Query 026605
Match_columns 236
No_of_seqs 221 out of 2099
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 10:12:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026605.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026605hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 2.9E-44 6.3E-49 297.4 14.4 165 13-177 2-166 (303)
2 cd07420 MPP_RdgC Drosophila me 100.0 2.3E-40 5E-45 291.4 17.4 168 9-176 2-176 (321)
3 KOG0373 Serine/threonine speci 100.0 4.2E-39 9.1E-44 263.2 14.2 167 11-177 3-169 (306)
4 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1E-37 2.2E-42 271.7 16.5 164 14-177 2-165 (285)
5 KOG0371 Serine/threonine prote 100.0 2.1E-38 4.5E-43 264.2 11.5 177 1-177 7-183 (319)
6 PTZ00239 serine/threonine prot 100.0 1.8E-37 4E-42 271.7 17.7 165 13-177 2-166 (303)
7 cd07416 MPP_PP2B PP2B, metallo 100.0 3.4E-37 7.3E-42 270.9 18.1 164 13-177 2-165 (305)
8 PTZ00480 serine/threonine-prot 100.0 7.1E-37 1.5E-41 269.1 17.1 167 10-177 7-181 (320)
9 KOG0374 Serine/threonine speci 100.0 2.8E-37 6E-42 272.5 13.9 168 10-177 5-183 (331)
10 KOG0375 Serine-threonine phosp 100.0 2.8E-37 6E-42 267.6 12.1 185 11-198 45-229 (517)
11 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 1.9E-36 4E-41 264.7 15.4 163 14-177 2-172 (293)
12 cd07417 MPP_PP5_C PP5, C-termi 100.0 2.3E-36 4.9E-41 266.4 15.8 167 7-174 9-180 (316)
13 PTZ00244 serine/threonine-prot 100.0 5.5E-36 1.2E-40 261.6 16.6 162 14-176 4-173 (294)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 2.1E-35 4.5E-40 263.9 16.6 166 9-174 7-189 (377)
15 smart00156 PP2Ac Protein phosp 100.0 2.3E-35 4.9E-40 255.7 15.6 150 27-177 1-150 (271)
16 cd07419 MPP_Bsu1_C Arabidopsis 100.0 3E-34 6.5E-39 253.1 14.9 153 25-177 19-184 (311)
17 TIGR00668 apaH bis(5'-nucleosy 100.0 5.3E-32 1.1E-36 233.3 15.1 121 54-178 1-128 (279)
18 cd07423 MPP_PrpE Bacillus subt 100.0 4.6E-31 1E-35 224.5 15.3 179 54-235 1-233 (234)
19 PRK13625 bis(5'-nucleosyl)-tet 100.0 6.4E-31 1.4E-35 225.1 15.4 177 54-235 1-236 (245)
20 PRK00166 apaH diadenosine tetr 100.0 1.3E-30 2.8E-35 226.1 16.3 119 54-176 1-126 (275)
21 cd07413 MPP_PA3087 Pseudomonas 100.0 1.2E-28 2.6E-33 208.2 16.1 167 56-225 1-220 (222)
22 cd07422 MPP_ApaH Escherichia c 100.0 7.8E-29 1.7E-33 212.9 14.2 117 56-176 1-124 (257)
23 PRK11439 pphA serine/threonine 100.0 2.3E-28 4.9E-33 205.9 12.7 118 53-176 16-148 (218)
24 KOG0377 Protein serine/threoni 100.0 1.3E-28 2.8E-33 218.3 7.8 169 9-177 116-291 (631)
25 cd00144 MPP_PPP_family phospho 99.9 3.7E-25 8.1E-30 186.1 14.1 118 57-175 1-127 (225)
26 PRK09968 serine/threonine-spec 99.9 2E-25 4.4E-30 188.0 12.4 116 54-175 15-145 (218)
27 cd07424 MPP_PrpA_PrpB PrpA and 99.9 4.2E-25 9E-30 184.5 13.9 115 54-174 1-129 (207)
28 PHA02239 putative protein phos 99.9 1.6E-24 3.5E-29 184.2 14.6 121 54-175 1-167 (235)
29 cd07421 MPP_Rhilphs Rhilph pho 99.9 2.5E-24 5.3E-29 186.2 13.7 175 55-229 3-299 (304)
30 cd07425 MPP_Shelphs Shewanella 99.9 2.5E-24 5.4E-29 180.1 11.9 167 57-223 1-197 (208)
31 KOG0376 Serine-threonine phosp 99.8 3.6E-21 7.7E-26 173.8 3.9 190 11-202 167-361 (476)
32 PRK09453 phosphodiesterase; Pr 99.6 7E-15 1.5E-19 120.3 11.8 69 54-126 1-77 (182)
33 cd00841 MPP_YfcE Escherichia c 99.5 1.5E-13 3.3E-18 109.1 10.9 125 55-223 1-129 (155)
34 TIGR00040 yfcE phosphoesterase 99.5 3.6E-13 7.9E-18 107.6 9.2 130 54-223 1-133 (158)
35 PF00149 Metallophos: Calcineu 99.4 5E-13 1.1E-17 104.0 6.1 76 54-129 1-82 (200)
36 PF12850 Metallophos_2: Calcin 99.4 8E-13 1.7E-17 104.2 7.2 136 54-223 1-136 (156)
37 cd07379 MPP_239FB Homo sapiens 99.2 1.3E-11 2.8E-16 96.1 5.8 111 55-209 1-117 (135)
38 cd07397 MPP_DevT Myxococcus xa 99.2 9E-11 2E-15 99.7 10.7 151 55-214 2-214 (238)
39 cd07388 MPP_Tt1561 Thermus the 99.1 1E-10 2.2E-15 98.9 7.1 72 53-125 4-75 (224)
40 cd07394 MPP_Vps29 Homo sapiens 99.1 8.1E-10 1.8E-14 90.3 9.9 126 55-223 1-133 (178)
41 PRK11340 phosphodiesterase Yae 99.0 2.1E-09 4.5E-14 93.4 10.3 71 53-125 49-125 (271)
42 cd07385 MPP_YkuE_C Bacillus su 98.9 5.1E-09 1.1E-13 87.6 9.0 72 53-126 1-77 (223)
43 cd07403 MPP_TTHA0053 Thermus t 98.9 4.3E-09 9.3E-14 81.5 7.5 56 57-123 1-56 (129)
44 cd07404 MPP_MS158 Microscilla 98.9 4E-09 8.6E-14 84.7 6.5 67 56-125 1-68 (166)
45 cd00838 MPP_superfamily metall 98.9 1.5E-08 3.1E-13 76.2 8.8 67 57-123 1-69 (131)
46 cd07392 MPP_PAE1087 Pyrobaculu 98.8 9.9E-09 2.2E-13 83.2 5.7 66 56-127 1-67 (188)
47 cd07400 MPP_YydB Bacillus subt 98.7 7.3E-08 1.6E-12 75.3 9.5 68 56-124 1-80 (144)
48 COG0622 Predicted phosphoester 98.7 8E-08 1.7E-12 78.0 8.1 87 53-173 1-90 (172)
49 PRK05340 UDP-2,3-diacylglucosa 98.6 7.9E-08 1.7E-12 82.0 7.5 70 54-125 1-83 (241)
50 cd07402 MPP_GpdQ Enterobacter 98.6 1.1E-07 2.4E-12 80.4 8.1 67 55-125 1-83 (240)
51 cd07390 MPP_AQ1575 Aquifex aeo 98.6 2.2E-07 4.9E-12 75.0 9.3 66 56-126 1-83 (168)
52 cd00840 MPP_Mre11_N Mre11 nucl 98.6 4.5E-07 9.7E-12 75.5 10.6 74 55-128 1-92 (223)
53 cd07383 MPP_Dcr2 Saccharomyces 98.6 3.3E-07 7.2E-12 75.8 8.6 70 54-123 3-87 (199)
54 PRK04036 DNA polymerase II sma 98.5 6E-07 1.3E-11 84.6 9.6 114 53-174 243-388 (504)
55 TIGR03729 acc_ester putative p 98.4 4.2E-07 9E-12 77.4 6.2 68 55-125 1-74 (239)
56 cd07399 MPP_YvnB Bacillus subt 98.4 9.7E-07 2.1E-11 74.1 7.2 69 55-124 2-81 (214)
57 cd07396 MPP_Nbla03831 Homo sap 98.4 1.1E-06 2.4E-11 76.1 7.3 73 55-127 2-88 (267)
58 cd07391 MPP_PF1019 Pyrococcus 98.3 4.5E-06 9.8E-11 67.5 10.1 60 67-126 28-89 (172)
59 PHA02546 47 endonuclease subun 98.3 1.4E-06 2.9E-11 78.3 7.0 73 54-126 1-90 (340)
60 cd07401 MPP_TMEM62_N Homo sapi 98.3 3.7E-06 8.1E-11 72.4 9.0 71 56-126 2-90 (256)
61 TIGR00619 sbcd exonuclease Sbc 98.3 1.8E-06 3.8E-11 74.4 6.9 72 54-125 1-88 (253)
62 PRK11148 cyclic 3',5'-adenosin 98.2 4.8E-06 1E-10 72.4 7.6 72 52-125 13-98 (275)
63 PRK10966 exonuclease subunit S 98.1 7.1E-06 1.5E-10 75.4 7.4 71 54-125 1-87 (407)
64 TIGR01854 lipid_A_lpxH UDP-2,3 98.1 4.2E-06 9E-11 71.0 5.3 69 56-125 1-81 (231)
65 TIGR00583 mre11 DNA repair pro 98.1 1.1E-05 2.4E-10 74.0 8.0 74 53-126 3-124 (405)
66 TIGR00024 SbcD_rel_arch putati 98.0 1.1E-05 2.5E-10 68.3 6.8 69 54-126 15-103 (225)
67 cd08165 MPP_MPPE1 human MPPE1 97.9 1.5E-05 3.4E-10 63.6 5.3 50 77-126 35-90 (156)
68 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.9 2E-05 4.3E-10 68.3 6.1 70 56-125 1-86 (262)
69 COG1409 Icc Predicted phosphoh 97.9 4.3E-05 9.4E-10 65.8 8.0 74 54-129 1-82 (301)
70 cd08164 MPP_Ted1 Saccharomyces 97.9 0.00012 2.7E-09 60.4 9.7 67 60-126 23-112 (193)
71 cd07384 MPP_Cdc1_like Saccharo 97.8 0.0001 2.2E-09 59.8 8.6 52 75-126 40-101 (171)
72 cd07393 MPP_DR1119 Deinococcus 97.8 3.5E-05 7.6E-10 65.4 6.1 65 56-124 1-83 (232)
73 COG0420 SbcD DNA repair exonuc 97.8 4.4E-05 9.6E-10 69.6 7.2 73 54-126 1-89 (390)
74 cd07380 MPP_CWF19_N Schizosacc 97.8 7.3E-05 1.6E-09 59.4 6.6 66 57-123 1-68 (150)
75 COG2129 Predicted phosphoester 97.7 9E-05 1.9E-09 62.1 6.7 74 53-127 3-79 (226)
76 cd07398 MPP_YbbF-LpxH Escheric 97.7 5.6E-05 1.2E-09 62.8 5.5 69 57-126 1-83 (217)
77 cd07395 MPP_CSTP1 Homo sapiens 97.7 0.00014 3E-09 62.5 7.5 71 55-125 6-99 (262)
78 cd07386 MPP_DNA_pol_II_small_a 97.7 6.4E-05 1.4E-09 64.1 5.3 68 57-126 2-95 (243)
79 cd00839 MPP_PAPs purple acid p 97.6 5.8E-05 1.3E-09 65.8 4.3 69 54-126 5-82 (294)
80 cd08166 MPP_Cdc1_like_1 unchar 97.6 0.0005 1.1E-08 56.9 9.3 107 78-213 40-152 (195)
81 COG1408 Predicted phosphohydro 97.6 0.00016 3.4E-09 63.5 6.4 74 53-128 44-121 (284)
82 PF14582 Metallophos_3: Metall 97.5 7.5E-05 1.6E-09 62.8 3.2 72 54-126 6-103 (255)
83 cd00845 MPP_UshA_N_like Escher 97.5 0.00024 5.1E-09 60.6 5.7 66 55-125 2-82 (252)
84 COG4186 Predicted phosphoester 97.4 0.00065 1.4E-08 53.9 7.4 102 55-177 5-121 (186)
85 COG2908 Uncharacterized protei 97.1 0.0019 4.2E-08 54.7 7.6 99 57-174 1-115 (237)
86 cd07410 MPP_CpdB_N Escherichia 97.1 0.0008 1.7E-08 58.5 5.1 66 55-125 2-95 (277)
87 PLN02533 probable purple acid 96.9 0.0012 2.5E-08 61.2 4.7 70 53-125 139-211 (427)
88 COG1407 Predicted ICC-like pho 96.9 0.0037 8E-08 53.1 6.9 72 53-127 19-112 (235)
89 cd08163 MPP_Cdc1 Saccharomyces 96.7 0.011 2.5E-07 51.0 9.2 47 79-125 44-97 (257)
90 COG1768 Predicted phosphohydro 96.6 0.004 8.8E-08 50.7 5.1 45 79-127 42-88 (230)
91 cd07408 MPP_SA0022_N Staphyloc 96.5 0.0055 1.2E-07 52.7 5.9 66 55-125 2-82 (257)
92 cd07378 MPP_ACP5 Homo sapiens 96.4 0.0078 1.7E-07 51.9 6.3 69 55-125 2-83 (277)
93 cd07412 MPP_YhcR_N Bacillus su 96.4 0.0038 8.3E-08 54.7 4.3 65 55-124 2-87 (288)
94 cd07411 MPP_SoxB_N Thermus the 96.3 0.0072 1.6E-07 52.2 5.2 65 55-125 2-95 (264)
95 PF08321 PPP5: PPP5 TPR repeat 95.8 0.0099 2.2E-07 43.5 3.4 45 8-52 51-95 (95)
96 cd07406 MPP_CG11883_N Drosophi 95.5 0.028 6.2E-07 48.3 5.7 65 55-124 2-82 (257)
97 cd07409 MPP_CD73_N CD73 ecto-5 95.5 0.035 7.5E-07 48.4 6.2 66 55-125 2-94 (281)
98 PRK09419 bifunctional 2',3'-cy 95.4 0.02 4.4E-07 59.4 5.2 66 54-124 661-735 (1163)
99 KOG0376 Serine-threonine phosp 95.4 0.0049 1.1E-07 56.9 0.4 109 27-136 15-127 (476)
100 KOG1432 Predicted DNA repair e 95.2 0.056 1.2E-06 48.2 6.3 73 54-126 54-148 (379)
101 TIGR00282 metallophosphoestera 95.1 0.054 1.2E-06 47.1 6.0 67 54-125 1-71 (266)
102 cd00842 MPP_ASMase acid sphing 94.6 0.057 1.2E-06 47.1 5.1 72 55-127 39-124 (296)
103 COG1311 HYS2 Archaeal DNA poly 94.3 0.54 1.2E-05 43.9 10.6 114 55-174 227-366 (481)
104 KOG2863 RNA lariat debranching 94.1 0.073 1.6E-06 47.8 4.5 72 54-125 1-88 (456)
105 cd07405 MPP_UshA_N Escherichia 94.0 0.076 1.6E-06 46.5 4.4 66 55-125 2-87 (285)
106 cd08162 MPP_PhoA_N Synechococc 93.9 0.11 2.3E-06 46.3 5.2 65 55-124 2-90 (313)
107 KOG3325 Membrane coat complex 93.8 0.41 8.9E-06 37.9 7.7 115 55-212 2-123 (183)
108 KOG3662 Cell division control 93.7 0.17 3.7E-06 46.4 6.3 73 53-125 48-144 (410)
109 cd07407 MPP_YHR202W_N Saccharo 93.5 0.1 2.2E-06 45.7 4.4 67 54-125 6-97 (282)
110 TIGR01390 CycNucDiestase 2',3' 93.5 0.11 2.4E-06 50.6 4.9 66 54-124 3-98 (626)
111 COG0737 UshA 5'-nucleotidase/2 93.5 0.11 2.5E-06 49.1 5.0 68 53-125 26-115 (517)
112 PRK09420 cpdB bifunctional 2', 93.4 0.12 2.5E-06 50.6 4.9 69 51-124 23-121 (649)
113 cd07382 MPP_DR1281 Deinococcus 93.2 0.21 4.5E-06 43.2 5.6 66 55-125 1-70 (255)
114 PF06874 FBPase_2: Firmicute f 93.2 0.061 1.3E-06 51.5 2.5 47 79-130 183-229 (640)
115 PRK09419 bifunctional 2',3'-cy 92.9 0.15 3.1E-06 53.2 5.0 67 53-124 41-138 (1163)
116 PRK11907 bifunctional 2',3'-cy 92.1 0.23 5E-06 49.6 5.1 67 53-124 115-212 (814)
117 KOG2476 Uncharacterized conser 92.1 0.45 9.8E-06 44.1 6.5 69 53-122 5-75 (528)
118 TIGR01530 nadN NAD pyrophospha 91.0 0.46 9.9E-06 45.5 5.7 66 55-125 2-94 (550)
119 PF04042 DNA_pol_E_B: DNA poly 90.3 0.38 8.2E-06 39.7 4.0 72 56-127 1-93 (209)
120 KOG2310 DNA repair exonuclease 90.3 0.95 2.1E-05 42.9 6.8 58 52-109 12-85 (646)
121 PTZ00422 glideosome-associated 90.0 0.67 1.5E-05 42.5 5.6 72 53-124 26-108 (394)
122 PRK09418 bifunctional 2',3'-cy 88.9 0.56 1.2E-05 46.8 4.5 68 52-124 38-141 (780)
123 COG3855 Fbp Uncharacterized pr 88.2 0.78 1.7E-05 42.7 4.6 47 81-132 191-237 (648)
124 cd07387 MPP_PolD2_C PolD2 (DNA 88.1 1.6 3.5E-05 37.8 6.4 72 56-129 2-111 (257)
125 KOG1378 Purple acid phosphatas 87.0 0.86 1.9E-05 42.3 4.2 74 52-128 146-224 (452)
126 KOG2679 Purple (tartrate-resis 85.4 1.4 2.9E-05 38.5 4.3 71 54-125 44-126 (336)
127 PRK09558 ushA bifunctional UDP 83.8 1.3 2.7E-05 42.5 3.9 68 53-125 34-121 (551)
128 PTZ00235 DNA polymerase epsilo 83.0 5.7 0.00012 35.0 7.3 74 53-126 27-123 (291)
129 KOG3947 Phosphoesterases [Gene 81.1 1.7 3.6E-05 37.9 3.2 66 53-126 61-127 (305)
130 COG0639 ApaH Diadenosine tetra 80.7 0.45 9.9E-06 35.8 -0.3 50 128-177 4-57 (155)
131 KOG3339 Predicted glycosyltran 72.2 33 0.00072 28.4 8.2 86 82-173 40-141 (211)
132 PF06874 FBPase_2: Firmicute f 69.0 5 0.00011 38.8 3.3 39 38-76 17-55 (640)
133 PF02875 Mur_ligase_C: Mur lig 68.1 14 0.0003 26.0 4.9 66 55-120 13-80 (91)
134 KOG3425 Uncharacterized conser 63.6 33 0.00072 26.2 6.2 60 66-125 12-79 (128)
135 PF04723 GRDA: Glycine reducta 53.4 61 0.0013 25.4 6.2 70 53-126 5-80 (150)
136 PRK10773 murF UDP-N-acetylmura 51.7 46 0.00099 30.9 6.5 66 54-120 325-392 (453)
137 COG0770 MurF UDP-N-acetylmuram 50.2 62 0.0014 30.4 7.1 69 53-121 325-395 (451)
138 COG3855 Fbp Uncharacterized pr 48.6 9.1 0.0002 35.9 1.2 39 38-76 22-60 (648)
139 PF13258 DUF4049: Domain of un 47.9 29 0.00063 29.8 4.0 45 81-125 85-140 (318)
140 cd07382 MPP_DR1281 Deinococcus 47.0 17 0.00037 31.3 2.7 41 83-126 1-41 (255)
141 TIGR00282 metallophosphoestera 46.0 16 0.00034 31.8 2.2 41 83-126 2-42 (266)
142 COG1692 Calcineurin-like phosp 44.9 78 0.0017 27.4 6.2 66 54-124 1-70 (266)
143 COG4320 Uncharacterized protei 44.8 15 0.00033 32.9 2.0 27 45-71 48-75 (410)
144 COG3207 DIT1 Pyoverdine/dityro 43.8 40 0.00087 29.5 4.3 43 48-90 100-156 (330)
145 PF06490 FleQ: Flagellar regul 42.2 96 0.0021 22.8 5.8 64 55-125 1-81 (109)
146 PTZ00126 tyrosyl-tRNA syntheta 39.0 89 0.0019 28.7 6.1 112 2-122 25-151 (383)
147 PRK13265 glycine/sarcosine/bet 37.5 1.5E+02 0.0033 23.2 6.2 70 53-126 6-81 (154)
148 TIGR01143 murF UDP-N-acetylmur 37.4 1.1E+02 0.0024 27.9 6.6 69 54-122 296-365 (417)
149 COG1060 ThiH Thiamine biosynth 37.4 66 0.0014 29.4 5.0 111 14-128 8-123 (370)
150 PRK05564 DNA polymerase III su 33.1 1.6E+02 0.0034 25.8 6.7 58 24-87 70-128 (313)
151 PF14164 YqzH: YqzH-like prote 30.6 1.1E+02 0.0023 20.7 3.8 37 12-48 4-47 (64)
152 COG1692 Calcineurin-like phosp 30.0 76 0.0016 27.4 3.8 40 83-125 2-41 (266)
153 TIGR01307 pgm_bpd_ind 2,3-bisp 28.4 4.5E+02 0.0098 25.1 9.1 76 23-107 85-164 (501)
154 PF12641 Flavodoxin_3: Flavodo 28.2 3E+02 0.0065 21.8 6.9 52 57-108 2-66 (160)
155 TIGR01143 murF UDP-N-acetylmur 28.0 3.3E+02 0.0072 24.8 8.1 67 54-125 325-409 (417)
156 PF04263 TPK_catalytic: Thiami 26.9 48 0.001 25.2 2.0 54 55-108 37-112 (123)
157 PF13277 YmdB: YmdB-like prote 26.2 2.1E+02 0.0046 24.7 5.9 63 57-124 1-67 (253)
158 KOG3770 Acid sphingomyelinase 24.8 1.5E+02 0.0032 28.8 5.2 64 67-130 195-268 (577)
159 PRK05434 phosphoglyceromutase; 24.6 4.6E+02 0.01 25.1 8.5 91 23-122 89-187 (507)
160 PF12982 DUF3866: Protein of u 24.2 2.4E+02 0.0053 25.2 6.1 56 51-110 86-141 (320)
161 PRK11929 putative bifunctional 24.1 2.4E+02 0.0052 29.0 6.9 70 54-123 834-905 (958)
162 PRK14093 UDP-N-acetylmuramoyla 23.3 2.8E+02 0.0062 25.9 6.8 66 54-120 337-408 (479)
163 PRK14838 undecaprenyl pyrophos 23.0 1.1E+02 0.0024 26.2 3.6 49 28-77 71-119 (242)
164 PF02885 Glycos_trans_3N: Glyc 22.9 1.3E+02 0.0029 19.8 3.4 26 14-39 2-27 (66)
165 TIGR01428 HAD_type_II 2-haloal 22.1 4E+02 0.0087 21.0 9.7 68 53-123 108-175 (198)
166 PF13788 DUF4180: Domain of un 21.7 1.6E+02 0.0034 22.2 3.8 35 53-89 69-105 (113)
167 COG3433 Aryl carrier domain [S 20.9 47 0.001 23.0 0.8 22 89-110 23-44 (74)
168 PRK05707 DNA polymerase III su 20.8 3.4E+02 0.0073 24.2 6.5 55 26-86 85-140 (328)
169 KOG1602 Cis-prenyltransferase 20.7 1.6E+02 0.0035 25.6 4.1 50 28-77 97-150 (271)
170 TIGR01201 HU_rel DNA-binding p 20.3 1.9E+02 0.0042 22.5 4.3 35 11-45 30-64 (145)
171 PTZ00349 dehydrodolichyl dipho 20.1 1.2E+02 0.0026 27.2 3.4 50 28-77 80-133 (322)
172 PF03786 UxuA: D-mannonate deh 20.1 6.7E+02 0.014 22.8 8.1 103 5-109 153-264 (351)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-44 Score=297.41 Aligned_cols=165 Identities=66% Similarity=1.157 Sum_probs=161.7
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccC
Q 026605 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (236)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vd 92 (236)
++|+.|+++.++..+++.++..||.++.+++.+|+|++.+..|+.|+|||||++.+|..+|+..+..+..+++|||||||
T Consensus 2 dldr~ie~L~~~~li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLFLGDyVD 81 (303)
T KOG0372|consen 2 DLDRQIEQLRRCELIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLFLGDYVD 81 (303)
T ss_pred cHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEeecchhc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeC
Q 026605 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVG 172 (236)
Q Consensus 93 rG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg 172 (236)
||.+|+|++.+|..+|.+||+++.+||||||.+.++..|||++||.+|||+..+|....+.|+.||+++++++++||+||
T Consensus 82 RG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~kifCVHG 161 (303)
T KOG0372|consen 82 RGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGKIFCVHG 161 (303)
T ss_pred cccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCcEEEEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccc
Q 026605 173 CPLQL 177 (236)
Q Consensus 173 ~~~~~ 177 (236)
+.+|.
T Consensus 162 GlSP~ 166 (303)
T KOG0372|consen 162 GLSPS 166 (303)
T ss_pred CCCcc
Confidence 98765
No 2
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.3e-40 Score=291.44 Aligned_cols=168 Identities=31% Similarity=0.565 Sum_probs=158.1
Q ss_pred CCccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCC----ceeEecCCCccHHHHHHHHHhcCCCC-Cce
Q 026605 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKS----PVTICGDIHGQFHDLAELFQIGGKCP-DTN 83 (236)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~----~i~vigDIHG~~~~L~~ll~~~~~~~-~~~ 83 (236)
.++..++++|+++.+...++++++.+||++|+++|++||+++++.. |++||||||||+.+|.++|+..+.++ .++
T Consensus 2 ~~~~~~~~~i~~~~~~~~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~~~~~~~ 81 (321)
T cd07420 2 LTKDHIDALIEAFKEKQLLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGLPSPENP 81 (321)
T ss_pred CCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCCCCccce
Confidence 4677899999999999999999999999999999999999998865 89999999999999999999998774 568
Q ss_pred EEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCC--chhHHHHHHHhccCcceE
Q 026605 84 YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTA 161 (236)
Q Consensus 84 ~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~l~~~~~~~~~~LP~~~ 161 (236)
++|||||||||++|+||+.+|.++|..+|++++++|||||.+.++..+||.+|+..+|+. ..+|..+.++|++||+++
T Consensus 82 ~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~~LPlaa 161 (321)
T cd07420 82 YVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFSWLPLAT 161 (321)
T ss_pred EEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHHhCCceE
Confidence 999999999999999999999999999999999999999999999999999999999974 679999999999999999
Q ss_pred EECcEEEEEeCCCcc
Q 026605 162 LSQKYSVCMVGCPLQ 176 (236)
Q Consensus 162 ~~~~~~~~~hg~~~~ 176 (236)
++++++||+||+.++
T Consensus 162 ii~~~i~cvHGGi~~ 176 (321)
T cd07420 162 IIDNKILVVHGGISD 176 (321)
T ss_pred EEcCCEEEEeCCCCC
Confidence 999999999998764
No 3
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-39 Score=263.23 Aligned_cols=167 Identities=62% Similarity=1.089 Sum_probs=162.5
Q ss_pred ccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccc
Q 026605 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDY 90 (236)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~ 90 (236)
+.++|.-|+...+++-+++.+++.||+.++++++.|.+++++..|+.|+|||||++.+|..+++..+.-+...++|+||+
T Consensus 3 ~~d~d~wi~~vk~ckyLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~tnYiFmGDf 82 (306)
T KOG0373|consen 3 KMDLDQWIETVKKCKYLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDTNYIFMGDF 82 (306)
T ss_pred cCCHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCcceEEeccc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999899999999999
Q ss_pred cCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEE
Q 026605 91 VDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCM 170 (236)
Q Consensus 91 vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~ 170 (236)
||||.+|+|++.+++.+|.+||.++.++|||||.+.+...|||++||..|||+...|+...+.|..|++++++++.++|+
T Consensus 83 VDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAiID~~vLCV 162 (306)
T KOG0373|consen 83 VDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAIIDEKVLCV 162 (306)
T ss_pred cccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHHhcCcEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccc
Q 026605 171 VGCPLQL 177 (236)
Q Consensus 171 hg~~~~~ 177 (236)
||+.++.
