Query 026600
Match_columns 236
No_of_seqs 180 out of 1480
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 10:07:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026600.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026600hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0223 Aquaporin (major intri 100.0 6.9E-55 1.5E-59 369.3 20.4 219 2-231 9-235 (238)
2 PLN00184 aquaporin NIP1; Provi 100.0 1.5E-51 3.2E-56 360.5 23.8 224 3-235 53-286 (296)
3 COG0580 GlpF Glycerol uptake f 100.0 3E-50 6.6E-55 340.2 23.6 216 1-222 2-240 (241)
4 KOG0224 Aquaporin (major intri 100.0 1.3E-51 2.8E-56 352.5 10.9 218 3-225 31-278 (316)
5 PRK05420 aquaporin Z; Provisio 100.0 7.5E-49 1.6E-53 333.9 25.0 214 4-224 2-230 (231)
6 PLN00026 aquaporin NIP; Provi 100.0 4.2E-49 9.2E-54 344.5 23.1 223 2-233 69-293 (298)
7 PLN00182 putative aquaporin NI 100.0 4.6E-48 9.9E-53 336.6 24.7 212 2-222 40-254 (283)
8 PF00230 MIP: Major intrinsic 100.0 1.2E-48 2.5E-53 332.3 20.3 208 2-217 6-227 (227)
9 PTZ00016 aquaglyceroporin; Pro 100.0 5.7E-48 1.2E-52 338.5 24.0 217 3-225 49-293 (294)
10 PLN00167 aquaporin TIP5; Provi 100.0 2.7E-47 5.8E-52 328.3 24.4 223 2-232 20-250 (256)
11 PLN00166 aquaporin TIP2; Provi 100.0 4.5E-47 9.8E-52 326.0 25.4 216 3-226 17-241 (250)
12 PLN00027 aquaporin TIP; Provis 100.0 5E-47 1.1E-51 326.6 25.1 215 3-225 19-242 (252)
13 PLN00183 putative aquaporin NI 100.0 8.7E-45 1.9E-49 314.9 23.9 214 3-226 44-260 (274)
14 cd00333 MIP Major intrinsic pr 100.0 6.4E-44 1.4E-48 303.6 21.6 210 5-220 1-228 (228)
15 TIGR00861 MIP MIP family chann 100.0 2.7E-41 5.8E-46 285.4 21.4 203 9-217 1-216 (216)
16 PLN00026 aquaporin NIP; Provi 99.6 9.5E-16 2.1E-20 134.6 9.9 107 116-224 63-174 (298)
17 PLN00184 aquaporin NIP1; Provi 99.6 2E-15 4.4E-20 132.7 10.3 104 120-225 50-158 (296)
18 PLN00183 putative aquaporin NI 99.5 2.8E-14 6E-19 124.3 10.2 104 119-224 40-148 (274)
19 PLN00166 aquaporin TIP2; Provi 99.5 2.3E-14 5.1E-19 123.4 9.0 101 121-223 15-125 (250)
20 cd00333 MIP Major intrinsic pr 99.5 4.9E-14 1.1E-18 120.0 7.5 103 125-229 1-109 (228)
21 PLN00167 aquaporin TIP5; Provi 99.5 1.3E-13 2.7E-18 119.3 9.9 102 120-223 18-129 (256)
22 PLN00027 aquaporin TIP; Provis 99.5 2.4E-13 5.2E-18 117.4 9.7 100 122-223 18-127 (252)
23 PLN00182 putative aquaporin NI 99.5 2.3E-13 4.9E-18 119.0 9.4 102 120-223 38-144 (283)
24 PTZ00016 aquaglyceroporin; Pro 99.5 2.1E-13 4.5E-18 120.1 8.6 103 122-226 48-155 (294)
25 PRK05420 aquaporin Z; Provisio 99.4 5.4E-13 1.2E-17 113.8 9.9 98 124-223 2-105 (231)
26 TIGR00861 MIP MIP family chann 99.4 2.2E-12 4.8E-17 109.0 7.9 95 129-225 1-105 (216)
27 COG0580 GlpF Glycerol uptake f 99.2 3.4E-11 7.5E-16 102.5 8.6 106 122-229 3-116 (241)
28 KOG0224 Aquaporin (major intri 99.1 2.1E-10 4.5E-15 99.4 7.6 101 122-224 30-136 (316)
29 KOG0223 Aquaporin (major intri 99.1 8.6E-10 1.9E-14 94.1 9.2 104 119-224 6-114 (238)
30 PF00230 MIP: Major intrinsic 99.0 5E-10 1.1E-14 95.1 5.5 102 121-224 5-117 (227)
31 PRK11562 nitrite transporter N 84.7 26 0.00057 30.6 19.9 160 68-235 83-263 (268)
32 PF04632 FUSC: Fusaric acid re 84.3 42 0.0009 32.6 17.5 148 45-225 346-494 (650)
33 PF01384 PHO4: Phosphate trans 83.5 30 0.00066 31.0 12.5 138 70-225 7-149 (326)
34 COG0306 PitA Phosphate/sulphat 70.5 82 0.0018 28.4 13.1 142 64-226 20-163 (326)
35 PRK15086 ethanolamine utilizat 52.4 14 0.0003 33.7 3.0 59 175-233 304-368 (372)
36 PF03033 Glyco_transf_28: Glyc 49.4 5 0.00011 30.4 -0.3 18 64-81 9-26 (139)
37 KOG1330 Sugar transporter/spin 48.1 17 0.00036 34.5 2.9 31 198-228 187-217 (493)
38 PF03092 BT1: BT1 family; Int 36.7 77 0.0017 29.3 5.5 31 195-226 387-417 (433)
39 PF09163 Form-deh_trans: Forma 31.2 55 0.0012 20.5 2.4 26 205-230 18-43 (44)
40 PRK12446 undecaprenyldiphospho 26.8 28 0.0006 31.4 0.8 20 59-79 8-27 (352)
41 PRK04125 murein hydrolase regu 22.2 65 0.0014 25.4 2.0 31 203-233 99-129 (141)
42 PRK10631 p-hydroxybenzoic acid 22.0 7.9E+02 0.017 24.4 16.6 126 64-225 380-505 (652)
43 PRK10805 formate transporter; 21.8 5.5E+02 0.012 22.6 20.4 76 68-146 93-184 (285)
44 PF10710 DUF2512: Protein of u 21.3 4E+02 0.0087 20.7 8.7 65 123-190 3-72 (136)
45 PRK11404 putative PTS system 21.2 50 0.0011 31.4 1.3 33 198-230 440-472 (482)
46 PRK14213 camphor resistance pr 21.1 1.9E+02 0.004 21.9 4.2 28 84-111 91-118 (118)
47 TIGR02587 putative integral me 20.9 4.9E+02 0.011 22.9 7.2 65 72-136 84-153 (271)
48 PRK09765 PTS system 2-O-a-mann 20.9 8.1E+02 0.018 24.1 11.2 45 50-109 350-394 (631)
49 COG2116 FocA Formate/nitrite f 20.4 5.9E+02 0.013 22.3 19.0 154 68-228 89-264 (265)
50 PRK10290 superoxide dismutase; 20.3 41 0.00089 27.5 0.5 9 62-70 88-96 (173)
No 1
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.9e-55 Score=369.27 Aligned_cols=219 Identities=24% Similarity=0.372 Sum_probs=191.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+.+|++++||+||++++|+||++.....+..+.... .++++++|+++. ..++++|++| |||+|||||+++++.|++
T Consensus 9 ~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l-~~ial~~Gl~v~--v~i~~~g~iS-GaH~NPAVT~a~~~~~~i 84 (238)
T KOG0223|consen 9 SFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGL-LGIALAFGLAVF--VLVYSTGHIS-GAHFNPAVTLAFAVGGKI 84 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchh-HHHHHHHHHHHH--HHHhhhcccc-ccccCHHHHHHHHHhCCC
Confidence 568999999999999999999988754331111111 268899999984 4489999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-------CCCCCCCcchHHHHHHHHHHHHHHHHHHHh-hhccCCCCcc
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQI-------GRGPSLNVGIHHGALTEGLLTFAIVTISLG-LARKIPGSFY 153 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~-~~~~~~~~~~ 153 (236)
++.+++.|+.+|++|+++|+.+++.+.|++ ...++++.+.+|+++.|++.||.|+++++. .+|+|+ +.
T Consensus 85 --sl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~E~ilTf~Lv~~v~~~a~d~~~--~~ 160 (238)
T KOG0223|consen 85 --SLFRAVAYIVAQLLGAIAGAALLKVVTPGQYNRKGLGLTGLAPGLSTGQGLVIEIILTFILVFTVFATATDPRR--SE 160 (238)
T ss_pred --cHHHhHHHHHHHHHHHHHHHHHHheecCcccccCCcceeccCCCCCcchhHHHHHHHHHHHhheeEEEeecCCC--cc
Confidence 999999999999999999999999999873 236778889999999999999999999999 555443 37
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcccccccC
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDS 231 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~~~ 231 (236)
+.|+.||+++.+.+++.+++||++|||||+|||+++.+ .|++|||||+||++|+++++++|++++.|+.+|++++
T Consensus 161 ~a~l~IG~~v~~~~l~~g~~TG~sMNPArSfGpAvv~~---~w~~hwiYwvgP~~Ga~~a~~~y~~v~~~~~~~~~~~ 235 (238)
T KOG0223|consen 161 LAPLAIGFSVGLNILAAGPFTGASMNPARSFGPAVVYG---SWDDHWIYWVGPLLGAILAALIYRLVFIPDESEPTKS 235 (238)
T ss_pred cHHHHHHHHHHHHHHeecCcCcCccCcHHHhhHHHHhc---CCCcEEEEEhhHHHHHHHHHHHHHHhccCccccccCc
Confidence 89999999999999999999999999999999999998 6999999999999999999999999999994444433
No 2
>PLN00184 aquaporin NIP1; Provisional
Probab=100.00 E-value=1.5e-51 Score=360.51 Aligned_cols=224 Identities=21% Similarity=0.239 Sum_probs=187.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCCC
Q 026600 3 GIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDFS 82 (236)
Q Consensus 3 ~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~~ 82 (236)
.+|++++||+|||+|+|++|++++... ..+.+.....++++||+++ +..+++++++| |||+|||||+++++.|++
T Consensus 53 ~~~~~~aEfiGTflLvf~g~g~~~~~~-~~~~~~~~~~iai~~Gl~v--~~~i~~~g~iS-GaH~NPAVTla~al~g~~- 127 (296)
T PLN00184 53 FLQKLIAEVLGTYFLVFTGCASVVVNM-QNDNVVTLPGIAIVWGLTI--MVLIYSLGHIS-GAHINPAVTIAFASCGRF- 127 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc-cCCCccccHHHHHHHHHHH--HHHHHHhcCCC-ccccCHHHHHHHHHhCCC-
Confidence 579999999999999999998766421 1111111226788889887 44488999999 999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC----------CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCCCc
Q 026600 83 NFLFTVGARIPAQVIGSITGVRFILDTFPQIG----------RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSF 152 (236)
Q Consensus 83 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~----------~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~ 152 (236)
+|.+.+.|+++|++||++|+++++.+++... ....+..+..++|+.|+++|++|+++++.+.+++++..
T Consensus 128 -~~~~~~~YiiaQllGA~lga~~~~~l~~~~~~~~~~~~~~~~~t~p~~s~~~af~~E~i~TfvLv~~il~~~~~~~~~~ 206 (296)
T PLN00184 128 -PLKQVPAYVISQVIGSTLAAATLRLLFGLDHDVCSGKHDVFIGSSPVGSDLQAFVMEFIVTFYLMFIISGVATDNRAIG 206 (296)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhccccccceeeccCcCCcHHHHHHHHHHHHHHHHHHHHheeccCcCCC
Confidence 9999999999999999999999999985321 11223347899999999999999999999876543344
Q ss_pred cchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcccccccCc
Q 026600 153 YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSK 232 (236)
Q Consensus 153 ~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~~~k 232 (236)
...|+.||+++.+.++..+++||++||||||||||++.+ .|+++||||+||++|+++++++|++++.++...+|..|
T Consensus 207 ~~~~l~IG~~v~~~~~~~g~~TG~smNPAR~~GPal~~~---~~~~~WVy~vgPilGa~laal~y~~l~~~~~~~~~~~~ 283 (296)
T PLN00184 207 ELAGLAIGSTVLLNVLIAAPVSSASMNPGRSLGPAMVYG---CYKGIWIYIVAPTLGAIAGAWVYNTVRYTDKPLREITK 283 (296)
T ss_pred cchHHHHHHHHHHHHHHhcccCccccCchhhHHHHHHhh---cccccchHHhHHHHHHHHHHHHHHHHhcCCCcchhhcc
Confidence 578999999999999999999999999999999999987 68899999999999999999999999887766666555
Q ss_pred ccC
Q 026600 233 SKS 235 (236)
Q Consensus 233 ~~~ 235 (236)
+.+
T Consensus 284 ~~~ 286 (296)
T PLN00184 284 SGS 286 (296)
T ss_pred chH
Confidence 543
No 3
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-50 Score=340.16 Aligned_cols=216 Identities=20% Similarity=0.237 Sum_probs=181.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHc
Q 026600 1 MAGIRLVVSDFILSFMWVWQSVLIKIFVY--KVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGIS 78 (236)
Q Consensus 1 ~~~~r~~~aEfigT~~lv~~g~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~ 78 (236)
++..|++++||+||++|+++|+++++++. +..+.+.....++++||+++ ++.+|+++++| |+|+|||||+++++.
