Query 026600
Match_columns 236
No_of_seqs 180 out of 1480
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 17:28:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 6.8E-56 2.3E-60 374.3 21.6 214 2-223 2-223 (223)
2 3iyz_A Aquaporin-4; water tran 100.0 8.4E-56 2.9E-60 390.5 22.6 217 2-226 50-274 (340)
3 2zz9_A Aquaporin-4; water tran 100.0 4.9E-55 1.7E-59 382.3 20.0 219 2-228 11-237 (301)
4 2w2e_A AQY1, aquaporin, aquapo 100.0 4.1E-54 1.4E-58 373.8 22.9 220 3-229 44-272 (279)
5 1j4n_A Aquaporin 1; membrane p 100.0 5.2E-54 1.8E-58 372.3 21.8 216 2-225 9-237 (271)
6 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 5.8E-54 2E-58 370.7 21.5 214 2-226 10-231 (266)
7 1ldf_A Glycerol uptake facilit 100.0 5.9E-54 2E-58 374.0 19.4 219 2-226 6-260 (281)
8 2f2b_A Aquaporin AQPM; protein 100.0 4.3E-53 1.5E-57 362.4 24.4 217 1-222 2-245 (246)
9 3cn5_A Aquaporin; membrane pro 100.0 6.5E-54 2.2E-58 375.9 19.5 220 2-226 59-292 (304)
10 2o9g_A Aquaporin Z; integral m 100.0 2.1E-53 7.1E-58 361.6 21.8 214 2-223 3-232 (234)
11 3llq_A Aquaporin Z 2; aquapori 100.0 1.1E-53 3.6E-58 366.4 20.1 212 2-221 28-253 (256)
12 2b6o_A Aquaporin-0, lens fiber 100.0 6.2E-53 2.1E-57 364.1 24.1 214 2-226 8-228 (263)
13 3c02_A Aquaglyceroporin; membr 100.0 8.2E-54 2.8E-58 368.9 16.7 225 2-232 8-253 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.5 5.5E-14 1.9E-18 120.9 10.0 102 122-225 8-112 (263)
15 2f2b_A Aquaporin AQPM; protein 99.4 8E-13 2.7E-17 112.6 10.7 99 2-111 142-245 (246)
16 3llq_A Aquaporin Z 2; aquapori 99.3 3.6E-12 1.2E-16 108.9 8.4 100 122-223 28-133 (256)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.3 3.2E-12 1.1E-16 110.0 7.6 100 122-223 10-112 (266)
18 3c02_A Aquaglyceroporin; membr 99.3 4.6E-12 1.6E-16 108.6 7.8 105 122-228 8-117 (258)
19 2zz9_A Aquaporin-4; water tran 99.3 2.1E-11 7.3E-16 106.4 10.7 103 121-225 10-119 (301)
20 1j4n_A Aquaporin 1; membrane p 99.2 1.4E-11 4.7E-16 106.3 8.3 101 122-224 9-121 (271)
21 3cn5_A Aquaporin; membrane pro 99.2 1.2E-11 4E-16 108.2 7.6 103 122-226 59-169 (304)
22 2o9g_A Aquaporin Z; integral m 99.2 1.5E-11 5.2E-16 103.9 7.8 100 123-224 4-109 (234)
23 1ldf_A Glycerol uptake facilit 99.2 1.1E-11 3.7E-16 107.5 6.7 104 121-226 5-113 (281)
24 3gd8_A Aquaporin-4; proton exc 99.2 2.5E-11 8.5E-16 101.9 8.1 101 122-224 2-109 (223)
25 3iyz_A Aquaporin-4; water tran 99.2 2.7E-11 9.2E-16 106.9 7.4 101 122-224 50-157 (340)
26 2w2e_A AQY1, aquaporin, aquapo 99.2 4.1E-11 1.4E-15 103.7 7.8 102 122-225 43-156 (279)
27 3s2u_A UDP-N-acetylglucosamine 46.3 3.8 0.00013 35.5 -0.3 17 64-80 13-29 (365)
28 4f35_D Transporter, NADC famil 20.1 1.4E+02 0.0049 26.2 5.4 30 152-181 163-192 (449)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-56 Score=374.29 Aligned_cols=214 Identities=24% Similarity=0.251 Sum_probs=184.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC-CCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGH-APSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGD 80 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~ 80 (236)
+++|++++||+||++|+++|+++++...+..+.+. ....++++||+++. ..+++++++| |||+|||||+++++.|+
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~--~~v~~~g~iS-GaHlNPAVTla~~~~g~ 78 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIA--TMVQCFGHIS-GGHINPAVTVAMVCTRK 78 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHH--HHHHHHHHHH-CCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHH--HHHheecccc-cceEcHHHHHHHHHcCC
Confidence 57999999999999999999998774322111111 11267888888874 3489999999 99999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC----C--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC-Ccc
Q 026600 81 FSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG-SFY 153 (236)
Q Consensus 81 ~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~~~ 153 (236)
+ +|+|++.|+++|++||++|+.++|.+++++ + ..++++.+..++++.|+++|++|+++++.++|++++ ...
T Consensus 79 ~--~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~~~~ 156 (223)
T 3gd8_A 79 I--SIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTG 156 (223)
T ss_dssp S--CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSCCCS
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCCccC
Confidence 9 999999999999999999999999999753 2 245667889999999999999999999999886543 235
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
..|+.||+++...+..+++.||++||||||||||++.+ +|+|+||||++|++|+++++++|++++.|
T Consensus 157 ~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 157 SIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 78999999998888888889999999999999999987 79999999999999999999999999876
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=8.4e-56 Score=390.49 Aligned_cols=217 Identities=25% Similarity=0.269 Sum_probs=186.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLG-LGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGD 80 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~ 80 (236)
+++|++++||+|||+|+++||++++...+... .+.....++++||+++. ..+|+++++| |||+|||||+++++.|+
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~--~~v~~~g~IS-GAHlNPAVTlal~l~G~ 126 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIA--TMVQCFGHIS-GGHINPAVTVAMVCTRK 126 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHH--HheeEeeccC-cCeeChHHHHHHHHcCC
Confidence 46899999999999999999999875321111 11111267888988874 4489999999 99999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC------CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC-Ccc
Q 026600 81 FSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG-SFY 153 (236)
Q Consensus 81 ~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~~~ 153 (236)
+ +|++++.|+++|++||++|+++++.+++++. ..+.++.+..++|+.|+++||+|+++++.++|+++. ...
