Your job contains 1 sequence.
>026590
MIISSKTATLTQNSSSMAHLANLNGVSETLPAVPNLPKFQKFPKRAKIIGLLGHKAENFQ
DQAQITRRVSLGLASLALIGSTSTNGVSLAEDNGLWVTGPLPVPPVYNNIANEKTGTRSF
LKKAIYIANIGTKGRIHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVI
SAAAPTDKQPLTDLANRLFESFEKLEVAVSTKNFPQTQSTYADTAVILHEVMDRMA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026590
(236 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2096707 - symbol:PnsL3 "Photosynthetic NDH su... 683 3.1e-67 1
TAIR|locus:2127393 - symbol:PSBQA "photosystem II subunit... 157 4.5e-11 1
TAIR|locus:2115703 - symbol:PSBQ-2 "photosystem II subuni... 156 1.1e-10 1
TAIR|locus:2035775 - symbol:PnsL2 "Photosynthetic NDH su... 137 9.4e-09 1
UNIPROTKB|P83646 - symbol:OsI_025465 "Oxygen-evolving enh... 122 7.3e-06 1
>TAIR|locus:2096707 [details] [associations]
symbol:PnsL3 "Photosynthetic NDH subcomplex L 3"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;TAS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0019684
"photosynthesis, light reaction" evidence=TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009767 "photosynthetic
electron transport chain" evidence=IMP] [GO:0045156 "electron
transporter, transferring electrons within the cyclic electron
transport pathway of photosynthesis activity" evidence=IMP]
[GO:0009344 "nitrite reductase complex [NAD(P)H]" evidence=IMP]
[GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0019252
"starch biosynthetic process" evidence=RCA] [GO:0043085 "positive
regulation of catalytic activity" evidence=RCA] InterPro:IPR008797
Pfam:PF05757 EMBL:CP002686 GO:GO:0019898 GO:GO:0005509
GO:GO:0009535 GO:GO:0009767 InterPro:IPR023222 SUPFAM:SSF101112
EMBL:AC010870 GO:GO:0045156 GO:GO:0009344 GO:GO:0009654 KO:K08901
EMBL:AY070745 EMBL:AY093737 EMBL:AY085184 IPI:IPI00520793
RefSeq:NP_566137.1 UniGene:At.28336 ProteinModelPortal:Q9SGH4
SMR:Q9SGH4 IntAct:Q9SGH4 STRING:Q9SGH4 PRIDE:Q9SGH4
EnsemblPlants:AT3G01440.1 GeneID:821143 KEGG:ath:AT3G01440
TAIR:At3g01440 eggNOG:NOG287651 HOGENOM:HOG000242094
InParanoid:Q9SGH4 OMA:FMYYDFD PhylomeDB:Q9SGH4 ProtClustDB:PLN02729
Genevestigator:Q9SGH4 Uniprot:Q9SGH4
Length = 220
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 133/223 (59%), Positives = 165/223 (73%)
Query: 17 MAHLANLNGVSETLPAVPNLPKFQKFPKRAKIIGLLGHKAENFQ--DQAQITRRVXXXXX 74
MAH +LN ++ TLP++P LP+ +K K + G + E FQ D QITRR+
Sbjct: 1 MAHFIDLNSLTNTLPSLPKLPESRKTGKSS---GFACRRTEEFQEPDSVQITRRMTLGFA 57
Query: 75 XXXXXXXXXX-NGVSLAEDNGLWVTGPLPVPPVYNNIANEKTGTRSFLKKAIYIANIGTK 133
N VSLA+DNG W+ GPLP+PP+YNNI NEKTGTR+F+KK +Y+A+IGTK
Sbjct: 58 VSIGLTGILGENNVSLAQDNGFWIDGPLPIPPIYNNIVNEKTGTRTFIKKGVYVADIGTK 117
Query: 134 GRIHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVISAAAPTDKQPLTD 193
GR++R+K+ AFDLLAM DLIGPDTLNYV+KYLRLKSTF++YDFDN+ISAAA DKQPLTD
Sbjct: 118 GRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISAAASEDKQPLTD 177
Query: 194 LANRLFESFEKLEVAVSTKNFPQTQSTYADTAVILHEVMDRMA 236
LANRLF++FEKLE A TKN +T+S Y DT +L EVM RMA
Sbjct: 178 LANRLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220
>TAIR|locus:2127393 [details] [associations]
symbol:PSBQA "photosystem II subunit QA" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0009637 "response to blue light" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0009657 "plastid organization" evidence=RCA] [GO:0009744
"response to sucrose stimulus" evidence=RCA] [GO:0010114 "response
to red light" evidence=RCA] [GO:0010155 "regulation of proton
transport" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