T Consensus 2 ~~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V--~~~iy~~g~iS-GaHlNPAVTi~la~~ 78 (241)
T COG0580 2 TTLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGV--LVAIYAFGGIS-GAHLNPAVTIALAVR 78 (241)
T ss_pred ccHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHH--HHHHHhccCcC-ccccChHHHHHHHHh
Confidence 35689999999999999999999988753 21111111126889999998 44589999999 999999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-----------C----CCCCCCcchHHHHHHHHHHHHHHHHHHHh
Q 026600 79 GDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-----------G----RGPSLNVGIHHGALTEGLLTFAIVTISLG 143 (236)
Q Consensus 79 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-----------~----~~~~~~~~~~~~~~~E~~~T~~Lv~~il~ 143 (236)
|++ ||++++.|+++|++||++|+.++|.+++++ + ..|.. .+..++|+.|+++|++|++++++
T Consensus 79 g~f--p~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~t~p~~-~~~~~~fl~E~v~T~~L~~~Ila 155 (241)
T COG0580 79 GRF--PWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETEGDPLASLGAFSTSPGG-YSLGQAFLIEFVGTFVLVLGILA 155 (241)
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhcCCchhhccccccCCCc-ccHHHHHHHHHHHHHHHHHHHHH
Confidence 999 999999999999999999999999998543 1 12332 26789999999999999999999
Q ss_pred hhccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhc---CC---CCCCCcceehhhhhHHHHHHHHHHH
Q 026600 144 LARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR---GD---HITKEHILVYWLAPIQATVIALWLF 217 (236)
Q Consensus 144 ~~~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~---~~---~~~~~~~wvy~v~P~lGa~~a~~~y 217 (236)
++|+++.++.+.|+.||+.++.++++.++.||.++|||||+|||+.. ++ ..+++|+|+||++|++|+++++++|
T Consensus 156 ~~~~~~~~~~~apl~iGllv~~i~~s~g~~TG~aiNPARdlGprl~~~~~g~~~~~g~~~y~wipvigpiiGa~lg~~~~ 235 (241)
T COG0580 156 LTDDGNANAGFAPLAIGLLVTAIGLSLGPTTGTAINPARDLGPRLAHSLAGWAANKGDSSYFWIPVIGPIVGAILGALLY 235 (241)
T ss_pred hhccCcccccchHHHHHHHHHHHHHHhcCCCCCccChHHHHHHHHHHHhcCcccCCCCCCeEeeeehHHHHHHHHHHHHH
Confidence 98754334459999999999999999999999999999999999944 31 1122689999999999999999999
Q ss_pred HHhcC
Q 026600 218 KLVVR 222 (236)
Q Consensus 218 ~~l~~ 222 (236)
+.++.
T Consensus 236 ~~~~~ 240 (241)
T COG0580 236 KLLLG 240 (241)
T ss_pred HHHcc
Confidence 98764
No 4
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-51 Score=352.46 Aligned_cols=218 Identities=18% Similarity=0.234 Sum_probs=186.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCCC
Q 026600 3 GIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDFS 82 (236)
Q Consensus 3 ~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~~ 82 (236)
+.|+++|||+||++|+++|++++++..-..+......++.++||+++ ++.+++.|++| |||+|||||+++++.||+
T Consensus 31 l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av--~~gVyvag~iS-GgHlNPAVS~a~~~~g~~- 106 (316)
T KOG0224|consen 31 LLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAV--MMGVYVAGRIS-GGHLNPAVSLAMCILGRL- 106 (316)
T ss_pred HHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHH--HHHHHhhcccc-ccccCHHHHHHHHHhcCC-
Confidence 57999999999999999999998874222122221226788899887 66789999999 999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcCCC---------------------CCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 026600 83 NFLFTVGARIPAQVIGSITGVRFILDTFPQI---------------------GRGPSLNVGIHHGALTEGLLTFAIVTIS 141 (236)
Q Consensus 83 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~E~~~T~~Lv~~i 141 (236)
||+|.+.|+++|++||++|++.+|.+|.+. ...|.++++.+++|+.|+++|.+|+.++
T Consensus 107 -p~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~i~~f~Gg~~~vtgp~aTAgiFaTyP~p~ls~~n~F~DqfigTa~L~~~l 185 (316)
T KOG0224|consen 107 -PWKKFPVYVLAQFIGAFLGAATVYGLYYDAINEFDGGNRTVTGPKATAGIFATYPAPHLSLWNGFFDQFIGTAMLVLCL 185 (316)
T ss_pred -ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEecCCccceEEEeecCchHhhhhHHHHHHHHHHHHHHhhe
Confidence 999999999999999999999999998532 1268889999999999999999999999
Q ss_pred HhhhccCCC-CccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhc---CC--CC---CCCcceehhhhhHHHHHH
Q 026600 142 LGLARKIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR---GD--HI---TKEHILVYWLAPIQATVI 212 (236)
Q Consensus 142 l~~~~~~~~-~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~---~~--~~---~~~~~wvy~v~P~lGa~~ 212 (236)
++++|+++. .+.+.|+.+|+.+.++.++.+.+||..+|||||||||++. |+ +. .-.++|++|++|++|+++
T Consensus 186 ~aI~D~rN~~p~g~~p~~iG~lv~~Ig~s~G~N~GyaiNPARDlgPRlF~~~aGyG~~vF~~~~~~~WvPivgPl~Gai~ 265 (316)
T KOG0224|consen 186 FAITDKRNPIPTGLHPLVIGILVVAIGMSLGYNTGYAINPARDLGPRLFTSIAGYGPEVFSAGHNWWWVPIVGPLIGAIL 265 (316)
T ss_pred eEEecCCCCCCcchhHHHHHHHHHHHHHHhhcccCcccCcccccchHHHHHHHhcchhhcccCCceeeeeehhhhhhhhh
Confidence 999998653 4568999999999999999999999999999999999984 21 11 114679999999999999
Q ss_pred HHHHHHHhcCCcc
Q 026600 213 ALWLFKLVVRPLA 225 (236)
Q Consensus 213 a~~~y~~l~~~~~ 225 (236)
++++|++++.-+.
T Consensus 266 G~~iY~~~Ig~h~ 278 (316)
T KOG0224|consen 266 GGWIYDFFIGFHI 278 (316)
T ss_pred hhhhheeeeeccC
Confidence 9999999875554
No 5
>PRK05420 aquaporin Z; Provisional
Probab=100.00 E-value=7.5e-49 Score=333.93 Aligned_cols=214 Identities=20% Similarity=0.302 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCCCc
Q 026600 4 IRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDFSN 83 (236)
Q Consensus 4 ~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~~~ 83 (236)
+|++++||+||++|++++++++...++..+.+.....++++||+++.+ .+++++++| |+|+|||||+++++.|++
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~--~i~~~g~iS-G~h~NPAvtl~~~~~~~i-- 76 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLT--MAYAVGHIS-GGHFNPAVSVGLWAGGRF-- 76 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHH--HHHHHhCcc-cccCCHHHHHHHHHhCCC--
Confidence 799999999999999999997654222221111112567888888743 478999999 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC--------C------CCC-CCcchHHHHHHHHHHHHHHHHHHHhhhccC
Q 026600 84 FLFTVGARIPAQVIGSITGVRFILDTFPQIG--------R------GPS-LNVGIHHGALTEGLLTFAIVTISLGLARKI 148 (236)
Q Consensus 84 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------~------~~~-~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~ 148 (236)
+|++.+.|+++|++|+++|+.+++.+++++. . ... ...+..++++.|+++|++|+++++...|++
T Consensus 77 ~~~~~~~Y~~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~iLv~~i~~~~~~~ 156 (231)
T PRK05420 77 PAKELVPYIIAQVVGGIAAAAVLYLIASGKAGFDLAGSGFASNGYGEHSPGGYSLLAALVCEVVLTAFFLLVILGATDKR 156 (231)
T ss_pred CHHHhHHHHHHHHHHHHHHHHHHHHHhCCccccccccccccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998875420 0 001 134678999999999999999999998865
Q ss_pred CCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 149 PGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 149 ~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
+ .+...|+.||+.+.+..+.++++||++|||||||||++++++ ..|+++|+||++|++|+++++++|+++++++
T Consensus 157 ~-~~~~~p~~iGl~v~~~~~~~~~~TG~s~NPAR~~gpal~~g~-~~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~ 230 (231)
T PRK05420 157 A-PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGVALFVGG-WALEQLWLFWVAPIVGAIIGGLIYRLLLEKD 230 (231)
T ss_pred C-CCcchHHHHHHHHHHHHHHhhccCCCccCcHHHHHHHHHhCC-CCccceEEeehHHHHHHHHHHHHHHHHhccC
Confidence 3 345789999999999999999999999999999999999862 2457899999999999999999999986553
No 6
>PLN00026 aquaporin NIP; Provisional
Probab=100.00 E-value=4.2e-49 Score=344.47 Aligned_cols=223 Identities=19% Similarity=0.211 Sum_probs=184.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+++|++++||+|||+|+|+++++... +...........++++||+++ +..+++++++| |||+|||||+++++.|++
T Consensus 69 ~~~r~~laEfiGTflLvf~g~~~~~~-~~~~~~~~~~~~ial~~GlaV--~~~i~~~g~IS-GaHlNPAVTla~al~g~~ 144 (298)
T PLN00026 69 SLTRKLGAEFVGTFILIFAATAGPIV-NQKYDGAETLIGNAACAGLAV--MIVILSTGHIS-GAHLNPSLTIAFAALRHF 144 (298)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHh-ccccCCccchHHHHHHHHHHH--HHHHHHhhccC-ccccCHHHHHHHHHhCCC
Confidence 35799999999999999999976443 111111111225678888887 44488999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCCCccchhhHh
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWIS 159 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~p~~i 159 (236)
+|.+.+.|+++|++|+++|+++++.++++.. +...++++..|+++.|+++|++|+++++.+.+++++.+...++.+
T Consensus 145 --~~~~~~~YiiaQilGAi~aa~~~~~~~~~~~~~g~t~p~~s~~~a~~~Efi~TfiLv~vi~~v~~~~~~~~~~~~l~i 222 (298)
T PLN00026 145 --PWKHVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAV 222 (298)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCceeeecccHHHHHHHHHHHHHHHHHhheeeecCCCCcCCccchHH
Confidence 9999999999999999999999999986531 112235688999999999999999999987554333344688999
Q ss_pred HHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcccccccCcc
Q 026600 160 SVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKS 233 (236)
Q Consensus 160 G~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~~~k~ 233 (236)
|+.+++.++..+++||++|||||||||+++.+ +|+++|+||++|++|+++++++|+++..++++++...|.
T Consensus 223 Gl~V~~~~l~~g~~TGa~mNPARtlgPal~~~---~~~~~wVy~vaPilGAilga~ly~~~~~~~~~~~~~~~~ 293 (298)
T PLN00026 223 GATVMLNILVAGPSTGGSMNPVRTLGPAVAAG---NYRAIWIYLVAPTLGALAGAGTYTAVKLREEDGDPPRPV 293 (298)
T ss_pred HHHHHHHHHHhcccCccccChHHHHHHHHhcC---CchheeHHHHHHHHHHHHHHHHHHHHhCccccccChhhh
Confidence 99999999999999999999999999999976 799999999999999999999999998777765444443
No 7
>PLN00182 putative aquaporin NIP4; Provisional
Probab=100.00 E-value=4.6e-48 Score=336.59 Aligned_cols=212 Identities=17% Similarity=0.255 Sum_probs=178.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+++|++++||+|||+|+|+++++++.. ...+.+.....++++||+++ +..+++++++| |||+|||||+++++.|++
T Consensus 40 ~~~~~~~aEflgTflLvf~g~g~~~~~-~~~~~~~~~~~iala~Gl~v--~~~i~~~g~iS-Gah~NPAVTla~~~~~~~ 115 (283)
T PLN00182 40 CLTQKLIAEMIGTYFIIFSGCGVVVVN-VLYGGTITFPGICVTWGLIV--MVMIYSTGHIS-GAHFNPAVTVTFAIFRRF 115 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-hccCCCcchHHHHHHHHHHH--HHHHHHhcCCC-ccccCHHHHHHHHHHcCC
Confidence 467999999999999999999976642 11111111125677888887 44488999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCCCccchhhH
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQI---GRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWI 158 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~p~~ 158 (236)
+|.+.+.|+++|++|+++|+++++.+++.. .+...++.+..++++.|+++|++|+++++.+.+++++.....|+.