T Consensus 127 ~--~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~~lg~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~~~ 204 (340)
T 3iyz_A 127 I--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG 204 (340)
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcCceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHhhcCccCCccc
Confidence 9 9999999999999999999999999997642 245567789999999999999999999999886532 235
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
..|+.||+++.+..+.++++||++||||||||||++.+ .|+++||||+||++|+++|+++|++++.|+.+
T Consensus 205 ~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~~~WVywvgPiiGailaallY~~l~~p~~~ 274 (340)
T 3iyz_A 205 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDVE 274 (340)
T ss_pred chhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCCcEeehhHHHHHHHHHHHHHHHHHhCCChh
Confidence 68999999998888888899999999999999999987 79999999999999999999999999988765
No 3
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=4.9e-55 Score=382.31 Aligned_cols=219 Identities=25% Similarity=0.257 Sum_probs=182.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC-chhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAP-SGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGD 80 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~ 80 (236)
+++|++++||+||++|+++|+++++...+..+..... ..++++||+++. ..+++++++| |||+|||||+++++.|+
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~--~~v~~~g~iS-GaHlNPAVTla~~~~g~ 87 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIA--TMVQCFGHIS-GGHINPAVTVAMVCTRK 87 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHH--HHHHHHGGGT-CCCCSHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHH--HhhheeccCC-cceeChHHHHHHHHhcC
Confidence 4689999999999999999999876432111111111 257788888874 4489999999 99999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC----C--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC-Ccc
Q 026600 81 FSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG-SFY 153 (236)
Q Consensus 81 ~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~~~ 153 (236)
+ +|++++.|+++|++||++|++++|.+++++ . ..+.++.+..++|+.|+++||+|+++++.++|+++. ...
T Consensus 88 ~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~~~~~~ 165 (301)
T 2zz9_A 88 I--SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDDKRTDVTG 165 (301)
T ss_dssp S--CTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHSCSSSSCCSS
T ss_pred C--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceeeecCCcccchHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc
Confidence 9 999999999999999999999999999764 1 245567789999999999999999999999876433 245
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCccccc
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEK 228 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~ 228 (236)
..|+.||+++.+.++.++++||++||||||||||++.+ .|+++||||++|++|+++|+++|++++.|+.+.+
T Consensus 166 ~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~~l~~~~~~~~ 237 (301)
T 2zz9_A 166 SVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYEYVFCPDVELK 237 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHHTTTC------
T ss_pred hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHHHHhCCchhhh
Confidence 78999999998888888889999999999999999987 7999999999999999999999999987765433
No 4
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=4.1e-54 Score=373.80 Aligned_cols=220 Identities=19% Similarity=0.238 Sum_probs=187.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCCCC-CchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHH
Q 026600 3 GIRLVVSDFILSFMWVWQSVLIKIFVYKVL-----GLGHA-PSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASG 76 (236)
Q Consensus 3 ~~r~~~aEfigT~~lv~~g~~~~~~~~~~~-----~~~~~-~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~ 76 (236)
.+|++++||+||++|+++|++++...+... +.+.. ...++++||+++ +..+|++|++| |||+|||||++++
T Consensus 44 ~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav--~~~v~~~g~iS-GaHlNPAVTla~~ 120 (279)
T 2w2e_A 44 HFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGV--MVGVFITYRVS-GGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHH--HHHHHHHTTTT-CCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHH--HHHHHHHhhcC-ccccChHHHHHHH
Confidence 478899999999999999999754322211 11111 115778888887 44489999999 9999999999999
Q ss_pred HcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC---CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCCCcc
Q 026600 77 ISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQIG---RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPGSFY 153 (236)
Q Consensus 77 ~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~~ 153 (236)
+.|++ +|++++.|+++|++||++|+++++.+++++. ..|.++.+..++++.|+++|++|+++++.+++++++.+.
T Consensus 121 ~~g~~--~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~~~~ 198 (279)
T 2w2e_A 121 LARAI--PPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHRATW 198 (279)
T ss_dssp HTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCSTTGG
T ss_pred HcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccccceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCCCcC
Confidence 99999 9999999999999999999999999998752 256667789999999999999999999999876555556
Q ss_pred chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcccccc
Q 026600 154 MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAEEKK 229 (236)
Q Consensus 154 ~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~~ 229 (236)
..|+.||+++++++++++++||++||||||||||++++. .++|+||||++|++|+++++++|++++..+.++.+
T Consensus 199 ~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~~--~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~~~~ 272 (279)
T 2w2e_A 199 FAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAARS--FPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQTTN 272 (279)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHTC--CCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCSC
T ss_pred cHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhcc--chhhhhHHHHHHHHHHHHHHHHHHHHHccCCCcCC
Confidence 899999999999999999999999999999999999863 45789999999999999999999999877665443
No 5
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=5.2e-54 Score=372.29 Aligned_cols=216 Identities=19% Similarity=0.234 Sum_probs=183.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhh--cC--CCC--CCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHH
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKV--LG--LGH--APSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLAS 75 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~--~~--~~~--~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~ 75 (236)
+++|++++||+||++|+++||++++..... .+ .+. ....++++||+++. ..+|+++++| |||+|||||+++
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~--~~i~~~g~iS-GaHlNPAVTla~ 85 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIA--TLAQSVGHIS-GAHLNPAVTLGL 85 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHH-CCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHH--HHHHHHhcCC-cceEcHHHHHHH
Confidence 468999999999999999999988753211 11 111 11257788888874 3489999999 999999999999
Q ss_pred HHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC----C--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCC
Q 026600 76 GISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIP 149 (236)
Q Consensus 76 ~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~ 149 (236)
++.|++ +|++++.|+++|++||++|+.+++.++++. . ..+.++++..++++.|+++|++|+++++.++|+++
T Consensus 86 ~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~d~~~ 163 (271)
T 1j4n_A 86 LLSCQI--SVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163 (271)
T ss_dssp HHTTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHTCSSC
T ss_pred HHcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhccccC
Confidence 999999 999999999999999999999999998642 1 13445677889999999999999999999988643
Q ss_pred C-CccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcc
Q 026600 150 G-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 150 ~-~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
+ .....|+.||+++.+.++.++++||++||||||||||++++ .|+++|+||++|++|+++++++|++++.++.
