N ID GVLG+K I
Sbjct: 156 GRIGGAEQARTEWSSDGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIF 204
>gi|290559289|gb|EFD92626.1| KH type 2 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 223
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V E L ++ G S +++ TP+ +III+ + ++ + +RE
Sbjct: 4 KKIITDKVNEESAREYLFKKFNRFGISDIKIEKTPLGMKIIIKTPKPGAIITRANQILRE 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ + + FK +E+ N IA + + + G + + + + IM
Sbjct: 64 SSKDLGEFFKQESPRIEVENSLDPNLDPAIIADSIAFKIAKFGPMKYKVVIHKAMDSIMA 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFK--DGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+GAKG E+ + G ++ +RA KF+ M +GQ + +A + ++L++G +GIKV
Sbjct: 124 AGAKGVEIEIGGVIK-ERAAHFKFRPIGSVMPKTGQVEFFGVRTAKKQLVLKRGSIGIKV 182
Query: 187 KIMLSWDPNG 196
I++ + G
Sbjct: 183 TIVVPTETVG 192
>gi|303233154|ref|ZP_07319827.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
gi|302480739|gb|EFL43826.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
Length = 236
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 6/194 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + LA+ S VE+ + ++ I +R V+G+KG I +L + VQ+
Sbjct: 38 EIRKYLKKRLAKAALSRVEIERAGDKVKVSILTSRPGIVIGKKGGEIDDLRNDVQRIAGL 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P+ SV + ++ L A A+ + +L G +A RRA ++ ++GAKG + S
Sbjct: 98 PKGSVHVEVVEIKQPDLDAQLTADRIAEQLEGRVAFRRAVRKAVQAATKAGAKGIRIQCS 157
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQG 199
G+L +++ V + ID A G +GIKV I L G++
Sbjct: 158 GRLNGAEMGRVEWSREGRVPL-HTLRAKIDFATATASTTMGAVGIKVWIYL-----GEKL 211
Query: 200 PTTPLPDLVTIHSP 213
P P P+ +P
Sbjct: 212 PGQPAPNPALEGAP 225
>gi|452994637|emb|CCQ93744.1| ribosomal protein S3 (BS3) [Clostridium ultunense Esp]
Length = 221
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
++ A+ F A L+E L +LA+ G S +E+ R + + + V+G+ G
Sbjct: 21 RWYAEKDFAALLHEDLKIRKFLEEKLADAGISHIEIERAANRLNLTLHTAKPGMVIGKGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I L + + K + V + ++ L A AES+ +L ++ RRA +
Sbjct: 81 QEIENLRNAISK---MTDKKVHINVNEIKKPDLDAKLVAESIAKQLENRVSFRRAMKQAM 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ +M +GAKG +V VSG+L A+ A++ + +G + P++ ID A+
Sbjct: 138 QRVMRAGAKGVKVAVSGRLGGAEIARTEGYSEGTV-----PLHTLRADIDFAIEEAHTTY 192
Query: 180 GVLGIKVKI 188
GV+G+KV I
Sbjct: 193 GVIGVKVWI 201
>gi|384438867|ref|YP_005653591.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359290000|gb|AEV15517.1| hypothetical protein TCCBUS3UF1_4690 [Thermus sp. CCB_US3_UF1]
Length = 239
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ EVLT+EL G + +++ + + + V+G G +I+ L + K
Sbjct: 39 IREVLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLAK---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSG 155
Query: 141 KL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
++ A++A++ +G + N ID GVLG+K + L
Sbjct: 156 RIGGAEQARTEWAAEGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYVFLG 205
>gi|269986910|gb|EEZ93186.1| KH type 2 domain protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 223
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRE 68
+K VA+ V E L ++ + G S + + TP+ +I+I+ + ++ + +RE
Sbjct: 4 KKIVANRVNDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILRE 63
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIME 128
+ + + F +E+ + N +A + + + G + + + + IM
Sbjct: 64 SSKELGEYFNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIMS 123
Query: 129 SGAKGCEVIVSGKLRAQRAKSMKFK--DGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKV 186
+GA+G E+ + G ++ +RA KF+ M +GQ + SA + ++L++G +GIKV
Sbjct: 124 AGARGVEIEIGGVIK-ERAAHFKFRPTGSVMPKTGQVEFFGVRSAKKQLVLKRGSIGIKV 182
Query: 187 KIML 190
I++
Sbjct: 183 TIVV 186
>gi|410696291|gb|AFV75359.1| ribosomal protein S3, bacterial type [Thermus oshimai JL-2]
Length = 239
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 13/198 (6%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E LT+EL G + +++ + + + V+G G +I+ L + K
Sbjct: 39 IREFLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDQLSK---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSG 155
Query: 141 KL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQG 199
++ A++A++ +G + N ID GVLG+K + L G++
Sbjct: 156 RIGGAEQARTEWAAEGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYVFLGEVIGGQKS 213
Query: 200 PTTPLPDLVTIHSPKDEE 217
P +PK EE
Sbjct: 214 KARP-------EAPKGEE 224
>gi|406965930|gb|EKD91514.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 213
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 9/185 (4%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
K +F+ + + ++ EVL ++L G S +E+ + +III R ++G G +
Sbjct: 28 KYHQFLGEDI---KIREVLMKKLRPAGISNIEIERAINKLKIIIFVARPGVLIGRGGAGL 84
Query: 67 RELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
EL + K K E S+E+ V N + A A+++ +L L R L
Sbjct: 85 TELKKFIMKTLKIKEEGSLEIVPMDVKNPDMSAYLVAQNIAEQLARRLPAARVMNQSLDR 144
Query: 126 IMESGAKGCEVIVSGKLRAQRA--KSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLG 183
+M +GAKG +V+VSG++ + KF + + + ID AV L + G +G
Sbjct: 145 VMNAGAKGVKVVVSGRIGGAEIARRESKFAGSIPLHT---LRADIDFAVYPALTKSGYVG 201
Query: 184 IKVKI 188
+KV I
Sbjct: 202 VKVWI 206
>gi|327243123|gb|AEA41162.1| ribosomal protein S3 [Metacarcinus magister]
Length = 31
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 33 GYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
GYSGV+VR TP RTEIII ATRTQNVLGEKG
Sbjct: 1 GYSGVQVRHTPARTEIIILATRTQNVLGEKG 31
>gi|296126871|ref|YP_003634123.1| 30S ribosomal protein S3 [Brachyspira murdochii DSM 12563]
gi|296018687|gb|ADG71924.1| ribosomal protein S3 [Brachyspira murdochii DSM 12563]
Length = 245
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R I I R V+G KG+R+ + + VQK K P V
Sbjct: 62 KESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKP---VHF 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ + L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SITEIRDAELDAALAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + N ID L G++GIKV I
Sbjct: 179 IARTEQYKNGSVPLHTLRAN--IDYGTAEALTTFGIIGIKVWI 219
>gi|62263397|gb|AAX78158.1| unknown protein [synthetic construct]
Length = 224
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L ++LA S +++ +I I R+ V+G+KG + +L + V K
Sbjct: 64 KVREFLHKKLAAAAVSKIQIERPAQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGI 123
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V++ E+V + A AES+ +L + RRA ++ M+SGAKG +++VS
Sbjct: 124 P---VQINIEEVRKPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVS 180
Query: 140 GKL-RAQRAKSMKFKDG 155
G+L A+ A+S +DG
Sbjct: 181 GRLGGAEIARSEWARDG 197
>gi|300870641|ref|YP_003785512.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
gi|404475011|ref|YP_006706442.1| 30S ribosomal protein S1 [Brachyspira pilosicoli B2904]
gi|431808531|ref|YP_007235429.1| 30S ribosomal protein S3 [Brachyspira pilosicoli P43/6/78]
gi|434383116|ref|YP_006704899.1| 30S ribosomal protein S3 [Brachyspira pilosicoli WesB]
gi|300688340|gb|ADK31011.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
gi|404431765|emb|CCG57811.1| 30S ribosomal protein S3 [Brachyspira pilosicoli WesB]
gi|404436500|gb|AFR69694.1| 30S ribosomal protein S1 [Brachyspira pilosicoli B2904]
gi|430781890|gb|AGA67174.1| 30S ribosomal protein S3 [Brachyspira pilosicoli P43/6/78]
Length = 245
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 6/163 (3%)
Query: 27 RELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVEL 86
+E + S +++ P R + I R V+G KG+R+ + + VQK K P N +
Sbjct: 62 KESFDPAISDIQIVRFPDRINVFISTARVGVVVGPKGQRVEAVKAAVQKLVKKPIN---V 118
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQ 145
++ L A A+S+ +L +A RRA V+ M+ GAKG +V+ SG+L A
Sbjct: 119 SISEIKEAELDATLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGAD 178
Query: 146 RAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++K+G + + ID G++G+KV I
Sbjct: 179 IARTEQYKNGSV--PLHTIRANIDYGTAEASTTFGIIGVKVWI 219
>gi|406994551|gb|EKE13532.1| hypothetical protein ACD_13C00010G0018 [uncultured bacterium]
Length = 217
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 1 MATQISKKRKFVADGVFFA-------ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRAT 53
+ T + K ++ AD F ++ E LT++L G +GVE+ P +II +
Sbjct: 12 VGTFLPWKSRWFADSASFKNFLIEDIKIREELTKKLKLAGVTGVEIERLPKSMVVIITVS 71
Query: 54 RTQNVLGEKGRRIRELTSVVQK------RFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
R V+G G I ++ + K + + +++ +V N L A A+ +
Sbjct: 72 RPGVVIGHGGTGIEDVKKFILKIMSDVRKKAVKDIKIDIRINEVKNPELSAYLVADRIAG 131
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNE 166
++ + RRA + +M GA G +V+++G++ A+ ++ F +G + Q + E
Sbjct: 132 EMERRIPHRRAVQKAIERVMAGGALGIKVVLAGRINGAEISRVETFHEGSV--PAQTLRE 189
Query: 167 YIDSAVRHVLLRQGVLGIKVKI 188
ID A LL++G +G+KV I
Sbjct: 190 NIDYAQIPALLKRGYVGVKVWI 211
>gi|218294760|ref|ZP_03495614.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
gi|218244668|gb|EED11192.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
Length = 239
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + LT+EL G + V++ + + + V+G G +I+ L + K
Sbjct: 38 QIRDYLTKELYPAGLARVDIERAADNVAVSVHVAKPGVVIGRGGEKIKVLRDALAK---L 94
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V L ++++N L A A+ + ++ AVRRA ++ +MESGAKG +VIVS
Sbjct: 95 TGKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVS 154
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
G++ A++A++ +G + Q + ID GVLG+K + L
Sbjct: 155 GRIGGAEQARTEWAAEGRVPL--QTLRANIDYGFALARTTYGVLGVKAYVFLG 205
>gi|320451294|ref|YP_004203390.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
gi|320151463|gb|ADW22841.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
Length = 239
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 6/172 (3%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ EVLT+EL G + +++ + + + V+G G +I+ L + +
Sbjct: 39 IREVLTKELYPAGLARIDIERAADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLSQ---LT 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++++N L A A+ + ++ AVRRA ++ +ME+GAKG +VIVSG
Sbjct: 96 GKNVALNVQEIHNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMEAGAKGAKVIVSG 155
Query: 141 KL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
++ A++A++ +G + N ID GVLG+K + L
Sbjct: 156 RIGGAEQARTEWAAEGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYVFLG 205
>gi|406881487|gb|EKD29536.1| 30S ribosomal protein S3 [uncultured bacterium (gcode 4)]
Length = 210
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 42 TPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQ 101
T T I+I ++T VLG+ G + +L +QK F + ++V L A
Sbjct: 60 TDSETSIVIYTSKTAFVLGKNGENLTKLEEEIQKNF---PGKYAIEVKEVKKPELSASLV 116
Query: 102 AESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSS 160
A+S+ ++ L RR L ME G G +VI+SG+L A+ A++ +KDG +
Sbjct: 117 ADSIARQIEKKLPYRRVVKNALVKTMEKGGLGIKVILSGRLNGAEIARTETYKDGAIPR- 175
Query: 161 GQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
Q + ID ++ GV+G+KV I
Sbjct: 176 -QTIRSDIDYSIERANTIYGVIGMKVWI 202
>gi|384938265|ref|ZP_10029957.1| 30S ribosomal protein S3 [Mycoplasma canis UF31]
gi|419704931|ref|ZP_14232475.1| 30S ribosomal protein S3 [Mycoplasma canis UF33]
gi|419705576|ref|ZP_14233114.1| 30S ribosomal protein S3 [Mycoplasma canis UFG1]
gi|419706225|ref|ZP_14233756.1| 30S ribosomal protein S3 [Mycoplasma canis UFG4]
gi|384392919|gb|EIE39372.1| 30S ribosomal protein S3 [Mycoplasma canis UF33]
gi|384393226|gb|EIE39677.1| 30S ribosomal protein S3 [Mycoplasma canis UF31]
gi|384394879|gb|EIE41313.1| 30S ribosomal protein S3 [Mycoplasma canis UFG1]
gi|384395030|gb|EIE41463.1| 30S ribosomal protein S3 [Mycoplasma canis UFG4]
Length = 216
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 40 RVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAI 99
R + ++I + VLG++G+ I+ELT+ +QK K +V L ++ L A
Sbjct: 59 RNKDNKVTVLIHTVKPAAVLGQEGKNIQELTTKLQKFVKNRHLNVNLQVLELKKPDLNAK 118
Query: 100 AQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMV 158
AE + KL + R A +R M++GAKG + +VSG+L A+S + +G M
Sbjct: 119 LLAEMIATKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEM- 177
Query: 159 SSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
+ + +D A G +GIKV + L
Sbjct: 178 -KLHTLRQDVDYATATARTTYGAIGIKVWVSL 208
>gi|419704283|ref|ZP_14231833.1| 30S ribosomal protein S3 [Mycoplasma canis PG 14]
gi|384393071|gb|EIE39523.1| 30S ribosomal protein S3 [Mycoplasma canis PG 14]
Length = 216
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 3/152 (1%)
Query: 40 RVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAI 99
R + ++I + VLG++G+ I+ELT+ +QK K +V L ++ L A
Sbjct: 59 RNKDNKVTVLIHTVKPAAVLGQEGKNIQELTTKLQKFVKNRHLNVNLQVLELKKPDLNAK 118
Query: 100 AQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMV 158
AE + KL + R A +R M++GAKG + +VSG+L A+S + +G M
Sbjct: 119 LLAEMIAAKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEM- 177
Query: 159 SSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
+ + +D A G +GIKV + L
Sbjct: 178 -KLHTLRQDVDYATATARTTYGAIGIKVWVSL 208
>gi|406875985|gb|EKD25679.1| ribosomal protein S3 [uncultured bacterium (gcode 4)]
Length = 222
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 94/193 (48%), Gaps = 15/193 (7%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAED-----GYSGVEVRVTPMRTEIIIRATRTQ 56
A +K ++ AD FF E +V R+ +D G S V +R T EIII +++
Sbjct: 20 AEWFAKYKRTGAD--FFVE--DVKMRKFVDDTFGRSGISKVIIRKTAKEWEIIIFSSKVG 75
Query: 57 NVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
++G++ +I+E ++K+F +++ ++V L A AE + +L + R
Sbjct: 76 VLMGKQWEKIKEFEEALKKKF---NKDMKVVIKEVKIPELSAKIMAEFIASQLEARMPFR 132
Query: 117 RACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHV 175
+ VL+ +ME A G ++ V G+L ++S KF +G + S Q ID
Sbjct: 133 KVAKNVLQKVMEKWAAGIKIQVGGRLGWVDISRSEKFIEGRV--SLQTFRSDIDFYYLQA 190
Query: 176 LLRQGVLGIKVKI 188
+ G+LG+KV I
Sbjct: 191 RTKYGMLGVKVWI 203
>gi|47459076|ref|YP_015938.1| 30S ribosomal protein S3 [Mycoplasma mobile 163K]
gi|61215555|sp|Q6KI49.1|RS3_MYCMO RecName: Full=30S ribosomal protein S3
gi|47458405|gb|AAT27727.1| 30S ribosomal protein s3 [Mycoplasma mobile 163K]
Length = 225
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 5/158 (3%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
+++ + + +LG+ G I +LT +QK + E + + + N L AI AE +
Sbjct: 67 VLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIILAEQIAI 126
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMVSSGQPVNE 166
KL R A +R M+SGAKG + VSG+L A+S + +G M + +
Sbjct: 127 KLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEM--KLHTLRQ 184
Query: 167 YIDSAVRHVLLRQGVLGIKVKIMLS--WDPNGKQGPTT 202
+D A+ G +G+KV + D NG++ TT
Sbjct: 185 DVDFAMATARTTYGAIGVKVWVSKGEFLDGNGEKNVTT 222
>gi|225948|prf||1404256A ribosomal protein HS4
Length = 83
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY +E+ TPM +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGSMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV 82
>gi|297567278|ref|YP_003686250.1| 30S ribosomal protein S3 [Meiothermus silvanus DSM 9946]
gi|296851727|gb|ADH64742.1| ribosomal protein S3 [Meiothermus silvanus DSM 9946]
Length = 250
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ ++ +ELA G + +++ + + A + V+G G I+ L +Q KF
Sbjct: 38 QIRSLIEKELAPAGLARIDIERAADNVAVTVYAAKPGVVIGRGGETIKRLRETLQN--KF 95
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P +V L ++V N L A A+ + ++ AVRRA ++ I ESGA G +++VS
Sbjct: 96 PGKTVALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRIRESGALGAKIVVS 155
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
G++ A++A++ +G + N +D G LG+KV + +
Sbjct: 156 GRIGGAEQARTEWAAEGRVPLHTLRAN--LDYGTARAETTYGSLGVKVYVFMG 206
>gi|406994603|gb|EKE13584.1| hypothetical protein ACD_13C00010G0070 [uncultured bacterium]
Length = 217
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 1 MATQISKKRKFVADGVFFAE-------LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRAT 53
+ T + K ++ AD F + + + LT++L G +GVE+ +P + I +
