Query 026609
Match_columns 236
No_of_seqs 122 out of 1705
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 10:15:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026609.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026609hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 2.4E-44 5.2E-49 302.9 22.1 226 8-236 220-445 (537)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 4.7E-42 1E-46 287.7 20.0 223 6-236 206-433 (528)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 2.8E-41 6.1E-46 290.2 21.1 229 6-236 205-438 (534)
4 KOG1177 Long chain fatty acid 100.0 8.5E-42 1.8E-46 273.3 15.9 228 7-236 269-498 (596)
5 PRK06334 long chain fatty acid 100.0 2.5E-40 5.4E-45 285.1 22.2 229 6-236 217-447 (539)
6 PLN02574 4-coumarate--CoA liga 100.0 4.3E-39 9.4E-44 278.7 23.1 225 11-236 242-467 (560)
7 PLN02654 acetate-CoA ligase 100.0 6.9E-39 1.5E-43 282.0 20.8 229 6-236 310-550 (666)
8 PLN02246 4-coumarate--CoA liga 100.0 6.6E-38 1.4E-42 270.1 23.5 229 7-236 218-449 (537)
9 PF00501 AMP-binding: AMP-bind 100.0 9.5E-39 2.1E-43 267.2 16.1 214 14-228 197-417 (417)
10 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.1E-37 2.4E-42 273.2 21.6 228 7-236 272-512 (625)
11 PLN02614 long-chain acyl-CoA s 100.0 4.2E-38 9.1E-43 276.8 19.0 222 9-236 265-534 (666)
12 PRK07788 acyl-CoA synthetase; 100.0 1.2E-37 2.7E-42 269.1 21.1 222 6-236 241-464 (549)
13 PLN02860 o-succinylbenzoate-Co 100.0 1.1E-37 2.5E-42 270.0 20.7 223 6-236 206-451 (563)
14 TIGR02316 propion_prpE propion 100.0 1.6E-37 3.4E-42 272.2 21.5 229 6-236 267-509 (628)
15 PTZ00342 acyl-CoA synthetase; 100.0 1.3E-37 2.7E-42 274.6 20.3 220 11-236 345-608 (746)
16 PTZ00237 acetyl-CoA synthetase 100.0 1.4E-37 3.1E-42 272.9 20.2 224 8-236 291-529 (647)
17 PRK13295 cyclohexanecarboxylat 100.0 5.5E-37 1.2E-41 264.9 22.9 225 7-236 232-456 (547)
18 PRK00174 acetyl-CoA synthetase 100.0 4E-37 8.6E-42 270.1 22.2 228 7-236 281-520 (637)
19 PRK08314 long-chain-fatty-acid 100.0 3.4E-37 7.4E-42 266.1 21.3 226 7-236 225-453 (546)
20 PRK06839 acyl-CoA synthetase; 100.0 5.3E-37 1.1E-41 262.0 21.9 225 7-236 184-408 (496)
21 PLN02736 long-chain acyl-CoA s 100.0 1.5E-37 3.3E-42 273.2 18.8 225 6-236 255-525 (651)
22 PRK08633 2-acyl-glycerophospho 100.0 2.9E-37 6.3E-42 286.5 20.9 229 6-236 816-1056(1146)
23 PRK07529 AMP-binding domain pr 100.0 7.1E-37 1.5E-41 268.1 22.1 227 5-236 246-482 (632)
24 PRK06145 acyl-CoA synthetase; 100.0 8E-37 1.7E-41 261.0 21.8 227 7-236 184-410 (497)
25 PRK07656 long-chain-fatty-acid 100.0 7.1E-37 1.5E-41 262.1 21.5 229 6-236 200-429 (513)
26 PLN03051 acyl-activating enzym 100.0 5.2E-37 1.1E-41 262.3 20.4 225 7-236 154-394 (499)
27 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 1.2E-36 2.7E-41 262.3 22.0 225 7-236 230-454 (538)
28 PRK08315 AMP-binding domain pr 100.0 1.3E-36 2.8E-41 263.2 21.3 230 6-236 233-464 (559)
29 PRK08316 acyl-CoA synthetase; 100.0 1.1E-36 2.4E-41 261.5 20.8 227 7-236 206-432 (523)
30 PRK04319 acetyl-CoA synthetase 100.0 1.6E-36 3.4E-41 263.3 21.5 226 6-236 239-469 (570)
31 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 3E-36 6.6E-41 259.3 21.7 227 6-236 217-445 (527)
32 PRK12583 acyl-CoA synthetase; 100.0 4E-36 8.7E-41 260.1 21.4 229 6-236 235-465 (558)
33 PLN02861 long-chain-fatty-acid 100.0 1.2E-36 2.6E-41 267.6 18.2 221 10-236 263-531 (660)
34 PLN02330 4-coumarate--CoA liga 100.0 5.2E-36 1.1E-40 258.8 21.7 224 12-236 226-454 (546)
35 PRK07514 malonyl-CoA synthase; 100.0 4E-36 8.7E-41 257.0 20.8 225 6-236 190-414 (504)
36 PRK05677 long-chain-fatty-acid 100.0 7.1E-36 1.5E-40 258.8 22.3 219 13-236 251-470 (562)
37 PRK10524 prpE propionyl-CoA sy 100.0 3.8E-36 8.3E-41 263.6 20.5 229 6-236 268-510 (629)
38 PRK07638 acyl-CoA synthetase; 100.0 7.2E-36 1.6E-40 254.6 21.7 222 6-236 177-398 (487)
39 PRK05605 long-chain-fatty-acid 100.0 7.1E-36 1.5E-40 259.4 21.8 221 12-236 261-482 (573)
40 PRK06060 acyl-CoA synthetase; 100.0 6.3E-36 1.4E-40 265.2 21.6 221 7-236 181-402 (705)
41 PRK03640 O-succinylbenzoic aci 100.0 8.5E-36 1.8E-40 253.8 21.1 222 7-236 176-397 (483)
42 PRK07787 acyl-CoA synthetase; 100.0 9.4E-36 2E-40 253.0 20.8 225 5-236 161-388 (471)
43 PRK13382 acyl-CoA synthetase; 100.0 1.1E-35 2.5E-40 256.2 21.1 221 7-236 231-453 (537)
44 COG1022 FAA1 Long-chain acyl-C 100.0 3.6E-36 7.8E-41 255.7 16.7 211 7-235 226-486 (613)
45 PRK06087 short chain acyl-CoA 100.0 1.3E-35 2.8E-40 256.4 20.1 227 6-236 221-447 (547)
46 PRK09274 peptide synthase; Pro 100.0 1.2E-35 2.6E-40 256.9 19.8 222 6-236 208-457 (552)
47 PRK09088 acyl-CoA synthetase; 100.0 3.5E-35 7.6E-40 250.4 22.0 225 8-236 171-398 (488)
48 PRK06710 long-chain-fatty-acid 100.0 2.8E-35 6.2E-40 255.1 21.7 221 12-236 248-468 (563)