T Consensus 164 ~~~~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~la~~~y~~~~~~~~ 237 (271)
T 1j4n_A 164 RDLGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAALAVLIYDFILAPRS 237 (271)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHHHHHHHHHTTTSCCS
T ss_pred CCccccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3 24589999999999888888889999999999999999986 7999999999999999999999999988765
No 6
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.8e-54 Score=370.74 Aligned_cols=214 Identities=22% Similarity=0.259 Sum_probs=184.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+++|++++||+||++|+++|++++.. . .+.......++++||+++ +..+++++++| |||+|||||+++++.|++
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~--~-~~~~~~~l~ial~~Glav--~~~i~~~g~iS-GaHlNPAVTla~~~~g~~ 83 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALK--W-PSALPTILQIALAFGLAI--GTLAQALGPVS-GGHINPAITLALLVGNQI 83 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSC--C-SSSCCCHHHHHHHHHHHH--HHHHHHHHHHH-CCCCCHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC--C-CCCCccHHHHHHHHHHHH--HHHHHHHcccC-cceECHHHHHHHHHhcCC
Confidence 46899999999999999999998742 1 111111125788888887 44489999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC----C--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC-Cccc
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG-SFYM 154 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~~~~ 154 (236)
+|++++.|+++|++||++|+.+++.+++++ . ..|.++.+..++++.|+++|++|+++++.++|++++ ....
T Consensus 84 --~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~ 161 (266)
T 3d9s_A 84 --SLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPVGS 161 (266)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCTTCCSCCCC
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHccccccCceeeccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCccch
Confidence 999999999999999999999999999753 2 245567789999999999999999999999886433 3457
Q ss_pred hhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCc-ceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 155 KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH-ILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 155 ~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~-~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
.|+.||+++.+.++.++++||++||||||||||++++ .|++ +||||++|++|+++++++|++++.|+.+
T Consensus 162 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~ 231 (266)
T 3d9s_A 162 PALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILYFYLLFPNSL 231 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHHHHTTSCCSC
T ss_pred HHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHHHHHhCCCch
Confidence 9999999999999999999999999999999999987 7888 9999999999999999999999887654
No 7
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=5.9e-54 Score=373.97 Aligned_cols=219 Identities=16% Similarity=0.172 Sum_probs=183.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+++|++++||+||++|+++|+++++... ..+.+...+.++++||+++ +..+++++++| |||+|||||+++++.|++
T Consensus 6 ~~~~~~laEflGT~~Lv~~G~g~~~~~~-l~~~~~g~~~ia~~~Glav--~~~i~~~g~iS-GaHlNPAVTla~~~~g~~ 81 (281)
T 1ldf_A 6 TLKGQCIAEFLGTGLLIFFGVGCVAALK-VAGASFGQWEISVIFGLGV--AMAIYLTAGVS-GAHLNPAVTIALWLFACF 81 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH-HSCCCCCHHHHHHHHHHHH--HHHHHHHHHHH-CCCCSHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCCCchHHHHHHHHHHH--HHHhheecccC-cCeeChHHHHHHHHcCCC
Confidence 4689999999999999999999877532 2221112225788888887 44489999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC----------------------C--CCCCCCcchHHHHHHHHHHHHHH
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQI----------------------G--RGPSLNVGIHHGALTEGLLTFAI 137 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~E~~~T~~L 137 (236)
+|++++.|+++|++||++|+.++|.+++++ . ..|.++++..++|+.|+++|++|
T Consensus 82 --~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~Tf~L 159 (281)
T 1ldf_A 82 --DKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAIL 159 (281)
T ss_dssp --CTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998531 0 13556678999999999999999
Q ss_pred HHHHHhhhccCCC--CccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhc---CC-CC------CCCcceehhhh
Q 026600 138 VTISLGLARKIPG--SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYAR---GD-HI------TKEHILVYWLA 205 (236)
Q Consensus 138 v~~il~~~~~~~~--~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~---~~-~~------~~~~~wvy~v~ 205 (236)
+++++.++|++++ .....|+.||+++.++++..+++||++||||||||||+++ |+ .+ +|.|+||||++
T Consensus 160 v~~il~~~d~~~~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~WVy~vg 239 (281)
T 1ldf_A 160 MGLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFLVPLFG 239 (281)
T ss_dssp HHHHHHHHCTTSSSCCGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTHHHHHH
T ss_pred HHHHHHHhccCCCCcccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCceeeHHhHH
Confidence 9999999986543 2458999999999999999999999999999999999986 22 11 22389999999
Q ss_pred hHHHHHHHHHHHHHhcCCccc
Q 026600 206 PIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 206 P~lGa~~a~~~y~~l~~~~~~ 226 (236)
|++|+++++++|++++.++.+