Sbjct: 12 IGTFLPWKSRWFADNNSFKQFLIEDIRIRKELTKKLKLAGITGVEIERSPKSIVVTITVS 71
Query: 54 RTQNVLGEKGRRIRELTSVVQ------KRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
R V+G G I ++ + ++ + +++ +V + L A AE +
Sbjct: 72 RPGVVIGRGGTGIEDVKKYILGIMNDVRKKTVKDLKIDIRINEVKSPELSAYLVAERIVS 131
Query: 108 KLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNE 166
++ + RRA + +M SGA G +V+++G++ A+ ++ KF G + S Q + E
Sbjct: 132 EMERRIPHRRAVQKAIERVMASGALGIKVVLAGRINGAEISRVEKFHQGSVPS--QTLRE 189
Query: 167 YIDSAVRHVLLRQGVLGIKVKI 188
ID A LL++G +G+KV I
Sbjct: 190 NIDYAQVPALLKRGYVGVKVWI 211
>gi|371776789|ref|ZP_09483111.1| 30S ribosomal protein S3 [Anaerophaga sp. HS1]
Length = 235
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
+++ + L LA+ S + + T I + R ++G+ G+ + +L ++K
Sbjct: 36 SKIRKYLNARLAKASVSRIVIERTLKLVTITVHTARPGIIIGKGGQEVDKLKEELKK--- 92
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ V++ +V L AI A ++ +L G +A RRA + M GA+G ++ V
Sbjct: 93 ITDKEVQINIFEVKRPELDAIIVANNIARQLEGRIAYRRAVKMAIASAMRMGAEGIKIQV 152
Query: 139 SGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIMLSWDP 194
SG+L A+ A+S +K+G P++ + ID A L + G++GIKV I
Sbjct: 153 SGRLNGAEMARSEMYKEGRT-----PLHTFRADIDYAKAEALTKTGLIGIKVWIC----- 202
Query: 195 NGKQGPTTPLPDLVTIHSPKD 215
+G PDL +S KD
Sbjct: 203 ---KGEIYGKPDLSPSYSAKD 220
>gi|227501140|ref|ZP_03931189.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
gi|227216725|gb|EEI82126.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
Length = 239
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
K+ AD F+EL +++ +E+ + G + +E+ +I I A + V+G+
Sbjct: 21 KWFADKKDFSELLVEDYNIRKIVKKEVYDAGIADIEIERAVNNLKITIFAAKPGMVIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL ++K P + + E++ + L A AES+ +L +A RRA
Sbjct: 81 GAGVEELKKKLEK--AAPSKRIIINVEEIKYQDLAAQLVAESIASQLENRVAFRRAMKQS 138
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
++ M +GAKG + +VSG+L A A+S + +G + Q + ID G
Sbjct: 139 IQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPL--QTLRANIDYGFAEADTEYGK 196
Query: 182 LGIKVKI 188
+G KV I
Sbjct: 197 IGCKVWI 203
>gi|254455646|ref|ZP_05069075.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
gi|207082648|gb|EDZ60074.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
Length = 226
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 12/187 (6%)
Query: 6 SKKRKFVADGVFFAE---LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+KK+ F G + E + E + + + G S V + T + + I +R V+G+K
Sbjct: 24 AKKKDF---GNYLIEDFKIREYIKKNVINSGVSKVMIERTSNKCYVTIYTSRPGFVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I ++ + + K F N V L ++V A AE++ +L+ ++ RRA
Sbjct: 81 GSDIDKIKNNLSK---FTTNEVALNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRAQR-AKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
++ + GA+G +V VSG+L A++ +DG + S + ID A L G+
Sbjct: 138 MQSCIRLGARGIKVSVSGRLGGNEIARTEWLRDGSIPS--HTLRADIDYAEAEALTTYGI 195
Query: 182 LGIKVKI 188
+GIKV I
Sbjct: 196 IGIKVWI 202
>gi|46199624|ref|YP_005291.1| 30S ribosomal protein S3 [Thermus thermophilus HB27]
gi|55981655|ref|YP_144952.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
gi|381191145|ref|ZP_09898656.1| 30S ribosomal protein S3 [Thermus sp. RL]
gi|384431866|ref|YP_005641226.1| 30S ribosomal protein S3 [Thermus thermophilus SG0.5JP17-16]
gi|386359809|ref|YP_006058054.1| 30S ribosomal protein S3 [Thermus thermophilus JL-18]
gi|24212666|sp|P80372.3|RS3_THET8 RecName: Full=30S ribosomal protein S3
gi|50401227|sp|P62663.2|RS3_THET2 RecName: Full=30S ribosomal protein S3
gi|10835587|pdb|1FJG|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096396|pdb|1HR0|C Chain C, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399794|pdb|1HNW|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399816|pdb|1HNX|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399838|pdb|1HNZ|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278012|pdb|1GIX|F Chain F, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278058|pdb|1IBK|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278079|pdb|1IBL|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278103|pdb|1IBM|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826122|pdb|1JGO|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826147|pdb|1JGP|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826172|pdb|1JGQ|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|20663888|pdb|1J5E|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065878|pdb|1N32|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065905|pdb|1N33|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065932|pdb|1N34|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065958|pdb|1N36|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-cognate Transfer Rna Anticodon
Stem-loop Mismatched At The Second Codon Position
gi|28373701|pdb|1ML5|F Chain F, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177402|pdb|1XMO|C Chain C, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177425|pdb|1XMQ|C Chain C, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
Decoding Center
gi|58177466|pdb|1XNQ|C Chain C, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177489|pdb|1XNR|C Chain C, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
In The Context Of The Decoding Center
gi|66361056|pdb|1YL4|F Chain F, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192238|pdb|2B64|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Subunit, Trnas, Mrna And
Release Factor Rf1 From A Crystal Structure Of The Whole
Ribosomal Complex". The Entire Crystal Structure
Contains One 70s Ribosome, Trnas, Mrna And Release
Factor Rf1 And Is Described In Remark 400.
gi|88192301|pdb|2B9M|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Ribosomal Subunit, Trnas,
Mrna And Release Factor Rf2 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf2 And Is Described In Remark 400.
gi|88192357|pdb|2B9O|C Chain C, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s Subunit,
Trnas And Mrna From A Crystal Structure Of The Whole
Ribosomal Complex With A Stop Codon In The A-Site And Is
Described In Remark 400.
gi|110591325|pdb|2F4V|C Chain C, 30s Ribosome + Designer Antibiotic
gi|116667656|pdb|2HHH|C Chain C, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|116668199|pdb|2J00|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule I.
gi|116668260|pdb|2J02|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|119389714|pdb|2HGI|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
gi|119389771|pdb|2HGP|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
gi|119389827|pdb|2HGR|F Chain F, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149242710|pdb|2OW8|DD Chain d, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243620|pdb|2UU9|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-codon In The
A-site And Paromomycin.
gi|149243647|pdb|2UUA|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243674|pdb|2UUB|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243701|pdb|2UUC|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-codon In The
A-site And Paromomycin.
gi|149243840|pdb|2UXC|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Ucgu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836410|pdb|2UXB|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Gggu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836487|pdb|2V46|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836543|pdb|2V48|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430902|pdb|2UXD|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Cggg In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|160285941|pdb|2QNH|DD Chain d, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972851|pdb|2VQE|C Chain C, Modified Uridines With C5-methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-g
Wobble Pairing During Decoding
gi|186972874|pdb|2VQF|C Chain C, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156498|pdb|3D5A|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156554|pdb|3D5C|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|218766775|pdb|3F1E|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766831|pdb|3F1G|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|226887376|pdb|2WDG|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887401|pdb|2WDH|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887490|pdb|2WDK|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887547|pdb|2WDM|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823531|pdb|2WH1|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823590|pdb|2WH3|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome). This File Contains The
30s Subunit.
gi|260099988|pdb|3HUW|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule I.
gi|260100044|pdb|3HUY|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule Ii.
gi|261824486|pdb|2WRI|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of 4).
gi|261824548|pdb|2WRK|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of 4).
gi|261824610|pdb|2WRN|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824669|pdb|2WRQ|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307169|pdb|3KIQ|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307227|pdb|3KIS|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307285|pdb|3KIU|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307343|pdb|3KIX|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965606|pdb|3KNH|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule I
gi|289526684|pdb|3KNJ|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule Ii'
gi|289526709|pdb|3KNL|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526734|pdb|3KNN|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979506|pdb|3I8G|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979531|pdb|3I8H|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979590|pdb|3I9B|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979644|pdb|3I9D|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982077|pdb|2X9R|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982136|pdb|2X9T|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567964|pdb|2XFZ|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568022|pdb|2XG1|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|307776614|pdb|3OTO|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
Mutant Of Thermus Thermophilus (Hb8)
gi|309320237|pdb|3OGE|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320258|pdb|3OGY|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320339|pdb|3OHC|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320360|pdb|3OHD|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320441|pdb|3OHY|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320492|pdb|3OI0|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320543|pdb|3OI2|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320594|pdb|3OI4|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207675|pdb|2XQD|C Chain C, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754001|pdb|2XSY|C Chain C, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754116|pdb|2XUY|C Chain C, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533404|pdb|2Y0U|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533463|pdb|2Y0W|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533522|pdb|2Y0Y|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533581|pdb|2Y10|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533640|pdb|2Y12|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533699|pdb|2Y14|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533758|pdb|2Y16|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533817|pdb|2Y18|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|347948797|pdb|3ZVO|C Chain C, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
gi|374074265|pdb|3T1H|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aaa-Codon In The A-Site And Paromomycin
gi|374074290|pdb|3T1Y|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Human Anti-Codon Stem Loop
(Hasl) Of Transfer Rna Lysine 3 (Trnalys3) Bound To An
Mrna With An Aag-Codon In The A-Site And Paromomycin
gi|374074507|pdb|3UXS|C Chain C, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|374074528|pdb|3UXT|C Chain C, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.'
gi|380764244|pdb|3TVF|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764269|pdb|3TVG|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
gi|380764346|pdb|3UYD|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764402|pdb|3UYF|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764522|pdb|3UZ3|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764547|pdb|3UZ4|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764573|pdb|3UZ6|F Chain F, Structure Analysis Of Ribosomal Decoding. This Entry
Contains The 30s Ribosomal Subunit Of The First 70s
Molecule In The Asymmetric Unit For The Cognate Trna-Tyr
Complex
gi|380764599|pdb|3UZ7|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764719|pdb|3UZG|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764775|pdb|3UZI|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764830|pdb|3UZL|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
gi|380764856|pdb|3UZM|F Chain F, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 30s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
gi|381353090|pdb|4ABR|C Chain C, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
gi|381353194|pdb|4DH9|C Chain C, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|381353249|pdb|4DHB|C Chain C, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|388325945|pdb|3V22|C Chain C, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 1st Ribosome In The Asu
gi|388325998|pdb|3V24|C Chain C, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Rmf Of The 2nd Ribosome In The Asu
gi|388326051|pdb|3V26|C Chain C, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 1st Ribosome In The Asu
gi|388326104|pdb|3V28|C Chain C, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Hpf Of The 2nd Ribosome In The Asu
gi|388326227|pdb|3V2C|C Chain C, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 1st Ribosome In The Asu
gi|388326280|pdb|3V2E|C Chain C, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 30s Subunit With
Bound Yfia Of The 2nd Ribosome In The Asu
gi|395759336|pdb|4AQY|C Chain C, Structure Of Ribosome-Apramycin Complexes
gi|414145509|pdb|4DR1|C Chain C, Crystal Structure Of The Apo 30s Ribosomal Subunit From
Thermus Thermophilus (hb8)
gi|414145530|pdb|4DR2|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Multiple Copies Of Paromomycin
Molecules Bound
gi|414145551|pdb|4DR3|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Streptomycin Bound
gi|414145572|pdb|4DR4|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Cognate Transfer Rna
Anticodon Stem-loop And Multiple Copies Of Paromomycin
Molecules Bound
gi|414145595|pdb|4DR5|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Cognate Transfer Rna Anticodon Stem-loop And
Streptomycin Bound
gi|414145618|pdb|4DR6|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Near-cognate Transfer Rna
Anticodon Stem-loop Mismatched At The First Codon
Position And Streptomycin Bound
gi|414145643|pdb|4DR7|C Chain C, Crystal Structure Of The Thermus Thermophilus (hb8) 30s
Ribosomal Subunit With Codon, Crystallographically
Disordered Near-cognate Transfer Rna Anticodon Stem-loop
Mismatched At The Second Codon Position, And
Streptomycin Bound
gi|451928691|pdb|4G5K|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928744|pdb|4G5M|F Chain F, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|451928797|pdb|4G5T|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule A.