T Consensus 163 HGGLSPd 169 (306)
T KOG0373|consen 163 HGGLSPD 169 (306)
T ss_pred cCCCCcc
Confidence 9997764
No 4
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1e-37 Score=271.73 Aligned_cols=164 Identities=72% Similarity=1.192 Sum_probs=157.5
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCC
Q 026605 14 LDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDR 93 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdr 93 (236)
++++++++.++..++++++.+||++|++++++||+++++..+++|+||||||+.+|.++|+..++++.++++||||||||
T Consensus 2 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDR 81 (285)
T cd07415 2 LDKWIEQLKKCELLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDR 81 (285)
T ss_pred HHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred CCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeCC
Q 026605 94 GYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGC 173 (236)
Q Consensus 94 G~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg~ 173 (236)
|++|.|++.+++++|..+|++++++|||||.+.++..++|..|+..+|+...+|..+.++|.+||++++++++++|+||+
T Consensus 82 G~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~i~cvHgG 161 (285)
T cd07415 82 GYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQIFCVHGG 161 (285)
T ss_pred CcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCeEEEEcCC
Confidence 99999999999999999999999999999999999999999999999987789999999999999999999999999998
Q ss_pred Cccc
Q 026605 174 PLQL 177 (236)
Q Consensus 174 ~~~~ 177 (236)
.++.
T Consensus 162 i~p~ 165 (285)
T cd07415 162 LSPS 165 (285)
T ss_pred CCCC
Confidence 7643
No 5
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=264.23 Aligned_cols=177 Identities=72% Similarity=1.168 Sum_probs=172.0
Q ss_pred CCCCCCCCCCccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCC
Q 026605 1 MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCP 80 (236)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~ 80 (236)
|.++.+++.....++.-|+.+.+++++++.++..+|+.|++++++|.++.+++.++.|+||+||||++|.++++..+..+
T Consensus 7 ~ra~~~~~~~i~~vd~~ie~L~~ck~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~p 86 (319)
T KOG0371|consen 7 MRARILATALILDVDPWIEQLYKCKPLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAP 86 (319)
T ss_pred ccccccccccccccccchHHHHhcCCCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCC
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999888889
Q ss_pred CceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcce
Q 026605 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLT 160 (236)
Q Consensus 81 ~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~ 160 (236)
...++|+|||||||++|.|++.++.++|.+||++|.++|||||.+.+...++|++||.+|||+...|..|.+.|+++|++
T Consensus 87 dtnylfmGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~t 166 (319)
T KOG0371|consen 87 DTNYLFMGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLT 166 (319)
T ss_pred CcceeeeeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECcEEEEEeCCCccc
Q 026605 161 ALSQKYSVCMVGCPLQL 177 (236)
Q Consensus 161 ~~~~~~~~~~hg~~~~~ 177 (236)
+.+++++||.||+..+.
T Consensus 167 ali~~~ifc~HGgLsps 183 (319)
T KOG0371|consen 167 ALIESKIFCLHGGLSPS 183 (319)
T ss_pred hhhccceeeccCCcCcc
Confidence 99999999999987664
No 6
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=1.8e-37 Score=271.71 Aligned_cols=165 Identities=58% Similarity=1.033 Sum_probs=157.8
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccC
Q 026605 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (236)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vd 92 (236)
+++++|+.+.++..++++++.+||++|+++|++||+++++..+++|+||||||+.+|.++++..+..+.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVD 81 (303)
T PTZ00239 2 DIDRHIATLLNGGCLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIFIGDFVD 81 (303)
T ss_pred CHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEeeeEcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeC
Q 026605 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVG 172 (236)
Q Consensus 93 rG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg 172 (236)
||++|.|++.+++++|..+|.+++++|||||.+.++..++|..|+..+|+...+|..+.++|++||++++++++++|+||
T Consensus 82 RG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~i~cvHg 161 (303)
T PTZ00239 82 RGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQILCVHG 161 (303)
T ss_pred CCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCeEEEEcC
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred CCccc
Q 026605 173 CPLQL 177 (236)
Q Consensus 173 ~~~~~ 177 (236)
+..+.
T Consensus 162 Gi~p~ 166 (303)
T PTZ00239 162 GLSPD 166 (303)
T ss_pred ccCcc
Confidence 87543
No 7
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.4e-37 Score=270.89 Aligned_cols=164 Identities=42% Similarity=0.769 Sum_probs=156.0
Q ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccC
Q 026605 13 DLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVD 92 (236)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vd 92 (236)
.++.+++++.++..++++++.+||++|+++|++||+++++..|++||||||||+.+|.++|+..+.++.++++|||||||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylFLGDyVD 81 (305)
T cd07416 2 RIDVLKAHFMREGRLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLFLGDYVD 81 (305)
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEEECCccC
Confidence 47889999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred CCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeC
Q 026605 93 RGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVG 172 (236)
Q Consensus 93 rG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg 172 (236)
||++|+|++.+++++|..+|++++++|||||.+.++..++|..++..+|+ ..+|+.+.++|++||++++++++++|+||
T Consensus 82 RG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~-~~l~~~~~~~f~~LPlaaii~~~i~~vHG 160 (305)
T cd07416 82 RGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS-ERVYDACMEAFDCLPLAALMNQQFLCVHG 160 (305)
T ss_pred CCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc-HHHHHHHHHHHhhccceeEEcCCEEEEcC
Confidence 99999999999999999999999999999999999989999999999994 68999999999999999999889999999
Q ss_pred CCccc
Q 026605 173 CPLQL 177 (236)
Q Consensus 173 ~~~~~ 177 (236)
+.++.
T Consensus 161 Gi~p~ 165 (305)
T cd07416 161 GLSPE 165 (305)
T ss_pred CCCcc
Confidence 87654
No 8
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=7.1e-37 Score=269.06 Aligned_cols=167 Identities=45% Similarity=0.909 Sum_probs=157.1
Q ss_pred CccCHHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCC
Q 026605 10 TTTDLDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPD 81 (236)
Q Consensus 10 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~ 81 (236)
....++++|+++.+.. .++++++.+||++|+++|++||+++++..+++|+||||||+.+|.++|+..++++.
T Consensus 7 ~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~ 86 (320)
T PTZ00480 7 GEIDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPE 86 (320)
T ss_pred cCcCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCc
Confidence 3445899999998765 58999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceE
Q 026605 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTA 161 (236)
Q Consensus 82 ~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~ 161 (236)
+++||||||||||++|+|++.+++++|..+|.+++++|||||...++..++|..|+..+|+ ..+|..+.++|.+||+++
T Consensus 87 ~~ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~-~~l~~~~~~~F~~LPlaA 165 (320)
T PTZ00480 87 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT-IKLWKTFTDCFNCLPVAA 165 (320)
T ss_pred ceEEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC-HHHHHHHHHHHHhccHhh
Confidence 9999999999999999999999999999999999999999999999999999999999995 689999999999999999
Q ss_pred EECcEEEEEeCCCccc
Q 026605 162 LSQKYSVCMVGCPLQL 177 (236)
Q Consensus 162 ~~~~~~~~~hg~~~~~ 177 (236)
++++++||+||+.++.
T Consensus 166 iI~~~i~cvHGGI~p~ 181 (320)
T PTZ00480 166 LIDEKILCMHGGLSPE 181 (320)
T ss_pred eecCcEEEEcCCcCcc
Confidence 9999999999997543
No 9
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=2.8e-37 Score=272.53 Aligned_cols=168 Identities=48% Similarity=0.915 Sum_probs=155.7
Q ss_pred CccCHHHHHHHHhcCC----------CCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcC-C
Q 026605 10 TTTDLDEQISQLMQCK----------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG-K 78 (236)
Q Consensus 10 ~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~-~ 78 (236)
....+++.+.++.+.. ++++.++..+|..+.++|.++|+++++..||.|+|||||++.+|.+++...+ +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 3455666677664332 4889999999999999999999999999999999999999999999999999 9
Q ss_pred CCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCc
Q 026605 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFP 158 (236)
Q Consensus 79 ~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP 158 (236)
++..+++|||||||||++|+|++.+|.++|++||++++++|||||.+.++..|||++||.++|+...+|..|++.|+.||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999976789999999999999
Q ss_pred ceEEECcEEEEEeCCCccc
Q 026605 159 LTALSQKYSVCMVGCPLQL 177 (236)
Q Consensus 159 ~~~~~~~~~~~~hg~~~~~ 177 (236)
++++++++++|+||+..+.
T Consensus 165 ~~a~i~~kI~CmhGGlsp~ 183 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPH 183 (331)
T ss_pred hhheecceEEEecCCCChh
Confidence 9999999999999997654
No 10
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.8e-37 Score=267.59 Aligned_cols=185 Identities=36% Similarity=0.666 Sum_probs=168.2
Q ss_pred ccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccc
Q 026605 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDY 90 (236)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~ 90 (236)
+-..+-+.+++.+.++++++....|+.+++.+|++|++++++++||.|+|||||+|.+|.++++..|.+...+++|||||
T Consensus 45 kP~~~~Lr~Hf~~EGrl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDY 124 (517)
T KOG0375|consen 45 KPRHDVLRNHFIKEGRLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDY 124 (517)
T ss_pred CcchHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccc
Confidence 33467888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEE
Q 026605 91 VDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCM 170 (236)
Q Consensus 91 vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~ 170 (236)
||||..|+||+.+|..+|+.||+..+++|||||++.+...+.|..||..|| +.++|+...+-|+.||+++..+..++|+
T Consensus 125 VDRGyFSiECvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKY-se~vYdaCmesFd~LPLAAlmNqQflCV 203 (517)
T KOG0375|consen 125 VDRGYFSIECVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SERVYDACMESFDCLPLAALMNQQFLCV 203 (517)
T ss_pred cccceeeeehHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhc-cHHHHHHHHHHhccchHHHHhcCceEEe
Confidence 999999999999999999999999999999999999999999999999999 5799999999999999999999999999
Q ss_pred eCCCccccccccccceeeeecccccCCc
Q 026605 171 VGCPLQLKLLIISGTLIVFKRFLMKGPC 198 (236)
Q Consensus 171 hg~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (236)
||+.++.- ...+++...++|..++.-
T Consensus 204 HGGlSPEi--~tl~DIr~l~RF~EpPa~ 229 (517)
T KOG0375|consen 204 HGGLSPEI--HTLDDIRKLDRFKEPPAF 229 (517)
T ss_pred cCCCCccc--ccHHHHHhhhhccCCCcc
Confidence 99977642 233455555666555443
No 11
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=1.9e-36 Score=264.71 Aligned_cols=163 Identities=45% Similarity=0.919 Sum_probs=153.3
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEE
Q 026605 14 LDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYL 85 (236)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v 85 (236)
++++|+++.+.. .++++++.+||++++++|++||+++++..+++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 677888887655 689999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECc
Q 026605 86 FMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQK 165 (236)
Q Consensus 86 ~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~ 165 (236)
|||||||||++|+|++.+++++|..+|.+++++|||||.+.++..++|.+++..+|+ ..+|..+.++|.+||+++++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaa~i~~ 160 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN-IKLWKTFTDCFNCLPVAAIIDE 160 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh-HHHHHHHHHHHHHhHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999995 6799999999999999999999
Q ss_pred EEEEEeCCCccc
Q 026605 166 YSVCMVGCPLQL 177 (236)
Q Consensus 166 ~~~~~hg~~~~~ 177 (236)
+++|+||+..+.
T Consensus 161 ~i~cvHgGi~p~ 172 (293)
T cd07414 161 KIFCMHGGLSPD 172 (293)
T ss_pred cEEEEccCCCcc
Confidence 999999986553
No 12
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=2.3e-36 Score=266.40 Aligned_cols=167 Identities=33% Similarity=0.617 Sum_probs=154.7
Q ss_pred CCCCccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccCCc----eeEecCCCccHHHHHHHHHhcCCCC-C
Q 026605 7 STDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSP----VTICGDIHGQFHDLAELFQIGGKCP-D 81 (236)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~----i~vigDIHG~~~~L~~ll~~~~~~~-~ 81 (236)
+..+...++++++++.++..++++++.+||++|+++|++||+++++..+ ++||||||||+.+|.++|+..++++ .
T Consensus 9 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~~~~~ 88 (316)
T cd07417 9 EKVTLEFVKEMIEWFKDQKKLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGLPSET 88 (316)
T ss_pred CCCCHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCCCCcc
Confidence 3456778999999999999999999999999999999999999988644 9999999999999999999998764 4
Q ss_pred ceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceE
Q 026605 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTA 161 (236)
Q Consensus 82 ~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~ 161 (236)
++++|||||||||++|+|++.+++++|..+|++++++|||||.+.++..++|..++..+|+ ..+|+.+.++|.+||+++
T Consensus 89 ~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~-~~l~~~~~~~f~~LPlaa 167 (316)
T cd07417 89 NPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYN-EQMFDLFSEVFNWLPLAH 167 (316)
T ss_pred CeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhccc-HHHHHHHHHHHHhchHhh
Confidence 5799999999999999999999999999999999999999999999999999999999995 579999999999999999
Q ss_pred EECcEEEEEeCCC
Q 026605 162 LSQKYSVCMVGCP 174 (236)
Q Consensus 162 ~~~~~~~~~hg~~ 174 (236)
+++++++|+||+.
T Consensus 168 ii~~~~~~vHgGi 180 (316)
T cd07417 168 LINGKVLVVHGGL 180 (316)
T ss_pred eeCCeEEEEcccc
Confidence 9998899999875
No 13
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=5.5e-36 Score=261.55 Aligned_cols=162 Identities=38% Similarity=0.766 Sum_probs=151.9
Q ss_pred HHHHHHHHhcCC--------CCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEE
Q 026605 14 LDEQISQLMQCK--------PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYL 85 (236)
Q Consensus 14 ~~~~~~~~~~~~--------~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v 85 (236)
+|++|+++.+.. .++.+++.+||++++++|++||+++++..+++|+||||||+.+|.++|+.++.++.++++
T Consensus 4 ~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~~l 83 (294)
T PTZ00244 4 VQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSNYL 83 (294)
T ss_pred HHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCcccEE
Confidence 577788887654 588999999999999999999999999999999999999999999999999999888999
Q ss_pred EeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECc
Q 026605 86 FMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQK 165 (236)
Q Consensus 86 ~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~ 165 (236)
|||||||||++|.|++.+++.+|..+|.+++++|||||.+.++..++|.+++..+|+ ..+|+.+.+||++||+++++++
T Consensus 84 fLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~-~~l~~~~~~~f~~lPlaaii~~ 162 (294)
T PTZ00244 84 FLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN-IKLFKAFTDVFNTMPVCCVISE 162 (294)
T ss_pred EeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh-HHHHHHHHHHHHhCchheEecC
Confidence 999999999999999999999999999999999999999999999999999999995 6799999999999999999999
Q ss_pred EEEEEeCCCcc
Q 026605 166 YSVCMVGCPLQ 176 (236)
Q Consensus 166 ~~~~~hg~~~~ 176 (236)
.++|+||+.++
T Consensus 163 ~il~vHgGi~p 173 (294)
T PTZ00244 163 KIICMHGGLSP 173 (294)
T ss_pred eeEEEcCCCCc
Confidence 99999998654
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=2.1e-35 Score=263.93 Aligned_cols=166 Identities=34% Similarity=0.528 Sum_probs=153.1
Q ss_pred CCccCHHHHHHHHhcC----------CCCCHHHHHHHHHHHHHHHhhcCCccccC----CceeEecCCCccHHHHHHHHH
Q 026605 9 DTTTDLDEQISQLMQC----------KPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQ 74 (236)
Q Consensus 9 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~~~~~~e~~~~~~~----~~i~vigDIHG~~~~L~~ll~ 74 (236)
.+.++++.||+.+... ..++.+++.+||++|+++|++||+++++. .+++||||||||+.+|.++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~ 86 (377)
T cd07418 7 LTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLE 86 (377)
T ss_pred cCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHH
Confidence 4778899999999655 34789999999999999999999999987 799999999999999999999
Q ss_pred hcCCCCC-ceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCC--chhHHHHH
Q 026605 75 IGGKCPD-TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFT 151 (236)
Q Consensus 75 ~~~~~~~-~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~l~~~~~ 151 (236)
..+.++. +.+||||||||||++|+|++.+++++|..+|++++++|||||...++..++|..++..+|+. ..+|+.+.
T Consensus 87 ~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~ 166 (377)
T cd07418 87 DAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCL 166 (377)
T ss_pred HhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHH
Confidence 9988764 46999999999999999999999999999999999999999999999999999999999975 47999999
Q ss_pred HHhccCcceEEECcEEEEEeCCC
Q 026605 152 DLFDYFPLTALSQKYSVCMVGCP 174 (236)
Q Consensus 152 ~~~~~LP~~~~~~~~~~~~hg~~ 174 (236)
+||++||+++++++++||+||+.
T Consensus 167 ~~f~~LPlaavI~~~i~cvHGGI 189 (377)
T cd07418 167 GCFEGLPLASIIAGRVYTAHGGL 189 (377)
T ss_pred HHHHhCCcEEEECCCEEEECCCc
Confidence 99999999999988899988886
No 15
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=2.3e-35 Score=255.69 Aligned_cols=150 Identities=51% Similarity=0.953 Sum_probs=142.8
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHH
Q 026605 27 LSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVA 106 (236)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~ 106 (236)
++++++.+||++|+++|++||+++++.+|++||||||||+.+|.++|+..+.++.+++||||||||||++|.|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeCCCccc
Q 026605 107 LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQL 177 (236)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg~~~~~ 177 (236)
+|..+|++++++|||||.+.++..++|.+++..+|+ ..+|+.+.++|++||++++++++++|+||+.++.
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~-~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~ 150 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG-EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPD 150 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC-HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCc
Confidence 999999999999999999999999999999999996 6899999999999999999999899999987643
No 16
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=3e-34 Score=253.07 Aligned_cols=153 Identities=41% Similarity=0.799 Sum_probs=140.6
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcCCCCC--------ceEEEeccccCCCCC
Q 026605 25 KPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPD--------TNYLFMGDYVDRGYY 96 (236)
Q Consensus 25 ~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~--------~~~v~LGD~vdrG~~ 96 (236)
..++++++.+||++|.++|++||+++++..+++||||||||+++|.++|+.++.++. .++||||||||||++
T Consensus 19 ~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfLGDyVDRGp~ 98 (311)
T cd07419 19 FFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFLGDYVDRGSN 98 (311)
T ss_pred cCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEECCccCCCCC
Confidence 357899999999999999999999999999999999999999999999999886643 479999999999999
Q ss_pred CHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCC-----chhHHHHHHHhccCcceEEECcEEEEEe
Q 026605 97 SVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN-----ANIWKIFTDLFDYFPLTALSQKYSVCMV 171 (236)
Q Consensus 97 s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~-----~~l~~~~~~~~~~LP~~~~~~~~~~~~h 171 (236)
|+||+.++++++..+|++++++|||||.+.++..++|..++..+|+. ..+|+.+.++|++||++++++++++|+|
T Consensus 99 s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~avi~~~~l~vH 178 (311)
T cd07419 99 SLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAIIEDKILCMH 178 (311)
T ss_pred hHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhheecccEEEEc
Confidence 99999999999999999999999999999999999999999999875 3689999999999999998888888888
Q ss_pred CCCccc
Q 026605 172 GCPLQL 177 (236)
Q Consensus 172 g~~~~~ 177 (236)
|+.++.
T Consensus 179 gGi~p~ 184 (311)
T cd07419 179 GGIGRS 184 (311)
T ss_pred cCCCCC
Confidence 886543
No 17
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.98 E-value=5.3e-32 Score=233.32 Aligned_cols=121 Identities=21% Similarity=0.278 Sum_probs=97.6
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
|+++||||||||+++|+++|+++++. +.|+++|+||+|||||+|.+|+++++++. .++++|+||||.++++...+
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 67999999999999999999999865 57899999999999999999999999884 36889999999998877665
Q ss_pred cH----HHHHHHhCCchhHHHHHHHhccCcceEEEC--cEEEEEeCCCcccc
Q 026605 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTALSQ--KYSVCMVGCPLQLK 178 (236)
Q Consensus 133 f~----~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~--~~~~~~hg~~~~~~ 178 (236)
+. ......+-.....+++.+|++++|+..... +.++||+|.++.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 41 112222223456788999999999998653 47888888776554
No 18
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.97 E-value=4.6e-31 Score=224.47 Aligned_cols=179 Identities=19% Similarity=0.258 Sum_probs=124.2
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC----------CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC----------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~----------~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
||++||||||||+.+|+++|+++++. +.+++|||||+|||||+|.+|++++++++.. .++++|+||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~~--~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVAA--GAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhhC--CcEEEEECCcH
Confidence 68999999999999999999999764 2578999999999999999999999998643 37999999999
Q ss_pred ccccccccCc-------HHHHHHHhC--CchhHHHHHHHhccCcceEEEC-cEEEEEeCC-Ccccccc---------ccc
Q 026605 124 SRQITQVYGF-------YDECLRKYG--NANIWKIFTDLFDYFPLTALSQ-KYSVCMVGC-PLQLKLL---------IIS 183 (236)
Q Consensus 124 ~~~~~~~~~f-------~~e~~~~~~--~~~l~~~~~~~~~~LP~~~~~~-~~~~~~hg~-~~~~~~~---------~~~ 183 (236)
.++++...+. ..+....+. ...+.+++.+||++||+....+ +.++++||+ ++..... ...
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~~~~~~~~~~~ 158 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDSKRVRSFALYG 158 (234)
T ss_pred HHHHHHhcCCCccccCcccchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccchhheeeeecc
Confidence 9887643221 112233332 2456788999999999988753 345555554 4322100 000
Q ss_pred cceee--------eeccc--ccCCcEEEecC--------------ceeEeEecCCceeEEecCCCceEeecccccc
Q 026605 184 GTLIV--------FKRFL--MKGPCVICYGL--------------TQMIDVVGVSHLVVLDILLARTYLNNSIIQT 235 (236)
Q Consensus 184 ~~~~~--------~~~~~--~~~~~~~~~gh--------------~~~~~v~g~~~~~~l~~~~~~~~~~~~~~~~ 235 (236)
+.... ...+. -.....+++|| +||||||||.++ |+++++++.||+++--++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~vv~GHt~~~~~~~~~~~i~IDtGav~gG~Lt-~l~~~~~~~~~~~~~~~~ 233 (234)
T cd07423 159 DTTGETDEFGLPVRRDWAKEYRGDALVVYGHTPVPEPRWLNNTINIDTGCVFGGKLT-ALRYPEREIVSVPARQVY 233 (234)
T ss_pred cccCCcCCCCCccchhhHhhCCCCeEEEECCCCCccceEeCCEEEEECCCCCCCcce-EEECCCCcEEEeeccccc
Confidence 00000 00000 01224566776 788889987666 999999999999987654
No 19
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.97 E-value=6.4e-31 Score=225.10 Aligned_cols=177 Identities=21% Similarity=0.222 Sum_probs=124.6
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC---------CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccc
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC---------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~---------~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
||++||||||||+++|+++|+++++. +.+++|||||+|||||+|.+|+++++++. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 68999999999999999999998863 46789999999999999999999999884 34589999999999
Q ss_pred cccccccC-------cHHHHHHHhCC------chhHHHHHHHhccCcceEEE--CcEEEEEeCCCccc-c-cc-------
Q 026605 125 RQITQVYG-------FYDECLRKYGN------ANIWKIFTDLFDYFPLTALS--QKYSVCMVGCPLQL-K-LL------- 180 (236)
Q Consensus 125 ~~~~~~~~-------f~~e~~~~~~~------~~l~~~~~~~~~~LP~~~~~--~~~~~~~hg~~~~~-~-~~------- 180 (236)
++++...+ ...+....|.. ..+.+.+.+|++++|+.... ++.+|+|+|.++.. . ..
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~~~~~ 158 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKVQTFV 158 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhhhhHH
Confidence 88764422 11233444432 24667899999999998875 45666666644321 0 00
Q ss_pred -----------------------ccccceeeeecccccCCcEEEec---CceeEeEecCCceeEEecCCCceEeeccccc
Q 026605 181 -----------------------IISGTLIVFKRFLMKGPCVICYG---LTQMIDVVGVSHLVVLDILLARTYLNNSIIQ 234 (236)
Q Consensus 181 -----------------------~~~~~~~~~~~~~~~~~~~~~~g---h~~~~~v~g~~~~~~l~~~~~~~~~~~~~~~ 234 (236)
.......+++|...... ...+ .+||||+|||.++ |+++++++.+||++--+
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~vV~GHtp~~~~--~~~~~~i~IDtGa~~gG~Lt-al~l~~~~~~~v~~~~~ 235 (245)
T PRK13625 159 LYGDITGEKHPDGSPVRRDWAKEYKGTAWIVYGHTPVKEP--RFVNHTVNIDTGCVFGGRLT-ALRYPEMETVSVPSSLP 235 (245)
T ss_pred hhccccCCcCCCCCeeeeccchhcCCCcEEEECCCCCccc--eecCCeEEEECcCccCCEEE-EEECCCCcEEEEECccc
Confidence 00011223444332211 1111 3788888886666 99999999999998765
Q ss_pred c
Q 026605 235 T 235 (236)
Q Consensus 235 ~ 235 (236)
+
T Consensus 236 ~ 236 (245)
T PRK13625 236 F 236 (245)
T ss_pred c
Confidence 4
No 20
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.97 E-value=1.3e-30 Score=226.07 Aligned_cols=119 Identities=22% Similarity=0.291 Sum_probs=95.1
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
|+++||||||||+++|+++|+++++. ..|.++|+||+|||||+|.+|+++++++ +.++++|+||||.+++...++
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 68999999999999999999999864 6789999999999999999999999987 236999999999988765544
Q ss_pred cH----HHHHHHhCCchhHHHHHHHhccCcceEE--ECcEEEEEeCCCcc
Q 026605 133 FY----DECLRKYGNANIWKIFTDLFDYFPLTAL--SQKYSVCMVGCPLQ 176 (236)
Q Consensus 133 f~----~e~~~~~~~~~l~~~~~~~~~~LP~~~~--~~~~~~~~hg~~~~ 176 (236)
.. ......+-.....+.+.+|++++|+... .++.+++|+|.++.
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~ 126 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQ 126 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCC
Confidence 32 1122233233456778999999999988 55677777776654
No 21
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.96 E-value=1.2e-28 Score=208.15 Aligned_cols=167 Identities=19% Similarity=0.207 Sum_probs=118.8
Q ss_pred eeEecCCCccHHHHHHHHHhcCCC--------CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccccc
Q 026605 56 VTICGDIHGQFHDLAELFQIGGKC--------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 127 (236)
Q Consensus 56 i~vigDIHG~~~~L~~ll~~~~~~--------~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (236)
.+||||||||+++|+++|+++++. +.+++|||||||||||+|.+|+++++++.. +.++++|+||||.+++
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll 78 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAI 78 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHH
Confidence 369999999999999999998764 567999999999999999999999999854 3479999999999887
Q ss_pred ccccC------cH-----------HHHHHHhC-CchhHHHHHHHhccCcceEEECcEEEEEeCCCccc---cc-------
Q 026605 128 TQVYG------FY-----------DECLRKYG-NANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQL---KL------- 179 (236)
Q Consensus 128 ~~~~~------f~-----------~e~~~~~~-~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg~~~~~---~~------- 179 (236)
....+ +. .+..+.++ ..+..+.+.+||++||+....++.+|||+|..... ..
T Consensus 79 ~~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~VHAg~~~~l~~~~~~~~~~~~ 158 (222)
T cd07413 79 AWHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDLGGVRVVHACWDETLLKGPEIALPEGH 158 (222)
T ss_pred HhhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEECCEEEEECCcCHhhccCCCcCCCCCc
Confidence 53221 00 12233332 23456889999999999999999999988754211 00
Q ss_pred cc--------------cccceeeeecccccCCcEEEec---CceeEeEecCCceeEEecCCCc
Q 026605 180 LI--------------ISGTLIVFKRFLMKGPCVICYG---LTQMIDVVGVSHLVVLDILLAR 225 (236)
Q Consensus 180 ~~--------------~~~~~~~~~~~~~~~~~~~~~g---h~~~~~v~g~~~~~~l~~~~~~ 225 (236)
.. ......+++|+......+...+ .+||||+|||.+| |++++++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~Vv~GHt~~~~~~~~~~~~~i~iDTGA~~~G~Lt-a~~~~~~~ 220 (222)
T cd07413 159 SFVDKDGIVRDNIRVKWWGKPVFVGHYWLNGEPAPLNPNVACLDYSAAKGGKLV-AYRWDGED 220 (222)
T ss_pred eeecCCCccccccchhhcCCCEEEecCCCCCCCccccCCEEEEecccccCCeeE-EEEcCCcc
Confidence 00 1124456777765432122223 3677777775555 99998764
No 22
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.96 E-value=7.8e-29 Score=212.89 Aligned_cols=117 Identities=24% Similarity=0.307 Sum_probs=94.0
Q ss_pred eeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcH
Q 026605 56 VTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (236)
Q Consensus 56 i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 134 (236)
++||||||||+++|+++|+++++. +.|+++|+||+|||||+|.||++++++++ .++++|+||||.++++..+++.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 589999999999999999999875 67899999999999999999999999985 3799999999999876554432
Q ss_pred ----HHHHHHhCCchhHHHHHHHhccCcceEEEC--cEEEEEeCCCcc
Q 026605 135 ----DECLRKYGNANIWKIFTDLFDYFPLTALSQ--KYSVCMVGCPLQ 176 (236)
Q Consensus 135 ----~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~--~~~~~~hg~~~~ 176 (236)
.+....+-.....+++.+|++++|+....+ +.++||+|.++.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~ 124 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQ 124 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCC
Confidence 112222222344578999999999999876 577777776653
No 23
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.96 E-value=2.3e-28 Score=205.91 Aligned_cols=118 Identities=20% Similarity=0.234 Sum_probs=89.1
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccccccccc
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (236)
.+|++||||||||+++|+++|+++++. ..++++||||+|||||+|.+|++++++. ++++|+||||.++++...