49 PRK12492 long-chain-fatty-acid 100.0 4.4E-35 9.4E-40 253.9 22.5 220 13-236 258-478 (562)
50 PRK06188 acyl-CoA synthetase; 100.0 2.6E-35 5.6E-40 253.3 20.6 225 6-236 202-430 (524)
51 PRK10946 entE enterobactin syn 100.0 2.6E-35 5.6E-40 254.0 20.4 227 6-236 216-446 (536)
52 PRK07786 long-chain-fatty-acid 100.0 4.8E-35 1E-39 252.6 21.9 221 11-236 214-436 (542)
53 TIGR01733 AA-adenyl-dom amino 100.0 5.3E-35 1.2E-39 243.8 20.4 225 6-236 154-392 (408)
54 KOG1175 Acyl-CoA synthetase [L 100.0 1.7E-35 3.8E-40 249.5 17.1 232 3-236 271-512 (626)
55 PRK05852 acyl-CoA synthetase; 100.0 5.5E-35 1.2E-39 251.8 20.4 226 6-236 210-445 (534)
56 PRK12467 peptide synthase; Pro 100.0 2.3E-35 5E-40 295.1 20.1 228 4-236 3269-3508(3956)
57 PRK06187 long-chain-fatty-acid 100.0 6.9E-35 1.5E-39 250.1 20.4 226 6-236 201-432 (521)
58 TIGR03443 alpha_am_amid L-amin 100.0 4E-35 8.7E-40 276.3 20.3 228 4-236 447-715 (1389)
59 PRK07769 long-chain-fatty-acid 100.0 1.3E-35 2.9E-40 260.2 15.9 228 6-236 214-500 (631)
60 PRK13383 acyl-CoA synthetase; 100.0 1.4E-34 3E-39 248.4 21.6 221 7-236 211-433 (516)
61 PRK08043 bifunctional acyl-[ac 100.0 7.7E-35 1.7E-39 258.6 20.5 220 6-236 399-628 (718)
62 PRK12316 peptide synthase; Pro 100.0 4.6E-35 1E-39 296.8 21.3 228 4-236 687-923 (5163)
63 PRK13390 acyl-CoA synthetase; 100.0 1.1E-34 2.4E-39 248.2 20.5 224 7-236 189-416 (501)
64 TIGR02262 benz_CoA_lig benzoat 100.0 1.4E-34 2.9E-39 248.0 21.0 225 6-236 196-421 (508)
65 PRK06164 acyl-CoA synthetase; 100.0 9E-35 2E-39 250.8 20.0 227 5-236 214-443 (540)
66 PRK05851 long-chain-fatty-acid 100.0 3.2E-35 6.9E-40 252.8 16.8 223 6-236 186-432 (525)
67 PRK10252 entF enterobactin syn 100.0 1.1E-34 2.4E-39 272.0 21.4 229 4-236 630-874 (1296)
68 PRK06155 crotonobetaine/carnit 100.0 2.3E-34 5E-39 248.3 21.7 221 6-236 214-437 (542)
69 PRK05857 acyl-CoA synthetase; 100.0 1.3E-34 2.9E-39 249.8 20.1 223 8-236 209-439 (540)
70 PRK12406 long-chain-fatty-acid 100.0 3.6E-34 7.7E-39 245.4 21.7 225 6-236 189-416 (509)
71 PRK07470 acyl-CoA synthetase; 100.0 2.1E-34 4.5E-39 247.9 20.2 222 9-236 202-431 (528)
72 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.6E-34 7.9E-39 245.5 21.5 225 7-236 196-431 (515)
73 TIGR03205 pimA dicarboxylate-- 100.0 4.9E-34 1.1E-38 246.3 22.1 221 12-236 237-458 (541)
74 PTZ00216 acyl-CoA synthetase; 100.0 1.1E-34 2.3E-39 256.8 18.3 217 11-236 308-574 (700)
75 PLN02387 long-chain-fatty-acid 100.0 1.3E-34 2.8E-39 255.9 18.7 223 9-236 288-573 (696)
76 PRK07059 Long-chain-fatty-acid 100.0 5.1E-34 1.1E-38 247.0 22.0 220 13-236 252-472 (557)
77 PRK06178 acyl-CoA synthetase; 100.0 6.1E-34 1.3E-38 247.0 22.3 227 8-236 246-479 (567)
78 COG1021 EntE Peptide arylation 100.0 1.8E-35 3.9E-40 232.5 11.0 227 6-236 223-451 (542)
79 PRK12467 peptide synthase; Pro 100.0 2.5E-34 5.3E-39 287.8 21.1 229 4-236 1750-1991(3956)
80 PRK08008 caiC putative crotono 100.0 1.1E-33 2.4E-38 242.8 22.3 223 9-236 210-435 (517)
81 PRK13391 acyl-CoA synthetase; 100.0 1E-33 2.3E-38 242.7 21.6 223 7-236 194-419 (511)
82 PRK07008 long-chain-fatty-acid 100.0 8.8E-34 1.9E-38 244.6 21.1 223 6-236 212-446 (539)
83 PRK12316 peptide synthase; Pro 100.0 3.1E-34 6.7E-39 290.9 20.8 228 5-236 2179-2418(5163)
84 PRK12476 putative fatty-acid-- 100.0 1.2E-34 2.6E-39 253.3 14.6 226 8-236 229-512 (612)
85 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.3E-33 2.8E-38 241.5 20.5 226 7-236 176-410 (502)
86 PRK05691 peptide synthase; Val 100.0 5.6E-34 1.2E-38 287.0 21.1 227 5-236 1306-1542(4334)
87 PLN02430 long-chain-fatty-acid 100.0 8.8E-34 1.9E-38 249.3 19.5 222 9-236 262-531 (660)
88 PRK08180 feruloyl-CoA synthase 100.0 1E-33 2.2E-38 247.5 19.7 212 12-234 251-480 (614)
89 PRK08276 long-chain-fatty-acid 100.0 1.6E-33 3.5E-38 241.0 20.5 220 11-236 185-406 (502)
90 PRK08751 putative long-chain f 100.0 2E-33 4.3E-38 243.4 21.1 220 13-236 254-474 (560)
91 PRK03584 acetoacetyl-CoA synth 100.0 2.1E-33 4.6E-38 247.3 21.0 225 6-236 298-535 (655)
92 KOG1256 Long-chain acyl-CoA sy 100.0 8.6E-34 1.9E-38 239.1 17.1 217 13-235 302-564 (691)
93 PRK07867 acyl-CoA synthetase; 100.0 4E-33 8.8E-38 239.9 21.5 221 5-236 185-418 (529)
94 PLN03052 acetate--CoA ligase; 100.0 4.5E-33 9.7E-38 246.5 21.9 224 8-236 392-626 (728)
95 PRK12582 acyl-CoA synthetase; 100.0 2.5E-33 5.4E-38 245.5 18.5 213 13-236 264-494 (624)
96 PRK08974 long-chain-fatty-acid 100.0 1.1E-32 2.3E-37 238.9 21.9 221 11-236 248-469 (560)
97 TIGR01217 ac_ac_CoA_syn acetoa 100.0 5.7E-33 1.2E-37 244.1 20.2 224 7-236 300-536 (652)
98 PRK04813 D-alanine--poly(phosp 100.0 1.4E-32 2.9E-37 235.1 20.7 227 6-236 177-412 (503)