gi|451928851|pdb|4G5V|F Chain F, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 30s Subunit Of Molecule B.
gi|453055751|pdb|4DUY|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c
gi|453055772|pdb|4DUZ|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U13c, Bound
With Streptomycin
gi|453055793|pdb|4DV0|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g
gi|453055814|pdb|4DV1|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, U20g, Bound
With Streptomycin
gi|453055835|pdb|4DV2|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a
gi|453055856|pdb|4DV3|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, C912a, Bound
With Streptomycin
gi|453055877|pdb|4DV4|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g
gi|453055898|pdb|4DV5|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A914g, Bound
With Streptomycin
gi|453055919|pdb|4DV6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g
gi|453055940|pdb|4DV7|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit With A 16s Rrna Mutation, A915g, Bound
With Streptomycin
gi|13446666|emb|CAC35062.1| ribosomal protein S3 [Thermus thermophilus HB27]
gi|46197250|gb|AAS81664.1| SSU ribosomal protein S3P [Thermus thermophilus HB27]
gi|55773068|dbj|BAD71509.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
gi|333967334|gb|AEG34099.1| ribosomal protein S3 [Thermus thermophilus SG0.5JP17-16]
gi|380450934|gb|EIA38547.1| 30S ribosomal protein S3 [Thermus sp. RL]
gi|383508836|gb|AFH38268.1| ribosomal protein S3, bacterial type [Thermus thermophilus JL-18]
Length = 239
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 24 VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 42 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 98
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 99 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 158
Query: 143 RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTT 202
A++A++ G + N ID GVLG+K I L G++
Sbjct: 159 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKAR 216
Query: 203 P-LP 205
P LP
Sbjct: 217 PELP 220
>gi|14278532|pdb|1I94|C Chain C, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278553|pdb|1I95|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278574|pdb|1I96|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278596|pdb|1I97|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|149241277|pdb|2E5L|C Chain C, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
The Shine- Dalgarno Interaction
gi|226887631|pdb|2ZM6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
Length = 238
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 24 VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 157
Query: 143 RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTT 202
A++A++ G + N ID GVLG+K I L G++
Sbjct: 158 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKAR 215
Query: 203 P-LP 205
P LP
Sbjct: 216 PELP 219
>gi|429331932|ref|ZP_19212672.1| 30S ribosomal protein S3 [Pseudomonas putida CSV86]
gi|428763443|gb|EKX85618.1| 30S ribosomal protein S3 [Pseudomonas putida CSV86]
Length = 228
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAED-----GYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D S +++ I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L + A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID A
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATYEAHTTY 193
Query: 180 GVLGIKVKIMLSWDPNGKQ---GPTTPLP 205
GV+G+KV I G+Q P P P
Sbjct: 194 GVIGVKVWIFKGEVIGGRQEELKPQAPAP 222
>gi|308233858|ref|ZP_07664595.1| ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|328943566|ref|ZP_08241031.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|327491535|gb|EGF23309.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
Length = 236
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 1/185 (0%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + LA S VE+ + +++I +R V+G+KG I +L VQK K
Sbjct: 38 EIRKYLKKRLASAALSRVEIERAGDKVKVVILTSRPGIVIGKKGTEIDDLRKDVQKIAKV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ V + ++ L A A+ + +L G +A RRA ++ ++GAKG + S
Sbjct: 98 GKGDVNVEVVEIKQPDLDAQLTADRIAEQLEGRVAFRRAVRKAVQGATKAGAKGIRIQCS 157
Query: 140 GKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQG 199
G+L +++ V + ID A G +GIKV I L G+
Sbjct: 158 GRLNGAEMGRVEWSREGRVPL-HTLRAKIDYAQATASTTMGAVGIKVWIYLGEKLPGQSA 216
Query: 200 PTTPL 204
P L
Sbjct: 217 PNPAL 221
>gi|184155985|ref|YP_001844325.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227515493|ref|ZP_03945542.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260662758|ref|ZP_05863652.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
gi|183227329|dbj|BAG27845.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227086106|gb|EEI21418.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260552839|gb|EEX25838.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
Length = 219
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD + A LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKNYAAYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE+ L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNNLTNKRVHI--NVVEIKKPD-----LDAHLVGESVAEQLENRIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG ++ V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRTMRAGAKGIKIQVAGRLNGADMSRIESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKI 188
GVLGIK I
Sbjct: 189 HTTYGVLGIKTWI 201
>gi|291613242|ref|YP_003523399.1| 30S ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
gi|291583354|gb|ADE11012.1| ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
Length = 238
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 18/215 (8%)
Query: 1 MATQISKKRKFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRAT 53
++ Q + K+ ++ F+EL + L ++LA G S + + +I I
Sbjct: 12 LSVQKNWTSKWYSNSKHFSELLLKDIEVRDYLKKKLAGAGVSKIVIERPAKNAKITIYTA 71
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
R V+G+KG I L + ++KR P+ V L E+V + A A+S+ +L +
Sbjct: 72 RPGVVIGKKGEDIESLRNELKKRMGLPD--VGLNIEEVRKPEVDAQLIADSITQQLEKRI 129
Query: 114 AVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMVSSGQPVNEY---ID 169
RRA ++ M GA+G +++ SG+L + A++ +++G + P++ ID
Sbjct: 130 MFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRV-----PLHTLRADID 184
Query: 170 SAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPL 204
L G++G+KV + G+Q P+
Sbjct: 185 YGTSEALTTYGLIGVKVWVYKGDHVAGQQEAAAPV 219
>gi|406910928|gb|EKD50831.1| hypothetical protein ACD_62C00417G0009 [uncultured bacterium]
Length = 209
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+++ + L G S +E+ + +I I +R V+G+KG I +L + +QK
Sbjct: 38 FRKIIKKNLYSMGVSHIEMERAATKLKITIHTSRPGLVIGKKGSGIDQLRNDLQK---LT 94
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+N V L ++V L A AE++ +L +A RRA ++ M+ GA+G +V+ SG
Sbjct: 95 KNQVFLNIQEVRKAELDAQLVAENIALQLERRVAFRRAMKKSVQTTMKFGARGIKVMCSG 154
Query: 141 KLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+L A+ A+ +++G + N ID L G++G++V I
Sbjct: 155 RLAGAEIARREWYREGQVPLHTLRAN--IDYGFAEALTTYGIIGVRVWI 201
>gi|217967375|ref|YP_002352881.1| 30S ribosomal protein S3 [Dictyoglomus turgidum DSM 6724]
gi|226697701|sp|B8E1D9.1|RS3_DICTD RecName: Full=30S ribosomal protein S3
gi|217336474|gb|ACK42267.1| ribosomal protein S3 [Dictyoglomus turgidum DSM 6724]
Length = 245
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 33 GYSGVEV-RVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKV 91
G S +E+ R R +I I R ++G G E+ ++ + K SV + ++V
Sbjct: 51 GISLIEIERKAANRVDITIHTARPGMLIGRGGS---EIENIRKNLVKLTNKSVFVNVQEV 107
Query: 92 NNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSM 150
N L A AE++ ++ + +RA + + +GAKG +V+ SG+L A+ A+S
Sbjct: 108 KNPELDAQLVAENIATQIEKRINYKRAMKQAINRALRAGAKGVKVMCSGRLNGAEIARSE 167
Query: 151 KFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTI 210
F++G + Q + ID GV+G+KV I P + P LP+
Sbjct: 168 WFREGRI--PLQTLTADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEPIQELPEKAVP 225
Query: 211 HSPKDEEEYVK 221
+DE+ Y K
Sbjct: 226 KKIEDEDLYEK 236
>gi|320160420|ref|YP_004173644.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
gi|319994273|dbj|BAJ63044.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
Length = 225
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 12/178 (6%)
Query: 25 LTRELAED-GYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
L RE+AE+ G S VEV P + +I+ + ++G KG +++L ++
Sbjct: 42 LVREIAENAGVSRVEVERFPGKVRVIVFTAKPGILIGRKGESVKKLRQDLEA---LTGKK 98
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
++L +++ N A+ AE+L ++ ++ RRA L+ M GAKG +V V G+L
Sbjct: 99 IDLEIKEIKNPDTDALLVAENLASQIERRVSYRRAMKRALQQAMRQGAKGIKVEVQGRLS 158
Query: 144 -AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGP 200
A+ ++S+ ++G + Q + ID A L G +G+KV W G+ P
Sbjct: 159 GAEMSRSVWLREGRV--PLQTLRADIDFARAEALTTYGRIGVKV-----WVYKGEMAP 209
>gi|104779761|ref|YP_606259.1| 30S ribosomal protein S3 [Pseudomonas entomophila L48]
gi|123381068|sp|Q1IFW0.1|RS3_PSEE4 RecName: Full=30S ribosomal protein S3
gi|95108748|emb|CAK13442.1| 30S ribosomal subunit protein S3 [Pseudomonas entomophila L48]
Length = 228
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAED-----GYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D S +++ I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLQTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTYEAHTTY 193
Query: 180 GVLGIKVKIMLSWDPNGKQ---GPTTPLP 205
GV+G+KV I G+Q P P P
Sbjct: 194 GVIGVKVWIFKGEVIGGRQEELKPQAPAP 222
>gi|24981839|gb|AAN66090.1|AE016238_8 ribosomal protein S3 [Pseudomonas putida KT2440]
Length = 237
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAED-----GYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D S +++ I I R V+G+KG
Sbjct: 31 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 90
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 91 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 147
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID
Sbjct: 148 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTYEAHTTY 202
Query: 180 GVLGIKVKIMLSWDPNGKQ---GPTTPLP 205
GV+G+KV I G+Q P P P
Sbjct: 203 GVIGVKVWIFKGEVIGGRQEELKPQAPAP 231
>gi|148545745|ref|YP_001265847.1| 30S ribosomal protein S3 [Pseudomonas putida F1]
gi|161378146|ref|NP_742626.2| 30S ribosomal protein S3 [Pseudomonas putida KT2440]
gi|167031506|ref|YP_001666737.1| 30S ribosomal protein S3 [Pseudomonas putida GB-1]
gi|170723900|ref|YP_001751588.1| 30S ribosomal protein S3 [Pseudomonas putida W619]
gi|325272013|ref|ZP_08138457.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
gi|339485393|ref|YP_004699921.1| 30S ribosomal protein S3 [Pseudomonas putida S16]
gi|386010119|ref|YP_005928396.1| protein RpsC [Pseudomonas putida BIRD-1]
gi|395446843|ref|YP_006387096.1| ribosomal protein S3 [Pseudomonas putida ND6]
gi|397696205|ref|YP_006534088.1| 30S ribosomal protein S3 [Pseudomonas putida DOT-T1E]
gi|398843898|ref|ZP_10601015.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM84]
gi|421524888|ref|ZP_15971509.1| 30S ribosomal protein S3 [Pseudomonas putida LS46]
gi|421528304|ref|ZP_15974871.1| 30S ribosomal protein S3 [Pseudomonas putida S11]
gi|431800513|ref|YP_007227416.1| 30S ribosomal protein S3 [Pseudomonas putida HB3267]
gi|34098362|sp|Q88QM9.2|RS3_PSEPK RecName: Full=30S ribosomal protein S3
gi|172048429|sp|A5VXQ3.1|RS3_PSEP1 RecName: Full=30S ribosomal protein S3
gi|148509803|gb|ABQ76663.1| SSU ribosomal protein S3P [Pseudomonas putida F1]
gi|166857994|gb|ABY96401.1| ribosomal protein S3 [Pseudomonas putida GB-1]
gi|169761903|gb|ACA75219.1| ribosomal protein S3 [Pseudomonas putida W619]
gi|313496825|gb|ADR58191.1| RpsC [Pseudomonas putida BIRD-1]
gi|324102844|gb|EGC00247.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
gi|338836236|gb|AEJ11041.1| ribosomal protein S3 [Pseudomonas putida S16]
gi|388560840|gb|AFK69981.1| ribosomal protein S3 [Pseudomonas putida ND6]
gi|397332935|gb|AFO49294.1| 30S ribosomal protein S3 [Pseudomonas putida DOT-T1E]
gi|398255130|gb|EJN40170.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM84]
gi|402214261|gb|EJT85591.1| 30S ribosomal protein S3 [Pseudomonas putida S11]
gi|402751351|gb|EJX11864.1| 30S ribosomal protein S3 [Pseudomonas putida LS46]
gi|430791278|gb|AGA71473.1| 30S ribosomal protein S3 [Pseudomonas putida HB3267]
Length = 228
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 11 FVADGVFFAE--LNEVLTRELAED-----GYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG +A+ L ++ TRE +D S +++ I I R V+G+KG
Sbjct: 22 WYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L A+ A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYNTYEAHTTY 193
Query: 180 GVLGIKVKIMLSWDPNGKQ---GPTTPLP 205
GV+G+KV I G+Q P P P
Sbjct: 194 GVIGVKVWIFKGEVIGGRQEELKPQAPAP 222
>gi|224510697|pdb|3FIC|C Chain C, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
Length = 207
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 24 VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 157
Query: 143 RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
A++A++ G + N ID GVLG+K I L
Sbjct: 158 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFLG 204
>gi|406942220|gb|EKD74509.1| hypothetical protein ACD_44C00423G0009 [uncultured bacterium]
Length = 223
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 25 LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
+ +E A G S V ++ +II+ A R ++G+KG + + + V K P V
Sbjct: 42 IQKEWASAGISRVYIKRPAKNAQIIVYAARPGIIIGKKGEEVERVRAHVSKLMGIP---V 98
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL-R 143
L E+V L A AE++ +L + RRA + M SGAKG ++ VSG+L
Sbjct: 99 HLAIEEVRKPELDAKLVAETVAQQLEKRIMFRRAMKRAVTSAMRSGAKGIKINVSGRLGG 158
Query: 144 AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
A+ A++ +++G + + +D + GV+G+KV I
Sbjct: 159 AEIARNEWYREGRV--PLHTLRAEVDYGTAEAMTTYGVIGVKVWIF 202
>gi|34811531|pdb|1PNS|C Chain C, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811587|pdb|1PNX|C Chain C, Crystal Structure Of The Wild Type Ribosome From E. Coli,
30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
Only Molecules Of The 30s Ribosomal Subunit. The 50s
Subunit Is In The Pdb File 1pny.