T Consensus 116 --~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~p~~s~~~a~~~E~l~TfiLv~~i~~~~~~~~~~~~~~~l~ 193 (283)
T PLN00182 116 --PWYQVPLYIGAQLTGSLLASLTLRLMFNVTPEAFFGTTPTDSSGQALVAEIIISFLLMFVISGVATDSRAVGELAGIA 193 (283)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccceeeCCCCcchHHHHHHHHHHHHHHHHHHHhheeccccCCcchhHH
Confidence 999999999999999999999999998542 222334457899999999999999999998765433334468999
Q ss_pred hHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcC
Q 026600 159 SSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVR 222 (236)
Q Consensus 159 iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~ 222 (236)
+|+.+++.+++.+++||+++||||||||+++.+ .|+++|+||++|++|+++++++|+++..
T Consensus 194 iGl~V~~~~~~~g~~SGa~lNPARt~gpal~~~---~~~~~wvY~vap~lGA~lgally~~l~~ 254 (283)
T PLN00182 194 VGMTIILNVFVAGPISGASMNPARSLGPAIVMG---RYKGIWVYIVGPFVGIIAGGFVYNLIRF 254 (283)
T ss_pred HHHHHHHHHHHccccCccccChHHHHHHHHHhc---cccceeHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999976 6899999999999999999999999874
No 8
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=100.00 E-value=1.2e-48 Score=332.31 Aligned_cols=208 Identities=22% Similarity=0.319 Sum_probs=177.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCC----CchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHH
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGL-GHA----PSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASG 76 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~-~~~----~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~ 76 (236)
+.+|++++||+||++++++++++.+...+.... +.. ...+++++|+++ +..+++++++| |||+|||||++++
T Consensus 6 ~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~--~~~i~~~~~iS-GaH~NPaVTla~~ 82 (227)
T PF00230_consen 6 SLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLAL--AALIYAFGPIS-GAHFNPAVTLAFA 82 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHH--HHHHHHHHHHH-TSS-SHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhh--hhhhhhhhhcc-ccccccchhhhee
Confidence 578999999999999999999976654333221 111 124666777776 34488999999 9999999999999
Q ss_pred HcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-----C--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCC
Q 026600 77 ISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-----G--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIP 149 (236)
Q Consensus 77 ~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~ 149 (236)
+.|++ +|++++.|+++|++|+++|+.+++.++++. . ..|.++.+..++++.|+++|++|+++++.+.|+++
T Consensus 83 l~g~~--~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~~~t~il~~~i~~~~~~~~ 160 (227)
T PF00230_consen 83 LTGRI--SWKKAIVYIIAQFLGAFLGALLVYALYPDSNSAAGIFATTPPPGISLGQAFFSEFIGTFILVLVILAVADDKR 160 (227)
T ss_dssp HTTSS--SHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHTCTTTTSCGSTTTSSHHHHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred eeeee--cccceeeEEeeccccccccccchhhcccCcccccccccccccccchhhhhhhhhhhhhhHHHhhhhhhccccc
Confidence 99999 999999999999999999999999999762 1 25777889999999999999999999999999764
Q ss_pred CC--ccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHH
Q 026600 150 GS--FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLF 217 (236)
Q Consensus 150 ~~--~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y 217 (236)
+. +.+.|+.||+++.+..+..+++||+++||||||||+++.+ .|+++||||++|++|+++++++|
T Consensus 161 ~~~~~~~~p~~ig~~v~~~~~~~~~~tG~~~NPAr~~g~~l~~~---~~~~~wvy~~~P~~Ga~~a~~~Y 227 (227)
T PF00230_consen 161 KFPLGPLAPLAIGLTVGALVLAGGPYTGASLNPARALGPALFSG---IWDYFWVYWVGPFIGAILAALLY 227 (227)
T ss_dssp SSTSSGGHHHHHHHHHHHHHHHHHHHHST-SSHHHHHHHHHHHT---HHTTTTHHHHHHHHHHHHHHHHH
T ss_pred ccccccccceeEEEEEeecccccccccccccCchhhcCceeecc---cCCeEEEEEehHHHHHHHHHhhC
Confidence 43 2468999999999999999999999999999999999988 59999999999999999999987
No 9
>PTZ00016 aquaglyceroporin; Provisional
Probab=100.00 E-value=5.7e-48 Score=338.50 Aligned_cols=217 Identities=18% Similarity=0.235 Sum_probs=178.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCCC
Q 026600 3 GIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDFS 82 (236)
Q Consensus 3 ~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~~ 82 (236)
++|++++||+||++|+|+++++..... ..+.+.....++++||+++ +..+++++++| |+|+|||||+++++.|++
T Consensus 49 ~~~~~laEfigT~llvf~g~g~~~~~~-~~~~~~~~~~ial~~Glav--~~~i~~~g~iS-G~h~NPAVTla~~l~g~i- 123 (294)
T PTZ00016 49 NVREYVAEFLGTFVLLFFGEGVVATTH-TVGNNGDYLAITIGWGLGV--TFGLLVSAGIS-GGHLNPAVTLGNAVFGKF- 123 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc-ccCCCCCcHHHHHHHHHHH--HHHHHHhcccC-cCccCHHHHHHHHHhccC-
Confidence 468999999999999999999765421 1111111225777888887 34478999999 999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------------CCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 026600 83 NFLFTVGARIPAQVIGSITGVRFILDTFPQIG--------------------RGPSLNVGIHHGALTEGLLTFAIVTISL 142 (236)
Q Consensus 83 ~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~E~~~T~~Lv~~il 142 (236)
+|++.+.|+++|++|+++|++++|.+++++. +.+.++.+..++++.|+++|++|+++++
T Consensus 124 -~~~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~p~~s~~~a~~~E~i~T~iLv~~il 202 (294)
T PTZ00016 124 -PWKKLPGYFVAQLLGAFVGAACVYGLYYGFFKDHGIPELPWETMANGFAGVFATYPREGNFYAIFSELILTAILLLVIL 202 (294)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcccccccccccccceeeCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986420 0122356778999999999999999999
Q ss_pred hhhccCCCC-ccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcC---CCCCCC----cceehhhhhHHHHHHHH
Q 026600 143 GLARKIPGS-FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG---DHITKE----HILVYWLAPIQATVIAL 214 (236)
Q Consensus 143 ~~~~~~~~~-~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~---~~~~~~----~~wvy~v~P~lGa~~a~ 214 (236)
.++|++++. ....|+.||+.+.++.+..+++||++||||||||||++.. +...|+ |+||||+||++|+++++
T Consensus 203 a~~d~~~~~~~~~~pl~IGl~v~~i~~~~g~~TG~smNPAR~fGPal~~~~~~g~~~~~~~~~~~WVy~vgP~vGa~~aa 282 (294)
T PTZ00016 203 AITDPNNCPAFNYLPVAVGLLVFVIGISFGGNTGYALNPARDLGPRLFSAILWGSEVFTKDNYYFWVPLVAPFVGAVLGM 282 (294)
T ss_pred HhccCccCCCcCcccHHHHHHHHHHHHhccCCCCCcccchhhHHHHHHHHHhccccccCcCCceeeeeehHHHHHHHHHH
Confidence 999875432 3467999999999999999999999999999999999862 111343 78999999999999999
Q ss_pred HHHHHhcCCcc
Q 026600 215 WLFKLVVRPLA 225 (236)
Q Consensus 215 ~~y~~l~~~~~ 225 (236)
++|+++++|+.
T Consensus 283 lly~~ll~~~~ 293 (294)
T PTZ00016 283 FLYDKFIPPLI 293 (294)
T ss_pred HHHHHHhCCCC
Confidence 99999998764
No 10
>PLN00167 aquaporin TIP5; Provisional
Probab=100.00 E-value=2.7e-47 Score=328.34 Aligned_cols=223 Identities=20% Similarity=0.255 Sum_probs=185.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCC---CCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHH
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKV-LGL---GHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGI 77 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~-~~~---~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~ 77 (236)
+.+|++++||+|||+|+++++++....... .+. +.....++++||+++ +..+++++++| |+|+|||||++.++
T Consensus 20 ~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v--~~~i~~~g~iS-Gah~NPAvtl~~~~ 96 (256)
T PLN00167 20 NALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFAL--SSAVYIAANIS-GGHVNPAVTFGMAV 96 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHH--HHHHHHhhccc-ccccCHHHHHHHHH
Confidence 357999999999999999999986632111 111 111125778888887 44488999999 99999999999999
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-C--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC-Ccc
Q 026600 78 SGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-G--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG-SFY 153 (236)
Q Consensus 78 ~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~~~ 153 (236)
.|++ +|++.+.|+++|++|+++|+.+.+.++++. . ....++.+..++++.|+++|++|+++++..+|++++ .+.
T Consensus 97 ~g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~T~~L~~~i~~~~~~~~~~~~~ 174 (256)
T PLN00167 97 GGHI--SVPTAMFYWISQMLASVMACLFLKVTTVGQHVPTYKIAEEMTGFGASVLEGVLTFGLVYTVYAAGDPRRGLLGA 174 (256)
T ss_pred hCCC--cHhhhhHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHHHhccccccCCCC
Confidence 9999 999999999999999999999999987653 1 122334567899999999999999999998886432 234
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcccccccCc
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSK 232 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~~~k 232 (236)
..|+.||+.+.+..+..+++||+++||||||||+++.+ .|+++|+||+||++|+++++++|++++.|+.+|..+++
T Consensus 175 ~~pl~iGl~v~~~~~~~g~~TG~a~NPAR~~gPal~~~---~~~~~wvywvgP~~Ga~l~a~~y~~l~~~~~~~~~~~~ 250 (256)
T PLN00167 175 IGPLAIGLVAGANVLAAGPFSGGSMNPACAFGSAVVAG---SFKNQAVYWVGPLLGGAVAGLLYDNVVFPTQDDRGSST 250 (256)
T ss_pred cchHHHHHHHHHHHHhccCCCCcccCcccchHHHHhcc---CccCcEEEeHHHHHHHHHHHHHHHHHhCCCcCCCCCCc
Confidence 68999999999999999999999999999999999976 68999999999999999999999999988877666544
No 11
>PLN00166 aquaporin TIP2; Provisional
Probab=100.00 E-value=4.5e-47 Score=326.04 Aligned_cols=216 Identities=21% Similarity=0.266 Sum_probs=180.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC----CCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHc
Q 026600 3 GIRLVVSDFILSFMWVWQSVLIKIFVYKVLGL----GHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGIS 78 (236)
Q Consensus 3 ~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~ 78 (236)
.+|++++||+||++|+++++++.....+..+. ......++++||+++ +..+++++++| |+|+|||+|++.++.
T Consensus 17 ~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v--~~~i~~~g~iS-Gah~NPAvt~~~~l~ 93 (250)
T PLN00166 17 SLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFAL--FVGVSIAANIS-GGHLNPAVTLGLAIG 93 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHH--HHHHHHHhccc-ccccCHHHHHHHHHh
Confidence 46899999999999999999987642111110 111225677788887 44488999999 999999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC---CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC--Ccc
Q 026600 79 GDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG---RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG--SFY 153 (236)
Q Consensus 79 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~--~~~ 153 (236)
|++ +|.+.+.|+++|++|+++|+.+.+.+++++. ....++.+..++++.|+++|++|+++++.+.+++++ .+.
T Consensus 94 g~~--~~~~~~~y~~aq~lGa~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~Tf~Lv~~i~~~~~~~~~~~~~~ 171 (250)
T PLN00166 94 GNI--TIITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGT 171 (250)
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcccccCCCCcHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 999 9999999999999999999999999886531 133446788999999999999999999998664322 234
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
..|+.||+.+++.++..+++||++||||||||||++++ +|+++|+||++|++|+++++++|+.++.+..+
T Consensus 172 ~~p~~iGl~v~~~~~~~~~~tG~~~NPAR~~gPal~~~---~~~~~wvywvgPi~Ga~~aa~~y~~l~~~~~~ 241 (250)
T PLN00166 172 IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSG---DFSQIWIYWVGPLVGGALAGLIYGDVFIGSYA 241 (250)
T ss_pred chhHHHHHHHHHHHHcccCCCCCccCchHhhHHHHhcC---CCcccchhhHHHHHHHHHHHHHHHHHhcccCC
Confidence 78999999999999999999999999999999999987 69999999999999999999999988655444
No 12
>PLN00027 aquaporin TIP; Provisional
Probab=100.00 E-value=5e-47 Score=326.57 Aligned_cols=215 Identities=20% Similarity=0.246 Sum_probs=180.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC----CCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHc
Q 026600 3 GIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLG----HAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGIS 78 (236)
Q Consensus 3 ~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~ 78 (236)
.+|++++||+||++|+++++++++..++..+.+ .....++++||+++ +..+++.+++| |+|+|||+|++.++.