T Consensus 16 ~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~~------~~~~v~GNHE~~~l~~~~ 89 (218)
T PRK11439 16 WRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEEH------WVRAVRGNHEQMALDALA 89 (218)
T ss_pred CCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHcC------CceEeeCchHHHHHHHHH
Confidence 359999999999999999999999876 6789999999999999999999999764 688999999999886432
Q ss_pred CcHHHHH--------HHhCC--chhHHHHHHHhccCcceEEE----CcEEEEEeCCCcc
Q 026605 132 GFYDECL--------RKYGN--ANIWKIFTDLFDYFPLTALS----QKYSVCMVGCPLQ 176 (236)
Q Consensus 132 ~f~~e~~--------~~~~~--~~l~~~~~~~~~~LP~~~~~----~~~~~~~hg~~~~ 176 (236)
+-..... ..... .+.+..+.+|+++||+...+ ++.+|||+|.|..
T Consensus 90 ~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~ 148 (218)
T PRK11439 90 SQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPAD 148 (218)
T ss_pred CCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCC
Confidence 2100001 11111 23456677999999999763 3466666665533
No 24
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=218.29 Aligned_cols=169 Identities=28% Similarity=0.516 Sum_probs=156.5
Q ss_pred CCccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCccccC----CceeEecCCCccHHHHHHHHHhcCCCCCc-e
Q 026605 9 DTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQIGGKCPDT-N 83 (236)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~----~~i~vigDIHG~~~~L~~ll~~~~~~~~~-~ 83 (236)
.++.+++.+|+-+.....+.+..+..++.+|+++|++.|++-++. ..+.|+||+||.+++|.-+|.+.|.+..+ .
T Consensus 116 l~~~~i~~lieaFk~kq~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~np 195 (631)
T KOG0377|consen 116 LRKNHIDLLIEAFKKKQRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNP 195 (631)
T ss_pred cCchHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCC
Confidence 567789999999999999999999999999999999999998763 47999999999999999999999977654 5
Q ss_pred EEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCC--chhHHHHHHHhccCcceE
Q 026605 84 YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGN--ANIWKIFTDLFDYFPLTA 161 (236)
Q Consensus 84 ~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~--~~l~~~~~~~~~~LP~~~ 161 (236)
+||.||+||||..|+|+|..|+++.+.+|..+++-|||||+.++|..|||.+|...+|.. ..+...+.++|++||++.
T Consensus 196 YvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~t 275 (631)
T KOG0377|consen 196 YVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGT 275 (631)
T ss_pred eeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhh
Confidence 999999999999999999999999999999999999999999999999999999999964 578888999999999999
Q ss_pred EECcEEEEEeCCCccc
Q 026605 162 LSQKYSVCMVGCPLQL 177 (236)
Q Consensus 162 ~~~~~~~~~hg~~~~~ 177 (236)
+++..+++.||+.++.
T Consensus 276 iid~~ilvvHGGiSd~ 291 (631)
T KOG0377|consen 276 IIDSRILVVHGGISDS 291 (631)
T ss_pred hcccceEEEecCcccc
Confidence 9999999999997654
No 25
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.93 E-value=3.7e-25 Score=186.10 Aligned_cols=118 Identities=44% Similarity=0.774 Sum_probs=97.0
Q ss_pred eEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHH
Q 026605 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136 (236)
Q Consensus 57 ~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 136 (236)
+||||||||+.+|.++++.++..+.+.+||+||+||||+.+.+++.++++++.. |.++++|+||||.+.++...++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888999999999999999999999999999776 7799999999999988766554332
Q ss_pred H--------HHHhCCchhHHHHHHHhccCcceEEECc-EEEEEeCCCc
Q 026605 137 C--------LRKYGNANIWKIFTDLFDYFPLTALSQK-YSVCMVGCPL 175 (236)
Q Consensus 137 ~--------~~~~~~~~l~~~~~~~~~~LP~~~~~~~-~~~~~hg~~~ 175 (236)
. ...+....+++.+.+|+.+||+...++. .++|+||++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~ 127 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLS 127 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCC
Confidence 1 2233345678889999999999998873 4444455443
No 26
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.93 E-value=2e-25 Score=187.96 Aligned_cols=116 Identities=21% Similarity=0.274 Sum_probs=84.7
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
.|++||||||||+++|+++|+.+.+. ..+.++|+||+|||||+|.++++++.+. ++++||||||.++++....
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~~------~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQP------WFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhhC------CcEEEECchHHHHHHHHhc
Confidence 49999999999999999999999854 6789999999999999999999999753 6899999999988764321
Q ss_pred cHH--------HHHHHhCC--chhHHHHHHHhccCcceEEE---C-cEEEEEeCCCc
Q 026605 133 FYD--------ECLRKYGN--ANIWKIFTDLFDYFPLTALS---Q-KYSVCMVGCPL 175 (236)
Q Consensus 133 f~~--------e~~~~~~~--~~l~~~~~~~~~~LP~~~~~---~-~~~~~~hg~~~ 175 (236)
-.. +....... ........+|+++||+.... + +.++||+|.|.
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~ 145 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPG 145 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCC
Confidence 000 00111111 11234456799999998864 2 35666555443
No 27
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.93 E-value=4.2e-25 Score=184.53 Aligned_cols=115 Identities=21% Similarity=0.263 Sum_probs=88.8
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
+|+++|||||||+.+|+++++.+++. ..+.++|+||++|||+++.++++++.+. ++++|+||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~~------~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLEP------WFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhcC------CEEEeECCChHHHHhHhhC
Confidence 58999999999999999999998764 5788999999999999999999999762 6999999999998875533
Q ss_pred --cHHHHHHHhCC--------chhHHHHHHHhccCcceEEE---CcEEEEEeCCC
Q 026605 133 --FYDECLRKYGN--------ANIWKIFTDLFDYFPLTALS---QKYSVCMVGCP 174 (236)
Q Consensus 133 --f~~e~~~~~~~--------~~l~~~~~~~~~~LP~~~~~---~~~~~~~hg~~ 174 (236)
...+...+.+. .++.+.+.+||++||+...+ +.+++++||++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~ 129 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADY 129 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCC
Confidence 22222223322 12456688999999999874 24566666543
No 28
>PHA02239 putative protein phosphatase
Probab=99.92 E-value=1.6e-24 Score=184.22 Aligned_cols=121 Identities=25% Similarity=0.396 Sum_probs=95.3
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC--CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccccccccc
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~--~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (236)
|++++|||||||+.+|+++++.+... +.+.+||+|||||||++|.+++..++++.. .+.++++|+||||.++++...
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHHh
Confidence 68999999999999999999988543 468899999999999999999999998753 345899999999998765331
Q ss_pred C----------c----HHHHHHHhCCc------------------------------hhHHHHHHHhccCcceEEECcEE
Q 026605 132 G----------F----YDECLRKYGNA------------------------------NIWKIFTDLFDYFPLTALSQKYS 167 (236)
Q Consensus 132 ~----------f----~~e~~~~~~~~------------------------------~l~~~~~~~~~~LP~~~~~~~~~ 167 (236)
. + ..+....|+.. ...+.+.+|+++||+....++++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~~~i 159 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKEDKYI 159 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEECCEE
Confidence 1 0 02334555411 12355677999999999999999
Q ss_pred EEEeCCCc
Q 026605 168 VCMVGCPL 175 (236)
Q Consensus 168 ~~~hg~~~ 175 (236)
|||+|..+
T Consensus 160 fVHAGi~p 167 (235)
T PHA02239 160 FSHSGGVS 167 (235)
T ss_pred EEeCCCCC
Confidence 99999754
No 29
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.92 E-value=2.5e-24 Score=186.24 Aligned_cols=175 Identities=16% Similarity=0.174 Sum_probs=122.6
Q ss_pred ceeEecCCCccHHHHHHHHHhcCCC------CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCC-CeEEEccCcccccc
Q 026605 55 PVTICGDIHGQFHDLAELFQIGGKC------PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQ-RITILRGNHESRQI 127 (236)
Q Consensus 55 ~i~vigDIHG~~~~L~~ll~~~~~~------~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~-~v~~lrGNHE~~~~ 127 (236)
++++|||||||+++|+++|+.+... ..+.+|||||||||||+|.+|+++|++++..+|. ++++|+||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6999999999999999999876432 3457999999999999999999999999888875 68899999998765
Q ss_pred ccccC-----------------------------------------c----------------------HHHHHHHhCC-
Q 026605 128 TQVYG-----------------------------------------F----------------------YDECLRKYGN- 143 (236)
Q Consensus 128 ~~~~~-----------------------------------------f----------------------~~e~~~~~~~- 143 (236)
..... + ..+...+||-
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 42211 0 0233455552
Q ss_pred -------chhHHHHHHHhccCcceEEECcE-------------EEEEeCCCccccccccc-c-----------ceee-ee
Q 026605 144 -------ANIWKIFTDLFDYFPLTALSQKY-------------SVCMVGCPLQLKLLIIS-G-----------TLIV-FK 190 (236)
Q Consensus 144 -------~~l~~~~~~~~~~LP~~~~~~~~-------------~~~~hg~~~~~~~~~~~-~-----------~~~~-~~ 190 (236)
..+.+...+|+++||.....++. +|||+|.-+...-.-.. . +... ..
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~~~~l~~R~ 242 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPKIAPLSGRK 242 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeCcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccccccccccch
Confidence 24567899999999999987777 89988875433200000 0 0000 01
Q ss_pred cc-c-----ccCCcEEEecC------------ceeEeEecCCceeEEecCCCceEee
Q 026605 191 RF-L-----MKGPCVICYGL------------TQMIDVVGVSHLVVLDILLARTYLN 229 (236)
Q Consensus 191 ~~-~-----~~~~~~~~~gh------------~~~~~v~g~~~~~~l~~~~~~~~~~ 229 (236)
.+ . .....++.-|| +|||..|++.+++|+-+..+++.+.
T Consensus 243 ~f~~~~~~~~~~~~~VVhGHt~~~~~~~~Ri~iDtGa~~~~~l~aa~vlp~~~~~~~ 299 (304)
T cd07421 243 NVWNIPQELADKKTIVVSGHHGKLHIDGLRLIIDEGGGFDDRPIAAIVLPSKEIIRD 299 (304)
T ss_pred hhhcCcccccCCCeEEEECCCCCceecCCEEEEECCCCcCCceeEEEEeccceeEec
Confidence 11 1 11133445565 5666688899999999999988763
No 30
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.91 E-value=2.5e-24 Score=180.12 Aligned_cols=167 Identities=17% Similarity=0.146 Sum_probs=114.9
Q ss_pred eEecCCCccHHHHHHHHHhcCC--------CCCceEEEeccccCCCCCCHHHHHHHHHhhhh---CCCCeEEEccCcccc
Q 026605 57 TICGDIHGQFHDLAELFQIGGK--------CPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---YPQRITILRGNHESR 125 (236)
Q Consensus 57 ~vigDIHG~~~~L~~ll~~~~~--------~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~---~p~~v~~lrGNHE~~ 125 (236)
+||||||||+++|+++|+.++. .+.+.+||+||+||||++|.++++++++++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999998874 46789999999999999999999999999754 356799999999999
Q ss_pred ccccccCcH--H---HHHHH-hCCc---hhHHHHHHHhccCcceEEECcEEEEEeCCCcccc-cccccccee------ee
Q 026605 126 QITQVYGFY--D---ECLRK-YGNA---NIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLK-LLIISGTLI------VF 189 (236)
Q Consensus 126 ~~~~~~~f~--~---e~~~~-~~~~---~l~~~~~~~~~~LP~~~~~~~~~~~~hg~~~~~~-~~~~~~~~~------~~ 189 (236)
.++..+.+. . +.... +... .....+.+|++++|+....++.+|+|+|..+.+. .+....... ..
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~~~~fvHag~~~~w~r~y~~~~~~~~~~~~~~~ 160 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVNDTLFVHGGLGPLWYRGYSKETSDKECAAAHLD 160 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEECCEEEEeCCcHHHHhhHhhhhhhhccchHHHHH
Confidence 886543221 1 11111 0001 1224568999999999999998888777533332 222111111 11
Q ss_pred ecccccCCcEEEecCceeEeE---ecCCceeEEecCC
Q 026605 190 KRFLMKGPCVICYGLTQMIDV---VGVSHLVVLDILL 223 (236)
Q Consensus 190 ~~~~~~~~~~~~~gh~~~~~v---~g~~~~~~l~~~~ 223 (236)
..+.....+.+++||++.-.+ +-++....++...
T Consensus 161 ~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 161 KVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred HHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 223444668899999998773 4455544555444
No 31
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.82 E-value=3.6e-21 Score=173.76 Aligned_cols=190 Identities=29% Similarity=0.515 Sum_probs=157.1
Q ss_pred ccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCcccc----CCceeEecCCCccHHHHHHHHHhcCCCC-CceEE
Q 026605 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV----KSPVTICGDIHGQFHDLAELFQIGGKCP-DTNYL 85 (236)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~----~~~i~vigDIHG~~~~L~~ll~~~~~~~-~~~~v 85 (236)
++.+..+.+.+.+...++...+-.|+..+.++++++|++++. ..++.++||+||++.++.++++..+.++ ...++
T Consensus 167 ~e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~yl 246 (476)
T KOG0376|consen 167 LEFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYL 246 (476)
T ss_pred HHHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCccccc
Confidence 334444555556677788888889999999999999998765 4579999999999999999999988765 45799
Q ss_pred EeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECc
Q 026605 86 FMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQK 165 (236)
Q Consensus 86 ~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~ 165 (236)
|.||++|||..|.|+...+...++.+|+++|+.|||||...++..++|.+++..+|. ++.+..+.+.|..||++..+++
T Consensus 247 fngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyt-e~~~~~f~~~f~~LPl~~~i~~ 325 (476)
T KOG0376|consen 247 FNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYT-EEMFNLFSEVFIWLPLAHLINN 325 (476)
T ss_pred ccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhH-HHHHHhhhhhhccccchhhhcC
Confidence 999999999999999999999999999999999999999999999999999999995 5666667799999999999998
Q ss_pred EEEEEeCCCccccccccccceeeeecccccCCcEEEe
Q 026605 166 YSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICY 202 (236)
Q Consensus 166 ~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (236)
.++++||+.... ..+...+...+.|+.+++....+|
T Consensus 326 ~~~~~hgglf~~-~~v~l~d~r~i~r~~~~~~~~~~~ 361 (476)
T KOG0376|consen 326 KVLVMHGGLFSP-DGVTLEDFRNIDRFEQPPEEGLMC 361 (476)
T ss_pred ceEEEecCcCCC-CCccHHHHHhhhhccCCccccccc
Confidence 888888876543 334445555566665555544443
No 32
>PRK09453 phosphodiesterase; Provisional
Probab=99.61 E-value=7e-15 Score=120.30 Aligned_cols=69 Identities=20% Similarity=0.313 Sum_probs=58.7
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCC--------CHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY--------SVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~--------s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
||++++||+||++.+++++++.+...+.+.++++||++++|+. +.++++++.++. .++++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcch
Confidence 7899999999999999999999877788999999999999873 466777776552 2699999999975
Q ss_pred c
Q 026605 126 Q 126 (236)
Q Consensus 126 ~ 126 (236)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.51 E-value=1.5e-13 Score=109.10 Aligned_cols=125 Identities=20% Similarity=0.215 Sum_probs=85.2
Q ss_pred ceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcH
Q 026605 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFY 134 (236)
Q Consensus 55 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~ 134 (236)
|++++||+||+..+++++++.+.. .+.++++||++++++.+. + .....+++|+||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 589999999999999999998865 789999999999998765 1 112369999999998632
Q ss_pred HHHHHHhCCchhHHHHHHHhccCcceEE---ECcEEEEEeCCCccccccccccceeeeecccccCCcEEEecCceeEeEe
Q 026605 135 DECLRKYGNANIWKIFTDLFDYFPLTAL---SQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVV 211 (236)
Q Consensus 135 ~e~~~~~~~~~l~~~~~~~~~~LP~~~~---~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~~v~ 211 (236)
+..+|.... .+.++++.||.+....... .. .........+++++||++.....
T Consensus 62 -------------------~~~~p~~~~~~~~g~~i~v~Hg~~~~~~~~~--~~---~~~~~~~~~d~vi~GHtH~~~~~ 117 (155)
T cd00841 62 -------------------FPILPEEAVLEIGGKRIFLTHGHLYGVKNGL--DR---LYLAKEGGADVVLYGHTHIPVIE 117 (155)
T ss_pred -------------------cccCCceEEEEECCEEEEEECCcccccccch--hh---hhhhhhcCCCEEEECcccCCccE
Confidence 345665443 3558999999875442211 00 11123345578899988876643
Q ss_pred c-CCceeEEecCC
Q 026605 212 G-VSHLVVLDILL 223 (236)
Q Consensus 212 g-~~~~~~l~~~~ 223 (236)
- ++.+ .++.++
T Consensus 118 ~~~~~~-~inpGs 129 (155)
T cd00841 118 KIGGVL-LLNPGS 129 (155)
T ss_pred EECCEE-EEeCCC
Confidence 3 3333 555554
No 34
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.45 E-value=3.6e-13 Score=107.60 Aligned_cols=130 Identities=15% Similarity=0.109 Sum_probs=83.0
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
||++++||+||+..+++++++.+... +.+.++++||++ +.++++.+.++. ..++.++||||...
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~~------ 65 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGER------ 65 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCchh------
Confidence 78999999999999888888877765 789999999998 467888877652 15999999999841
Q ss_pred cHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeCCCccccccccccceeeeecc-cccCCcEEEecCceeEeEe
Q 026605 133 FYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRF-LMKGPCVICYGLTQMIDVV 211 (236)
Q Consensus 133 f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gh~~~~~v~ 211 (236)
..+....++. ..+.++++.||.+..... .......+ .....+++++||++...+.
T Consensus 66 ------------------~~~~~~~~~~-~~g~~i~l~Hg~~~~~~~-----~~~~l~~~~~~~~~d~vi~GHtH~~~~~ 121 (158)
T TIGR00040 66 ------------------DELPEEEIFE-AEGIDFGLVHGDLVYPRG-----DLLVLEYLAKELGVDVLIFGHTHIPVAE 121 (158)
T ss_pred ------------------hhCCcceEEE-ECCEEEEEEeCcccccCC-----CHHHHHHHHhccCCCEEEECCCCCCccE
Confidence 0111222221 235678899987421110 01111111 2234567888988876532
Q ss_pred c-CCceeEEecCC
Q 026605 212 G-VSHLVVLDILL 223 (236)
Q Consensus 212 g-~~~~~~l~~~~ 223 (236)
. ++.+ .+++++
T Consensus 122 ~~~~~~-~iNpGs 133 (158)
T TIGR00040 122 ELRGIL-LINPGS 133 (158)
T ss_pred EECCEE-EEECCc
Confidence 2 2333 556655
No 35
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.39 E-value=5e-13 Score=104.02 Aligned_cols=76 Identities=22% Similarity=0.291 Sum_probs=58.5
Q ss_pred CceeEecCCCccHHHH----HHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHH--HHhhhhCCCCeEEEccCcccccc
Q 026605 54 SPVTICGDIHGQFHDL----AELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLL--VALKVRYPQRITILRGNHESRQI 127 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L----~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l--~~lk~~~p~~v~~lrGNHE~~~~ 127 (236)
+||+++||+|+..... ..+.+.....+.+.+|++||+++++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 5899999999999877 45555555677889999999999999887766654 33344455689999999999865
Q ss_pred cc
Q 026605 128 TQ 129 (236)
Q Consensus 128 ~~ 129 (236)
..
T Consensus 81 ~~ 82 (200)
T PF00149_consen 81 NS 82 (200)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 36
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.39 E-value=8e-13 Score=104.24 Aligned_cols=136 Identities=16% Similarity=0.239 Sum_probs=84.6
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCc
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGF 133 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f 133 (236)
||++++||+|++..++.++++.+ ...+.++++||++++ .++++.+.+. .+++|+||||.........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~- 67 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNEND- 67 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEEC-
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhh-
Confidence 79999999999999999999998 458889999999993 7788888666 5999999999754222111
Q ss_pred HHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeCCCccccccccccceeeeecccccCCcEEEecCceeEeEecC
Q 026605 134 YDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGV 213 (236)
Q Consensus 134 ~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~~v~g~ 213 (236)
.+. +.... .....+..+++.||.+.... .........+.....+.+++||++...++-.
T Consensus 68 ----------~~~------~~~~~-~~~~~~~~i~~~H~~~~~~~----~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 126 (156)
T PF12850_consen 68 ----------EEY------LLDAL-RLTIDGFKILLSHGHPYDVQ----WDPAELREILSRENVDLVLHGHTHRPQVFKI 126 (156)
T ss_dssp ----------TCS------SHSEE-EEEETTEEEEEESSTSSSST----TTHHHHHHHHHHTTSSEEEESSSSSEEEEEE
T ss_pred ----------ccc------cccce-eeeecCCeEEEECCCCcccc----cChhhhhhhhcccCCCEEEcCCcccceEEEE
Confidence 001 11111 11223668888888765532 1111122344566778899999999886532
Q ss_pred CceeEEecCC
Q 026605 214 SHLVVLDILL 223 (236)
Q Consensus 214 ~~~~~l~~~~ 223 (236)
+-...+++++
T Consensus 127 ~~~~~~~~Gs 136 (156)
T PF12850_consen 127 GGIHVINPGS 136 (156)
T ss_dssp TTEEEEEE-G
T ss_pred CCEEEEECCc
Confidence 2233555443
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.24 E-value=1.3e-11 Score=96.06 Aligned_cols=111 Identities=18% Similarity=0.183 Sum_probs=71.4
Q ss_pred ceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCH--HHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 55 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~--e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
+++++||+||++. .....+.|.++++||+++++..+. +.++++.+++ .| .++++.||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~~-~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--HP-HKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--CC-eEEEEECCCCCcCC-----
Confidence 5899999999987 223356788999999999886432 3555555542 12 36789999997521
Q ss_pred cHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeCCCccccccccc----cceeeeecccccCCcEEEecCceeE
Q 026605 133 FYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQLKLLIIS----GTLIVFKRFLMKGPCVICYGLTQMI 208 (236)
Q Consensus 133 f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~gh~~~~ 208 (236)
..+..+++.||+|.....+... ......+.......+++++||++..
T Consensus 66 -----------------------------~~~~~ilv~H~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~ 116 (135)
T cd07379 66 -----------------------------PEDTDILVTHGPPYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEG 116 (135)
T ss_pred -----------------------------CCCCEEEEECCCCCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCc
Confidence 2355788999988654332211 1111122223345688999999887
Q ss_pred e
Q 026605 209 D 209 (236)
Q Consensus 209 ~ 209 (236)
.
T Consensus 117 ~ 117 (135)
T cd07379 117 Y 117 (135)
T ss_pred C
Confidence 5
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.22 E-value=9e-11 Score=99.74 Aligned_cols=151 Identities=17% Similarity=0.147 Sum_probs=96.7
Q ss_pred ceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccc----
Q 026605 55 PVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV---- 130 (236)
Q Consensus 55 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~---- 130 (236)
||+++|||||++.... .+.+.....|.++++||+++ .+.+++..+.++ +..+++++||||.+.....
T Consensus 2 rIa~isDiHg~~~~~~--~~~l~~~~pD~Vl~~GDi~~---~~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k~ 72 (238)
T cd07397 2 RIAIVGDVHGQWDLED--IKALHLLQPDLVLFVGDFGN---ESVQLVRAISSL----PLPKAVILGNHDAWYDATFRKKG 72 (238)
T ss_pred EEEEEecCCCCchHHH--HHHHhccCCCEEEECCCCCc---ChHHHHHHHHhC----CCCeEEEcCCCcccccccccchH
Confidence 7899999999987632 22333445689999999986 356777777665 2369999999998653210
Q ss_pred --------------------------------cC--------cH-HHHHHHhCCchhHHHHHHHhccCcceEEECcEEEE
Q 026605 131 --------------------------------YG--------FY-DECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVC 169 (236)
Q Consensus 131 --------------------------------~~--------f~-~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~ 169 (236)
.+ +. .++...|+....++.+...++.++........+++
T Consensus 73 ~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vli 152 (238)
T cd07397 73 DRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLILL 152 (238)
T ss_pred HHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEEE
Confidence 00 01 24566676667778888888888744445667899
Q ss_pred EeCCCccccc-------------cccccceee---eeccc-ccCCcEEEecCceeEeEecCC
Q 026605 170 MVGCPLQLKL-------------LIISGTLIV---FKRFL-MKGPCVICYGLTQMIDVVGVS 214 (236)
Q Consensus 170 ~hg~~~~~~~-------------~~~~~~~~~---~~~~~-~~~~~~~~~gh~~~~~v~g~~ 214 (236)
.|+++...-+ .....++.. +.... ....+...+||++-.--||.+
T Consensus 153 aH~~~~G~g~~~~~~cg~d~~~~~~~~G~~~l~~ai~~~~~~~~~~l~~fGH~H~~l~~~~~ 214 (238)
T cd07397 153 AHNGPSGLGSDAEDPCGRDWKPPGGDWGDPDLALAISQIQQGRQVPLVVFGHMHHRLRRGKG 214 (238)
T ss_pred eCcCCcCCCcccccccccccCCcCCCCCCHHHHHHHHHHhccCCCCEEEeCCccCccccccc
Confidence 9988764410 011112222 22222 233467788999998778854
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.14 E-value=1e-10 Score=98.92 Aligned_cols=72 Identities=11% Similarity=0.168 Sum_probs=61.1
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
.+|+.++||||||+.+++++++.+...+.|.+|++||++++|+.+.++..++..+... +..+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 3689999999999999999999887778899999999999998777777777766432 22699999999985
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=99.08 E-value=8.1e-10 Score=90.28 Aligned_cols=126 Identities=17% Similarity=0.141 Sum_probs=76.4
Q ss_pred ceeEecCCC-ccHH-HHH-HHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccccccccc
Q 026605 55 PVTICGDIH-GQFH-DLA-ELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (236)
Q Consensus 55 ~i~vigDIH-G~~~-~L~-~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (236)
+|.||||.| |... .+. .+++.+...+.+.++++||+++ .+++.++..+. + +++.|+||||...
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~-----~~~~~~l~~~~---~-~~~~V~GN~D~~~----- 66 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCS-----KETYDYLKTIA---P-DVHIVRGDFDENL----- 66 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCC-----HHHHHHHHhhC---C-ceEEEECCCCccc-----
Confidence 478999999 6532 122 2334443356789999999987 77888887652 1 5999999999741
Q ss_pred CcHHHHHHHhCCchhHHHHHHHhccCcceEE---ECcEEEEEeCCCccccccccccceeeeecccccCCcEEEecCceeE
Q 026605 132 GFYDECLRKYGNANIWKIFTDLFDYFPLTAL---SQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMI 208 (236)
Q Consensus 132 ~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~---~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~ 208 (236)
.+|.... .+.++++.||.+..... ..............+++++||++--
T Consensus 67 ------------------------~lp~~~~~~~~g~~i~l~HG~~~~~~~----~~~~~~~~~~~~~~dvii~GHTH~p 118 (178)
T cd07394 67 ------------------------NYPETKVITVGQFKIGLIHGHQVVPWG----DPDSLAALQRQLDVDILISGHTHKF 118 (178)
T ss_pred ------------------------cCCCcEEEEECCEEEEEEECCcCCCCC----CHHHHHHHHHhcCCCEEEECCCCcc
Confidence 3454433 46699999996532110 0111111122345578899988865
Q ss_pred eE-ecCCceeEEecCC
Q 026605 209 DV-VGVSHLVVLDILL 223 (236)
Q Consensus 209 ~v-~g~~~~~~l~~~~ 223 (236)
.+ +-++.+ .+++++
T Consensus 119 ~~~~~~g~~-viNPGS 133 (178)
T cd07394 119 EAFEHEGKF-FINPGS 133 (178)
T ss_pred eEEEECCEE-EEECCC
Confidence 52 223333 566654
No 41
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.01 E-value=2.1e-09 Score=93.45 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=55.6
Q ss_pred CCceeEecCCCcc----HHHHHHHHHhcCCCCCceEEEeccccCCC-C-CCHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 53 KSPVTICGDIHGQ----FHDLAELFQIGGKCPDTNYLFMGDYVDRG-Y-YSVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 53 ~~~i~vigDIHG~----~~~L~~ll~~~~~~~~~~~v~LGD~vdrG-~-~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
++|++++||+|.. ...+.++++.+...+.|-+++.||++|++ + ...+..+.+..++... .++.+.||||..