gi|56966325|pdb|1VOQ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966378|pdb|1VOS|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966431|pdb|1VOV|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966484|pdb|1VOX|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966537|pdb|1VOZ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|300508607|pdb|3MR8|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|300508662|pdb|3MS0|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (30s) And 3ms1 (50s).
gi|322812552|pdb|3PYN|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812605|pdb|3PYQ|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812658|pdb|3PYS|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812711|pdb|3PYU|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 206
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 6/169 (3%)
Query: 24 VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+L +EL G + V++ + + + V+G G RIR L ++ K +
Sbjct: 41 LLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRGGERIRVLR---EELAKLTGKN 97
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL- 142
V L ++V N L A A+ + ++ AVRRA ++ +MESGAKG +VIVSG++
Sbjct: 98 VALNVQEVQNPNLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIG 157
Query: 143 RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLS 191
A++A++ G + N ID GVLG+K I L
Sbjct: 158 GAEQARTEWAAQGRVPLHTLRAN--IDYGFALARTTYGVLGVKAYIFLG 204
>gi|356960596|ref|ZP_09063578.1| SSU ribosomal protein S3P [gamma proteobacterium SCGC AAA001-B15]
Length = 230
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L +EL S + + +III R V+G+KG I L +V +
Sbjct: 38 EVRDYLFKELTSASVSRISIERLSNTAKIIIHTARPGIVIGKKGADIERLKKIVSAKMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E+V L A AE++ +L + RRA VL GA G +++VS
Sbjct: 98 P---VHISIEEVKQPELDARLVAENIAQQLEKRVMYRRAVKRVLGNATRLGALGIKIMVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A+S +++G + P++ + +D + + GV+GIKV I
Sbjct: 155 GRLNGAEIARSEWYREGRV-----PLHTFRADVDYSSFSANTQHGVIGIKVWIF 203
>gi|15599453|ref|NP_252947.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|107103770|ref|ZP_01367688.1| hypothetical protein PaerPA_01004841 [Pseudomonas aeruginosa PACS2]
gi|116052292|ref|YP_788862.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152987607|ref|YP_001346229.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218889415|ref|YP_002438279.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|296387186|ref|ZP_06876685.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAb1]
gi|313111411|ref|ZP_07797216.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
gi|355652608|ref|ZP_09056868.1| 30S ribosomal protein S3 [Pseudomonas sp. 2_1_26]
gi|386056742|ref|YP_005973264.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa M18]
gi|386068404|ref|YP_005983708.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCGM2.S1]
gi|392982085|ref|YP_006480672.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa DK2]
gi|416860418|ref|ZP_11914257.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 138244]
gi|416877964|ref|ZP_11920095.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 152504]
gi|418587988|ref|ZP_13152006.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P1]
gi|418589188|ref|ZP_13153116.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P2]
gi|419756646|ref|ZP_14282991.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PADK2_CF510]
gi|420137284|ref|ZP_14645274.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CIG1]
gi|421151765|ref|ZP_15611367.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 14886]
gi|421157752|ref|ZP_15617097.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 25324]
gi|421165614|ref|ZP_15623936.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 700888]
gi|421172458|ref|ZP_15630228.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CI27]
gi|421178591|ref|ZP_15636201.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa E2]
gi|421518807|ref|ZP_15965481.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO579]
gi|424938879|ref|ZP_18354642.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCMG1179]
gi|451982938|ref|ZP_21931236.1| SSU ribosomal protein S3p (S3e) [Pseudomonas aeruginosa 18A]
gi|452877877|ref|ZP_21955126.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa VRFPA01]
gi|27734535|sp|Q9HWE1.1|RS3_PSEAE RecName: Full=30S ribosomal protein S3
gi|122261441|sp|Q02T74.1|RS3_PSEAB RecName: Full=30S ribosomal protein S3
gi|171460872|sp|A6UZJ4.1|RS3_PSEA7 RecName: Full=30S ribosomal protein S3
gi|9950474|gb|AAG07645.1|AE004841_23 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|115587513|gb|ABJ13528.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|150962765|gb|ABR84790.1| ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218769638|emb|CAW25398.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|310883718|gb|EFQ42312.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
gi|334837550|gb|EGM16307.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 138244]
gi|334838983|gb|EGM17683.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 152504]
gi|346055325|dbj|GAA15208.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCMG1179]
gi|347303048|gb|AEO73162.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa M18]
gi|348036963|dbj|BAK92323.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa NCGM2.S1]
gi|354823946|gb|EHF08209.1| 30S ribosomal protein S3 [Pseudomonas sp. 2_1_26]
gi|375041227|gb|EHS33937.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P1]
gi|375051950|gb|EHS44411.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa MPAO1/P2]
gi|384396401|gb|EIE42819.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PADK2_CF510]
gi|392317590|gb|AFM62970.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa DK2]
gi|403249930|gb|EJY63396.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CIG1]
gi|404348289|gb|EJZ74638.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO579]
gi|404526637|gb|EKA36839.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 14886]
gi|404537724|gb|EKA47307.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa CI27]
gi|404541176|gb|EKA50544.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 700888]
gi|404548195|gb|EKA57159.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa E2]
gi|404550277|gb|EKA59038.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa ATCC 25324]
gi|451759407|emb|CCQ83759.1| SSU ribosomal protein S3p (S3e) [Pseudomonas aeruginosa 18A]
gi|452185433|gb|EME12451.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa VRFPA01]
gi|453042436|gb|EME90180.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA21_ST175]
Length = 228
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 18/206 (8%)
Query: 9 RKFVADGVFFAELN--EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI 66
RK AD FA+L E L +L S +++ I I R V+G+KG +
Sbjct: 26 RKNYAD-YLFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDV 84
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
+L + K+ P V + E++ L A+ A+S+ +L + RRA ++
Sbjct: 85 EKLRQDLTKQMGVP---VHINIEEIRKPELDAMLVAQSVAQQLERRVMFRRAMKRAVQNA 141
Query: 127 MESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVL 182
M GAKG ++ VSG+L A+ A++ +++G + P++ ID A GV+
Sbjct: 142 MRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATYEAHTTYGVI 196
Query: 183 GIKVKIMLSWDPNGKQ---GPTTPLP 205
G+KV I G+Q P P P
Sbjct: 197 GVKVWIFKGEVIGGRQEELKPVAPAP 222
>gi|406706346|ref|YP_006756699.1| 30S ribosomal protein S3 [alpha proteobacterium HIMB5]
gi|406652122|gb|AFS47522.1| SSU ribosomal protein S3P [alpha proteobacterium HIMB5]
Length = 226
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 6 SKKRKFVADGVFFAE---LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
+KK+ F G + E + E + + + G S V + T + + I +R V+G+K
Sbjct: 24 AKKKDF---GNYLIEDFKIREYIKKNVINSGVSKVMIERTSNKCYVTIYTSRPGFVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I ++ + + K N V L ++V A AE++ +L+ ++ RRA
Sbjct: 81 GSDIDKIKNNLAK---ITSNEVALNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRAQR-AKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
++ + GAKG +V +SG+L A++ +DG + S + ID A L G+
Sbjct: 138 MQSCLRLGAKGIKVSISGRLGGNEIARTEWLRDGSIPS--HTLRADIDYAEAEALTTYGI 195
Query: 182 LGIKVKI 188
+GIKV I
Sbjct: 196 IGIKVWI 202
>gi|406983727|gb|EKE04887.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 217
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
Query: 25 LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVV-----QKRFKF 79
L ++L+ G VE+ P II+ +R V+G G I EL V + +
Sbjct: 43 LMKKLSVAGIVSVEIERQPKSIVIIVTVSRPGVVIGRGGSGIEELKKFVVLLLNKGKVTK 102
Query: 80 PEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
EN ++L ++ N L A AE + L + RR+ + +M + A G ++++
Sbjct: 103 TENIKIDLKVNEIKNYDLSAYLVAERIAQDLEKRIPHRRSVTKAMERVMMARAGGIKIVL 162
Query: 139 SGKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+G++ A+ A+ KF G + + Q + E ID A R L ++G +G+KV I
Sbjct: 163 AGRINGAEIARIEKFHQGSVPT--QTLREDIDYAERPALTKRGYVGVKVWI 211
>gi|386817422|ref|ZP_10104640.1| SSU ribosomal protein S3P [Thiothrix nivea DSM 5205]
gi|386421998|gb|EIJ35833.1| SSU ribosomal protein S3P [Thiothrix nivea DSM 5205]
Length = 230
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 10/189 (5%)
Query: 8 KRKFVADGVFFA-------ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
+ K+ A+G +A E+ L ++L E S +++ I I R V+G
Sbjct: 19 RSKWYAEGKDYADFLHKDLEVRSFLKKKLKEASVSRIQIERPAKSAFITIHTARPGVVIG 78
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KG I +L + + N+V+L E++ L A AES+ +L + RRA
Sbjct: 79 KKGEDIEKLRAETASKLGLHVNNVKLNIEEIRKPELDAQLVAESIASQLECRIMFRRAMK 138
Query: 121 GVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
+ M GA G +V V+G+L A+ A++ +++G + + ID A L
Sbjct: 139 RAVSNAMRLGALGVKVSVAGRLNGAEIARTEWYREGRV--PLHTLRADIDYATAEALTTY 196
Query: 180 GVLGIKVKI 188
G++G+KV I
Sbjct: 197 GIIGVKVWI 205
>gi|433624386|ref|YP_007258016.1| 30S ribosomal protein S3 [Mycoplasma cynos C142]
gi|429534412|emb|CCP23914.1| 30S ribosomal protein S3 [Mycoplasma cynos C142]
Length = 216
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 5/148 (3%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
+ ++I R +LG++G+ I+ELT +QK K + ++ L ++ L A AE
Sbjct: 64 KVTVLIHTVRPAAILGQEGKNIQELTVKIQKYVKNRKLNLNLQVLELKKPDLNAKLLAEM 123
Query: 105 LRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYM-VSSGQ 162
+ KL + R A +R M++GAKG + +VSG+L A+S + +G M + + +
Sbjct: 124 IATKLENRESFRSAQKIAIRLAMKAGAKGIKTMVSGRLNGVDMARSEGYSEGEMKLHTLR 183
Query: 163 PVNEYIDSAVRHVLLRQGVLGIKVKIML 190
EY + R G +G+KV I L
Sbjct: 184 QDVEYATATARTTY---GAIGVKVWISL 208
>gi|342210663|ref|ZP_08703419.1| 30S ribosomal protein S3 [Mycoplasma anatis 1340]
gi|341579159|gb|EGS29300.1| 30S ribosomal protein S3 [Mycoplasma anatis 1340]
Length = 217
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 37 VEVRVT-PMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
VEVR T + +I+ + +LG++G+ I ELT + K K +V + ++
Sbjct: 55 VEVRRTQDNKVTVIVHTAKPAAMLGQEGKNIAELTVKLTKSIKNKNLNVNIQVVELKKPD 114
Query: 96 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKD 154
L A AES+ KL + R A +R M SGAKG + VSG+L A++ + +
Sbjct: 115 LNARLLAESIAIKLENRESFRTAQKMAIRNAMRSGAKGIKTAVSGRLNGVDMARTEGYSE 174
Query: 155 GYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIML 190
G M + + +D A G +G+KV + L
Sbjct: 175 GEM--KLHTLRQNVDYATATARTTYGAIGVKVWVSL 208
>gi|377556480|ref|ZP_09786185.1| 30S ribosomal protein S3 [Lactobacillus gastricus PS3]
gi|376168408|gb|EHS87182.1| 30S ribosomal protein S3 [Lactobacillus gastricus PS3]
Length = 214
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD + A LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDYAAYLNEDLRIREYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N VE + L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNALTGKRVHI--NVVE-----IKKPDLEAHLVGESVAQQLENRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG ++ V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRAMRAGAKGIKIQVAGRLNGADMSRVESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKI 188
GVLGIK I
Sbjct: 189 HTTYGVLGIKTWI 201
>gi|359417826|ref|ZP_09209890.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358031816|gb|EHK00656.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 73
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSG-VEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G R
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGNFDLQRTPTSTKIVVEAQRPGLVIGRGGSR 61
Query: 66 IRELTSVVQKR 76
IRELTS +R
Sbjct: 62 IRELTSAPGRR 72
>gi|149192563|ref|ZP_01870730.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
gi|148833604|gb|EDL50674.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
Length = 232
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
AT + ++F DG F ++ + LT+ELA+ S + + + I R V+
Sbjct: 20 ATWFANTKEFADNLDGDF--KVRQFLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
+ GV+GIKV I
Sbjct: 188 SAHTQYGVIGIKVWIF 203
>gi|118602219|ref|YP_903434.1| 30S ribosomal protein S3 [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|152060901|sp|A1AVK6.1|RS3_RUTMC RecName: Full=30S ribosomal protein S3
gi|118567158|gb|ABL01963.1| SSU ribosomal protein S3P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 232