T Consensus 19 ~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v--~~~i~~~~~iS-Gah~NPAvtl~~~~~ 95 (252)
T PLN00027 19 ALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFAL--FVAVSVGANIS-GGHVNPAVTFGAFIG 95 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHH--HHHHHHHcccC-ccccChHHHHHHHHh
Confidence 468899999999999999999876432221111 11124677888887 44478999999 999999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhc-cCCC-Ccc
Q 026600 79 GDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI---GRGPSLNVGIHHGALTEGLLTFAIVTISLGLAR-KIPG-SFY 153 (236)
Q Consensus 79 g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~-~~~~-~~~ 153 (236)
|++ +|.+.+.|+++|++|+++|+.+.+.+.++. ...+.++++..++++.|+++|++|+++++.+.. ++++ ...
T Consensus 96 g~~--~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~~ 173 (252)
T PLN00027 96 GNI--TLLRGILYWIAQLLGSVVACLLLKFSTGGLETSAFSLSSGVGVWNAFVFEIVMTFGLVYTVYATAVDPKKGDLGI 173 (252)
T ss_pred CCC--CHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhccccccCCccc
Confidence 999 999999999999999999999999887653 223455778999999999999999999998754 3322 234
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcc
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
..|+.||+.+...+++++++||++||||||||||++.+ .|+++||||+||++|+++++++|++++.++.
T Consensus 174 ~~p~~iGl~v~~~~~~~g~~TG~~~NPAR~~gPal~~~---~~~~~wvy~vgP~~Ga~laa~~y~~l~~~~~ 242 (252)
T PLN00027 174 IAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVSW---TWTNHWVYWAGPLIGGGIAGLVYELIFIGST 242 (252)
T ss_pred hHHHHHHHHHHHHHHhcccccccccCcchhHHHHHHhh---cchhhhHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 78999999999999999999999999999999999987 6999999999999999999999999987644
No 13
>PLN00183 putative aquaporin NIP7; Provisional
Probab=100.00 E-value=8.7e-45 Score=314.94 Aligned_cols=214 Identities=19% Similarity=0.253 Sum_probs=180.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC-chhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 3 GIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAP-SGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 3 ~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
.+|++++||+|||+++|+++++.... +..+ +... ..+++.+|+++ +..+++++++| |+|+|||+|+++++.|++
T Consensus 44 ~~~~~laEfigTfllvf~~~g~~~~~-~~~~-~~~~~~~~al~~Gl~V--~~~i~~~g~vS-Gah~NPAvTla~~l~g~i 118 (274)
T PLN00183 44 PARMVLAEMVGTFILMFCVCGIIAST-QLSG-GEVGLLEYAATAGLTV--VVVVFSIGSIS-GAHVNPSVTIAFATFGHF 118 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc-cccC-CccchHHHHHHHHHHH--HHHHHHhhccC-ccccCHHHHHHHHHhcCC
Confidence 47999999999999999999876531 1111 1111 24677888887 33478999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCCCccchhhHh
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQI--GRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWIS 159 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~p~~i 159 (236)
+|.+.+.|+++|++|+++|+.+++.+++.. ...+.+..+..++++.|+++|++|+++++.+.+++++.+...|+.+
T Consensus 119 --~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~p~~~~~~~~~~E~v~T~iLv~~i~~~~~~~~~~~~~~~l~i 196 (274)
T PLN00183 119 --PWSKVPLYITAQTVGSVLATYVGVSVYGVKADLMTTKPAQGCSSAFWVEFIATFIVMFLAASLTSQPQSLGHLSGFVI 196 (274)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCcccHHHHHHHHHHHHHHHHHhhheeeccccCCCCceehHH
Confidence 999999999999999999999999988653 2223344567899999999999999999998876433444678999
Q ss_pred HHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 160 SVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 160 G~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
|+.+++.+++.+++||+++||||+|+|+++.+ .|+++|+||++|++|+++++++|++++.++..
T Consensus 197 Gl~v~~~v~~~g~~TG~~~NPArtlgpai~~~---~~~~~wvy~vapilGailaa~l~~~l~~~~~~ 260 (274)
T PLN00183 197 GIAIGLAVLITGPVSGGSMNPARSLGPAIVSW---DFKDIWIYITAPTIGAVAGALMFHLLRLRTQP 260 (274)
T ss_pred HHHHHHHHHhccCCCCCEeCHHHHHHHHHhCC---ChhheehHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999875 79999999999999999999999999877754
No 14
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=100.00 E-value=6.4e-44 Score=303.64 Aligned_cols=210 Identities=24% Similarity=0.367 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC-chhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCCCc
Q 026600 5 RLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAP-SGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDFSN 83 (236)
Q Consensus 5 r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~~~ 83 (236)
|++++||+||++++++++++..... ..+....+ ..++++||+++ ...+++++++| |+|+|||+|++.++.|++
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~-~~~~~~~~~~~~~~~~gl~v--~~~~~~~~~~s-ga~~NPa~t~~~~~~~~~-- 74 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVK-LAGGASGGLLGIALAWGFAI--FVLVYAVGHIS-GGHINPAVTLALAVGGRF-- 74 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhcc-ccCCCCCcHHHHHHHHHHHH--HHHHHHhccCC-CCeEcHHHHHHHHHhCCC--
Confidence 7899999999999999999876422 11111111 24677888887 44478999999 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcCCC------C---------CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccC
Q 026600 84 FLFTVGARIPAQVIGSITGVRFILDTFPQI------G---------RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKI 148 (236)
Q Consensus 84 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~------~---------~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~ 148 (236)
+|++.+.|+++|++|+++|+.+.+.+++++ . ..|.++.+..++++.|+++|++|+++++.+.+++
T Consensus 75 ~~~~~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~v~T~~Lv~~i~~~~~~~ 154 (228)
T cd00333 75 PLIRVIPYIIAQLLGAILGAALLYGLYYGLYLEFLGANNIVAGIFGTYPSPGVSNGNAFFVEFIGTFILVLVVFATTDDP 154 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhcCCccccccceeccCCCCCccHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 999999999999999999999999998542 0 1345667889999999999999999999998864
Q ss_pred CC--CccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHh
Q 026600 149 PG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLV 220 (236)
Q Consensus 149 ~~--~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l 220 (236)
++ +....|+.+|+.+.+..+..+++||+++|||||++|+++.+..+.|+++|+||++|++|+++++++|+++
T Consensus 155 ~~~~~~~~~~~~iGl~v~~~~~~~g~~sG~~~NPAr~~g~~i~~~~~~~~~~~~vy~vap~lGai~aa~l~~~~ 228 (228)
T cd00333 155 NGPPPGGLAPLAIGLLVAAIGLAGGPITGASMNPARSLGPALFTGLARHWHYFWVYWVGPLIGAIAGALVYDYV 228 (228)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHHhhcccccccCHhhchHHHHHhccccccceeehhhhHHHHHHHHHHHHHHhC
Confidence 43 3456889999999999999999999999999999999998743359999999999999999999999864
No 15
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=100.00 E-value=2.7e-41 Score=285.39 Aligned_cols=203 Identities=22% Similarity=0.274 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhc--C-CCC-CCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCCCch
Q 026600 9 SDFILSFMWVWQSVLIKIFVYKVL--G-LGH-APSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDFSNF 84 (236)
Q Consensus 9 aEfigT~~lv~~g~~~~~~~~~~~--~-~~~-~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~~~~ 84 (236)
+||+||++++++++++........ + .+. ....++++||+++ ...+++++++| |+|+|||+|++.++.|++ +
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v--~~~~~~~~~~s-g~h~NPavt~~~~l~~~~--~ 75 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAV--ATLVYCVGGIS-GAHLNPAVTIALLLGRRF--P 75 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHH--HHHHHHHhccc-ccccCHHHHHHHHHhCCC--C
Confidence 599999999999999876532211 1 111 1124677888887 44588999999 999999999999999999 9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCCC----C---CCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC--Cccch
Q 026600 85 LFTVGARIPAQVIGSITGVRFILDTFPQIG----R---GPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG--SFYMK 155 (236)
Q Consensus 85 ~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~----~---~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~--~~~~~ 155 (236)
|++.+.|+++|++|+++|+.+.+.+++++. . .+.++.+..++++.|+++|++|+++++...+++++ +....
T Consensus 76 ~~~~~~y~~aQ~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~i~T~~lv~~~~~~~~~~~~~~~~~~~ 155 (216)
T TIGR00861 76 LKRVPVYIVAQLIGAILGAALLYGLTSGLFPGNLAVNGSGAAGVSSGQAFFVEFIGTAILVLVIFATTDPRNRVPRGGFA 155 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccccccCCccccCCCCCcccHHHHHHHHHHHHHHHHHHHheeecCCCCCCCCccH
Confidence 999999999999999999999999987541 1 23345688999999999999999999999876433 22368
Q ss_pred hhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHH
Q 026600 156 TWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLF 217 (236)
Q Consensus 156 p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y 217 (236)
|+.+|+.+...++..+++||+++|||||++|+++.+. .+|+++|+||++|++|+++++++|
T Consensus 156 ~~~iG~~v~~~~~~~g~~sG~~~NPAr~l~~~l~~~~-~~~~~~~vy~vap~~Ga~~a~~~y 216 (216)
T TIGR00861 156 PLAIGLLVFLIHLSMGPYTGTGMNPARSLGPALFAGL-AGWGNHWVYWVGPIIGAILGALVY 216 (216)
T ss_pred HHHHHHHHHHHHHhCCCCcccccCchhhhhHHHHhcc-ccccceeHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999998752 368999999999999999999875
No 16
>PLN00026 aquaporin NIP; Provisional
Probab=99.64 E-value=9.5e-16 Score=134.59 Aligned_cols=107 Identities=17% Similarity=0.217 Sum_probs=88.7
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHhhhcc--CCC-Cccc--hhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhc
Q 026600 116 GPSLNVGIHHGALTEGLLTFAIVTISLGLARK--IPG-SFYM--KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR 190 (236)
Q Consensus 116 ~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~--~~~-~~~~--~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~ 190 (236)
.|.++++.+|.++.|+++|++|+++++..... +.+ .... .++.+|+.+++.+++.++.||+++||||++++++..
T Consensus 63 ~~~~~~~~~r~~laEfiGTflLvf~g~~~~~~~~~~~~~~~~~~ial~~GlaV~~~i~~~g~ISGaHlNPAVTla~al~g 142 (298)
T PLN00026 63 LPPPDVSLTRKLGAEFVGTFILIFAATAGPIVNQKYDGAETLIGNAACAGLAVMIVILSTGHISGAHLNPSLTIAFAALR 142 (298)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhC
Confidence 35556788899999999999999999865332 111 1112 357899999999999999999999999999999975
Q ss_pred CCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 191 GDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 191 ~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
+ ..|.+.|+||++|++|+++|+++++.++.+.
T Consensus 143 ~--~~~~~~~~YiiaQilGAi~aa~~~~~~~~~~ 174 (298)
T PLN00026 143 H--FPWKHVPAYIAAQVSASICASFALKGVFHPF 174 (298)
T ss_pred C--CcHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 4 3799999999999999999999999988763
No 17
>PLN00184 aquaporin NIP1; Provisional
Probab=99.62 E-value=2e-15 Score=132.68 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=85.2
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhccC-CC--Cccch--hhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCC
Q 026600 120 NVGIHHGALTEGLLTFAIVTISLGLARKI-PG--SFYMK--TWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI 194 (236)
Q Consensus 120 ~~~~~~~~~~E~~~T~~Lv~~il~~~~~~-~~--~~~~~--p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~ 194 (236)
+.+..+.++.|+++|++|+++++.....+ .+ ..... ++..|+.+++.+++.++.||+++||||++++++..+ .
T Consensus 50 ~~~~~~~~~aEfiGTflLvf~g~g~~~~~~~~~~~~~~~~iai~~Gl~v~~~i~~~g~iSGaH~NPAVTla~al~g~--~ 127 (296)
T PLN00184 50 SVPFLQKLIAEVLGTYFLVFTGCASVVVNMQNDNVVTLPGIAIVWGLTIMVLIYSLGHISGAHINPAVTIAFASCGR--F 127 (296)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCccccHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHhCC--C
Confidence 34578999999999999999999875321 11 11233 345599999999999999999999999999999754 3
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHhcCCcc
Q 026600 195 TKEHILVYWLAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 195 ~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
+|.+.|+||++|++|+++|+++++.++....
T Consensus 128 ~~~~~~~YiiaQllGA~lga~~~~~l~~~~~ 158 (296)
T PLN00184 128 PLKQVPAYVISQVIGSTLAAATLRLLFGLDH 158 (296)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 7899999999999999999999999886544
No 18
>PLN00183 putative aquaporin NIP7; Provisional
Probab=99.55 E-value=2.8e-14 Score=124.28 Aligned_cols=104 Identities=13% Similarity=0.136 Sum_probs=87.2
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhhccCCC-C--ccc--hhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCC
Q 026600 119 LNVGIHHGALTEGLLTFAIVTISLGLARKIPG-S--FYM--KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH 193 (236)
Q Consensus 119 ~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~--~~~--~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~ 193 (236)
.+.+.++.++.|+++|++++++.+...+++.. . ... .++.+|+.+.+.+++.++.||+++||||++++.+..+
T Consensus 40 ~~~~~~~~~laEfigTfllvf~~~g~~~~~~~~~~~~~~~~~al~~Gl~V~~~i~~~g~vSGah~NPAvTla~~l~g~-- 117 (274)
T PLN00183 40 MDLNPARMVLAEMVGTFILMFCVCGIIASTQLSGGEVGLLEYAATAGLTVVVVVFSIGSISGAHVNPSVTIAFATFGH-- 117 (274)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccchHHHHHHHHHHHHHHHHHhhccCccccCHHHHHHHHHhcC--
Confidence 35667899999999999999999988764221 1 122 4568999999999999999999999999999999854
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 194 ITKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 194 ~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
..|.+.|+||++|++|+++++.+++.++...