T Consensus 49 ~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~~--pv~~V~GNHD~~ 125 (271)
T PRK11340 49 PFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAECA--PTFACFGNHDRP 125 (271)
T ss_pred CcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhcC--CEEEecCCCCcc
Confidence 4799999999976 56688888887777888999999999954 2 2344666777776543 599999999975
No 42
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.92 E-value=5.1e-09 Score=87.64 Aligned_cols=72 Identities=22% Similarity=0.220 Sum_probs=57.1
Q ss_pred CCceeEecCCCccHH----HHHHHHHhcCCCCCceEEEeccccCCCCCCH-HHHHHHHHhhhhCCCCeEEEccCccccc
Q 026605 53 KSPVTICGDIHGQFH----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLLVALKVRYPQRITILRGNHESRQ 126 (236)
Q Consensus 53 ~~~i~vigDIHG~~~----~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~-e~l~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (236)
+++++++||+|.... .++++++.+.....+.+++.||+++.+.... +..+++..++. +..++++.||||...
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD~~~ 77 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHDYYS 77 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCccccc
Confidence 478999999998743 7888888887777889999999999987764 56666666543 336999999999864
No 43
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.91 E-value=4.3e-09 Score=81.53 Aligned_cols=56 Identities=20% Similarity=0.133 Sum_probs=42.6
Q ss_pred eEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 57 TICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 57 ~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
.|+||.||..+.+.++... ..+.|.++++||+. .+++..+.+++ ...++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHD 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCc
Confidence 4899999998888877664 47788999999973 45566666542 124899999999
No 44
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.88 E-value=4e-09 Score=84.68 Aligned_cols=67 Identities=21% Similarity=0.146 Sum_probs=49.0
Q ss_pred eeEecCCCccHHHHHHHH-HhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 56 VTICGDIHGQFHDLAELF-QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 56 i~vigDIHG~~~~L~~ll-~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
++++||+|++...+...+ +.....+.|.++++||+++++..+.... ++... ..+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~~~--~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLLAL--KGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHHhh--cCCccEEEeCCCcceE
Confidence 578999999988776665 3345567788999999999887655443 22222 2234699999999986
No 45
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.86 E-value=1.5e-08 Score=76.21 Aligned_cols=67 Identities=24% Similarity=0.396 Sum_probs=49.6
Q ss_pred eEecCCCccHHHHHHHH--HhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 57 TICGDIHGQFHDLAELF--QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 57 ~vigDIHG~~~~L~~ll--~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
+++||+|+......... ......+.+.++++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47999999998887765 44445667889999999999888766554422222233457999999999
No 46
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.78 E-value=9.9e-09 Score=83.21 Aligned_cols=66 Identities=23% Similarity=0.323 Sum_probs=49.4
Q ss_pred eeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCC-HHHHHHHHHhhhhCCCCeEEEccCcccccc
Q 026605 56 VTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-VETVTLLVALKVRYPQRITILRGNHESRQI 127 (236)
Q Consensus 56 i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s-~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (236)
|+++||+||++.++.+ ..+...+.|.+|+.||+++++... .+.+..+.++ +..+++++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHHH
Confidence 5799999999999887 444556778999999999998753 3333444333 3369999999998654
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.74 E-value=7.3e-08 Score=75.27 Aligned_cols=68 Identities=22% Similarity=0.236 Sum_probs=45.3
Q ss_pred eeEecCCCccH----------HHHHHHHHhcCCCCCceEEEeccccCCCCCC--HHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 56 VTICGDIHGQF----------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 56 i~vigDIHG~~----------~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s--~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
++.+||+|=.. ..|.++++.+...+.+.++++||+++.|... .+..+++..+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 46899999221 1133456666667789999999999988642 22344555553321 26999999999
Q ss_pred c
Q 026605 124 S 124 (236)
Q Consensus 124 ~ 124 (236)
.
T Consensus 80 ~ 80 (144)
T cd07400 80 V 80 (144)
T ss_pred E
Confidence 8
No 48
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.68 E-value=8e-08 Score=78.05 Aligned_cols=87 Identities=14% Similarity=0.156 Sum_probs=62.6
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
.|++.|+||.|++..+-++..+.....+.+.+|.+||++...... .+.. ....+++.|+||.|.....
T Consensus 1 ~m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~~-----~l~~---~~~~~i~~V~GN~D~~~~~---- 68 (172)
T COG0622 1 MMKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTLD-----ALEG---GLAAKLIAVRGNCDGEVDQ---- 68 (172)
T ss_pred CcEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccchH-----Hhhc---ccccceEEEEccCCCcccc----
Confidence 378999999999998777777777778889999999999765422 1211 0123799999999986321
Q ss_pred cHHHHHHHhCCchhHHHHHHHhccCcceE---EECcEEEEEeCC
Q 026605 133 FYDECLRKYGNANIWKIFTDLFDYFPLTA---LSQKYSVCMVGC 173 (236)
Q Consensus 133 f~~e~~~~~~~~~l~~~~~~~~~~LP~~~---~~~~~~~~~hg~ 173 (236)
..+|... +.+.++++.||.
T Consensus 69 ----------------------~~~p~~~~~~~~g~ki~l~HGh 90 (172)
T COG0622 69 ----------------------EELPEELVLEVGGVKIFLTHGH 90 (172)
T ss_pred ----------------------ccCChhHeEEECCEEEEEECCC
Confidence 3344433 346899999994
No 49
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.65 E-value=7.9e-08 Score=82.02 Aligned_cols=70 Identities=16% Similarity=0.196 Sum_probs=49.2
Q ss_pred CceeEecCCCccH------HHHHHHHHhcCCCCCceEEEeccccCC-------CCCCHHHHHHHHHhhhhCCCCeEEEcc
Q 026605 54 SPVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDR-------GYYSVETVTLLVALKVRYPQRITILRG 120 (236)
Q Consensus 54 ~~i~vigDIHG~~------~~L~~ll~~~~~~~~~~~v~LGD~vdr-------G~~s~e~l~~l~~lk~~~p~~v~~lrG 120 (236)
|++++|||+|... .++.+.|+.. ..+.+.++++||++|. .+...+++..+.+++.. +-.+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEeC
Confidence 7899999999542 2344444332 2457889999999985 22345677777777543 236999999
Q ss_pred Ccccc
Q 026605 121 NHESR 125 (236)
Q Consensus 121 NHE~~ 125 (236)
|||..
T Consensus 79 NHD~~ 83 (241)
T PRK05340 79 NRDFL 83 (241)
T ss_pred CCchh
Confidence 99975
No 50
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=98.64 E-value=1.1e-07 Score=80.44 Aligned_cols=67 Identities=27% Similarity=0.330 Sum_probs=48.2
Q ss_pred ceeEecCCCcc------------HHHHHHHHHhcCCC--CCceEEEeccccCCCCCC--HHHHHHHHHhhhhCCCCeEEE
Q 026605 55 PVTICGDIHGQ------------FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITIL 118 (236)
Q Consensus 55 ~i~vigDIHG~------------~~~L~~ll~~~~~~--~~~~~v~LGD~vdrG~~s--~e~l~~l~~lk~~~p~~v~~l 118 (236)
|++++||+|=. ...|+++++.+... +.+-+|++||+++.|... ..+.+.+..+ +..++++
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~v 76 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPESYERLRELLAAL----PIPVYLL 76 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHHHHHHHHHHHhhc----CCCEEEe
Confidence 68999999933 45688888877654 778899999999986532 1233333333 3469999
Q ss_pred ccCcccc
Q 026605 119 RGNHESR 125 (236)
Q Consensus 119 rGNHE~~ 125 (236)
+||||..
T Consensus 77 ~GNHD~~ 83 (240)
T cd07402 77 PGNHDDR 83 (240)
T ss_pred CCCCCCH
Confidence 9999974
No 51
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.63 E-value=2.2e-07 Score=74.98 Aligned_cols=66 Identities=26% Similarity=0.372 Sum_probs=44.9
Q ss_pred eeEecCCCccHHH---------------HHHHHHhcCC--CCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEE
Q 026605 56 VTICGDIHGQFHD---------------LAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITIL 118 (236)
Q Consensus 56 i~vigDIHG~~~~---------------L~~ll~~~~~--~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~l 118 (236)
.+++||+|=.... ..++++.+.. .+.+.++++||+++++..+.. ++++.++ +..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEE
Confidence 3789999844332 2334444332 356899999999999986544 5555544 3469999
Q ss_pred ccCccccc
Q 026605 119 RGNHESRQ 126 (236)
Q Consensus 119 rGNHE~~~ 126 (236)
+||||...
T Consensus 76 ~GNHD~~~ 83 (168)
T cd07390 76 KGNHDSSL 83 (168)
T ss_pred eCCCCchh
Confidence 99999864
No 52
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=98.60 E-value=4.5e-07 Score=75.51 Aligned_cols=74 Identities=26% Similarity=0.325 Sum_probs=52.4
Q ss_pred ceeEecCCC-cc--------------HHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhC---CCCeE
Q 026605 55 PVTICGDIH-GQ--------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY---PQRIT 116 (236)
Q Consensus 55 ~i~vigDIH-G~--------------~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~---p~~v~ 116 (236)
|++.+||+| |. +..|.++++.+...+.+.+++.||+++....+.+.+..+.+..... ...++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 688999999 32 2357788887777778899999999998775554433333322221 33699
Q ss_pred EEccCccccccc
Q 026605 117 ILRGNHESRQIT 128 (236)
Q Consensus 117 ~lrGNHE~~~~~ 128 (236)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999987643
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.56 E-value=3.3e-07 Score=75.78 Aligned_cols=70 Identities=13% Similarity=0.072 Sum_probs=45.2
Q ss_pred CceeEecCCCccH------------HHHHHHHHhcCCCCCceEEEeccccCCCCCC---HHHHHHHHHhhhhCCCCeEEE
Q 026605 54 SPVTICGDIHGQF------------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYS---VETVTLLVALKVRYPQRITIL 118 (236)
Q Consensus 54 ~~i~vigDIHG~~------------~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s---~e~l~~l~~lk~~~p~~v~~l 118 (236)
.++++++|+|--. ..+..+.+.+.....+.+|++||+++.+... .+.+..+.+......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 5799999999522 1222333334445678899999999876653 444444443323233468999
Q ss_pred ccCcc
Q 026605 119 RGNHE 123 (236)
Q Consensus 119 rGNHE 123 (236)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.50 E-value=6e-07 Score=84.56 Aligned_cols=114 Identities=18% Similarity=0.220 Sum_probs=67.2
Q ss_pred CCceeEecCCC-ccH----HHHHHHHHhcC---------CCCCceEEEeccccCC-CCCC---------------HHHHH
Q 026605 53 KSPVTICGDIH-GQF----HDLAELFQIGG---------KCPDTNYLFMGDYVDR-GYYS---------------VETVT 102 (236)
Q Consensus 53 ~~~i~vigDIH-G~~----~~L~~ll~~~~---------~~~~~~~v~LGD~vdr-G~~s---------------~e~l~ 102 (236)
+.+++++||+| |.. ..++++++.+. ....+.+|++||++|. |+++ .++..
T Consensus 243 ~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~ 322 (504)
T PRK04036 243 KVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAE 322 (504)
T ss_pred ccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHH
Confidence 46899999999 652 34566666554 3345789999999984 3322 14556
Q ss_pred HHHHhhhhCCCCeEEEccCccccccccccC-cHHHHHHHhCCchhHHHHHHHhccCcceEE-ECcEEEEEeCCC
Q 026605 103 LLVALKVRYPQRITILRGNHESRQITQVYG-FYDECLRKYGNANIWKIFTDLFDYFPLTAL-SQKYSVCMVGCP 174 (236)
Q Consensus 103 ~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~-f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~-~~~~~~~~hg~~ 174 (236)
++.++.... .+++++||||......... +.......+. +.-..++.+ |.... .+..++..||.+
T Consensus 323 ~L~~L~~~i--~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~-----~~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 323 YLKQIPEDI--KIIISPGNHDAVRQAEPQPAFPEEIRSLFP-----EHNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHHhhhcCC--eEEEecCCCcchhhccCCCCccHHHHHhcC-----cCCeEEecC-CeEEEECCEEEEEECCCC
Confidence 666664332 5999999999864322211 2111111111 112345555 65443 355788889876
No 55
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=98.43 E-value=4.2e-07 Score=77.41 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=51.1
Q ss_pred ceeEecCCCccH------HHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 55 PVTICGDIHGQF------HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 55 ~i~vigDIHG~~------~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
|++++||+|.++ ..|.++++.+...+.|.+|+.||++++.+.+.+.++.+.++ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 589999999653 34677888777677889999999999876555555555443 233699999999964
No 56
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.38 E-value=9.7e-07 Score=74.07 Aligned_cols=69 Identities=17% Similarity=0.151 Sum_probs=45.5
Q ss_pred ceeEecCCCc----cHH----HHHHHHHhcCCCCCceEEEeccccCCCCCCH---HHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 55 PVTICGDIHG----QFH----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 55 ~i~vigDIHG----~~~----~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~---e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
+++++||+|- ... .+..+++.+.....+.++++||+++.+..+. +..+.+..+.. .+-.+++++||||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNHD 80 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNHD 80 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCCc
Confidence 6899999994 223 3344555555566788999999999988543 23333444421 1224899999999
Q ss_pred c
Q 026605 124 S 124 (236)
Q Consensus 124 ~ 124 (236)
.
T Consensus 81 ~ 81 (214)
T cd07399 81 L 81 (214)
T ss_pred c
Confidence 4
No 57
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.36 E-value=1.1e-06 Score=76.09 Aligned_cols=73 Identities=19% Similarity=0.220 Sum_probs=52.7
Q ss_pred ceeEecCCC--c-----------cHHHHHHHHHhcCCCCCceEEEeccccCCCCC-CHHHHHHHHHhhhhCCCCeEEEcc
Q 026605 55 PVTICGDIH--G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRG 120 (236)
Q Consensus 55 ~i~vigDIH--G-----------~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~-s~e~l~~l~~lk~~~p~~v~~lrG 120 (236)
|++++||+| . +...|+++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++++.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 689999999 2 24678888888876668889999999988863 334444444433333346999999
Q ss_pred Ccccccc
Q 026605 121 NHESRQI 127 (236)
Q Consensus 121 NHE~~~~ 127 (236)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 58
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=98.35 E-value=4.5e-06 Score=67.55 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=37.7
Q ss_pred HHHHHHHHhcCCCCCceEEEeccccCCCCCCH-HHHHHH-HHhhhhCCCCeEEEccCccccc
Q 026605 67 HDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV-ETVTLL-VALKVRYPQRITILRGNHESRQ 126 (236)
Q Consensus 67 ~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~-e~l~~l-~~lk~~~p~~v~~lrGNHE~~~ 126 (236)
+.+.++.+.+...+.+.+|++||+++....+. +....+ .......+..+++++||||...
T Consensus 28 ~~~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 28 DTLERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 44566666666677899999999998654332 222221 1111123347999999999863
No 59
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.32 E-value=1.4e-06 Score=78.26 Aligned_cols=73 Identities=19% Similarity=0.295 Sum_probs=53.2
Q ss_pred CceeEecCCC-c-----------cHHHHHHHHHhcCCCCCceEEEeccccCCC-CCCHHHHHHHHH--hh--hhCCCCeE
Q 026605 54 SPVTICGDIH-G-----------QFHDLAELFQIGGKCPDTNYLFMGDYVDRG-YYSVETVTLLVA--LK--VRYPQRIT 116 (236)
Q Consensus 54 ~~i~vigDIH-G-----------~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG-~~s~e~l~~l~~--lk--~~~p~~v~ 116 (236)
||++.+||+| | ....|.++++.+...+.+.+++.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 7899999999 4 235677777777777889999999999985 455555555543 11 12234699
Q ss_pred EEccCccccc
Q 026605 117 ILRGNHESRQ 126 (236)
Q Consensus 117 ~lrGNHE~~~ 126 (236)
+|.||||...
T Consensus 81 ~I~GNHD~~~ 90 (340)
T PHA02546 81 VLVGNHDMYY 90 (340)
T ss_pred EEccCCCccc
Confidence 9999999753
No 60
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.30 E-value=3.7e-06 Score=72.45 Aligned_cols=71 Identities=21% Similarity=0.081 Sum_probs=44.6
Q ss_pred eeEecCCCccH------HHH-HHHHHhcCCCCCceEEEeccccCCCCCC-------HHHH-HHHHHhh---hhCCCCeEE
Q 026605 56 VTICGDIHGQF------HDL-AELFQIGGKCPDTNYLFMGDYVDRGYYS-------VETV-TLLVALK---VRYPQRITI 117 (236)
Q Consensus 56 i~vigDIHG~~------~~L-~~ll~~~~~~~~~~~v~LGD~vdrG~~s-------~e~l-~~l~~lk---~~~p~~v~~ 117 (236)
++.++|+|-.. ... ..+++.+.....+.+|++||++|+.... .+.. .++..++ ...+..++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 57899999522 222 4455666666778899999999976521 1111 3333332 222457899
Q ss_pred EccCccccc
Q 026605 118 LRGNHESRQ 126 (236)
Q Consensus 118 lrGNHE~~~ 126 (236)
++||||...
T Consensus 82 v~GNHD~~~ 90 (256)
T cd07401 82 IRGNHDLFN 90 (256)
T ss_pred eCCCCCcCC
Confidence 999999853
No 61
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.29 E-value=1.8e-06 Score=74.41 Aligned_cols=72 Identities=24% Similarity=0.309 Sum_probs=53.0
Q ss_pred CceeEecCCC-cc-----------HHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHH----HHHHHhhhhCCCCeEE
Q 026605 54 SPVTICGDIH-GQ-----------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYPQRITI 117 (236)
Q Consensus 54 ~~i~vigDIH-G~-----------~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l----~~l~~lk~~~p~~v~~ 117 (236)
||++.+||+| |. ...|.++++.+.....|.+++.||++|+...+.+.. .++..++...|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 7899999999 32 346677777776677899999999999886665443 3444454333346999
Q ss_pred EccCcccc
Q 026605 118 LRGNHESR 125 (236)
Q Consensus 118 lrGNHE~~ 125 (236)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999985
No 62
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=98.20 E-value=4.8e-06 Score=72.38 Aligned_cols=72 Identities=13% Similarity=0.081 Sum_probs=50.9
Q ss_pred cCCceeEecCCC-c-----------cHHHHHHHHHhcCC--CCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEE
Q 026605 52 VKSPVTICGDIH-G-----------QFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 117 (236)
Q Consensus 52 ~~~~i~vigDIH-G-----------~~~~L~~ll~~~~~--~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~ 117 (236)
-.++++.|+|+| . ....|+++++.+.. ...+-+|+.||+++.|. .+-+..+.+.-...+..+++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~ 90 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVW 90 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEE
Confidence 457999999999 1 24678888887653 34688999999999874 33333333332333456999
Q ss_pred EccCcccc
Q 026605 118 LRGNHESR 125 (236)
Q Consensus 118 lrGNHE~~ 125 (236)
+.||||..
T Consensus 91 v~GNHD~~ 98 (275)
T PRK11148 91 LPGNHDFQ 98 (275)
T ss_pred eCCCCCCh
Confidence 99999973
No 63
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.12 E-value=7.1e-06 Score=75.38 Aligned_cols=71 Identities=25% Similarity=0.305 Sum_probs=49.4
Q ss_pred CceeEecCCC-cc-H------H----HHHHHHHhcCCCCCceEEEeccccCCCCCCHHHH----HHHHHhhhhCCCCeEE
Q 026605 54 SPVTICGDIH-GQ-F------H----DLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV----TLLVALKVRYPQRITI 117 (236)
Q Consensus 54 ~~i~vigDIH-G~-~------~----~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l----~~l~~lk~~~p~~v~~ 117 (236)
||++.+||+| |. + . .|..+++.+.....|.+++.||++|++..+.+.. .++..++.. +-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEEE
Confidence 6899999999 42 1 1 1445666666678899999999999986554432 334444422 236999
Q ss_pred EccCcccc
Q 026605 118 LRGNHESR 125 (236)
Q Consensus 118 lrGNHE~~ 125 (236)
|.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999974
No 64
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.11 E-value=4.2e-06 Score=70.99 Aligned_cols=69 Identities=10% Similarity=0.057 Sum_probs=44.0
Q ss_pred eeEecCCCccH---HHHHHHHHhcCC--CCCceEEEeccccCCC-----CC--CHHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 56 VTICGDIHGQF---HDLAELFQIGGK--CPDTNYLFMGDYVDRG-----YY--SVETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 56 i~vigDIHG~~---~~L~~ll~~~~~--~~~~~~v~LGD~vdrG-----~~--s~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
++++||+|... ...+++++.+.. ...+.++++||++|.. +. ..++.+.+..++.. +..++++.||||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNHD 79 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNRD 79 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCCc
Confidence 36899999542 222333333322 2578899999999852 11 13456666666533 336999999999
Q ss_pred cc
Q 026605 124 SR 125 (236)
Q Consensus 124 ~~ 125 (236)
..
T Consensus 80 ~~ 81 (231)
T TIGR01854 80 FL 81 (231)
T ss_pred hh
Confidence 75
No 65
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.09 E-value=1.1e-05 Score=73.96 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=58.8
Q ss_pred CCceeEecCCCcc------------HHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhh----------
Q 026605 53 KSPVTICGDIHGQ------------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVR---------- 110 (236)
Q Consensus 53 ~~~i~vigDIHG~------------~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~---------- 110 (236)
.|||+.++|+|-- +.+|.++++.+.....|-+++.||++|++.-|.+++..+++.-.+
T Consensus 3 ~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~ 82 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCEL 82 (405)
T ss_pred ceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccch
Confidence 5899999999932 568899999998888999999999999999888877554443221
Q ss_pred --------------------------CCCCeEEEccCccccc
Q 026605 111 --------------------------YPQRITILRGNHESRQ 126 (236)
Q Consensus 111 --------------------------~p~~v~~lrGNHE~~~ 126 (236)
..-.|++|-||||...
T Consensus 83 ~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 83 EFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hhccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1236999999999975
No 66
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=98.05 E-value=1.1e-05 Score=68.28 Aligned_cols=69 Identities=16% Similarity=0.176 Sum_probs=47.4
Q ss_pred CceeEecCCC-ccHH----------------HHHHHHHhcCCCCCceEEEeccccCCCCC---CHHHHHHHHHhhhhCCC
Q 026605 54 SPVTICGDIH-GQFH----------------DLAELFQIGGKCPDTNYLFMGDYVDRGYY---SVETVTLLVALKVRYPQ 113 (236)
Q Consensus 54 ~~i~vigDIH-G~~~----------------~L~~ll~~~~~~~~~~~v~LGD~vdrG~~---s~e~l~~l~~lk~~~p~ 113 (236)
.+..+|+|+| |--. .|+++.+.+...+.+.++++||+.+.... ..++.+++..+. .
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 5789999999 5322 34445555555678899999999975544 333444555442 2
Q ss_pred CeEEEccCccccc
Q 026605 114 RITILRGNHESRQ 126 (236)
Q Consensus 114 ~v~~lrGNHE~~~ 126 (236)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999763
No 67
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.94 E-value=1.5e-05 Score=63.60 Aligned_cols=50 Identities=20% Similarity=0.236 Sum_probs=31.7
Q ss_pred CCCCCceEEEeccccCCCCCCH-HHH-HHHHHhhhh---C-CCCeEEEccCccccc
Q 026605 77 GKCPDTNYLFMGDYVDRGYYSV-ETV-TLLVALKVR---Y-PQRITILRGNHESRQ 126 (236)
Q Consensus 77 ~~~~~~~~v~LGD~vdrG~~s~-e~l-~~l~~lk~~---~-p~~v~~lrGNHE~~~ 126 (236)
...+.+.++++||+++.+..+. +.. ..+..++.. . +..++++.||||...
T Consensus 35 ~~~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 35 WLLQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred HhcCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 3456789999999999876432 222 222222221 1 236999999999854
No 68
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.92 E-value=2e-05 Score=68.27 Aligned_cols=70 Identities=16% Similarity=0.251 Sum_probs=45.4
Q ss_pred eeEecCCCccHHHHHHHHHhcC---CCCCceEEEeccccCCCCCC-HHHH----------HHHHHh--hhhCCCCeEEEc
Q 026605 56 VTICGDIHGQFHDLAELFQIGG---KCPDTNYLFMGDYVDRGYYS-VETV----------TLLVAL--KVRYPQRITILR 119 (236)
Q Consensus 56 i~vigDIHG~~~~L~~ll~~~~---~~~~~~~v~LGD~vdrG~~s-~e~l----------~~l~~l--k~~~p~~v~~lr 119 (236)
|+|+||+||+++.+.+.++... ..+.|-+|++||+-..+..+ .+.+ ++..-+ ....|-.+++|.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 6899999999988876554432 35678899999996554433 2222 111111 122455579999
Q ss_pred cCcccc
Q 026605 120 GNHESR 125 (236)
Q Consensus 120 GNHE~~ 125 (236)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999974
No 69
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.91 E-value=4.3e-05 Score=65.82 Aligned_cols=74 Identities=20% Similarity=0.267 Sum_probs=54.9
Q ss_pred CceeEecCCCcc------HHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhh--hCCCCeEEEccCcccc
Q 026605 54 SPVTICGDIHGQ------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKV--RYPQRITILRGNHESR 125 (236)
Q Consensus 54 ~~i~vigDIHG~------~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~--~~p~~v~~lrGNHE~~ 125 (236)
++++.|+|+|-- .+.+.++++.+...+.|-+|+.||+.+.|. .+-.+.+.++-. ..|..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 579999999965 356778888888777799999999999953 333333333323 5566799999999997
Q ss_pred cccc
Q 026605 126 QITQ 129 (236)
Q Consensus 126 ~~~~ 129 (236)
..+.
T Consensus 79 ~~~~ 82 (301)
T COG1409 79 VVNG 82 (301)
T ss_pred chHH
Confidence 6643
No 70
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=97.88 E-value=0.00012 Score=60.42 Aligned_cols=67 Identities=15% Similarity=0.174 Sum_probs=45.0
Q ss_pred cCCCccHHHHHHHHHhcCC-CCCceEEEeccccCCCCCCHH-HHHHHHHhhhhC---------------------CCCeE
Q 026605 60 GDIHGQFHDLAELFQIGGK-CPDTNYLFMGDYVDRGYYSVE-TVTLLVALKVRY---------------------PQRIT 116 (236)
Q Consensus 60 gDIHG~~~~L~~ll~~~~~-~~~~~~v~LGD~vdrG~~s~e-~l~~l~~lk~~~---------------------p~~v~ 116 (236)
=|++|+-.=|.+.++.+.. -..+.++||||++|.|.-+-+ =-+.....+..+ .-.++
T Consensus 23 ld~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i 102 (193)
T cd08164 23 LDLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLI 102 (193)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEE
Confidence 3667887777888776543 456789999999999864433 224444444332 13468
Q ss_pred EEccCccccc
Q 026605 117 ILRGNHESRQ 126 (236)
Q Consensus 117 ~lrGNHE~~~ 126 (236)
.|.||||.-.
T Consensus 103 ~V~GNHDIG~ 112 (193)
T cd08164 103 NIAGNHDVGY 112 (193)
T ss_pred EECCcccCCC
Confidence 8999999953
No 71
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.85 E-value=0.0001 Score=59.83 Aligned_cols=52 Identities=21% Similarity=0.205 Sum_probs=33.9
Q ss_pred hcCCCCCceEEEeccccCCCCCCH--H---HHHHHHHhhhh-----CCCCeEEEccCccccc
Q 026605 75 IGGKCPDTNYLFMGDYVDRGYYSV--E---TVTLLVALKVR-----YPQRITILRGNHESRQ 126 (236)
Q Consensus 75 ~~~~~~~~~~v~LGD~vdrG~~s~--e---~l~~l~~lk~~-----~p~~v~~lrGNHE~~~ 126 (236)
.+...+.+.++++||++|.+.... + .+..+.++... .+..+++|.||||...
T Consensus 40 ~i~~~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 40 ALQRLKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred HHHhcCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 344566789999999999887532 2 33333332111 1336999999999974
No 72
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.84 E-value=3.5e-05 Score=65.39 Aligned_cols=65 Identities=22% Similarity=0.286 Sum_probs=41.3
Q ss_pred eeEecCCCcc---------H-----HHHHHHHHhcCC--CCCceEEEeccccCCCCCC--HHHHHHHHHhhhhCCCCeEE
Q 026605 56 VTICGDIHGQ---------F-----HDLAELFQIGGK--CPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYPQRITI 117 (236)
Q Consensus 56 i~vigDIHG~---------~-----~~L~~ll~~~~~--~~~~~~v~LGD~vdrG~~s--~e~l~~l~~lk~~~p~~v~~ 117 (236)
+++++|+|-. + +-++++.+.+.. ++.|-+++.||++++++.. .+.+.++.++ |..+++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~~ 76 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKVL 76 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCChHHHHHHHHHHHhC----CCCeEE
Confidence 5789999955 2 223333333222 3788899999999876532 2334444443 335899
Q ss_pred EccCccc
Q 026605 118 LRGNHES 124 (236)
Q Consensus 118 lrGNHE~ 124 (236)
|.||||.