99 PRK07868 acyl-CoA synthetase; 100.0 8.8E-33 1.9E-37 251.8 20.3 218 7-236 640-873 (994)
100 PRK05691 peptide synthase; Val 100.0 6.3E-33 1.4E-37 279.5 21.1 226 5-236 3902-4139(4334)
101 PRK13388 acyl-CoA synthetase; 100.0 1.3E-32 2.8E-37 237.4 20.2 222 5-236 183-417 (540)
102 PRK06814 acylglycerophosphoeth 100.0 1.9E-32 4.2E-37 254.2 22.5 221 5-236 826-1047(1140)
103 PRK05620 long-chain-fatty-acid 100.0 1.9E-32 4.2E-37 238.0 20.8 225 7-236 218-467 (576)
104 PRK06018 putative acyl-CoA syn 100.0 4.4E-32 9.5E-37 234.2 22.1 222 7-236 214-447 (542)
105 PLN03102 acyl-activating enzym 100.0 4.2E-32 9E-37 235.9 20.5 221 9-236 223-457 (579)
106 PLN02479 acetate-CoA ligase 100.0 7E-32 1.5E-36 234.1 21.0 225 7-236 230-467 (567)
107 PRK07445 O-succinylbenzoic aci 100.0 4.4E-32 9.5E-37 229.1 18.3 206 8-236 156-361 (452)
108 TIGR01923 menE O-succinylbenzo 100.0 1.2E-31 2.7E-36 225.4 19.5 214 5-236 144-357 (436)
109 PRK08279 long-chain-acyl-CoA s 100.0 1.4E-31 2.9E-36 233.7 19.7 223 5-236 232-476 (600)
110 PRK05850 acyl-CoA synthetase; 100.0 9E-32 1.9E-36 233.9 17.7 222 11-236 205-473 (578)
111 PRK09192 acyl-CoA synthetase; 100.0 2.9E-31 6.4E-36 230.7 17.3 226 7-236 212-475 (579)
112 PRK07768 long-chain-fatty-acid 100.0 7.9E-31 1.7E-35 226.5 18.9 227 7-236 187-451 (545)
113 PRK08162 acyl-CoA synthetase; 100.0 3.1E-30 6.7E-35 222.8 21.2 224 8-236 218-453 (545)
114 PRK07798 acyl-CoA synthetase; 100.0 7.5E-30 1.6E-34 219.6 22.8 218 11-236 217-445 (533)
115 PRK08308 acyl-CoA synthetase; 100.0 3.1E-29 6.8E-34 209.8 19.8 194 6-236 135-328 (414)
116 PRK09029 O-succinylbenzoic aci 100.0 2E-29 4.3E-34 213.5 18.2 201 5-236 168-368 (458)
117 PRK07824 O-succinylbenzoic aci 100.0 5.2E-28 1.1E-32 198.7 20.3 193 12-236 73-270 (358)
118 TIGR02155 PA_CoA_ligase phenyl 100.0 4.4E-28 9.6E-33 203.2 18.6 211 8-236 114-332 (422)
119 KOG1180 Acyl-CoA synthetase [L 100.0 2.8E-28 6E-33 199.0 12.4 221 9-234 275-551 (678)
120 KOG1179 Very long-chain acyl-C 99.9 1E-26 2.3E-31 190.3 17.6 228 6-236 276-525 (649)
121 TIGR02372 4_coum_CoA_lig 4-cou 99.9 1.1E-23 2.3E-28 173.8 17.2 175 13-236 138-312 (386)
122 TIGR03335 F390_ftsA coenzyme F 99.9 2.8E-23 6E-28 175.0 18.6 208 8-235 125-343 (445)
123 COG1020 EntF Non-ribosomal pep 99.9 2.1E-23 4.7E-28 183.6 18.5 228 5-235 399-632 (642)
124 COG1541 PaaK Coenzyme F390 syn 99.9 2.4E-21 5.1E-26 157.7 16.9 208 8-235 129-347 (438)
125 PTZ00297 pantothenate kinase; 99.7 1.1E-15 2.4E-20 142.1 14.4 187 10-235 642-873 (1452)
126 TIGR02304 aden_form_hyp probab 99.6 4E-14 8.7E-19 117.8 11.1 154 49-234 175-344 (430)
127 KOG3628 Predicted AMP-binding 99.1 7.1E-10 1.5E-14 98.2 12.2 229 6-235 977-1265(1363)
128 KOG1178 Non-ribosomal peptide 99.0 2.8E-09 6.1E-14 96.0 11.9 227 5-235 229-490 (1032)
129 PF04443 LuxE: Acyl-protein sy 98.8 7.9E-07 1.7E-11 72.9 16.1 164 35-223 161-350 (365)
130 KOG3628 Predicted AMP-binding 98.7 8.9E-08 1.9E-12 85.4 10.3 224 5-229 302-601 (1363)
131 TIGR03089 conserved hypothetic 98.6 8.4E-08 1.8E-12 73.9 5.7 57 6-63 171-227 (227)
132 PRK09188 serine/threonine prot 98.2 1.4E-06 3E-11 71.6 3.7 34 197-235 207-244 (365)
133 PF03321 GH3: GH3 auxin-respon 98.1 2.5E-05 5.5E-10 67.5 9.1 126 86-234 266-408 (528)
134 PLN02620 indole-3-acetic acid- 98.0 9.7E-05 2.1E-09 64.1 10.8 131 84-235 301-461 (612)
135 PLN02247 indole-3-acetic acid- 97.8 0.00017 3.7E-09 62.7 10.0 131 84-235 290-455 (606)
136 PLN02249 indole-3-acetic acid- 97.8 0.00064 1.4E-08 59.5 12.4 128 85-234 300-447 (597)
137 PLN02736 long-chain acyl-CoA s 82.1 14 0.0003 33.3 9.5 82 8-95 98-180 (651)
138 PLN02387 long-chain-fatty-acid 78.9 20 0.00043 32.7 9.5 84 7-96 125-209 (696)
139 KOG1177 Long chain fatty acid 78.1 28 0.0006 30.2 9.2 88 7-96 96-198 (596)
140 TIGR02370 pyl_corrinoid methyl 75.1 13 0.00028 28.0 6.1 88 14-103 85-181 (197)
141 PTZ00342 acyl-CoA synthetase; 74.0 41 0.00089 31.1 10.1 77 14-96 131-208 (746)
142 PRK06187 long-chain-fatty-acid 73.4 40 0.00086 29.0 9.7 68 8-77 51-119 (521)
143 PRK07656 long-chain-fatty-acid 73.1 39 0.00085 29.0 9.5 66 8-75 50-116 (513)
144 PRK02261 methylaspartate mutas 72.8 21 0.00045 25.1 6.4 47 23-69 15-62 (137)
145 PRK04319 acetyl-CoA synthetase 71.9 28 0.0006 30.7 8.4 65 8-74 93-158 (570)
146 PRK07788 acyl-CoA synthetase; 71.1 31 0.00067 30.2 8.5 66 8-75 94-160 (549)
147 PTZ00237 acetyl-CoA synthetase 70.9 18 0.00038 32.6 7.0 60 8-69 112-172 (647)
148 PF00501 AMP-binding: AMP-bind 70.7 19 0.0004 30.1 6.8 59 7-67 40-99 (417)
149 PLN02430 long-chain-fatty-acid 70.2 50 0.0011 29.9 9.8 83 8-95 96-179 (660)
150 TIGR01733 AA-adenyl-dom amino 69.8 24 0.00053 29.2 7.3 66 8-75 20-86 (408)
151 PRK06839 acyl-CoA synthetase; 69.4 29 0.00064 29.7 7.9 66 8-75 48-114 (496)