T Consensus 118 i~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 148 (274)
T PLN00183 118 FPWSKVPLYITAQTVGSVLATYVGVSVYGVK 148 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3688999999999999999999999887653
No 19
>PLN00166 aquaporin TIP2; Provisional
Probab=99.54 E-value=2.3e-14 Score=123.42 Aligned_cols=101 Identities=22% Similarity=0.283 Sum_probs=84.1
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhcc--C--CC----Ccc--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhc
Q 026600 121 VGIHHGALTEGLLTFAIVTISLGLARK--I--PG----SFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR 190 (236)
Q Consensus 121 ~~~~~~~~~E~~~T~~Lv~~il~~~~~--~--~~----~~~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~ 190 (236)
.+..|+++.|+++|++|+++.+...++ + +. ... ..++.+|+.+++.+++.++.||+++||||++++.+..
T Consensus 15 ~~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSGah~NPAvt~~~~l~g 94 (250)
T PLN00166 15 VASLKAYLSEFIATLLFVFAGVGSAIAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAIGG 94 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccccccCCCCccHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhC
Confidence 456789999999999999999998543 1 10 111 2457799999999999999999999999999999963
Q ss_pred CCCCCCCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 191 GDHITKEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 191 ~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
+ ..|.+.|+||++|++|+++++.+++.++.+
T Consensus 95 ~--~~~~~~~~y~~aq~lGa~~~a~~~~~~~~~ 125 (250)
T PLN00166 95 N--ITIITGFFYWIAQCLGSIVACLLLVFVTNG 125 (250)
T ss_pred C--CCHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3 368899999999999999999999988654
No 20
>cd00333 MIP Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal cytosolic portion followed by six transmembrane helices, which might have arisen through gene duplication. On the basis of sequence similarity and functional characteristics, the superfamily can be subdivided into two major groups: water-selective channels called aquaporins (AQPs) and glycerol uptake facilitators (GlpFs). AQPs are found in all three kingdoms of life, while GlpFs have been characterized only within microorganisms.
Probab=99.50 E-value=4.9e-14 Score=120.00 Aligned_cols=103 Identities=20% Similarity=0.174 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCC--C--Cc--cchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCc
Q 026600 125 HGALTEGLLTFAIVTISLGLARKIP--G--SF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH 198 (236)
Q Consensus 125 ~~~~~E~~~T~~Lv~~il~~~~~~~--~--~~--~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~ 198 (236)
|.++.|+++|+++++..+....++. + .. ...++.+|+.+...++..++.||+++|||+++++.+..+ .+|++
T Consensus 1 r~~~~E~~gT~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~~~~~~~sga~~NPa~t~~~~~~~~--~~~~~ 78 (228)
T cd00333 1 RKYLAEFLGTFLLVFFGCGSVLAVKLAGGASGGLLGIALAWGFAIFVLVYAVGHISGGHINPAVTLALAVGGR--FPLIR 78 (228)
T ss_pred ChhhHHHHHHHHHHHHHhHHHhhccccCCCCCcHHHHHHHHHHHHHHHHHHhccCCCCeEcHHHHHHHHHhCC--CCHHH
Confidence 3578999999999999998865421 1 11 235788999999999999999999999999999999854 36999
Q ss_pred ceehhhhhHHHHHHHHHHHHHhcCCcccccc
Q 026600 199 ILVYWLAPIQATVIALWLFKLVVRPLAEEKK 229 (236)
Q Consensus 199 ~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~ 229 (236)
.|+||++|++|+++++.+++.++.++.++++
T Consensus 79 ~~~y~~aq~~Ga~~~~~~~~~~~~~~~~~~~ 109 (228)
T cd00333 79 VIPYIIAQLLGAILGAALLYGLYYGLYLEFL 109 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHhhcC
Confidence 9999999999999999999998887765443
No 21
>PLN00167 aquaporin TIP5; Provisional
Probab=99.49 E-value=1.3e-13 Score=119.26 Aligned_cols=102 Identities=21% Similarity=0.333 Sum_probs=85.8
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhccCC----CC------ccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHh
Q 026600 120 NVGIHHGALTEGLLTFAIVTISLGLARKIP----GS------FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA 189 (236)
Q Consensus 120 ~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~----~~------~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 189 (236)
.-+.++.++.|+++|++|+++.+...+++. ++ ....++.+|+.+++.+++.++.||+++||||++++.+.
T Consensus 18 ~~~~~~~~laEflgTf~lv~~~~g~~~~~~~~~~~~~~~~~~~~~i~l~~Gl~v~~~i~~~g~iSGah~NPAvtl~~~~~ 97 (256)
T PLN00167 18 TRNALRSYLAEFISTFFFVFAAVGSAMSSRKLMPDAASDPSSLLIVAIANAFALSSAVYIAANISGGHVNPAVTFGMAVG 97 (256)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccCCCCcchHHHHHHHHHHHHHHHHhhcccccccCHHHHHHHHHh
Confidence 345678999999999999999998866321 11 11367999999999999999999999999999999997
Q ss_pred cCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 190 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 190 ~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
.+ ..|.+.|+||++|++|+++++.+++.++..
T Consensus 98 g~--~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 129 (256)
T PLN00167 98 GH--ISVPTAMFYWISQMLASVMACLFLKVTTVG 129 (256)
T ss_pred CC--CcHhhhhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 44 368999999999999999999999887654
No 22
>PLN00027 aquaporin TIP; Provisional
Probab=99.47 E-value=2.4e-13 Score=117.41 Aligned_cols=100 Identities=22% Similarity=0.290 Sum_probs=82.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhc------cCCC--Ccc--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLAR------KIPG--SFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG 191 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~------~~~~--~~~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~ 191 (236)
+..|.++.|+++|++|+++.+.... ++++ ... ..++.+|+.+.+.+++.++.||+++||||++++.+..+
T Consensus 18 ~~~~~~~aEfigTf~lv~~g~g~~~~~~~~~~~~~~~~~~~l~~~l~~Gl~v~~~i~~~~~iSGah~NPAvtl~~~~~g~ 97 (252)
T PLN00027 18 DALKAALAEFISTLIFVFAGEGSGMAFNKLTDNGSTTPAGLVAAALAHAFALFVAVSVGANISGGHVNPAVTFGAFIGGN 97 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCcchHHHHHHHHHHHHHHHHHHcccCccccChHHHHHHHHhCC
Confidence 4578999999999999999987631 1111 111 36789999999999999999999999999999997533
Q ss_pred CCCCCCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 192 DHITKEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 192 ~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
..|...|+||++|++|+++++++++.+...
T Consensus 98 --~~~~~~~~yi~aQ~lGa~~ga~~~~~~~~~ 127 (252)
T PLN00027 98 --ITLLRGILYWIAQLLGSVVACLLLKFSTGG 127 (252)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 368889999999999999999999877543
No 23
>PLN00182 putative aquaporin NIP4; Provisional
Probab=99.46 E-value=2.3e-13 Score=119.03 Aligned_cols=102 Identities=16% Similarity=0.194 Sum_probs=83.9
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHhhhccCC---CCccc--hhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCC
Q 026600 120 NVGIHHGALTEGLLTFAIVTISLGLARKIP---GSFYM--KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI 194 (236)
Q Consensus 120 ~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~---~~~~~--~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~ 194 (236)
..+..+.++.|+++|++|+++.+....... +.... ..+.+|+.+++.+++.++.||+++|||+++++++..+ .
T Consensus 38 ~~~~~~~~~aEflgTflLvf~g~g~~~~~~~~~~~~~~~~iala~Gl~v~~~i~~~g~iSGah~NPAVTla~~~~~~--~ 115 (283)
T PLN00182 38 IVCLTQKLIAEMIGTYFIIFSGCGVVVVNVLYGGTITFPGICVTWGLIVMVMIYSTGHISGAHFNPAVTVTFAIFRR--F 115 (283)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchHHHHHHHHHHHHHHHHHhcCCCccccCHHHHHHHHHHcC--C
Confidence 345678999999999999999988654311 11112 2457899999999999999999999999999999865 3
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 195 TKEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 195 ~~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
+|.+.|+||++|++|+++++++.+.++..
T Consensus 116 ~~~~~~~Yi~aQ~lGa~~ga~~~~~~~~~ 144 (283)
T PLN00182 116 PWYQVPLYIGAQLTGSLLASLTLRLMFNV 144 (283)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999999998888743
No 24
>PTZ00016 aquaglyceroporin; Provisional
Probab=99.45 E-value=2.1e-13 Score=120.13 Aligned_cols=103 Identities=16% Similarity=0.118 Sum_probs=85.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhccCC--C-Cc--cchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARKIP--G-SF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK 196 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~~~--~-~~--~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~ 196 (236)
+..+.++.|+++|++++++.+....+.. + +. ...++.+|+.+++.+++.++.||+++|||+++++.+..+ ..|
T Consensus 48 ~~~~~~laEfigT~llvf~g~g~~~~~~~~~~~~~~~~ial~~Glav~~~i~~~g~iSG~h~NPAVTla~~l~g~--i~~ 125 (294)
T PTZ00016 48 PNVREYVAEFLGTFVLLFFGEGVVATTHTVGNNGDYLAITIGWGLGVTFGLLVSAGISGGHLNPAVTLGNAVFGK--FPW 125 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcHHHHHHHHHHHHHHHHHhcccCcCccCHHHHHHHHHhcc--CCH
Confidence 4568999999999999999888765321 1 11 124578899999999999999999999999999999755 378
Q ss_pred CcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 197 EHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 197 ~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
.+.|.||++|++|+++|+++.+.+++++.+
T Consensus 126 ~~~~~YiiaQ~lGa~~ga~ll~~~~~~~~~ 155 (294)
T PTZ00016 126 KKLPGYFVAQLLGAFVGAACVYGLYYGFFK 155 (294)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999998888776544
No 25
>PRK05420 aquaporin Z; Provisional
Probab=99.44 E-value=5.4e-13 Score=113.81 Aligned_cols=98 Identities=18% Similarity=0.199 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc--C-CC-Cccc--hhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCC
Q 026600 124 HHGALTEGLLTFAIVTISLGLARK--I-PG-SFYM--KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKE 197 (236)
Q Consensus 124 ~~~~~~E~~~T~~Lv~~il~~~~~--~-~~-~~~~--~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~ 197 (236)
.|.++.|+++|++|+++....... + ++ +... .++.+|+.+.+.+++.++.||+++|||+++++.+..+ .+|.
T Consensus 2 ~~~~laEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~ial~~Gl~v~~~i~~~g~iSG~h~NPAvtl~~~~~~~--i~~~ 79 (231)
T PRK05420 2 FKKLAAEFFGTFWLVFGGCGSAVLAAAFPELGIGFLGVALAFGLTVLTMAYAVGHISGGHFNPAVSVGLWAGGR--FPAK 79 (231)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHhCC--CCHH
Confidence 578999999999999988776421 1 11 1112 3689999999999999999999999999999999743 3799
Q ss_pred cceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 198 HILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 198 ~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
+.|+||++|++|+++++.+.+.++.+
T Consensus 80 ~~~~Y~~aQ~lGa~~ga~l~~~~~~~ 105 (231)
T PRK05420 80 ELVPYIIAQVVGGIAAAAVLYLIASG 105 (231)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999777766654
No 26
>TIGR00861 MIP MIP family channel proteins. processes. Some members of the family, including the yeast FPS protein (TC #1.A.8.5.1) and tobacco NtTIPA may transport both water and small solutes.
Probab=99.35 E-value=2.2e-12 Score=108.97 Aligned_cols=95 Identities=21% Similarity=0.246 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHhhhcc---CC--CC-----ccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCc
Q 026600 129 TEGLLTFAIVTISLGLARK---IP--GS-----FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH 198 (236)
Q Consensus 129 ~E~~~T~~Lv~~il~~~~~---~~--~~-----~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~ 198 (236)
.|+++|++|+++.+....+ ++ +. ....++.+|+.+...++..++.||+++||||++++.+..+ .+|++
T Consensus 1 aEf~gT~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gl~v~~~~~~~~~~sg~h~NPavt~~~~l~~~--~~~~~ 78 (216)
T TIGR00861 1 AEFLGTFLLVFFGVGSALGVNVAGAYGAVGGGQFLGVALAFGLAVATLVYCVGGISGAHLNPAVTIALLLGRR--FPLKR 78 (216)
T ss_pred CcHHHHHHHHHHHHHHHHhhhcccccCCCCCcchHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHhCC--CCHHH
Confidence 4999999999999988653 11 11 1135788999999999999999999999999999999855 36999
Q ss_pred ceehhhhhHHHHHHHHHHHHHhcCCcc
Q 026600 199 ILVYWLAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 199 ~wvy~v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
.|+||++|++|+++++++++.++.++.