[GO:0019684 "photosynthesis, light reaction" evidence=RCA]
[GO:0035304 "regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR008797 Pfam:PF05757 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161554 GO:GO:0019898 GO:GO:0005509
EMBL:AL021960 GO:GO:0009535 GO:GO:0031977 GO:GO:0015979
EMBL:AL031187 InterPro:IPR023222 SUPFAM:SSF101112 GO:GO:0009654
KO:K08901 EMBL:Y16847 EMBL:AY050328 EMBL:AY094048 EMBL:AY088330
IPI:IPI00532582 IPI:IPI00657124 PIR:T04959 RefSeq:NP_001031687.1
RefSeq:NP_193860.1 UniGene:At.24610 ProteinModelPortal:Q9XFT3
SMR:Q9XFT3 STRING:Q9XFT3 SWISS-2DPAGE:Q9XFT3 PaxDb:Q9XFT3
PRIDE:Q9XFT3 ProMEX:Q9XFT3 EnsemblPlants:AT4G21280.2 GeneID:827877
KEGG:ath:AT4G21280 TAIR:At4g21280 eggNOG:NOG313473
HOGENOM:HOG000029167 InParanoid:Q9XFT3 OMA:DRFYLQP PhylomeDB:Q9XFT3
ProtClustDB:CLSN2685363 BioCyc:MetaCyc:AT4G21280-MONOMER
Genevestigator:Q9XFT3 Uniprot:Q9XFT3
Length = 224
Score = 157 (60.3 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 99 GPLPVP----PVYNNIANEKTGTRSFLKKAIYIANIGTKGRIHRLKRYAFDLLAMADLIG 154
GP P P P + +++ LK Y+ + R K A D++ + LI
Sbjct: 83 GPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLID 142
Query: 155 PDTLNYVRKYLRLKSTFMYYDFDNVISAAAPTDKQPLTDLANRLFESFEKLEVAVSTKNF 214
YV+ LR K++++ YD + +IS+ +K+ L DL +LF++ + L+ A K+
Sbjct: 143 RKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSP 202
Query: 215 PQTQSTYADTAVILHEVMDRM 235
Q + YA+T L+EV+ ++
Sbjct: 203 SQAEKYYAETVSALNEVLAKL 223
>TAIR|locus:2115703 [details] [associations]
symbol:PSBQ-2 "photosystem II subunit Q-2" species:3702
"Arabidopsis thaliana" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA;ISS] [GO:0015979 "photosynthesis"
evidence=IEA;RCA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=IDA] [GO:0031977 "thylakoid
lumen" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0048046 "apoplast" evidence=IDA] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0070838
"divalent metal ion transport" evidence=RCA] InterPro:IPR008797
Pfam:PF05757 GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0019898 GO:GO:0048046 GO:GO:0005509 EMBL:AL161503
GO:GO:0009535 GO:GO:0031977 GO:GO:0015979 InterPro:IPR023222
SUPFAM:SSF101112 GO:GO:0009654 KO:K08901 eggNOG:NOG313473
HOGENOM:HOG000029167 ProtClustDB:CLSN2685363 EMBL:AF372897
EMBL:BT000648 EMBL:AY088008 EMBL:Z17777 IPI:IPI00548616 PIR:B85065
RefSeq:NP_192427.1 UniGene:At.21853 ProteinModelPortal:Q41932
SMR:Q41932 IntAct:Q41932 STRING:Q41932 PaxDb:Q41932 PRIDE:Q41932
ProMEX:Q41932 EnsemblPlants:AT4G05180.1 GeneID:825866
KEGG:ath:AT4G05180 TAIR:At4g05180 InParanoid:Q41932 OMA:YAARSKS
PhylomeDB:Q41932 Genevestigator:Q41932 GermOnline:AT4G05180
Uniprot:Q41932
Length = 230
Score = 156 (60.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 43/149 (28%), Positives = 73/149 (48%)
Query: 90 AEDNGLWVTGPLPVPPVYNNIANEKTGTRSF---LKKAIYIANIGTKGRIHRLKRYAFDL 146
AE + V GP P+P + R F LK YI + R K A ++
Sbjct: 82 AEAIPIKVGGP-PLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEI 140
Query: 147 LAMADLIGPDTLNYVRKYLRLKSTFMYYDFDNVISAAAPTDKQPLTDLANRLFESFEKLE 206
+ + I YV+ LRL+++++ YD + VISA +KQ L DL +LF++ + L+
Sbjct: 141 INVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLD 200
Query: 207 VAVSTKNFPQTQSTYADTAVILHEVMDRM 235
A +K+ P + Y++T L+ V+ ++
Sbjct: 201 YAARSKSSPDAEKYYSETVSSLNNVLAKL 229
>TAIR|locus:2035775 [details] [associations]
symbol:PnsL2 "Photosynthetic NDH subcomplex L 2"
species:3702 "Arabidopsis thaliana" [GO:0005509 "calcium ion
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009523 "photosystem II" evidence=IEA] [GO:0009654 "oxygen