152 PLN02654 acetate-CoA ligase 68.3 22 0.00048 32.2 7.1 61 8-70 140-201 (666)
153 TIGR03098 ligase_PEP_1 acyl-Co 67.3 36 0.00078 29.3 8.1 65 8-74 45-110 (515)
154 PRK08316 acyl-CoA synthetase; 67.1 37 0.00081 29.2 8.1 66 8-75 56-122 (523)
155 PRK06155 crotonobetaine/carnit 66.8 45 0.00098 29.2 8.6 67 8-76 66-133 (542)
156 PLN03102 acyl-activating enzym 66.7 40 0.00087 29.8 8.3 63 8-72 59-122 (579)
157 PRK08008 caiC putative crotono 66.2 51 0.0011 28.5 8.8 64 8-73 57-121 (517)
158 TIGR01217 ac_ac_CoA_syn acetoa 65.4 26 0.00057 31.6 7.0 60 8-69 134-194 (652)
159 TIGR02316 propion_prpE propion 64.5 29 0.00064 31.0 7.1 60 8-69 103-163 (628)
160 PLN02574 4-coumarate--CoA liga 64.4 42 0.00092 29.5 8.0 66 8-75 87-153 (560)
161 PLN02614 long-chain acyl-CoA s 64.2 47 0.001 30.1 8.3 66 8-75 99-165 (666)
162 PRK13383 acyl-CoA synthetase; 64.0 42 0.00091 29.1 7.9 66 8-75 80-146 (516)
163 PRK03584 acetoacetyl-CoA synth 63.7 30 0.00064 31.2 7.0 60 8-69 134-194 (655)
164 TIGR02188 Ac_CoA_lig_AcsA acet 63.5 29 0.00062 31.0 6.9 61 8-70 108-169 (625)
165 PRK05605 long-chain-fatty-acid 63.5 51 0.0011 29.0 8.4 66 8-75 77-143 (573)
166 PRK08314 long-chain-fatty-acid 63.4 50 0.0011 28.8 8.2 65 9-75 57-122 (546)
167 PRK09274 peptide synthase; Pro 63.3 32 0.00069 30.1 7.0 60 8-69 61-121 (552)
168 KOG1176 Acyl-CoA synthetase [L 63.2 39 0.00084 29.9 7.3 68 8-77 67-135 (537)
169 COG1021 EntE Peptide arylation 63.0 97 0.0021 26.5 9.1 91 7-102 72-167 (542)
170 PRK06334 long chain fatty acid 62.7 31 0.00067 30.2 6.8 66 8-75 62-128 (539)
171 PLN02861 long-chain-fatty-acid 62.5 52 0.0011 29.8 8.4 66 8-75 97-163 (660)
172 PLN03052 acetate--CoA ligase; 62.4 34 0.00074 31.4 7.2 61 8-70 228-289 (728)
173 PRK08751 putative long-chain f 62.4 49 0.0011 29.0 8.0 65 7-73 70-135 (560)
174 PLN02246 4-coumarate--CoA liga 61.9 43 0.00092 29.2 7.5 64 8-73 70-134 (537)
175 PRK07514 malonyl-CoA synthase; 61.7 59 0.0013 27.9 8.3 65 8-74 48-113 (504)
176 PRK10524 prpE propionyl-CoA sy 61.4 34 0.00074 30.6 7.0 60 8-69 104-164 (629)
177 PRK08162 acyl-CoA synthetase; 61.0 52 0.0011 28.7 7.9 66 8-75 63-129 (545)
178 PRK05857 acyl-CoA synthetase; 59.0 44 0.00096 29.2 7.1 61 8-70 61-122 (540)
179 PRK08279 long-chain-acyl-CoA s 58.9 67 0.0014 28.5 8.3 65 8-74 82-147 (600)
180 PRK00174 acetyl-CoA synthetase 57.8 45 0.00098 29.9 7.1 60 8-69 118-178 (637)
181 PRK07798 acyl-CoA synthetase; 57.6 78 0.0017 27.3 8.4 66 8-75 48-114 (533)
182 PRK05677 long-chain-fatty-acid 57.2 67 0.0015 28.2 8.0 62 8-71 70-132 (562)
183 PRK05620 long-chain-fatty-acid 56.3 52 0.0011 29.0 7.2 66 8-75 59-125 (576)
184 PLN02860 o-succinylbenzoate-Co 56.3 52 0.0011 29.0 7.1 60 8-69 52-112 (563)
185 cd02069 methionine_synthase_B1 56.1 89 0.0019 23.8 8.6 89 14-106 90-186 (213)
186 PF11142 DUF2917: Protein of u 56.1 42 0.0009 20.0 5.3 34 171-219 25-58 (63)
187 TIGR02262 benz_CoA_lig benzoat 55.7 99 0.0021 26.6 8.7 65 8-74 50-115 (508)
188 PRK08276 long-chain-fatty-acid 55.5 78 0.0017 27.2 8.0 66 8-75 31-97 (502)
189 TIGR01923 menE O-succinylbenzo 55.4 67 0.0015 26.9 7.5 61 8-70 19-80 (436)
190 COG2351 Transthyretin-like pro 54.9 30 0.00064 23.6 4.1 18 143-160 18-35 (124)
191 PRK07470 acyl-CoA synthetase; 54.6 77 0.0017 27.5 7.9 62 8-71 52-114 (528)
192 PRK07867 acyl-CoA synthetase; 53.7 64 0.0014 28.1 7.3 63 9-73 50-113 (529)
193 PRK08315 AMP-binding domain pr 53.4 64 0.0014 28.2 7.2 61 8-70 63-124 (559)
194 PRK07059 Long-chain-fatty-acid 52.9 95 0.0021 27.2 8.2 63 8-72 68-131 (557)
195 PRK06087 short chain acyl-CoA 52.7 65 0.0014 28.1 7.2 59 8-68 69-128 (547)
196 PRK12406 long-chain-fatty-acid 52.6 89 0.0019 26.9 8.0 66 8-75 31-97 (509)
197 PRK12492 long-chain-fatty-acid 52.1 72 0.0016 28.0 7.3 61 8-70 70-131 (562)
198 PLN02330 4-coumarate--CoA liga 52.1 62 0.0013 28.3 6.9 63 8-72 75-138 (546)
199 PRK12583 acyl-CoA synthetase; 51.8 74 0.0016 27.8 7.4 61 8-70 65-126 (558)
200 PLN02479 acetate-CoA ligase 51.4 1.2E+02 0.0025 26.8 8.6 63 8-72 65-128 (567)
201 PRK13388 acyl-CoA synthetase; 51.2 1E+02 0.0023 26.9 8.2 63 9-73 47-111 (540)
202 PRK07529 AMP-binding domain pr 51.0 66 0.0014 28.9 7.0 59 8-68 78-136 (632)
203 PRK06178 acyl-CoA synthetase; 50.6 1E+02 0.0023 27.0 8.1 66 8-75 78-144 (567)
204 COG0365 Acs Acyl-coenzyme A sy 50.4 42 0.00092 29.6 5.5 65 6-73 59-124 (528)
205 PRK06018 putative acyl-CoA syn 50.4 71 0.0015 27.9 7.0 63 8-72 59-122 (542)
206 PRK13382 acyl-CoA synthetase; 50.2 1.3E+02 0.0029 26.2 8.7 63 8-72 88-151 (537)
207 PRK06164 acyl-CoA synthetase; 50.2 74 0.0016 27.7 7.1 61 8-70 55-116 (540)
208 PTZ00216 acyl-CoA synthetase; 49.9 1.1E+02 0.0025 27.9 8.4 66 8-75 141-207 (700)