T Consensus 79 ~~~y~~aQ~~Ga~~~~~~~~~~~~~~~ 105 (216)
T TIGR00861 79 VPVYIVAQLIGAILGAALLYGLTSGLF 105 (216)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 999999999999999999998887764
No 27
>COG0580 GlpF Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]
Probab=99.23 E-value=3.4e-11 Score=102.48 Aligned_cols=106 Identities=17% Similarity=0.104 Sum_probs=87.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcc----CCC---Ccc-chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARK----IPG---SFY-MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH 193 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~----~~~---~~~-~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~ 193 (236)
+..+-++.|+++|++|++....+... +.+ ... ...+..|+.+.+.+++.++.||+++|||.+++.++..+-
T Consensus 3 ~~~~~~~aEflGT~~Li~~G~G~~a~~~l~~~~~~~~~~~~i~~~wGl~V~~~iy~~g~iSGaHlNPAVTi~la~~g~f- 81 (241)
T COG0580 3 TLTKKLLAEFLGTFLLIFFGNGSVAAVALKGSKALGGGWLGIALAWGLGVLVAIYAFGGISGAHLNPAVTIALAVRGRF- 81 (241)
T ss_pred cHHHHHHHHHHHHHHHHHhhccHHHHHHhccccccccceeehhHHHHHHHHHHHHhccCcCccccChHHHHHHHHhCCC-
Confidence 34566799999999999987766431 211 111 245788999999999999999999999999999987663
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHhcCCcccccc
Q 026600 194 ITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKK 229 (236)
Q Consensus 194 ~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~ 229 (236)
+|.+...||++|++|+++++.+...++.++.+|.|
T Consensus 82 -p~~~v~~YivAQ~lGA~~ga~l~~~~~~~~~~~~~ 116 (241)
T COG0580 82 -PWRKVLPYIVAQVLGAFAGAALLYLLYYGKILETE 116 (241)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Confidence 78999999999999999999888888888888666
No 28
>KOG0224 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.10 E-value=2.1e-10 Score=99.36 Aligned_cols=101 Identities=17% Similarity=0.099 Sum_probs=81.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcc----CCCCcc--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARK----IPGSFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT 195 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~----~~~~~~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~ 195 (236)
...|.+++|+++|++|++.-+++..+ +.+... -.-+..|+.++..++..+..||+++|||.+++..++.+ -+
T Consensus 30 ~l~Re~LAEFlGT~vL~~~G~g~v~Q~vls~g~~g~~~~vnlgwg~av~~gVyvag~iSGgHlNPAVS~a~~~~g~--~p 107 (316)
T KOG0224|consen 30 ELLREFLAEFLGTFVLVVFGLGSVAQAVLSGGTGGSFIGVNLGWGFAVMMGVYVAGRISGGHLNPAVSLAMCILGR--LP 107 (316)
T ss_pred HHHHHHHHHHHhHHHHHhhccceeEEEEeccCCCCceEEEEehHhHHHHHHHHhhccccccccCHHHHHHHHHhcC--CC
Confidence 46788999999999999988877653 222222 23478899999999999999999999999999888866 38
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 196 KEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 196 ~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
|..+.+|.++|++||.+++..-..++.+.
T Consensus 108 ~~k~p~Y~~aQ~iGAF~gaa~~y~~y~d~ 136 (316)
T KOG0224|consen 108 WKKFPVYVLAQFIGAFLGAATVYGLYYDA 136 (316)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987654444443
No 29
>KOG0223 consensus Aquaporin (major intrinsic protein family) [Carbohydrate transport and metabolism]
Probab=99.05 E-value=8.6e-10 Score=94.08 Aligned_cols=104 Identities=20% Similarity=0.206 Sum_probs=86.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhhccCC-CCc----cchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCC
Q 026600 119 LNVGIHHGALTEGLLTFAIVTISLGLARKIP-GSF----YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH 193 (236)
Q Consensus 119 ~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~-~~~----~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~ 193 (236)
.+.+..|..+.||++|++++++.+......+ ... ....+..|+.+++.+.+.+..||+++|||.+++-.+..+
T Consensus 6 ~~~~~~~~~~aEF~~T~~~vf~g~~~~~~~~~~~~~~~l~~ial~~Gl~v~v~i~~~g~iSGaH~NPAVT~a~~~~~~-- 83 (238)
T KOG0223|consen 6 LSVSFLRALIAEFLATFLFVFAGCGSVVVNPKYGGPVGLLGIALAFGLAVFVLVYSTGHISGAHFNPAVTLAFAVGGK-- 83 (238)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCchhHHHHHHHHHHHHHHHhhhccccccccCHHHHHHHHHhCC--
Confidence 3457889999999999999999988765322 111 124578899999999999999999999999999777655
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 194 ITKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 194 ~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
..+.+...||++|++|+++++.+.+.+.+++
T Consensus 84 isl~~~~~Y~vaQ~lGa~~g~~~l~~~~~~~ 114 (238)
T KOG0223|consen 84 ISLFRAVAYIVAQLLGAIAGAALLKVVTPGQ 114 (238)
T ss_pred CcHHHhHHHHHHHHHHHHHHHHHHheecCcc
Confidence 4788899999999999999999999888775
No 30
>PF00230 MIP: Major intrinsic protein; InterPro: IPR000425 A number of transmembrane (TM) channel proteins can be grouped together on the basis of sequence similarities [, , , , ]. These include: Mammalian major intrinsic protein (MIP). MIP is the major component of lens fibre gap junctions. Mammalian aquaporins []. These proteins form water- specific channels that provide the plasma membranes of red cells and kidney prox imal and collecting tubules with high permeability to water, thereby permitting water to move in the direction of an osmotic gradient. Soybean nodulin-26, a major component of the peribacteroid membrane induced during nodulation in legume roots after Rhizobium infection. Plants tonoplast intrinsic proteins (TIP). There are various isoforms of TIP : alpha (seed), gamma, Rt (root), and Wsi (water-stress induced). These proteins may allow the diffusion of water, amino acids and/or peptides from the tonoplas t interior to the cytoplasm. Bacterial glycerol facilitator protein (gene glpF), which facilitates the mo vement of glycerol across the cytoplasmic membrane. Salmonella typhimurium propanediol diffusion fac ilitator (gene pduF). Yeast FPS1, a glycerol uptake/efflux facilitator protein. Drosophila neurogenic protein 'big brain' (bib). This protein may mediate in tercellular communication; it may functions by allowing the transport of certain molecules(s) and thereby sending a signal for an exodermal cell to become an ep idermoblast instead of a neuroblast. Yeast hypothetical protein YFL054c. A hypothetical protein from the pepX region of Lactococcus lactis. The structures of various members of the MIP family have been determined by means of X-ray diffraction [, , ], revealing the fold to comprise a right-handed bundle of 6 transmembrane (TM) alpha-helices [, , ]. Similarities in the N-and C-terminal halves of the molecule suggest that the proteins may have arisen through tandem, intragenic duplication of an ancestral protein that contained 3 TM domains []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins []. Aquaporin-CHIP (Aquaporin 1) belongs to the Colton blood group system and is associated with Co(a/b) antigen.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3NE2_A 2C32_A 1YMG_A 2B6P_A 3C02_A 2B5F_D 3CN6_A 3CN5_A 1Z98_M 3CLL_A ....
Probab=99.00 E-value=5e-10 Score=95.10 Aligned_cols=102 Identities=19% Similarity=0.175 Sum_probs=79.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhc---cCCCC----c--c--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHh
Q 026600 121 VGIHHGALTEGLLTFAIVTISLGLAR---KIPGS----F--Y--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA 189 (236)
Q Consensus 121 ~~~~~~~~~E~~~T~~Lv~~il~~~~---~~~~~----~--~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 189 (236)
.+..|.++.|+++|+++++....... +...+ . . ...+..|+.+.+.+...++.||+++|||.+++-.+.
T Consensus 5 ~~~~r~~~aEfigT~~lvf~~~~~~~~~~~~~~~~~~~~~~~~~~ial~~g~~~~~~i~~~~~iSGaH~NPaVTla~~l~ 84 (227)
T PF00230_consen 5 PSLWRKFLAEFIGTFLLVFFGCGSVAALNGSTSSSGSDVSGGWLQIALAWGLALAALIYAFGPISGAHFNPAVTLAFALT 84 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSTTSTTSSHHHHHHHHHHHHHHHHHHHHHHHHHTSS-SHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccHHHHHHHHHHhhhhhhhhhhhccccccccchhhheeee
Confidence 46789999999999999998877432 11111 0 1 223456888888888889999999999999997776
Q ss_pred cCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 190 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 190 ~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
.+ .+|.+...|+++|++|+++|+.+.+.++++.
T Consensus 85 g~--~~~~~~~~Yi~aQ~lGa~~g~~l~~~~~~~~ 117 (227)
T PF00230_consen 85 GR--ISWKKAIVYIIAQFLGAFLGALLVYALYPDS 117 (227)
T ss_dssp TS--SSHHHHHHHHHHHHHHHHHHHHHHHHHSTHH
T ss_pred ee--ecccceeeEEeeccccccccccchhhcccCc
Confidence 44 4788899999999999999999988888774
No 31
>PRK11562 nitrite transporter NirC; Provisional
Probab=84.74 E-value=26 Score=30.60 Aligned_cols=160 Identities=11% Similarity=0.002 Sum_probs=85.1
Q ss_pred ChHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcC---CCCC-----------CCCCCcchHHHHHHHHHH
Q 026600 68 NPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP---QIGR-----------GPSLNVGIHHGALTEGLL 133 (236)
Q Consensus 68 NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~---~~~~-----------~~~~~~~~~~~~~~E~~~ 133 (236)
|=.....-++.||. +|++.+-.+.-=.+|=++|+.+.-.++. +... .-..+.+..+.|+-=.+|
T Consensus 83 n~~~~~~~~~~~~~--s~~~~lr~w~iv~~GNliGa~~~A~l~~~~~~~~~~~~~~~~~~ia~~K~~~~~~~~f~~gI~C 160 (268)
T PRK11562 83 HTMFLTFGVKAGTI--SHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC 160 (268)
T ss_pred chHHHHHHHHhCCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 33433345667788 8888877777666666666666544431 1000 001124567788888888
Q ss_pred HHHHHHHHHhhhccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCC--CCCC---cceeh-hhhhH
Q 026600 134 TFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH--ITKE---HILVY-WLAPI 207 (236)
Q Consensus 134 T~~Lv~~il~~~~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~--~~~~---~~wvy-~v~P~ 207 (236)
.++.++.++.....+. .-.-+.+-+.+++-+ ...+.-...|-- -+...++.+.. ..|. +.+++ .+|-+
T Consensus 161 NwLVclavw~~~~~~~---~gKi~~i~~pI~~Fv--~~GFEH~IANm~-~~~l~~~~~~~~~~~~~~~~~nlipvtLGNi 234 (268)
T PRK11562 161 NWLVCLAIWMAIRTEG---AAKFIAIWWCLLAFI--ASGYEHSVANMT-LFALSWFGHHSEAYTLAGIGHNLLWVTLGNT 234 (268)
T ss_pred HHHHHHHHHHHHhccc---cchhHHHHHHHHHHH--HcCCcchhHhHH-HHHHHHHccCchhhhHHHHHHHHHHHHHHHH
Confidence 8888888876544221 122333333333333 233444445532 33333332210 1111 12222 46778
Q ss_pred HHH-HHHHHHHHHhcCCcccccccCcccC
Q 026600 208 QAT-VIALWLFKLVVRPLAEEKKDSKSKS 235 (236)
Q Consensus 208 lGa-~~a~~~y~~l~~~~~~~~~~~k~~~ 235 (236)
+|+ ++-++.|.+.++++.+++|.+-+|.