T Consensus 77 V~GNHD~ 83 (232)
T cd07393 77 LKGNHDY 83 (232)
T ss_pred EeCCccc
Confidence 9999997
No 73
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.84 E-value=4.4e-05 Score=69.59 Aligned_cols=73 Identities=25% Similarity=0.329 Sum_probs=56.0
Q ss_pred CceeEecCCC-c------------cHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCC---CCeEE
Q 026605 54 SPVTICGDIH-G------------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP---QRITI 117 (236)
Q Consensus 54 ~~i~vigDIH-G------------~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p---~~v~~ 117 (236)
||+.-++|.| | .+.+|..+++.+.....|-+|+-||++|.+.-|.+++.++.+.-.+.. -.+++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 6899999999 4 246777778888888889999999999998888776665544332221 25999
Q ss_pred EccCccccc
Q 026605 118 LRGNHESRQ 126 (236)
Q Consensus 118 lrGNHE~~~ 126 (236)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999965
No 74
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.78 E-value=7.3e-05 Score=59.45 Aligned_cols=66 Identities=24% Similarity=0.365 Sum_probs=48.6
Q ss_pred eEecCCCccHHHHHHHHHhcC--CCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 57 TICGDIHGQFHDLAELFQIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 57 ~vigDIHG~~~~L~~ll~~~~--~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
.|+||+||+++.+-+-++.+. ..+.|-++|+||+..-.....+ +.-...-....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC
Confidence 489999999998877766533 3466889999999976666533 33333344456778999999998
No 75
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.73 E-value=9e-05 Score=62.13 Aligned_cols=74 Identities=22% Similarity=0.267 Sum_probs=56.6
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCCCCCceEEEecccc--CCCCCCHHHHH-HHHHhhhhCCCCeEEEccCcccccc
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYV--DRGYYSVETVT-LLVALKVRYPQRITILRGNHESRQI 127 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~v--drG~~s~e~l~-~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (236)
.||+..++|+||..+.+.+++..+.....|-+++.||+. +.|+.-...-+ .+..++. .-..++.++||.|...+
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~~~v 79 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDPPEV 79 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCChHHH
Confidence 589999999999999999999999888889999999999 77764322211 1333332 22369999999998755
No 76
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.72 E-value=5.6e-05 Score=62.79 Aligned_cols=69 Identities=22% Similarity=0.213 Sum_probs=39.1
Q ss_pred eEecCCC---ccHH---HHHHHHHhcCCCCCceEEEeccccCCC-----CC--C-HHHHHHHHHhhhhCCCCeEEEccCc
Q 026605 57 TICGDIH---GQFH---DLAELFQIGGKCPDTNYLFMGDYVDRG-----YY--S-VETVTLLVALKVRYPQRITILRGNH 122 (236)
Q Consensus 57 ~vigDIH---G~~~---~L~~ll~~~~~~~~~~~v~LGD~vdrG-----~~--s-~e~l~~l~~lk~~~p~~v~~lrGNH 122 (236)
++|||+| +... .+..+++.....+.+.+|++||++|.- .. . .+.+..+.... .....++++.|||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GNH 79 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGNH 79 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCCc
Confidence 4899999 2222 222333222124678899999999741 11 1 12222333322 2334799999999
Q ss_pred cccc
Q 026605 123 ESRQ 126 (236)
Q Consensus 123 E~~~ 126 (236)
|...
T Consensus 80 D~~~ 83 (217)
T cd07398 80 DFLL 83 (217)
T ss_pred hHHH
Confidence 9864
No 77
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.68 E-value=0.00014 Score=62.53 Aligned_cols=71 Identities=15% Similarity=0.016 Sum_probs=45.9
Q ss_pred ceeEecCCCccH----------------HHHHHHHHhcCCC--CCceEEEeccccCCCCCCH---HHHHHHHHhhhhC--
Q 026605 55 PVTICGDIHGQF----------------HDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRY-- 111 (236)
Q Consensus 55 ~i~vigDIHG~~----------------~~L~~ll~~~~~~--~~~~~v~LGD~vdrG~~s~---e~l~~l~~lk~~~-- 111 (236)
+++++||+|-.. ..|+++++.+... ..+-++++||+++.|.... +....+.+.-...
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 678899998553 2356777776543 6678999999999887542 1122222211111
Q ss_pred CCCeEEEccCcccc
Q 026605 112 PQRITILRGNHESR 125 (236)
Q Consensus 112 p~~v~~lrGNHE~~ 125 (236)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 23599999999974
No 78
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.68 E-value=6.4e-05 Score=64.13 Aligned_cols=68 Identities=19% Similarity=0.254 Sum_probs=42.1
Q ss_pred eEecCCC--ccH---HHHHHHHHhcCCC-----CCceEEEeccccCCCCC------------C----HHHHHHHHHhhhh
Q 026605 57 TICGDIH--GQF---HDLAELFQIGGKC-----PDTNYLFMGDYVDRGYY------------S----VETVTLLVALKVR 110 (236)
Q Consensus 57 ~vigDIH--G~~---~~L~~ll~~~~~~-----~~~~~v~LGD~vdrG~~------------s----~e~l~~l~~lk~~ 110 (236)
++|||+| +.. ..++.+++.+... ..+.+|++||++|.... . .++..++.++...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 6899999 432 3334555544332 34789999999997310 0 1244444445322
Q ss_pred CCCCeEEEccCccccc
Q 026605 111 YPQRITILRGNHESRQ 126 (236)
Q Consensus 111 ~p~~v~~lrGNHE~~~ 126 (236)
-.++++.||||...
T Consensus 82 --~~v~~ipGNHD~~~ 95 (243)
T cd07386 82 --IKIIIIPGNHDAVR 95 (243)
T ss_pred --CeEEEeCCCCCccc
Confidence 35999999999853
No 79
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=97.62 E-value=5.8e-05 Score=65.76 Aligned_cols=69 Identities=19% Similarity=0.176 Sum_probs=43.6
Q ss_pred CceeEecCCCc----cHHHHHHHHHhcCCCCCceEEEeccccCCCCCC-----HHHHHHHHHhhhhCCCCeEEEccCccc
Q 026605 54 SPVTICGDIHG----QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 54 ~~i~vigDIHG----~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s-----~e~l~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
-+++|+||.|. +...+.++.+. ....+-++++||+++.+... ..-+..+..+.... .++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~--P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYV--PYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcC--CcEEcCccccc
Confidence 47999999995 23444444433 35667899999999544332 22333333333334 48999999998
Q ss_pred cc
Q 026605 125 RQ 126 (236)
Q Consensus 125 ~~ 126 (236)
..
T Consensus 81 ~~ 82 (294)
T cd00839 81 DY 82 (294)
T ss_pred cc
Confidence 54
No 80
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=97.61 E-value=0.0005 Score=56.92 Aligned_cols=107 Identities=13% Similarity=0.111 Sum_probs=61.8
Q ss_pred CCCCceEEEeccccCCCCCCH--HHHHHHHHhhhhCC----CCeEEEccCccccccccccCcHHHHHHHhCCchhHHHHH
Q 026605 78 KCPDTNYLFMGDYVDRGYYSV--ETVTLLVALKVRYP----QRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFT 151 (236)
Q Consensus 78 ~~~~~~~v~LGD~vdrG~~s~--e~l~~l~~lk~~~p----~~v~~lrGNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~ 151 (236)
.-..+-++|+||++|.|+.+. +..+.+..++..++ ..+++|.||||--.... ....+..++| .
T Consensus 40 ~l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~--~~~~~~v~RF---------~ 108 (195)
T cd08166 40 FVQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE--DPIESKIRRF---------E 108 (195)
T ss_pred ccCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC--CcCHHHHHHH---------H
Confidence 346788999999999999643 36666666654422 35789999999752211 1113333333 4
Q ss_pred HHhccCcceEEECcEEEEEeCCCccccccccccceeeeecccccCCcEEEecCceeEeEecC
Q 026605 152 DLFDYFPLTALSQKYSVCMVGCPLQLKLLIISGTLIVFKRFLMKGPCVICYGLTQMIDVVGV 213 (236)
Q Consensus 152 ~~~~~LP~~~~~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~~~v~g~ 213 (236)
++| ++..|=+....... ....-......++++.||.++--.|-.
T Consensus 109 ~~F------------i~lsH~P~~~~~~~------~~~~~~~~~~p~~Ifs~H~H~s~~~~~ 152 (195)
T cd08166 109 KYF------------IMLSHVPLLAEGGQ------ALKHVVTDLDPDLIFSAHRHKSSIFMY 152 (195)
T ss_pred Hhh------------eeeecccccccccH------HHHHHHHhcCceEEEEcCccceeeEEe
Confidence 444 55555544332111 111112333567788888888775553
No 81
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=97.59 E-value=0.00016 Score=63.45 Aligned_cols=74 Identities=19% Similarity=0.139 Sum_probs=54.4
Q ss_pred CCceeEecCCCccHHH--HHHHHHhcCCCCCceEEEeccccCC--CCCCHHHHHHHHHhhhhCCCCeEEEccCccccccc
Q 026605 53 KSPVTICGDIHGQFHD--LAELFQIGGKCPDTNYLFMGDYVDR--GYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 128 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~--L~~ll~~~~~~~~~~~v~LGD~vdr--G~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (236)
+-+|+-++|+|-.... ..+.+........|-+++.||++++ -+....+...+..++... .++++.||||...-.
T Consensus 44 ~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~~~~--gv~av~GNHd~~~~~ 121 (284)
T COG1408 44 GLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLKAPL--GVFAVLGNHDYGVDR 121 (284)
T ss_pred CeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhhccC--CEEEEeccccccccc
Confidence 4579999999977644 3444444444444889999999995 455566888888886554 699999999986543
No 82
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=97.51 E-value=7.5e-05 Score=62.76 Aligned_cols=72 Identities=17% Similarity=0.236 Sum_probs=45.8
Q ss_pred CceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHH--------------------------HHHHHh
Q 026605 54 SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETV--------------------------TLLVAL 107 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l--------------------------~~l~~l 107 (236)
.++.+++|.||.++.|.++.+.+.....|-++|+||++-....+.|=. .+++.|
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 479999999999999999999988888999999999986554433322 344444
Q ss_pred hhhCCCCeEEEccCccccc
Q 026605 108 KVRYPQRITILRGNHESRQ 126 (236)
Q Consensus 108 k~~~p~~v~~lrGNHE~~~ 126 (236)
.. .+-.+++|+||||...
T Consensus 86 ~~-~~~p~~~vPG~~Dap~ 103 (255)
T PF14582_consen 86 GE-LGVPVFVVPGNMDAPE 103 (255)
T ss_dssp HC-C-SEEEEE--TTS-SH
T ss_pred Hh-cCCcEEEecCCCCchH
Confidence 32 2336999999999954
No 83
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=97.45 E-value=0.00024 Score=60.64 Aligned_cols=66 Identities=29% Similarity=0.328 Sum_probs=47.3
Q ss_pred ceeEecCCCccH---------HHHHHHHHhcCCCCCc-eEEEeccccCCCCCCH-----HHHHHHHHhhhhCCCCeEEEc
Q 026605 55 PVTICGDIHGQF---------HDLAELFQIGGKCPDT-NYLFMGDYVDRGYYSV-----ETVTLLVALKVRYPQRITILR 119 (236)
Q Consensus 55 ~i~vigDIHG~~---------~~L~~ll~~~~~~~~~-~~v~LGD~vdrG~~s~-----e~l~~l~~lk~~~p~~v~~lr 119 (236)
+++.++|+||.+ ..+.++++.......+ -++..||+++..+.+. .+++.+..+. -.++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g-----~d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG-----YDAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC-----CCEEee
Confidence 688999999776 6777888887665555 4567999999877643 5666665552 234556
Q ss_pred cCcccc
Q 026605 120 GNHESR 125 (236)
Q Consensus 120 GNHE~~ 125 (236)
||||.-
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999974
No 84
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=97.44 E-value=0.00065 Score=53.91 Aligned_cols=102 Identities=14% Similarity=0.053 Sum_probs=61.6
Q ss_pred ceeEecCCC------------ccHHHHHHHH-HhcC--CCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEc
Q 026605 55 PVTICGDIH------------GQFHDLAELF-QIGG--KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILR 119 (236)
Q Consensus 55 ~i~vigDIH------------G~~~~L~~ll-~~~~--~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lr 119 (236)
.++++||.| .|.+...+++ .-.. -.+.|.+++|||+.-.-....+..+++..| |++.++|+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILERL----NGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHHHc----CCcEEEee
Confidence 478999998 3444554433 2222 256788999999986544455555566555 77899999
Q ss_pred cCccccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEEECcEEEEEeCCCccc
Q 026605 120 GNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALSQKYSVCMVGCPLQL 177 (236)
Q Consensus 120 GNHE~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~~~~~~~~~hg~~~~~ 177 (236)
||||-.--....+| ....++|+. .-..+..++..|-+....
T Consensus 81 GNhDk~~~~~~~~~--------------~~svq~f~~---ie~dg~~~~LsHyP~~~~ 121 (186)
T COG4186 81 GNHDKCHPMYRHAY--------------FDSVQAFQR---IEWDGEDVYLSHYPRPGQ 121 (186)
T ss_pred CCCCCCcccccchh--------------hHHHHHHHh---eeECCeEEEEEeCCCCCC
Confidence 99998643322222 112223332 234566777777765443
No 85
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.14 E-value=0.0019 Score=54.70 Aligned_cols=99 Identities=15% Similarity=0.184 Sum_probs=57.9
Q ss_pred eEecCCCcc--H----HHHHHHHHhcCCCCCceEEEeccccC----CCCCC---HHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 57 TICGDIHGQ--F----HDLAELFQIGGKCPDTNYLFMGDYVD----RGYYS---VETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 57 ~vigDIHG~--~----~~L~~ll~~~~~~~~~~~v~LGD~vd----rG~~s---~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
+.|||+|=. - +.|.+.|+... +..+.++++||++| +.+.+ .++...|..+.. ...+++++.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~a~-~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRLAR-KGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHHHh-cCCeEEEecCchH
Confidence 368999933 2 33444454433 35688999999984 33222 345666655532 3447999999999
Q ss_pred ccccccccCcHHHHHHHhCCchhHHHHHHHhccCcceEE---ECcEEEEEeCCC
Q 026605 124 SRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTAL---SQKYSVCMVGCP 174 (236)
Q Consensus 124 ~~~~~~~~~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~---~~~~~~~~hg~~ 174 (236)
.. +... .....|. +.-+|-..+ .++++++.||-.
T Consensus 79 fl-l~~~------f~~~~g~----------~~l~~~~~~~~l~g~~~Ll~HGD~ 115 (237)
T COG2908 79 FL-LGKR------FAQEAGG----------MTLLPDPIVLDLYGKRILLAHGDT 115 (237)
T ss_pred HH-HHHH------HHhhcCc----------eEEcCcceeeeecCcEEEEEeCCc
Confidence 54 2211 1112221 234455444 588999999953
No 86
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=97.09 E-value=0.0008 Score=58.46 Aligned_cols=66 Identities=21% Similarity=0.246 Sum_probs=44.8
Q ss_pred ceeEecCCCccH----------------HHHHHHHHhcCCCCCceEEE-eccccCCCCC-----------CHHHHHHHHH
Q 026605 55 PVTICGDIHGQF----------------HDLAELFQIGGKCPDTNYLF-MGDYVDRGYY-----------SVETVTLLVA 106 (236)
Q Consensus 55 ~i~vigDIHG~~----------------~~L~~ll~~~~~~~~~~~v~-LGD~vdrG~~-----------s~e~l~~l~~ 106 (236)
+|+.++|+||++ ..+..+++..+....+.+++ .||+++..+. ...+++.+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999986 44677777776555555555 7999987652 2346666666
Q ss_pred hhhhCCCCeEEEccCcccc
Q 026605 107 LKVRYPQRITILRGNHESR 125 (236)
Q Consensus 107 lk~~~p~~v~~lrGNHE~~ 125 (236)
+. --++..||||.-
T Consensus 82 ~g-----~d~~~lGNHe~d 95 (277)
T cd07410 82 LG-----YDAGTLGNHEFN 95 (277)
T ss_pred cC-----CCEEeecccCcc
Confidence 63 235566999963
No 87
>PLN02533 probable purple acid phosphatase
Probab=96.91 E-value=0.0012 Score=61.25 Aligned_cols=70 Identities=19% Similarity=0.255 Sum_probs=44.0
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCH---HHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSV---ETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~---e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
.-+++++||+|-. ......++.+.....|-+++.||++.-+.+.. +-.+++..+....| ++.+.||||..
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~ 211 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELE 211 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCcccccc
Confidence 4579999999632 22234455555566788999999997543321 12233333333344 89999999985
No 88
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.85 E-value=0.0037 Score=53.08 Aligned_cols=72 Identities=19% Similarity=0.279 Sum_probs=46.8
Q ss_pred CCceeEecCCCccHH----------------HHHHHHH-hcCCCCCceEEEeccccCCCCC----C-HHHHHHHHHhhhh
Q 026605 53 KSPVTICGDIHGQFH----------------DLAELFQ-IGGKCPDTNYLFMGDYVDRGYY----S-VETVTLLVALKVR 110 (236)
Q Consensus 53 ~~~i~vigDIHG~~~----------------~L~~ll~-~~~~~~~~~~v~LGD~vdrG~~----s-~e~l~~l~~lk~~ 110 (236)
..+.+|++|+|=-++ .+.+.++ .+...+.+++|++||+-.-.+. . .++-.++..++.+
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 568999999994332 2333333 3445667889999999744332 2 3444444444433
Q ss_pred CCCCeEEEccCcccccc
Q 026605 111 YPQRITILRGNHESRQI 127 (236)
Q Consensus 111 ~p~~v~~lrGNHE~~~~ 127 (236)
.+.+++||||...-
T Consensus 99 ---evi~i~GNHD~~i~ 112 (235)
T COG1407 99 ---EVIIIRGNHDNGIE 112 (235)
T ss_pred ---cEEEEeccCCCccc
Confidence 59999999999753
No 89
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.73 E-value=0.011 Score=50.97 Aligned_cols=47 Identities=21% Similarity=0.337 Sum_probs=29.2
Q ss_pred CCCceEEEeccccCCCCCCHH-----HHHHHHHhhhhCC--CCeEEEccCcccc
Q 026605 79 CPDTNYLFMGDYVDRGYYSVE-----TVTLLVALKVRYP--QRITILRGNHESR 125 (236)
Q Consensus 79 ~~~~~~v~LGD~vdrG~~s~e-----~l~~l~~lk~~~p--~~v~~lrGNHE~~ 125 (236)
...|.++|+||++|.|..... -+..+.+.-...+ ..++.|.||||..
T Consensus 44 l~PD~vv~lGDL~d~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig 97 (257)
T cd08163 44 LKPDSTIFLGDLFDGGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIG 97 (257)
T ss_pred cCCCEEEEecccccCCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccC
Confidence 357889999999999875321 1222222211111 2489999999974
No 90
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=96.61 E-value=0.004 Score=50.65 Aligned_cols=45 Identities=27% Similarity=0.332 Sum_probs=35.2
Q ss_pred CCCceEEEecccc--CCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccccc
Q 026605 79 CPDTNYLFMGDYV--DRGYYSVETVTLLVALKVRYPQRITILRGNHESRQI 127 (236)
Q Consensus 79 ~~~~~~v~LGD~v--drG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~ 127 (236)
.+.|.++.-||+- -|=++..+-+.++-++ |+.-+++|||||.+.-
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw~ 88 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWWS 88 (230)
T ss_pred ChhhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCccccc
Confidence 4566677789984 5566677778888877 8899999999999754
No 91
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=96.53 E-value=0.0055 Score=52.69 Aligned_cols=66 Identities=23% Similarity=0.262 Sum_probs=44.0
Q ss_pred ceeEecCCCcc----------HHHHHHHHHhcCCCCCceEEEeccccCCCCCC-----HHHHHHHHHhhhhCCCCeEEEc
Q 026605 55 PVTICGDIHGQ----------FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITILR 119 (236)
Q Consensus 55 ~i~vigDIHG~----------~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s-----~e~l~~l~~lk~~~p~~v~~lr 119 (236)
+++-++|+||+ +..+..+++..+..+..-++..||.++..+.+ ..+++.+..+.. .+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g~----d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVGY----DA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcCC----cE-Ecc
Confidence 57889999997 44567777776544455566699999876532 345555555421 34 556
Q ss_pred cCcccc
Q 026605 120 GNHESR 125 (236)
Q Consensus 120 GNHE~~ 125 (236)
||||.-
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999963
No 92
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=96.43 E-value=0.0078 Score=51.92 Aligned_cols=69 Identities=22% Similarity=0.238 Sum_probs=40.7
Q ss_pred ceeEecCCCcc--H--HHHHHHH-HhcCCCCCceEEEecccc-CCCCCCH------HHHHHHHH-hhhhCCCCeEEEccC
Q 026605 55 PVTICGDIHGQ--F--HDLAELF-QIGGKCPDTNYLFMGDYV-DRGYYSV------ETVTLLVA-LKVRYPQRITILRGN 121 (236)
Q Consensus 55 ~i~vigDIHG~--~--~~L~~ll-~~~~~~~~~~~v~LGD~v-drG~~s~------e~l~~l~~-lk~~~p~~v~~lrGN 121 (236)
+++++||.=.. . .++.+.+ +.+.....+-+|++||++ +-|..+. +.+..+.. +. ....++.+.||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~--~~~P~~~v~GN 79 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPS--LQVPWYLVLGN 79 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchh--hcCCeEEecCC
Confidence 68999996542 1 3343333 334445667899999997 5554221 22222222 21 22359999999
Q ss_pred cccc
Q 026605 122 HESR 125 (236)
Q Consensus 122 HE~~ 125 (236)
||..
T Consensus 80 HD~~ 83 (277)
T cd07378 80 HDYS 83 (277)
T ss_pred cccC
Confidence 9985
No 93
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=96.41 E-value=0.0038 Score=54.69 Aligned_cols=65 Identities=25% Similarity=0.313 Sum_probs=44.2
Q ss_pred ceeEecCCCccHH--------------HHHHHHHhcCCCCCc-eEEEeccccCCCCC-C-----HHHHHHHHHhhhhCCC
Q 026605 55 PVTICGDIHGQFH--------------DLAELFQIGGKCPDT-NYLFMGDYVDRGYY-S-----VETVTLLVALKVRYPQ 113 (236)
Q Consensus 55 ~i~vigDIHG~~~--------------~L~~ll~~~~~~~~~-~~v~LGD~vdrG~~-s-----~e~l~~l~~lk~~~p~ 113 (236)
+++.++|+||++. .+..+++..+....+ -++..||++...+. + ..+++.+.++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 5788999999854 367777776644333 46669999977654 2 346677766632
Q ss_pred CeEEEccCccc
Q 026605 114 RITILRGNHES 124 (236)
Q Consensus 114 ~v~~lrGNHE~ 124 (236)
-.+..||||.
T Consensus 78 -Da~t~GNHef 87 (288)
T cd07412 78 -DASAVGNHEF 87 (288)
T ss_pred -eeeeeccccc
Confidence 2466699996
No 94
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=96.27 E-value=0.0072 Score=52.18 Aligned_cols=65 Identities=23% Similarity=0.193 Sum_probs=41.7
Q ss_pred ceeEecCCCccH----------------------HHHHHHHHhcCCC-CCceE-EEeccccCCCCCC-----HHHHHHHH
Q 026605 55 PVTICGDIHGQF----------------------HDLAELFQIGGKC-PDTNY-LFMGDYVDRGYYS-----VETVTLLV 105 (236)
Q Consensus 55 ~i~vigDIHG~~----------------------~~L~~ll~~~~~~-~~~~~-v~LGD~vdrG~~s-----~e~l~~l~ 105 (236)
.++.++|+||++ ..+..++++.... ..+.+ +..||+++..+.+ ..++..+.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 467788888874 4456666766554 45555 4599999877643 34566666
Q ss_pred HhhhhCCCCeEEEccCcccc
Q 026605 106 ALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 106 ~lk~~~p~~v~~lrGNHE~~ 125 (236)
++ .+..+-||||..
T Consensus 82 ~~------g~da~~GNHefd 95 (264)
T cd07411 82 AL------GVDAMVGHWEFT 95 (264)
T ss_pred hh------CCeEEecccccc
Confidence 65 333333999964
No 95
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=95.83 E-value=0.0099 Score=43.53 Aligned_cols=45 Identities=18% Similarity=0.121 Sum_probs=34.7
Q ss_pred CCCccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhhcCCcccc
Q 026605 8 TDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPV 52 (236)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~ 52 (236)
..+...+..+++.+.+++.|+...+..|+.++.++|+++|+++++
T Consensus 51 ~it~efv~~mie~FK~~K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 51 PITLEFVKAMIEWFKNQKKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp B--HHHHHHHHHHHHCT----HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 455667889999999999999999999999999999999999864
No 96
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=95.55 E-value=0.028 Score=48.33 Aligned_cols=65 Identities=26% Similarity=0.206 Sum_probs=44.7
Q ss_pred ceeEecCCC----------ccHHHHHHHHHhcCCCCCc-eEEEeccccCCCCC-----CHHHHHHHHHhhhhCCCCeEEE
Q 026605 55 PVTICGDIH----------GQFHDLAELFQIGGKCPDT-NYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQRITIL 118 (236)
Q Consensus 55 ~i~vigDIH----------G~~~~L~~ll~~~~~~~~~-~~v~LGD~vdrG~~-----s~e~l~~l~~lk~~~p~~v~~l 118 (236)
++.-+.|+| |.+..+..++++......+ -++..||+++..+. ...+++.+..+. --+.+
T Consensus 2 ~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~ 76 (257)
T cd07406 2 TILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLAC 76 (257)
T ss_pred eEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEe
Confidence 355667777 3467788888877655445 46669999987753 345777777663 24667
Q ss_pred ccCccc
Q 026605 119 RGNHES 124 (236)
Q Consensus 119 rGNHE~ 124 (236)
.||||.
T Consensus 77 ~GNHef 82 (257)
T cd07406 77 FGNHEF 82 (257)
T ss_pred eccccc
Confidence 899997
No 97
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=95.50 E-value=0.035 Score=48.45 Aligned_cols=66 Identities=18% Similarity=0.223 Sum_probs=42.1
Q ss_pred ceeEecCCCccH---------------------HHHHHHHHhcCCCCCceEEE-eccccCCCCC-----CHHHHHHHHHh
Q 026605 55 PVTICGDIHGQF---------------------HDLAELFQIGGKCPDTNYLF-MGDYVDRGYY-----SVETVTLLVAL 107 (236)
Q Consensus 55 ~i~vigDIHG~~---------------------~~L~~ll~~~~~~~~~~~v~-LGD~vdrG~~-----s~e~l~~l~~l 107 (236)
+++-++|+||++ ..+..+++..+....+.+++ .||++...+. ...+++.+..+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 477889999864 55666777665444444444 8999987653 34455665555
Q ss_pred hhhCCCCeEEEccCcccc
Q 026605 108 KVRYPQRITILRGNHESR 125 (236)
Q Consensus 108 k~~~p~~v~~lrGNHE~~ 125 (236)
.. . .+..||||.-
T Consensus 82 g~----D-~~~lGNHefd 94 (281)
T cd07409 82 GY----D-AMTLGNHEFD 94 (281)
T ss_pred CC----C-EEEecccccc
Confidence 21 3 4455999974
No 98
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=95.45 E-value=0.02 Score=59.38 Aligned_cols=66 Identities=18% Similarity=0.225 Sum_probs=46.5
Q ss_pred CceeEecCCCccH---HHHHHHHHhcCCCCCceEEE-eccccCCCCCC-----HHHHHHHHHhhhhCCCCeEEEccCccc
Q 026605 54 SPVTICGDIHGQF---HDLAELFQIGGKCPDTNYLF-MGDYVDRGYYS-----VETVTLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 54 ~~i~vigDIHG~~---~~L~~ll~~~~~~~~~~~v~-LGD~vdrG~~s-----~e~l~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
.+++.++|+||.+ ..+..+++.......+.+++ .||+++..+.+ ..+++.+.++. --.+..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEeccccc
Confidence 4799999999874 56666677665444555555 89999887644 35666666652 23668999996
No 99
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=95.37 E-value=0.0049 Score=56.91 Aligned_cols=109 Identities=14% Similarity=0.041 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHHHHhhcCCccccC----CceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHH
Q 026605 27 LSEPQVKALCEKAKEILMEESNVQPVK----SPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVT 102 (236)
Q Consensus 27 ~~~~~~~~l~~~~~~~~~~e~~~~~~~----~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~ 102 (236)
+...++..+.+.+.+++..+|+-...- --.+.++|.||.+.++.++++.- .....-+++-|++++++....+.+.