T Consensus 240 Pi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 240 PIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHTGGGC-
T ss_pred HHHHHHHHHHHHHHHhCccCC
Confidence 999999999999999876543
No 8
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=4.3e-53 Score=362.36 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=185.8
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-----------CCCCC-----chhHHHHHHHHHHHHHHHHHhcccCC
Q 026600 1 MAGIRLVVSDFILSFMWVWQSVLIKIFVYKVLG-----------LGHAP-----SGEVFKCGLSIISMFLFAFLGKVTKG 64 (236)
Q Consensus 1 ~~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~-----------~~~~~-----~~~~~~~g~~~~~~~~i~~~g~iS~G 64 (236)
|+++|++++||+||++|+++|+++++...+..+ .+... ..++++||+++ +..+++++++| |
T Consensus 2 ~~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v--~~~v~~~g~iS-G 78 (246)
T 2f2b_A 2 VSLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAI--AASIYALGNIS-G 78 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHH--HHHHHHHTTTT-C
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHH--HHHhheecccc-c
Confidence 678999999999999999999998886432221 10010 12778888887 44489999999 9
Q ss_pred cccChHHHHHHHHcCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC------C--CCCCCCcchHHHHHHHHHHHHH
Q 026600 65 GAYNPLTVLASGISGDFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI------G--RGPSLNVGIHHGALTEGLLTFA 136 (236)
Q Consensus 65 ah~NPavTla~~~~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~------~--~~~~~~~~~~~~~~~E~~~T~~ 136 (236)
||+|||||+++++.|++ +|+|++.|+++|++||++|+.+++.+++++ . ..|.++.+..++++.|+++|++
T Consensus 79 aH~NPAVTla~~~~g~~--~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~ 156 (246)
T 2f2b_A 79 CHINPAVTIGLWSVKKF--PGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFL 156 (246)
T ss_dssp CCCSHHHHHHHHHTTSS--CGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHH
T ss_pred ceeCHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999862 1 2455678899999999999999
Q ss_pred HHHHHHhhhccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHH--hc-CCCCCCCcceehhhhhHHHHHHH
Q 026600 137 IVTISLGLARKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAY--AR-GDHITKEHILVYWLAPIQATVIA 213 (236)
Q Consensus 137 Lv~~il~~~~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~--~~-~~~~~~~~~wvy~v~P~lGa~~a 213 (236)
|+++++.+.++++++....|+.+|+++.+.+++.+++||+++|||||||||+ .. +.++.|+|.|+||++|++|++++
T Consensus 157 Lv~~i~~~~~~~~~~~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~la 236 (246)
T 2f2b_A 157 LMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLA 236 (246)
T ss_dssp HHHHHHHHTTSTTSCTTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHH
T ss_pred HHheeeEEecCCCCCCceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHH
Confidence 9999999876544445689999999999999999999999999999999999 43 44568999999999999999999
Q ss_pred HHHHHHhcC
Q 026600 214 LWLFKLVVR 222 (236)
Q Consensus 214 ~~~y~~l~~ 222 (236)
+++|+++++
T Consensus 237 a~~y~~l~~ 245 (246)
T 2f2b_A 237 ALTYQYLTS 245 (246)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHcC
Confidence 999999875
No 9
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=6.5e-54 Score=375.90 Aligned_cols=220 Identities=19% Similarity=0.233 Sum_probs=185.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC-CCCC-chhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGL-GHAP-SGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISG 79 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~-~~~~-~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g 79 (236)
+++|++++||+||++|+++||++++......+. +... ..++++||+++ +..+|+++++| |||+|||||+++++.|
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav--~~~v~~~g~iS-GaHlNPAVTla~~l~g 135 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMI--FVLVYCTAGIS-GGHINPAVTFGLFLAR 135 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHH--HHHHHHHTTTT-CCCCSHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhh--heeeeEeeccC-CCccCcHHHHHHHHhC
Confidence 468999999999999999999998764322211 1111 25777888877 44489999999 9999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC-------CCCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCCC-C
Q 026600 80 DFSNFLFTVGARIPAQVIGSITGVRFILDTFPQI-------GRGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIPG-S 151 (236)
Q Consensus 80 ~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~ 151 (236)
++ +|++++.|+++|++||++|+++++.+++++ ...+.++.+..++|+.|+++||+|+++++..+|+++. .
T Consensus 136 ~~--~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~ 213 (304)
T 3cn5_A 136 KV--ELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSAR 213 (304)
T ss_dssp SS--CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEEST
T ss_pred CC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccccCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCC
Confidence 99 999999999999999999999999998653 1134567789999999999999999999988875432 2
Q ss_pred cc----chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 152 FY----MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 152 ~~----~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
.. +.|+.||++++++.++++++||++||||||||||++.+....|+++|+||++|++|+++++++|++++.++..
