Query 026595
Match_columns 236
No_of_seqs 104 out of 1265
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 10:03:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026595.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026595hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03145 Protein phosphatase 2 100.0 4.4E-46 9.4E-51 313.0 26.9 231 1-236 79-331 (365)
2 COG0631 PTC1 Serine/threonine 100.0 3.7E-44 8.1E-49 290.7 23.3 223 1-236 23-253 (262)
3 PTZ00224 protein phosphatase 2 100.0 6.9E-42 1.5E-46 288.5 27.2 219 1-235 36-271 (381)
4 KOG0698 Serine/threonine prote 100.0 1.9E-41 4.1E-46 283.5 27.0 235 1-236 54-305 (330)
5 PF00481 PP2C: Protein phospha 100.0 4E-42 8.6E-47 279.2 13.8 223 1-227 14-254 (254)
6 KOG0697 Protein phosphatase 1B 100.0 1.9E-40 4E-45 258.6 19.6 231 1-236 36-292 (379)
7 cd00143 PP2Cc Serine/threonine 100.0 9.2E-39 2E-43 259.0 25.9 228 1-234 15-254 (254)
8 smart00332 PP2Cc Serine/threon 100.0 2E-38 4.4E-43 257.4 25.9 225 1-232 20-255 (255)
9 PRK14559 putative protein seri 100.0 6.9E-38 1.5E-42 277.8 24.8 224 1-235 390-635 (645)
10 KOG0699 Serine/threonine prote 100.0 9.8E-31 2.1E-35 211.1 19.2 154 78-235 329-503 (542)
11 KOG0700 Protein phosphatase 2C 100.0 2E-29 4.3E-34 207.4 17.1 208 14-221 96-377 (390)
12 KOG1379 Serine/threonine prote 100.0 1.9E-27 4.1E-32 189.8 21.2 202 2-234 92-330 (330)
13 KOG1323 Serine/threonine phosp 99.9 3.3E-23 7.1E-28 166.2 17.1 226 10-236 137-488 (493)
14 KOG0618 Serine/threonine phosp 99.9 1.1E-20 2.4E-25 169.2 16.0 216 14-236 548-773 (1081)
15 smart00331 PP2C_SIG Sigma fact 99.9 4E-19 8.7E-24 138.5 21.7 160 15-219 28-192 (193)
16 PF13672 PP2C_2: Protein phosp 99.9 1E-20 2.2E-25 149.6 12.5 168 2-203 13-193 (212)
17 TIGR02865 spore_II_E stage II 99.8 5.9E-17 1.3E-21 148.8 23.0 174 15-234 578-763 (764)
18 PF07228 SpoIIE: Stage II spor 99.7 3E-15 6.6E-20 116.5 22.2 176 15-235 2-193 (193)
19 COG2208 RsbU Serine phosphatas 99.1 7.3E-08 1.6E-12 82.5 21.8 175 16-236 174-367 (367)
20 PF09436 DUF2016: Domain of un 67.6 3.4 7.5E-05 26.4 1.3 22 176-197 25-46 (72)
21 COG2168 DsrH Uncharacterized c 61.4 6.5 0.00014 26.7 1.8 27 177-203 24-50 (96)
22 PRK10693 response regulator of 54.2 1.3E+02 0.0027 25.0 11.3 93 15-111 161-259 (303)
23 COG3700 AphA Acid phosphatase 48.7 41 0.00089 25.9 4.5 45 178-222 71-130 (237)
24 PF06972 DUF1296: Protein of u 40.7 51 0.0011 20.2 3.2 25 192-216 19-44 (60)
25 PF01436 NHL: NHL repeat; Int 35.7 62 0.0013 16.1 3.8 20 87-106 9-28 (28)
26 PRK10795 penicillin-binding pr 30.6 1.4E+02 0.0029 27.9 5.9 42 3-44 572-613 (634)
27 PF04077 DsrH: DsrH like prote 27.0 12 0.00027 24.9 -1.1 26 177-202 18-43 (88)
28 PRK13845 putative glycerol-3-p 26.8 2.9E+02 0.0062 24.5 6.7 26 19-44 323-351 (437)
29 COG0416 PlsX Fatty acid/phosph 26.4 2E+02 0.0044 24.5 5.6 27 19-45 224-253 (338)
30 TIGR03735 PRTRC_A PRTRC system 26.1 40 0.00086 26.2 1.3 46 176-221 24-90 (192)
31 PF14014 DUF4230: Protein of u 25.8 2.7E+02 0.0058 20.3 6.7 40 164-203 75-114 (157)
32 cd08788 CARD_NOD2_2_CARD15 Cas 24.9 94 0.002 20.4 2.7 31 192-222 29-59 (81)
33 TIGR00182 plsX fatty acid/phos 24.2 3.4E+02 0.0073 23.0 6.7 26 19-44 211-239 (322)
34 cd08325 CARD_CASP1-like Caspas 24.0 2E+02 0.0044 18.8 4.3 32 191-222 30-61 (83)
35 TIGR02276 beta_rpt_yvtn 40-res 23.3 1.3E+02 0.0029 15.9 3.5 20 90-109 3-22 (42)
36 PLN03148 Blue copper-like prot 22.7 2E+02 0.0043 21.8 4.5 17 171-187 89-105 (167)
37 PRK05331 putative phosphate ac 22.3 3.2E+02 0.0069 23.2 6.2 25 20-44 225-252 (334)
38 PRK02391 heat shock protein Ht 22.1 86 0.0019 26.1 2.7 37 166-203 103-139 (296)
39 PRK03982 heat shock protein Ht 21.8 1.1E+02 0.0024 25.2 3.4 37 166-203 95-131 (288)
40 PF11813 DUF3334: Protein of u 21.4 47 0.001 26.0 0.9 16 14-29 47-63 (229)
41 PRK05457 heat shock protein Ht 20.8 1.3E+02 0.0029 24.8 3.6 37 166-203 104-140 (284)
42 COG5233 GRH1 Peripheral Golgi 20.1 2.3E+02 0.005 24.0 4.7 28 176-203 207-234 (417)
No 1
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=4.4e-46 Score=312.96 Aligned_cols=231 Identities=36% Similarity=0.582 Sum_probs=195.1
Q ss_pred CCCceEeeeeec--------CCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHHHHHHhcc
Q 026595 1 MEDYHVAKFVQL--------QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHS 72 (236)
Q Consensus 1 ~eD~~~~~~~~~--------~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~ 72 (236)
|||++++..... ...+..||+|||||||+.+|.++++.+.+.+.+.......+...|.++|..++..+....
T Consensus 79 nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~~~~~~~~al~~af~~~d~~~~~~~ 158 (365)
T PLN03145 79 MEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDEDFPREIEKVVSSAFLQTDTAFAEAC 158 (365)
T ss_pred CCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhccchhHHHHHHHHHHHHhHHHHhhh
Confidence 899998744321 123468999999999999999999999999987655555677889999999999987654
Q ss_pred CCC-CCCCcceEEEEEEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCcee
Q 026595 73 SDL-GRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLA 149 (236)
Q Consensus 73 ~~~-~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (236)
... ...+|||++++++.+++++++|+||||+|++|+++..+||+||++. .|+.|+.+.||.+.. .+.++.+.
T Consensus 159 ~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~-----g~v~g~l~ 233 (365)
T PLN03145 159 SLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYD-----GYLNGQLN 233 (365)
T ss_pred ccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCceec-----ceECCccc
Confidence 322 3458999999999999999999999999999999999999999998 788899999998863 35667778
Q ss_pred ccccccccCCCC-------CcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHH----ccCCHHHHHHHHHHHH
Q 026595 150 VSRAFGDKSLKS-------HLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIAR----KFKDPQKAAKQLTAEA 218 (236)
Q Consensus 150 ~tr~lG~~~~~~-------~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~----~~~~~~~~a~~l~~~a 218 (236)
+||+||+..++. .+.++|++..+.+..++.+|||||||||+.++++++.++++ ...+|+++|+.|++.|
T Consensus 234 vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l~~~~~p~~aa~~Lv~~A 313 (365)
T PLN03145 234 VARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPVMCSKELVDEA 313 (365)
T ss_pred cccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 999999876642 36789999999999756677899999999999999866654 3468999999999999
Q ss_pred HHCCCCCCcEEEEEEeCC
Q 026595 219 LKRDSKDDISCVVVRFRG 236 (236)
Q Consensus 219 ~~~~~~Dn~Tvi~v~~~~ 236 (236)
+++++.||+|||||+|+.
T Consensus 314 l~rgs~DNITvIVV~l~~ 331 (365)
T PLN03145 314 LKRKSGDNLAVVVVCFQS 331 (365)
T ss_pred HhCCCCCCEEEEEEEeec
Confidence 999999999999999863
No 2
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-44 Score=290.73 Aligned_cols=223 Identities=35% Similarity=0.476 Sum_probs=187.9
Q ss_pred CCCceEeeeeecCCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccC---C-cC--HHHHHHHHHHHHHHHHHhccC-
Q 026595 1 MEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF---W-VD--PQRSISKAYEKTDQAILSHSS- 73 (236)
Q Consensus 1 ~eD~~~~~~~~~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~---~-~~--~~~~l~~~~~~~~~~l~~~~~- 73 (236)
+||++.+........ ..+++||||||||++++.+++.+++.+.+.... . .. ..+.+.+.+..++..+.....