T Consensus 15 l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d-P~~~K~Y~rrg~a~m~l~~~~~A~~ 93 (476)
T KOG0376|consen 15 LKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD-PTYIKAYVRRGTAVMALGEFKKALL 93 (476)
T ss_pred cccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC-chhhheeeeccHHHHhHHHHHHHHH
Confidence 455677888888999999999765431 34788999999999988888754 2223448999999999999999999
Q ss_pred HHHHhhhhCCCCeEEEccCccccccccccCcHHH
Q 026605 103 LLVALKVRYPQRITILRGNHESRQITQVYGFYDE 136 (236)
Q Consensus 103 ~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~e 136 (236)
.+...+...|+...+.|++||+..+-..++|..+
T Consensus 94 ~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~a 127 (476)
T KOG0376|consen 94 DLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKA 127 (476)
T ss_pred HHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999999999999999999999877666555543
No 100
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=95.17 E-value=0.056 Score=48.22 Aligned_cols=73 Identities=18% Similarity=0.195 Sum_probs=45.8
Q ss_pred CceeEecCCCccHH-----------------HHH--HHH-HhcCCCCCceEEEeccccCCCC--CCHHHHHHHHHhhhhC
Q 026605 54 SPVTICGDIHGQFH-----------------DLA--ELF-QIGGKCPDTNYLFMGDYVDRGY--YSVETVTLLVALKVRY 111 (236)
Q Consensus 54 ~~i~vigDIHG~~~-----------------~L~--~ll-~~~~~~~~~~~v~LGD~vdrG~--~s~e~l~~l~~lk~~~ 111 (236)
-||+-++|+|=.+. ++. ..+ +.+.....|-+||+||.|+.-. +...++....+-.+.+
T Consensus 54 fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 54 FKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred eEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccccccHhHHHHHHHHhhhHhhc
Confidence 37899999993332 221 111 2233456788999999998621 2334455544545555
Q ss_pred CCCeEEEccCccccc
Q 026605 112 PQRITILRGNHESRQ 126 (236)
Q Consensus 112 p~~v~~lrGNHE~~~ 126 (236)
.-...++.||||+..
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 456889999999964
No 101
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=95.10 E-value=0.054 Score=47.09 Aligned_cols=67 Identities=15% Similarity=0.122 Sum_probs=51.9
Q ss_pred CceeEecCCCcc--HHHHHHHHHhcCCC-CCceEEEeccccCCC-CCCHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 54 SPVTICGDIHGQ--FHDLAELFQIGGKC-PDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 54 ~~i~vigDIHG~--~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG-~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
||+.++|||=|. ...+...|..+... +.|-+|..||...-| .-+.++.+.|.++-. .+..+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 789999999999 57888888877654 456677799999766 467889999987732 45555 999983
No 102
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=94.64 E-value=0.057 Score=47.14 Aligned_cols=72 Identities=24% Similarity=0.273 Sum_probs=45.4
Q ss_pred ceeEecCCCcc---HHHHHHHHHhcCCC--CCceEEEeccccCCCCCCH--H------HHHHHHHhhhhCC-CCeEEEcc
Q 026605 55 PVTICGDIHGQ---FHDLAELFQIGGKC--PDTNYLFMGDYVDRGYYSV--E------TVTLLVALKVRYP-QRITILRG 120 (236)
Q Consensus 55 ~i~vigDIHG~---~~~L~~ll~~~~~~--~~~~~v~LGD~vdrG~~s~--e------~l~~l~~lk~~~p-~~v~~lrG 120 (236)
+..-.|+-. | ...++++++.+... +.+-+|+.||+++.+.... + .-.+...++..+| -.++.+.|
T Consensus 39 ~~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~G 117 (296)
T cd00842 39 PAGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALG 117 (296)
T ss_pred CCCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCC
Confidence 344456654 4 46677777776654 7788999999998876421 1 1222333333333 35999999
Q ss_pred Ccccccc
Q 026605 121 NHESRQI 127 (236)
Q Consensus 121 NHE~~~~ 127 (236)
|||..-.
T Consensus 118 NHD~~p~ 124 (296)
T cd00842 118 NHDSYPV 124 (296)
T ss_pred CCCCCcc
Confidence 9998644
No 103
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.30 E-value=0.54 Score=43.88 Aligned_cols=114 Identities=20% Similarity=0.249 Sum_probs=58.4
Q ss_pred ceeEecCCC-ccH----HHHHHHHHhcCCCC-----CceEEEeccccCC-CCC-----------CHHHHHHHHHhhhhCC
Q 026605 55 PVTICGDIH-GQF----HDLAELFQIGGKCP-----DTNYLFMGDYVDR-GYY-----------SVETVTLLVALKVRYP 112 (236)
Q Consensus 55 ~i~vigDIH-G~~----~~L~~ll~~~~~~~-----~~~~v~LGD~vdr-G~~-----------s~e~l~~l~~lk~~~p 112 (236)
++++++|+| |.. +++.+.++.+.-+. ..-+++.||.||. |-+ ..+-.+.+..+-..-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 589999999 444 34444555444322 1236668999994 322 1223333333333334
Q ss_pred C--CeEEEccCccccccccccCcHHHH-HHHhCCchhHHHHHHHhccCcceEE-ECcEEEEEeCCC
Q 026605 113 Q--RITILRGNHESRQITQVYGFYDEC-LRKYGNANIWKIFTDLFDYFPLTAL-SQKYSVCMVGCP 174 (236)
Q Consensus 113 ~--~v~~lrGNHE~~~~~~~~~f~~e~-~~~~~~~~l~~~~~~~~~~LP~~~~-~~~~~~~~hg~~ 174 (236)
. .+++.+||||..-.........+. ...| ....-.|-.=|.... .+..++..||-.
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~kslf------~~~n~~~v~NP~~~~l~G~~vL~~hG~s 366 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELIKSLF------SLNNLLFVSNPALVSLHGVDVLIYHGRS 366 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhhcccc------cccceEecCCCcEEEECCEEEEEecCCC
Confidence 3 478999999996543332222221 1112 111111222233333 467888888853
No 104
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=94.13 E-value=0.073 Score=47.80 Aligned_cols=72 Identities=19% Similarity=0.346 Sum_probs=45.9
Q ss_pred CceeEecCCCccHHHHHHH---HHhcCCCCCceEEEeccccC-CC---CCCHH-------HHHHHHHh--hhhCCCCeEE
Q 026605 54 SPVTICGDIHGQFHDLAEL---FQIGGKCPDTNYLFMGDYVD-RG---YYSVE-------TVTLLVAL--KVRYPQRITI 117 (236)
Q Consensus 54 ~~i~vigDIHG~~~~L~~l---l~~~~~~~~~~~v~LGD~vd-rG---~~s~e-------~l~~l~~l--k~~~p~~v~~ 117 (236)
|||+|=|=-||.++.+-+- .++.+..+.|.++|+||+=. |. -.++. .=.+..-. .+..|---.+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 7899999999999988744 45555668899999999831 11 11211 11111111 1234444578
Q ss_pred EccCcccc
Q 026605 118 LRGNHESR 125 (236)
Q Consensus 118 lrGNHE~~ 125 (236)
|-||||..
T Consensus 81 IGGNHEAs 88 (456)
T KOG2863|consen 81 IGGNHEAS 88 (456)
T ss_pred ecCchHHH
Confidence 99999995
No 105
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=94.00 E-value=0.076 Score=46.46 Aligned_cols=66 Identities=18% Similarity=0.069 Sum_probs=39.5
Q ss_pred ceeEecCCCccHHH----------HHHHHHhcCC-----CCCceEEEeccccCCCCC-----CHHHHHHHHHhhhhCCCC
Q 026605 55 PVTICGDIHGQFHD----------LAELFQIGGK-----CPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYPQR 114 (236)
Q Consensus 55 ~i~vigDIHG~~~~----------L~~ll~~~~~-----~~~~~~v~LGD~vdrG~~-----s~e~l~~l~~lk~~~p~~ 114 (236)
+|+.++|+||++.. +..+++.++. .+..-++-.||.+...+. ...+++++.++.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 47889999998533 5555655442 222334448999844332 2445666666632 2
Q ss_pred eEEEccCcccc
Q 026605 115 ITILRGNHESR 125 (236)
Q Consensus 115 v~~lrGNHE~~ 125 (236)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 455999974
No 106
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=93.90 E-value=0.11 Score=46.28 Aligned_cols=65 Identities=23% Similarity=0.208 Sum_probs=42.2
Q ss_pred ceeEecCCCccH------HHHHHHHHhcCC-----CCCceEEEeccccCCCCC-------------CHHHHHHHHHhhhh
Q 026605 55 PVTICGDIHGQF------HDLAELFQIGGK-----CPDTNYLFMGDYVDRGYY-------------SVETVTLLVALKVR 110 (236)
Q Consensus 55 ~i~vigDIHG~~------~~L~~ll~~~~~-----~~~~~~v~LGD~vdrG~~-------------s~e~l~~l~~lk~~ 110 (236)
.|+-+.|+||++ ..+..+++..+. .+..-++..||.+..++. ...+++++.++.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 467789999995 345455555432 223345558999876543 345677777773
Q ss_pred CCCCeEEEccCccc
Q 026605 111 YPQRITILRGNHES 124 (236)
Q Consensus 111 ~p~~v~~lrGNHE~ 124 (236)
--.+..||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 24577899996
No 107
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.84 E-value=0.41 Score=37.91 Aligned_cols=115 Identities=20% Similarity=0.170 Sum_probs=75.3
Q ss_pred ceeEecCCCcc--HHHHHHHHHhcCCCC-CceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccccccccc
Q 026605 55 PVTICGDIHGQ--FHDLAELFQIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVY 131 (236)
Q Consensus 55 ~i~vigDIHG~--~~~L~~ll~~~~~~~-~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~ 131 (236)
=+.++||+|=- ..+|-+-++++--++ -..++|+|++. |.|.+++|+.+. ..++++||.-|..
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~------ 66 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDEN------ 66 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCcc------
Confidence 36799999843 345555555443333 46799999975 579999998884 3799999988774
Q ss_pred CcHHHHHHHhCCchhHHHHHHHhccCcceEE---ECcEEEEEeCCCccccccccccceeeeecc-cccCCcEEEecCcee
Q 026605 132 GFYDECLRKYGNANIWKIFTDLFDYFPLTAL---SQKYSVCMVGCPLQLKLLIISGTLIVFKRF-LMKGPCVICYGLTQM 207 (236)
Q Consensus 132 ~f~~e~~~~~~~~~l~~~~~~~~~~LP~~~~---~~~~~~~~hg~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gh~~~ 207 (236)
...|...+ ..-++=++||- ..+++.++...... .+...+++..||+..
T Consensus 67 -----------------------~~yP~~kvvtvGqfkIG~chGh-----qViP~gd~~sL~~LaRqldvDILl~G~Th~ 118 (183)
T KOG3325|consen 67 -----------------------LKYPENKVVTVGQFKIGLCHGH-----QVIPWGDPESLALLARQLDVDILLTGHTHK 118 (183)
T ss_pred -----------------------ccCCccceEEeccEEEEeecCc-----EeecCCCHHHHHHHHHhcCCcEEEeCCcee
Confidence 12233322 34467788884 33444555544333 355778888899888
Q ss_pred EeEec
Q 026605 208 IDVVG 212 (236)
Q Consensus 208 ~~v~g 212 (236)
..+|.
T Consensus 119 f~Aye 123 (183)
T KOG3325|consen 119 FEAYE 123 (183)
T ss_pred EEEEE
Confidence 87665
No 108
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=93.73 E-value=0.17 Score=46.35 Aligned_cols=73 Identities=19% Similarity=0.392 Sum_probs=47.7
Q ss_pred CCceeEecCCC--ccH---------------HHHHHHHHhcC-CCCCceEEEeccccCCCCCC--HHHHHHHHHhhhhCC
Q 026605 53 KSPVTICGDIH--GQF---------------HDLAELFQIGG-KCPDTNYLFMGDYVDRGYYS--VETVTLLVALKVRYP 112 (236)
Q Consensus 53 ~~~i~vigDIH--G~~---------------~~L~~ll~~~~-~~~~~~~v~LGD~vdrG~~s--~e~l~~l~~lk~~~p 112 (236)
..|++.|+|-| |+. --|.+.++..- .-..|-++||||++|-|... .|=-+....++..++
T Consensus 48 ~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~ 127 (410)
T KOG3662|consen 48 STKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFG 127 (410)
T ss_pred ceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhC
Confidence 34899999955 522 12334443333 24567789999999998864 344455555655555
Q ss_pred C----CeEEEccCcccc
Q 026605 113 Q----RITILRGNHESR 125 (236)
Q Consensus 113 ~----~v~~lrGNHE~~ 125 (236)
. .+..+.||||--
T Consensus 128 ~k~~~~~~~i~GNhDIG 144 (410)
T KOG3662|consen 128 RKGNIKVIYIAGNHDIG 144 (410)
T ss_pred CCCCCeeEEeCCccccc
Confidence 3 588999999984
No 109
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=93.53 E-value=0.1 Score=45.71 Aligned_cols=67 Identities=19% Similarity=0.132 Sum_probs=40.3
Q ss_pred CceeEecCCCccHH-------------HHHHHHHh----cCCCCCce-EEEeccccCCCCCC-------HHHHHHHHHhh
Q 026605 54 SPVTICGDIHGQFH-------------DLAELFQI----GGKCPDTN-YLFMGDYVDRGYYS-------VETVTLLVALK 108 (236)
Q Consensus 54 ~~i~vigDIHG~~~-------------~L~~ll~~----~~~~~~~~-~v~LGD~vdrG~~s-------~e~l~~l~~lk 108 (236)
-+|+-++|+||++. .+.++.+. .+....+. ++..||.+...+.+ .-+++++..+.
T Consensus 6 ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg 85 (282)
T cd07407 6 INFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP 85 (282)
T ss_pred EEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC
Confidence 36889999999753 12233222 22222333 44589998765432 33566666662
Q ss_pred hhCCCCeEEEccCcccc
Q 026605 109 VRYPQRITILRGNHESR 125 (236)
Q Consensus 109 ~~~p~~v~~lrGNHE~~ 125 (236)
--.+..||||.-
T Consensus 86 -----yDa~tlGNHEFd 97 (282)
T cd07407 86 -----YDLLTIGNHELY 97 (282)
T ss_pred -----CcEEeecccccC
Confidence 356888999994
No 110
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=93.51 E-value=0.11 Score=50.56 Aligned_cols=66 Identities=18% Similarity=0.111 Sum_probs=42.9
Q ss_pred CceeEecCCCccHH----------------HHHHHHHhcCCCC-CceEEEeccccCCCCCC-------------HHHHHH
Q 026605 54 SPVTICGDIHGQFH----------------DLAELFQIGGKCP-DTNYLFMGDYVDRGYYS-------------VETVTL 103 (236)
Q Consensus 54 ~~i~vigDIHG~~~----------------~L~~ll~~~~~~~-~~~~v~LGD~vdrG~~s-------------~e~l~~ 103 (236)
-+|+-..|+||++. .+..++++++... +.-++-.||.+...+.+ .-+++.
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 36888999999964 3455666655332 33455599999765533 235666
Q ss_pred HHHhhhhCCCCeEEEccCccc
Q 026605 104 LVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 104 l~~lk~~~p~~v~~lrGNHE~ 124 (236)
+..+. --....||||.
T Consensus 83 mN~lg-----yDa~tlGNHEF 98 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEF 98 (626)
T ss_pred HhhcC-----ccEEecccccc
Confidence 66663 24577899996
No 111
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=93.51 E-value=0.11 Score=49.12 Aligned_cols=68 Identities=28% Similarity=0.277 Sum_probs=46.6
Q ss_pred CCceeEecCCCccHH---------------HHHHHHHhcCCCCCce-EEEeccccCCCC------CCHHHHHHHHHhhhh
Q 026605 53 KSPVTICGDIHGQFH---------------DLAELFQIGGKCPDTN-YLFMGDYVDRGY------YSVETVTLLVALKVR 110 (236)
Q Consensus 53 ~~~i~vigDIHG~~~---------------~L~~ll~~~~~~~~~~-~v~LGD~vdrG~------~s~e~l~~l~~lk~~ 110 (236)
+-+|+-+.|+||++. ....++++.+...... +|=.||+++..+ .....++++..++
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 557999999999998 3444455554433344 444899998843 3455777777774
Q ss_pred CCCCeEEEccCcccc
Q 026605 111 YPQRITILRGNHESR 125 (236)
Q Consensus 111 ~p~~v~~lrGNHE~~ 125 (236)
-=.+..||||.-
T Consensus 104 ---yDa~tiGNHEFd 115 (517)
T COG0737 104 ---YDAMTLGNHEFD 115 (517)
T ss_pred ---CcEEeecccccc
Confidence 346778999984
No 112
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=93.40 E-value=0.12 Score=50.56 Aligned_cols=69 Identities=17% Similarity=0.132 Sum_probs=45.9
Q ss_pred ccCCceeEecCCCccHH----------------HHHHHHHhcCCC-CCceEEEeccccCCCCCCH-------------HH
Q 026605 51 PVKSPVTICGDIHGQFH----------------DLAELFQIGGKC-PDTNYLFMGDYVDRGYYSV-------------ET 100 (236)
Q Consensus 51 ~~~~~i~vigDIHG~~~----------------~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s~-------------e~ 100 (236)
....+|+-.+|+||++. .+..++++++.. ++.-++-.||.+...+.+- .+
T Consensus 23 ~~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~ 102 (649)
T PRK09420 23 TVDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPV 102 (649)
T ss_pred CceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchH
Confidence 34668999999999963 345566666533 3334555999997665431 35
Q ss_pred HHHHHHhhhhCCCCeEEEccCccc
Q 026605 101 VTLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 101 l~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
++.+..+. --....||||.
T Consensus 103 i~amN~lg-----yDa~tlGNHEF 121 (649)
T PRK09420 103 YKAMNTLD-----YDVGNLGNHEF 121 (649)
T ss_pred HHHHHhcC-----CcEEeccchhh
Confidence 66666663 34678899997
No 113
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=93.20 E-value=0.21 Score=43.19 Aligned_cols=66 Identities=20% Similarity=0.192 Sum_probs=48.1
Q ss_pred ceeEecCCCccH--HHHHHHHHhcCCC-CCceEEEeccccCCC-CCCHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 55 PVTICGDIHGQF--HDLAELFQIGGKC-PDTNYLFMGDYVDRG-YYSVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 55 ~i~vigDIHG~~--~~L~~ll~~~~~~-~~~~~v~LGD~vdrG-~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
|+.+||||=|.- ..+...|..+... +.|-++..||...-| .-+.++.+.+..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 588999999986 5667777776543 345666689998766 467888888888742 34444 999863
No 114
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=93.17 E-value=0.061 Score=51.49 Aligned_cols=47 Identities=21% Similarity=0.280 Sum_probs=39.6
Q ss_pred CCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccc
Q 026605 79 CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQV 130 (236)
Q Consensus 79 ~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~ 130 (236)
-..|++=.+||+.||||.|-.+++.|+..- +|=+-=||||--++...
T Consensus 183 L~VDhLHIvGDIyDRGp~pd~ImD~Lm~~h-----svDIQWGNHDIlWMGAa 229 (640)
T PF06874_consen 183 LAVDHLHIVGDIYDRGPRPDKIMDRLMNYH-----SVDIQWGNHDILWMGAA 229 (640)
T ss_pred HhhhheeecccccCCCCChhHHHHHHhcCC-----CccccccchHHHHHHHh
Confidence 346788999999999999999999999763 67788899999776544
No 115
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=92.87 E-value=0.15 Score=53.18 Aligned_cols=67 Identities=24% Similarity=0.273 Sum_probs=44.4
Q ss_pred CCceeEecCCCccH----------------HHHHHHHHhcCCCCCceEEE-eccccCCCCC--------------CHHHH
Q 026605 53 KSPVTICGDIHGQF----------------HDLAELFQIGGKCPDTNYLF-MGDYVDRGYY--------------SVETV 101 (236)
Q Consensus 53 ~~~i~vigDIHG~~----------------~~L~~ll~~~~~~~~~~~v~-LGD~vdrG~~--------------s~e~l 101 (236)
.-+|+-++|+||++ ..+..+++.++....+.+++ .||.+...+. ...++
T Consensus 41 ~l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i 120 (1163)
T PRK09419 41 NIQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMI 120 (1163)
T ss_pred EEEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHH
Confidence 45799999999986 34455666665444445555 8999976651 23456
Q ss_pred HHHHHhhhhCCCCeEEEccCccc
Q 026605 102 TLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
..+..+. --.+..||||.
T Consensus 121 ~~mN~lg-----yDa~~lGNHEF 138 (1163)
T PRK09419 121 KAMNALG-----YDAGTLGNHEF 138 (1163)
T ss_pred HHHhhcC-----ccEEeeccccc
Confidence 6665552 34577899997
No 116
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=92.13 E-value=0.23 Score=49.64 Aligned_cols=67 Identities=21% Similarity=0.110 Sum_probs=43.5
Q ss_pred CCceeEecCCCccHH----------------HHHHHHHhcCCCC-CceEEEeccccCCCCCC--------------HHHH
Q 026605 53 KSPVTICGDIHGQFH----------------DLAELFQIGGKCP-DTNYLFMGDYVDRGYYS--------------VETV 101 (236)
Q Consensus 53 ~~~i~vigDIHG~~~----------------~L~~ll~~~~~~~-~~~~v~LGD~vdrG~~s--------------~e~l 101 (236)
.-+|+-..|+||++. .+..+++.++... +.-++-.||++...+.+ ..++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 457899999999953 3344555554333 33455599999765432 1366
Q ss_pred HHHHHhhhhCCCCeEEEccCccc
Q 026605 102 TLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 102 ~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
+.+..+. --.+..||||.
T Consensus 195 ~amN~LG-----yDA~tLGNHEF 212 (814)
T PRK11907 195 AALEALG-----FDAGTLGNHEF 212 (814)
T ss_pred HHHhccC-----CCEEEechhhc
Confidence 6666663 34678899997
No 117
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.05 E-value=0.45 Score=44.08 Aligned_cols=69 Identities=22% Similarity=0.384 Sum_probs=51.9
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCC--CCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCc
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 122 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~--~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNH 122 (236)
..+|.|+||.-|++..|-+-++.... .+.|-++|+|++++-.....|++.+....+ ..|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~-~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTK-KVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCc-cCceeEEEecCCC
Confidence 47999999999999887666655543 346889999999997667777777776553 4566677777765
No 118
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=91.04 E-value=0.46 Score=45.53 Aligned_cols=66 Identities=20% Similarity=0.123 Sum_probs=41.3
Q ss_pred ceeEecCCCccH---------------------HHHHHHHHhcCCC-CCceEEEeccccCCCCCC-----HHHHHHHHHh
Q 026605 55 PVTICGDIHGQF---------------------HDLAELFQIGGKC-PDTNYLFMGDYVDRGYYS-----VETVTLLVAL 107 (236)
Q Consensus 55 ~i~vigDIHG~~---------------------~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s-----~e~l~~l~~l 107 (236)
.|+-+.|+||++ ..+..++++.+.. ++.-++..||.+...+.+ ...++++.++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 356677888764 3345556655533 334456699998766533 3456666665
Q ss_pred hhhCCCCeEEEccCcccc
Q 026605 108 KVRYPQRITILRGNHESR 125 (236)
Q Consensus 108 k~~~p~~v~~lrGNHE~~ 125 (236)
. --.+..||||.-
T Consensus 82 g-----~Da~~lGNHEFd 94 (550)
T TIGR01530 82 G-----FDFFTLGNHEFD 94 (550)
T ss_pred C-----CCEEEecccccc
Confidence 3 356888999973
No 119
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=90.35 E-value=0.38 Score=39.70 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=42.1
Q ss_pred eeEecCCCcc-----HHHHHHHHHhcC-CCCCceEEEeccccCCCCCC----------HHHHHHHHHhhhhC-----CCC
Q 026605 56 VTICGDIHGQ-----FHDLAELFQIGG-KCPDTNYLFMGDYVDRGYYS----------VETVTLLVALKVRY-----PQR 114 (236)
Q Consensus 56 i~vigDIHG~-----~~~L~~ll~~~~-~~~~~~~v~LGD~vdrG~~s----------~e~l~~l~~lk~~~-----p~~ 114 (236)
|+++||+|=. ++.|..+|+... ....+.+|++|++++.-... ......+..+.... --+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677887643 678888888887 77778899999999863211 11122222222111 136
Q ss_pred eEEEccCcccccc
Q 026605 115 ITILRGNHESRQI 127 (236)
Q Consensus 115 v~~lrGNHE~~~~ 127 (236)
++++.|+||-...
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 8999999998765
No 120
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=90.27 E-value=0.95 Score=42.89 Aligned_cols=58 Identities=19% Similarity=0.195 Sum_probs=45.5
Q ss_pred cCCceeEecCCCc------------cHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHH----HHHHHHHhhh
Q 026605 52 VKSPVTICGDIHG------------QFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVE----TVTLLVALKV 109 (236)
Q Consensus 52 ~~~~i~vigDIHG------------~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e----~l~~l~~lk~ 109 (236)
-.+||.|-.|+|= .|.+|+.+|..+.....|.++.-||++.-..-|.. |+++|+..+.
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~lLRryCl 85 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLELLRRYCL 85 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHHHHHHcc
Confidence 3569999999992 36789999999998899999999999988777755 4555555443
No 121
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=89.99 E-value=0.67 Score=42.50 Aligned_cols=72 Identities=10% Similarity=0.044 Sum_probs=43.1
Q ss_pred CCceeEecCC-CccHHH--HHHHHHh-cCCCCCceEEEeccccCCCCCCH------HHHHHHHHhhh-hCCCCeEEEccC
Q 026605 53 KSPVTICGDI-HGQFHD--LAELFQI-GGKCPDTNYLFMGDYVDRGYYSV------ETVTLLVALKV-RYPQRITILRGN 121 (236)
Q Consensus 53 ~~~i~vigDI-HG~~~~--L~~ll~~-~~~~~~~~~v~LGD~vdrG~~s~------e~l~~l~~lk~-~~p~~v~~lrGN 121 (236)
.-+++++||- -|.... ..+.+.. +...+.+-++-+||.++.|..++ +.++-+..-.. ...-.++++.||
T Consensus 26 ~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGN 105 (394)
T PTZ00422 26 QLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQ 105 (394)
T ss_pred eEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCc
Confidence 4479999994 343322 2223332 33456777888999998787653 33444432211 011259999999
Q ss_pred ccc
Q 026605 122 HES 124 (236)
Q Consensus 122 HE~ 124 (236)
||.
T Consensus 106 HDy 108 (394)
T PTZ00422 106 ADW 108 (394)
T ss_pred ccc
Confidence 997
No 122
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=88.86 E-value=0.56 Score=46.79 Aligned_cols=68 Identities=22% Similarity=0.171 Sum_probs=42.9
Q ss_pred cCCceeEecCCCccHH----------------HHHHHHHhcCCC-CCceEEEeccccCCCCC------------------
Q 026605 52 VKSPVTICGDIHGQFH----------------DLAELFQIGGKC-PDTNYLFMGDYVDRGYY------------------ 96 (236)
Q Consensus 52 ~~~~i~vigDIHG~~~----------------~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~------------------ 96 (236)
..-+|+-.+|+||++. .+..++++++.. ++.-++-.||.+...+.
T Consensus 38 ~~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~ 117 (780)
T PRK09418 38 VNLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPS 117 (780)
T ss_pred eEEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccc
Confidence 3557999999999963 244555555433 33345559998854332
Q ss_pred -CHHHHHHHHHhhhhCCCCeEEEccCccc
Q 026605 97 -SVETVTLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 97 -s~e~l~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
...+++++..+. --.+..||||.
T Consensus 118 ~~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 118 YTHPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred cchHHHHHHhccC-----CCEEecccccc
Confidence 123666666663 34677899996
No 123
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=88.16 E-value=0.78 Score=42.68 Aligned_cols=47 Identities=26% Similarity=0.406 Sum_probs=38.7
Q ss_pred CceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccC
Q 026605 81 DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYG 132 (236)
Q Consensus 81 ~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~ 132 (236)
.|.+=.+||+.||||+|-.+++.|..+- .+-+==||||--.+....|
T Consensus 191 VDhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWmgA~sG 237 (648)
T COG3855 191 VDHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWMGAASG 237 (648)
T ss_pred hhheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEeecccC
Confidence 5677889999999999999999998773 5667779999987765544
No 124
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=88.12 E-value=1.6 Score=37.75 Aligned_cols=72 Identities=14% Similarity=0.241 Sum_probs=41.5
Q ss_pred eeEecCCC-cc----HHHHHHHHHhcC-C----------CCCceEEEeccccCCCCCC------------------HHHH
Q 026605 56 VTICGDIH-GQ----FHDLAELFQIGG-K----------CPDTNYLFMGDYVDRGYYS------------------VETV 101 (236)
Q Consensus 56 i~vigDIH-G~----~~~L~~ll~~~~-~----------~~~~~~v~LGD~vdrG~~s------------------~e~l 101 (236)
+++|||+| |. ...|+.+.+.+. . ....++|+.||.|+.-... .+.+
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 68899998 32 244444444332 1 1123699999999864322 2222
Q ss_pred H----HHHHhhhhCCCCeEEEccCcccccccc
Q 026605 102 T----LLVALKVRYPQRITILRGNHESRQITQ 129 (236)
Q Consensus 102 ~----~l~~lk~~~p~~v~~lrGNHE~~~~~~ 129 (236)
. +|.++...- .|.++.||||-.....