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L +L S +++ +I I R ++G+KG I +L S+V K
Sbjct: 38 KVRDYLFDKLTNASVSRIQIERLANNAKITIHTARPGIIIGKKGADIEQLKSIVSKMMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E++ L A AE++ +L + RRA VL GAKG +V+V+
Sbjct: 98 P---VHINIEEIKKPELDARLVAENIAQQLEKRVMYRRAVKRVLGNTTRLGAKGIKVMVN 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIMLSWDPN 195
G+L A+ A+S +++G + P++ + +D + + GV+GIKV I N
Sbjct: 155 GRLNGAEIARSEWYREGRV-----PLHTFRADVDYSSYGANTQYGVIGIKVWIFKGEILN 209
Query: 196 GKQG 199
K+G
Sbjct: 210 HKKG 213
>gi|344941049|ref|ZP_08780337.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
gi|344262241|gb|EGW22512.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
Length = 223
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 12/171 (7%)
Query: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
+ + ++LA S +++ P I I R V+G+KG I L V K P
Sbjct: 41 DYIKKKLAHASVSRIQINRPPNNAHITIHTARPGIVIGKKGEDIEALRQAVSKIMGIP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V+L E++ L A AE + +L + RRA + M GA+G ++ V G+L
Sbjct: 99 -VQLNVEEIRKPELDAQLVAEGVAQQLEKRIMYRRAMKRAVTNTMRLGAEGIKINVGGRL 157
Query: 143 R-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
A+ A+S +++G + P++ ID A G++GIKV I
Sbjct: 158 NGAEIARSEWYREGRV-----PLHTLRADIDYATAEAHTTYGIIGIKVWIF 203
>gi|224373643|ref|YP_002608015.1| 30S ribosomal protein S3 [Nautilia profundicola AmH]
gi|254764538|sp|B9L6M7.1|RS3_NAUPA RecName: Full=30S ribosomal protein S3
gi|223589411|gb|ACM93147.1| ribosomal protein S3 [Nautilia profundicola AmH]
Length = 240
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
EL + L ++L G S + + T + I I A + ++G+ G I L + +QKR
Sbjct: 38 ELRKFLKKKLYYAGISDIIIERTAKKIRITIFAAKPGIIIGKGGSEIEALKAELQKRIGN 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
E + + E+ L A AE++ ++ +A RRA V++ ++SGAKG +V V+
Sbjct: 98 KELILNIKEERKPQ--LSAQLAAENVATQIERRVAFRRAMKKVIQSALKSGAKGIKVQVA 155
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A++ + +G + + ID L G++G+KV I
Sbjct: 156 GRLNGAEMARTEWYLEGRVPL--HTLRAKIDYGFAEALTTYGIIGVKVWIF 204
>gi|406944039|gb|EKD75900.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 250
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Query: 28 ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN-SVEL 86
+L + G S VE+R + I IR + ++G G + EL +++RF E + L
Sbjct: 46 KLRDGGVSRVEIRRANDQMTIHIRTAKPGVIIGRSGSGVEELKRQIKRRFFGSEKMHIHL 105
Query: 87 YAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
E+V N + A + + ++L + RRA + +M+ GAKG ++IVSG+L
Sbjct: 106 EIEEVRNPDVDAELIMQGIVFQLEKRIPFRRAMKRSIEQVMQGGAKGVKIIVSGRL 161
>gi|238018629|ref|ZP_04599055.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
gi|237865100|gb|EEP66390.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
Length = 221
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + AI AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDAILVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
M GAKG +++VSG+L A+ A+S +++G + + ID G +
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPL--HTLRADIDYGTAEAHTTYGCI 195
Query: 183 GIKVKI 188
GIKV I
Sbjct: 196 GIKVWI 201
>gi|260424860|ref|ZP_05779019.1| ribosomal protein S3 [Dialister invisus DSM 15470]
gi|260403417|gb|EEW96964.1| ribosomal protein S3 [Dialister invisus DSM 15470]
Length = 248
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
A++ + L + L G S + ++ R +I I + V+G G I ++ +
Sbjct: 27 AKIRQFLKKHLFVAGISKIGIKRVGTRIKIAIYTAKPGMVIGRGGTGIEDIKKALAA--- 83
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIV 138
+ V++ ++ ++ + AI E + +L + RRA + M GAKG +V V
Sbjct: 84 VTDKEVDIDILEIKSKDMSAILVGEDIASQLERRIGFRRAVKQAVGRTMRMGAKGIKVTV 143
Query: 139 SGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGK 197
SG+L A+ A+S +++G + Q + ID AV G +GIKV W G+
Sbjct: 144 SGRLGGAEIARSESYREGSIPL--QTLRANIDYAVATAHTTYGAIGIKV-----WIYKGE 196
Query: 198 QGPTTPLPDLVTIHSPKD 215
P + + I + KD
Sbjct: 197 LAPGQTVDENENIRTSKD 214
>gi|15805346|ref|NP_294040.1| 30S ribosomal protein S3 [Deinococcus radiodurans R1]
gi|27734542|sp|Q9RXJ6.1|RS3_DEIRA RecName: Full=30S ribosomal protein S3
gi|6457991|gb|AAF09898.1|AE001892_9 ribosomal protein S3 [Deinococcus radiodurans R1]
Length = 249
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 11/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ +++ ++LA G + +E+ + +II A + V+G+ G I+EL +++
Sbjct: 38 QIRQLINKKLAAAGIARIEIERAGQQVNVIISAAKPGVVIGKGGESIKELRGDIERL--V 95
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+V + ++ N + A A + ++ A RRA + +MESGA+G +VI+S
Sbjct: 96 SAGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A++A++ K +G + P++ ID G+LGIKV +
Sbjct: 156 GRLGGAEQARTEKVLEGRV-----PLHTLRADIDYGTALARTTYGILGIKVLVF 204
>gi|342214879|ref|ZP_08707550.1| ribosomal protein S3 [Veillonella sp. oral taxon 780 str. F0422]
gi|341590410|gb|EGS33653.1| ribosomal protein S3 [Veillonella sp. oral taxon 780 str. F0422]
Length = 221
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 12/186 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD F + L+E L + L G S +E+ T R ++ I + V+G+ G
Sbjct: 21 KWYADKDFASNLHEDVKIRTFLKKTLFIAGISRIEIERTNKRIKVTIHTAKPGMVIGKGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ I ++ +++ F + +++ ++ + A AES+ +L ++ RRA +
Sbjct: 81 QGIEDIRKELKR---FTDKQIDVNIAEIKQVDMEAQLVAESIASQLERRVSFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
M GA G +V+VSG+L A+ A+S +++G + N ID A G +
Sbjct: 138 GRTMRLGANGIKVMVSGRLGGAEIARSESYREGSIPLHTLRAN--IDYATAEAHTTYGCI 195
Query: 183 GIKVKI 188
GIKV I
Sbjct: 196 GIKVWI 201
>gi|254468886|ref|ZP_05082292.1| ribosomal protein S3 [beta proteobacterium KB13]
gi|207087696|gb|EDZ64979.1| ribosomal protein S3 [beta proteobacterium KB13]
Length = 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L ++LA S + + ++ I R V+G+KG I L S +Q P
Sbjct: 41 EFLNKKLANAAVSKIIIERPAKNAKVTIMTARPGIVIGKKGEDIENLRSDLQGLMGIP-- 98
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
V+L E+V + A A+S+ +L + RRA ++ M GA+G +++ SG+L
Sbjct: 99 -VQLNIEEVRKPEIDATLIAQSIAQQLEKRVQFRRAMKRAMQNAMRLGAQGIKIMSSGRL 157
Query: 143 RA-QRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
+ A+S +++G + P++ ID V + G++GIKV I
Sbjct: 158 NGIEIARSEWYREGRV-----PLHTLRADIDYGVARAQTQYGIIGIKVWI 202
>gi|402836649|ref|ZP_10885183.1| ribosomal protein S3 [Mogibacterium sp. CM50]
gi|402270568|gb|EJU19828.1| ribosomal protein S3 [Mogibacterium sp. CM50]
Length = 287
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 20/191 (10%)
Query: 10 KFVADGVFFAEL----NEV---LTRELAEDGYSGVEV-RVTPMRTEIIIRATRTQNVLGE 61
K+ AD FA+ N+V + ++L G + V + R + +III R V+G
Sbjct: 21 KWYADKTNFADFLVEDNKVRNYVKKKLYAAGVASVVIERPAADKVKIIIATARPGMVIGR 80
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 121
G I EL + K +VE+ E+V L A AES+ L ++ RRA
Sbjct: 81 AGDGIDELKKSL---IKLTGKTVEISIEEVRRSELDAQLTAESIAQALERRVSFRRAMKS 137
Query: 122 VLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLL 177
++ +++GAKG +V+VSG+L A+ A+S K+ +G + P++ ID
Sbjct: 138 AIQRTVKAGAKGIKVLVSGRLGGAEIARSEKYSEGNV-----PLHTLRADIDYGFAEADT 192
Query: 178 RQGVLGIKVKI 188
G +G+KV I
Sbjct: 193 TYGKIGVKVWI 203
>gi|255536148|ref|YP_003096519.1| 30S ribosomal protein S3 [Flavobacteriaceae bacterium 3519-10]
gi|255342344|gb|ACU08457.1| SSU ribosomal protein S3p (S3e) [Flavobacteriaceae bacterium
3519-10]
Length = 251
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 87/174 (50%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ L L++ G S + + T + I R ++G+ G+ + +L ++K
Sbjct: 37 KIRRYLEARLSKGGISRIYIERTLKLVTVTITTARPGLIIGKGGQEVDKLKEELKK---I 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ +++ ++ L A+ A+S+ ++ ++ RRA ++ M GA+G +V +S
Sbjct: 94 TDKDIQINIFEIKRPELDAVLVADSIAKQIENRISYRRAVKMSIQSTMRMGAEGIKVQIS 153
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A+S FKDG + P++ + ID + L + G LG+KV IM
Sbjct: 154 GRLNGAEMARSESFKDGRI-----PLSTFRADIDYHIGEALTQYGKLGVKVWIM 202
>gi|229815769|ref|ZP_04446094.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM
13280]
gi|229808685|gb|EEP44462.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM
13280]
Length = 236
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ L + LA S VE+ + ++II R V+G+KG I L + ++K
Sbjct: 37 EIRRFLEKRLARAAVSRVEIERAGDKVKVIILTARPGVVIGKKGSEIDGLRTELEKVAGV 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ ++ + +V L A+ A+S+ +L G +A RRA ++ ++GAKG + S
Sbjct: 97 SKGNLSVDVIEVKRPELDAVLVAQSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCS 156
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQ 198
G+L A+ + +++G + + ID G G+KV W G++
Sbjct: 157 GRLGGAEMGRREWYREGRVPL--HTLRAKIDYGTATARTTMGSCGVKV-----WIYQGEK 209
Query: 199 GPTTPLPDL 207
P P+P++
Sbjct: 210 LPGQPVPNM 218
>gi|254556023|ref|YP_003062440.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
gi|254044950|gb|ACT61743.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
Length = 217
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ A+ F A LNE L + LA+ S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFAAYLNEDLRIRKYIEQRLADASVSTVEIERAANRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N +E + L A ES+ +L G +A RRA
Sbjct: 81 SEVEALRKELNNLTSKRVHI--NIIE-----IKKPDLDAKLVGESIARQLEGRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M SGAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDG 170
>gi|406915550|gb|EKD54621.1| hypothetical protein ACD_60C00063G0026 [uncultured bacterium]
Length = 228
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ E L +LA+ G S +++ +I + R ++G+ G+ + L + K K
Sbjct: 38 KVREYLYEKLAQAGISRIQIDRPARNAKITVYTARPGVIIGKSGKEVETLRDEINKILKV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E+V L A AE++ +L + RRA V+ M GAKG ++ VS
Sbjct: 98 P---VHVSIEEVRKPELDAKLVAEAVAQQLEKRVMFRRAMKRVVTTAMRLGAKGIKICVS 154
Query: 140 GKLRAQR-AKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+S +++G + P++ ID + GV+G+KV I
Sbjct: 155 GRLGGTEIARSEWYREGRV-----PLHTLRADIDYGLAEAFTTYGVIGVKVWIF 203
>gi|384487444|gb|EIE79624.1| hypothetical protein RO3G_04329 [Rhizopus delemar RA 99-880]
Length = 46
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/45 (55%), Positives = 31/45 (68%)
Query: 150 MKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDP 194
MKF DG+M+ SG E++ +AV HV L Q VLGIKVK L+ DP
Sbjct: 1 MKFVDGFMMHSGNFAREFMTTAVCHVDLCQAVLGIKVKSRLNNDP 45
>gi|289209323|ref|YP_003461389.1| 30S ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
gi|288944954|gb|ADC72653.1| ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
Length = 226
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 16/190 (8%)
Query: 11 FVADGVFFAE-------LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG F E L E L ++LA S + + I I+ R V+G+KG
Sbjct: 22 WYADGREFGETLNNDIKLREFLQKKLAHASVSRISISRPAKAAHITIQTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I +L V + + +V++ E+V + A AE + +L + RRA +
Sbjct: 82 EDIEKLRQDVARETGLEKGTVKINIEEVRKPEIEAQLVAEGIAQQLERRIMFRRAMKRAV 141
Query: 124 RFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
M GA+G +V VSG+L A+ A+S +++G + P++ ID
Sbjct: 142 GNAMRLGAQGIKVHVSGRLNGAEIARSEWYREGRV-----PLHTLRADIDYGFAEARTTY 196
Query: 180 GVLGIKVKIM 189
G++G+KV I
Sbjct: 197 GIIGVKVWIF 206
>gi|118595329|ref|ZP_01552676.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
gi|118441107|gb|EAV47734.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
Length = 292
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
K+ ++ FA L E L ++LA S + + +I I + R V+G+K
Sbjct: 21 KWYSNSKNFASLLQNDIKVREFLNKKLANAAVSRIVIERPAKNAKITIYSARPGIVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I L S +Q P V+L E++ + A A+S+ +L + RRA
Sbjct: 81 GEDIETLRSSLQSLMGIP---VQLNIEEIRKPEVDATLIAQSIAQQLEKRVMFRRAMKRA 137
Query: 123 LRFIMESGAKGCEVIVSGKLRA-QRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLR 178
++ M GA+G +++ SG+L + A+S +++G + P++ ID V
Sbjct: 138 MQNAMRLGAQGVKIMSSGRLNGIEIARSEWYREGRV-----PLHTLRADIDYGVARAQTT 192
Query: 179 QGVLGIKVKIM 189
G++GIKV I
Sbjct: 193 YGIIGIKVWIF 203
>gi|71083798|ref|YP_266518.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062]
gi|91207827|sp|Q4FLM4.1|RS3_PELUB RecName: Full=30S ribosomal protein S3
gi|71062911|gb|AAZ21914.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062]
Length = 226
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 25 LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
+ + + G S V + T + + I +R V+G+KG I ++ + + K F N V
Sbjct: 43 IKKNVVNSGVSKVMIERTSNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSK---FTNNEV 99
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA 144
L ++V A AE++ +L+ ++ RRA ++ + GAKG +V +SG+L
Sbjct: 100 TLNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGG 159
Query: 145 QR-AKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++G + S + ID A L G++GIK+ I
Sbjct: 160 NEIARTEWLREGSIPS--HTLRADIDYAEAEALTTFGIIGIKIWI 202
>gi|153210013|ref|ZP_01947564.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154706269|ref|YP_001425176.1| 30S ribosomal protein S3 [Coxiella burnetii Dugway 5J108-111]
gi|161830479|ref|YP_001596191.1| 30S ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165924132|ref|ZP_02219964.1| ribosomal protein S3 [Coxiella burnetii Q321]
gi|212213244|ref|YP_002304180.1| 30S ribosomal protein S3 [Coxiella burnetii CbuG_Q212]
gi|212218080|ref|YP_002304867.1| 30S ribosomal protein S3 [Coxiella burnetii CbuK_Q154]
gi|189044972|sp|A9KD25.1|RS3_COXBN RecName: Full=30S ribosomal protein S3