T Consensus 23 NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~n~~i~~~~~~ 101 (262)
T COG0631 23 NEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAILKANEAIAEEGQL 101 (262)
T ss_pred CCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHhhhc
Confidence 699998876444444 789999999999999999999988888655111 1 11 568999999999999988864
Q ss_pred -CCCCCCcceEEEEEEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCchhhhHHHhcCCeEecCCCCCCcccCceeccc
Q 026595 74 -DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSR 152 (236)
Q Consensus 74 -~~~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr 152 (236)
....+||||++++++.++++++|||||||+|++|++.++++|.||++. .+....+.........+|+++ .+||
T Consensus 102 ~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~---~~~~~~~~~~~~~~~~~~~~~---~ltr 175 (262)
T COG0631 102 NEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLV---NRLEQRGIITPEEARSHPRRN---ALTR 175 (262)
T ss_pred ccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHH---HHHHHhcCCCHHHHHhCccch---hhhh
Confidence 335789999999999999999999999999999999999999999765 223333333333344445555 9999
Q ss_pred cccccCCCCCcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHCCCCCCcEEEEE
Q 026595 153 AFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVV 232 (236)
Q Consensus 153 ~lG~~~~~~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~Dn~Tvi~v 232 (236)
++|+.. .+.|++....+.+ +|+|||||||||+.++++++.++++...+++++++.|++.|+.+++.||+|+++|
T Consensus 176 alG~~~-----~~~p~~~~~~~~~-~d~llL~SDGl~d~v~~~~i~~il~~~~~~~~~~~~li~~a~~~g~~DNiT~ilv 249 (262)
T COG0631 176 ALGDFD-----LLEPDITELELEP-GDFLLLCSDGLWDVVSDDEIVDILKNSETPQEAADKLIELALEGGGPDNITVVLV 249 (262)
T ss_pred hcCCCc-----ccceeEEEEEcCC-CCEEEEECCCCccCcCHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCCceEEEEE
Confidence 999988 5899999999998 7999999999999999999999999888999999999999999999999999999
Q ss_pred EeCC
Q 026595 233 RFRG 236 (236)
Q Consensus 233 ~~~~ 236 (236)
++.+
T Consensus 250 ~~~~ 253 (262)
T COG0631 250 RLNG 253 (262)
T ss_pred Eeec
Confidence 9763
No 3
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=6.9e-42 Score=288.46 Aligned_cols=219 Identities=35% Similarity=0.578 Sum_probs=180.5
Q ss_pred CCCceEeeeeecCCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHHHHHHhccCCCCCCCc
Q 026595 1 MEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGS 80 (236)
Q Consensus 1 ~eD~~~~~~~~~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~ 80 (236)
|||++++.. +++..+|+|||||||.++|.++++.+...+.+.... .....|++++..+|..+..... . +|
T Consensus 36 nED~~~v~~----~~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~~--~~~~~l~~a~~~~d~~i~~~~~---~-~G 105 (381)
T PTZ00224 36 MEDAHLLYL----TDDWGFFGVFDGHVNDECSQYLARAWPQALEKEPEP--MTDERMEELCLEIDEEWMDSGR---E-GG 105 (381)
T ss_pred CCCeeEecc----CCCceEEEEEeCCCcHHHHHHHHHHHHHHHHhcccc--ccHHHHHHHHHHHHHHHHhccc---C-CC
Confidence 899987532 245679999999999999999999988776543221 1235589999999999986543 2 34
Q ss_pred ceEEEE-EEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCceecccccccc
Q 026595 81 TAVTAI-LINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDK 157 (236)
Q Consensus 81 tt~~~~-~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr~lG~~ 157 (236)
||.+++ +..+.+++++|+||||+|++|++++.+||+||++. .|+.|+...|+.+.. .+.++.+.+||++|+.
T Consensus 106 sTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~-----~Rv~G~l~vTRalGd~ 180 (381)
T PTZ00224 106 STGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVS-----NRVDGDLAVSRAFGDR 180 (381)
T ss_pred CeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEecc-----ccccCceeeecccCCc
Confidence 555544 44568999999999999999999999999999988 688899999988762 3667788999999997
Q ss_pred CCCC---------CcccCcceEEEEeCCCCcEEEEEcCCCCC-CCCHHHHHHHHHc----cCCHHHHHHHHHHHHHHCCC
Q 026595 158 SLKS---------HLRSDPDIQNTILDGRSDVLVLASDGLWK-VMSNQEAVDIARK----FKDPQKAAKQLTAEALKRDS 223 (236)
Q Consensus 158 ~~~~---------~v~~~p~~~~~~l~~~~d~lll~SDGv~~-~l~~~~i~~~~~~----~~~~~~~a~~l~~~a~~~~~ 223 (236)
.+|. .+.++|++..+.+.+ +|+|||||||||+ .++++++.+++.+ ..+++++|+.|++.|+.+++
T Consensus 181 ~~K~~~~~~~~~~~v~~~Pdi~~~~l~~-~D~llLaSDGL~d~~ls~eEi~~iv~~~l~~~~~~~~aA~~Lv~~A~~rGs 259 (381)
T PTZ00224 181 SFKVKGTGDYLEQKVIAVPDVTHLTCQS-NDFIILACDGVFEGNFSNEEVVAFVKEQLETCDDLAVVAGRVCDEAIRRGS 259 (381)
T ss_pred ccccccccccccCcceeeeEEEEEECCC-CCEEEEECCCcCcCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Confidence 6542 355789999999986 9999999999999 7999999999863 46899999999999999999
Q ss_pred CCCcEEEEEEeC
Q 026595 224 KDDISCVVVRFR 235 (236)
Q Consensus 224 ~Dn~Tvi~v~~~ 235 (236)
.||+|||||++.
T Consensus 260 ~DNITvIvV~~~ 271 (381)
T PTZ00224 260 KDNISCLIVQLK 271 (381)
T ss_pred CCCEEEEEEEee
Confidence 999999999986
No 4
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=283.50 Aligned_cols=235 Identities=49% Similarity=0.753 Sum_probs=207.0
Q ss_pred CCCceEeeee----ecCCC-ceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCcC---HHHHHHHHHH-HHHHHHHhc
Q 026595 1 MEDYHVAKFV----QLQGH-ELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVD---PQRSISKAYE-KTDQAILSH 71 (236)
Q Consensus 1 ~eD~~~~~~~----~~~~~-~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~-~~~~~l~~~ 71 (236)
|||++.+... ...+. +..+|+|||||||..+|.++.+.+...+.+....+.. ....++++|. ..+..+..+
T Consensus 54 med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~F~~~~D~~~~~~ 133 (330)
T KOG0698|consen 54 MEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRAFLTKTDSEFLEK 133 (330)
T ss_pred cCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 8999877554 23344 6899999999999999999999999999988777774 6789999999 599999876
Q ss_pred cCCCCCCCcceEEEEEEeCCEEEEEecCcceEEEEeCC-ceeeCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCce
Q 026595 72 SSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAG-VAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQL 148 (236)
Q Consensus 72 ~~~~~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~-~~~~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~~ 148 (236)
.......|+|++++++.++.++++||+||||+.+.+.+ +..+||.||.+. .|+.|+...||++..... .+|.++.+
T Consensus 134 ~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~-~~Rv~G~L 212 (330)
T KOG0698|consen 134 REDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGG-VWRVNGVL 212 (330)
T ss_pred ccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCC-cceEeceE
Confidence 33334567777777777677999999999999999866 899999999997 999999999999996655 57999999
Q ss_pred eccccccccCCC-CCcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc----cCCHHHHHHHHHHHHHHCCC
Q 026595 149 AVSRAFGDKSLK-SHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK----FKDPQKAAKQLTAEALKRDS 223 (236)
Q Consensus 149 ~~tr~lG~~~~~-~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~----~~~~~~~a~~l~~~a~~~~~ 223 (236)
.++|+||+..+| +.+.++|++....+..+++||||+||||||.+++++..++++. ...+..+++.+.+.+..+++
T Consensus 213 avsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~~~~~~~~~a~~~l~~~a~~~~s 292 (330)
T KOG0698|consen 213 AVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDELASISSPLAAAKLLATEALSRGS 292 (330)
T ss_pred EEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHhhccccHHHHHHHHHHHHhhcCC
Confidence 999999999999 7799999999999998788999999999999999999999988 56899999999999999999
Q ss_pred CCCcEEEEEEeCC
Q 026595 224 KDDISCVVVRFRG 236 (236)
Q Consensus 224 ~Dn~Tvi~v~~~~ 236 (236)
.||+|||+|.|.+
T Consensus 293 ~DnitvvvV~l~~ 305 (330)
T KOG0698|consen 293 KDNITVVVVRLKS 305 (330)
T ss_pred CCCeEEEEEEecC
Confidence 9999999999864
No 5
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=4e-42 Score=279.21 Aligned_cols=223 Identities=43% Similarity=0.632 Sum_probs=183.8
Q ss_pred CCCceEeeeeec---CCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCc--CHHHHHHHHHHH-HHHHHHhccCC
Q 026595 1 MEDYHVAKFVQL---QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWV--DPQRSISKAYEK-TDQAILSHSSD 74 (236)
Q Consensus 1 ~eD~~~~~~~~~---~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~-~~~~l~~~~~~ 74 (236)
|||++++..... ...+..+|+|||||||.+++.+++..+...+.+...... .+...|..+|.. .+..+......
T Consensus 14 ~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~~al~~a~~~~~~~~~~~~~~~ 93 (254)
T PF00481_consen 14 MEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFNDGNDIEEALRQAFLAFTDESLYSDSEN 93 (254)
T ss_dssp HHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhcccccccchhhcccceeeecccccccccccc
Confidence 799998877653 467899999999999999999999999977766544333 477889999999 77777763221
Q ss_pred -CCCCCcceEEEEEEeCCEEEEEecCcceEEEEeCCcee-eCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCceec
Q 026595 75 -LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAV-QMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAV 150 (236)
Q Consensus 75 -~~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~-~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (236)
....+|||++++++.++++++||+||||+|+++++... +||+||++. .|+.|+...||.+.. ..+.++.+.+
T Consensus 94 ~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~----~~rv~g~l~~ 169 (254)
T PF00481_consen 94 NESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE----NGRVNGVLAV 169 (254)
T ss_dssp HTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE----TEEETTTBSS
T ss_pred cccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc----chhhhhcccc
Confidence 33578999999999999999999999999999999888 999999999 899999999999885 4577788899
Q ss_pred cccccccCCCC----CcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHccCC----HHHHHHHHHHHHHHCC
Q 026595 151 SRAFGDKSLKS----HLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKD----PQKAAKQLTAEALKRD 222 (236)
Q Consensus 151 tr~lG~~~~~~----~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~~~~----~~~~a~~l~~~a~~~~ 222 (236)
||+||+..+++ .|.++|++..+.+.+.+.+|||||||||+.++++++.+++++..+ |+.+|+.|++.|++++
T Consensus 170 sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~~~~~~~~~a~~L~~~A~~~g 249 (254)
T PF00481_consen 170 SRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLNSGRSPQEAAEKLVDEAIARG 249 (254)
T ss_dssp SB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHTT
T ss_pred ccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHhcC
Confidence 99999999998 699999999999998545999999999999999999999987544 9999999999999999
Q ss_pred CCCCc
Q 026595 223 SKDDI 227 (236)
Q Consensus 223 ~~Dn~ 227 (236)
+.||+
T Consensus 250 s~DNi 254 (254)
T PF00481_consen 250 SKDNI 254 (254)
T ss_dssp HHSHE
T ss_pred CCCCC
Confidence 99996
No 6
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=258.58 Aligned_cols=231 Identities=32% Similarity=0.532 Sum_probs=202.8
Q ss_pred CCCceEeeeee-cCCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCc--------CHHHHHHHHHHHHHHHHHhc
Q 026595 1 MEDYHVAKFVQ-LQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWV--------DPQRSISKAYEKTDQAILSH 71 (236)
Q Consensus 1 ~eD~~~~~~~~-~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~~~~~~~l~~~ 71 (236)
|||+|...... -.-+++.||+|+|||.|++.|.+++..+.+.+...+++.. +....++..|.++++.+...