T Consensus 235 vGG~v~vg~~y~~~~~~~~~~~~~~~~~~ 263 (268)
T PRK11562 235 LSGAVFMGLGYWYATPKANRPVAAKFNQT 263 (268)
T ss_pred HHHHHHHHHHHHHHhCCCcCchhhhHhhh
Confidence 877 4666788888888877666544443
No 32
>PF04632 FUSC: Fusaric acid resistance protein family; InterPro: IPR006726 This entry represents the p-hydroxybenzoic acid efflux pump subunit AaeB (pHBA efflux pump protein B) whose substrates are p-hydroxybenzoic acid (pHBA), 6-hydroxy-2-naphthoic and 2-hydroxycinnamate. It could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell []. This family also includes fusaric acid resistance proteins [], which are likely to be membrane transporter proteins, and uncharacterised transporter YdhK.; GO: 0006810 transport, 0005886 plasma membrane
Probab=84.35 E-value=42 Score=32.58 Aligned_cols=148 Identities=18% Similarity=0.140 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHhcccCCcccChHHHH-HHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcch
Q 026600 45 CGLSIISMFLFAFLGKVTKGGAYNPLTVL-ASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGI 123 (236)
Q Consensus 45 ~g~~~~~~~~i~~~g~iS~Gah~NPavTl-a~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~ 123 (236)
..++++..+.+|..-.-. +|+.-...+. ..++....++|.+....++...++|+.+|..+.+.++|.- +
T Consensus 346 a~la~~~~~l~Wi~t~W~-~G~~~~~~~~v~~~lfa~~~~P~~~~~~~~~G~l~~~~~a~~~~~~vlP~~--------~- 415 (650)
T PF04632_consen 346 AFLAILIAGLFWIATGWP-SGATAVMMAAVVSSLFATLDNPAPALRLFLIGALLGAVLAFLYLFFVLPHL--------D- 415 (650)
T ss_pred HHHHHHHHHHHHHHcCCC-hhHHHHHHHHHHHHHHcCCcChHHHHHHHHHHHHHHHHHHHHHHHHhhhcc--------C-
Confidence 333333333344443334 5665544432 2223445566999999999999999999999999999854 1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehh
Q 026600 124 HHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYW 203 (236)
Q Consensus 124 ~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~ 203 (236)
. +.++...+...+........+|+ ......++.+....+. .+......|++.-+- . .
T Consensus 416 --~-f~~L~l~l~~~l~~~~~~~~~p~---~~~~g~~~~v~f~~~~-~~~n~~~~d~~~f~n-----~-----------~ 472 (650)
T PF04632_consen 416 --G-FPLLALVLAPFLFLGGLLMARPR---TAYIGLGFAVFFLLLL-GPGNPYSYDFATFLN-----R-----------A 472 (650)
T ss_pred --c-HHHHHHHHHHHHHHHHHHHcCch---HHHHHHHHHHHHHHHh-cCCCCCCCCHHHHHH-----H-----------H
Confidence 1 11222222222222222222222 3334444444433333 333445566654222 1 3
Q ss_pred hhhHHHHHHHHHHHHHhcCCcc
Q 026600 204 LAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 204 v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
++-++|..++.+.++++.+.+.
T Consensus 473 la~l~G~~~a~l~~~li~p~~~ 494 (650)
T PF04632_consen 473 LAILLGIVIAALVFRLIRPFSP 494 (650)
T ss_pred HHHHHHHHHHHHHHHHHCCCCh
Confidence 5778899999999998866654
No 33
>PF01384 PHO4: Phosphate transporter family; InterPro: IPR001204 The PHO-4 family of transporters includes the phosphate-repressible phosphate permease (PHO-4) from Neurospora crassa which is probably a sodium-phosphate symporter []. This family also includes the human leukemia virus receptor.; GO: 0005315 inorganic phosphate transmembrane transporter activity, 0006817 phosphate ion transport, 0016020 membrane
Probab=83.54 E-value=30 Score=31.00 Aligned_cols=138 Identities=12% Similarity=0.007 Sum_probs=65.7
Q ss_pred HHHHHHHHcCCCCchhhHHHHHHHHHHHHHHH-HHHHHHHhcCCCC----CCCCCCcchHHHHHHHHHHHHHHHHHHHhh
Q 026600 70 LTVLASGISGDFSNFLFTVGARIPAQVIGSIT-GVRFILDTFPQIG----RGPSLNVGIHHGALTEGLLTFAIVTISLGL 144 (236)
Q Consensus 70 avTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~ 144 (236)
+-.++..+.-|.-.+.+-.+.--+++++|+++ |..+...+-..-. ..+++......++++=.+.+.+.++....
T Consensus 7 an~~gt~Vgs~al~~~~A~ila~i~~~lGa~l~G~~V~~ti~~~iv~~~~~~~~~~~~~~~~~~~al~~a~iw~~i~t~- 85 (326)
T PF01384_consen 7 ANSFGTAVGSRALTPRQALILAAIFNFLGALLFGTAVAETIGKGIVDPSYFTVDDPQILMIGMLAALLAAAIWLLIATW- 85 (326)
T ss_pred HHHHHHHHhcCccCHHHHHHHHHHHHHhHHHHhhHHHHHHHHhccccccccccccchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 33444444433322445556677899999999 5555554443211 11111101122233333333332222211
Q ss_pred hccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 145 ARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 145 ~~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
.+-| .......+|-.+.+.....+ -...|....+..-+. . .++.|+++.+++..+|+.+.+-.
T Consensus 86 -~glP--vStThalvGal~G~~l~~~g---~~~v~w~~~~~~I~~-~----------wv~sPlia~~~a~~l~~~~~~~~ 148 (326)
T PF01384_consen 86 -LGLP--VSTTHALVGALIGAGLASGG---FSAVNWSKGLLKIVL-S----------WVISPLIAFILAYILYRLIRRIF 148 (326)
T ss_pred -hCCC--chHHHHHHHHHHHHHHHHhh---hhhchHHHHHHHHHH-H----------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112 12233455665555443331 135566533332222 1 26899999999999998765444
Q ss_pred c
Q 026600 225 A 225 (236)
Q Consensus 225 ~ 225 (236)
.
T Consensus 149 ~ 149 (326)
T PF01384_consen 149 L 149 (326)
T ss_pred H
Confidence 3
No 34
>COG0306 PitA Phosphate/sulphate permeases [Inorganic ion transport and metabolism]
Probab=70.52 E-value=82 Score=28.40 Aligned_cols=142 Identities=17% Similarity=0.134 Sum_probs=72.8
Q ss_pred CcccChHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHH-HHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHH
Q 026600 64 GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGV-RFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISL 142 (236)
Q Consensus 64 Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il 142 (236)
|+|=+ |-.++..+..|--.+.+-.+.--+..++|++++. -+.+-+..+- -.|. ..+. .+..|.+...++--.+.
T Consensus 20 Gand~-ana~gtaVgs~alt~~~Av~laavf~f~Ga~l~g~~V~~TI~~~i-v~~~-~~~~--~~~~~~~~aaLlaa~~w 94 (326)
T COG0306 20 GANDT-ANAVGTAVGSGALTPRQAVLLAAVFNFLGALLGGGNVAETIGSGI-VDPG-LLND--SLTPAGVLAALLAAILW 94 (326)
T ss_pred cccch-hhhhhhhhccCCccHHHHHHHHHHHHHHHHHHcCccHHHHHhcCC-CCch-hccc--hhhHHHHHHHHHHHHHH
Confidence 77766 7777777765542234455556678889977766 3444443221 1111 1122 34555555555544443
Q ss_pred hhhcc-CCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhc
Q 026600 143 GLARK-IPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVV 221 (236)
Q Consensus 143 ~~~~~-~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~ 221 (236)
..... ..-+.....-.+|-.+.+.....+. .+.-..++.-+. .+++.|++|..++.++|+.+.
T Consensus 95 ~~ia~~~GiP~StshaiiGaiiG~gla~~~~-----~~~~~~~~~Iv~-----------swvlsPii~~~ia~~l~~~~~ 158 (326)
T COG0306 95 NLIATYLGIPVSTSHALIGAIIGAGLALGGG-----VVDWGVLGKIVA-----------SWVLSPILGGVLAYLLYSLLR 158 (326)
T ss_pred HHHHHHcCCchhHHHHHHHHHHHHHHHHccc-----chhHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 33221 1111122334556655554433221 333333332221 126899999999999998876
Q ss_pred CCccc
Q 026600 222 RPLAE 226 (236)
Q Consensus 222 ~~~~~ 226 (236)
+...+
T Consensus 159 ~~~~~ 163 (326)
T COG0306 159 RLIVG 163 (326)
T ss_pred HHHhc
Confidence 55444
No 35
>PRK15086 ethanolamine utilization protein EutH; Provisional
Probab=52.41 E-value=14 Score=33.74 Aligned_cols=59 Identities=19% Similarity=0.237 Sum_probs=41.5
Q ss_pred CCCcchHhHHHHHHhcCCCCC------CCcceehhhhhHHHHHHHHHHHHHhcCCcccccccCcc
Q 026600 175 GGCMNPASVMGWAYARGDHIT------KEHILVYWLAPIQATVIALWLFKLVVRPLAEEKKDSKS 233 (236)
Q Consensus 175 G~~lNPAr~lg~~~~~~~~~~------~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~~~k~ 233 (236)
|=.+|-|-+.+-+.+-|+|-. .+....++++=++|+++|..+-.++.+++.++.|+.+.
T Consensus 304 gKvin~AFaVs~Afv~GdhLGFta~~~p~mI~p~iigKL~~Gi~Ai~~A~~~~~~~~~~~~~~~~ 368 (372)
T PRK15086 304 GKVINVAFAVSAAFVLGDHLGFTAGVQPTMIFPMIVGKLIGGITAIGVAILLSVKKAAALEKTEA 368 (372)
T ss_pred ccEEeehhhhhHHHHhcccccccccCCcchhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHhhhhh
Confidence 445677777777777765332 34567789999999999988877777776654444433
No 36
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=49.39 E-value=5 Score=30.38 Aligned_cols=18 Identities=22% Similarity=0.252 Sum_probs=16.1
Q ss_pred CcccChHHHHHHHHcCCC
Q 026600 64 GGAYNPLTVLASGISGDF 81 (236)
Q Consensus 64 Gah~NPavTla~~~~g~~ 81 (236)
+||+||.+.++..+.++-
T Consensus 9 ~Ghv~P~lala~~L~~rG 26 (139)
T PF03033_consen 9 RGHVYPFLALARALRRRG 26 (139)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHhccC
Confidence 899999999999998653
No 37
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=48.11 E-value=17 Score=34.53 Aligned_cols=31 Identities=13% Similarity=0.274 Sum_probs=25.9
Q ss_pred cceehhhhhHHHHHHHHHHHHHhcCCccccc
Q 026600 198 HILVYWLAPIQATVIALWLFKLVVRPLAEEK 228 (236)
Q Consensus 198 ~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~ 228 (236)
+.|-|++.+.+|.+++.++.-+...|+.+++
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga~ 217 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGAR 217 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccccc
Confidence 6899999999999999888888777776433
No 38
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=36.74 E-value=77 Score=29.32 Aligned_cols=31 Identities=6% Similarity=0.036 Sum_probs=17.4
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 195 TKEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 195 ~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
++++.|..++---+-. +..+.+-.+++|+.+
T Consensus 387 ~f~~l~~lili~~~~~-ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 387 DFSNLWLLILICSVIQ-LLPLPLLFLLPPQKR 417 (433)
T ss_pred cccchHHHHHHHHHHH-HHHHHHHHHcCCCch
Confidence 5777776554433333 344555556677554
No 39
>PF09163 Form-deh_trans: Formate dehydrogenase N, transmembrane; InterPro: IPR015246 The transmembrane domain of the beta subunit of formate dehydrogenase consists of a single transmembrane helix. This domain acts as a transmembrane anchor, allowing the conduction of electrons within the protein []. ; PDB: 1KQG_B 1KQF_B.
Probab=31.20 E-value=55 Score=20.47 Aligned_cols=26 Identities=31% Similarity=0.333 Sum_probs=14.7
Q ss_pred hhHHHHHHHHHHHHHhcCCccccccc
Q 026600 205 APIQATVIALWLFKLVVRPLAEEKKD 230 (236)
Q Consensus 205 ~P~lGa~~a~~~y~~l~~~~~~~~~~ 230 (236)
.-+.++.++++++.....|+..++|+
T Consensus 18 ~~~~~~~~~~~~Hyi~vGPn~v~ee~ 43 (44)
T PF09163_consen 18 AGMGATAAAGFFHYITVGPNRVEEED 43 (44)
T ss_dssp HHHHHHHHHHHHHHHHH--B-S-SST
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCcCC
Confidence 44566777777777778888765543
No 40
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=26.75 E-value=28 Score=31.36 Aligned_cols=20 Identities=15% Similarity=0.223 Sum_probs=16.4
Q ss_pred hcccCCcccChHHHHHHHHcC
Q 026600 59 GKVTKGGAYNPLTVLASGISG 79 (236)
Q Consensus 59 g~iS~Gah~NPavTla~~~~g 79 (236)
+.-+ |||+.||+.++-.+..
T Consensus 8 ~GGT-GGHi~Pala~a~~l~~ 27 (352)
T PRK12446 8 GGGS-AGHVTPNLAIIPYLKE 27 (352)
T ss_pred cCCc-HHHHHHHHHHHHHHHh
Confidence 3335 8999999999998874
No 41
>PRK04125 murein hydrolase regulator LrgA; Provisional
Probab=22.24 E-value=65 Score=25.39 Aligned_cols=31 Identities=19% Similarity=0.206 Sum_probs=19.4
Q ss_pred hhhhHHHHHHHHHHHHHhcCCcccccccCcc
Q 026600 203 WLAPIQATVIALWLFKLVVRPLAEEKKDSKS 233 (236)
Q Consensus 203 ~v~P~lGa~~a~~~y~~l~~~~~~~~~~~k~ 233 (236)
.++.++.-...+++.+++.+.+.+.+||.|.