evolving complex" evidence=IEA] [GO:0015979 "photosynthesis"
evidence=IEA] [GO:0019898 "extrinsic to membrane" evidence=IEA]
[GO:0030095 "chloroplast photosystem II" evidence=ISS] [GO:0009543
"chloroplast thylakoid lumen" evidence=TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0009767 "photosynthetic
electron transport chain" evidence=IMP] [GO:0045156 "electron
transporter, transferring electrons within the cyclic electron
transport pathway of photosynthesis activity" evidence=IMP]
[GO:0009344 "nitrite reductase complex [NAD(P)H]" evidence=IMP]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR008797 Pfam:PF05757 EMBL:CP002684 GO:GO:0019898
GO:GO:0005509 GO:GO:0009535 EMBL:AC007576 GO:GO:0009767
GO:GO:0009543 UniGene:At.46769 UniGene:At.47475 InterPro:IPR023222
SUPFAM:SSF101112 GO:GO:0045156 GO:GO:0009344 GO:GO:0009654
EMBL:AF083742 EMBL:AF370579 EMBL:AY088325 EMBL:AK229642
IPI:IPI00535075 IPI:IPI00547468 PIR:A86275 RefSeq:NP_563937.1
RefSeq:NP_973820.1 ProteinModelPortal:Q9XI73 SMR:Q9XI73
STRING:Q9XI73 PRIDE:Q9XI73 EnsemblPlants:AT1G14150.1 GeneID:837974
KEGG:ath:AT1G14150 TAIR:At1g14150 eggNOG:NOG253837
HOGENOM:HOG000006297 InParanoid:Q9XI73 KO:K08901 OMA:SWRYVIF
PhylomeDB:Q9XI73 ProtClustDB:PLN02999 Genevestigator:Q9XI73
Uniprot:Q9XI73
Length = 190
Score = 137 (53.3 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 33/127 (25%), Positives = 62/127 (48%)
Query: 110 IANEKTGTRSFLKKAIYIANIGTKGRIHRLKRYAFDLLAMADLIGPDTLNYVRKYLRLKS 169
+A EK GTRSF+K+ ++ + + R+K+ A L M +++ + YV Y+RLK
Sbjct: 64 LAQEKWGTRSFIKEKYFMPGLSPEDAAARIKQTAEGLRDMREMLDHMSWRYVIFYIRLKQ 123
Query: 170 TFMYYDFDNVISAAAPTDKQPLTDLANRLFESFEKLEVAVSTKNFPQTQSTYADTAVILH 229
++ D N ++ + + AN L E+ +L+ V T ++ Y T +
Sbjct: 124 AYLSQDLTNAMNILPESRRNDYVQAANELVENMSELDFYVRTPKVYESYLYYEKTLKSID 183
Query: 230 EVMDRMA 236
V++ +A
Sbjct: 184 NVVEFLA 190
>UNIPROTKB|P83646 [details] [associations]
symbol:OsI_025465 "Oxygen-evolving enhancer protein 3,
chloroplastic" species:39946 "Oryza sativa Indica Group"
[GO:0009536 "plastid" evidence=IC] InterPro:IPR008797 Pfam:PF05757
GO:GO:0009536 GO:GO:0009570 GO:GO:0019898 GO:GO:0048046
GO:GO:0005509 GO:GO:0009535 GO:GO:0015979 EMBL:CM000132
GO:GO:0009543 InterPro:IPR023222 SUPFAM:SSF101112 GO:GO:0009654
eggNOG:NOG313473 HOGENOM:HOG000029167 ProteinModelPortal:P83646
SMR:P83646 STRING:P83646 PRIDE:P83646 KEGG:dosa:Os07t0544800-01
Gramene:P83646 Uniprot:P83646
Length = 217
Score = 122 (48.0 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 37/141 (26%), Positives = 68/141 (48%)
Query: 99 GPLPVP----PVYNNIANEKTGTRSFLKKAIYIANIGTKGRIHRLKRYAFDLLAMADLIG 154
GP P P P N +++ T L++ Y+ + R K A D++ + LI
Sbjct: 77 GPPPPPSGGLPGTLN-SDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIE 135
Query: 155 PDTLNYVRKYLRLKSTFMYYDFDNVISAAAPTDKQPLTDLANRLFESFEKLEVAVSTKNF 214
+VR LRL+++++ YD VI++ +K+ L DL +LF + + L+ A K+
Sbjct: 136 KKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSP 195
Query: 215 PQTQSTYADTAVILHEVMDRM 235
+ + Y T L +V+ ++
Sbjct: 196 EEAEKYYTLTKSALGDVLAKL 216
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.376 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 236 221 0.00095 112 3 11 22 0.38 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 564 (60 KB)
Total size of DFA: 147 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.18u 0.19s 17.37t Elapsed: 00:00:01
Total cpu time: 17.18u 0.19s 17.37t Elapsed: 00:00:01
Start: Fri May 10 21:04:21 2013 End: Fri May 10 21:04:22 2013