T Consensus 36 MEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~~~~~GIrtGFL~iDE~mr~~ 115 (379)
T KOG0697|consen 36 MEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVENVEKGIRTGFLSIDEIMRTL 115 (379)
T ss_pred hhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHHHHHhhHhhcceeHHHHHhhh
Confidence 89999553322 3348999999999999999999999999999987755543 56678888898888777655
Q ss_pred cCCC--CCCCcceEEEEEEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCc
Q 026595 72 SSDL--GRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQ 147 (236)
Q Consensus 72 ~~~~--~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~ 147 (236)
+... ...+|||.+++++...++|++|+||||+.+.|+++...-|+||.+. .|+.||+..||-+-. .|.||.
T Consensus 116 ~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMI-----qRvNGs 190 (379)
T KOG0697|consen 116 SDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMI-----QRVNGS 190 (379)
T ss_pred hhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHHHHhcCCCeEEE-----EEecce
Confidence 4333 2348899999999999999999999999999999999999999988 999999999998773 489999
Q ss_pred eeccccccccCCC---------CCcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc----cCCHHHHHHHH
Q 026595 148 LAVSRAFGDKSLK---------SHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK----FKDPQKAAKQL 214 (236)
Q Consensus 148 ~~~tr~lG~~~~~---------~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~----~~~~~~~a~~l 214 (236)
+.++|++|+..|| +.|+|+|+++.+....+++|+||++||+||.++++|+.++++. ..+..++|..+
T Consensus 191 LAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelcefv~sRl~Vt~dL~~vcn~V 270 (379)
T KOG0697|consen 191 LAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTSDLEEVCNDV 270 (379)
T ss_pred eeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHHHHHhhheecccHHHHHHHH
Confidence 9999999999998 4599999999999998899999999999999999999999976 47899999999
Q ss_pred HHHHHHCCCCCCcEEEEEEeCC
Q 026595 215 TAEALKRDSKDDISCVVVRFRG 236 (236)
Q Consensus 215 ~~~a~~~~~~Dn~Tvi~v~~~~ 236 (236)
++.++-+|+.||+|+|+|-|.|
T Consensus 271 vDtCLhKGSRDNMsivlvcfp~ 292 (379)
T KOG0697|consen 271 VDTCLHKGSRDNMSIVLVCFPG 292 (379)
T ss_pred HHHHHhccCccCceEEEEecCC
Confidence 9999999999999999998865
No 7
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=9.2e-39 Score=259.00 Aligned_cols=228 Identities=46% Similarity=0.634 Sum_probs=193.7
Q ss_pred CCCceEeeeeecCCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccC-----CcCHHHHHHHHHHHHHHHHHhccCC-
Q 026595 1 MEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF-----WVDPQRSISKAYEKTDQAILSHSSD- 74 (236)
Q Consensus 1 ~eD~~~~~~~~~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~l~~~~~~- 74 (236)
+||++++...... .+..+|+|||||||+..+..+++.+++.+.+.... ...+...++.+|..+++.+......
T Consensus 15 neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 93 (254)
T cd00143 15 NEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLRADEEILEEAQDE 93 (254)
T ss_pred CcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 5899887543211 36799999999999999999999998888765332 2356678999999999999887643
Q ss_pred -CCCCCcceEEEEEEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCceecc
Q 026595 75 -LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVS 151 (236)
Q Consensus 75 -~~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~~~~t 151 (236)
....++||++++++..++++++|+||||+|++|++++.++|.||++. .+..++...++... ..+.++.+.+|
T Consensus 94 ~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~t 168 (254)
T cd00143 94 PDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVS-----NGRVPGVLAVT 168 (254)
T ss_pred cCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEE-----eCEEcCceeec
Confidence 34678999999999999999999999999999999999999999988 67788888877654 12455667999
Q ss_pred ccccccCCCCCcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHccC---CHHHHHHHHHHHHHHCCCCCCcE
Q 026595 152 RAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFK---DPQKAAKQLTAEALKRDSKDDIS 228 (236)
Q Consensus 152 r~lG~~~~~~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~~~---~~~~~a~~l~~~a~~~~~~Dn~T 228 (236)
+++|...+++.+.++|++..+.+.+++|+|+|||||||+++++++|.+++.... +++++|+.|++.+.+++..||+|
T Consensus 169 ~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~~~~~~~~~a~~l~~~a~~~~~~Dn~t 248 (254)
T cd00143 169 RALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSELAKEDLQEAAQELVDLALRRGSHDNIT 248 (254)
T ss_pred cccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHhcccCHHHHHHHHHHHHHhCCCCCCEE
Confidence 999999877666889999999994459999999999999999999999998876 89999999999999999999999
Q ss_pred EEEEEe
Q 026595 229 CVVVRF 234 (236)
Q Consensus 229 vi~v~~ 234 (236)
+|++++
T Consensus 249 ~i~~~~ 254 (254)
T cd00143 249 VVVVRL 254 (254)
T ss_pred EEEEeC
Confidence 999975
No 8
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=2e-38 Score=257.38 Aligned_cols=225 Identities=47% Similarity=0.686 Sum_probs=195.1
Q ss_pred CCCceEeeeeecCCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCc----CHHHHHHHHHHHHHHHHHhccCCC-
Q 026595 1 MEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWV----DPQRSISKAYEKTDQAILSHSSDL- 75 (236)
Q Consensus 1 ~eD~~~~~~~~~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~l~~~~~~~- 75 (236)
.||++++.... ..+..+++|||||||..+|.++++.+.+.+.+...... .+...|++++..++..+.......
T Consensus 20 neD~~~~~~~~--~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 97 (255)
T smart00332 20 MEDAHVITPDL--SDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDEEILEELESLE 97 (255)
T ss_pred CcceEEEeccC--CCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 58988875432 26788999999999999999999999998887654443 477889999999999998876554
Q ss_pred -CCCCcceEEEEEEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCceeccc
Q 026595 76 -GRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSR 152 (236)
Q Consensus 76 -~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr 152 (236)
...++||++++++..++++++|+||||+|++|++++.++|+||++. .+..++...++.+... +.++.+.+||
T Consensus 98 ~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~lt~ 172 (255)
T smart00332 98 EDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVING-----RVNGVLALSR 172 (255)
T ss_pred CCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECC-----eECCeEeccc
Confidence 3578999999999999999999999999999999999999999997 7788888888876632 4455679999
Q ss_pred cccccCCCCCcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHccC---CHHHHHHHHHHHHHHCCCCCCcEE
Q 026595 153 AFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFK---DPQKAAKQLTAEALKRDSKDDISC 229 (236)
Q Consensus 153 ~lG~~~~~~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~~~---~~~~~a~~l~~~a~~~~~~Dn~Tv 229 (236)
++|...+++.+.++|++....+.+++|+|+|||||||++++++++.+++.... ++.++++.|.+.|..++..||+|+
T Consensus 173 ~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~Dn~T~ 252 (255)
T smart00332 173 AIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSKSDPEEAAKRLIDLALARGSKDNITV 252 (255)
T ss_pred ccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHcCCCCCeEE
Confidence 99999888888899999999974459999999999999999999999998765 599999999999999999999999
Q ss_pred EEE
Q 026595 230 VVV 232 (236)
Q Consensus 230 i~v 232 (236)
|++
T Consensus 253 ivv 255 (255)
T smart00332 253 IVV 255 (255)
T ss_pred EEC
Confidence 985
No 9
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=6.9e-38 Score=277.83 Aligned_cols=224 Identities=21% Similarity=0.267 Sum_probs=168.2
Q ss_pred CCCceEeeeeec-----CC---CceEEEEEEeCCCCchHHHHHHHHHHHHHHhc----ccCCcCHHHHHHHHHHHHHHHH
Q 026595 1 MEDYHVAKFVQL-----QG---HELGLFAIYDGHLGETVPAYLQKHLFSNILKE----EEFWVDPQRSISKAYEKTDQAI 68 (236)
Q Consensus 1 ~eD~~~~~~~~~-----~~---~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~l 68 (236)
|||++.+..... .+ .+..+|+|||||||+.+++.|++.+++.+.+. ........+.+++++..+|..+
T Consensus 390 NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~~L~~ai~~AN~~I 469 (645)
T PRK14559 390 NEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEETIREAIYLANEAI 469 (645)
T ss_pred cCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHH
Confidence 699886643210 01 23578999999999987777766666665431 1111123567999999999999
Q ss_pred HhccCC----CCCCCcceEEEEEEeCCEEEEEecCcceEEEE-eCCceeeCCCCCCCchhhhHHHhcCCeEecCCCCCCc
Q 026595 69 LSHSSD----LGRGGSTAVTAILINGQRLWVANVGDSRAVLS-TAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPR 143 (236)
Q Consensus 69 ~~~~~~----~~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~-r~~~~~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~ 143 (236)
.+.... ....||||++++++.+++++++||||||+|++ |++++.++|+||++. .++...| ........
T Consensus 470 ~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~---~~lv~~G-i~~~~a~~--- 542 (645)
T PRK14559 470 YDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVG---QREIQRG-VEPQIAYA--- 542 (645)
T ss_pred HHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHH---HHHHHhC-CCHHHHhc---
Confidence 875432 23569999999999999999999999999998 568999999999765 3333444 22222222
Q ss_pred ccCceeccccccccCCCCCcccCcceEEEEeCCCCcEEEEEcCCCCCC--CCH---HHHHHHHHccCCHHHHHHHHHHHH
Q 026595 144 VNGQLAVSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKV--MSN---QEAVDIARKFKDPQKAAKQLTAEA 218 (236)
Q Consensus 144 ~~~~~~~tr~lG~~~~~~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~--l~~---~~i~~~~~~~~~~~~~a~~l~~~a 218 (236)
+++.+.+||+||+...+ ..+|++..+.+.+ +|+|||||||||++ +.. +++..++....+++++++.|++.|
T Consensus 543 ~p~~~~LTrALG~~~~~---~l~Pdi~~~~L~~-gD~lLLCSDGL~D~~~ve~~~~~~l~~il~~~~~l~~aa~~Li~~A 618 (645)
T PRK14559 543 RPDAYQLTQALGPRDNS---AIQPDIQFLEIEE-DTLLLLCSDGLSDNDLLETHWQTHLLPLLSSSANLDQGLNKLIDLA 618 (645)
T ss_pred CcccceeeeccCCCCCC---cccceEEEEEcCC-CCEEEEECCCCCCCcccchHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 23456999999986532 3589999999987 99999999999994 443 345667777778999999999999
Q ss_pred HHCCCCCCcEEEEEEeC
Q 026595 219 LKRDSKDDISCVVVRFR 235 (236)
Q Consensus 219 ~~~~~~Dn~Tvi~v~~~ 235 (236)
+.+++.||+|+|+|+++
T Consensus 619 l~~gg~DNITvIvV~l~ 635 (645)
T PRK14559 619 NQYNGHDNITAILVRLK 635 (645)
T ss_pred HHcCCCCcEEEEEEEec
Confidence 99999999999999986
No 10
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=9.8e-31 Score=211.13 Aligned_cols=154 Identities=38% Similarity=0.615 Sum_probs=139.5
Q ss_pred CCcceEEEEEEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCc--hhhhHHHhcCCeEecCCCCCCcccCceecccccc
Q 026595 78 GGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN--TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFG 155 (236)
Q Consensus 78 ~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~--~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr~lG 155 (236)
.+|||.+++++.++++++||.||||+.+.|+|+.+-++-||.+. .|..||...||.+.- ..|.|+.++++|+||
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtl----DGRVNGGLNLSRA~G 404 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTL----DGRVNGGLNLSRAFG 404 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEee----cceecCccchhhhhh
Confidence 37899999999999999999999999999999999999999999 899999999999883 358999999999999
Q ss_pred ccCCCC---------CcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc----cCCHHHHHHHHHHHHHHCC
Q 026595 156 DKSLKS---------HLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK----FKDPQKAAKQLTAEALKRD 222 (236)
Q Consensus 156 ~~~~~~---------~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~----~~~~~~~a~~l~~~a~~~~ 222 (236)
+..||. .|.+-|+|....|.++++|+|+++||||+.++.++++++++. +...-.+|+.|++.++.-.
