Query 026604
Match_columns 236
No_of_seqs 121 out of 246
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 17:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026604.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026604hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1sqda1 d.32.1.3 (A:14-180) 4- 39.3 25 0.0018 25.1 5.4 45 133-184 113-157 (167)
2 d1eeja2 d.17.3.1 (A:1-60) Disu 27.6 40 0.0029 21.7 4.3 46 146-192 8-55 (60)
3 d1nrva_ d.93.1.1 (A:) Growth f 23.6 97 0.0071 20.7 6.1 45 124-171 3-48 (105)
4 d1rjaa_ d.93.1.1 (A:) Tyrosine 23.3 44 0.0032 22.6 4.1 43 126-170 2-44 (100)
5 d1g83a2 d.93.1.1 (A:142-245) T 23.1 77 0.0056 21.1 5.4 48 124-173 4-51 (104)
6 d1lkka_ d.93.1.1 (A:) p56-lck 19.3 74 0.0054 21.4 4.6 44 126-172 4-48 (105)
7 d1shsa_ b.15.1.1 (A:) Small he 18.0 1.1E+02 0.0082 20.6 5.4 38 152-194 12-50 (115)
8 d1r1qa_ d.93.1.1 (A:) GRB2-rel 17.9 86 0.0063 20.9 4.7 41 125-169 5-45 (97)
9 d2r1jl1 a.35.1.2 (L:3-68) P22 16.5 34 0.0024 21.2 2.0 15 215-229 5-19 (66)
10 d1o48a_ d.93.1.1 (A:) c-src ty 16.4 49 0.0036 22.4 3.0 45 125-171 4-48 (106)
No 1
>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=39.28 E-value=25 Score=25.10 Aligned_cols=45 Identities=20% Similarity=0.103 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHHHCCCcEEEEeecCCCCCeEEEEEeccccCccEEEEE
Q 026604 133 NSTENAIQKLQEAILKTQKNAKIGVVEDTPFGQYLQAEVDGGFGRDVLEFLV 184 (236)
Q Consensus 133 ~s~~~A~~~L~~AvL~s~~~~kIv~~e~~~~g~YL~Ae~~SgF~dDvvEFl~ 184 (236)
.+.++++++|++ .|++++..-.+-.|++..|...+ |+|.++||.-
T Consensus 113 dDi~aa~~~l~~------~G~~~~~~P~~~~~~~~~a~I~~-~gd~~~~~v~ 157 (167)
T d1sqda1 113 EDAESAFSISVA------NGAIPSSPPIVLNEAVTIAEVKL-YGDVVLRYVS 157 (167)
T ss_dssp SCHHHHHHHHHH------TTCCEEEEEEEETTTEEEEEEEE-ETTEEEEEEE
T ss_pred CCHHHHHHHHHH------CCCEEecCCeecCCCEEEEEEEc-cCCcEEEEEe
Confidence 588999998865 37777665333346777788877 6766667754
No 2
>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.62 E-value=40 Score=21.66 Aligned_cols=46 Identities=13% Similarity=0.200 Sum_probs=31.3
Q ss_pred HHHHCCCcEEEEeecCCCCCeEEEEEecc--ccCccEEEEEcCCEEEEE
Q 026604 146 ILKTQKNAKIGVVEDTPFGQYLQAEVDGG--FGRDVLEFLVKGDVVAYR 192 (236)
Q Consensus 146 vL~s~~~~kIv~~e~~~~g~YL~Ae~~Sg--F~dDvvEFl~~~~vV~vR 192 (236)
.|+. .|.+|...+++|--+...+....+ +.+++-+|++.++++++.
T Consensus 8 ~L~~-~~~~v~sV~~spi~GlyeV~~~~~i~Yvs~dG~y~i~G~l~~l~ 55 (60)
T d1eeja2 8 TLAK-MGIKSSDIQPAPVAGMKTVLTNSGVLYITDDGKHIIQGPMYDVS 55 (60)
T ss_dssp HHHH-TTCCEEEEEECSSTTEEEEEETTEEEEEETTSCEEEESCEEECS
T ss_pred HHHh-cCCceeEEecCCCCCeEEEEECCEEEEEcCCCCEEEEeEEEEcc
Confidence 3444 488999888888555666666553 556556888888777654
No 3
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.63 E-value=97 Score=20.74 Aligned_cols=45 Identities=4% Similarity=-0.124 Sum_probs=27.5
Q ss_pred CccCCcCCCCCHHHHHHHHHHHHHHHC-CCcEEEEeecCCCCCeEEEEE
Q 026604 124 FAFPLRIPENSTENAIQKLQEAILKTQ-KNAKIGVVEDTPFGQYLQAEV 171 (236)
Q Consensus 124 ~~~P~~~~~~s~~~A~~~L~~AvL~s~-~~~kIv~~e~~~~g~YL~Ae~ 171 (236)
-..||....-++++|-+.|++ ... .|+=++....+..|.|.-...
