Query 026599
Match_columns 236
No_of_seqs 188 out of 448
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 17:26:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026599.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026599hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1am9a_ a.38.1.1 (A:) SREBP-1a 99.7 4.5E-17 3.3E-21 119.7 9.2 70 78-148 8-77 (80)
2 d1nkpb_ a.38.1.1 (B:) Max prot 99.6 1.7E-16 1.2E-20 116.8 8.2 74 79-153 5-79 (83)
3 d1nlwa_ a.38.1.1 (A:) Mad prot 99.6 5.5E-16 4E-20 113.1 9.5 71 79-150 4-76 (79)
4 d1nkpa_ a.38.1.1 (A:) Myc prot 99.6 4.8E-16 3.5E-20 115.4 8.9 75 79-154 9-85 (88)
5 d1uklc_ a.38.1.1 (C:) SREBP-2 99.5 2.2E-15 1.6E-19 106.0 5.7 56 88-144 1-56 (61)
6 d1a0aa_ a.38.1.1 (A:) Pho4 B/H 99.4 3.2E-14 2.4E-18 100.2 4.6 52 78-130 4-61 (63)
7 d1mdya_ a.38.1.1 (A:) Myod B/H 99.4 1.5E-13 1.1E-17 98.5 4.3 53 78-131 14-67 (68)
8 d1an4a_ a.38.1.1 (A:) Usf B/HL 99.3 4.4E-13 3.2E-17 94.8 3.7 52 78-130 7-63 (65)
9 d1seta1 a.2.7.1 (A:1-110) Sery 89.0 2.3 0.00016 30.4 10.2 53 123-175 37-97 (110)
10 d1lrza1 a.2.7.4 (A:245-309) Me 84.8 3.2 0.00023 28.2 8.4 53 121-173 3-61 (65)
11 d1seta1 a.2.7.1 (A:1-110) Sery 84.3 1.7 0.00012 31.2 7.1 56 120-175 27-90 (110)
12 d1fxka_ a.2.5.1 (A:) Prefoldin 72.8 13 0.00094 26.2 9.5 30 117-146 4-33 (107)
13 d1nkpa_ a.38.1.1 (A:) Myc prot 72.2 4.7 0.00034 27.7 6.1 30 145-174 55-84 (88)
14 d1fxkc_ a.2.5.1 (C:) Prefoldin 71.4 4.8 0.00035 29.1 6.3 33 123-155 3-35 (133)
15 d1fxkc_ a.2.5.1 (C:) Prefoldin 69.9 7.1 0.00052 28.1 7.0 36 116-154 86-121 (133)
16 d1t3ua_ d.244.1.1 (A:) ZapA ho 67.4 14 0.001 25.0 7.8 57 88-148 27-83 (92)
17 d1k4ta1 a.2.8.1 (A:641-712) Eu 66.7 6.9 0.0005 27.2 5.9 53 124-176 5-62 (72)
18 d1gqea_ e.38.1.1 (A:) Polypept 62.9 17 0.0013 31.2 9.2 52 89-140 25-77 (362)
19 d2p90a1 c.56.8.1 (A:6-274) Hyp 61.3 5.5 0.0004 32.2 5.3 42 133-174 222-263 (269)
20 d1nkpb_ a.38.1.1 (B:) Max prot 61.0 8.3 0.0006 26.0 5.5 30 145-174 50-79 (83)
21 d2azeb1 e.63.1.2 (B:201-301) T 58.5 9.9 0.00072 27.4 5.8 33 123-155 3-35 (101)
22 d1gs9a_ a.24.1.1 (A:) Apolipop 48.6 43 0.0032 24.1 8.8 20 87-106 46-65 (144)
23 d1fxka_ a.2.5.1 (A:) Prefoldin 47.6 19 0.0014 25.2 5.8 36 120-155 64-99 (107)
24 d1nlwa_ a.38.1.1 (A:) Mad prot 45.0 30 0.0022 22.8 6.2 27 146-172 51-77 (79)
25 d1ivsa1 a.2.7.3 (A:797-862) Va 44.4 27 0.0019 22.5 5.7 21 155-175 45-65 (66)
26 d1s35a2 a.7.1.1 (A:1169-1273) 39.8 46 0.0033 21.8 6.6 32 123-154 35-66 (105)
27 d1ab4a_ e.11.1.1 (A:) DNA Gyra 37.6 13 0.00093 33.0 4.1 34 114-149 428-461 (493)
28 d2b3tb1 e.38.1.1 (B:7-354) Pep 37.0 6.7 0.00049 33.7 2.0 84 91-175 2-89 (344)
29 d2clya1 f.52.1.1 (A:79-183) AT 36.0 71 0.0051 22.9 8.4 58 109-166 19-82 (105)
30 d2azeb1 e.63.1.2 (B:201-301) T 35.9 30 0.0022 24.7 5.3 17 159-175 18-34 (101)
31 d1qvra2 c.37.1.20 (A:149-535) 34.7 56 0.0041 27.7 7.8 20 104-124 225-245 (387)
32 d3bi1a1 a.48.2.1 (A:594-750) G 34.6 28 0.002 25.5 5.1 10 166-175 69-78 (157)
33 d1am9a_ a.38.1.1 (A:) SREBP-1a 33.3 49 0.0035 21.9 5.8 24 144-167 52-75 (80)
34 d1x4ta1 a.2.15.1 (A:7-86) Pre- 31.5 73 0.0053 22.1 6.5 26 153-178 50-75 (80)
35 d1uklc_ a.38.1.1 (C:) SREBP-2 31.1 42 0.0031 21.3 4.9 28 140-171 28-55 (61)
36 d2gyqa1 a.25.1.4 (A:1-160) Hyp 29.7 73 0.0053 24.1 6.9 29 155-183 50-78 (160)
37 d2f23a1 a.2.1.1 (A:3-77) GreA 29.4 76 0.0055 21.3 6.6 51 124-174 11-69 (75)
38 d1qvra2 c.37.1.20 (A:149-535) 29.4 1.4E+02 0.01 25.1 9.5 8 162-169 319-326 (387)
39 d1ecma_ a.130.1.1 (A:) Chorism 28.4 41 0.003 22.5 4.7 34 123-156 3-36 (91)
40 d1fioa_ a.47.2.1 (A:) Sso1 {Ba 27.4 97 0.0071 21.9 7.8 13 90-102 13-25 (196)
41 d2ncda_ c.37.1.9 (A:) Kinesin 27.0 10 0.00075 31.9 1.4 36 139-174 7-42 (368)
42 d1ykhb1 a.252.1.1 (B:2-130) RN 26.8 41 0.003 24.8 4.8 12 94-106 71-82 (129)
43 d1aipc1 a.5.2.2 (C:2-53) Elong 26.1 50 0.0037 21.1 4.5 29 120-148 3-39 (52)
44 d2azea1 e.63.1.1 (A:199-346) T 25.9 1E+02 0.0076 23.4 7.2 41 129-169 3-43 (148)
45 d2ncda_ c.37.1.9 (A:) Kinesin 25.7 23 0.0017 29.7 3.5 47 128-174 3-49 (368)
46 d2h9da1 a.130.1.1 (A:1-94) Sal 25.5 49 0.0036 22.5 4.7 51 123-174 10-60 (94)
47 d1x4ta1 a.2.15.1 (A:7-86) Pre- 25.3 1E+02 0.0073 21.3 6.8 28 141-168 45-72 (80)
48 d1cuna2 a.7.1.1 (A:116-219) Sp 24.0 88 0.0064 20.2 8.8 30 117-146 33-62 (104)
49 d2d8da1 a.130.1.1 (A:3-82) Cho 23.4 69 0.005 20.8 5.0 34 123-156 3-36 (80)
50 d1gqea_ e.38.1.1 (A:) Polypept 23.4 65 0.0047 27.3 6.1 17 89-105 9-25 (362)
51 d1xb2b1 a.5.2.2 (B:56-111) Elo 23.0 76 0.0056 20.5 5.0 31 118-148 3-41 (56)