gi|189044973|sp|A9NAN0.1|RS3_COXBR RecName: Full=30S ribosomal protein S3
gi|226697691|sp|B6J5D8.1|RS3_COXB1 RecName: Full=30S ribosomal protein S3
gi|226697692|sp|B6J257.1|RS3_COXB2 RecName: Full=30S ribosomal protein S3
gi|120575196|gb|EAX31820.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154355555|gb|ABS77017.1| SSU ribosomal protein S3P [Coxiella burnetii Dugway 5J108-111]
gi|161762346|gb|ABX77988.1| ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165916414|gb|EDR35018.1| ribosomal protein S3 [Coxiella burnetii Q321]
gi|212011654|gb|ACJ19035.1| SSU ribosomal protein S3P [Coxiella burnetii CbuG_Q212]
gi|212012342|gb|ACJ19722.1| SSU ribosomal protein S3P [Coxiella burnetii CbuK_Q154]
Length = 227
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 36/223 (16%)
Query: 11 FVADGVFFAE-LNE------VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ AD FA+ LNE +L + L S +++ +III + R ++G+KG
Sbjct: 22 WYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERPARNAKIIIHSARPGVIIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I L + K K P V + E+V L A AE++ +L + RRA +
Sbjct: 82 GEIEALRDEISKVMKVP---VHITIEEVRKPELDAKLVAENIAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ + GA G ++ VSG+L A+ A++ +++G + P++ + ID A
Sbjct: 139 QNTLRQGALGVKISVSGRLGGAEIARTEWYREGRV-----PLHTFRADIDYATASAKTTY 193
Query: 180 GVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
G++G+KV W G+ +H+PK + E P
Sbjct: 194 GIIGVKV-----WIFKGE------------VHAPKPQAEEAAP 219
>gi|91763166|ref|ZP_01265130.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002]
gi|91717579|gb|EAS84230.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002]
Length = 226
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 25 LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSV 84
+ + + G S V + T + + I +R V+G+KG I ++ + + K F N V
Sbjct: 43 IKKNVVNSGVSKVMIERTSNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSK---FTNNEV 99
Query: 85 ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRA 144
L ++V A AE++ +L+ ++ RRA ++ + GAKG +V +SG+L
Sbjct: 100 TLNIKEVKKPETNAYLVAENIAQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGG 159
Query: 145 QR-AKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
A++ ++G + S + ID A L G++GIK+ I
Sbjct: 160 NEIARTEWLREGSIPS--HTLRADIDYAEAEALTTFGIIGIKIWI 202
>gi|429727115|ref|ZP_19261894.1| ribosomal protein S3 [Prevotella sp. oral taxon 473 str. F0040]
gi|429144819|gb|EKX87926.1| ribosomal protein S3 [Prevotella sp. oral taxon 473 str. F0040]
Length = 262
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 12/151 (7%)
Query: 42 TPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQ 101
TP I + +R ++G+ G+ + +L +QK V++ +V L A
Sbjct: 77 TPKLVTITVCTSRPGMIIGQGGKDVEQLKLQLQK---ITNKDVQINIFEVKKPDLDANIV 133
Query: 102 AESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSS 160
A+S+ ++ G +A RRA + M GA+G ++ +SG+L A+ A+S +K+G
Sbjct: 134 AKSIARQIEGKIAYRRAIKKAIENTMRGGAEGIKIQISGRLNGAEIARSEMYKEGRT--- 190
Query: 161 GQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
P++ + ID L + G+LGIKV I
Sbjct: 191 --PLHTFRADIDYCQTEALTKVGILGIKVWI 219
>gi|269104018|ref|ZP_06156715.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163916|gb|EEZ42412.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 232
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 14 DGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
DG F ++ + LT+ELA+ S + + + I R V+G+KG + +L + V
Sbjct: 34 DGDF--KVRQFLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAAV 91
Query: 74 QKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
K P N E+ +++ + L A + A L +++ A++RA +R GA
Sbjct: 92 AKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKRAVQNAMRL----GA 146
Query: 132 KGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVK 187
KG +V VSG+L A+ A++ +++G + P++ ID A + GV+GIKV
Sbjct: 147 KGIKVEVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATSSAHTQYGVIGIKVW 201
Query: 188 IM 189
I
Sbjct: 202 IF 203
>gi|374386806|ref|ZP_09644303.1| 30S ribosomal protein S3 [Odoribacter laneus YIT 12061]
gi|373223367|gb|EHP45717.1| 30S ribosomal protein S3 [Odoribacter laneus YIT 12061]
Length = 242
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L LA+ G + + + T I I R ++G+ G+ + +L ++K
Sbjct: 37 KIRKYLNARLAKAGIAKIVIERTLKLITITINTARPGIIIGKGGQEVDKLKEELKK---I 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ V++ ++ L A+ ++ +L G +A RRA ++ M GA+G +V++S
Sbjct: 94 TDKEVQINIFEIKRPELDAVIVGNNIARQLEGRVAYRRAIKMAVQSTMRMGAEGIKVLIS 153
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A++ FK+G + P++ + ID A L G+LGIKV I
Sbjct: 154 GRLNGAEMARAEIFKEGRI-----PLHTFRADIDYAQAEALTTYGLLGIKVWI 201
>gi|409427710|ref|ZP_11262203.1| 30S ribosomal protein S3 [Pseudomonas sp. HYS]
Length = 228
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 11 FVADG-----VFFAELN--EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG A+LN E L +L S +++ I I R V+G+KG
Sbjct: 22 WYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L + A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID A
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATYEAHTTY 193
Query: 180 GVLGIKVKIMLSWDPNGKQ---GPTTPLP 205
GV+G+KV I G+Q P P P
Sbjct: 194 GVIGVKVWIFKGEVIGGRQEELKPQAPAP 222
>gi|367470164|ref|ZP_09469880.1| SSU ribosomal protein S3p (S3e) [Patulibacter sp. I11]
gi|365814742|gb|EHN09924.1| SSU ribosomal protein S3p (S3e) [Patulibacter sp. I11]
Length = 281
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 17 FFAELNEVLTR---ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRI----REL 69
F E ++ T +LA G S + +R E+ IR R V+G+ G + ++L
Sbjct: 31 FLDEDRQIRTHIQTKLAHAGLSDITIRKNKNEVEVSIRTARPGVVIGKSGVEVDALRKDL 90
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ +K+ K N +E+ +++ + L A + AE L+ ++ A RRA L M S
Sbjct: 91 HRITKKQVKV--NILEVRRPELDAK-LVAQSVAEQLQNRV----AFRRAMKRALTSAMRS 143
Query: 130 GAKGCEVIVSGKL-RAQRAKSMKFKDG 155
GAKGC++ V G+L A+ +++ ++DG
Sbjct: 144 GAKGCKIQVGGRLGGAEMSRTESYQDG 170
>gi|70732876|ref|YP_262644.1| 30S ribosomal protein S3 [Pseudomonas protegens Pf-5]
gi|389681774|ref|ZP_10173118.1| ribosomal protein S3 [Pseudomonas chlororaphis O6]
gi|399006334|ref|ZP_10708861.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM17]
gi|425901874|ref|ZP_18878465.1| ribosomal protein S3 [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|91207831|sp|Q4K539.1|RS3_PSEF5 RecName: Full=30S ribosomal protein S3
gi|68347175|gb|AAY94781.1| ribosomal protein S3 [Pseudomonas protegens Pf-5]
gi|388554309|gb|EIM17558.1| ribosomal protein S3 [Pseudomonas chlororaphis O6]
gi|397892903|gb|EJL09379.1| ribosomal protein S3 [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|398122500|gb|EJM12092.1| ribosomal protein S3, bacterial type [Pseudomonas sp. GM17]
Length = 228
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 11 FVADG-----VFFAELN--EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG A+LN E L +L S +++ I I R V+G+KG
Sbjct: 22 WYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L + A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID A
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATYEAHTTY 193
Query: 180 GVLGIKVKIMLSWDPNGKQ---GPTTPLP 205
GV+G+KV I G+Q P P P
Sbjct: 194 GVIGVKVWIFKGEVIGGRQEELKPQAPAP 222
>gi|300767827|ref|ZP_07077737.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308180017|ref|YP_003924145.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|380031973|ref|YP_004888964.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|392948145|ref|ZP_10313760.1| SSU ribosomal protein S3p (S3e) [Lactobacillus pentosus KCA1]
gi|418274605|ref|ZP_12890103.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|448820604|ref|YP_007413766.1| 30S ribosomal protein S3 [Lactobacillus plantarum ZJ316]
gi|38258338|sp|Q88XY0.1|RS3_LACPL RecName: Full=30S ribosomal protein S3
gi|300494812|gb|EFK29970.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045508|gb|ADN98051.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|334882662|emb|CCB83707.1| 30S ribosomal protein S3 [Lactobacillus pentosus MP-10]
gi|339637291|emb|CCC16190.1| 30S ribosomal protein S3 [Lactobacillus pentosus IG1]
gi|342241216|emb|CCC78450.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|376010171|gb|EHS83497.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
NC8]
gi|392436590|gb|EIW14499.1| SSU ribosomal protein S3p (S3e) [Lactobacillus pentosus KCA1]
gi|448274101|gb|AGE38620.1| 30S ribosomal protein S3 [Lactobacillus plantarum ZJ316]
Length = 217
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ A+ F A LNE L + LA+ S VE+ R I I + V+G+ G
Sbjct: 21 KWYAEKDFAAYLNEDLRIRKYIEQRLADASVSTVEIERAANRVNISIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL ++ KR N +E + L A ES+ +L G +A RRA
Sbjct: 81 SEVEALRKELNNLTGKRVHI--NIIE-----IKKPDLDAKLVGESIARQLEGRVAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDG 155
G ++ M SGAKG + V+G+L A ++ + DG
Sbjct: 134 RGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDG 170
>gi|288942066|ref|YP_003444306.1| 30S ribosomal protein S3 [Allochromatium vinosum DSM 180]
gi|288897438|gb|ADC63274.1| ribosomal protein S3 [Allochromatium vinosum DSM 180]
Length = 225
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
K+ A+ +A+L + L +ELA+ S +++ I I R V+G+K
Sbjct: 21 KWYANSKDYADLLNTDLQVRDFLRKELAKASVSRIQIDRPAKNAHITIHTARPGVVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I +L + V + P V + E++ L A AE + +L + RRA
Sbjct: 81 GEDIDKLRAKVSEMMGIP---VHIAIEEIRKPELDAQLVAEGIAQQLERRIMFRRAMKRS 137
Query: 123 LRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLR 178
++ M GA+G +V V+G+L A+ A+S ++G + P++ ID
Sbjct: 138 IQNTMRLGAEGIKVSVAGRLNGAEIARSEWAREGRV-----PLHTLRADIDYGFAEAKTT 192
Query: 179 QGVLGIKVKIMLSWDPNGKQGPTTPLP 205
GVLG+KV I + G Q P P P
Sbjct: 193 YGVLGVKVWIFKG-EVFGDQLPEEPAP 218
>gi|257067054|ref|YP_003153310.1| 30S ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
gi|256798934|gb|ACV29589.1| ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
Length = 238
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 12/187 (6%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
K+ AD F++L +++ +E+ + G S +E+ +I + A + V+G+
Sbjct: 21 KWFADKKDFSDLLVEDYNIRKIVKKEVYDAGISDIEIERAVNNLKITVFAGKPGMVIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL ++K P + + E++ + L A AE++ +L +A RRA
Sbjct: 81 GSGVEELKKKLEKVA--PGRRIIINVEEIKYQDLSAQLVAENIANQLENRVAFRRAMKQS 138
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
++ M +GAKG + +VSG+L A A+S + +G + Q + ID G
Sbjct: 139 MQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPL--QTLRANIDYGFAEADTEYGK 196
Query: 182 LGIKVKI 188
+G KV I
Sbjct: 197 IGCKVWI 203
>gi|410638210|ref|ZP_11348774.1| small subunit ribosomal protein S3 [Glaciecola lipolytica E3]
gi|410142130|dbj|GAC15979.1| small subunit ribosomal protein S3 [Glaciecola lipolytica E3]
Length = 233
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 13 ADGVFF-AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
AD +F ++ + LT+EL S + + + I R V+G+KG + +L
Sbjct: 30 ADNLFNDHQVRKYLTKELKNASLSKIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRK 89
Query: 72 VVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
V K P N E+ +++ + L A + + L +++ A++RA +R
Sbjct: 90 FVSKLAGVPAQINIAEVRKPELDGQ-LVADSISSQLERRVMFRRAMKRAVQNAMRL---- 144
Query: 130 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIK 185
GAKG +V VSG+L A+ A+S +++G + P++ + ID A L G++G+K
Sbjct: 145 GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTFRADIDYATSEALTTYGIIGVK 199
Query: 186 VKIM 189
V I
Sbjct: 200 VWIF 203
>gi|374852498|dbj|BAL55430.1| 30S ribosomal protein S3 [uncultured beta proteobacterium]
Length = 255
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
+I I R V+G+KG I +L + +R P ++ E+V L A AES+
Sbjct: 65 KITIHTARPGVVIGKKGEDIEKLRQEISERLGIP---AQVAIEEVRKPELDAQLVAESIA 121
Query: 107 YKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVN 165
+L + RRA ++ M GAKG +V+ SG+L A+ A+S +++G + P++
Sbjct: 122 NQLEKRIQFRRAMKRAMQSAMRLGAKGIKVMTSGRLNGAEIARSEWYREGRV-----PLH 176
Query: 166 EY---IDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPD 206
ID GV+G+KV I N Q P P+
Sbjct: 177 TLRADIDYGFAEARTTYGVIGVKVWIYKGDVLNRNQSPVAASPE 220
>gi|76789259|ref|YP_328345.1| 30S ribosomal protein S3 [Chlamydia trachomatis A/HAR-13]
gi|91207647|sp|Q3KLH5.1|RS3_CHLTA RecName: Full=30S ribosomal protein S3
gi|76167789|gb|AAX50797.1| SSU ribosomal protein S3P [Chlamydia trachomatis A/HAR-13]
Length = 224
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
KF+ + V ++ E L ++ + G +G V+ + E+ I R V+G+KG + L
Sbjct: 31 KFLIEDV---KIREFLKKKPSCQGAAGFVVKRMSGKIEVTIHTARPGLVIGKKGAEVESL 87
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ ++K V + +V L A A+ + ++ ++ RRA L+ +M++
Sbjct: 88 KAELKK---LTGKDVWVEIAEVKRPELNAQLVADGIAKQIERRVSFRRAMKKALQSVMDA 144
Query: 130 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIK 185
GA G +V VSG+L A+ A+S +K+G + P++ ID A G++GIK
Sbjct: 145 GALGVKVQVSGRLAGAEIARSEWYKNGRV-----PLHTLRADIDYATASAETTYGIIGIK 199
Query: 186 VKIMLS 191
V I LS
Sbjct: 200 VWINLS 205
>gi|429212579|ref|ZP_19203744.1| 30S ribosomal protein S3 [Pseudomonas sp. M1]
gi|428157061|gb|EKX03609.1| 30S ribosomal protein S3 [Pseudomonas sp. M1]
Length = 228
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 17/198 (8%)
Query: 17 FFAELN--EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