T Consensus 3 ~~~~Wyhg~isR~~Ae~lL~~---~g~~dG~FLVR~S~~~~g~y~LSv~ 48 (105)
T d1nrva_ 3 RTQHWFHGRISREESHRIIKQ---QGLVDGLFLLRDSQSNPKAFVLTLC 48 (105)
T ss_dssp TTSTTBCTTCCHHHHHHHHHH---TTCCTTEEEEEECSSCTTCEEEEEE
T ss_pred ccCcccCCCCCHHHHHHHHhh---cCCCCceEEEEeCCCCCCCEEEEEE
Confidence 357998877788888877643 122 355566654444456755543
No 4
>d1rjaa_ d.93.1.1 (A:) Tyrosine-protein kinase 6 (Breast tumor kinase, Brk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.26 E-value=44 Score=22.61 Aligned_cols=43 Identities=21% Similarity=0.196 Sum_probs=27.1
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHHHCCCcEEEEeecCCCCCeEEEE
Q 026604 126 FPLRIPENSTENAIQKLQEAILKTQKNAKIGVVEDTPFGQYLQAE 170 (236)
Q Consensus 126 ~P~~~~~~s~~~A~~~L~~AvL~s~~~~kIv~~e~~~~g~YL~Ae 170 (236)
+||.+..-++++|-+.|+. -...+|+=++....+..|.|.-..
T Consensus 2 epWy~g~isR~~Ae~~L~~--~~~~~G~FLvR~S~~~~g~y~LSv 44 (100)
T d1rjaa_ 2 EPWFFGCISRSEAVRRLQA--EGNATGAFLIRVSEKPSADYVLSV 44 (100)
T ss_dssp CCCBCTTCCHHHHHHHHSS--TTCSSCCEEEEECSSSSSCEEEEE
T ss_pred CCCcCCCCCHHHHHHHHhc--cCCCCCeEEeecCCCCCCCEEEEE
Confidence 6999877788888776532 012346667766555556676544
No 5
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.09 E-value=77 Score=21.15 Aligned_cols=48 Identities=15% Similarity=0.039 Sum_probs=30.8
Q ss_pred CccCCcCCCCCHHHHHHHHHHHHHHHCCCcEEEEeecCCCCCeEEEEEec
Q 026604 124 FAFPLRIPENSTENAIQKLQEAILKTQKNAKIGVVEDTPFGQYLQAEVDG 173 (236)
Q Consensus 124 ~~~P~~~~~~s~~~A~~~L~~AvL~s~~~~kIv~~e~~~~g~YL~Ae~~S 173 (236)
..+||.+..-++++|-+.|.. -....|+=++....+..|.|.-.....
T Consensus 4 ~~~~Wy~g~i~R~eAe~~L~~--~g~~~G~FLVR~S~~~~g~~~Lsv~~~ 51 (104)
T d1g83a2 4 QAEEWYFGKLGRKDAERQLLS--FGNPRGTFLIRESETTKGAYSLSIRDW 51 (104)
T ss_dssp GGSSSBCTTCCHHHHHHHHHS--TTCCTTCEEEEECSSSTTCEEEEEEEE
T ss_pred ccCCCcCCCCCHHHHHHHHHh--cCCCCCcEEEeccCCCCCCeEEEEEEe
Confidence 357999876788888776632 112357777776655567786665543
No 6
>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.30 E-value=74 Score=21.36 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=27.7
Q ss_pred cCCcCCCCCHHHHHHHHHHHHHHH-CCCcEEEEeecCCCCCeEEEEEe
Q 026604 126 FPLRIPENSTENAIQKLQEAILKT-QKNAKIGVVEDTPFGQYLQAEVD 172 (236)
Q Consensus 126 ~P~~~~~~s~~~A~~~L~~AvL~s-~~~~kIv~~e~~~~g~YL~Ae~~ 172 (236)
.||.+..-++++|-+.|.. .. ..|+=++...++..|.|.-....