T Consensus 82 ~~ld~~l~~l~~~i--~V~imPG~~Dp~~~~l 111 (257)
T cd07387 82 KELDNFLSQLASSV--PVDLMPGEFDPANHSL 111 (257)
T ss_pred HHHHHHHHhhhcCC--eEEECCCCCCcccccC
Confidence 2 333332222 4889999999975543
No 125
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=86.97 E-value=0.86 Score=42.35 Aligned_cols=74 Identities=19% Similarity=0.152 Sum_probs=40.9
Q ss_pred cCCceeEecCCCccHHHHHHHHHhcCCC-CCceEEEeccccCCCCCC----HHHHHHHHHhhhhCCCCeEEEccCccccc
Q 026605 52 VKSPVTICGDIHGQFHDLAELFQIGGKC-PDTNYLFMGDYVDRGYYS----VETVTLLVALKVRYPQRITILRGNHESRQ 126 (236)
Q Consensus 52 ~~~~i~vigDIHG~~~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~s----~e~l~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (236)
..-+++|+||+ |+...=...+...... ..+-++++||+.---.++ -+-.+++..+...- ...+.-||||.-.
T Consensus 146 ~~~~~~i~GDl-G~~~~~~s~~~~~~~~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~v--Pymv~~GNHE~d~ 222 (452)
T KOG1378|consen 146 SPTRAAIFGDM-GCTEPYTSTLRNQEENLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYV--PYMVCSGNHEIDW 222 (452)
T ss_pred CceeEEEEccc-cccccccchHhHHhcccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccC--ceEEecccccccC
Confidence 45689999997 3332222222222222 467899999986322222 22233333332222 3778999999976
Q ss_pred cc
Q 026605 127 IT 128 (236)
Q Consensus 127 ~~ 128 (236)
.+
T Consensus 223 ~~ 224 (452)
T KOG1378|consen 223 PP 224 (452)
T ss_pred CC
Confidence 63
No 126
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=85.38 E-value=1.4 Score=38.54 Aligned_cols=71 Identities=24% Similarity=0.247 Sum_probs=41.9
Q ss_pred CceeEecC--CCccHHHHHHHHH--hcC-CCCCceEEEecccc-CCCCCCH------HHHHHHHHhhhhCCCCeEEEccC
Q 026605 54 SPVTICGD--IHGQFHDLAELFQ--IGG-KCPDTNYLFMGDYV-DRGYYSV------ETVTLLVALKVRYPQRITILRGN 121 (236)
Q Consensus 54 ~~i~vigD--IHG~~~~L~~ll~--~~~-~~~~~~~v~LGD~v-drG~~s~------e~l~~l~~lk~~~p~~v~~lrGN 121 (236)
-++.|||| -+|.+..=+..+. .++ .-..+-++-+||-+ |-|..+. +.+.=+..-... .+..+.|.||
T Consensus 44 lsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSL-QkpWy~vlGN 122 (336)
T KOG2679|consen 44 LSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSL-QKPWYSVLGN 122 (336)
T ss_pred eEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCccc-ccchhhhccC
Confidence 47999999 5888855444433 233 34456688899976 5565432 122222111100 1258899999
Q ss_pred cccc
Q 026605 122 HESR 125 (236)
Q Consensus 122 HE~~ 125 (236)
||.+
T Consensus 123 HDyr 126 (336)
T KOG2679|consen 123 HDYR 126 (336)
T ss_pred cccc
Confidence 9985
No 127
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=83.81 E-value=1.3 Score=42.48 Aligned_cols=68 Identities=21% Similarity=0.092 Sum_probs=40.5
Q ss_pred CCceeEecCCCccHH----------HHHHHHHhcCC-----CCCceEEEeccccCCCCC-----CHHHHHHHHHhhhhCC
Q 026605 53 KSPVTICGDIHGQFH----------DLAELFQIGGK-----CPDTNYLFMGDYVDRGYY-----SVETVTLLVALKVRYP 112 (236)
Q Consensus 53 ~~~i~vigDIHG~~~----------~L~~ll~~~~~-----~~~~~~v~LGD~vdrG~~-----s~e~l~~l~~lk~~~p 112 (236)
+-.|+-++|+||++. .+..+++..+. .+..-++..||.+...+. ...+++++..+.
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g---- 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG---- 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----
Confidence 457999999999864 23344544431 233345558999864432 233556666553
Q ss_pred CCeEEEccCcccc
Q 026605 113 QRITILRGNHESR 125 (236)
Q Consensus 113 ~~v~~lrGNHE~~ 125 (236)
--.+..||||.-
T Consensus 110 -~Da~tlGNHEFD 121 (551)
T PRK09558 110 -YDAMAVGNHEFD 121 (551)
T ss_pred -CCEEcccccccC
Confidence 234455999973
No 128
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=82.98 E-value=5.7 Score=34.96 Aligned_cols=74 Identities=15% Similarity=0.299 Sum_probs=50.0
Q ss_pred CCceeEecCCC----ccHHHHHHHHHhcC-CCC----CceEEEeccccCCC----CCC----HHHHHHHHHh-hhhCC--
Q 026605 53 KSPVTICGDIH----GQFHDLAELFQIGG-KCP----DTNYLFMGDYVDRG----YYS----VETVTLLVAL-KVRYP-- 112 (236)
Q Consensus 53 ~~~i~vigDIH----G~~~~L~~ll~~~~-~~~----~~~~v~LGD~vdrG----~~s----~e~l~~l~~l-k~~~p-- 112 (236)
..+++|+||+| -.+++|.++|+... ..+ ...+|+.|+++... ..+ .+-++-|..+ ...+|
T Consensus 27 ~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L 106 (291)
T PTZ00235 27 RHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLI 106 (291)
T ss_pred ceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHH
Confidence 56899999999 55789999998773 212 45699999998653 222 2344444442 22333
Q ss_pred ---CCeEEEccCccccc
Q 026605 113 ---QRITILRGNHESRQ 126 (236)
Q Consensus 113 ---~~v~~lrGNHE~~~ 126 (236)
-++++|.|-.|-+.
T Consensus 107 ~~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 107 LEHCYLIFIPGINDPCA 123 (291)
T ss_pred HhcCeEEEECCCCCCCc
Confidence 47899999999854
No 129
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=81.10 E-value=1.7 Score=37.92 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=42.8
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCC-CCeEEEccCccccc
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYP-QRITILRGNHESRQ 126 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p-~~v~~lrGNHE~~~ 126 (236)
..+++.|+|.|+...+.. .-+..|.++-+||+-.-|. +.|+..+=..+- ..| ..-++|+||||...
T Consensus 61 ~~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~g-slph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 61 YARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLG-SLPHEYKIVIAGNHELTF 127 (305)
T ss_pred ceEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhc-cCcceeeEEEeeccceee
Confidence 358999999999766543 1356677788999876543 445554443331 223 23578999999854
No 130
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=80.72 E-value=0.45 Score=35.82 Aligned_cols=50 Identities=40% Similarity=0.642 Sum_probs=36.1
Q ss_pred ccccCcHHHHHHHhCCchhHHH---HHHHhccCcceEEECc-EEEEEeCCCccc
Q 026605 128 TQVYGFYDECLRKYGNANIWKI---FTDLFDYFPLTALSQK-YSVCMVGCPLQL 177 (236)
Q Consensus 128 ~~~~~f~~e~~~~~~~~~l~~~---~~~~~~~LP~~~~~~~-~~~~~hg~~~~~ 177 (236)
...+++..++...++....|.. ..++|+.+|+..+... .++|+||+.++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~ 57 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPG 57 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcc
Confidence 3345566665666654334555 9999999999998877 899999986653
No 131
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=72.15 E-value=33 Score=28.36 Aligned_cols=86 Identities=17% Similarity=0.208 Sum_probs=59.0
Q ss_pred ceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccccccCcHH----------------HHHHHhCCch
Q 026605 82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYD----------------ECLRKYGNAN 145 (236)
Q Consensus 82 ~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~~~~~f~~----------------e~~~~~~~~~ 145 (236)
..+|++|- |.+.-|.++++..++..|..+ .++.|+-|.+..++...|.. |..+.|- ..
T Consensus 40 ~~lVvlGS----GGHT~EMlrLl~~l~~~y~~r-~yI~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~l-tS 113 (211)
T KOG3339|consen 40 STLVVLGS----GGHTGEMLRLLEALQDLYSPR-SYIAADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWL-TS 113 (211)
T ss_pred eEEEEEcC----CCcHHHHHHHHHHHHhhcCce-EEEEecCchhhHHHHHhhhccccccchhheecchhhhhhhhhh-hh
Confidence 45888875 999999999999999888744 45589999998887665431 1122221 34
Q ss_pred hHHHHHHHhccCcceEEECcEEEEEeCC
Q 026605 146 IWKIFTDLFDYFPLTALSQKYSVCMVGC 173 (236)
Q Consensus 146 l~~~~~~~~~~LP~~~~~~~~~~~~hg~ 173 (236)
+|..+...+.++++...+.-.++.+-|+
T Consensus 114 v~Tti~all~s~~lv~RirPdlil~NGP 141 (211)
T KOG3339|consen 114 VFTTIWALLQSFVLVWRIRPDLILCNGP 141 (211)
T ss_pred HHHHHHHHHHHheEEEecCCCEEEECCC
Confidence 5666667777777777665555555553
No 132
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=69.03 E-value=5 Score=38.85 Aligned_cols=39 Identities=21% Similarity=0.409 Sum_probs=28.8
Q ss_pred HHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhc
Q 026605 38 KAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIG 76 (236)
Q Consensus 38 ~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~ 76 (236)
.+++++.-+..+.-.++.-.++|||||-+++|..+|+.+
T Consensus 17 ~~tEIINL~AIlnLPKGTEhF~SDlHGEyeAF~HiLrn~ 55 (640)
T PF06874_consen 17 ASTEIINLEAILNLPKGTEHFMSDLHGEYEAFDHILRNG 55 (640)
T ss_pred HHHHHHHHHHHhcCCCCceEeeeccccchHHHHHHHHcC
Confidence 344555444444445677899999999999999999754
No 133
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=68.15 E-value=14 Score=26.02 Aligned_cols=66 Identities=11% Similarity=0.043 Sum_probs=44.0
Q ss_pred ceeEecCCCccHHHHHHHHHhcCC--CCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEcc
Q 026605 55 PVTICGDIHGQFHDLAELFQIGGK--CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRG 120 (236)
Q Consensus 55 ~i~vigDIHG~~~~L~~ll~~~~~--~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrG 120 (236)
.+.||=|---|.+++.++++.+.. +....++++|++-+.|..+.+....+.++...+...+++...
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~ 80 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGD 80 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETS
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCC
Confidence 567888877788999998887753 345667889999998887777666666665555544444333
No 134
>KOG3425 consensus Uncharacterized conserved protein [Function unknown]
Probab=63.64 E-value=33 Score=26.23 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=41.8
Q ss_pred HHHHHHHHHhcCCCCCceEEEeccccCCCCCC-----HHHHHHHHHhhhhCCCCeEEE---ccCcccc
Q 026605 66 FHDLAELFQIGGKCPDTNYLFMGDYVDRGYYS-----VETVTLLVALKVRYPQRITIL---RGNHESR 125 (236)
Q Consensus 66 ~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s-----~e~l~~l~~lk~~~p~~v~~l---rGNHE~~ 125 (236)
+++|++.++..+....--++|+|+-.|++.+| +...-.+.+--...|..+++| -||-+.+
T Consensus 12 ~e~~~~~~~~~~n~~~ifvlF~gskd~~tGqSWCPdCV~AEPvi~~alk~ap~~~~~v~v~VG~rp~W 79 (128)
T KOG3425|consen 12 YESFEETLKNVENGKTIFVLFLGSKDDTTGQSWCPDCVAAEPVINEALKHAPEDVHFVHVYVGNRPYW 79 (128)
T ss_pred HHHHHHHHHHHhCCceEEEEEecccCCCCCCcCCchHHHhhHHHHHHHHhCCCceEEEEEEecCCCcc
Confidence 68899999988776667788999999987665 333334433333567776665 4777775
No 135
>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []. A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=53.43 E-value=61 Score=25.36 Aligned_cols=70 Identities=19% Similarity=0.301 Sum_probs=53.9
Q ss_pred CCceeEecCCCccH-HHHHHHHHhcC----CCCCceEEEeccccCCCCCCHHHHHHHHHhhhhC-CCCeEEEccCccccc
Q 026605 53 KSPVTICGDIHGQF-HDLAELFQIGG----KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRGNHESRQ 126 (236)
Q Consensus 53 ~~~i~vigDIHG~~-~~L~~ll~~~~----~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~-p~~v~~lrGNHE~~~ 126 (236)
..|+++|||--|=- .++++.++..+ +.....+||. .-|..-+|.=..++++..+| +.|+++|.|.-|...
T Consensus 5 gkKviiiGdRDGiPgpAie~c~~~~gaevvfs~TeCFVct----aagaMDLEnQ~rvk~~aEk~g~enlvVvlG~aeaE~ 80 (150)
T PF04723_consen 5 GKKVIIIGDRDGIPGPAIEECVKTAGAEVVFSSTECFVCT----AAGAMDLENQQRVKDLAEKYGAENLVVVLGAAEAEA 80 (150)
T ss_pred CcEEEEEecCCCCCcHHHHHHHHhcCceEEEEeeeEEEec----ccccccHHHHHHHHHHHHhcCCccEEEEecCCChhh
Confidence 46899999988865 78888888765 2333445553 45788899999999998887 589999999998753
No 136
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=51.68 E-value=46 Score=30.92 Aligned_cols=66 Identities=12% Similarity=0.090 Sum_probs=47.0
Q ss_pred CceeEecCCC-ccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhC-CCCeEEEcc
Q 026605 54 SPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRG 120 (236)
Q Consensus 54 ~~i~vigDIH-G~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~-p~~v~~lrG 120 (236)
..+.||=|-+ .|.++++++|+.+...+..+++.+||+..-|..+.+.-.-+-+..... .+.+++ -|
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~-~G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLS-VG 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEE-EC
Confidence 3578888854 468999999988765445678899999999999988776665554433 334443 36
No 137
>COG0770 MurF UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane]
Probab=50.21 E-value=62 Score=30.36 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=51.5
Q ss_pred CCceeEecC-CCccHHHHHHHHHhcCCCCCce-EEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccC
Q 026605 53 KSPVTICGD-IHGQFHDLAELFQIGGKCPDTN-YLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGN 121 (236)
Q Consensus 53 ~~~i~vigD-IHG~~~~L~~ll~~~~~~~~~~-~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGN 121 (236)
...+.+|-| .-+|.+.+.+.++.+...+..+ ++.|||+.--|.+|.++-+-+-+......-...++-|.
T Consensus 325 ~~g~~iIdD~YNAnp~sm~aai~~l~~~~~~~~i~VlGdM~ELG~~s~~~H~~v~~~~~~~~~d~v~~~G~ 395 (451)
T COG0770 325 ANGKTLIDDSYNANPDSMRAALDLLAALPGRKGIAVLGDMLELGEESEELHEEVGEYAVEAGIDLVFLVGE 395 (451)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHhhCccCCcEEEeCChhhhCccHHHHHHHHHHHHHhcCceEEEEEcc
Confidence 445678888 6899999999998877655555 89999999999999887776666544432245666677
No 138
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=48.61 E-value=9.1 Score=35.89 Aligned_cols=39 Identities=21% Similarity=0.387 Sum_probs=26.7
Q ss_pred HHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhc
Q 026605 38 KAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIG 76 (236)
Q Consensus 38 ~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~ 76 (236)
.|++|+.-+..+.-.++.=-++||+||.|+++..+|+..
T Consensus 22 ~~TEIINL~AIlnLPKgTEHF~SDvHGEYeaF~hVLrNg 60 (648)
T COG3855 22 VATEIINLQAILNLPKGTEHFMSDVHGEYEAFNHVLRNG 60 (648)
T ss_pred HHHHHhhHHHHhcCCcchhhhhhhhhchHHHHHHHHHcC
Confidence 345554444333333555678999999999999999754
No 139
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=47.92 E-value=29 Score=29.78 Aligned_cols=45 Identities=29% Similarity=0.461 Sum_probs=26.7
Q ss_pred CceEEEeccccCCCC----CCHHHHHHHHHhhh-------hCCCCeEEEccCcccc
Q 026605 81 DTNYLFMGDYVDRGY----YSVETVTLLVALKV-------RYPQRITILRGNHESR 125 (236)
Q Consensus 81 ~~~~v~LGD~vdrG~----~s~e~l~~l~~lk~-------~~p~~v~~lrGNHE~~ 125 (236)
....+||||-.+.-- .-.-++.+|..+.. +-.++|+++-||||.-
T Consensus 85 itpciflgdhtgdrfsti~gd~yiltllnsm~nme~nkdsrinknvvvlagnhein 140 (318)
T PF13258_consen 85 ITPCIFLGDHTGDRFSTIFGDQYILTLLNSMRNMEGNKDSRINKNVVVLAGNHEIN 140 (318)
T ss_pred cccceeecCcccchhhhhcchHHHHHHHHHHHhcccccccccccceEEEecCceec
Confidence 345778888653211 11235555555543 1235899999999985
No 140
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=46.97 E-value=17 Score=31.32 Aligned_cols=41 Identities=27% Similarity=0.305 Sum_probs=27.8
Q ss_pred eEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccc
Q 026605 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (236)
Q Consensus 83 ~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (236)
+++|+||+|++.-.. .+...|.+++.+++..+. --|=|...
T Consensus 1 ~ilfigdi~g~~G~~-~~~~~l~~lk~~~~~D~v--i~NgEn~~ 41 (255)
T cd07382 1 KILFIGDIVGKPGRK-AVKEHLPKLKKEYKIDFV--IANGENAA 41 (255)
T ss_pred CEEEEEeCCCHHHHH-HHHHHHHHHHHHCCCCEE--EECCcccc
Confidence 489999999875432 466777888877764444 44666653
No 141
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=46.01 E-value=16 Score=31.84 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=26.6
Q ss_pred eEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccc
Q 026605 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQ 126 (236)
Q Consensus 83 ~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~ 126 (236)
+++|+||+|++... .-+-..|.+++.+++.. ++-.|=|...
T Consensus 2 ~ilfiGDi~G~~Gr-~~l~~~L~~lk~~~~~D--~vIaNgEn~~ 42 (266)
T TIGR00282 2 KFLFIGDVYGKAGR-KIVKNNLPQLKSKYQAD--LVIANGENTT 42 (266)
T ss_pred eEEEEEecCCHHHH-HHHHHHHHHHHHhCCCC--EEEEcCcccC
Confidence 58999999965211 22446777787777634 4445777763
No 142
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=44.87 E-value=78 Score=27.37 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=41.0
Q ss_pred CceeEecCCCccH--HHHHHHHHhcCCC-CCceEEEeccccCCCCC-CHHHHHHHHHhhhhCCCCeEEEccCccc
Q 026605 54 SPVTICGDIHGQF--HDLAELFQIGGKC-PDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 54 ~~i~vigDIHG~~--~~L~~ll~~~~~~-~~~~~v~LGD~vdrG~~-s~e~l~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
||+.++||+=|.- .++..-|..+... ..|-++..|.-..-|.. ..+....+.+.- --++-.|||=.
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G-----~dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAG-----ADVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhC-----CCEEecccccc
Confidence 6888999998875 4555555554432 34556667777655543 455666666552 34567788854
No 143
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.79 E-value=15 Score=32.91 Aligned_cols=27 Identities=26% Similarity=0.389 Sum_probs=20.7
Q ss_pred hcCCccccCCceeEecCCC-ccHHHHHH
Q 026605 45 EESNVQPVKSPVTICGDIH-GQFHDLAE 71 (236)
Q Consensus 45 ~e~~~~~~~~~i~vigDIH-G~~~~L~~ 71 (236)
.-|-.++....++++||.| |||.++..
T Consensus 48 ~~p~~lp~~p~tw~cGD~HLgN~ga~~~ 75 (410)
T COG4320 48 TWPWSLPKTPFTWLCGDAHLGNFGAARN 75 (410)
T ss_pred cCccccCCCCceEEecccccccchhhcc
Confidence 3344667778899999999 88888653
No 144
>COG3207 DIT1 Pyoverdine/dityrosine biosynthesis protein [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.81 E-value=40 Score=29.47 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=33.9
Q ss_pred CccccCCceeEecCCC-------------ccH-HHHHHHHHhcCCCCCceEEEeccc
Q 026605 48 NVQPVKSPVTICGDIH-------------GQF-HDLAELFQIGGKCPDTNYLFMGDY 90 (236)
Q Consensus 48 ~~~~~~~~i~vigDIH-------------G~~-~~L~~ll~~~~~~~~~~~v~LGD~ 90 (236)
.+.+.+++|+|+||=| ..| ++|..+.+.++-+..++++++||+
T Consensus 100 ~~Y~PG~ki~I~SDghvFsD~I~Vdddh~s~Y~d~Lr~m~~~i~~~~i~kI~n~e~~ 156 (330)
T COG3207 100 LFYAPGAKITICSDGHVFSDLIRVDDDHISAYQDALRLMIEEIGATHIGKIFNLEDV 156 (330)
T ss_pred HhcCCCCEEEEEeCCceehhhccccchhHHHHHHHHHHHHHHcCCCCccceeecchh
Confidence 3566789999999876 223 567777788888899999999986
No 145
>PF06490 FleQ: Flagellar regulatory protein FleQ; InterPro: IPR010518 This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators that are involved in regulation of flagellar motility e.g. FleQ in Pseudomonas aeruginosa. It is clearly related to IPR001789 from INTERPRO, but lacks the conserved aspartate residue that undergoes phosphorylation in the classic two-component system response regulator (IPR001789 from INTERPRO).
Probab=42.16 E-value=96 Score=22.80 Aligned_cols=64 Identities=19% Similarity=0.268 Sum_probs=43.6
Q ss_pred ceeEecCCCccHHHHHHHHHhcCCCC-----------------CceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEE
Q 026605 55 PVTICGDIHGQFHDLAELFQIGGKCP-----------------DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITI 117 (236)
Q Consensus 55 ~i~vigDIHG~~~~L~~ll~~~~~~~-----------------~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~ 117 (236)
||.||.|=-.....|..+|+.+|... .-.+|.+|+.- .....+..+...+|.--++
T Consensus 1 kILvIddd~~R~~~L~~ILeFlGe~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-------~~~~~l~~l~~~~~~~Pvl 73 (109)
T PF06490_consen 1 KILVIDDDAERRQRLSTILEFLGEQCEAVSSSDWSQADWSSPWEACAVILGSCS-------KLAELLKELLKWAPHIPVL 73 (109)
T ss_pred CEEEECCcHHHHHhhhhhhhhcCCCeEEecHHHHHHhhhhcCCcEEEEEecCch-------hHHHHHHHHHhhCCCCCEE
Confidence 56777776666777888887766522 11244455542 6677777777778877788
Q ss_pred EccCcccc
Q 026605 118 LRGNHESR 125 (236)
Q Consensus 118 lrGNHE~~ 125 (236)
+.|+++..
T Consensus 74 llg~~~~~ 81 (109)
T PF06490_consen 74 LLGEHDSP 81 (109)
T ss_pred EECCCCcc
Confidence 99999887
No 146
>PTZ00126 tyrosyl-tRNA synthetase; Provisional
Probab=38.96 E-value=89 Score=28.67 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=59.1
Q ss_pred CCCCCCCCCccCHHHHHHHHhcCC--CCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCC-ccHHHHHH-HHHhcC
Q 026605 2 GANSLSTDTTTDLDEQISQLMQCK--PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIH-GQFHDLAE-LFQIGG 77 (236)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIH-G~~~~L~~-ll~~~~ 77 (236)
||..+|+.....+++-++.+.+.. .++++++..++++ ..+..+-.. +---|++| || ..+.. -+.++.
T Consensus 25 ~~~~~~~~~~~~~~e~~~~i~r~~~e~i~~eel~~~l~~------~~~~~v~~G--~~PTG~lHLG~-g~i~~~~~~~lq 95 (383)
T PTZ00126 25 GFRGSPPQSKLSLEERVKLCLSIGEECIQPEELRELLKL------KERPICYDG--FEPSGRMHIAQ-GILKAINVNKLT 95 (383)
T ss_pred hcccCCCCCCCCHHHHHHHHhcCceeecCHHHHHHHHhc------CCCCEEEEE--ECCCCcccccc-hHhHhHHHHHHH
Confidence 677888888888888888887663 5677777777531 122111111 22235666 65 22221 112222
Q ss_pred CCCCceEEEeccccCCC--C--CCHHHHHHH-----HHhhh--hCCCCeEEEccCc
Q 026605 78 KCPDTNYLFMGDYVDRG--Y--YSVETVTLL-----VALKV--RYPQRITILRGNH 122 (236)
Q Consensus 78 ~~~~~~~v~LGD~vdrG--~--~s~e~l~~l-----~~lk~--~~p~~v~~lrGNH 122 (236)
..+.+.+++++|+-..- + .+.+.+.-. ..++. .-|+++.++.+.+
T Consensus 96 ~~G~~v~~~IaD~hA~~~~~~g~~l~~i~~~~~~~~~~~~A~GlDp~k~~i~~qS~ 151 (383)
T PTZ00126 96 KAGCVFVFWVADWFALLNNKMGGDLEKIRKVGEYFIEVWKAAGMDMDNVRFLWASE 151 (383)
T ss_pred hCCCeEEEEEccceeecCCCCCCCHHHHHHHHHHHHHHHHHhCCCccceEEEECCh
Confidence 22456788899984331 1 223322221 11222 1467788888775
No 147
>PRK13265 glycine/sarcosine/betaine reductase complex protein A; Reviewed
Probab=37.51 E-value=1.5e+02 Score=23.23 Aligned_cols=70 Identities=17% Similarity=0.287 Sum_probs=52.6
Q ss_pred CCceeEecCCCccH-HHHHHHHHhcC----CCCCceEEEeccccCCCCCCHHHHHHHHHhhhhC-CCCeEEEccCccccc
Q 026605 53 KSPVTICGDIHGQF-HDLAELFQIGG----KCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRY-PQRITILRGNHESRQ 126 (236)
Q Consensus 53 ~~~i~vigDIHG~~-~~L~~ll~~~~----~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~-p~~v~~lrGNHE~~~ 126 (236)
..++++|||=-|-- .+.+..++..+ +.....+||. .-|..-+|.=..++++...| |.|+++|.|.-|...
T Consensus 6 gKkviiiGdRDGiPgpAie~c~k~~gaevvfs~TECfVct----aAGAMDLEnQ~Rvk~~aEk~g~eNvvVllGaaeaEa 81 (154)
T PRK13265 6 GKKVIIIGDRDGIPGPAIEECVKTTGAEVVFSSTECFVUT----AAGAMDLENQKRVKDLAEKFGAENVVVILGAAEAEA 81 (154)
T ss_pred CcEEEEEecCCCCCcHHHHHHHhccCceEEEEeeeEEEee----cccccchHHHHHHHHHHHhcCCccEEEEecccchhh
Confidence 56899999987764 67788887544 2334445554 45788889899999988877 589999999998854
No 148
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=37.38 E-value=1.1e+02 Score=27.93 Aligned_cols=69 Identities=17% Similarity=0.235 Sum_probs=44.7
Q ss_pred CceeEecCCC-ccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCc
Q 026605 54 SPVTICGDIH-GQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNH 122 (236)
Q Consensus 54 ~~i~vigDIH-G~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNH 122 (236)
..+.+|=|-+ .|.++++++|+.+...+...++++|++..-|..+.+.-..+.+......-...++-|..
T Consensus 296 ~~~~vidDsya~np~s~~~al~~l~~~~~r~i~VlG~~~e~G~~~~~~~~~l~~~~~~~~~d~vi~~g~~ 365 (417)
T TIGR01143 296 NGLTLIDDTYNANPDSMRAALDALARFPGKKILVLGDMAELGEYSEELHAEVGRYANSLGIDLVFLVGEE 365 (417)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEEcCchhcChHHHHHHHHHHHHHHHcCCCEEEEECHH
Confidence 3577888855 48999999998876443456888999987788776555554444333331233444543
No 149
>COG1060 ThiH Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]
Probab=37.37 E-value=66 Score=29.40 Aligned_cols=111 Identities=18% Similarity=0.120 Sum_probs=58.6
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHH-HHHHhhcC---C-ccccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEec
Q 026605 14 LDEQISQLMQCKPLSEPQVKALCEKA-KEILMEES---N-VQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMG 88 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~e~---~-~~~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LG 88 (236)
++.++++..++..++.++...|+..+ ...+.+-. . .......+.++-+.+=++..+-.. ...+....+- -|
T Consensus 8 ~~~~~e~a~~~~~l~~~d~~~Ll~~~~~~~l~~~A~~~r~~~~~~~~vtyv~n~~in~TN~C~~--~C~fCaF~~~--~~ 83 (370)
T COG1060 8 VDEIVEKALNGERLTREDALALLSPADLEELEELADKARRRKRVGDGVTYVVNRNINYTNICVN--DCTFCAFYRK--PG 83 (370)
T ss_pred HHHHHHHHhccCCCCHHHHHHHhccCcHHHHHHHHHHHHHhhccCCcEEEEEeecCCcchhhcC--CCCccccccC--CC
Confidence 89999999999999999999888754 11111111 1 222233455666665555543221 1111000000 01
Q ss_pred cccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCccccccc
Q 026605 89 DYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQIT 128 (236)
Q Consensus 89 D~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~~~~ 128 (236)
|==.+--.+.|+.+.+.+....=-..++++-|-|-.....