FA+L E L +L S +++ I I R V+G+KG + +L +
Sbjct: 33 LFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEKLRQDLT 92
Query: 75 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 134
K+ P V + E++ L ++ A+S+ +L + RRA ++ M GAKG
Sbjct: 93 KQMGVP---VHINIEEIRKPELDSMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIGAKGI 149
Query: 135 EVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIML 190
++ VSG+L A+ A++ +++G + P++ ID A GV+G+KV I
Sbjct: 150 KIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATYEAHTTYGVIGVKVWIFK 204
Query: 191 SWDPNGKQ---GPTTPLP 205
G+Q P P P
Sbjct: 205 GEVIGGRQEELKPVAPAP 222
>gi|206901441|ref|YP_002250707.1| 30S ribosomal protein S3 [Dictyoglomus thermophilum H-6-12]
gi|226697700|sp|B5YDU9.1|RS3_DICT6 RecName: Full=30S ribosomal protein S3
gi|206740544|gb|ACI19602.1| ribosomal protein S3 [Dictyoglomus thermophilum H-6-12]
Length = 245
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 7/199 (3%)
Query: 25 LTRELAEDGYSGVEV-RVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
L + + G S +E+ R R +I I R ++G G E+ ++ + K +
Sbjct: 43 LKKNYYQAGISLIEIERKAANRVDITIHTARPGMLIGRGGS---EIENIRKNLIKLTNKN 99
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
V + ++V N L A AE++ ++ + +RA + + +GAKG +V+ SG+L
Sbjct: 100 VFVNVQEVKNPELDAQLVAENIAMQIEKRINYKRAMKQAINRALRAGAKGIKVMCSGRLN 159
Query: 144 -AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTT 202
A+ A+S F++G + Q + ID GV+G+KV I P +
Sbjct: 160 GAEIARSEWFREGRI--PLQTLTADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEAIQ 217
Query: 203 PLPDLVTIHSPKDEEEYVK 221
LP+ +DE+ Y K
Sbjct: 218 ELPEKAVPKKIEDEDLYEK 236
>gi|269798544|ref|YP_003312444.1| 30S ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282849870|ref|ZP_06259253.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294792800|ref|ZP_06757947.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
gi|294794554|ref|ZP_06759690.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|417000155|ref|ZP_11940476.1| ribosomal protein S3 [Veillonella parvula ACS-068-V-Sch12]
gi|269095173|gb|ACZ25164.1| ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282580307|gb|EFB85707.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294454884|gb|EFG23257.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|294456699|gb|EFG25062.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
gi|333976236|gb|EGL77106.1| ribosomal protein S3 [Veillonella parvula ACS-068-V-Sch12]
Length = 222
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 19/203 (9%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDATLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
M GAKG +++VSG+L A+ A+S +++G + P++ ID
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSI-----PLHTLRADIDYGTAEAHTTY 192
Query: 180 GVLGIKVKIMLSWD-PNGKQGPT 201
G +GIKV I P KQ P
Sbjct: 193 GCIGIKVWIYKGEVLPEAKQAPA 215
>gi|344337603|ref|ZP_08768537.1| ribosomal protein S3 [Thiocapsa marina 5811]
gi|343802556|gb|EGV20496.1| ribosomal protein S3 [Thiocapsa marina 5811]
Length = 225
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ L +ELA+ S +++ I I R V+G+KG I +L + V K
Sbjct: 38 EVRSFLRKELAKASVSRIQIDRPAKNAHITIHTARPGVVIGKKGEDIDKLRARVSKMMGI 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V + E++ L A AE + +L + RRA ++ M GA+G V V+
Sbjct: 98 P---VHISIEEIRKPELDAQLVAEGIAQQLERRIMFRRAMKRAIQNTMRLGAEGVRVNVA 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIMLSWDPN 195
G+L A+ A++ ++G + P++ ID GV+G+KV I +
Sbjct: 155 GRLNGAEIARTEWAREGRV-----PLHTLRADIDYGFAEARTTYGVIGVKVWIFKG-EVF 208
Query: 196 GKQGPTTPLP 205
G Q P P P
Sbjct: 209 GDQIPEEPAP 218
>gi|291296985|ref|YP_003508383.1| 30S ribosomal protein S3 [Meiothermus ruber DSM 1279]
gi|290471944|gb|ADD29363.1| ribosomal protein S3 [Meiothermus ruber DSM 1279]
Length = 253
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 2/122 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ ++ +EL + G + +++ +++ A + V+G G I+ L +Q RF P
Sbjct: 39 IRALIEKELHQAGLARIDIERAADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRF--P 96
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
+V L ++V N L A A+ + ++ AVRR+ ++ + ESGA G +++VSG
Sbjct: 97 GKTVALNVQEVGNPNLSAPLVAQRVAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSG 156
Query: 141 KL 142
++
Sbjct: 157 RI 158
>gi|406969023|gb|EKD93749.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 226
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 6/166 (3%)
Query: 25 LTRELAEDGY-SGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
R+ ++GY + +E+ RT +II +R V+G +G I + +++ F+ + S
Sbjct: 42 FVRKHFKEGYIAKIEILRDANRTTLIIHTSRPGTVIGRQGEGIEKFQEILEGMFRQQKFS 101
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLR 143
+ + +++ N L A AES+ ++ ++ RRA ++ ME+GAKG ++ V G+L
Sbjct: 102 ISV--KEIKNPDLDAYIVAESITKQIARRVSYRRAVKTAIQRGMENGAKGIKIGVKGRLN 159
Query: 144 A-QRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKI 188
+ A++ +G + N +D A GV+G+KV I
Sbjct: 160 GVEIARAETTSEGKIPLHTLRAN--VDYAYVPAQTTYGVIGVKVWI 203
>gi|375091974|ref|ZP_09738261.1| ribosomal protein S3 [Helcococcus kunzii ATCC 51366]
gi|374562192|gb|EHR33524.1| ribosomal protein S3 [Helcococcus kunzii ATCC 51366]
Length = 240
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 89/187 (47%), Gaps = 13/187 (6%)
Query: 10 KFVADGVFFAEL----NEV---LTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
K+ AD F++L N++ + R + G S +++ T R ++ + + ++G+
Sbjct: 21 KWFADKKEFSKLLAEDNKIRNYVKRSQFQAGVSKIDIERTLNRIKVTVNTAKPGMIIGKG 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G + EL + ++K + V + E+V N + A QAE + L + RRA
Sbjct: 81 GAGVEELKNALEK---MTKKQVIVNVEEVKNTAVNAQLQAERIASDLERRITFRRAMKQA 137
Query: 123 LRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGV 181
++ M++GAKG + VSG+L A A++ + +G + Q + ID G
Sbjct: 138 IQTTMKAGAKGMKTQVSGRLGGADMARTEGYSEGNIPL--QTLRADIDYGFAEADTTYGK 195
Query: 182 LGIKVKI 188
LG+KV I
Sbjct: 196 LGVKVWI 202
>gi|210631088|ref|ZP_03296744.1| hypothetical protein COLSTE_00629 [Collinsella stercoris DSM 13279]
gi|210160176|gb|EEA91147.1| ribosomal protein S3 [Collinsella stercoris DSM 13279]
Length = 236
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 8/189 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ L + LA S VE+ + ++II R V+G+KG I L + +++
Sbjct: 37 EIRRFLEKRLARAAVSRVEIERAGDKVKVIILTARPGVVIGKKGSEIDGLRTELERVAGV 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ ++ + +V L A+ A+S+ +L G +A RRA ++ ++GAKG + S
Sbjct: 97 TKGNLSVDVIEVKRPELDAVLVAQSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCS 156
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQ 198
G+L A+ + +++G + + ID G G+KV W G++
Sbjct: 157 GRLGGAEMGRREWYREGRVPL--HTLRAKIDYGTATAHTTMGSCGVKV-----WIYQGEK 209
Query: 199 GPTTPLPDL 207
P P+P++
Sbjct: 210 LPGQPVPNM 218
>gi|156743942|ref|YP_001434071.1| 30S ribosomal protein S3 [Roseiflexus castenholzii DSM 13941]
gi|156235270|gb|ABU60053.1| ribosomal protein S3 [Roseiflexus castenholzii DSM 13941]
Length = 260
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 18/209 (8%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L +++ +EL G + +++ + + E+ + + V+G++G ++ EL + +R
Sbjct: 38 LRKIIAKELENAGVARIDIERSANKVEVTVHTAKPGIVIGKRGAKVDELREELARRTG-- 95
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSG 140
V+L ++++ L A AES+ ++ ++ +RA ++ M GA+G ++ SG
Sbjct: 96 -KKVKLNIQEIHQPELEAQLVAESIAEQINKRVSYKRAMKQAVQRAMRLGAQGVKIKCSG 154
Query: 141 KLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM---LSWD 193
+L A+ A+ +DG + P++ ID A H G +G+KV I + D
Sbjct: 155 RLAGAEMARIAWERDGRV-----PLHTLRADIDYAQVHAHTTYGRIGVKVWIYKGDVFPD 209
Query: 194 PNGKQGPTTPLPDLVTIHSPKDEEEYVKP 222
G+ PT P +V S EEE +P
Sbjct: 210 QKGQLQPTQP---VVAARSSAVEEEEDRP 235
>gi|15605251|ref|NP_220037.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/UW-3/CX]
gi|385243729|ref|YP_005811575.1| 30S ribosomal protein S3 [Chlamydia trachomatis D-EC]
gi|385244609|ref|YP_005812453.1| 30S ribosomal protein S3 [Chlamydia trachomatis D-LC]
gi|7388191|sp|O84527.1|RS3_CHLTR RecName: Full=30S ribosomal protein S3
gi|3328959|gb|AAC68123.1| S3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|297748652|gb|ADI51198.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-EC]
gi|297749532|gb|ADI52210.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-LC]
gi|440525446|emb|CCP50697.1| 30S ribosomal protein S3 [Chlamydia trachomatis K/SotonK1]
gi|440528123|emb|CCP53607.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/SotonD5]
gi|440529013|emb|CCP54497.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/SotonD6]
gi|440532587|emb|CCP58097.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/SotonG1]
Length = 224
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 15/185 (8%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIREL 69
KF+ + V ++ E L ++ + G +G V+ + E+ I R V+G+KG + L
Sbjct: 31 KFLIEDV---KIREFLKKKPSCQGAAGFVVKRMSGKIEVTIHTARPGLVIGKKGAEVESL 87
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
+ ++K + V + +V L A A+ + ++ ++ RRA L+ +M++
Sbjct: 88 KAELKK---LTDKDVWVEIAEVKRPELNAQLVADGIAKQIERRVSFRRAMKKALQSVMDA 144
Query: 130 GAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIK 185
GA G +V VSG+L A+ A+S +K+G + P++ ID A G++GIK
Sbjct: 145 GALGVKVQVSGRLAGAEIARSEWYKNGRV-----PLHTLRADIDYATASAETTYGIIGIK 199
Query: 186 VKIML 190
V I L
Sbjct: 200 VWINL 204
>gi|406996300|gb|EKE14707.1| Ribosomal protein S3 [uncultured bacterium]
Length = 212
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 90/189 (47%), Gaps = 7/189 (3%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 64
S KR F + ++ +VL +LA + +++ R +II A + ++G G+
Sbjct: 24 FSNKRAFKDSLISDLKIRKVLMNKLAFSSVTQIDIERAINRITLIIYAVKVGMIIGRGGK 83
Query: 65 RIRELTSVV----QKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+ E+ V +K K E +++ E V L + A+ + KL+ R +
Sbjct: 84 GLEEIKQFVLDNLKKGEKVKELKIDIKIEPVKKPFLNSYYVAQLVAEKLVKNFPHRSTVH 143
Query: 121 GVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQ 179
+ +ME+GAKG ++ + G++ A+ ++ K+ G + +S + E +D A L R
Sbjct: 144 NAMNKVMEAGAKGVKIQLGGRVGGAEISRREKYFLGSVPTS--TIREDVDLARYPALTRS 201
Query: 180 GVLGIKVKI 188
G +G+KV I
Sbjct: 202 GYVGVKVWI 210
>gi|336123179|ref|YP_004565227.1| 30S ribosomal protein S3P [Vibrio anguillarum 775]
gi|365539184|ref|ZP_09364359.1| 30S ribosomal protein S3 [Vibrio ordalii ATCC 33509]
gi|335340902|gb|AEH32185.1| SSU ribosomal protein S3P [Vibrio anguillarum 775]
Length = 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+EL++ S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQFLTKELSKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
+ GV+G+KV I
Sbjct: 188 SAHTQYGVIGVKVWIF 203
>gi|346312031|ref|ZP_08854025.1| 30S ribosomal protein S3 [Collinsella tanakaei YIT 12063]
gi|345899125|gb|EGX68976.1| 30S ribosomal protein S3 [Collinsella tanakaei YIT 12063]
Length = 236
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + L+ S VE+ + ++II R V+G+KG I L + ++K
Sbjct: 37 EIRKFLNKRLSRAAVSRVEIERAGDKVKVIILTARPGIVIGKKGAEIDGLRTELEKVAGV 96
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ + + ++ L A A+S+ +L G +A RRA ++ M++GAKG + S
Sbjct: 97 AKGQLSVDVIEIKRPELDANLVAQSIAEQLEGRVAFRRAMRKAVQSAMKAGAKGIRIQCS 156
Query: 140 GKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQ 198
G+L A+ + +++G + + ID G G+KV I L G++
Sbjct: 157 GRLGGAEMGRREWYREGRVPL--HTLRAKIDYGTSTAHTTMGSCGVKVWIYL-----GEK 209
Query: 199 GPTTPLPD 206
P P+P+
Sbjct: 210 LPGQPVPN 217
>gi|345870980|ref|ZP_08822929.1| ribosomal protein S3 [Thiorhodococcus drewsii AZ1]
gi|343921134|gb|EGV31858.1| ribosomal protein S3 [Thiorhodococcus drewsii AZ1]
Length = 225
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 10 KFVADGVFFAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 62
K+ A+ +A+L + L +ELA+ S +++ I I R V+G+K
Sbjct: 21 KWYANSKDYADLLNTDLQVRDFLRKELAKASVSRIQINRPAKNAHITIHTARPGVVIGKK 80
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 122
G I +L + V P V + E++ L A AE + +L + RRA
Sbjct: 81 GEDIDKLRTKVSAMMGIP---VHISIEEIRKPELDAQLVAEGIAQQLERRIMFRRAMKRS 137
Query: 123 LRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLR 178
++ M GA+G +V V+G+L A+ A+S ++G + P++ ID
Sbjct: 138 IQNTMRLGAEGIKVNVAGRLNGAEIARSEWAREGRV-----PLHTLRADIDYGFAEAKTT 192
Query: 179 QGVLGIKVKIMLSWDPNGKQGPTTPLP 205
G+LG+KV I + G+Q P P P
Sbjct: 193 YGILGVKVWIFKG-EVFGEQLPEEPAP 218
>gi|193875764|gb|ACF24518.1| 40S ribosomal protein S3 [Gymnochlora stellata]
Length = 255
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 44/67 (65%)
Query: 123 LRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
L++IM +GA+GC + + G +++R ++++F G++ +G + D ++ ++GV+
Sbjct: 160 LKYIMRNGARGCLIQIKGAHKSKRTRTVRFTRGFVSYAGGANARWTDGYHFNLKKKRGVI 219
Query: 183 GIKVKIM 189
GIK+KI+
Sbjct: 220 GIKIKIL 226
>gi|330447031|ref|ZP_08310681.1| ribosomal protein S3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491222|dbj|GAA05178.1| ribosomal protein S3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 229
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 18/182 (9%)
Query: 14 DGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
DG F ++ + LT+ELA+ S + + + I R V+G+KG + +L + V
Sbjct: 34 DGDF--KVRQFLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDVEKLRAAV 91
Query: 74 QKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGA 131
K P N E+ +++ + L A + A L +++ A++RA +R GA