52 d1lrza1 a.2.7.4 (A:245-309) Me 22.6 99 0.0072 20.3 5.8 46 129-175 4-49 (65)
53 d1ez3a_ a.47.2.1 (A:) Syntaxin 21.8 1.2E+02 0.0086 20.9 8.6 14 160-173 63-76 (124)
54 d1io1a_ e.32.1.1 (A:) Phase 1 21.6 1E+02 0.0075 23.2 6.4 19 157-175 52-70 (395)
55 d1rq0a_ e.38.1.1 (A:) Peptide 20.9 29 0.0021 29.5 3.2 21 157-177 61-81 (333)
56 d1j1va_ a.4.12.2 (A:) Chromoso 20.7 61 0.0045 22.0 4.4 37 87-129 41-77 (94)
No 1
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.69 E-value=4.5e-17 Score=119.70 Aligned_cols=70 Identities=33% Similarity=0.476 Sum_probs=63.0
Q ss_pred CcchhHHHHHHHHHHHhHHHHhhhcCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 026599 78 SSKACREKLRRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELK 148 (236)
Q Consensus 78 ~~ka~rER~RRdkLNerF~eL~slL~P~~~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk 148 (236)
..|+..||+||++||+.|.+|+++| |+...|+||++||..||+||++|+.+++.|++++..|..++..++
T Consensus 8 ~~H~~~Er~RR~~in~~~~~L~~ll-P~~~~k~~K~~iL~~a~~yI~~L~~~~~~L~~e~~~lk~~~~~~~ 77 (80)
T d1am9a_ 8 TAHNAIEKRYRSSINDKIIELKDLV-VGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSK 77 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-TCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 3699999999999999999999999 876679999999999999999999999999988888877765543
No 2
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.65 E-value=1.7e-16 Score=116.82 Aligned_cols=74 Identities=22% Similarity=0.325 Sum_probs=61.5
Q ss_pred cchhHHHHHHHHHHHhHHHHhhhcCCCC-CCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 026599 79 SKACREKLRRDRLNDKFVELASILEPGR-PPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNE 153 (236)
Q Consensus 79 ~ka~rER~RRdkLNerF~eL~slL~P~~-~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~EknE 153 (236)
.|+.+||+||++||+.|.+|+++| |+. ..|++|++||..||.||++|+.+++.|.++...|..+...|..+...
T Consensus 5 ~Hn~~Er~RR~~in~~f~~L~~ll-P~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 5 HHNALERKRRDHIKDSFHSLRDSV-PSLQGEKASRAQILDKATEYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTS-GGGTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999999999 653 35899999999999999999999988887766666555555544443
No 3
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=5.5e-16 Score=113.07 Aligned_cols=71 Identities=21% Similarity=0.273 Sum_probs=60.9
Q ss_pred cchhHHHHHHHHHHHhHHHHhhhcCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 026599 79 SKACREKLRRDRLNDKFVELASILEPGR--PPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAE 150 (236)
Q Consensus 79 ~ka~rER~RRdkLNerF~eL~slL~P~~--~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~E 150 (236)
.|+..||+||++||+.|.+|+++| |.. ..|++|++||..||+||++|+.+++.|..+...|..+...|+..
T Consensus 4 ~Hn~~Er~RR~~in~~f~~L~~ll-P~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~L~~~~~~L~~~ 76 (79)
T d1nlwa_ 4 THNEMEKNRRAHLRLSLEKLKGLV-PLGPDSSRHTTLSLLTKAKLHIKKLEDSDRKAVHQIDQLQREQRHLKRQ 76 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSS-CCCSSSCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999999 642 35899999999999999999999988888777777666665543
No 4
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=4.8e-16 Score=115.44 Aligned_cols=75 Identities=27% Similarity=0.403 Sum_probs=61.9
Q ss_pred cchhHHHHHHHHHHHhHHHHhhhcCCCC--CCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 026599 79 SKACREKLRRDRLNDKFVELASILEPGR--PPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNEL 154 (236)
Q Consensus 79 ~ka~rER~RRdkLNerF~eL~slL~P~~--~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~EknEL 154 (236)
.|+.+||+||++||+.|.+|+++| |+. ..|++|++||..||+||+.|+.++++|+.+.+.|..+...|..+.++|
T Consensus 9 ~Hn~~Er~RR~~in~~f~~Lr~ll-P~~~~~~k~sK~~iL~~A~~yI~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~L 85 (88)
T d1nkpa_ 9 THNVLERQRRNELKRSFFALRDQI-PELENNEKAPKVVILKKATAYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC-GGGTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 599999999999999999999999 643 258999999999999999999999888877666665555555544443
No 5
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.55 E-value=2.2e-15 Score=106.03 Aligned_cols=56 Identities=29% Similarity=0.451 Sum_probs=51.1
Q ss_pred HHHHHHhHHHHhhhcCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 026599 88 RDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKI 144 (236)
Q Consensus 88 RdkLNerF~eL~slL~P~~~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L~eei 144 (236)
|++||++|.+|+++| |+..+|+|||+||.+||+||+.|+.+++.|++++..|..+.