209 PRK03640 O-succinylbenzoic aci 49.8 1.3E+02 0.0028 25.6 8.4 63 8-72 47-110 (483)
210 PRK08974 long-chain-fatty-acid 49.4 89 0.0019 27.4 7.5 62 8-71 69-131 (560)
211 PRK06188 acyl-CoA synthetase; 48.5 94 0.002 26.9 7.5 61 8-70 57-118 (524)
212 PRK13295 cyclohexanecarboxylat 48.3 86 0.0019 27.4 7.2 60 8-69 75-135 (547)
213 PRK11904 bifunctional proline 48.2 82 0.0018 30.5 7.3 79 11-97 683-772 (1038)
214 PRK09088 acyl-CoA synthetase; 48.0 94 0.002 26.6 7.3 60 8-69 42-102 (488)
215 cd07124 ALDH_PutA-P5CDH-RocA D 47.9 1.2E+02 0.0026 26.6 8.0 49 12-60 166-219 (512)
216 cd07131 ALDH_AldH-CAJ73105 Unc 47.8 94 0.002 26.9 7.3 49 12-60 135-188 (478)
217 COG0318 CaiC Acyl-CoA syntheta 46.6 1.5E+02 0.0033 26.0 8.4 59 10-70 60-119 (534)
218 PRK12476 putative fatty-acid-- 46.2 1.5E+02 0.0032 26.5 8.5 63 10-74 89-155 (612)
219 PRK05850 acyl-CoA synthetase; 46.1 1E+02 0.0022 27.2 7.3 63 11-75 57-123 (578)
220 PRK07786 long-chain-fatty-acid 45.9 1.4E+02 0.003 26.0 8.2 63 8-72 62-125 (542)
221 PRK06060 acyl-CoA synthetase; 45.8 1.1E+02 0.0024 27.9 7.7 61 8-70 50-111 (705)
222 PF03808 Glyco_tran_WecB: Glyc 45.0 46 0.001 24.3 4.3 76 37-118 3-79 (172)
223 PTZ00297 pantothenate kinase; 44.8 2E+02 0.0043 29.2 9.4 80 8-96 477-556 (1452)
224 PRK13391 acyl-CoA synthetase; 44.6 1.6E+02 0.0034 25.5 8.2 64 8-73 44-108 (511)
225 PRK06710 long-chain-fatty-acid 44.5 1E+02 0.0022 27.1 7.1 62 8-71 69-131 (563)
226 PRK07008 long-chain-fatty-acid 44.2 1.4E+02 0.0031 26.0 8.0 63 8-72 59-122 (539)
227 TIGR01734 D-ala-DACP-lig D-ala 44.1 1E+02 0.0022 26.4 7.0 60 9-70 46-106 (502)
228 cd07141 ALDH_F1AB_F2_RALDH1 NA 43.8 1.5E+02 0.0033 25.7 7.9 49 12-60 145-198 (481)
229 cd02070 corrinoid_protein_B12- 43.2 1.4E+02 0.003 22.4 10.3 88 14-103 84-179 (201)
230 PRK05852 acyl-CoA synthetase; 43.0 1.1E+02 0.0024 26.7 7.0 58 8-67 63-121 (534)
231 PRK09192 acyl-CoA synthetase; 42.9 1.6E+02 0.0034 26.1 8.1 66 8-75 69-142 (579)
232 PRK11809 putA trifunctional tr 42.8 99 0.0021 30.8 7.0 80 11-98 767-857 (1318)
233 cd04910 ACT_AK-Ectoine_1 ACT d 42.4 81 0.0017 19.4 4.4 51 51-116 19-69 (71)
234 PF00818 Ice_nucleation: Ice n 42.2 10 0.00022 15.8 0.2 9 120-128 1-9 (16)
235 cd07109 ALDH_AAS00426 Uncharac 41.7 1.8E+02 0.0038 25.0 7.9 77 13-97 118-205 (454)
236 TIGR01722 MMSDH methylmalonic 41.7 1.7E+02 0.0036 25.5 7.8 66 13-78 137-212 (477)
237 PRK11905 bifunctional proline 40.6 1.1E+02 0.0023 30.3 6.9 80 11-98 675-765 (1208)
238 cd07085 ALDH_F6_MMSDH Methylma 40.0 2.1E+02 0.0045 24.8 8.2 65 14-78 138-212 (478)
239 cd07100 ALDH_SSADH1_GabD1 Myco 39.7 1.9E+02 0.004 24.7 7.7 50 11-60 95-149 (429)
240 PRK04813 D-alanine--poly(phosp 39.5 1.3E+02 0.0029 25.7 7.0 60 8-69 47-107 (503)
241 PRK12582 acyl-CoA synthetase; 39.1 1.1E+02 0.0023 27.5 6.5 60 8-69 100-165 (624)
242 PRK13390 acyl-CoA synthetase; 39.0 2.1E+02 0.0046 24.5 8.2 60 8-69 44-104 (501)
243 TIGR03208 cyc_hxne_CoA_lg cycl 38.8 1.3E+02 0.0029 26.2 6.9 60 8-69 73-133 (538)
244 cd07105 ALDH_SaliADH Salicylal 38.5 1.8E+02 0.0038 24.9 7.4 50 11-60 97-151 (432)
245 cd07119 ALDH_BADH-GbsA Bacillu 38.3 1.7E+02 0.0036 25.4 7.3 47 14-60 136-187 (482)
246 cd02071 MM_CoA_mut_B12_BD meth 38.3 1.3E+02 0.0027 20.5 8.0 84 23-110 11-101 (122)
247 TIGR01780 SSADH succinate-semi 38.0 2.1E+02 0.0045 24.6 7.8 50 12-61 117-171 (448)
248 cd07125 ALDH_PutA-P5CDH Delta( 38.0 1.6E+02 0.0035 25.9 7.2 50 11-60 166-220 (518)
249 cd07110 ALDH_F10_BADH Arabidop 37.7 2.1E+02 0.0045 24.6 7.8 49 12-60 120-173 (456)
250 TIGR01237 D1pyr5carbox2 delta- 37.5 1.8E+02 0.0039 25.5 7.4 59 11-69 166-231 (511)
251 PLN02278 succinic semialdehyde 37.2 1.8E+02 0.0038 25.5 7.3 50 11-60 159-213 (498)
252 cd07097 ALDH_KGSADH-YcbD Bacil 37.1 1.8E+02 0.0038 25.2 7.3 47 14-60 137-188 (473)
253 TIGR02275 DHB_AMP_lig 2,3-dihy 36.6 1.4E+02 0.003 25.9 6.7 60 8-69 68-128 (527)
254 cd07083 ALDH_P5CDH ALDH subfam 36.3 2.2E+02 0.0047 25.0 7.7 50 11-60 153-207 (500)
255 PRK08180 feruloyl-CoA synthase 36.2 1.6E+02 0.0035 26.3 7.1 60 8-69 89-154 (614)
256 cd07139 ALDH_AldA-Rv0768 Mycob 36.1 2.7E+02 0.0059 24.1 8.2 49 12-60 137-190 (471)
257 PRK08633 2-acyl-glycerophospho 36.0 2.2E+02 0.0048 27.6 8.4 65 10-76 662-727 (1146)
258 PRK10090 aldehyde dehydrogenas 35.4 2.6E+02 0.0056 23.8 7.8 50 11-60 70-124 (409)
259 PRK03137 1-pyrroline-5-carboxy 35.2 3E+02 0.0064 24.2 8.4 49 12-60 171-224 (514)
260 cd07113 ALDH_PADH_NahF Escheri 35.0 1.9E+02 0.0041 25.1 7.2 78 12-97 142-229 (477)
261 TIGR03205 pimA dicarboxylate-- 34.9 1.7E+02 0.0037 25.5 7.0 60 8-69 66-126 (541)
262 PLN02419 methylmalonate-semial 34.6 3.5E+02 0.0076 24.5 8.7 68 11-78 248-325 (604)
263 PRK07445 O-succinylbenzoic aci 34.5 1.4E+02 0.003 25.5 6.2 57 11-69 43-100 (452)