T Consensus 214 ~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~~~ 292 (304)
T 3cn5_A 214 DSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAAAI 292 (304)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCCC-
T ss_pred CcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCCCCC
Confidence 22 7899999999999999999999999999999999985433479999999999999999999999999887643
No 10
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=2.1e-53 Score=361.62 Aligned_cols=214 Identities=18% Similarity=0.288 Sum_probs=181.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+++|++++||+||++|+++||+++....+..+.+.....++++||+++ +..+|+++++| |||+|||||+++++.|++
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v--~~~i~~~g~iS-GaHlNPAVTla~~~~g~~ 79 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTV--LTMAFAVGHIS-GGHFNPAVTIGLWAGGRF 79 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHH--HHHHHHHHHHH-CCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHH--HHHHHHhhccC-cceeCHHHHHHHHHhCCC
Confidence 368999999999999999999987532111111111125778888887 44489999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC--------------C--CCCCCcchHHHHHHHHHHHHHHHHHHHhhh
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQIG--------------R--GPSLNVGIHHGALTEGLLTFAIVTISLGLA 145 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~ 145 (236)
+|+|++.|+++|++||++|+.+++.++++.. + .|. +.+..++++.|+++|++|+++++.++
T Consensus 80 --~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~-~~~~~~~~~~E~i~T~~Lv~~i~~~~ 156 (234)
T 2o9g_A 80 --PAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPG-GYSMLSALVVELVLSAGFLLVIHGAT 156 (234)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCC-ccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999986421 1 233 46789999999999999999999998
Q ss_pred ccCCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 146 RKIPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 146 ~~~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
|++. .+...|+.||+++.++++..+++||++||||||||||+++++ ..|+|+||||++|++|+++++++|++++++
T Consensus 157 d~~~-~~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g~-~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 157 DKFA-PAGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQGG-WALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp STTS-CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCS-HHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCCC-ccchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhCC-CCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 8643 456899999999999999999999999999999999999862 356799999999999999999999999765
No 11
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.1e-53 Score=366.41 Aligned_cols=212 Identities=21% Similarity=0.306 Sum_probs=179.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
.++|++++||+||++|+++||++++......+.+.....++++||+++ +..++++|++| |||+|||||+++++.|++
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav--~~~i~~~g~iS-GaHlNPAVTla~~~~g~~ 104 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTV--LTMAYAVGGIS-GGHFNPAVSVGLTVAGRF 104 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHH--HHHHHHHHHHH-CCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHH--HHHHheeeccc-cceEchHHHHHHHHhcCC
Confidence 468999999999999999999987643222221111125778888887 44589999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCCC------------C--CCCCCcchHHHHHHHHHHHHHHHHHHHhhhcc
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQIG------------R--GPSLNVGIHHGALTEGLLTFAIVTISLGLARK 147 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~ 147 (236)
+|++++.|+++|++||++|+.+++.++++.. + .|. ..+..++|+.|+++|++|+++++.++|+
T Consensus 105 --~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~-~~s~~~~f~~E~i~Tf~Lv~~il~~~d~ 181 (256)
T 3llq_A 105 --PASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPG-GYSLVSALLIEIILTAFFLIVILGSTHG 181 (256)
T ss_dssp --CGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTT-CCCHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCc-ccCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999985320 0 222 4578999999999999999999999886
Q ss_pred CCCCccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhc
Q 026600 148 IPGSFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVV 221 (236)
Q Consensus 148 ~~~~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~ 221 (236)
++ .+...|+.||+++.++.++.+++||++||||||||||++.++ ..|+++||||++|++|+++++++|+++.
T Consensus 182 ~~-~~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g~-~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 182 RV-PAGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVGG-WALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp TS-CTTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHCH-HHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CC-CccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcCC-CcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 53 445899999999999999999999999999999999999862 2467999999999999999999999984
No 12
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=6.2e-53 Score=364.12 Aligned_cols=214 Identities=18% Similarity=0.255 Sum_probs=185.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+.+|++++||+||++|++++++++... .+.......++++||+++. ..+++++++| |+|+|||||+++++.|++
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~---~~~~~~~l~i~l~~Gl~v~--~~i~~~g~iS-GahlNPAVTla~~~~g~~ 81 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRW---APGPLHVLQVALAFGLALA--TLVQAVGHIS-GAHVNPAVTFAFLVGSQM 81 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC---CSSSCHHHHHHHHHHHHHH--HHHHHGGGTT-CCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCcchHHHHHHHHHHHH--HHHHHhhccC-cCeeChHHHHHHHHhcCC
Confidence 468999999999999999999976421 1111111256788888874 3488999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC----C--CCCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCC-CCccc
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQI----G--RGPSLNVGIHHGALTEGLLTFAIVTISLGLARKIP-GSFYM 154 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~----~--~~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~-~~~~~ 154 (236)
+|++++.|+++|++||++|+.+++.+++++ + ..+.++++..++++.|+++|++|+++++.++|+++ .....
T Consensus 82 --~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~d~~~~~~~~~ 159 (263)
T 2b6o_A 82 --SLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGS 159 (263)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTSCSSCCC
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccc
Confidence 999999999999999999999999999764 1 24556778999999999999999999999988643 23468
Q ss_pred hhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 155 KTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 155 ~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
.|+.||+++.++++.++++||++||||||||||++.+ +|+|+||||++|++|+++++++|++++.|+.+
T Consensus 160 ~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l~~~~~~ 228 (263)