T Consensus 1 R~~in~~f~~L~~lv-P~~~~K~~Ka~iL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~ 56 (61)
T d1uklc_ 1 RSSINDKIIELKDLV-MGTDAKMHKSGVLRKAIDYIKYLQQVNHKLRQENMVLKLAN 56 (61)
T ss_dssp CCCHHHHHHHHHHHH-SCSSCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhC-CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678999999999999 87657999999999999999999999999999888887653
No 6
>d1a0aa_ a.38.1.1 (A:) Pho4 B/HLH domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.44 E-value=3.2e-14 Score=100.25 Aligned_cols=52 Identities=31% Similarity=0.441 Sum_probs=46.7
Q ss_pred CcchhHHHHHHHHHHHhHHHHhhhcCCC------CCCCCchhhhHHHHHHHHHHHHHHH
Q 026599 78 SSKACREKLRRDRLNDKFVELASILEPG------RPPKTDKAAILIDAVRMVTQLRSEA 130 (236)
Q Consensus 78 ~~ka~rER~RRdkLNerF~eL~slL~P~------~~~K~DKAsIL~dAI~ylkqLr~qv 130 (236)
..|+..||+||++||+.|.+|+++| |+ ...|++|++||..||+||++|++++
T Consensus 4 ~~H~~~Er~RR~~in~~~~~L~~ll-P~~~~~~~~~~k~sKa~iL~~Av~yI~~Lq~~v 61 (63)
T d1a0aa_ 4 ESHKHAEQARRNRLAVALHELASLI-PAEWKQQNVSAAPSKATTVEAACRYIRHLQQNG 61 (63)
T ss_dssp TGGGGGTHHHHHHHHHHHHHHHHTS-CHHHHTSSCCCCSCTTHHHHHHHHHHHHHHTCS
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHC-CCcccccCCcccccHHHHHHHHHHHHHHHHHhh
Confidence 4699999999999999999999999 62 2369999999999999999998764
No 7
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.37 E-value=1.5e-13 Score=98.51 Aligned_cols=53 Identities=25% Similarity=0.407 Sum_probs=47.4
Q ss_pred CcchhHHHHHHHHHHHhHHHHhhhcCCCCC-CCCchhhhHHHHHHHHHHHHHHHH
Q 026599 78 SSKACREKLRRDRLNDKFVELASILEPGRP-PKTDKAAILIDAVRMVTQLRSEAQ 131 (236)
Q Consensus 78 ~~ka~rER~RRdkLNerF~eL~slL~P~~~-~K~DKAsIL~dAI~ylkqLr~qv~ 131 (236)
..|+.+||+||++||+.|.+|+++| |+.+ .|+||++||..||+||+.|+..++
T Consensus 14 ~~hn~~Er~Rr~~in~~~~~L~~ll-P~~~~~k~sK~~iL~~Ai~YI~~Lq~~l~ 67 (68)
T d1mdya_ 14 KAATMRERRRLSKVNEAFETLKRST-SSNPNQRLPKVEILRNAIRYIEGLQALLR 67 (68)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTS-CSCTTSCCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 4699999999999999999999999 7642 589999999999999999997654
No 8
>d1an4a_ a.38.1.1 (A:) Usf B/HLH domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.31 E-value=4.4e-13 Score=94.83 Aligned_cols=52 Identities=29% Similarity=0.469 Sum_probs=46.3
Q ss_pred CcchhHHHHHHHHHHHhHHHHhhhcCCCC-----CCCCchhhhHHHHHHHHHHHHHHH
Q 026599 78 SSKACREKLRRDRLNDKFVELASILEPGR-----PPKTDKAAILIDAVRMVTQLRSEA 130 (236)
Q Consensus 78 ~~ka~rER~RRdkLNerF~eL~slL~P~~-----~~K~DKAsIL~dAI~ylkqLr~qv 130 (236)
..|+.+||+||++||+.|.+|+++| |.. ..|++|++||..||+||++|+++.
T Consensus 7 ~~H~~~Er~RR~~in~~f~~L~~lv-P~~~~~~~~~k~sK~~iL~~av~yI~~Lq~~~ 63 (65)
T d1an4a_ 7 AQHNEVERRRRDKINNWIVQLSKII-PDSSMESTKSGQSKGGILSKASDYIQELRQSN 63 (65)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHS-CCCCCCSSTTCCCTTTTTTTTHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc-ccccccCCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 4699999999999999999999999 742 349999999999999999998653
No 9
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=88.99 E-value=2.3 Score=30.40 Aligned_cols=53 Identities=23% Similarity=0.391 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026599 123 VTQLRSEAQKLKDSNSSLQEK--------IKELKAEKNELRDEKQRLKAEKEKIEQQLKAM 175 (236)
Q Consensus 123 lkqLr~qv~~Lk~~n~~L~ee--------ik~Lk~EknELrdEk~~Lk~ekekLe~qlk~~ 175 (236)
.++|+.+++.|+.+...+..+ ..+|..+..+|+++...|..+...++.++..+
T Consensus 37 rr~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~ 97 (110)
T d1seta1 37 VQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444433333333 34455555566666666666666666666664
No 10
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=84.84 E-value=3.2 Score=28.20 Aligned_cols=53 Identities=11% Similarity=0.197 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 121 RMVTQLRSEAQKLKDSNSSLQEKIK------ELKAEKNELRDEKQRLKAEKEKIEQQLK 173 (236)
Q Consensus 121 ~ylkqLr~qv~~Lk~~n~~L~eeik------~Lk~EknELrdEk~~Lk~ekekLe~qlk 173 (236)
+||..|+.+...|...+..+...+. .-+..+.+|......+...|...+..+.