T Consensus 84 ~~~~y~Ls~eeI~~~~~~~~~~G~~Evli~gG~~p~~~~~ 123 (370)
T COG1060 84 DPKAYTLSPEEILEEVREAVKRGITEVLIVGGEHPELSLE 123 (370)
T ss_pred CccccccCHHHHHHHHHHHHHcCCeEEEEecCcCCCcchH
Confidence 1100111345677777776554234678888887776554
No 150
>PRK05564 DNA polymerase III subunit delta'; Validated
Probab=33.15 E-value=1.6e+02 Score=25.77 Aligned_cols=58 Identities=9% Similarity=0.135 Sum_probs=39.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCc-cHHHHHHHHHhcCCCCCceEEEe
Q 026605 24 CKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLFM 87 (236)
Q Consensus 24 ~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG-~~~~L~~ll~~~~~~~~~~~v~L 87 (236)
+..++-++++++++.+.. .| ..-+.|++||-|.|. +-.+..++|+.++.++...++++
T Consensus 70 ~~~i~v~~ir~~~~~~~~----~p--~~~~~kv~iI~~ad~m~~~a~naLLK~LEepp~~t~~il 128 (313)
T PRK05564 70 KKSIGVDDIRNIIEEVNK----KP--YEGDKKVIIIYNSEKMTEQAQNAFLKTIEEPPKGVFIIL 128 (313)
T ss_pred CCCCCHHHHHHHHHHHhc----Cc--ccCCceEEEEechhhcCHHHHHHHHHHhcCCCCCeEEEE
Confidence 344666777777765533 22 223679999999877 55677788888888777665554
No 151
>PF14164 YqzH: YqzH-like protein
Probab=30.58 E-value=1.1e+02 Score=20.73 Aligned_cols=37 Identities=27% Similarity=0.530 Sum_probs=28.6
Q ss_pred cCHHHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHhhcCC
Q 026605 12 TDLDEQISQLM-------QCKPLSEPQVKALCEKAKEILMEESN 48 (236)
Q Consensus 12 ~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~~e~~ 48 (236)
..|++++.+-+ .+.|++..|...|++.....-.++|.
T Consensus 4 k~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 4 KLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred HHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 44666666654 34589999999999999988888876
No 152
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=30.02 E-value=76 Score=27.44 Aligned_cols=40 Identities=30% Similarity=0.395 Sum_probs=27.0
Q ss_pred eEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcccc
Q 026605 83 NYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESR 125 (236)
Q Consensus 83 ~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE~~ 125 (236)
+++|+||+|++-. -..+-+.|-.+|..|.-.+.++ |-|..
T Consensus 2 riLfiGDvvGk~G-r~~v~~~Lp~lk~kyk~dfvI~--N~ENa 41 (266)
T COG1692 2 RILFIGDVVGKPG-RKAVKEHLPQLKSKYKIDFVIV--NGENA 41 (266)
T ss_pred eEEEEecccCcch-HHHHHHHhHHHHHhhcCcEEEE--cCccc
Confidence 6899999998632 2446677888888875455555 44443
No 153
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=28.38 E-value=4.5e+02 Score=25.12 Aligned_cols=76 Identities=16% Similarity=0.266 Sum_probs=44.6
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecC--CCccHHHHHHHHHhcCCCCCceEEE--eccccCCCCCCH
Q 026605 23 QCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGD--IHGQFHDLAELFQIGGKCPDTNYLF--MGDYVDRGYYSV 98 (236)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigD--IHG~~~~L~~ll~~~~~~~~~~~v~--LGD~vdrG~~s~ 98 (236)
.+.....+.+.++++.+++ .... +.+ +-.+|| +|++.+-|.++++.+...+..++++ ..|==|-.|.|
T Consensus 85 ~g~~~~n~~l~~~~~~~~~---~~~~-lHl---~GL~SdGgVHsh~~hl~~l~~~a~~~g~~~v~vH~~~DGRD~~p~s- 156 (501)
T TIGR01307 85 DGEFFANPALLGAIDRAKD---NNGK-LHL---MGLVSDGGVHSHIDHLIALIELAAERGIEKVVLHAFTDGRDTAPKS- 156 (501)
T ss_pred cCCcccCHHHHHHHHHHHh---cCCc-eEE---EEeccCCCCcchHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCchh-
Confidence 4444455566677777652 2222 222 345666 9999999999999888776644332 66644444443
Q ss_pred HHHHHHHHh
Q 026605 99 ETVTLLVAL 107 (236)
Q Consensus 99 e~l~~l~~l 107 (236)
.+.+|.++
T Consensus 157 -~~~~~~~l 164 (501)
T TIGR01307 157 -AESYLEQL 164 (501)
T ss_pred -HHHHHHHH
Confidence 34444444
No 154
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=28.17 E-value=3e+02 Score=21.80 Aligned_cols=52 Identities=23% Similarity=0.367 Sum_probs=36.2
Q ss_pred eEecCCCccHHHHHHHHHh-cCC------------CCCceEEEeccccCCCCCCHHHHHHHHHhh
Q 026605 57 TICGDIHGQFHDLAELFQI-GGK------------CPDTNYLFMGDYVDRGYYSVETVTLLVALK 108 (236)
Q Consensus 57 ~vigDIHG~~~~L~~ll~~-~~~------------~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk 108 (236)
++.+=.+||-..+...+.. ++. ...-.+||+|=-+|+|.-+.++.++|..++
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~ 66 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK 66 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc
Confidence 3444467776666444432 221 123469999999999999999999999985
No 155
>TIGR01143 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase. This family consists of the strictly bacterial MurF gene of peptidoglycan biosynthesis. This enzyme is almost always UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase, but in a few species, MurE adds lysine rather than diaminopimelate. This enzyme acts on the product from MurE activity, and so is also subfamily rather than equivalog. Staphylococcus aureus is an example of species in this MurF protein would differ.
Probab=28.01 E-value=3.3e+02 Score=24.78 Aligned_cols=67 Identities=12% Similarity=0.242 Sum_probs=39.5
Q ss_pred CceeEecCCC--ccHHH-----HHHHHHhcCCCCCceEEEecccc-------CC-C---CCCHHHHHHHHHhhhhCCCCe
Q 026605 54 SPVTICGDIH--GQFHD-----LAELFQIGGKCPDTNYLFMGDYV-------DR-G---YYSVETVTLLVALKVRYPQRI 115 (236)
Q Consensus 54 ~~i~vigDIH--G~~~~-----L~~ll~~~~~~~~~~~v~LGD~v-------dr-G---~~s~e~l~~l~~lk~~~p~~v 115 (236)
.+++|+|+.- |+++. +.+.+. ....+.+++.||-- .. . ....++++.+... ..|+.+
T Consensus 325 r~i~VlG~~~e~G~~~~~~~~~l~~~~~---~~~~d~vi~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~d~ 399 (417)
T TIGR01143 325 KKILVLGDMAELGEYSEELHAEVGRYAN---SLGIDLVFLVGEEAAVIYDSLGCKGFHFADKDELLAFLKLE--LGEGDV 399 (417)
T ss_pred CEEEEEcCchhcChHHHHHHHHHHHHHH---HcCCCEEEEECHHHHHHHHhcccCcEEECCHHHHHHHHHHh--cCCCCE
Confidence 4799999984 77765 333333 23357888999842 11 1 1223344444432 346678
Q ss_pred EEEccCcccc
Q 026605 116 TILRGNHESR 125 (236)
Q Consensus 116 ~~lrGNHE~~ 125 (236)
++++|.+-..
T Consensus 400 VLlkGSr~~~ 409 (417)
T TIGR01143 400 VLVKGSRSVK 409 (417)
T ss_pred EEEEeCCcCc
Confidence 8888877654
No 156
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=26.90 E-value=48 Score=25.15 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=33.1
Q ss_pred ceeEecCCCccHHHHHHHH----------------------HhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhh
Q 026605 55 PVTICGDIHGQFHDLAELF----------------------QIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALK 108 (236)
Q Consensus 55 ~i~vigDIHG~~~~L~~ll----------------------~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk 108 (236)
|-++|||...--....+.+ +.+...+.+.++++|-.-+|-.+.+..+.++...+
T Consensus 37 Pd~iiGDfDSi~~~~~~~~~~~~~~~~~~p~kD~TD~e~Al~~~~~~~~~~i~v~Ga~GgR~DH~lanl~~l~~~~ 112 (123)
T PF04263_consen 37 PDLIIGDFDSISPEVLEFYKSKGVEIIHFPEKDYTDLEKALEYAIEQGPDEIIVLGALGGRFDHTLANLNLLYKYK 112 (123)
T ss_dssp -SEEEC-SSSS-HHHHHHHHHCTTEEEEE-STTS-HHHHHHHHHHHTTTSEEEEES-SSSSHHHHHHHHHHHHHHH
T ss_pred CCEEEecCCCCChHHHHHHHhhccceecccccccCHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHHHHHHHHH
Confidence 5567777766555544444 33333445578888888888778888787777765
No 157
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=26.17 E-value=2.1e+02 Score=24.72 Aligned_cols=63 Identities=19% Similarity=0.116 Sum_probs=39.0
Q ss_pred eEecCCCccH--HHHHHHHHhcCC-CCCceEEEeccccCCCCC-CHHHHHHHHHhhhhCCCCeEEEccCccc
Q 026605 57 TICGDIHGQF--HDLAELFQIGGK-CPDTNYLFMGDYVDRGYY-SVETVTLLVALKVRYPQRITILRGNHES 124 (236)
Q Consensus 57 ~vigDIHG~~--~~L~~ll~~~~~-~~~~~~v~LGD~vdrG~~-s~e~l~~l~~lk~~~p~~v~~lrGNHE~ 124 (236)
.+||||=|.- .++.+.|..+.. -..|-+|..|.-...|.- +.+..+.|+++- =-++-.|||=.
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git~~~~~~L~~~G-----vDviT~GNH~w 67 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFGITPKIAEELFKAG-----VDVITMGNHIW 67 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS--HHHHHHHHHHT------SEEE--TTTT
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCCCCHHHHHHHHhcC-----CCEEecCcccc
Confidence 4789999986 677777877654 356778889998876653 556777777662 13566799955
No 158
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=24.77 E-value=1.5e+02 Score=28.76 Aligned_cols=64 Identities=19% Similarity=0.187 Sum_probs=39.1
Q ss_pred HHHHHHHHhcCCC--CCceEEEecccc--CCCCCCHH----HHHHHHHh-hhhCC-CCeEEEccCccccccccc
Q 026605 67 HDLAELFQIGGKC--PDTNYLFMGDYV--DRGYYSVE----TVTLLVAL-KVRYP-QRITILRGNHESRQITQV 130 (236)
Q Consensus 67 ~~L~~ll~~~~~~--~~~~~v~LGD~v--drG~~s~e----~l~~l~~l-k~~~p-~~v~~lrGNHE~~~~~~~ 130 (236)
..++.+|+.++.. ..|-++..||++ |+++...+ ++..+.++ .+-+| -.|+...||||-.-.|..
T Consensus 195 ~lies~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F 268 (577)
T KOG3770|consen 195 RLIESALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLF 268 (577)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhc
Confidence 4566677766543 256788899998 45555433 33333222 22345 247889999999766643
No 159
>PRK05434 phosphoglyceromutase; Provisional
Probab=24.63 E-value=4.6e+02 Score=25.08 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=50.1
Q ss_pred cCCCCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecC--CCccHHHHHHHHHhcCCCCCceEEE--eccccCCCCCCH
Q 026605 23 QCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGD--IHGQFHDLAELFQIGGKCPDTNYLF--MGDYVDRGYYSV 98 (236)
Q Consensus 23 ~~~~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigD--IHG~~~~L~~ll~~~~~~~~~~~v~--LGD~vdrG~~s~ 98 (236)
.+...+.+.+.++++.+++ ....+.+ +-.+|| +|++.+-|.++++.+...+..++++ +.|==|-.|.|
T Consensus 89 ~g~~~~n~~~~~~~~~~~~----~~~~lHl---~GL~SdggVHsh~~hl~~l~~~a~~~g~~~v~vH~~~DGRD~~p~s- 160 (507)
T PRK05434 89 DGSFFENPALLDAIDKAKK----NGGALHL---MGLLSDGGVHSHIDHLFALLELAKEEGVKKVYVHAFLDGRDTPPKS- 160 (507)
T ss_pred cCCcccCHHHHHHHHHHHh----cCCeEEE---EEeccCCCcccHHHHHHHHHHHHHHcCCCEEEEEEecCCCCCCchh-
Confidence 3333444555666666642 2222222 345666 9999999999999888776644332 67744444444
Q ss_pred HHHHHHHHhhhh---CC-CCeEEEccCc
Q 026605 99 ETVTLLVALKVR---YP-QRITILRGNH 122 (236)
Q Consensus 99 e~l~~l~~lk~~---~p-~~v~~lrGNH 122 (236)
.+.+|.++... .. +++-.+-|-.
T Consensus 161 -~~~~i~~l~~~~~~~~~~~iasv~GRy 187 (507)
T PRK05434 161 -ALGYLEELEAKLAELGVGRIASVSGRY 187 (507)
T ss_pred -HHHHHHHHHHHHHHhCCeeEEEEeccc
Confidence 34444433221 11 3555666643
No 160
>PF12982 DUF3866: Protein of unknown function (DUF3866); InterPro: IPR024479 This family of proteins is currently functionally uncharacterised.
Probab=24.21 E-value=2.4e+02 Score=25.21 Aligned_cols=56 Identities=14% Similarity=0.275 Sum_probs=41.0
Q ss_pred ccCCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhh
Q 026605 51 PVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVR 110 (236)
Q Consensus 51 ~~~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~ 110 (236)
.++..-+||+|+|+.+..+.+.++... +.-++++. +-|.|.-|+..=+.+..||..
T Consensus 86 sL~G~PVvV~~LHS~Lp~~~a~~k~~~--p~~riaYI--MtDggALP~~fS~~v~~Lk~~ 141 (320)
T PF12982_consen 86 SLDGMPVVVAELHSMLPPIAAGLKALR--PDARIAYI--MTDGGALPLAFSRTVAELKEK 141 (320)
T ss_pred CCCCCEEEEEechhhHHHHHHHHHHhC--CCCeEEEE--EeCCcCccHHHHHHHHHHHhC
Confidence 345556799999999999999998875 33444443 448888888877777777654
No 161
>PRK11929 putative bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase; Provisional
Probab=24.09 E-value=2.4e+02 Score=28.96 Aligned_cols=70 Identities=13% Similarity=0.114 Sum_probs=44.6
Q ss_pred CceeEecCCC-ccHHHHHHHHHhcCCCC-CceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 54 SPVTICGDIH-GQFHDLAELFQIGGKCP-DTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 54 ~~i~vigDIH-G~~~~L~~ll~~~~~~~-~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
..+.+|=|-+ -|.++++++|+.+.... ...++.+|++-+.|..+.+.-..+-+..........++-|..-
T Consensus 834 ~~~~iidDsya~np~s~~aaL~~l~~~~~~~~i~VlG~~~e~g~~~~~~h~~~g~~~~~~~~~~vi~~Ge~~ 905 (958)
T PRK11929 834 CGTRIIDDTYNANPDSMRAAIDVLAELPNGPRALVLGDMLELGDNGPAMHREVGKYARQLGIDALITLGEAA 905 (958)
T ss_pred CCcEEEEcCCCCCHHHHHHHHHHHHhccCCCEEEEECCchhcCcHHHHHHHHHHHHHHHcCCCEEEEECcCH
Confidence 4577888966 47899999998876433 4578889999998888876543333332222223444446443
No 162
>PRK14093 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase; Provisional
Probab=23.28 E-value=2.8e+02 Score=25.87 Aligned_cols=66 Identities=14% Similarity=0.135 Sum_probs=45.6
Q ss_pred CceeEecC-CCccHHHHHHHHHhcCCC----CCceEEEeccccCCCCCCHHHHHHHHHhhh-hCCCCeEEEcc
Q 026605 54 SPVTICGD-IHGQFHDLAELFQIGGKC----PDTNYLFMGDYVDRGYYSVETVTLLVALKV-RYPQRITILRG 120 (236)
Q Consensus 54 ~~i~vigD-IHG~~~~L~~ll~~~~~~----~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~-~~p~~v~~lrG 120 (236)
..+.+|=| -=.|.+++++.|+.+... +...++++||+..+|..+.+...-+-+... ...+.++++ |
T Consensus 337 ~~~~iIDDsYahnP~s~~aaL~~l~~~~~~~~~r~i~V~G~m~elg~~~~~~h~~~~~~~~~~~~d~v~~~-G 408 (479)
T PRK14093 337 GEATLIDESYNANPASMAAALGVLGRAPVGPQGRRIAVLGDMLELGPRGPELHRGLAEAIRANAIDLVFCC-G 408 (479)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhhccCCCCEEEEECChHHcCcHHHHHHHHHHHHHHHcCCCEEEEE-c
Confidence 34778888 455889999999887653 345688899999999998876655544432 223445444 5
No 163
>PRK14838 undecaprenyl pyrophosphate synthase; Provisional
Probab=22.95 E-value=1.1e+02 Score=26.24 Aligned_cols=49 Identities=20% Similarity=0.164 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCccHHHHHHHHHhcC
Q 026605 28 SEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77 (236)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~ 77 (236)
|++|+..|+.-..+.+.++. +.+.+.++.+|||+--=-+++++.++.+.
T Consensus 71 ~~~Ev~~Lm~l~~~~l~~~~-~~~~~irir~iG~~~~Lp~~l~~~i~~~e 119 (242)
T PRK14838 71 PSDEVAALMSLLLDSIEEET-FMKNNIRFRIIGDIAKLPEEVQERLNECE 119 (242)
T ss_pred CHHHHHHHHHHHHHHHHHHH-HHHcCcEEEEEeChhhCCHHHHHHHHHHH
Confidence 56788888888887776653 55567899999998654467777775544
No 164
>PF02885 Glycos_trans_3N: Glycosyl transferase family, helical bundle domain Prosite entry for Thymidine and pyrimidine-nucleoside phosphorylases; InterPro: IPR017459 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. The glycosyl transferase family includes anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase (2.4.2.2 from EC) catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism. This N-terminal domain is found in various family 3 glycosyl transferases, including anthranilate phosphoribosyltransferase (TrpD, 2.4.2.18 from EC) and thymidine phosphorylase (2.4.2.2 from EC). All these proteins can transfer a phosphorylated ribose substrate. Thymidine phosphorylase catalyses the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate. This enzyme regulates the availability of thymidine and is therefore essential to nucleic acid metabolism.; PDB: 2DSJ_B 2ELC_B 2BPQ_A 1ZVW_B 3QR9_B 1V8G_B 2WK5_C 2J0F_C 2WK6_B 1UOU_A ....
Probab=22.94 E-value=1.3e+02 Score=19.80 Aligned_cols=26 Identities=23% Similarity=0.311 Sum_probs=17.5
Q ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHH
Q 026605 14 LDEQISQLMQCKPLSEPQVKALCEKA 39 (236)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 39 (236)
+.++++++.++..++.+++..++...
T Consensus 2 ~~~~l~~l~~g~~Ls~~e~~~~~~~i 27 (66)
T PF02885_consen 2 IKEILKKLRDGEDLSREEAKAAFDAI 27 (66)
T ss_dssp HHHHHHHHHTT----HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCHHHHHHHHHHH
Confidence 56789999999999999988877643
No 165
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=22.08 E-value=4e+02 Score=21.02 Aligned_cols=68 Identities=13% Similarity=0.077 Sum_probs=40.0
Q ss_pred CCceeEecCCCccHHHHHHHHHhcCCCCCceEEEeccccCCCCCCHHHHHHHHHhhhhCCCCeEEEccCcc
Q 026605 53 KSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHE 123 (236)
Q Consensus 53 ~~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~~~p~~v~~lrGNHE 123 (236)
+-+++|++. |+...+...++..+....-..++..|-+..+.-..+++..+.+.....|.++.+| |.+.
T Consensus 108 g~~~~i~Sn--~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v-gD~~ 175 (198)
T TIGR01428 108 GYRLAILSN--GSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV-ASNP 175 (198)
T ss_pred CCeEEEEeC--CCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE-eCCH
Confidence 357899988 5667777888887754332345555555555444566665554433446555544 4443
No 166
>PF13788 DUF4180: Domain of unknown function (DUF4180)
Probab=21.66 E-value=1.6e+02 Score=22.24 Aligned_cols=35 Identities=17% Similarity=0.372 Sum_probs=19.5
Q ss_pred CCceeEecCCCcc--HHHHHHHHHhcCCCCCceEEEecc
Q 026605 53 KSPVTICGDIHGQ--FHDLAELFQIGGKCPDTNYLFMGD 89 (236)
Q Consensus 53 ~~~i~vigDIHG~--~~~L~~ll~~~~~~~~~~~v~LGD 89 (236)
.+|++||||+-+. -.+|....... .....+.|+.|
T Consensus 69 ~iklAivGD~s~~~~S~~l~dfi~Es--N~G~~~~F~~~ 105 (113)
T PF13788_consen 69 RIKLAIVGDFSAYATSKSLRDFIYES--NRGNHFFFVPD 105 (113)
T ss_pred ceeEEEEEcccccccchhHHHHHHHh--cCCCeEEEECC
Confidence 5678888887554 34444444333 22344666655
No 167
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.95 E-value=47 Score=22.99 Aligned_cols=22 Identities=27% Similarity=0.452 Sum_probs=19.5
Q ss_pred cccCCCCCCHHHHHHHHHhhhh
Q 026605 89 DYVDRGYYSVETVTLLVALKVR 110 (236)
Q Consensus 89 D~vdrG~~s~e~l~~l~~lk~~ 110 (236)
|++++|-+|+.++.++..++.+
T Consensus 23 NLi~~GLDSiR~M~L~~~wR~~ 44 (74)
T COG3433 23 NLIDYGLDSIRMMALLERWRKR 44 (74)
T ss_pred hHHHhchhHHHHHHHHHHHHHc
Confidence 5889999999999999999754
No 168
>PRK05707 DNA polymerase III subunit delta'; Validated
Probab=20.81 E-value=3.4e+02 Score=24.20 Aligned_cols=55 Identities=13% Similarity=0.069 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHHHHHHHHhhcCCccccCCceeEecCCCc-cHHHHHHHHHhcCCCCCceEEE
Q 026605 26 PLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHG-QFHDLAELFQIGGKCPDTNYLF 86 (236)
Q Consensus 26 ~~~~~~~~~l~~~~~~~~~~e~~~~~~~~~i~vigDIHG-~~~~L~~ll~~~~~~~~~~~v~ 86 (236)
.+.-++++++.+.+... | .+-+.||+||-+.|. +..+-.++|+.++.++...+++
T Consensus 85 ~i~id~iR~l~~~~~~~----~--~~~~~kv~iI~~a~~m~~~aaNaLLK~LEEPp~~~~fi 140 (328)
T PRK05707 85 TIKVDQVRELVSFVVQT----A--QLGGRKVVLIEPAEAMNRNAANALLKSLEEPSGDTVLL 140 (328)
T ss_pred CCCHHHHHHHHHHHhhc----c--ccCCCeEEEECChhhCCHHHHHHHHHHHhCCCCCeEEE
Confidence 46667777776555432 1 123568999999988 6678888888888776654433
No 169
>KOG1602 consensus Cis-prenyltransferase [Lipid transport and metabolism]
Probab=20.71 E-value=1.6e+02 Score=25.60 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHHHHHhh----cCCccccCCceeEecCCCccHHHHHHHHHhcC
Q 026605 28 SEPQVKALCEKAKEILME----ESNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77 (236)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~----e~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~ 77 (236)
+++|+..|..-+.+.+.+ ...+-..+.||.|+||++==-.+|++.+.++.
T Consensus 97 s~eEVd~LM~L~~~k~~~~~~~~~~~~~~gvririiGdlslL~~~l~k~i~~ie 150 (271)
T KOG1602|consen 97 SPEEVDGLMDLALEKIERLLEQGEKLDKYGVRIRVIGDLSLLPESLRKAIKKIE 150 (271)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhhhhcCeEEEEEcchhhCCHHHHHHHHHHH
Confidence 566777666666554433 33444567899999999987788887776654
No 170
>TIGR01201 HU_rel DNA-binding protein, histone-like, putative. This model describes a set of proteins related to but longer than DNA-binding protein HU. Its distinctive domain architecture compared to HU and related histone-like DNA-binding proteins justifies the designation as superfamily. Members include, so far, one from Bacteroides fragilis, a gut bacterium, and ten from Porphyromonas gingivalis, an oral anaerobe.
Probab=20.25 E-value=1.9e+02 Score=22.48 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=26.1
Q ss_pred ccCHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHhh
Q 026605 11 TTDLDEQISQLMQCKPLSEPQVKALCEKAKEILME 45 (236)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 45 (236)
....+++++.+.+...++..++..+++...+++..
T Consensus 30 ~mt~~el~~~Ia~~s~~s~~dv~~vl~~l~~~i~~ 64 (145)
T TIGR01201 30 VIDFEEIAELIAEESSLSPGDVKGIIDRLAYVLRR 64 (145)
T ss_pred CcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 45677888888777778888888777777666644
No 171
>PTZ00349 dehydrodolichyl diphosphate synthetase; Provisional
Probab=20.08 E-value=1.2e+02 Score=27.20 Aligned_cols=50 Identities=16% Similarity=0.116 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHHHHhhc----CCccccCCceeEecCCCccHHHHHHHHHhcC
Q 026605 28 SEPQVKALCEKAKEILMEE----SNVQPVKSPVTICGDIHGQFHDLAELFQIGG 77 (236)
Q Consensus 28 ~~~~~~~l~~~~~~~~~~e----~~~~~~~~~i~vigDIHG~~~~L~~ll~~~~ 77 (236)
+++|+..|++-..+.+.++ +.+.+.+.++.++||+-.=-+++++.++.+.
T Consensus 80 p~~EV~~Lm~L~~~~l~~~~~~~~~l~~~~irirviGd~~~Lp~~l~~~i~~~e 133 (322)
T PTZ00349 80 SPEEIHFLFYLNLLILINEDFFFKFIKDNKIKIKIIGNLSYINDAYRKIIHDIE 133 (322)
T ss_pred CHHHHHHHHHHHHHHHHHhhhhHHHHHHCCCEEEEEeChhhCCHHHHHHHHHHH
Confidence 5778888887777766665 3344567899999998765678888876654
No 172
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=20.07 E-value=6.7e+02 Score=22.82 Aligned_cols=103 Identities=15% Similarity=0.106 Sum_probs=59.2
Q ss_pred CCCCCCccCHHHHHHHHhcCCCCCHHHHHH----HHHHHHHHHhhcCCcc---ccCCceeEec--CCCccHHHHHHHHHh
Q 026605 5 SLSTDTTTDLDEQISQLMQCKPLSEPQVKA----LCEKAKEILMEESNVQ---PVKSPVTICG--DIHGQFHDLAELFQI 75 (236)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~~~~e~~~~---~~~~~i~vig--DIHG~~~~L~~ll~~ 75 (236)
++|-.+...++++-+.+..-..++++++.+ +|+++.-+-.+...-+ +-+.|+-+.| =|=++.++++++++.
T Consensus 153 ~lPg~~~~~~~~~~~~l~~y~~i~~e~lw~nl~yFL~~v~PvAEe~gV~laiHPDDPP~~~~GlpRi~~~~e~~~~~~~~ 232 (351)
T PF03786_consen 153 TLPGWEEEYLEEFRELLAAYGGIDEEQLWENLKYFLEAVIPVAEEAGVKLAIHPDDPPWPLFGLPRIVSTAEDLKRILDL 232 (351)
T ss_dssp ------CCCHHHHHHHHHHCCT--HHHHHHHHHHHHHHHHHHHHHCT-EEEEE--SSSS-BTTB---TTSHHHHHHHHHC
T ss_pred CCCCCChHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhHHHHHhCCEEEeCCCCCCCccCCCCcccCCHHHHHHHHHh
Confidence 356666666888888888888899887754 4555554544444322 2233433222 244889999999999
Q ss_pred cCCCCCceEEEeccccCCCCCCHHHHHHHHHhhh
Q 026605 76 GGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKV 109 (236)
Q Consensus 76 ~~~~~~~~~v~LGD~vdrG~~s~e~l~~l~~lk~ 109 (236)
...+.+.--+|.|-+--++. ..+...++.+..
T Consensus 233 ~~Sp~nGltfC~Gs~g~~~~--ndl~~~ir~f~~ 264 (351)
T PF03786_consen 233 VDSPANGLTFCTGSLGAMPD--NDLPEMIREFGE 264 (351)
T ss_dssp T-STTEEEEEECCHHHCSTT--S-HHHHHHHCHH
T ss_pred CCCccccEEeecCccccCCC--CCHHHHHHHHhc
Confidence 87777788899999965543 345666666544
Done!