T Consensus 405 DHaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l~~n~~ls~iceeL~D~CLAp~ 484 (542)
T KOG0699|consen 405 DHAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLLAKNSSLSEICEELCDACLAPS 484 (542)
T ss_pred hhhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHHhcCchHHHHHHHHHHhhcCCC
Confidence 999984 478899999999999889999999999999999999888864 5678889999999998743
Q ss_pred ------CCCCcEEEEEEeC
Q 026595 223 ------SKDDISCVVVRFR 235 (236)
Q Consensus 223 ------~~Dn~Tvi~v~~~ 235 (236)
+.||+|+|++.|+
T Consensus 485 T~GDGTGCDNMT~ii~~Fk 503 (542)
T KOG0699|consen 485 TDGDGTGCDNMTVIITTFK 503 (542)
T ss_pred CCCCCcCCCcceEEEEEec
Confidence 5699999999885
No 11
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-29 Score=207.43 Aligned_cols=208 Identities=38% Similarity=0.515 Sum_probs=165.0
Q ss_pred CCceEEEEEEeCCCCchHHHHHHHHHHHHHHhc------------c----------------------cCCcCHHHHHHH
Q 026595 14 GHELGLFAIYDGHLGETVPAYLQKHLFSNILKE------------E----------------------EFWVDPQRSISK 59 (236)
Q Consensus 14 ~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~------------~----------------------~~~~~~~~~l~~ 59 (236)
++++.|+||+|||||.++++++++.+..++..+ . .......+.|.+
T Consensus 96 ~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~ 175 (390)
T KOG0700|consen 96 ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSK 175 (390)
T ss_pred cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHH
Confidence 588999999999999999999999998887621 1 002445688999
Q ss_pred HHHHHHHHHHhccCCC------CCCCcceEEEEEEeCCEEEEEecCcceEEEE---eCC---ceeeCCCCCCCc--hhhh
Q 026595 60 AYEKTDQAILSHSSDL------GRGGSTAVTAILINGQRLWVANVGDSRAVLS---TAG---VAVQMTTDHEPN--TERG 125 (236)
Q Consensus 60 ~~~~~~~~l~~~~~~~------~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~---r~~---~~~~lt~dh~~~--~e~~ 125 (236)
+|.+..+.+....+.. ...+|+++++.++.++.+|+||+||||+.+- +++ ...|||.||+.. +|+.
T Consensus 176 Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~ 255 (390)
T KOG0700|consen 176 AFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVR 255 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHH
Confidence 9999988886543222 3567788888899999999999999999984 333 468999999988 8888
Q ss_pred HHHhcCC-eEecCCCCCCcccCceeccccccccCCC---------------------CCcccCcceEEEEeCCCCcEEEE
Q 026595 126 SIEDKGG-FVSNMPGDVPRVNGQLAVSRAFGDKSLK---------------------SHLRSDPDIQNTILDGRSDVLVL 183 (236)
Q Consensus 126 ~~~~~g~-~~~~~~~~~~~~~~~~~~tr~lG~~~~~---------------------~~v~~~p~~~~~~l~~~~d~lll 183 (236)
|++...- -....-..+.|..|.+++|||+|+..+| |.++++|.++...|.+.+.|+||
T Consensus 256 Rir~eHPdd~~~vv~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIl 335 (390)
T KOG0700|consen 256 RIRSEHPDDPHIVVNKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLIL 335 (390)
T ss_pred HHHHhCCCCcceEeeccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEE
Confidence 8876642 1111112235888999999999998887 34889999999999997889999
Q ss_pred EcCCCCCCCCHHHHHHHHHcc----CCHHHHHHHHHHHHHHC
Q 026595 184 ASDGLWKVMSNQEAVDIARKF----KDPQKAAKQLTAEALKR 221 (236)
Q Consensus 184 ~SDGv~~~l~~~~i~~~~~~~----~~~~~~a~~l~~~a~~~ 221 (236)
+|||+|++|+++|.++++... -.-+.+|+.|++.|+.+
T Consensus 336 ASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~A~hLIr~aL~~ 377 (390)
T KOG0700|consen 336 ASDGLWEYLSNEEAVSLVHEFISGKFPDGNPATHLIRHALGR 377 (390)
T ss_pred eccchhhhcChHHHHHHHHHhhccCCCCCCHHHHHHHHHHhh
Confidence 999999999999999999874 23467899999988764
No 12
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-27 Score=189.75 Aligned_cols=202 Identities=25% Similarity=0.298 Sum_probs=137.7
Q ss_pred CCceEeeeeecCCCceEEEEEEeCCCCchH----HHHHHHHHHHHH----HhcccCCcCHHHHHHHHHHHHHHHHHhccC
Q 026595 2 EDYHVAKFVQLQGHELGLFAIYDGHLGETV----PAYLQKHLFSNI----LKEEEFWVDPQRSISKAYEKTDQAILSHSS 73 (236)
Q Consensus 2 eD~~~~~~~~~~~~~~~~~~V~DG~Gg~~~----a~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 73 (236)
||+||+..+ .+..+.|||||+|||.- +...++.++... ......+.+|...|..++.+ ++.. +
T Consensus 92 EDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~----l~~~-~ 162 (330)
T KOG1379|consen 92 EDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAE----LKSQ-K 162 (330)
T ss_pred CcceeeccC----cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHH----Hhhc-C
Confidence 899998766 66789999999999932 444444444433 33344455776666655544 4332 2
Q ss_pred CCCCCCcceEEEEEEe-CCEEEEEecCcceEEEEeCCceeeCCCCCCCchhhhHHHhcCCeEecCCCCCCcccCceeccc
Q 026595 74 DLGRGGSTAVTAILIN-GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSR 152 (236)
Q Consensus 74 ~~~~~~~tt~~~~~~~-~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr 152 (236)
.+..+++|+|++++-. +++|+++|+|||...++|+|++++.|+.+.. +|.. ++++..-++. ...
T Consensus 163 ~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H-----------~FN~--PyQLs~~p~~--~~~ 227 (330)
T KOG1379|consen 163 VPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQH-----------YFNT--PYQLSSPPEG--YSS 227 (330)
T ss_pred CCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchhee-----------ccCC--ceeeccCCcc--ccc
Confidence 2223455555554443 8899999999999999999999999987732 1111 1111010000 011
Q ss_pred cccccCCCCCcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc-----cCCHHHHHHHHHHHHHHC------
Q 026595 153 AFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK-----FKDPQKAAKQLTAEALKR------ 221 (236)
Q Consensus 153 ~lG~~~~~~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~-----~~~~~~~a~~l~~~a~~~------ 221 (236)
++++ .+-..+.+.+++.. ||+||++|||+||++.+++|.+++.. ...++..|+.+++.|...
T Consensus 228 ~~~d------~p~~ad~~~~~v~~-GDvIilATDGlfDNl~e~~Il~il~~~~~~~~~~lq~~A~~ia~~Ar~ls~d~~~ 300 (330)
T KOG1379|consen 228 YISD------VPDSADVTSFDVQK-GDVIILATDGLFDNLPEKEILSILKGLDARGNLDLQVTAQKIAEKARELSRDPKF 300 (330)
T ss_pred cccC------CccccceEEEeccC-CCEEEEecccccccccHHHHHHHHHHhhccccccHHHHHHHHHHHHHHhccCcCc
Confidence 2222 23456788899997 99999999999999999999999965 357899999999988642
Q ss_pred -----------------CCCCCcEEEEEEe
Q 026595 222 -----------------DSKDDISCVVVRF 234 (236)
Q Consensus 222 -----------------~~~Dn~Tvi~v~~ 234 (236)
|.+||||+++..+
T Consensus 301 ~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 301 QSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred CChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 4589999999753
No 13
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.91 E-value=3.3e-23 Score=166.15 Aligned_cols=226 Identities=31% Similarity=0.469 Sum_probs=164.7
Q ss_pred eecCCCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcc------------------------c----------------C
Q 026595 10 VQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEE------------------------E----------------F 49 (236)
Q Consensus 10 ~~~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~------------------------~----------------~ 49 (236)
.+-..-++.+|-+||||.|..+|-.+++.+.+.+.+.. . .
T Consensus 137 ~~a~~~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~ 216 (493)
T KOG1323|consen 137 MFAPRADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRH 216 (493)
T ss_pred ccCCCCcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCch
Confidence 33445778999999999999888777776655543220 0 0
Q ss_pred CcCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEEeCCEEEEEecCcceEEEEeCCceeeCCCCCCCchhhhHHHh
Q 026595 50 WVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIED 129 (236)
Q Consensus 50 ~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~ 129 (236)
.......|+.+|+..+..|.+........||+|.++++.--+++|++|.||||+.++|++.+..++++-++.+|++|++.
T Consensus 217 E~LViGAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTPetERqRlQ~ 296 (493)
T KOG1323|consen 217 EHLVIGALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTPETERQRLQE 296 (493)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCcHHHHHHHHH
Confidence 00123568889999988887766655566666666666669999999999999999999999999999999999999887
Q ss_pred cCCeEecC---------------------------------------------------CCCCCcccCceeccccccccC
Q 026595 130 KGGFVSNM---------------------------------------------------PGDVPRVNGQLAVSRAFGDKS 158 (236)
Q Consensus 130 ~g~~~~~~---------------------------------------------------~~~~~~~~~~~~~tr~lG~~~ 158 (236)
.+ +..++ .+.-.+.-..+.+||-+|+..