T Consensus 3 eYl~~L~~~~~~L~~~i~k~~~~leknP~skK~~nk~~el~~Q~~s~~~ki~Ea~~li~ 61 (65)
T d1lrza1 3 EYIKELNEERDILNKDLNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQE 61 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999888877652 3444445555555555555555555443
No 11
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=84.27 E-value=1.7 Score=31.16 Aligned_cols=56 Identities=20% Similarity=0.281 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHh
Q 026599 120 VRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKN--------ELRDEKQRLKAEKEKIEQQLKAM 175 (236)
Q Consensus 120 I~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~Ekn--------ELrdEk~~Lk~ekekLe~qlk~~ 175 (236)
++.|-+|-.+..+|..+.+.|+.+.+.+..+.. +|..+...|+.++..++.+++.+
T Consensus 27 ld~i~~ld~~rr~l~~~~e~l~~~rN~~sk~i~k~~~~~~~~l~~~~k~lk~~i~~le~~~~~~ 90 (110)
T d1seta1 27 LEALLALDREVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREK 90 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666667777777777777777666654442 33444455666666666666654
No 12
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=72.76 E-value=13 Score=26.15 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 026599 117 IDAVRMVTQLRSEAQKLKDSNSSLQEKIKE 146 (236)
Q Consensus 117 ~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~ 146 (236)
.+.+..+.+|+.+.+.+......|+.+.++
T Consensus 4 qe~~~~~q~lq~el~~~~~q~~~le~q~~E 33 (107)
T d1fxka_ 4 QHQLAQFQQLQQQAQAISVQKQTVEMQINE 33 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555555544444333
No 13
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.25 E-value=4.7 Score=27.65 Aligned_cols=30 Identities=23% Similarity=0.471 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 145 KELKAEKNELRDEKQRLKAEKEKIEQQLKA 174 (236)
Q Consensus 145 k~Lk~EknELrdEk~~Lk~ekekLe~qlk~ 174 (236)
+.|+.+..+|..++..|+.+.+.|..+|..
T Consensus 55 ~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 84 (88)
T d1nkpa_ 55 LSVQAEEQKLISEEDLLRKRREQLKHKLEQ 84 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444443
No 14
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=71.43 E-value=4.8 Score=29.10 Aligned_cols=33 Identities=12% Similarity=0.296 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 026599 123 VTQLRSEAQKLKDSNSSLQEKIKELKAEKNELR 155 (236)
Q Consensus 123 lkqLr~qv~~Lk~~n~~L~eeik~Lk~EknELr 155 (236)
|.+|..+++.|+++...|+.++..|.....|+.
T Consensus 3 L~eL~~~~~~l~~~l~~l~~~i~~l~~~~~e~~ 35 (133)
T d1fxkc_ 3 LAEIVAQLNIYQSQVELIQQQMEAVRATISELE 35 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666666666666665555543
No 15
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=69.85 E-value=7.1 Score=28.11 Aligned_cols=36 Identities=17% Similarity=0.310 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 026599 116 LIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNEL 154 (236)
Q Consensus 116 L~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~EknEL 154 (236)
+.+|++|++ .+++.|+...+.|.++++.++....++
T Consensus 86 ~~eA~~~l~---~ri~~l~~~~~~l~~~~~~~~~~i~~l 121 (133)
T d1fxkc_ 86 FEDAMESIK---SQKNELESTLQKMGENLRAITDIMMKL 121 (133)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357777644 455555555544444444444444433
No 16
>d1t3ua_ d.244.1.1 (A:) ZapA homologue PA5227 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=67.36 E-value=14 Score=24.97 Aligned_cols=57 Identities=25% Similarity=0.348 Sum_probs=33.0
Q ss_pred HHHHHHhHHHHhhhcCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 026599 88 RDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELK 148 (236)
Q Consensus 88 RdkLNerF~eL~slL~P~~~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk 148 (236)
-+.+|+++.+++.-. |.. -.++..|| -|+.+-.+|...-++++.....+++.+..|.
T Consensus 27 A~~ln~k~~~l~~~~-~~~--~~~~~lvm-aaLnla~e~~~~~~~~~~~~~~~~~~i~~L~ 83 (92)
T d1t3ua_ 27 ARYLDGKMREIRSSG-KVI--GADRVAVM-AALNITHDLLHRKERLDQESSSTRERVRELL 83 (92)
T ss_dssp HHHHHHHHHHHHTTT-CSC--SHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-CCC--CHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999877 543 34444443 3555555555544444444444444444444
No 17
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I, dispensable insert domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=66.75 E-value=6.9 Score=27.22 Aligned_cols=53 Identities=21% Similarity=0.355 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHhh
Q 026599 124 TQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQ-----RLKAEKEKIEQQLKAMS 176 (236)
Q Consensus 124 kqLr~qv~~Lk~~n~~L~eeik~Lk~EknELrdEk~-----~Lk~ekekLe~qlk~~~ 176 (236)
..|++.+..-+..+.....+++.++.+.....+++. ..+...++|+.||.-+.
T Consensus 5 enLq~KI~~Kk~qi~~a~~e~K~ak~d~k~~~~~k~k~~~ekKkK~leRL~EQL~KLe 62 (72)
T d1k4ta1 5 MNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLE 62 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346666666666666666666666665554444443 35667788888887654
No 18
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=62.86 E-value=17 Score=31.16 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=27.6
Q ss_pred HHHHHhHHHHhhhc-CCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhH
Q 026599 89 DRLNDKFVELASIL-EPGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSL 140 (236)
Q Consensus 89 dkLNerF~eL~slL-~P~~~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L 140 (236)
+.+.++|.+|-..+ +|+.-...+|+.-|..-+..|+.+-...++|+...+.+
T Consensus 25 d~kk~Rl~ELE~~lsdP~fW~D~~kAqkl~KE~s~L~~iVe~~~~l~~~leDl 77 (362)
T d1gqea_ 25 DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDV 77 (362)
T ss_dssp HHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCChhhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666666644 34432244566656555555555555555555444433
No 19
>d2p90a1 c.56.8.1 (A:6-274) Hypothetical protein Cgl1923 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=61.29 E-value=5.5 Score=32.19 Aligned_cols=42 Identities=17% Similarity=0.206 Sum_probs=31.8
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 133 LKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKA 174 (236)
Q Consensus 133 Lk~~n~~L~eeik~Lk~EknELrdEk~~Lk~ekekLe~qlk~ 174 (236)
|+-....|.++..+...+.+++.+++..++.=+++||++..+
T Consensus 222 l~id~~~L~e~Ae~~e~~i~~l~e~~~e~~~~v~~LE~~yD~ 263 (269)
T d2p90a1 222 LNLPLLALERDAEKVHRQLMEQTEESSEIQRVVGALEQQYDS 263 (269)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHhHhh
Confidence 445556677777777777788888888888888888888765
No 20
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.01 E-value=8.3 Score=26.03 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 145 KELKAEKNELRDEKQRLKAEKEKIEQQLKA 174 (236)
Q Consensus 145 k~Lk~EknELrdEk~~Lk~ekekLe~qlk~ 174 (236)
+.|..+...|.+++..|+.+.+.|+.+|..