264 cd07111 ALDH_F16 Aldehyde dehy 34.4 2.4E+02 0.0052 24.6 7.6 50 11-60 146-200 (480)
265 PLN02766 coniferyl-aldehyde de 34.1 2.8E+02 0.0061 24.3 8.0 50 11-60 157-211 (501)
266 PF00455 DeoRC: DeoR C termina 33.9 1.8E+02 0.0039 20.9 6.0 83 34-125 15-105 (161)
267 cd07078 ALDH NAD(P)+ dependent 33.6 2.8E+02 0.006 23.5 7.9 50 12-61 96-150 (432)
268 PRK08308 acyl-CoA synthetase; 33.5 2.3E+02 0.005 23.6 7.4 60 8-69 27-87 (414)
269 cd07089 ALDH_CddD-AldA-like Rh 33.3 2.2E+02 0.0048 24.5 7.2 49 12-60 123-176 (459)
270 PF01060 DUF290: Transthyretin 33.3 1.2E+02 0.0027 18.8 4.6 15 146-160 8-22 (80)
271 cd07145 ALDH_LactADH_F420-Bios 33.0 2E+02 0.0044 24.7 6.9 49 12-60 123-176 (456)
272 PRK09029 O-succinylbenzoic aci 32.9 2.4E+02 0.0051 23.9 7.4 60 8-69 48-108 (458)
273 cd07120 ALDH_PsfA-ACA09737 Pse 32.8 2.6E+02 0.0055 24.2 7.5 68 11-78 116-195 (455)
274 PRK07769 long-chain-fatty-acid 32.5 3.5E+02 0.0076 24.2 8.7 62 10-73 76-141 (631)
275 cd07148 ALDH_RL0313 Uncharacte 32.2 3E+02 0.0064 23.7 7.8 49 12-60 124-177 (455)
276 PLN02467 betaine aldehyde dehy 32.2 3.5E+02 0.0076 23.7 8.5 50 11-60 150-204 (503)
277 cd07118 ALDH_SNDH Gluconobacte 32.1 2.5E+02 0.0053 24.2 7.3 50 11-60 118-172 (454)
278 cd07138 ALDH_CddD_SSP0762 Rhod 32.0 3.3E+02 0.0071 23.5 8.1 50 11-60 129-183 (466)
279 cd07126 ALDH_F12_P5CDH Delta(1 31.5 3.1E+02 0.0066 24.1 7.8 50 11-60 141-195 (489)
280 TIGR03240 arg_catab_astD succi 30.8 3.4E+02 0.0074 23.6 8.0 50 11-60 131-185 (484)
281 COG1167 ARO8 Transcriptional r 30.7 1.6E+02 0.0036 25.4 6.0 57 10-71 176-236 (459)
282 cd07092 ALDH_ABALDH-YdcW Esche 30.4 2.5E+02 0.0054 24.0 7.1 48 12-59 118-170 (450)
283 cd07091 ALDH_F1-2_Ald2-like AL 30.3 2.2E+02 0.0049 24.6 6.8 47 14-60 143-194 (476)
284 cd07143 ALDH_AldA_AN0554 Asper 30.3 2.7E+02 0.0059 24.2 7.3 49 12-60 144-197 (481)
285 PRK10252 entF enterobactin syn 30.3 2E+02 0.0043 28.5 7.1 65 8-74 503-568 (1296)
286 PF04016 DUF364: Domain of unk 30.3 29 0.00062 24.8 1.1 41 85-126 59-99 (147)
287 cd07088 ALDH_LactADH-AldA Esch 30.2 2.6E+02 0.0057 24.1 7.2 49 12-60 133-186 (468)
288 COG1012 PutA NAD-dependent ald 29.7 3.8E+02 0.0082 23.4 8.0 69 11-79 132-211 (472)
289 TIGR02518 EutH_ACDH acetaldehy 29.7 3.7E+02 0.008 23.5 8.0 65 14-78 106-185 (488)
290 cd07147 ALDH_F21_RNP123 Aldehy 29.6 2.8E+02 0.0061 23.8 7.3 49 12-60 123-176 (452)
291 cd07112 ALDH_GABALDH-PuuC Esch 29.5 3.6E+02 0.0077 23.3 7.9 48 13-60 125-177 (462)
292 PRK13252 betaine aldehyde dehy 29.5 3.8E+02 0.0083 23.3 8.3 47 14-60 144-195 (488)
293 PF10411 DsbC_N: Disulfide bon 28.8 60 0.0013 18.8 2.2 17 204-220 33-49 (57)
294 PF11974 MG1: Alpha-2-macroglo 28.4 71 0.0015 20.9 2.7 32 145-176 24-58 (97)
295 PRK07868 acyl-CoA synthetase; 28.3 3.1E+02 0.0067 26.5 7.9 64 8-75 492-555 (994)
296 TIGR03250 PhnAcAld_DH putative 28.2 3.7E+02 0.008 23.3 7.8 47 14-60 141-192 (472)
297 PRK07787 acyl-CoA synthetase; 28.2 2.8E+02 0.0061 23.6 7.1 56 12-69 44-100 (471)
298 cd07123 ALDH_F4-17_P5CDH Delta 28.0 4.2E+02 0.0091 23.4 8.1 47 14-60 172-222 (522)
299 cd07095 ALDH_SGSD_AstD N-succi 28.0 3.8E+02 0.0083 22.9 8.3 50 11-60 96-150 (431)
300 cd07102 ALDH_EDX86601 Uncharac 27.9 2.9E+02 0.0064 23.7 7.1 49 12-60 116-169 (452)
301 PRK09457 astD succinylglutamic 27.9 4.1E+02 0.0089 23.2 8.4 49 12-60 134-187 (487)
302 PRK08043 bifunctional acyl-[ac 27.9 2.5E+02 0.0055 25.7 7.1 60 10-71 252-312 (718)
303 PRK15398 aldehyde dehydrogenas 27.5 3.3E+02 0.0071 23.7 7.3 48 11-58 128-180 (465)
304 cd07150 ALDH_VaniDH_like Pseud 27.4 3.1E+02 0.0067 23.5 7.2 49 12-60 119-172 (451)
305 cd07107 ALDH_PhdK-like Nocardi 27.3 2.8E+02 0.006 23.9 6.9 48 12-59 116-168 (456)
306 TIGR03443 alpha_am_amid L-amin 27.1 2.3E+02 0.005 28.4 7.0 59 8-68 290-349 (1389)
307 cd07142 ALDH_F2BC Arabidosis a 26.9 2.9E+02 0.0062 24.0 6.9 48 13-60 142-194 (476)
308 PRK06145 acyl-CoA synthetase; 26.8 3.3E+02 0.0072 23.3 7.3 61 8-70 47-108 (497)
309 TIGR02299 HpaE 5-carboxymethyl 26.7 3.8E+02 0.0082 23.3 7.6 50 12-61 135-189 (488)
310 PF06543 Lac_bphage_repr: Lact 26.5 59 0.0013 18.1 1.7 22 91-112 23-44 (49)
311 TIGR01238 D1pyr5carbox3 delta- 26.3 4.2E+02 0.0091 23.3 7.8 68 11-78 159-237 (500)
312 PRK09406 gabD1 succinic semial 26.2 3.9E+02 0.0085 23.0 7.6 50 11-60 122-176 (457)
313 PRK07638 acyl-CoA synthetase; 26.1 3.2E+02 0.0069 23.3 7.1 56 12-69 49-105 (487)
314 cd07122 ALDH_F20_ACDH Coenzyme 25.8 3.3E+02 0.0072 23.4 7.0 35 13-47 96-131 (436)
315 TIGR03216 OH_muco_semi_DH 2-hy 25.7 3.1E+02 0.0068 23.8 6.9 49 12-60 139-192 (481)
316 PRK13473 gamma-aminobutyraldeh 25.6 3.9E+02 0.0084 23.1 7.5 47 13-59 139-190 (475)
317 COG1922 WecG Teichoic acid bio 25.5 3.4E+02 0.0074 21.5 6.6 82 32-118 57-139 (253)