T Consensus 297 La-f~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~ 375 (493)
T KOG1323|consen 297 LA-FRNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHH 375 (493)
T ss_pred Hh-hcChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcce
Confidence 63 11111 000011123557899999887
Q ss_pred CC---------CCcccCcceEEEEeCC----CCcEEEEEcCCCCCCCCHHHHHHHHHcc------CCH---HHHHHHHHH
Q 026595 159 LK---------SHLRSDPDIQNTILDG----RSDVLVLASDGLWKVMSNQEAVDIARKF------KDP---QKAAKQLTA 216 (236)
Q Consensus 159 ~~---------~~v~~~p~~~~~~l~~----~~d~lll~SDGv~~~l~~~~i~~~~~~~------~~~---~~~a~~l~~ 216 (236)
++ |.+...|+++..++.+ .+|++||+|||+||.+++++...+++.. .+| ..+|+.|+.
T Consensus 376 Lkv~dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva 455 (493)
T KOG1323|consen 376 LKVVDSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVA 455 (493)
T ss_pred eeeecCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHH
Confidence 75 3466788888888773 4689999999999999999999888762 222 357777877
Q ss_pred HHHHC-------------CCCCCcEEEEEEeCC
Q 026595 217 EALKR-------------DSKDDISCVVVRFRG 236 (236)
Q Consensus 217 ~a~~~-------------~~~Dn~Tvi~v~~~~ 236 (236)
.|... ++-|||||.||.+.+
T Consensus 456 ~arg~~k~rgWr~~n~~lgSgDDIsVfVIPL~~ 488 (493)
T KOG1323|consen 456 AARGQQKDRGWRMNNGGLGSGDDISVFVIPLKY 488 (493)
T ss_pred HhcCccCCCceeccCCCcCCCCceEEEEEeccC
Confidence 76321 356999999998753
No 14
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-20 Score=169.16 Aligned_cols=216 Identities=27% Similarity=0.426 Sum_probs=186.7
Q ss_pred CCceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEEe----
Q 026595 14 GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILIN---- 89 (236)
Q Consensus 14 ~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~---- 89 (236)
.++.+.|+.+||-+-.+..+.+...+.+.+.++.+...+-.+.|+.+|...|+++...+... +++.+.+-+..
T Consensus 548 ~~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~et~~mr~~fl~~~rklg~~g~~l---g~~~~~~~i~~d~~~ 624 (1081)
T KOG0618|consen 548 LNPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGNETEQMRNTFLRLNRKLGEEGQVL---GGSVVLCQIVEDSLS 624 (1081)
T ss_pred cCCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHhhhhhhhhccc---cchhhheeecccccC
Confidence 36678999999999999999999999998888777666667789999999999996655433 44433333332
Q ss_pred ---CCEEEEEecCcceEEEEeCCceeeCCCCCCCc---hhhhHHHhcCCeEecCCCCCCcccCceeccccccccCCCCCc
Q 026595 90 ---GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN---TERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHL 163 (236)
Q Consensus 90 ---~~~~~~a~vGDsr~~~~r~~~~~~lt~dh~~~---~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr~lG~~~~~~~v 163 (236)
...++.||+|+|++.+.++|+-.++|+-.... .|.+|++..+|++.+ ....+|+...||++|.....|.+
T Consensus 625 ~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~i~e----d~k~ngvt~~tR~iG~~~l~P~v 700 (1081)
T KOG0618|consen 625 PASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGFITE----DNKLNGVTSSTRAIGPFSLFPHV 700 (1081)
T ss_pred cccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCeecC----CCeeeceeeeeeecccccccccc
Confidence 34789999999999999999877777765333 899999999999995 34778888999999999999999
Q ss_pred ccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHccCCHHHHHHHHHHHHHHCCCCCCcEEEEEEeCC
Q 026595 164 RSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARKFKDPQKAAKQLTAEALKRDSKDDISCVVVRFRG 236 (236)
Q Consensus 164 ~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~~~Dn~Tvi~v~~~~ 236 (236)
.|+|++....|.+++++||+++-++|+.++-++..+.++...+|-.+|++|.+.|...|..||++++||++.+
T Consensus 701 ~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL~AAkKL~d~AqSYgc~~nv~vlVv~l~~ 773 (1081)
T KOG0618|consen 701 LPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPLLAAKKLCDLAQSYGCAENVSVLVVRLNH 773 (1081)
T ss_pred cCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchHHHHHHHHHHHHhcccccCeeEEEEEeec
Confidence 9999999999999899999999999999999999999998899999999999999999999999999999864
No 15
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.85 E-value=4e-19 Score=138.45 Aligned_cols=160 Identities=23% Similarity=0.229 Sum_probs=122.0
Q ss_pred CceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEE--eCCE
Q 026595 15 HELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILI--NGQR 92 (236)
Q Consensus 15 ~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~--~~~~ 92 (236)
++..+++|+||||+...|..++..+...+.+...... .+.+.+..+|+.+..... ..+++|++++++ .+++
T Consensus 28 ~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~----~~~~~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~ 100 (193)
T smart00331 28 EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI----SLSQILERLNRAIYENGE---DGMFATLFLALYDFAGGT 100 (193)
T ss_pred CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC----CHHHHHHHHHHHHHhcCC---CCcEEEEEEEEEECCCCE
Confidence 5578999999999998888888888887765433222 256677778888876522 346788888777 5889
Q ss_pred EEEEecCcceEEEEe-CCceeeCCCCCCCchhhhHHHhcCCeEecCCCCCCcccCceeccccccccCCCCCcccCcceEE
Q 026595 93 LWVANVGDSRAVLST-AGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQN 171 (236)
Q Consensus 93 ~~~a~vGDsr~~~~r-~~~~~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr~lG~~~~~~~v~~~p~~~~ 171 (236)
++++|+||+++|+++ ++...+.+++. +..+|... ..+++...
T Consensus 101 l~~~~~Gd~~~~~~~~~~~~~~~~~~~--------------------------------~~~lG~~~-----~~~~~~~~ 143 (193)
T smart00331 101 LSYANAGHSPPYLLRADGGLVEDLDDL--------------------------------GAPLGLEP-----DVEVDVRE 143 (193)
T ss_pred EEEEeCCCCceEEEECCCCeEEEcCCC--------------------------------CceeeeCC-----CCcceeEE
Confidence 999999999999999 55544444332 23455433 34577888
Q ss_pred EEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHcc--CCHHHHHHHHHHHHH
Q 026595 172 TILDGRSDVLVLASDGLWKVMSNQEAVDIARKF--KDPQKAAKQLTAEAL 219 (236)
Q Consensus 172 ~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~~--~~~~~~a~~l~~~a~ 219 (236)
+++.+ +|.|+|+|||+++.+.++++.++++++ .+++++++.+.+++.
T Consensus 144 ~~l~~-gd~l~l~TDGl~e~~~~~~l~~~l~~~~~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 144 LTLEP-GDLLLLYTDGLTEARNPERLEELLEELLGSPPAEIAQRILEELL 192 (193)
T ss_pred EeeCC-CCEEEEECCCccccCChHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 88887 999999999999999999999999875 468888988888764
No 16
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.85 E-value=1e-20 Score=149.59 Aligned_cols=168 Identities=20% Similarity=0.231 Sum_probs=91.2
Q ss_pred CCceEeeeeecCCCceEEEEEEeCCCCchHHHHHHHHHHH----HHHhcccCCcC--HHHHHHHHHHHHHHHH-----Hh
Q 026595 2 EDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFS----NILKEEEFWVD--PQRSISKAYEKTDQAI-----LS 70 (236)
Q Consensus 2 eD~~~~~~~~~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~----~~~~~~~~~~~--~~~~l~~~~~~~~~~l-----~~ 70 (236)
||++.+... ++..+++||||+||...+..+++.+++ .+.+....... ....++.+...+...+ ..
T Consensus 13 qD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (212)
T PF13672_consen 13 QDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSIVRAFQSAK 88 (212)
T ss_dssp -EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH----HHH
T ss_pred CCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 788874333 445667999999988655554444444 44433322211 1122233333332211 11
Q ss_pred ccCCCCCCCcceEEEEEEeCCEEEEEecCcceEEE-EeCCceeeCCCCCCCchhhhHHHhcCCeEecCCCCCCcccCcee
Q 026595 71 HSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVL-STAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLA 149 (236)
Q Consensus 71 ~~~~~~~~~~tt~~~~~~~~~~~~~a~vGDsr~~~-~r~~~~~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~ 149 (236)
........++||++++++.++.++++|+||||+|+ .+++++..++.+|+.. .. .
T Consensus 89 ~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~~-----~~--------------------~ 143 (212)
T PF13672_consen 89 QADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSGE-----YP--------------------N 143 (212)
T ss_dssp HHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BHH-----HH--------------------H
T ss_pred hccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccch-----hh--------------------h
Confidence 11334567899999999999999999999999975 5899999999999411 00 1
Q ss_pred ccccccccCCCCCcccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHH-HHHHHHc
Q 026595 150 VSRAFGDKSLKSHLRSDPDIQNTILDGRSDVLVLASDGLWKVMSNQE-AVDIARK 203 (236)
Q Consensus 150 ~tr~lG~~~~~~~v~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~-i~~~~~~ 203 (236)
.++.+..... ....++..+.+.+ ++.|+|||||||+.+...+ +..++.+
T Consensus 144 ~~~~~~~~~~----~~~~~~~~~~~~~-~d~ilL~SDG~~~~l~~~~~~~~~l~~ 193 (212)
T PF13672_consen 144 QTRSLTGDDP----EPDVQYGSIPLEE-GDVILLCSDGVWDNLRSYEDLEQFLKD 193 (212)
T ss_dssp CTTSCCHHCC----CTETEEEEEE--T-T-EEEEE-HHHHTTS-HHHHHHHH---
T ss_pred hhhccCcccc----ccCCeEEEEEcCC-CCEEEEECcCccccCCCHHHHHHHhhh
Confidence 1222222210 2234666677666 9999999999999998654 6677655
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.78 E-value=5.9e-17 Score=148.77 Aligned_cols=174 Identities=19% Similarity=0.181 Sum_probs=128.4
Q ss_pred CceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEEe--CCE
Q 026595 15 HELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQR 92 (236)
Q Consensus 15 ~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~ 92 (236)
++...++|+||+|+...|...+..+.+.+.+......+ ...++..+|..+..+.+. ...+|+.+++++ .++
T Consensus 578 ~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~----~~~ai~~lN~~L~~~~~~---~~faTl~l~~IDl~~g~ 650 (764)
T TIGR02865 578 AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFD----REVAIKTVNSILSLRSTD---EKFSTLDLSVIDLYTGQ 650 (764)
T ss_pred CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHhCCCC---CeEEEEEEEEEECCCCe
Confidence 55678999999998877777766666655432222222 366778888887655333 357888888775 789
Q ss_pred EEEEecCcceEEEEeCCceeeCCCCCCCchhhhHHHhcCCeEecCCCCCCcccCceeccccccccCCCCCcccCcceEEE
Q 026595 93 LWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQNT 172 (236)
Q Consensus 93 ~~~a~vGDsr~~~~r~~~~~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr~lG~~~~~~~v~~~p~~~~~ 172 (236)
+.++++|+++.|++|++++..++..+.+ +|-.. ..+++..+.
