BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026597
MVDNANWELKNCCNRDQVRFLVTIGVFTVVILALWRTILLTPFKLITVFLHEASHAIACK
LTCGDVEGMQVHANEGGATQTRGGIYWLILPAGYLGSSFWGMALVLASTNLTTARIAAGC
LALALFIVLFIAQNWTLRGLCIGFIVFLAVIWVLQEETSVRILRYVILFIGVMNSLFSVY
DIYDDLISRRVHSSDAEKFAEVCPCPCNGVGWGVIWGIISFAFLCAAMYLGLVILS

High Scoring Gene Products

Symbol, full name Information P value
AT1G67060 protein from Arabidopsis thaliana 1.6e-95
CPS_1186
Putative membrane protein
protein from Colwellia psychrerythraea 34H 1.0e-13
CPS_1186
putative membrane protein
protein from Colwellia psychrerythraea 34H 1.0e-13
SO_2584
Membrane zinc metalloprotease
protein from Shewanella oneidensis MR-1 1.8e-06
SO_2584
hypothetical protein
protein from Shewanella oneidensis MR-1 1.8e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026597
        (236 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2019743 - symbol:AT1G67060 "AT1G67060" species...   950  1.6e-95   1
ASPGD|ASPL0000071635 - symbol:AN4854 species:162425 "Emer...   284  5.9e-25   1
UNIPROTKB|Q486T6 - symbol:CPS_1186 "Putative membrane pro...   178  1.0e-13   1
TIGR_CMR|CPS_1186 - symbol:CPS_1186 "putative membrane pr...   178  1.0e-13   1
UNIPROTKB|Q8EE06 - symbol:SO_2584 "Membrane zinc metallop...   127  1.8e-06   1
TIGR_CMR|SO_2584 - symbol:SO_2584 "hypothetical protein" ...   127  1.8e-06   1


>TAIR|locus:2019743 [details] [associations]
            symbol:AT1G67060 "AT1G67060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0005886 "plasma membrane"
            evidence=IDA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            eggNOG:NOG76042 HOGENOM:HOG000235024 EMBL:BT029386 EMBL:AK317440
            IPI:IPI00529725 RefSeq:NP_176877.2 UniGene:At.35696
            EnsemblPlants:AT1G67060.1 GeneID:843026 KEGG:ath:AT1G67060
            TAIR:At1g67060 InParanoid:A0JQ16 OMA:VIWGMIS PhylomeDB:A0JQ16
            ProtClustDB:CLSN2680779 Genevestigator:A0JQ16 Uniprot:A0JQ16
        Length = 234

 Score = 950 (339.5 bits), Expect = 1.6e-95, P = 1.6e-95
 Identities = 183/235 (77%), Positives = 199/235 (84%)

Query:     2 VDNANWELKNCCNRDQVRFLVTIGVFTVVILALWRTILLTPFKLITVFLHEASHAIACKL 61
             +D+ NWEL+ CCNR+Q  FL+TIGVFTVVIL LWRT LLTPFKLITVFLHEASHA+ACKL
Sbjct:     1 MDSPNWELRGCCNRNQNTFLITIGVFTVVILLLWRTFLLTPFKLITVFLHEASHAVACKL 60

Query:    62 TCGDVEGMQVHANEGGATQTRGGIYWLILPAGYLGSSFWGMALVLASTNLTTARIAAGCX 121
             TCGDVEGM+V+ANEGG+T TRGGIYWLILPAGYLGSSFWGMAL+LASTNL TARIAA   
Sbjct:    61 TCGDVEGMEVNANEGGSTTTRGGIYWLILPAGYLGSSFWGMALILASTNLLTARIAAAGL 120

Query:   122 XXXXXXXXXXXQNWTLRGLCIGFIVFLAVIWVLQEETSVRILRYVILFIGVMNSLFSVYD 181
                        +NWTLRGLCIGFIVFLAVIWVLQE T+V+ILRYVILFIGVMNSLFSVYD
Sbjct:   121 GLALFIVLFIAKNWTLRGLCIGFIVFLAVIWVLQELTTVKILRYVILFIGVMNSLFSVYD 180

Query:   182 IYDDLISRRVHSSDAEKFAEVCPCPCNXXXXXXXXXXXSFAFLCAAMYLGLVILS 236
             IYDDLISRRVHSSDAEKFAE+CPC C            SFAFLCA++YLGLVILS
Sbjct:   181 IYDDLISRRVHSSDAEKFAEICPC-CTGCGWGVIWGMISFAFLCASLYLGLVILS 234