T Consensus 99 vvSTllvl~vtg~v~~~l~r~~~~~~~~~~~ 129 (141)
T PRK04125 99 IVATILLLACTGLFSQFILGKTEKEKEDKKE 129 (141)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccchh
Confidence 4566666666777778877766554444443
No 42
>PRK10631 p-hydroxybenzoic acid efflux subunit AaeB; Provisional
Probab=22.01 E-value=7.9e+02 Score=24.44 Aligned_cols=126 Identities=12% Similarity=0.031 Sum_probs=73.0
Q ss_pred CcccChHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHh
Q 026600 64 GGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIGRGPSLNVGIHHGALTEGLLTFAIVTISLG 143 (236)
Q Consensus 64 Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~ 143 (236)
++-...+|..+++.+-.- |.+...-+...+++|..+|....+.++|.- .+.|..-++.-..+. .+.+
T Consensus 380 ~a~~~aAV~~~LfA~~~n--P~~~~~~fl~Gtl~a~~~a~l~~f~vLP~i----------~~~f~lL~laLap~~-~~~g 446 (652)
T PRK10631 380 GAMVMIAVVTSLAMRLPN--PRMVAIDFLYGTLAALPLGALYFMVIIPNT----------QQSMLLLCISLGVLG-FFIG 446 (652)
T ss_pred HHHHHHHHHHHHHhCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------cccHHHHHHHHHHHH-HHHH
Confidence 366777887777776654 878889999999999999999999999853 112222222222221 1122
Q ss_pred hhccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 144 LARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 144 ~~~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
...+++ ....+|+.+..+.+. +...-...||+.-+ .+ -++.++|..++.+.++++ +|
T Consensus 447 ~~~~~~-----~~~~lg~~i~f~~~l-~l~n~~~~d~~~Fl-----N~-----------alA~v~Gi~~A~l~f~li-rp 503 (652)
T PRK10631 447 IEVQKR-----RLGSLGALASTINIL-VLDNPMTFHFSQFL-----DS-----------ALGQIVGCFLALIVILLV-RD 503 (652)
T ss_pred HHhccc-----HHHHHHHHHHHHHHh-ccCCCCCcCHHHHH-----HH-----------HHHHHHHHHHHHHHHHHh-CC
Confidence 222221 111455555554333 22233445555322 22 257888999998888554 55
Q ss_pred cc
Q 026600 224 LA 225 (236)
Q Consensus 224 ~~ 225 (236)
..
T Consensus 504 ~~ 505 (652)
T PRK10631 504 NS 505 (652)
T ss_pred CC
Confidence 53
No 43
>PRK10805 formate transporter; Provisional
Probab=21.82 E-value=5.5e+02 Score=22.56 Aligned_cols=76 Identities=11% Similarity=0.006 Sum_probs=45.3
Q ss_pred ChHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhc--CCCC-CC-------------CCCCcchHHHHHHHH
Q 026600 68 NPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTF--PQIG-RG-------------PSLNVGIHHGALTEG 131 (236)
Q Consensus 68 NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~--~~~~-~~-------------~~~~~~~~~~~~~E~ 131 (236)
|-..+++ .+.||. +|++.+-.+.-=.+|=++|+.+.-.+. .... .. -..+.+..+.|+-=.
T Consensus 93 n~l~~~~-~~~~~~--~~~~~lr~w~iv~~GNliGal~~a~l~~~s~~~~~~~~~~~~~~~~~a~~K~~~~~~~~f~~gI 169 (285)
T PRK10805 93 TVLIVVA-KASGRI--TWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGI 169 (285)
T ss_pred hHHHHHH-HHcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCccHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 6665544 678888 888888555555555555555543332 1100 00 011346778888888
Q ss_pred HHHHHHHHHHHhhhc
Q 026600 132 LLTFAIVTISLGLAR 146 (236)
Q Consensus 132 ~~T~~Lv~~il~~~~ 146 (236)
+|.++.++.++....
T Consensus 170 ~CN~lVclaV~~~~~ 184 (285)
T PRK10805 170 LANLMVCLAVWMSYS 184 (285)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888875443
No 44
>PF10710 DUF2512: Protein of unknown function (DUF2512); InterPro: IPR019649 Proteins in this entry are predicted to be integral membrane proteins, and many of them are annotated as being YndM protein. They are all found in Firmicutes. The true function is not known.
Probab=21.33 E-value=4e+02 Score=20.74 Aligned_cols=65 Identities=18% Similarity=0.167 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCccchhhHhHHHHHHHHHHhc-----CCCCCCcchHhHHHHHHhc
Q 026600 123 IHHGALTEGLLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGS-----DMTGGCMNPASVMGWAYAR 190 (236)
Q Consensus 123 ~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~~~p~~iG~~v~~~~~~~~-----~~tG~~lNPAr~lg~~~~~ 190 (236)
...+++.-++.+.+....++..-.+ .+....+.+++.++...+..| +.+|...=-.-|++.+...
T Consensus 3 hv~aLliKf~~~~ivl~i~L~~~~~---~sf~~~l~~sl~ltvvaY~iGDl~ILPr~gN~~AtiaD~~La~~~ 72 (136)
T PF10710_consen 3 HVKALLIKFVMTIIVLYIILGLFFG---ASFGDILLISLVLTVVAYLIGDLFILPRTGNIVATIADFGLAFLV 72 (136)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHHHHHHHHheeeCCCChhHHHHHHHHHHHH
Confidence 3567888888888888888776543 224456677777777776555 3466555556666666643
No 45
>PRK11404 putative PTS system transporter subunits IIBC; Provisional
Probab=21.21 E-value=50 Score=31.39 Aligned_cols=33 Identities=6% Similarity=0.082 Sum_probs=26.1
Q ss_pred cceehhhhhHHHHHHHHHHHHHhcCCccccccc
Q 026600 198 HILVYWLAPIQATVIALWLFKLVVRPLAEEKKD 230 (236)
Q Consensus 198 ~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~~ 230 (236)
+.|.|+++=++|+++.++++.++.+...++|||
T Consensus 440 ~~~~~~~~~~vG~~v~a~~~~~~k~~~~~~~~~ 472 (482)
T PRK11404 440 PVGSFYLVLAIGLALNISFIIVLKGLWLRRKAK 472 (482)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhHhhhhhHH
Confidence 457799999999999999998887666654444
No 46
>PRK14213 camphor resistance protein CrcB; Provisional
Probab=21.08 E-value=1.9e+02 Score=21.88 Aligned_cols=28 Identities=14% Similarity=0.027 Sum_probs=23.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 026600 84 FLFTVGARIPAQVIGSITGVRFILDTFP 111 (236)
Q Consensus 84 ~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 111 (236)
++.++..|+..+++++++++.+-+.+.|
T Consensus 91 ~~~~a~~y~~~s~~~gl~a~~~G~~l~~ 118 (118)
T PRK14213 91 RVKESILYIALTLAGSLLAFWCGWTIIP 118 (118)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6788999999999999999887665543
No 47
>TIGR02587 putative integral membrane protein TIGR02587. Members of this family are found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus in a conserved two-gene neighborhood. This family, as defined, includes some members of COG4711 but is narrower and strictly bacterial. Members appear to span the membrane seven times.
Probab=20.95 E-value=4.9e+02 Score=22.87 Aligned_cols=65 Identities=12% Similarity=0.034 Sum_probs=45.6
Q ss_pred HHHHHHcCCC--CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCC--CCCC-CcchHHHHHHHHHHHHH
Q 026600 72 VLASGISGDF--SNFLFTVGARIPAQVIGSITGVRFILDTFPQIGR--GPSL-NVGIHHGALTEGLLTFA 136 (236)
Q Consensus 72 Tla~~~~g~~--~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~~--~~~~-~~~~~~~~~~E~~~T~~ 136 (236)
++.+++.|++ .+||.+.+-+++.|-+=+-+|+++.+...+++-. .+++ +.+..++.+.|..+|.+
T Consensus 84 ~~~L~lfgri~~~~pl~e~Lg~vivl~vP~sIGaAlaR~~L~~~~~~~~~~~~~~~~~~~~l~dl~~~~~ 153 (271)
T TIGR02587 84 AAMLWLFGIITPETSLKEIVGKVAFQGVPFSLGAALARQQLGDTNQNNSLSEGKQNSEYGYLAELFAMLV 153 (271)
T ss_pred HHHHHHHccCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHhCCCcCccccchhhhcchhhhHHHHHHHHH
Confidence 3445566765 2389999999999999999999999999864421 1111 22446677778777664
No 48
>PRK09765 PTS system 2-O-a-mannosyl-D-glycerate specific transporter subunit IIABC; Provisional
Probab=20.86 E-value=8.1e+02 Score=24.13 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=25.2
Q ss_pred HHHHHHHHHhcccCCcccChHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 026600 50 ISMFLFAFLGKVTKGGAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDT 109 (236)
Q Consensus 50 ~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~ 109 (236)
+..+..|.+++- ..+||..-.++.... . -+.++|++++..++-++
T Consensus 350 l~a~iA~sia~k---~g~~pg~~~g~~a~~-~-----------~sgflg~Ii~~~l~gyv 394 (631)
T PRK09765 350 LAAYTAYSLADK---PALAPGFAAGLAANM-I-----------GSGFLGAVVGGLIAGYL 394 (631)
T ss_pred HHHHHHHHHhcc---cCcCchhHHHHHHHh-c-----------CCccHHHHHHHHHHHHH
Confidence 344444444443 478897766654321 1 15667777776665554
No 49
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=20.44 E-value=5.9e+02 Score=22.30 Aligned_cols=154 Identities=14% Similarity=0.064 Sum_probs=81.8
Q ss_pred ChHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhc--CC-CCCC-------------CCCCcchHHHHHHHH
Q 026600 68 NPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTF--PQ-IGRG-------------PSLNVGIHHGALTEG 131 (236)
Q Consensus 68 NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~--~~-~~~~-------------~~~~~~~~~~~~~E~ 131 (236)
|=-.+..-...+++ +|++.+--++-=.+|=++|+.++..++ +. .... -..+.+..|.|.--.
T Consensus 89 n~m~~t~~~~~k~I--s~~~ll~~w~~v~lgNliGa~~~a~l~~~~g~~~~~~~~~~~~~~~~a~~K~~~t~~~~F~~GI 166 (265)
T COG2116 89 NTMLLTVGVLSKKI--SWGQLLRNWLVVYLGNLIGALFVALLFHLSGFNLTANGQWGLFVLGVAEHKLHHTFLEAFAKGI 166 (265)
T ss_pred chhHHHHHHHhCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccchhHHHHHHHHHHhcCchHHHHHHHHH
Confidence 33334444566788 888888777777777777777766554 11 0010 111335677788778
Q ss_pred HHHHHHHHHHHhhhccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCc-ceehh----hhh
Q 026600 132 LLTFAIVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH-ILVYW----LAP 206 (236)
Q Consensus 132 ~~T~~Lv~~il~~~~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~-~wvy~----v~P 206 (236)
++..+.++.++..-.-| +...+-+.+-+-+ ..++...+.-...|-..-- +.....+...|.+ .|--+ +|-
T Consensus 167 ~cN~lVclAvwm~~~~k--~~~~K~~~m~~pv--~~Fv~~GfeH~VANm~~i~-~~~~~~~~~~~~~fi~~Nlipv~lGN 241 (265)
T COG2116 167 LCNWLVCLAVWMSYSAK--DGAAKIFAIILPV--MLFVASGFEHSVANMFMIP-WAAVFSGALTWADFILKNLIPVTLGN 241 (265)
T ss_pred HHHHHHHHHHHHHhccc--chhhHHHHHHHHH--HHHHHcCCceeeehHHHHH-HHHHcCChhhhHHHHHHHHHHHHHhc
Confidence 88888888777664421 1122333333333 3334445555566644322 2232222234444 22222 344
Q ss_pred HHH-HHHHHHHHHHhcCCccccc
Q 026600 207 IQA-TVIALWLFKLVVRPLAEEK 228 (236)
Q Consensus 207 ~lG-a~~a~~~y~~l~~~~~~~~ 228 (236)
++| +++-++.|.++++++.+.|
T Consensus 242 ivGG~v~vgl~Y~~~~~~~~~~~ 264 (265)
T COG2116 242 IVGGAVFVGLMYWYLYRKQNRYK 264 (265)
T ss_pred hhcchhhhhHHHHHhcccccccC
Confidence 444 4455677877776665543
No 50
>PRK10290 superoxide dismutase; Provisional
Probab=20.33 E-value=41 Score=27.47 Aligned_cols=9 Identities=33% Similarity=0.770 Sum_probs=7.4
Q ss_pred cCCcccChH
Q 026600 62 TKGGAYNPL 70 (236)
Q Consensus 62 S~Gah~NPa 70 (236)
|.|+||||.
T Consensus 88 sAGgHfNP~ 96 (173)
T PRK10290 88 AAGGHLDPQ 96 (173)
T ss_pred ccCCccCCC
Confidence 459999995
Done!