T Consensus 651 ~~~~~aG~~p~~i~r~~~v~~i~s~~lP---------------------------------lGil~-----~~~~~~~~~ 692 (764)
T TIGR02865 651 AEFVKVGAVPSFIKRGAKVEVIRSSNLP---------------------------------IGILD-----EVDVELVRK 692 (764)
T ss_pred EEEEecCCCceEEEECCEEEEecCCCce---------------------------------eEecc-----CCccceEEE
Confidence 9999999999999999888777654311 22211 346777888
Q ss_pred EeCCCCcEEEEEcCCCCCCCCHH-----HHHHHHHc--cCCHHHHHHHHHHHHHHCC---CCCCcEEEEEEe
Q 026595 173 ILDGRSDVLVLASDGLWKVMSNQ-----EAVDIARK--FKDPQKAAKQLTAEALKRD---SKDDISCVVVRF 234 (236)
Q Consensus 173 ~l~~~~d~lll~SDGv~~~l~~~-----~i~~~~~~--~~~~~~~a~~l~~~a~~~~---~~Dn~Tvi~v~~ 234 (236)
++.+ ||+|+|+|||+++..++. .+.+++++ ..+|++.++.|++.+.+.. ..||+|++++++
T Consensus 693 ~L~~-GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~~~~p~ela~~Il~~a~~~~~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 693 KLKN-GDLIVMVSDGVLEGEKEVEGKVLWLVRKLKETNTNDPEEIAEYLLEKAKELRSGKIKDDMTVIVAKV 763 (764)
T ss_pred EeCC-CCEEEEECCCCCcCCcccccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEEEe
Confidence 8887 999999999999987643 37777765 3589999999999998643 479999999986
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.73 E-value=3e-15 Score=116.46 Aligned_cols=176 Identities=19% Similarity=0.192 Sum_probs=118.7
Q ss_pred CceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEEe--CCE
Q 026595 15 HELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQR 92 (236)
Q Consensus 15 ~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~ 92 (236)
++..+++|+|++|..-.|...+..+...+......... ..+.+..+|+.+....... ...+|++++.++ ++.
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~~----p~~~l~~ln~~l~~~~~~~--~~~~t~~~~~~d~~~~~ 75 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGLD----PEELLEALNRRLYRDLKGD--NRYATACYAIIDPETGT 75 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS----HHHHHHHHHHHHHHHTTTT--STTEEEEEEEEETTTTE
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHHHHHHHHHHHhhhc--cccceEEEEEecccceE
Confidence 56789999999997766666666665555433222222 5667777777775444332 245556655554 678
Q ss_pred EEEEecCcceEEEEeCC--ceeeCCCCCCCchhhhHHHhcCCeEecCCCCCCcccCceeccccccccCCCCCcccCcceE
Q 026595 93 LWVANVGDSRAVLSTAG--VAVQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQ 170 (236)
Q Consensus 93 ~~~a~vGDsr~~~~r~~--~~~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr~lG~~~~~~~v~~~p~~~ 170 (236)
++++++|++..+++|++ ....+.... -.+|... ..++...
T Consensus 76 l~~~~aG~~~~l~~~~~~~~~~~~~~~~---------------------------------~~lG~~~-----~~~~~~~ 117 (193)
T PF07228_consen 76 LTYANAGHPPPLLLRPGGREIEQLESEG---------------------------------PPLGIFE-----DIDYQEQ 117 (193)
T ss_dssp EEEEEESSSEEEEEETTCTEEEEETCSS---------------------------------BBCSSSC-----TTCEEEE
T ss_pred EEEeCCCCCCEEEEeccccceeecccCc---------------------------------cceeeec-----cccccce
Confidence 99999999999999983 333332211 1144333 3466677
Q ss_pred EEEeCCCCcEEEEEcCCCCCCCCHH-------HHHHHHHc--cCCHHHHHHHHHHHHHHC---CCCCCcEEEEEEeC
Q 026595 171 NTILDGRSDVLVLASDGLWKVMSNQ-------EAVDIARK--FKDPQKAAKQLTAEALKR---DSKDDISCVVVRFR 235 (236)
Q Consensus 171 ~~~l~~~~d~lll~SDGv~~~l~~~-------~i~~~~~~--~~~~~~~a~~l~~~a~~~---~~~Dn~Tvi~v~~~ 235 (236)
++++.+ ||.|+|+|||+++....+ .+.+++.+ ..++++.++.+.+.+.+. ...||+|+++++++
T Consensus 118 ~~~l~~-gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~DD~tvl~~~~~ 193 (193)
T PF07228_consen 118 EIQLEP-GDRLLLYTDGLFEALNEDGEFFGEERLLELLDENRGLSPQEIIDALLEAIDRFGKGPLRDDITVLVIRRQ 193 (193)
T ss_dssp EEE--T-TEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHTTS-HHHHHHHHHHHHHHHTTSSTSS-EEEEEEEE-
T ss_pred EEEecc-ccEEEEeCCChhhccCCccchhHHHHHHHHHhhccCCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEEEC
Confidence 788887 999999999999998433 44677764 367999999999999873 46799999999975
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=99.07 E-value=7.3e-08 Score=82.45 Aligned_cols=175 Identities=16% Similarity=0.122 Sum_probs=120.6
Q ss_pred ceEEEEEEeCCCCchHHHHHHHHHHHHHHhcccC-CcCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEEe--CCE
Q 026595 16 ELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF-WVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQR 92 (236)
Q Consensus 16 ~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~--~~~ 92 (236)
....++|+|.+|-.-.|..........+...... ..+| ...++.+|+.+....... +-+|+...+++ .+.
T Consensus 174 ~~~~i~I~DvsG~Gv~aal~m~~~~~~~~~~~~~~~~~p----~~~l~~~n~~~~~~~~~~---~f~T~~~~~~d~~~~~ 246 (367)
T COG2208 174 KRLRIGIGDVSGKGVPAALLMLMPKLALRLLLESGPLDP----ADVLETLNRVLKQNLEED---MFVTLFLGVYDLDSGE 246 (367)
T ss_pred cEEEEEEEeccCCCHHHHHHHHHHHHHHHHhhhcccCCH----HHHHHHHHHHHHhcccCC---cEEEEEEEEEeccCCE
Confidence 5788899999995544444433333333322222 2333 556677777777665543 66677766665 779
Q ss_pred EEEEecCcceEEEEeCCce---eeCCCCCCCchhhhHHHhcCCeEecCCCCCCcccCceeccccccccCCCCCcccCcce
Q 026595 93 LWVANVGDSRAVLSTAGVA---VQMTTDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDI 169 (236)
Q Consensus 93 ~~~a~vGDsr~~~~r~~~~---~~lt~dh~~~~e~~~~~~~g~~~~~~~~~~~~~~~~~~~tr~lG~~~~~~~v~~~p~~ 169 (236)
+.++++|.--.++++.+.. ..+. .....+|... ...+.+
T Consensus 247 l~y~~aGH~p~~i~~~~~~~~~~~l~---------------------------------~~g~piG~~~-----~~~~~~ 288 (367)
T COG2208 247 LTYSNAGHEPALILSADGEIEVEDLT---------------------------------ALGLPIGLLP-----DYQYEV 288 (367)
T ss_pred EEEeeCCCCCeeEEEcCCCceeEEcc---------------------------------CCCceeeecC-----Cccchh
Confidence 9999999999999987542 2222 2333455444 457777
Q ss_pred EEEEeCCCCcEEEEEcCCCCC-------CCCHHHHHHHHHc--cCCHHHHHHHHHHHHHHC----CCCCCcEEEEEEeCC
Q 026595 170 QNTILDGRSDVLVLASDGLWK-------VMSNQEAVDIARK--FKDPQKAAKQLTAEALKR----DSKDDISCVVVRFRG 236 (236)
Q Consensus 170 ~~~~l~~~~d~lll~SDGv~~-------~l~~~~i~~~~~~--~~~~~~~a~~l~~~a~~~----~~~Dn~Tvi~v~~~~ 236 (236)
...++.+ ||.+++.|||+.+ .+..+...+++.. ..+++++++.+.+..... ...||+|++++++.+
T Consensus 289 ~~~~l~~-gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~i~~~l~~~~~~~~~~DDiTll~lk~~~ 367 (367)
T COG2208 289 ASLQLEP-GDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLLGQPAEEILEAILESLEELQGDQIQDDDITLLVLKVKK 367 (367)
T ss_pred eeEEecC-CCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhCCccccCceEEEEEEecC
Confidence 8888887 9999999999999 5777777777773 358889998888887663 245889999999863
No 20
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=67.56 E-value=3.4 Score=26.45 Aligned_cols=22 Identities=18% Similarity=0.234 Sum_probs=17.6
Q ss_pred CCCcEEEEEcCCCCCCCCHHHH
Q 026595 176 GRSDVLVLASDGLWKVMSNQEA 197 (236)
Q Consensus 176 ~~~d~lll~SDGv~~~l~~~~i 197 (236)
..|..+++++||+|=.+....+
T Consensus 25 ~~G~Rllva~nGv~lEv~r~WL 46 (72)
T PF09436_consen 25 RPGHRLLVASNGVFLEVRRPWL 46 (72)
T ss_pred cCCcEEEEecCcEEEEEechHH
Confidence 3599999999999977665544
No 21
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=61.37 E-value=6.5 Score=26.65 Aligned_cols=27 Identities=19% Similarity=0.442 Sum_probs=22.4
Q ss_pred CCcEEEEEcCCCCCCCCHHHHHHHHHc
Q 026595 177 RSDVLVLASDGLWKVMSNQEAVDIARK 203 (236)
Q Consensus 177 ~~d~lll~SDGv~~~l~~~~i~~~~~~ 203 (236)
++|-++|+.|||+-.+...+..+-++.