>ASPGD|ASPL0000071635 [details] [associations]
            symbol:AN4854 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] EMBL:BN001303 EMBL:AACD01000083 RefSeq:XP_662458.1
            EnsemblFungi:CADANIAT00005554 GeneID:2872648 KEGG:ani:AN4854.2
            eggNOG:NOG76042 HOGENOM:HOG000235024 OMA:LSHEETH OrthoDB:EOG4BS0VN
            Uniprot:Q5B3M6
        Length = 269

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 74/192 (38%), Positives = 104/192 (54%)

Query:    22 VTIGV---FTVVILALWRTILLT----PFKLITVFLHEASHAIACKLTCGDVEGMQVHAN 74
             VT+GV   + VVI  LW    L     PFK++ +  HE  HAI    T G V+ + +  +
Sbjct:    34 VTLGVMAAYVVVIAILWNVPYLRYSLWPFKMLVIAFHEFGHAITACCTGGRVKSISLDPH 93

Query:    75 EGGATQTRGGIYWLILPAGYLGSSFWGMALVLASTNLTTARIAAGCXXXXXXXXXXXXQN 134
             EGG T  +GG+  + LPAGYLGSS  G  L+ A  N+  +++A+                
Sbjct:    94 EGGVTHMQGGMAAITLPAGYLGSSIIGALLIFAGFNIIASKVASIVLGVCFLLTLW---- 149

Query:   135 WTLRGLCIGFIVFLAV-----IWVLQEETSVRILRYVILFIGVMNSLFSVYDIYDDLISR 189
             W  R L     V LAV      W +    +   L++V+LFIGVM++L+SV+DI DDLI R
Sbjct:   150 WARRDLLTIVTVLLAVGLLVACWFIAHGEA---LKWVVLFIGVMSALYSVWDICDDLILR 206

Query:   190 RVHSSDAEKFAE 201
             +V+SSDA  FA+
Sbjct:   207 KVNSSDASVFAQ 218


>UNIPROTKB|Q486T6 [details] [associations]
            symbol:CPS_1186 "Putative membrane protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:NOG76042
            RefSeq:YP_267929.1 STRING:Q486T6 GeneID:3523105 KEGG:cps:CPS_1186
            PATRIC:21465621 HOGENOM:HOG000293005 OMA:LCWRRVD
            ProtClustDB:CLSK906786 BioCyc:CPSY167879:GI48-1267-MONOMER
            Uniprot:Q486T6
        Length = 226

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 56/173 (32%), Positives = 89/173 (51%)

Query:    17 QVRFLVTIGVFTVVILALWRTILLTPFKLITVFLHEASHAIACKLTCGDVEGMQVHANEG 76
             Q+ FL+   V  ++I  +   I+  P   +  + HE SH IA  LT G++  +Q+ AN  
Sbjct:    17 QLYFLL---VAAIIIRQI--PIVSIPLNWLESYFHEISHGIAALLTGGEIMRIQLFANGA 71

Query:    77 GATQTRGGIYWLILPAGYLGSSFWGMALV-LASTNLTTARIAAGCXXXXXXXXXXXXQNW 135
             G   TRGG+ ++I   GY G++FWG  L  LA+++  TA+I +G               W
Sbjct:    72 GLCTTRGGLSFIISFFGYAGATFWGWLLFKLANSHQRTAQIVSGFMIVLLLVSIIF---W 128

Query:   136 TLRGLCIGFIVFLAVIWVLQ-EETSVRILRYVILFIGV---MNSLFSVYDIYD 184
                 L I  I  LAV++VL  +   +  L+ ++ F G+   +NSLFS   ++D
Sbjct:   129 ARDLLTIIIISSLAVMFVLTIKMRRLYTLQVLLKFFGLSILLNSLFSPTYLFD 181


>TIGR_CMR|CPS_1186 [details] [associations]
            symbol:CPS_1186 "putative membrane protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016020 "membrane" evidence=ISS] EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:NOG76042 RefSeq:YP_267929.1
            STRING:Q486T6 GeneID:3523105 KEGG:cps:CPS_1186 PATRIC:21465621
            HOGENOM:HOG000293005 OMA:LCWRRVD ProtClustDB:CLSK906786
            BioCyc:CPSY167879:GI48-1267-MONOMER Uniprot:Q486T6
        Length = 226

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 56/173 (32%), Positives = 89/173 (51%)

Query:    17 QVRFLVTIGVFTVVILALWRTILLTPFKLITVFLHEASHAIACKLTCGDVEGMQVHANEG 76
             Q+ FL+   V  ++I  +   I+  P   +  + HE SH IA  LT G++  +Q+ AN  
Sbjct:    17 QLYFLL---VAAIIIRQI--PIVSIPLNWLESYFHEISHGIAALLTGGEIMRIQLFANGA 71