T 2b6o_A 160 VALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFLLFPRLK 228 (263)
T ss_dssp HHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 9999999999999999999999999999999999987 79999999999999999999999999887654
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=8.2e-54 Score=368.95 Aligned_cols=225 Identities=16% Similarity=0.178 Sum_probs=183.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHHcCCC
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGISGDF 81 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~~g~~ 81 (236)
+++|++++||+||++|+++||+++++..+.. .+.....++++||+++ +..+++++++| |||+|||||+++++.|++
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~-~~~~~l~ia~~~Glav--~~~i~~~g~iS-GaHlNPAVTla~~~~g~~ 83 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTG-LSGDWYKLCLGWGLAV--FFGILVSAKLS-GAHLNLAVSIGLSSINKF 83 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS-STTCHHHHHHHHHHHH--HHHHHHHHHHH-CCCCSHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCccHHHHHHHHHHHH--HHHHheecccC-cCeeChHHHHHHHHhCCC
Confidence 5689999999999999999999887543211 1111126788888887 44489999999 999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHhcCCC---C------C--CCCCCcchHHHHHHHHHHHHHHHHHHHhhhccCC-
Q 026600 82 SNFLFTVGARIPAQVIGSITGVRFILDTFPQI---G------R--GPSLNVGIHHGALTEGLLTFAIVTISLGLARKIP- 149 (236)
Q Consensus 82 ~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~~~---~------~--~~~~~~~~~~~~~~E~~~T~~Lv~~il~~~~~~~- 149 (236)
+|++++.|+++|++||++|+.+++.+++++ . . ......+..++++.|+++|++|+++++.++|+|+
T Consensus 84 --~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d~~~~ 161 (258)
T 3c02_A 84 --DLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVDENIC 161 (258)
T ss_dssp --CGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred --cHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhCcccC
Confidence 999999999999999999999999998642 0 0 1222345667999999999999999999988643
Q ss_pred -CCccch-hhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcC---CCCCC----CcceehhhhhHHHHHHHHHHHHHh
Q 026600 150 -GSFYMK-TWISSVSKLALHILGSDMTGGCMNPASVMGWAYARG---DHITK----EHILVYWLAPIQATVIALWLFKLV 220 (236)
Q Consensus 150 -~~~~~~-p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~---~~~~~----~~~wvy~v~P~lGa~~a~~~y~~l 220 (236)
..+... |+.||+++.+++++.+++||++||||||||||++++ ..+.| +|+||||++|++|+++++++|+++
T Consensus 162 ~~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la~~~y~~~ 241 (258)
T 3c02_A 162 GKFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVFCQFYDKV 241 (258)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHHHHHHHHH
Confidence 234567 999999999999999999999999999999999873 11234 679999999999999999999999
Q ss_pred cCCcccccccCc
Q 026600 221 VRPLAEEKKDSK 232 (236)
Q Consensus 221 ~~~~~~~~~~~k 232 (236)
+.++.+++|++|
T Consensus 242 ~~~~~~~~~~~~ 253 (258)
T 3c02_A 242 ICPLVDLANNEK 253 (258)
T ss_dssp HHHHHHHC----
T ss_pred hcccCCCccccc
Confidence 887766544444
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.51 E-value=5.5e-14 Score=120.85 Aligned_cols=102 Identities=15% Similarity=0.174 Sum_probs=86.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhccCCC-Ccc--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCc
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARKIPG-SFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH 198 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~~~~-~~~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~ 198 (236)
+..+.++.|+++|++|+++.+....+.+. ... ...+..|+.+++.++..++.||+++|||+++++.+..+ .+|.+
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~--~~~~~ 85 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQ--MSLLR 85 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTC--SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcC--CCHHH
Confidence 56789999999999999999988754211 111 24688899999999999999999999999999999754 47899
Q ss_pred ceehhhhhHHHHHHHHHHHHHhcCCcc
Q 026600 199 ILVYWLAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 199 ~wvy~v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
.|+||++|++|+++++.+++.+++++.
T Consensus 86 ~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 112 (263)
T 2b6o_A 86 AICYVVAQLLGAVAGAAVLYSVTPPAV 112 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 999999999999999999999987654
No 15
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.42 E-value=8e-13 Score=112.59 Aligned_cols=99 Identities=11% Similarity=0.179 Sum_probs=75.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcccChHHHHHHHH----
Q 026600 2 AGIRLVVSDFILSFMWVWQSVLIKIFVYKVLGLGHAPSGEVFKCGLSIISMFLFAFLGKVTKGGAYNPLTVLASGI---- 77 (236)
Q Consensus 2 ~~~r~~~aEfigT~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~~g~iS~Gah~NPavTla~~~---- 77 (236)
+.+|.++.|+++|++|++..++... ++ ..... ...+.+|+.+.. ..++.+++| |+|+|||+|++..+
T Consensus 142 ~~~~~~~~E~i~Tf~Lv~~i~~~~~--~~--~~~~~--~~pl~iGl~v~~--~~~~~g~~T-G~~iNPAr~lgp~l~~~~ 212 (246)
T 2f2b_A 142 SYWQAMLAEVVGTFLLMITIMGIAV--DE--RAPKG--FAGIIIGLTVAG--IITTLGNIS-GSSLNPARTFGPYLNDMI 212 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTT--ST--TSCTT--CHHHHHHHHHHH--HHHHHHHHH-CCCCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHheeeEEec--CC--CCCCc--eeeHHHHHHHHH--HHhcccccC-CCccCHHHHHHHHHHHHH
Confidence 4578999999999999999886422 11 11111 234556666633 367899999 99999999999888
Q ss_pred -cCCCCchhhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 026600 78 -SGDFSNFLFTVGARIPAQVIGSITGVRFILDTFP 111 (236)
Q Consensus 78 -~g~~~~~~~~~~~yi~aQ~lGa~~g~~~~~~~~~ 111 (236)
.++. .|.+.+.|+++|++|+++|+.+.+.+.+
T Consensus 213 ~g~~~--~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 213 FAGTD--LWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHCCC--CGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCC--CcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 3455 8999999999999999999998887764
No 16
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.31 E-value=3.6e-12 Score=108.87 Aligned_cols=100 Identities=18% Similarity=0.177 Sum_probs=81.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhc--cCCCCcc----chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLAR--KIPGSFY----MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT 195 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~--~~~~~~~----~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~ 195 (236)
+..+.++.|+++|++|++....... ++.++.. ...+..|+.+++.+++.++.||+++|||.+++..+..+ .+
T Consensus 28 ~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 105 (256)
T 3llq_A 28 VMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGR--FP 105 (256)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcC--CC
Confidence 5688999999999999998877643 1111111 23478899999999999999999999999999888754 37
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 196 KEHILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 196 ~~~~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
|.....|+++|++|+++++.+.+.+++.