T Consensus 50 ~~L~~~~~~l~~~~~~l~~~~~~L~~~l~~ 79 (83)
T d1nkpb_ 50 QYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444445555555555555556655554
No 21
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.47 E-value=9.9 Score=27.44 Aligned_cols=33 Identities=15% Similarity=0.252 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 026599 123 VTQLRSEAQKLKDSNSSLQEKIKELKAEKNELR 155 (236)
Q Consensus 123 lkqLr~qv~~Lk~~n~~L~eeik~Lk~EknELr 155 (236)
+..|+++++.|..+-..|.+-|+.+.....+|.
T Consensus 3 ~~~L~~El~~L~~~E~~LD~li~~~~~~L~~lt 35 (101)
T d2azeb1 3 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLS 35 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 456667777776666666666666665555554
No 22
>d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]}
Probab=48.64 E-value=43 Score=24.13 Aligned_cols=20 Identities=25% Similarity=0.179 Sum_probs=16.2
Q ss_pred HHHHHHHhHHHHhhhcCCCC
Q 026599 87 RRDRLNDKFVELASILEPGR 106 (236)
Q Consensus 87 RRdkLNerF~eL~slL~P~~ 106 (236)
.++.+|....+|+.-|.|-.
T Consensus 46 ~~~~l~~~~~~l~~~l~p~~ 65 (144)
T d1gs9a_ 46 TMKELKAYKSELEEQLTPVA 65 (144)
T ss_dssp HHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 67788888889999887754
No 23
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=47.61 E-value=19 Score=25.16 Aligned_cols=36 Identities=8% Similarity=0.244 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 026599 120 VRMVTQLRSEAQKLKDSNSSLQEKIKELKAEKNELR 155 (236)
Q Consensus 120 I~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~EknELr 155 (236)
-+.+..|..+++.|+.+...|...++.+..+.++++
T Consensus 64 ~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~ 99 (107)
T d1fxka_ 64 DELTEELQEKLETLQLREKTIERQEERVMKKLQEMQ 99 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444445555555555555545444444444444
No 24
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.02 E-value=30 Score=22.76 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 146 ELKAEKNELRDEKQRLKAEKEKIEQQL 172 (236)
Q Consensus 146 ~Lk~EknELrdEk~~Lk~ekekLe~ql 172 (236)
.|..+..++..++..|+.+...|..+|
T Consensus 51 ~L~~~~~~l~~~~~~L~~~~~~L~~~l 77 (79)
T d1nlwa_ 51 KLEDSDRKAVHQIDQLQREQRHLKRQL 77 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333344444444444444444443
No 25
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=44.38 E-value=27 Score=22.49 Aligned_cols=21 Identities=14% Similarity=0.241 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 026599 155 RDEKQRLKAEKEKIEQQLKAM 175 (236)
Q Consensus 155 rdEk~~Lk~ekekLe~qlk~~ 175 (236)
++....+..++++++..|..+
T Consensus 45 k~kl~~~~~~~~~l~~~l~~L 65 (66)
T d1ivsa1 45 EARLKENLEQAERIREALSQI 65 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 334456677777887777654
No 26
>d1s35a2 a.7.1.1 (A:1169-1273) Spectrin beta chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.76 E-value=46 Score=21.82 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 026599 123 VTQLRSEAQKLKDSNSSLQEKIKELKAEKNEL 154 (236)
Q Consensus 123 lkqLr~qv~~Lk~~n~~L~eeik~Lk~EknEL 154 (236)
+..|..+.+.|+.+....+..+..|....++|
T Consensus 35 v~~l~k~h~~l~~~l~~~~~~v~~l~~~a~~L 66 (105)
T d1s35a2 35 AEAGIRKFEDFLGSMENNRDKVLSPVDSGNKL 66 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34444444444444444444444444444433
No 27
>d1ab4a_ e.11.1.1 (A:) DNA Gyrase A {Escherichia coli [TaxId: 562]}
Probab=37.59 E-value=13 Score=33.02 Aligned_cols=34 Identities=38% Similarity=0.390 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 026599 114 AILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKA 149 (236)
Q Consensus 114 sIL~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~ 149 (236)
+||+..+.-|+.| ++++|+++.++|++++++|+.
T Consensus 428 ~IL~MrL~~LT~l--e~~kL~~E~~~l~~ei~eL~~ 461 (493)
T d1ab4a_ 428 AILDLRLQKLTGL--EHEKLLDEYKELLDQIAELLR 461 (493)
T ss_dssp HHHTCCGGGGSHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444433 346677777777777666653
No 28
>d2b3tb1 e.38.1.1 (B:7-354) Peptide chain release factor 1, RF1 {Escherichia coli [TaxId: 562]}
Probab=36.97 E-value=6.7 Score=33.72 Aligned_cols=84 Identities=14% Similarity=0.267 Sum_probs=30.4
Q ss_pred HHHhHHHHhhhcC-CCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 026599 91 LNDKFVELASILE-PGRPPKTDKAAILIDAVRMVTQLRSEAQKLKDSNSSLQEKIKELKAE---KNELRDEKQRLKAEKE 166 (236)
Q Consensus 91 LNerF~eL~slL~-P~~~~K~DKAsIL~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~Lk~E---knELrdEk~~Lk~eke 166 (236)
|++||.+|...|. |+.-.-.+|+.-|..=...|+.+-...++|+.....|.+ +.+|..+ +....+|...++.+++
T Consensus 2 i~eR~eELe~~LsdPd~w~D~~kaqkLsKE~s~L~~iV~~~~~l~~~~~dlee-l~eL~eD~E~~ela~eEl~el~~~l~ 80 (344)
T d2b3tb1 2 LHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIET-AQMMLDDPEMREMAQDELREAKEKSE 80 (344)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCSSHHHHHHHHHHHHHHHHHHHHHTTCC--------------------------------
T ss_pred hHHHHHHHHHHhhCCcchhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCcchHHHHHHhhhhhhhhhh
Confidence 5677888877763 654334566666655555555555555555544444332 2222211 1223556666677777
Q ss_pred HHHHHHHHh
Q 026599 167 KIEQQLKAM 175 (236)
Q Consensus 167 kLe~qlk~~ 175 (236)
+|+.+++..