Query:    77 GATQTRGGIYWLILPAGYLGSSFWGMALV-LASTNLTTARIAAGCXXXXXXXXXXXXQNW 135
             G   TRGG+ ++I   GY G++FWG  L  LA+++  TA+I +G               W
Sbjct:    72 GLCTTRGGLSFIISFFGYAGATFWGWLLFKLANSHQRTAQIVSGFMIVLLLVSIIF---W 128

Query:   136 TLRGLCIGFIVFLAVIWVLQ-EETSVRILRYVILFIGV---MNSLFSVYDIYD 184
                 L I  I  LAV++VL  +   +  L+ ++ F G+   +NSLFS   ++D
Sbjct:   129 ARDLLTIIIISSLAVMFVLTIKMRRLYTLQVLLKFFGLSILLNSLFSPTYLFD 181


>UNIPROTKB|Q8EE06 [details] [associations]
            symbol:SO_2584 "Membrane zinc metalloprotease"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            GO:GO:0006508 GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
            HOGENOM:HOG000293005 OMA:LCWRRVD ProtClustDB:CLSK906786
            RefSeq:NP_718170.2 GeneID:1170286 KEGG:son:SO_2584 PATRIC:23524795
            Uniprot:Q8EE06
        Length = 233

 Score = 127 (49.8 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 46/162 (28%), Positives = 76/162 (46%)

Query:    25 GVFTV-VILALWRT---ILLTPFKLITVFLHEASHAIACKLTCGDVEGMQVHANEGGATQ 80
             G+F + ++LAL  T    +  PFK +  + HE SH IA  L+ G V  +Q+  N  G   
Sbjct:    25 GLFIIELMLALLITRIPYISVPFKWLESYFHELSHGIATVLSGGIVSHIQLFPNGAGLCF 84

Query:    81 TRGGIYWLILPAGYLGSSFWGMALVLASTNLTTARIAAGCXXXXXXXXXXXXQNWTLRGL 140
             ++GG   +I  AGY G++ WG  + L +T     R++                 W    L
Sbjct:    85 SQGGSTIMIGFAGYFGAACWGYIIYLLATWPRGIRVSFAFLGALVVFSGVL---WGRDLL 141

Query:   141 CIGFIVFLAVIWVLQEETSV-RILRYVILFIGV---MNSLFS 178
              +  +V L ++ +L  + S  +IL   +  IG+   +N+L S
Sbjct:   142 TMAILVVLTIVLLLPLKLSKNKILTQFLRIIGLVIMLNALAS 183


>TIGR_CMR|SO_2584 [details] [associations]
            symbol:SO_2584 "hypothetical protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] GO:GO:0006508
            GO:GO:0008237 EMBL:AE014299 GenomeReviews:AE014299_GR
            HOGENOM:HOG000293005 OMA:LCWRRVD ProtClustDB:CLSK906786
            RefSeq:NP_718170.2 GeneID:1170286 KEGG:son:SO_2584 PATRIC:23524795
            Uniprot:Q8EE06
        Length = 233

 Score = 127 (49.8 bits), Expect = 1.8e-06, P = 1.8e-06
 Identities = 46/162 (28%), Positives = 76/162 (46%)

Query:    25 GVFTV-VILALWRT---ILLTPFKLITVFLHEASHAIACKLTCGDVEGMQVHANEGGATQ 80
             G+F + ++LAL  T    +  PFK +  + HE SH IA  L+ G V  +Q+  N  G   
Sbjct:    25 GLFIIELMLALLITRIPYISVPFKWLESYFHELSHGIATVLSGGIVSHIQLFPNGAGLCF 84

Query:    81 TRGGIYWLILPAGYLGSSFWGMALVLASTNLTTARIAAGCXXXXXXXXXXXXQNWTLRGL 140
             ++GG   +I  AGY G++ WG  + L +T     R++                 W    L
Sbjct:    85 SQGGSTIMIGFAGYFGAACWGYIIYLLATWPRGIRVSFAFLGALVVFSGVL---WGRDLL 141

Query:   141 CIGFIVFLAVIWVLQEETSV-RILRYVILFIGV---MNSLFS 178
              +  +V L ++ +L  + S  +IL   +  IG+   +N+L S
Sbjct:   142 TMAILVVLTIVLLLPLKLSKNKILTQFLRIIGLVIMLNALAS 183


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.141   0.459    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      236       213   0.00084  112 3  11 22  0.39    32
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  191 KB (2107 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.17u 0.23s 15.40t   Elapsed:  00:00:01
  Total cpu time:  15.17u 0.23s 15.40t   Elapsed:  00:00:01
  Start:  Fri May 10 21:29:55 2013   End:  Fri May 10 21:29:56 2013

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