Sbjct: 92 AKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKRAVQNAMRL----GA 146
Query: 132 KGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVK 187
KG +V VSG+L A+ A++ +++G + P++ ID A + GV+G+KV
Sbjct: 147 KGIKVEVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYATSSAHTQYGVIGVKVW 201
Query: 188 IM 189
I
Sbjct: 202 IF 203
>gi|406948557|gb|EKD79248.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 250
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 28 ELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
+L + G S VE+R + I IR ++ ++G G + EL ++++F F ++++
Sbjct: 46 KLRDGGVSRVEIRRANDQMNIHIRTSKPGVIIGRSGAGVEELKRQIKRQF-FGSEKMKIF 104
Query: 88 AE--KVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
E +V N + A + + ++L + RRA + +M+ GAKG ++IVSG+L
Sbjct: 105 IEIEEVRNPDIDAELIMQGIVFQLEKRIPFRRAMKRAIEQVMQGGAKGVKIIVSGRL 161
>gi|313893202|ref|ZP_07826779.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
gi|313442555|gb|EFR60970.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
Length = 221
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYADKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDATLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
M GAKG +++VSG+L A+ A+S +++G + + ID G +
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPL--HTLRADIDYGTAEAHTTYGCI 195
Query: 183 GIKVKI 188
GIKV I
Sbjct: 196 GIKVWI 201
>gi|242309325|ref|ZP_04808480.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
gi|239523896|gb|EEQ63762.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
Length = 235
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L +EL G S + + T + + + A R ++G+KG + +L ++K
Sbjct: 38 KIRKFLKKELYYAGVSDILIERTARKVRVTVVAARPGIIIGKKGADVEKLKESLKK---I 94
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ L ++V A AES+ +L +A RRA V++ M+SGAKG +V VS
Sbjct: 95 VNKDIFLNIKEVKKPQSNAQLSAESVATQLERRVAFRRAMKKVMQGAMKSGAKGIKVKVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A++ + +G + + ID L G +G+KV I
Sbjct: 155 GRLAGAEMARTEWYMEGRIPL--HTLRAKIDYGFAEALTTYGNIGVKVWIF 203
>gi|148982468|ref|ZP_01816770.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3]
gi|417949247|ref|ZP_12592385.1| 30S ribosomal protein S3 [Vibrio splendidus ATCC 33789]
gi|145960459|gb|EDK25836.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3]
gi|342808641|gb|EGU43790.1| 30S ribosomal protein S3 [Vibrio splendidus ATCC 33789]
Length = 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+EL + S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQFLTKELQKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
+ GV+GIKV I
Sbjct: 188 SAHTQYGVIGIKVWIF 203
>gi|335420829|ref|ZP_08551864.1| 30S ribosomal protein S3 [Salinisphaera shabanensis E1L3A]
gi|334894131|gb|EGM32338.1| 30S ribosomal protein S3 [Salinisphaera shabanensis E1L3A]
Length = 226
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + + +LA S +++ I I R V+G+KG I +L + V +R
Sbjct: 38 EIRDFIREKLAHASVSRIQIDRPARSARITIHTARPGIVIGKKGEDIDKLRAEVSERMGV 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
P V L E++ L A+ A+++ +L + RRA + M GA G V V+
Sbjct: 98 P---VHLSVEEIRRPELDALLVAQNIAQQLERRIMFRRAMKRAVGNAMRLGAGGIRVNVA 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A++ ++DG + + ID + GVLG+KV I
Sbjct: 155 GRLNGAEIARTEWYRDGRVPL--HTLRADIDYGLAEAKTTYGVLGVKVWIF 203
>gi|312870506|ref|ZP_07730625.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
gi|417886842|ref|ZP_12530986.1| ribosomal protein S3 [Lactobacillus oris F0423]
gi|311093968|gb|EFQ52293.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
gi|341593233|gb|EGS36090.1| ribosomal protein S3 [Lactobacillus oris F0423]
Length = 221
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFANYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE + L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVE-----IKKPDLDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG + V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKI 188
GVLG+K I
Sbjct: 189 NTTYGVLGVKTWI 201
>gi|160872272|ref|ZP_02062404.1| ribosomal protein S3 [Rickettsiella grylli]
gi|159121071|gb|EDP46409.1| ribosomal protein S3 [Rickettsiella grylli]
Length = 263
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 13/192 (6%)
Query: 2 ATQISKKRKFVADGVFFA-ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
A +KK + AD +++ +++ + L + G S +++ +++I I + V+G
Sbjct: 20 ARWYAKKSREYADNLYYDLSARKLIEKALLQAGVSSIQIERAARKSKITISVAKPGVVIG 79
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
+KG I +L ++K + P V L +V L A AE++ +L + RRA
Sbjct: 80 KKGEYIDQLRDQLEKIMRVP---VRLSVLEVKKPELDAKLVAENIAQQLERRVMFRRAMK 136
Query: 121 GVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVL 176
++ + GA G ++ V+G+L A+ A+S ++++G + P++ + ID A+
Sbjct: 137 RAVQTALRLGALGIKITVAGRLGGAEIARSERYQEGSV-----PLHTFRADIDYALAEAQ 191
Query: 177 LRQGVLGIKVKI 188
G LG+KV I
Sbjct: 192 TTYGKLGVKVWI 203
>gi|303230141|ref|ZP_07316910.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
gi|303231249|ref|ZP_07317987.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|401680975|ref|ZP_10812884.1| ribosomal protein S3 [Veillonella sp. ACP1]
gi|429760920|ref|ZP_19293368.1| ribosomal protein S3 [Veillonella atypica KON]
gi|302514156|gb|EFL56160.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|302515202|gb|EFL57175.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
gi|400218030|gb|EJO48916.1| ribosomal protein S3 [Veillonella sp. ACP1]
gi|429176108|gb|EKY17509.1| ribosomal protein S3 [Veillonella atypica KON]
Length = 221
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 10 KFVADGVFFAELNE------VLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ A+ F A L+E L L G S +E+ T R ++ I + V+G G
Sbjct: 21 KWYAEKDFAANLHEDVKIRNFLKETLFIAGISRIEIERTNKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ + + F + V++ ++ + A+ AE++ +L + RRA +
Sbjct: 81 AGIEDIKKAMTR---FTDKQVDVNIAEIKQADMDAVLVAENIAGQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
M GAKG +++VSG+L A+ A+S +++G + N ID G +
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRAN--IDYGTAEAHTTYGCI 195
Query: 183 GIKVKI 188
GIKV I
Sbjct: 196 GIKVWI 201
>gi|259502537|ref|ZP_05745439.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
gi|259169489|gb|EEW53984.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
Length = 221
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 10 KFVADGVFFAELNEVL------TRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD F LNE L + LA+ S VE+ R + I + V+G+ G
Sbjct: 21 KWYADKDFANYLNEDLRIRKYIEKRLADASVSTVEIERAANRVNVSIHTAKPGMVIGKGG 80
Query: 64 RRI----RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 119
+ +EL + KR N VE + L A ES+ +L +A RRA
Sbjct: 81 SEVEALRKELNKLTGKRVHI--NIVE-----IKKPDLDAHLVGESIARQLEARIAFRRAM 133
Query: 120 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHV 175
G ++ M +GAKG + V+G+L A ++ + DG + P++ ID +
Sbjct: 134 RGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTV-----PLHTLRADIDYSWDEA 188
Query: 176 LLRQGVLGIKVKI 188
GVLG+K I
Sbjct: 189 NTTYGVLGVKTWI 201
>gi|422640801|ref|ZP_16704227.1| 30S ribosomal protein S3 [Pseudomonas syringae Cit 7]
gi|330953191|gb|EGH53451.1| 30S ribosomal protein S3 [Pseudomonas syringae Cit 7]
Length = 228
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 11 FVADG-----VFFAELN--EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
+ ADG FA+L E L +L S +++ I I R V+G+KG
Sbjct: 22 WYADGRTYADYLFADLKVREYLQNKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKG 81
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
+ +L + K+ P V + E++ L + A+S+ +L + RRA +
Sbjct: 82 EDVEKLRQDLTKQMGVP---VHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAV 138
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQ 179
+ M GAKG ++ VSG+L A+ A++ +++G + P++ ID A
Sbjct: 139 QNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRV-----PLHTLRADIDYANYEAHTTY 193
Query: 180 GVLGIKVKIMLSWDPNGKQ---GPTTPLP 205
GV+G+KV I G+Q P P P
Sbjct: 194 GVIGVKVWIFKGEVIGGRQEELKPQAPAP 222
>gi|221133620|ref|ZP_03559925.1| 30S ribosomal protein S3 [Glaciecola sp. HTCC2999]
Length = 234
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 13 ADGVFF-AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTS 71
AD +F ++ + LT++L S + + ++ I R V+G+KG + +L +
Sbjct: 30 ADNLFNDHQVRQYLTKQLKSASLSKIVIERPAKSIKVTIHTARPGVVIGKKGEDVEKLRN 89
Query: 72 VVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 129
V K P N E+ +++ + L A + + L +++ A++RA +R
Sbjct: 90 HVSKLAGVPAQINIAEVRKPELDGQ-LVADSISSQLERRVMFRRAMKRAVQNAMRL---- 144
Query: 130 GAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIK 185
GAKG +V VSG+L A+ A+S +++G + P++ + ID A G++G+K
Sbjct: 145 GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTFRADIDYATSEANTTYGIIGVK 199
Query: 186 VKI----MLSWDPNGKQGPTTPLP 205
V I +L P ++ P P P
Sbjct: 200 VWIFKGEVLGGLPLTQEQPAAPAP 223
>gi|260772102|ref|ZP_05881019.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14]
gi|260612969|gb|EEX38171.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14]
Length = 232
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+ELA+ S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQYLTKELAKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRAAVAKIAGVPAQINISEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
GV+G+KV I
Sbjct: 188 SAHTTYGVIGVKVWIF 203
>gi|325280962|ref|YP_004253504.1| 30S ribosomal protein S3 [Odoribacter splanchnicus DSM 20712]
gi|324312771|gb|ADY33324.1| ribosomal protein S3 [Odoribacter splanchnicus DSM 20712]
Length = 244
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 85/173 (49%), Gaps = 12/173 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
++ + L LA+ G + + + T I I R ++G+ G+ + +L ++K
Sbjct: 37 KIRKYLNARLAKAGIAKIVIERTLKLITITINTARPGIIIGKGGQEVDKLKEELKK---I 93
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
+ V++ ++ L A+ ++ +L G +A RRA + M GA+G ++++S
Sbjct: 94 TDKEVQINIFEIKRPELDAVIVGNNIARQLEGRVAYRRAIKMAIASTMRMGAEGIKILIS 153
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKI 188
G+L A+ A++ FK+G P++ + ID A L G+LGIKV I
Sbjct: 154 GRLNGAEMARAEMFKEGRT-----PLHTFRADIDFAQAEALTTYGLLGIKVWI 201
>gi|377555752|ref|ZP_09785480.1| SSU ribosomal protein S3P [endosymbiont of Bathymodiolus sp.]
Length = 230
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L +L S V++ +I I R V+G+KG I L S+V K
Sbjct: 38 EVRDFLFEKLKSASVSRVQIERLANNAKITIHTARPGIVIGKKGADIESLKSIVTKMMGM 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVS 139
S + E++ L + AE++ +L + RRA VL GA+G +V+VS
Sbjct: 98 ---SAHINIEEIKKPELDSRLVAENIAQQLEKRVMYRRAVKRVLGNATRLGAQGIKVMVS 154
Query: 140 GKLR-AQRAKSMKFKDGYMVSSGQPVNEY---IDSAVRHVLLRQGVLGIKVKIM 189
G+L A+ A+S +++G + P++ + ID A + GV+GIKV I
Sbjct: 155 GRLNGAEIARSEWYREGRV-----PLHTFRADIDYAHYGANTQYGVIGIKVWIF 203
>gi|427413160|ref|ZP_18903352.1| ribosomal protein S3 [Veillonella ratti ACS-216-V-Col6b]
gi|425715976|gb|EKU78962.1| ribosomal protein S3 [Veillonella ratti ACS-216-V-Col6b]
Length = 222
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 10 KFVADGVFFAELNE-VLTRELAED-----GYSGVEVRVTPMRTEIIIRATRTQNVLGEKG 63
K+ AD + A L+E VL R + G S +E+ R ++ I + V+G G
Sbjct: 21 KWYADKDYAANLHEDVLIRNFLKKTLFIAGISRIEIERINKRIKLTIHTAKPGMVIGRGG 80
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVL 123
I ++ +++ F + +++ ++ + ++ AE++ +L + RRA +
Sbjct: 81 AGIEDIRKALKR---FTDKQIDVNIAEIKQADMDSVLVAENIASQLERRIGFRRAMKQAV 137
Query: 124 RFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVL 182
M GAKG +++VSG+L A+ A+S +++G + N ID G +
Sbjct: 138 GRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRAN--IDYGTAEAHTTYGCI 195
Query: 183 GIKVKIMLSWD-PNGKQGPT 201
GIKV I P KQ P
Sbjct: 196 GIKVWIYKGEVLPEAKQAPA 215
>gi|260770919|ref|ZP_05879848.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972]
gi|375129793|ref|YP_004991891.1| 30S ribosomal protein S3 [Vibrio furnissii NCTC 11218]
gi|260614156|gb|EEX39346.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972]
gi|315178965|gb|ADT85879.1| 30S ribosomal protein S3 [Vibrio furnissii NCTC 11218]
Length = 233
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 2 ATQISKKRKFVA--DGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 59
AT + + F DG F ++ + LT+EL++ S + + + I R V+
Sbjct: 20 ATWFANTKDFADNLDGDF--KVRQFLTKELSKASLSRIVIERPAKSIRVTIHTARPGVVI 77
Query: 60 GEKGRRIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+KG + +L + V K P N E+ +++ + L A + A L +++ A++R
Sbjct: 78 GKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQ-LVADSIASQLERRVMFRRAMKR 136
Query: 118 ACYGVLRFIMESGAKGCEVIVSGKL-RAQRAKSMKFKDGYMVSSGQPVNEY---IDSAVR 173
A +R GAKG +V VSG+L A+ A+S +++G + P++ ID A
Sbjct: 137 AVQNAMRL----GAKGIKVEVSGRLGGAEIARSEWYREGRV-----PLHTLRADIDYATS 187
Query: 174 HVLLRQGVLGIKVKIM 189
GV+G+KV I
Sbjct: 188 SAHTTYGVIGVKVWIF 203
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,413,238,958
Number of Sequences: 23463169
Number of extensions: 135633209
Number of successful extensions: 322863
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 2606
Number of HSP's that attempted gapping in prelim test: 319629
Number of HSP's gapped (non-prelim): 3651
length of query: 236
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 98
effective length of database: 9,121,278,045
effective search space: 893885248410
effective search space used: 893885248410
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)