T Consensus 81 ~le~~l~~~ 89 (344)
T d2b3tb1 81 QLEQQLQVL 89 (344)
T ss_dssp ----CCCCC
T ss_pred HHHHHHHHH
Confidence 776666543
No 29
>d2clya1 f.52.1.1 (A:79-183) ATP synthase subunit b, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=35.98 E-value=71 Score=22.93 Aligned_cols=58 Identities=17% Similarity=0.191 Sum_probs=38.6
Q ss_pred CCchhhhHHHHHHHHHHHHHHHH------HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 109 KTDKAAILIDAVRMVTQLRSEAQ------KLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKE 166 (236)
Q Consensus 109 K~DKAsIL~dAI~ylkqLr~qv~------~Lk~~n~~L~eeik~Lk~EknELrdEk~~Lk~eke 166 (236)
+.+-..-|.++|+-+++++..++ ..+.+|..|+-|+-+++.-..-..+=|.+|..+++
T Consensus 19 r~~~i~~l~~~Ie~~k~~q~~~~~~~~Lfda~kEnvalqlEa~yrerl~~v~~evK~rLDy~V~ 82 (105)
T d2clya1 19 KQASIKQIQDAIDMEKSQQALVQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHIS 82 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555678888998888887765 44567778888877766554444555566655443
No 30
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.90 E-value=30 Score=24.68 Aligned_cols=17 Identities=24% Similarity=0.243 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHh
Q 026599 159 QRLKAEKEKIEQQLKAM 175 (236)
Q Consensus 159 ~~Lk~ekekLe~qlk~~ 175 (236)
..|...+..++++|+.+
T Consensus 18 ~~LD~li~~~~~~L~~l 34 (101)
T d2azeb1 18 QQLDHLMNICTTQLRLL 34 (101)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 33444444444555544
No 31
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=34.73 E-value=56 Score=27.74 Aligned_cols=20 Identities=25% Similarity=0.292 Sum_probs=12.2
Q ss_pred CCCCCCCchh-hhHHHHHHHHH
Q 026599 104 PGRPPKTDKA-AILIDAVRMVT 124 (236)
Q Consensus 104 P~~~~K~DKA-sIL~dAI~ylk 124 (236)
|++ .=-||| .+|.+|+-+++
T Consensus 225 ~~r-~~PdKAidlld~a~a~~~ 245 (387)
T d1qvra2 225 TER-RLPDKAIDLIDEAAARLR 245 (387)
T ss_dssp CSS-CTHHHHHHHHHHHHHHHH
T ss_pred ccc-cChhhHHHHHHHHHHHHH
Confidence 665 345676 56777776643
No 32
>d3bi1a1 a.48.2.1 (A:594-750) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.58 E-value=28 Score=25.50 Aligned_cols=10 Identities=20% Similarity=0.305 Sum_probs=4.8
Q ss_pred HHHHHHHHHh
Q 026599 166 EKIEQQLKAM 175 (236)
Q Consensus 166 ekLe~qlk~~ 175 (236)
..++.+|..+
T Consensus 69 r~~N~~L~~~ 78 (157)
T d3bi1a1 69 RMMNDQLMFL 78 (157)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555543
No 33
>d1am9a_ a.38.1.1 (A:) SREBP-1a {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.28 E-value=49 Score=21.85 Aligned_cols=24 Identities=25% Similarity=0.415 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 144 IKELKAEKNELRDEKQRLKAEKEK 167 (236)
Q Consensus 144 ik~Lk~EknELrdEk~~Lk~ekek 167 (236)
|+.|..+..+|.+|+..|+.+++.
T Consensus 52 I~~L~~~~~~L~~e~~~lk~~~~~ 75 (80)
T d1am9a_ 52 IRFLQHSNQKLKQENLSLRTAVHK 75 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555555555544444
No 34
>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.46 E-value=73 Score=22.06 Aligned_cols=26 Identities=31% Similarity=0.440 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCC
Q 026599 153 ELRDEKQRLKAEKEKIEQQLKAMSTQ 178 (236)
Q Consensus 153 ELrdEk~~Lk~ekekLe~qlk~~~~~ 178 (236)
+|-||...|-.||..+|.+|+.+..+
T Consensus 50 dLNDeINkL~reK~~WE~rI~eLGGp 75 (80)
T d1x4ta1 50 DLNDEINKLLREKGHWEVRIKELGGP 75 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 34445555667888899999887653
No 35
>d1uklc_ a.38.1.1 (C:) SREBP-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.07 E-value=42 Score=21.25 Aligned_cols=28 Identities=21% Similarity=0.359 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 140 LQEKIKELKAEKNELRDEKQRLKAEKEKIEQQ 171 (236)
Q Consensus 140 L~eeik~Lk~EknELrdEk~~Lk~ekekLe~q 171 (236)
|+.-|+|++ .|+.+...|+.|+..|..+
T Consensus 28 L~~Ai~YI~----~Lq~~~~~L~~e~~~L~~~ 55 (61)
T d1uklc_ 28 LRKAIDYIK----YLQQVNHKLRQENMVLKLA 55 (61)
T ss_dssp HHHHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 444444433 3444444444444444443
No 36
>d2gyqa1 a.25.1.4 (A:1-160) Hypothetical ptotein RPA3308 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=29.73 E-value=73 Score=24.10 Aligned_cols=29 Identities=17% Similarity=0.340 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Q 026599 155 RDEKQRLKAEKEKIEQQLKAMSTQPSFLT 183 (236)
Q Consensus 155 rdEk~~Lk~ekekLe~qlk~~~~~p~~~p 183 (236)
++-...-+.++++|++.|+.+...|.=.+
T Consensus 50 ~~H~~eT~~qi~rLe~i~~~lg~~p~~~~ 78 (160)
T d2gyqa1 50 TSHLEETQKQIERLDQVFKKLGQKPSGVN 78 (160)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCc
Confidence 34445567899999999999998875444
No 37
>d2f23a1 a.2.1.1 (A:3-77) GreA transcript cleavage protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=29.44 E-value=76 Score=21.30 Aligned_cols=51 Identities=18% Similarity=0.304 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 124 TQLRSEAQKLKDSNSSLQEKIKELK--------AEKNELRDEKQRLKAEKEKIEQQLKA 174 (236)
Q Consensus 124 kqLr~qv~~Lk~~n~~L~eeik~Lk--------~EknELrdEk~~Lk~ekekLe~qlk~ 174 (236)
+.|+.+...|+.....+-+.|.+-. .|+..-+++-..+.+.|..|+.+|..
T Consensus 11 ~kL~~EL~~l~~~r~ei~~~I~eAr~~GDl~ENaeY~aAke~q~~~e~rI~eLe~~L~~ 69 (75)
T d2f23a1 11 ERLMQQLERERERLQEATKILQELMESSDDYDDSGLEAAKQEKARIEARIDSLEDILSR 69 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566666665544444444444322 34555566777888888888888864
No 38
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=29.39 E-value=1.4e+02 Score=25.11 Aligned_cols=8 Identities=0% Similarity=0.268 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 026599 162 KAEKEKIE 169 (236)
Q Consensus 162 k~ekekLe 169 (236)
+.+++.+.