T Consensus 106 ~~~~~~YiiAQ~lGA~~ga~lv~~~~~~ 133 (256)
T 3llq_A 106 ASSLVPYVIAQVAGAIVAAAALYVIATG 133 (256)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999998887754
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.30 E-value=3.2e-12 Score=109.96 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=84.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhccCCCCc-c--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCCCc
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARKIPGSF-Y--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITKEH 198 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~~~~~~-~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~~~ 198 (236)
+..+.++.|+++|++|++.......+..... . ...+..|+.+++.+++.++.||+++|||.+++..+..+ .+|.+
T Consensus 10 ~~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~~~ 87 (266)
T 3d9s_A 10 AFLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQ--ISLLR 87 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSS--SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcC--CCHHH
Confidence 5678999999999999999988765422211 1 24578899999999999999999999999999888654 37889
Q ss_pred ceehhhhhHHHHHHHHHHHHHhcCC
Q 026600 199 ILVYWLAPIQATVIALWLFKLVVRP 223 (236)
Q Consensus 199 ~wvy~v~P~lGa~~a~~~y~~l~~~ 223 (236)
.+.||++|++|+++++.+.+.++++
T Consensus 88 ~~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 88 AFFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999999999988854
No 18
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.29 E-value=4.6e-12 Score=108.58 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=84.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcc---CCCCcc--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARK---IPGSFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK 196 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~---~~~~~~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~ 196 (236)
+..+.++.|+++|++|++........ ...+.. ...+..|+.+++.+++.++.||+++|||.+++..+..+ .+|
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 85 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINK--FDL 85 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCC--CcH
Confidence 56788999999999999986654421 111112 24567789999999999999999999999999888654 478
Q ss_pred CcceehhhhhHHHHHHHHHHHHHhcCCccccc
Q 026600 197 EHILVYWLAPIQATVIALWLFKLVVRPLAEEK 228 (236)
Q Consensus 197 ~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~~~ 228 (236)
.+...||++|++|+++++.+.+.+++++.++.
T Consensus 86 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~ 117 (258)
T 3c02_A 86 KKIPVYFFAQLLGAFVGTSTVYGLYHGFISNS 117 (258)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcchhhhhc
Confidence 99999999999999999999998887765543
No 19
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.27 E-value=2.1e-11 Score=106.35 Aligned_cols=103 Identities=18% Similarity=0.211 Sum_probs=84.8
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhccCC---C--Ccc--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCC
Q 026600 121 VGIHHGALTEGLLTFAIVTISLGLARKIP---G--SFY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH 193 (236)
Q Consensus 121 ~~~~~~~~~E~~~T~~Lv~~il~~~~~~~---~--~~~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~ 193 (236)
.+.++.++.|+++|++|++.......... + ... ...+..|+.+++.+++.++.||+++|||.+++..+..+
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~-- 87 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK-- 87 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcC--
Confidence 35789999999999999999887654211 1 111 24578899999999999999999999999999888654
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHhcCCcc
Q 026600 194 ITKEHILVYWLAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 194 ~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
.+|.....|+++|++|+++|+.+.+.+++++.
T Consensus 88 ~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~ 119 (301)
T 2zz9_A 88 ISIAKSVFYITAQCLGAIIGAGILYLVTPPSV 119 (301)
T ss_dssp SCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCG
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 47999999999999999999999998887654
No 20
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.24 E-value=1.4e-11 Score=106.31 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=81.7
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcc--------CCCC----ccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHh
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARK--------IPGS----FYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA 189 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~--------~~~~----~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 189 (236)
+..+.++.|+++|++|++........ +... .....+..|+.+++.+++.++.||+++|||.+++..+.
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~ 88 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc
Confidence 46788999999999999987765431 1111 11245788899999999999999999999999998886
Q ss_pred cCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 190 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 190 ~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
.+ .+|.....||++|++|+++++.+.+.++.+.
T Consensus 89 g~--~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 121 (271)
T 1j4n_A 89 CQ--ISVLRAIMYIIAQCVGAIVATAILSGITSSL 121 (271)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 54 3788999999999999999999988887543
No 21
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.24 E-value=1.2e-11 Score=108.20 Aligned_cols=103 Identities=19% Similarity=0.218 Sum_probs=83.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcc----CCCCcc----chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARK----IPGSFY----MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDH 193 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~----~~~~~~----~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~ 193 (236)
+..+.++.|+++|++|++........ +.+... ...+..|+.+++.+++.+..||+++|||.+++..+..+
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~-- 136 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARK-- 136 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTS--
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCC--
Confidence 56789999999999999988765431 111111 24577889999999999999999999999999888654
Q ss_pred CCCCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 194 ITKEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 194 ~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
.+|.....|+++|++|+++++.+.+.+++++.+
T Consensus 137 ~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~ 169 (304)
T 3cn5_A 137 VELLRALVYMIAQCLGAICGVGLVKAFMKGPYN 169 (304)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 378889999999999999999999988876644
No 22
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.23 E-value=1.5e-11 Score=103.92 Aligned_cols=100 Identities=18% Similarity=0.184 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhcc-C-CCCc--c--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCCC
Q 026600 123 IHHGALTEGLLTFAIVTISLGLARK-I-PGSF--Y--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHITK 196 (236)
Q Consensus 123 ~~~~~~~E~~~T~~Lv~~il~~~~~-~-~~~~--~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~~ 196 (236)
..|.++.|+++|++|++.......- + .++. . ...+..|+.+++.++..++.||+++|||.+++..+..+ .+|
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~~ 81 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGR--FPA 81 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--SCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCC--CCH
Confidence 5788999999999999987765431 1 1111 1 24578899999999999999999999999999888654 478
Q ss_pred CcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 197 EHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 197 ~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
.+...|+++|++|+++++.+.+.+++++
T Consensus 82 ~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 82 KEVVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 8999999999999999999988888754
No 23
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.22 E-value=1.1e-11 Score=107.53 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=83.7
Q ss_pred cchHHHHHHHHHHHHHHHHHHHhhhc----cCCC-CccchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCCC
Q 026600 121 VGIHHGALTEGLLTFAIVTISLGLAR----KIPG-SFYMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHIT 195 (236)
Q Consensus 121 ~~~~~~~~~E~~~T~~Lv~~il~~~~----~~~~-~~~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~~ 195 (236)
.+..+.++.|+++|++|++....+.. ++.. ......+..|+.+++.+++.++.||+++|||.+++..+..+ .+
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~--~~ 82 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFAC--FD 82 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCC--CC
Confidence 35688999999999999998775432 1111 11124677889999999999999999999999999888755 37
Q ss_pred CCcceehhhhhHHHHHHHHHHHHHhcCCccc
Q 026600 196 KEHILVYWLAPIQATVIALWLFKLVVRPLAE 226 (236)
Q Consensus 196 ~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~~ 226 (236)
|.+...|+++|++|+++++.+.+.+++++.+
T Consensus 83 ~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~ 113 (281)
T 1ldf_A 83 KRKVIPFIVSQVAGAFCAAALVYGLYYNLFF 113 (281)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 8999999999999999999998888876644
No 24
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.21 E-value=2.5e-11 Score=101.88 Aligned_cols=101 Identities=20% Similarity=0.230 Sum_probs=81.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcc---CCCC--cc--chhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARK---IPGS--FY--MKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI 194 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~---~~~~--~~--~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~ 194 (236)
+.+|.++.|+++|++|++........ +.+. .. ...+..|+.+++.+++.++.||+++|||.+++..+..+ .