T Consensus 24 ~~D~vlL~qdGV~aAl~~~~~~~sl~~ 50 (96)
T COG2168 24 EGDAVLLLQDGVYAALKGNRYLASLRE 50 (96)
T ss_pred ccCeEEEEcccchhhhcCcHHHHHHhc
Confidence 489999999999999888776666655
No 22
>PRK10693 response regulator of RpoS; Provisional
Probab=54.20 E-value=1.3e+02 Score=25.01 Aligned_cols=93 Identities=11% Similarity=0.055 Sum_probs=50.5
Q ss_pred CceEEEEEEe--CCCCch-HHHHHHHHHHHHHHhccc-CCcCHHHHHHHHHHHHHHHHHhccCCCCCCCcceEEEEEEe-
Q 026595 15 HELGLFAIYD--GHLGET-VPAYLQKHLFSNILKEEE-FWVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILIN- 89 (236)
Q Consensus 15 ~~~~~~~V~D--G~Gg~~-~a~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~tt~~~~~~~- 89 (236)
++...|.++| |||++. .|......++..+++... ............+..+|+.+....... . -|+...+++
T Consensus 161 ~~~~~~~~~DvsGhg~hg~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~~~---~-~t~~~~~~d~ 236 (303)
T PRK10693 161 DNDLAFYCLDVTRAGDNGVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPG---Q-FPLLVGYYHR 236 (303)
T ss_pred CCcEEEEEEecCCCCcccHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCCCc---e-eeEEEEEEEc
Confidence 3445555666 666663 444455554554443210 000000114666778888887763322 2 345555554
Q ss_pred -CCEEEEEecCcceEEEEeCCce
Q 026595 90 -GQRLWVANVGDSRAVLSTAGVA 111 (236)
Q Consensus 90 -~~~~~~a~vGDsr~~~~r~~~~ 111 (236)
.+.+.+++.|....++-.++.+
T Consensus 237 ~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 237 ELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred CCCeEEEEeCCCCCEEecCCeEE
Confidence 5689999999999874333333
No 23
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=48.69 E-value=41 Score=25.88 Aligned_cols=45 Identities=27% Similarity=0.494 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCCCC---C--------CHHHHHHHHHc----cCCHHHHHHHHHHHHHHCC
Q 026595 178 SDVLVLASDGLWKV---M--------SNQEAVDIARK----FKDPQKAAKQLTAEALKRD 222 (236)
Q Consensus 178 ~d~lll~SDGv~~~---l--------~~~~i~~~~~~----~~~~~~~a~~l~~~a~~~~ 222 (236)
+|.+++.|.|||.- + ....+=+.+.. ..-|.+.|++|++.-.++|
T Consensus 71 DDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 71 DDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred CCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcC
Confidence 78899999999962 2 23333333332 2458999999999887775
No 24
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=40.67 E-value=51 Score=20.20 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=21.4
Q ss_pred CCHHHHHHHHHc-cCCHHHHHHHHHH
Q 026595 192 MSNQEAVDIARK-FKDPQKAAKQLTA 216 (236)
Q Consensus 192 l~~~~i~~~~~~-~~~~~~~a~~l~~ 216 (236)
.++++|-.++.+ +.+|++++++|+.
T Consensus 19 hse~eIya~L~ecnMDpnea~qrLL~ 44 (60)
T PF06972_consen 19 HSEEEIYAMLKECNMDPNEAVQRLLS 44 (60)
T ss_pred CCHHHHHHHHHHhCCCHHHHHHHHHh
Confidence 578899888876 6899999999986
No 25
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=35.70 E-value=62 Score=16.12 Aligned_cols=20 Identities=20% Similarity=0.386 Sum_probs=16.3
Q ss_pred EEeCCEEEEEecCcceEEEE
Q 026595 87 LINGQRLWVANVGDSRAVLS 106 (236)
Q Consensus 87 ~~~~~~~~~a~vGDsr~~~~ 106 (236)
+..++.+|++-.|..|+..|
T Consensus 9 v~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EETTSEEEEEECCCTEEEEE
T ss_pred EeCCCCEEEEECCCCEEEEC
Confidence 34788999999999988764
No 26
>PRK10795 penicillin-binding protein 2; Provisional
Probab=30.62 E-value=1.4e+02 Score=27.93 Aligned_cols=42 Identities=7% Similarity=0.199 Sum_probs=30.3
Q ss_pred CceEeeeeecCCCceEEEEEEeCCCCchHHHHHHHHHHHHHH
Q 026595 3 DYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNIL 44 (236)
Q Consensus 3 D~~~~~~~~~~~~~~~~~~V~DG~Gg~~~a~~~~~~~~~~~~ 44 (236)
.++|+.+...+++.+.++++.|.-|....+.-+++.+++.+.
T Consensus 572 ~~wFvgfaP~~~P~~av~V~ve~gg~g~~~~~ia~~il~~~~ 613 (634)
T PRK10795 572 HKLMTAFAPYNNPQVAVAIILENGGAGPAVGTIMRQILDHIM 613 (634)
T ss_pred ceEEEEEccCCCCeEEEEEEEecCCccchHHHHHHHHHHHHh
Confidence 458999999999999999999964422344556666666655
No 27
>PF04077 DsrH: DsrH like protein; InterPro: IPR007215 The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulphur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulphide moiety, delivered by the cysteine desulphurase IscS to TusA, then to TusBCD. The activated sulphur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulphur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulphur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulphur flux, such as oxidation from sulphide to molecular sulphur to sulphate [].; GO: 0002143 tRNA wobble position uridine thiolation, 0005737 cytoplasm; PDB: 2HYB_O 2HY5_C 1X9A_A 1RHX_A 2D1P_C.
Probab=27.00 E-value=12 Score=24.87 Aligned_cols=26 Identities=15% Similarity=0.450 Sum_probs=18.9
Q ss_pred CCcEEEEEcCCCCCCCCHHHHHHHHH
Q 026595 177 RSDVLVLASDGLWKVMSNQEAVDIAR 202 (236)
Q Consensus 177 ~~d~lll~SDGv~~~l~~~~i~~~~~ 202 (236)
++|.|+|.-|||+-.+........+.
T Consensus 18 ~~D~ilLiqDgV~~a~~~~~~~~~l~ 43 (88)
T PF04077_consen 18 EGDAILLIQDGVYAALKGSPYFKLLQ 43 (88)
T ss_dssp TT-EEEE-GGGGGGGBTTSTTHHHHH
T ss_pred CCCEEEeeHHHHHHHhcCCHHHHHHh
Confidence 48999999999999887766555554
No 28
>PRK13845 putative glycerol-3-phosphate acyltransferase PlsX; Provisional
Probab=26.79 E-value=2.9e+02 Score=24.51 Aligned_cols=26 Identities=15% Similarity=0.207 Sum_probs=17.9
Q ss_pred EEEEEeCCCCc---hHHHHHHHHHHHHHH
Q 026595 19 LFAIYDGHLGE---TVPAYLQKHLFSNIL 44 (236)
Q Consensus 19 ~~~V~DG~Gg~---~~a~~~~~~~~~~~~ 44 (236)
=.+||||..|. ...+-++..+.+.+.
T Consensus 323 DVVVcDGFtGNV~LKt~EG~a~~i~~~LK 351 (437)
T PRK13845 323 DVVVCDGFTGNVLLKFLESVGSVLLDVLR 351 (437)
T ss_pred CEEEeCCcchHHHHHHHHHHHHHHHHHHH
Confidence 37899999998 555555555555554
No 29
>COG0416 PlsX Fatty acid/phospholipid biosynthesis enzyme [Lipid metabolism]
Probab=26.43 E-value=2e+02 Score=24.47 Aligned_cols=27 Identities=19% Similarity=0.233 Sum_probs=19.3
Q ss_pred EEEEEeCCCCc---hHHHHHHHHHHHHHHh
Q 026595 19 LFAIYDGHLGE---TVPAYLQKHLFSNILK 45 (236)
Q Consensus 19 ~~~V~DG~Gg~---~~a~~~~~~~~~~~~~ 45 (236)
=.+||||..|. ..++-.+..+...+.+
T Consensus 224 DVvV~DGFtGNv~LKt~EG~a~~i~~~lK~ 253 (338)
T COG0416 224 DVVVTDGFTGNVVLKTAEGTAKFILSLLKE 253 (338)
T ss_pred CEEEeCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 37899999998 5566666666666543
No 30
>TIGR03735 PRTRC_A PRTRC system protein A. A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family is designated protein A.
Probab=26.09 E-value=40 Score=26.19 Aligned_cols=46 Identities=17% Similarity=0.284 Sum_probs=31.2
Q ss_pred CCCcEEEEEcCCCCCCCCHHHHHHHHHc--c-------------------CCHHHHHHHHHHHHHHC
Q 026595 176 GRSDVLVLASDGLWKVMSNQEAVDIARK--F-------------------KDPQKAAKQLTAEALKR 221 (236)
Q Consensus 176 ~~~d~lll~SDGv~~~l~~~~i~~~~~~--~-------------------~~~~~~a~~l~~~a~~~ 221 (236)
+.|..+++++||+|=.+....+.-+..- . .=+....+++++.|.+.
T Consensus 24 ~~g~r~~~a~~G~~lev~r~wl~~~~~~~~~~~~~~PYg~~~~~~~~~~g~Ip~~l~~~ii~hAr~~ 90 (192)
T TIGR03735 24 KPGHRFIVAADGVWREVRRPWLHAIQRVAPASPITVPYGAVEETLEFLCGPIPASLLEEFAEAARAA 90 (192)
T ss_pred cCCcEEEEecCcEEEEEecHHHHHHHHhcccccccccceeeeeeEEEecCCCCHHHHHHHHHHHHhc
Confidence 4589999999999988877766433321 0 12445667777777664
No 31
>PF14014 DUF4230: Protein of unknown function (DUF4230)
Probab=25.76 E-value=2.7e+02 Score=20.29 Aligned_cols=40 Identities=13% Similarity=0.232 Sum_probs=29.1
Q ss_pred ccCcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc
Q 026595 164 RSDPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK 203 (236)
Q Consensus 164 ~~~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~ 203 (236)
.|.|.+....++.+.--++-...|+|..++.++..++.+.