T Consensus 319 k~~Le~lr 326 (387)
T d1qvra2 319 QHRLDEVR 326 (387)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 39
>d1ecma_ a.130.1.1 (A:) Chorismate mutase domain of P-protein {Escherichia coli [TaxId: 562]}
Probab=28.39 E-value=41 Score=22.46 Aligned_cols=34 Identities=21% Similarity=0.246 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 026599 123 VTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRD 156 (236)
Q Consensus 123 lkqLr~qv~~Lk~~n~~L~eeik~Lk~EknELrd 156 (236)
|.+||.++.++..+.-.|-.+--.+..+.-+++.
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~R~~l~~~I~~~K~ 36 (91)
T d1ecma_ 3 LLALREKISALDEKLLALLAERRELAVEVGKAKL 36 (91)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888877776666655555555555443
No 40
>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.42 E-value=97 Score=21.86 Aligned_cols=13 Identities=8% Similarity=0.266 Sum_probs=5.8
Q ss_pred HHHHhHHHHhhhc
Q 026599 90 RLNDKFVELASIL 102 (236)
Q Consensus 90 kLNerF~eL~slL 102 (236)
.|+..+..++..+
T Consensus 13 ~I~~~i~~i~~~i 25 (196)
T d1fioa_ 13 QINRDLDKYDHTI 25 (196)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444444
No 41
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=26.98 E-value=10 Score=31.93 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=14.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 139 SLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKA 174 (236)
Q Consensus 139 ~L~eeik~Lk~EknELrdEk~~Lk~ekekLe~qlk~ 174 (236)
+|+.+++.+..|..++++.......+..+|..+|.-
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 42 (368)
T d2ncda_ 7 ELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMD 42 (368)
T ss_dssp GGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 333333333444444433333333344445544444
No 42
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=26.81 E-value=41 Score=24.78 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=9.5
Q ss_pred hHHHHhhhcCCCC
Q 026599 94 KFVELASILEPGR 106 (236)
Q Consensus 94 rF~eL~slL~P~~ 106 (236)
.|..|-+-| |+.
T Consensus 71 qId~LI~sL-P~~ 82 (129)
T d1ykhb1 71 QINKLIDSL-PGV 82 (129)
T ss_dssp HHHHHHHHS-TTT
T ss_pred hHHHHHHhC-CCC
Confidence 588888888 875
No 43
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=26.06 E-value=50 Score=21.08 Aligned_cols=29 Identities=17% Similarity=0.414 Sum_probs=20.7
Q ss_pred HHHHHHHHHH--------HHHHHHhhhhHHHHHHHHH
Q 026599 120 VRMVTQLRSE--------AQKLKDSNSSLQEKIKELK 148 (236)
Q Consensus 120 I~ylkqLr~q--------v~~Lk~~n~~L~eeik~Lk 148 (236)
++.|++||++ -+.|++.+..++.-+..|+
T Consensus 3 ~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~Lr 39 (52)
T d1aipc1 3 MELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLR 39 (52)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5788999887 4567777777776666664
No 44
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.93 E-value=1e+02 Score=23.44 Aligned_cols=41 Identities=22% Similarity=0.221 Sum_probs=27.0
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 129 EAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIE 169 (236)
Q Consensus 129 qv~~Lk~~n~~L~eeik~Lk~EknELrdEk~~Lk~ekekLe 169 (236)
+.+.|+.+...+.+.|+.-+.+..||......+|.=++|-+
T Consensus 3 e~~~Le~E~~~~~erI~~K~~~LqeLi~Q~iafknLV~RN~ 43 (148)
T d2azea1 3 ECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNR 43 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 56667777777777777767666677666666666555543
No 45
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=25.74 E-value=23 Score=29.66 Aligned_cols=47 Identities=11% Similarity=0.187 Sum_probs=27.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 128 SEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKA 174 (236)
Q Consensus 128 ~qv~~Lk~~n~~L~eeik~Lk~EknELrdEk~~Lk~ekekLe~qlk~ 174 (236)
.++++|+..++++..++.+++....+.+-+.-+|..++..|..-|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~gnIkV 49 (368)
T d2ncda_ 3 QRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRV 49 (368)
T ss_dssp SSSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCEEE
Confidence 34455555555555555555544444444445688888887766665
No 46
>d2h9da1 a.130.1.1 (A:1-94) Salicylate biosynthesis protein PchB {Pseudomonas aeruginosa [TaxId: 287]}
Probab=25.51 E-value=49 Score=22.50 Aligned_cols=51 Identities=6% Similarity=0.171 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 123 VTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKA 174 (236)
Q Consensus 123 lkqLr~qv~~Lk~~n~~L~eeik~Lk~EknELrdEk~~Lk~ekekLe~qlk~ 174 (236)
|.+||.++..+..+.-.|..+--.+..+.-+++.++..+ .+-++.+..++.
T Consensus 10 L~~lR~~ID~ID~~i~~LL~~R~~l~~~i~~~K~~~~~v-~d~~Re~~vl~~ 60 (94)
T d2h9da1 10 LADIREAIDRIDLDIVQALGRRMDYVKAASRFKASEAAI-PAPERVAAMLPE 60 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-----------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCC-CcHHHHHHHHHH
Confidence 678888888888888887777666666666665544432 234444444443
No 47
>d1x4ta1 a.2.15.1 (A:7-86) Pre-mRNA-splicing factor ISY1 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.29 E-value=1e+02 Score=21.31 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 026599 141 QEKIKELKAEKNELRDEKQRLKAEKEKI 168 (236)
Q Consensus 141 ~eeik~Lk~EknELrdEk~~Lk~ekekL 168 (236)
+..|++|..|.|.|-.|+..=..+|..|
T Consensus 45 e~~IRdLNDeINkL~reK~~WE~rI~eL 72 (80)
T d1x4ta1 45 EFRIRDLNDEINKLLREKGHWEVRIKEL 72 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3457777777777777777666655443
No 48
>d1cuna2 a.7.1.1 (A:116-219) Spectrin alpha chain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.04 E-value=88 Score=20.22 Aligned_cols=30 Identities=7% Similarity=0.058 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 026599 117 IDAVRMVTQLRSEAQKLKDSNSSLQEKIKE 146 (236)
Q Consensus 117 ~dAI~ylkqLr~qv~~Lk~~n~~L~eeik~ 146 (236)
..-++.++.|+.++...+.....|....+.