318 cd07559 ALDH_ACDHII_AcoD-like 25.5 4.5E+02 0.0098 22.9 7.9 48 12-59 136-188 (480)
319 PF02310 B12-binding: B12 bind 25.3 2.1E+02 0.0045 18.9 6.4 45 22-67 11-57 (121)
320 cd07093 ALDH_F8_HMSADH Human a 25.1 4.2E+02 0.0091 22.7 7.6 48 13-60 118-170 (455)
321 cd07144 ALDH_ALD2-YMR170C Sacc 25.1 4.1E+02 0.0089 23.1 7.5 49 12-60 144-197 (484)
322 cd07140 ALDH_F1L_FTFDH 10-form 25.0 4.7E+02 0.01 22.9 7.8 50 11-60 146-200 (486)
323 PLN02466 aldehyde dehydrogenas 24.9 4.3E+02 0.0094 23.5 7.6 49 12-60 195-248 (538)
324 TIGR01236 D1pyr5carbox1 delta- 24.7 5E+02 0.011 23.1 8.0 65 14-78 172-246 (533)
325 PRK13968 putative succinate se 24.7 4.5E+02 0.0098 22.7 7.6 50 11-60 125-179 (462)
326 PF14617 CMS1: U3-containing 9 24.4 3E+02 0.0064 21.8 5.9 49 49-100 165-213 (252)
327 PLN02418 delta-1-pyrroline-5-c 24.3 4E+02 0.0087 24.7 7.5 78 12-98 405-494 (718)
328 PRK14717 putative glycine/sarc 23.9 1.2E+02 0.0026 20.0 3.0 50 103-155 8-57 (107)
329 PRK13805 bifunctional acetalde 23.9 3.3E+02 0.0073 25.8 7.1 76 14-97 110-200 (862)
330 cd07084 ALDH_KGSADH-like ALDH 23.8 3.9E+02 0.0084 23.0 7.1 50 11-60 99-153 (442)
331 cd07114 ALDH_DhaS Uncharacteri 23.7 4.7E+02 0.01 22.5 8.8 48 13-60 120-172 (457)
332 PRK06814 acylglycerophosphoeth 23.5 4.5E+02 0.0099 25.6 8.2 62 9-72 678-740 (1140)
333 KOG1794 N-Acetylglucosamine ki 23.4 3.9E+02 0.0084 21.8 6.2 72 86-162 68-141 (336)
334 cd07115 ALDH_HMSADH_HapE Pseud 23.2 3.7E+02 0.0081 23.1 6.9 49 12-60 117-170 (453)
335 PF12101 DUF3577: Protein of u 23.2 83 0.0018 22.2 2.3 22 215-236 107-130 (137)
336 PRK11241 gabD succinate-semial 22.8 4.2E+02 0.0091 23.1 7.1 49 12-60 146-199 (482)
337 TIGR03374 ABALDH 1-pyrroline d 22.4 5.2E+02 0.011 22.5 8.0 49 11-59 136-189 (472)
338 PHA00736 hypothetical protein 22.4 24 0.00051 21.1 -0.4 25 16-40 51-75 (79)
339 cd07086 ALDH_F7_AASADH-like NA 22.0 4.7E+02 0.01 22.7 7.3 49 12-60 133-186 (478)
340 cd07128 ALDH_MaoC-N N-terminal 21.9 3.9E+02 0.0085 23.6 6.8 57 13-69 145-209 (513)
341 PRK05718 keto-hydroxyglutarate 21.6 3.7E+02 0.0081 20.5 8.1 80 31-118 79-160 (212)
342 PF14779 BBS1: Ciliary BBSome 21.6 4.2E+02 0.009 21.0 8.6 74 35-118 84-175 (257)
343 PRK09847 gamma-glutamyl-gamma- 21.5 5.5E+02 0.012 22.4 8.0 50 11-60 156-210 (494)
344 PF08789 PBCV_basic_adap: PBCV 21.5 1.5E+02 0.0032 16.0 2.5 26 209-234 4-31 (40)
345 TIGR03089 conserved hypothetic 21.4 1.9E+02 0.0042 22.1 4.4 36 8-45 48-83 (227)
346 cd07103 ALDH_F5_SSADH_GabD Mit 21.3 3.3E+02 0.0071 23.3 6.2 48 13-60 118-170 (451)
347 cd07121 ALDH_EutE Ethanolamine 21.3 5.1E+02 0.011 22.2 7.2 48 11-58 96-148 (429)
348 TIGR01804 BADH glycine betaine 21.2 5.4E+02 0.012 22.2 7.8 48 13-60 134-186 (467)
349 cd07082 ALDH_F11_NP-GAPDH NADP 21.1 5.1E+02 0.011 22.4 7.3 49 12-60 141-194 (473)
350 TIGR02278 PaaN-DH phenylacetic 21.1 3.8E+02 0.0082 24.6 6.7 57 14-70 146-210 (663)
351 TIGR00550 nadA quinolinate syn 20.8 3.8E+02 0.0082 21.9 6.0 77 49-125 40-118 (310)
352 TIGR00407 proA gamma-glutamyl 20.8 4.6E+02 0.01 22.2 6.8 45 12-57 103-151 (398)
353 PF00171 Aldedh: Aldehyde dehy 20.7 3.7E+02 0.0079 23.2 6.3 76 14-97 128-214 (462)
354 KOG1180 Acyl-CoA synthetase [L 20.6 6.4E+02 0.014 22.8 9.6 94 8-107 109-207 (678)
355 cd07106 ALDH_AldA-AAD23400 Str 20.6 5.4E+02 0.012 22.0 7.9 48 12-59 114-166 (446)
356 cd07090 ALDH_F9_TMBADH NAD+-de 20.1 5.6E+02 0.012 22.0 7.8 48 13-60 117-169 (457)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.4e-44 Score=302.85 Aligned_cols=226 Identities=50% Similarity=0.829 Sum_probs=208.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
......|+.++.+|++|.+|+...+.+.+..|++++....|++..+++.+++|++|++.++|..+..|++.+.....+++
T Consensus 220 ~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~ 299 (537)
T KOG1176|consen 220 WELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLS 299 (537)
T ss_pred ccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCC
Confidence 34555899999999999999977777788888888888889999999999999999999999999999999877788999
Q ss_pred CceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCC
Q 026609 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 167 (236)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~ 167 (236)
++|.+.++|+++++++.+.+.+.+|...+.+ .||+||++.+++.+..... .+++++|+++++++..+.+ +.|+.+++
T Consensus 300 sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q-~YGmTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~ 376 (537)
T KOG1176|consen 300 SLRSVLSGGAPLSPATLEKVKERLPNVTVIQ-GYGMTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGP 376 (537)
T ss_pred ccEEEEecCCCCCHHHHHHHHHhCCCceEEE-eeccccccCceeecCCCcc-CcccccCccccceEEEeeC-CCCCCCCC