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~--~ 79 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 79 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTS--S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCC--C
Confidence 35789999999999999988876542 1111 11 24577889999999999999999999999999887654 3
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 195 TKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 195 ~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
+|.+...|+++|++|+++++.+.+.+++++
T Consensus 80 ~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 80 SIAKSVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 788999999999999999999988877654
No 25
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.19 E-value=2.7e-11 Score=106.87 Aligned_cols=101 Identities=19% Similarity=0.229 Sum_probs=81.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhhcc---CCC--Cc--cchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHhcCCCC
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLARK---IPG--SF--YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYARGDHI 194 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~~~---~~~--~~--~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~~~~~~ 194 (236)
+.++.++.|+++|++|++........ +.+ .. ....+..|+.+++.+++.+..||+++|||.+++..+..+ .
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~--~ 127 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRK--I 127 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCC--C
Confidence 45789999999999999988776542 111 11 124577899999999999999999999999999887654 3
Q ss_pred CCCcceehhhhhHHHHHHHHHHHHHhcCCc
Q 026600 195 TKEHILVYWLAPIQATVIALWLFKLVVRPL 224 (236)
Q Consensus 195 ~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~ 224 (236)
.|.....|+++|++|+++|+.+.+.+++++
T Consensus 128 ~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~ 157 (340)
T 3iyz_A 128 SIAKSVFYITAQCLGAIIGAGILYLVTPPS 157 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 788999999999999999999888877654
No 26
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.17 E-value=4.1e-11 Score=103.69 Aligned_cols=102 Identities=18% Similarity=0.106 Sum_probs=81.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhh---ccC-----CCCc----cchhhHhHHHHHHHHHHhcCCCCCCcchHhHHHHHHh
Q 026600 122 GIHHGALTEGLLTFAIVTISLGLA---RKI-----PGSF----YMKTWISSVSKLALHILGSDMTGGCMNPASVMGWAYA 189 (236)
Q Consensus 122 ~~~~~~~~E~~~T~~Lv~~il~~~---~~~-----~~~~----~~~p~~iG~~v~~~~~~~~~~tG~~lNPAr~lg~~~~ 189 (236)
+..+.++.|+++|++|++...... ... .+.. ....+..|+.+++.+++.++.||+++|||.+++..+.
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~ 122 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLA 122 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHc
Confidence 456789999999999998876542 111 0111 1245788999999999999999999999999998886
Q ss_pred cCCCCCCCcceehhhhhHHHHHHHHHHHHHhcCCcc
Q 026600 190 RGDHITKEHILVYWLAPIQATVIALWLFKLVVRPLA 225 (236)
Q Consensus 190 ~~~~~~~~~~wvy~v~P~lGa~~a~~~y~~l~~~~~ 225 (236)
.+ .+|.....|+++|++|+++|+.+.+.+++++.
T Consensus 123 g~--~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~ 156 (279)
T 2w2e_A 123 RA--IPPFRGILMAFTQIVAGMAAAGAASAMTPGEI 156 (279)
T ss_dssp TS--SCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSC
T ss_pred CC--CCHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 54 37888999999999999999999988876543
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=46.26 E-value=3.8 Score=35.47 Aligned_cols=17 Identities=24% Similarity=0.290 Sum_probs=15.0
Q ss_pred CcccChHHHHHHHHcCC
Q 026600 64 GGAYNPLTVLASGISGD 80 (236)
Q Consensus 64 Gah~NPavTla~~~~g~ 80 (236)
|||++||++++-.+..+
T Consensus 13 gGHi~palala~~L~~~ 29 (365)
T 3s2u_A 13 GGHVFPALACAREFQAR 29 (365)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 79999999999988743
No 28
>4f35_D Transporter, NADC family; transport protein; HET: BNG CIT; 3.20A {Vibrio cholerae}
Probab=20.14 E-value=1.4e+02 Score=26.15 Aligned_cols=30 Identities=13% Similarity=-0.181 Sum_probs=18.1
Q ss_pred ccchhhHhHHHHHHHHHHhcCCCCCCcchH
Q 026600 152 FYMKTWISSVSKLALHILGSDMTGGCMNPA 181 (236)
Q Consensus 152 ~~~~p~~iG~~v~~~~~~~~~~tG~~lNPA 181 (236)
+...++.++.......-.....+|..-|.-
T Consensus 163 ~~~~~lll~~~~aa~igg~~t~ig~~~N~i 192 (449)
T 4f35_D 163 STYVFVLLGVAYSASIGGIATLVGSPPNAI 192 (449)
T ss_dssp SSTTTTHHHHHHHHHHHHSSSSSSSHHHHH
T ss_pred hHHHHHHHHHHHHHhhhhhcccCcCCCccc
Confidence 334567777777666555555667655644
Done!