T Consensus 33 ~~ll~~h~~~~~ei~~~~~~~~~l~~~g~~ 62 (104)
T d1cuna2 33 QGLLKKHEAFETDFTVHKDRVNDVCANGED 62 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 333445555555555544444444444333
No 49
>d2d8da1 a.130.1.1 (A:3-82) Chorismate mutase domain of P-protein {Thermus thermophilus [TaxId: 274]}
Probab=23.43 E-value=69 Score=20.83 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q 026599 123 VTQLRSEAQKLKDSNSSLQEKIKELKAEKNELRD 156 (236)
Q Consensus 123 lkqLr~qv~~Lk~~n~~L~eeik~Lk~EknELrd 156 (236)
|.+||.++.++..+.-.|-.+--.+..+.-+++.
T Consensus 3 L~~lR~~ID~iD~~i~~Ll~~R~~~~~~i~~~K~ 36 (80)
T d2d8da1 3 IQALRKEVDRVNREILRLLSERGRLVQEIGRLQT 36 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5677777777777766666554444444444443
No 50
>d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]}
Probab=23.39 E-value=65 Score=27.34 Aligned_cols=17 Identities=18% Similarity=0.192 Sum_probs=11.4
Q ss_pred HHHHHhHHHHhhhcCCC
Q 026599 89 DRLNDKFVELASILEPG 105 (236)
Q Consensus 89 dkLNerF~eL~slL~P~ 105 (236)
..|++++..|+..+|.+
T Consensus 9 ~eL~~rl~~Lr~~fDld 25 (362)
T d1gqea_ 9 QDLTERSDVLRGYLDYD 25 (362)
T ss_dssp HHHHHHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHcCHH
Confidence 35667777777777543
No 51
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=22.97 E-value=76 Score=20.46 Aligned_cols=31 Identities=16% Similarity=0.295 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHH--------HHHHHHhhhhHHHHHHHHH
Q 026599 118 DAVRMVTQLRSE--------AQKLKDSNSSLQEKIKELK 148 (236)
Q Consensus 118 dAI~ylkqLr~q--------v~~Lk~~n~~L~eeik~Lk 148 (236)
..++.|++||++ -+.|++.+..++.-+..|+
T Consensus 3 ~s~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~Lr 41 (56)
T d1xb2b1 3 SSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLH 41 (56)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 357889999987 4567777777776666665
No 52
>d1lrza1 a.2.7.4 (A:245-309) Methicillin resistance protein FemA probable tRNA-binding arm {Staphylococcus aureus [TaxId: 1280]}
Probab=22.57 E-value=99 Score=20.27 Aligned_cols=46 Identities=17% Similarity=0.362 Sum_probs=25.3
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026599 129 EAQKLKDSNSSLQEKIKELKAEKNELRDEKQRLKAEKEKIEQQLKAM 175 (236)
Q Consensus 129 qv~~Lk~~n~~L~eeik~Lk~EknELrdEk~~Lk~ekekLe~qlk~~ 175 (236)
-+..|+.+...|..+|..+.....+ +-.+..-+.++..|++|+.+.
T Consensus 4 Yl~~L~~~~~~L~~~i~k~~~~lek-nP~skK~~nk~~el~~Q~~s~ 49 (65)
T d1lrza1 4 YIKELNEERDILNKDLNKALKDIEK-RPENKKAHNKRDNLQQQLDAN 49 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-CTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-CCCcHHHHHHHHHHHHHHHHH
Confidence 3455666666666666555443322 223345566666677776653
No 53
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.80 E-value=1.2e+02 Score=20.89 Aligned_cols=14 Identities=21% Similarity=0.553 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHH
Q 026599 160 RLKAEKEKIEQQLK 173 (236)
Q Consensus 160 ~Lk~ekekLe~qlk 173 (236)
.++..++.|+..++
T Consensus 63 ~ik~~Lk~l~~~~~ 76 (124)
T d1ez3a_ 63 KVRSKLKSIEQSIE 76 (124)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45555555555444
No 54
>d1io1a_ e.32.1.1 (A:) Phase 1 flagellin {Salmonella typhimurium [TaxId: 90371]}
Probab=21.57 E-value=1e+02 Score=23.18 Aligned_cols=19 Identities=11% Similarity=0.219 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 026599 157 EKQRLKAEKEKIEQQLKAM 175 (236)
Q Consensus 157 Ek~~Lk~ekekLe~qlk~~ 175 (236)
+...|..|++.|..||..+
T Consensus 52 dr~ai~~E~~~l~~ei~~i 70 (395)
T d1io1a_ 52 DLDSIQAEITQRLNEIDRV 70 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555554
No 55
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1 {Thermotoga maritima [TaxId: 2336]}
Probab=20.93 E-value=29 Score=29.49 Aligned_cols=21 Identities=19% Similarity=0.298 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhC
Q 026599 157 EKQRLKAEKEKIEQQLKAMST 177 (236)
Q Consensus 157 Ek~~Lk~ekekLe~qlk~~~~ 177 (236)
|...++.+++.++.+|..+..
T Consensus 61 el~~l~~~l~~l~~el~~l~~ 81 (333)
T d1rq0a_ 61 EIEKYEKELDQLYQELLFLLS 81 (333)
T ss_dssp CHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhcccc
Confidence 556778888888888876543
No 56
>d1j1va_ a.4.12.2 (A:) Chromosomal replication initiation factor DnaA C-terminal domain IV {Escherichia coli [TaxId: 562]}
Probab=20.70 E-value=61 Score=22.01 Aligned_cols=37 Identities=27% Similarity=0.423 Sum_probs=22.2
Q ss_pred HHHHHHHhHHHHhhhcCCCCCCCCchhhhHHHHHHHHHHHHHH
Q 026599 87 RRDRLNDKFVELASILEPGRPPKTDKAAILIDAVRMVTQLRSE 129 (236)
Q Consensus 87 RRdkLNerF~eL~slL~P~~~~K~DKAsIL~dAI~ylkqLr~q 129 (236)
=|+.++-.+.+++..+ ...|=++|+. +++-++++..+
T Consensus 41 ~r~~~~~sl~~Ig~~f-----g~rdHsTV~~-a~kki~~~~~~ 77 (94)
T d1j1va_ 41 AKELTNHSLPEIGDAF-----GGRDHTTVLH-ACRKIEQLREE 77 (94)
T ss_dssp HHHHSCCCHHHHHHHT-----TSCCHHHHHH-HHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHh-----CCCCchHHHH-HHHHHHHHHHh
Confidence 4677777888888888 2335555543 55555544333
Done!