T Consensus 4 ~pWy~g~isR~eAe~~L~~---~~~~~GtFLVR~S~~~~g~~~lsv~~ 48 (105)
T d1lkka_ 4 EPWFFKNLSRKDAERQLLA---PGNTHGSFLIRESESTAGSFSLSVRD 48 (105)
T ss_dssp CTTBCTTCCHHHHHHHHTS---TTCCTTCEEEEECSSSTTCEEEEEEE
T ss_pred CCccCCCCCHHHHHHHHHh---cCCCCCcEEEEccCCCCCCEEEEEEE
Confidence 5899877788888776521 22 33666666655555667665543
No 7
>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=17.97 E-value=1.1e+02 Score=20.58 Aligned_cols=38 Identities=16% Similarity=0.165 Sum_probs=24.6
Q ss_pred CcEEEEeecCCCCCe-EEEEEeccccCccEEEEEcCCEEEEEee
Q 026604 152 NAKIGVVEDTPFGQY-LQAEVDGGFGRDVLEFLVKGDVVAYRSV 194 (236)
Q Consensus 152 ~~kIv~~e~~~~g~Y-L~Ae~~SgF~dDvvEFl~~~~vV~vRSa 194 (236)
.+.|.+.++ +| |+++. -|+..|++++.++++.+.++..
T Consensus 12 pvdi~e~~~----~~~i~~~l-PG~~~edi~v~v~~~~l~I~~~ 50 (115)
T d1shsa_ 12 PISIIEGDQ----HIKVIAWL-PGVNKEDIILNAVGDTLEIRAK 50 (115)
T ss_dssp CEEEEECSS----EEEEEEEC-TTCCGGGEEEEEETTEEEEEEE
T ss_pred ceEEEEcCC----EEEEEEEC-CCCCHHHEEEEEECCEEEEEEE
Confidence 356666553 45 33333 3787788899998887777543
No 8
>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.87 E-value=86 Score=20.92 Aligned_cols=41 Identities=12% Similarity=-0.107 Sum_probs=27.0
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHHHCCCcEEEEeecCCCCCeEEE
Q 026604 125 AFPLRIPENSTENAIQKLQEAILKTQKNAKIGVVEDTPFGQYLQA 169 (236)
Q Consensus 125 ~~P~~~~~~s~~~A~~~L~~AvL~s~~~~kIv~~e~~~~g~YL~A 169 (236)
..+|....-++++|.+.|+ ...+|+=++.......|.|.-.
T Consensus 5 ~~~Wy~g~isR~~Ae~lL~----~~~~G~FLVR~S~~~~g~~~LS 45 (97)
T d1r1qa_ 5 FPEWFHEGLSRHQAENLLM----GKDIGFFIIRASQSSPGDFSIS 45 (97)
T ss_dssp CCTTBCTTCCHHHHHHHHH----TSCTTCEEEEECSSSTTCEEEE
T ss_pred cCCccCCCCCHHHHHHHHh----cCCCCCEEEeecCCCCCCEEEE
Confidence 4689887778888877663 2345666666655555666544
No 9
>d2r1jl1 a.35.1.2 (L:3-68) P22 C2 repressor, DNA-binding domain {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=16.50 E-value=34 Score=21.25 Aligned_cols=15 Identities=20% Similarity=0.171 Sum_probs=12.9
Q ss_pred HHHHHHHHHHhCCCC
Q 026604 215 EERMKQIIAELGWYA 229 (236)
Q Consensus 215 RkRvE~IR~~LgW~~ 229 (236)
.+||+++|++.||..
T Consensus 5 g~rik~~R~~~g~tq 19 (66)
T d2r1jl1 5 GERIRARRKKLKIRQ 19 (66)
T ss_dssp HHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHcCCCH
Confidence 479999999999974
No 10
>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.42 E-value=49 Score=22.44 Aligned_cols=45 Identities=11% Similarity=0.038 Sum_probs=28.8
Q ss_pred ccCCcCCCCCHHHHHHHHHHHHHHHCCCcEEEEeecCCCCCeEEEEE
Q 026604 125 AFPLRIPENSTENAIQKLQEAILKTQKNAKIGVVEDTPFGQYLQAEV 171 (236)
Q Consensus 125 ~~P~~~~~~s~~~A~~~L~~AvL~s~~~~kIv~~e~~~~g~YL~Ae~ 171 (236)
.+||....-++++|-+.|+. -...+|+=++.......|.|.-...
T Consensus 4 ~~~Wy~g~i~R~eAe~lL~~--~~~~~G~FLVR~S~~~~g~y~LSv~ 48 (106)
T d1o48a_ 4 AEEWYFGKITRRESERLLLN--AENPRGTFLVRESETTKGAYCLSVS 48 (106)
T ss_dssp GSTTEEESCCHHHHHHHHCC--TTCCTTCEEEEECSSSTTCEEEEEE
T ss_pred cCCccCCCCCHHHHHHHHHh--cCCCCCcEEEEcccCCCCCEEEEEE
Confidence 46998877788888766521 1123567777766556677766554
Done!