T Consensus 75 LP~~~i~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (157)
T PF14014_consen 75 LPPPEILSVEIDEDSIKVYDEKGGWFNPITPEDQNEAQKE 114 (157)
T ss_pred CCCcEEeeeecCccceEEEEccCCccCCCCHHHHHHHHHH
Confidence 5677777777775344566788899998888877766654
No 32
>cd08788 CARD_NOD2_2_CARD15 Caspase activation and recruitment domain of NOD2, repeat 2. Caspase activation and recruitment domain (CARD) similar to that found in human NOD2 (CARD15), repeat 2. NOD2 is a member of the Nod-like receptor (NLR) family, which plays a central role in the innate immune response. NLRs typically contain an N-terminal effector domain, a central nucleotide-binding domain and a C-terminal ligand-binding region of several leucine-rich repeats (LRRs). In NOD2, as well as NOD1, the N-terminal effector domain is a CARD. NOD2 contains two N-terminal CARD repeats. Mutations in NOD2 have been associated with Crohns disease and Blau syndrome. Nod2-CARDs have been shown to interact with the CARD domain of the downstream effector RICK (RIP2, CARDIAK), a serine/threonine kinase. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are pr
Probab=24.86 E-value=94 Score=20.37 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=21.9
Q ss_pred CCHHHHHHHHHccCCHHHHHHHHHHHHHHCC
Q 026595 192 MSNQEAVDIARKFKDPQKAAKQLTAEALKRD 222 (236)
Q Consensus 192 l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 222 (236)
++.+|...+.....++.+-|++|++.+..+|
T Consensus 29 is~~Ecd~Ir~p~~T~sqqARrLLD~V~~KG 59 (81)
T cd08788 29 FSSYDCDEIRLPIFTPSQQARRLLDLVKAKG 59 (81)
T ss_pred ccHhhcchhhcCCCChHHHHHHHHHHHHHHh
Confidence 4555555555556788888999998887765
No 33
>TIGR00182 plsX fatty acid/phospholipid synthesis protein PlsX. This protein of fatty acid/phospholipid biosynthesis, called PlsX after the member in Streptococcus pneumoniae, is proposed to be a phosphate acyltransferase that partners with PlsY (TIGR00023) in a two-step 1-acylglycerol-3-phosphate biosynthesis pathway alternative to the one-step PlsB (EC 2.3.1.15) pathway.
Probab=24.17 E-value=3.4e+02 Score=22.98 Aligned_cols=26 Identities=19% Similarity=0.232 Sum_probs=17.6
Q ss_pred EEEEEeCCCCc---hHHHHHHHHHHHHHH
Q 026595 19 LFAIYDGHLGE---TVPAYLQKHLFSNIL 44 (236)
Q Consensus 19 ~~~V~DG~Gg~---~~a~~~~~~~~~~~~ 44 (236)
=.+||||..|. ...+-+++.+.+.+.
T Consensus 211 DVvV~DGf~GNv~LK~~EG~~~~~~~~lk 239 (322)
T TIGR00182 211 DVLVCDGFTGNVVLKTMEGVAKTILSILK 239 (322)
T ss_pred CEEEcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999998 455555555555544
No 34
>cd08325 CARD_CASP1-like Caspase activation and recruitment domain found in Caspase-1 and related proteins. Caspase activation and recruitment domain (CARD) similar to those found in Caspase-1 (CASP1, ICE) and related proteins, including CARD-only proteins such as ICEBERG or CARD18, INCA (CARD17), CARD16 (COP1, PSEUDO-ICE), CARD8 (DACAR, NDPP1, TUCAN), and CARD12 (NLRC4), as well as ICE-like caspases such as CASP12, CASP5 (ICH-3) and CASP4 (TX, ICH-2). Caspases are aspartate-specific cysteine proteases with functions in apoptosis and immune signaling. CASP1 plays a central role in the cellular response to a wide variety of microbial and non-microbial stimuli, being activated by the inflammasome or the pyroptosome. CARD8 binds itself and the initiator caspase-9, interfering with the binding of APAF-1 and suppressing caspase-9 activation. CARD12 is a Nod-like receptor (NLR) that plays an important role in the innate immune response to Gram-negative bacteria. Caspase-4 (CASP4), -5 (CASP5),
Probab=23.97 E-value=2e+02 Score=18.77 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHccCCHHHHHHHHHHHHHHCC
Q 026595 191 VMSNQEAVDIARKFKDPQKAAKQLTAEALKRD 222 (236)
Q Consensus 191 ~l~~~~i~~~~~~~~~~~~~a~~l~~~a~~~~ 222 (236)
.+..+++..+-.......+-|+.|++....+|
T Consensus 30 Vl~~~E~e~i~~~~~t~~dkar~Lid~v~~KG 61 (83)
T cd08325 30 VLNEEEMEKIKEENNTIMDKARVLVDSVTEKG 61 (83)
T ss_pred CCCHHHHHHHHhccCCHHHHHHHHHHHHHHHh
Confidence 46778888877766678899999999888765
No 35
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=23.26 E-value=1.3e+02 Score=15.89 Aligned_cols=20 Identities=25% Similarity=0.537 Sum_probs=15.7
Q ss_pred CCEEEEEecCcceEEEEeCC
Q 026595 90 GQRLWVANVGDSRAVLSTAG 109 (236)
Q Consensus 90 ~~~~~~a~vGDsr~~~~r~~ 109 (236)
++++|+++-|+..+.++...
T Consensus 3 ~~~lyv~~~~~~~v~~id~~ 22 (42)
T TIGR02276 3 GTKLYVTNSGSNTVSVIDTA 22 (42)
T ss_pred CCEEEEEeCCCCEEEEEECC
Confidence 56789999988888888643
No 36
>PLN03148 Blue copper-like protein; Provisional
Probab=22.68 E-value=2e+02 Score=21.81 Aligned_cols=17 Identities=12% Similarity=0.188 Sum_probs=12.1
Q ss_pred EEEeCCCCcEEEEEcCC
Q 026595 171 NTILDGRSDVLVLASDG 187 (236)
Q Consensus 171 ~~~l~~~~d~lll~SDG 187 (236)
.+.|.+.|.+.++|+.|
T Consensus 89 ~v~L~~~G~~YFIcg~g 105 (167)
T PLN03148 89 FIPLNKAKRYYFICGNG 105 (167)
T ss_pred EEEecCCccEEEEcCCC
Confidence 35666668888888865
No 37
>PRK05331 putative phosphate acyltransferase; Provisional
Probab=22.31 E-value=3.2e+02 Score=23.24 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=17.4
Q ss_pred EEEEeCCCCc---hHHHHHHHHHHHHHH
Q 026595 20 FAIYDGHLGE---TVPAYLQKHLFSNIL 44 (236)
Q Consensus 20 ~~V~DG~Gg~---~~a~~~~~~~~~~~~ 44 (236)
.+||||..|. ...+-+++.+.+.+.
T Consensus 225 VvV~DGftGNv~LK~~EG~~~~~~~~lk 252 (334)
T PRK05331 225 VVVCDGFVGNVALKTSEGTAKMILSLLK 252 (334)
T ss_pred EEEECCchhHHHHHHHHHHHHHHHHHHH
Confidence 6899999998 455555555555554
No 38
>PRK02391 heat shock protein HtpX; Provisional
Probab=22.10 E-value=86 Score=26.11 Aligned_cols=37 Identities=16% Similarity=0.194 Sum_probs=27.4
Q ss_pred CcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc
Q 026595 166 DPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK 203 (236)
Q Consensus 166 ~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~ 203 (236)
.|+-...-... ...+|+.|||+.+.++++|+..++.-
T Consensus 103 ~~NAfa~G~~~-~~~~V~vt~gLl~~L~~~El~aVlaH 139 (296)
T PRK02391 103 VPNAFATGRSP-KNAVVCVTTGLMRRLDPDELEAVLAH 139 (296)
T ss_pred CCceEEecCCC-CCcEEEecHHHHhhCCHHHHHHHHHH
Confidence 34444444443 56778999999999999999888853
No 39
>PRK03982 heat shock protein HtpX; Provisional
Probab=21.82 E-value=1.1e+02 Score=25.21 Aligned_cols=37 Identities=16% Similarity=0.304 Sum_probs=27.0
Q ss_pred CcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc
Q 026595 166 DPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK 203 (236)
Q Consensus 166 ~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~ 203 (236)
.|+-......+ ....|..|||+.+.++++|+..++.-
T Consensus 95 ~~NAfa~G~~~-~~~~V~vt~gLl~~l~~~El~AVlAH 131 (288)
T PRK03982 95 TPNAFATGRDP-KHAVVAVTEGILNLLNEDELEGVIAH 131 (288)
T ss_pred CcceEEeccCC-CCeEEEeehHHHhhCCHHHHHHHHHH
Confidence 34444444443 56678899999999999999988853
No 40
>PF11813 DUF3334: Protein of unknown function (DUF3334); InterPro: IPR024513 This family of proteins are functionally uncharacterised. This family is only found in bacteria. Proteins in this family are typically between 227 to 238 amino acids in length.
Probab=21.44 E-value=47 Score=26.03 Aligned_cols=16 Identities=31% Similarity=0.756 Sum_probs=12.6
Q ss_pred CCceEEEEEEeC-CCCc
Q 026595 14 GHELGLFAIYDG-HLGE 29 (236)
Q Consensus 14 ~~~~~~~~V~DG-~Gg~ 29 (236)
.++..+|++||| .+|-
T Consensus 47 kPDiGCFvlFDGGFsGL 63 (229)
T PF11813_consen 47 KPDIGCFVLFDGGFSGL 63 (229)
T ss_pred CCCcceEEEecCCcceE
Confidence 388999999999 3444
No 41
>PRK05457 heat shock protein HtpX; Provisional
Probab=20.79 E-value=1.3e+02 Score=24.83 Aligned_cols=37 Identities=24% Similarity=0.233 Sum_probs=28.2
Q ss_pred CcceEEEEeCCCCcEEEEEcCCCCCCCCHHHHHHHHHc
Q 026595 166 DPDIQNTILDGRSDVLVLASDGLWKVMSNQEAVDIARK 203 (236)
Q Consensus 166 ~p~~~~~~l~~~~d~lll~SDGv~~~l~~~~i~~~~~~ 203 (236)
.|+-....... ...+|+.|+|+.+.++++|+..++.-
T Consensus 104 ~~NAfa~G~~~-~~~~V~vt~gLl~~L~~~El~aVlAH 140 (284)
T PRK05457 104 EINAFATGASK-NNSLVAVSTGLLQNMSRDEVEAVLAH 140 (284)
T ss_pred CceEEEecCCC-CCeEEEeehHHhhhCCHHHHHHHHHH
Confidence 35544444444 56789999999999999999988853
No 42
>COG5233 GRH1 Peripheral Golgi membrane protein [Intracellular trafficking and secretion]
Probab=20.05 E-value=2.3e+02 Score=23.98 Aligned_cols=28 Identities=18% Similarity=0.136 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCCCCCCHHHHHHHHHc
Q 026595 176 GRSDVLVLASDGLWKVMSNQEAVDIARK 203 (236)
Q Consensus 176 ~~~d~lll~SDGv~~~l~~~~i~~~~~~ 203 (236)
++.|+++-|+||.--.+.+.++.++.+.
T Consensus 207 PdEdyi~gs~dg~~~~~ge~~l~Dv~es 234 (417)
T COG5233 207 PDEDYIDGSSDGQPLEIGELDLEDVNES 234 (417)
T ss_pred CcccccccCCCcccccchhhHHHHHhhc
Confidence 3579999999999998899999888865
Done!