Confidence 9999999999999999999999999888888 9999999977776555433 6889999999998888887 79999999
Q ss_pred CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 168 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 168 g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.||||++|+.++.||++||+.++..++.+|||+|||+|++|+||++++.+|.+|+||.+|++|+|.|
T Consensus 377 ~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~E 445 (537)
T KOG1176|consen 377 NQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAE 445 (537)
T ss_pred CCceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHH
Confidence 999999999999999999999999999977799999999999999999999999999999999999986
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=4.7e-42 Score=287.72 Aligned_cols=223 Identities=28% Similarity=0.357 Sum_probs=200.7
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC--C-CHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F-DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 82 (236)
..+++.++|+++++.++.|+.|+...++++|..|+++++.+. + ++++++++++++++|.++.+|+.++.|++....+
T Consensus 206 ~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~ 285 (528)
T COG0365 206 FHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGE 285 (528)
T ss_pred HhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcc
Confidence 356778999999999999999999999999999999999863 3 3899999999999999999999999999987656
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 162 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~ 162 (236)
..++++||.+.++||+++++.++++.+.++ +.+.+ .||+||+|.+.....+ ..+++..|.|+||+++.++|++ |
T Consensus 286 ~~dlssLr~~~SaGEPLnpe~~~w~~~~~g-~~i~d-~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~-g 359 (528)
T COG0365 286 PYDLSSLRVLGSAGEPLNPEAFEWFYSALG-VWILD-IYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDE-G 359 (528)
T ss_pred cccchhheeeeccCCCCCHHHHHHHHHHhC-CCEec-cccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCC-C
Confidence 778999999999999999999999999998 99999 9999999955554333 3344555999999999999965 9
Q ss_pred CCCCCCCceEEEEecC--ccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 163 KPLPPNQLGEIWLRGP--NMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 163 ~~~~~g~~Gel~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++.|+ |+|+++.+ +++.+||+|++...+.+... ||.|||.+++|+||+++|.||.||+||+.|++|.|.|
T Consensus 360 ~~~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~E 433 (528)
T COG0365 360 NPVPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLE 433 (528)
T ss_pred CcCCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHH
Confidence 9999999 99999986 88999999999998888444 9999999999999999999999999999999999875
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-41 Score=290.23 Aligned_cols=229 Identities=42% Similarity=0.650 Sum_probs=203.7
Q ss_pred eecc--CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 6 QETA--GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 6 ~~~~--~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
+.++ +.++|++++++|+||.+|+...++.+++.|+++++.+ .|++..++..+.++++|++.++|+++..|+.+...
T Consensus 205 ~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~ 284 (534)
T COG0318 205 AALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEK 284 (534)
T ss_pred HHhcccCCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCcc
Confidence 4455 7889999999999999999878888899999999988 59999999999999999999999999999999877
Q ss_pred CCCCCCC-ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCC
Q 026609 82 KKFDLSS-LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD 160 (236)
Q Consensus 82 ~~~~l~~-lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~ 160 (236)
...++.. +|.++.||++++++++++|++.|+...+.. .||+||++..++...........+..|+|+|+++++++|++
T Consensus 285 ~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~ 363 (534)
T COG0318 285 DDDDLSSSLRLVLSGGAPLPPELLERFEERFGPIAILE-GYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPD 363 (534)
T ss_pred CccccccceEEEEecCCcCCHHHHHHHHHHhCCCceEE-eecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCC
Confidence 7666665 999999999999999999999998567888 99999999777665443201345667999999999999977
Q ss_pred CCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 161 TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 161 ~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++| |+.|||+|+||.++.+||++++.+...|..+|||+|||++++|++|+++|.||.+|+|+.+|+||+|+|
T Consensus 364 ~~~~~p-g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~e 438 (534)
T COG0318 364 GGEVLP-GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEE 438 (534)
T ss_pred CCccCC-CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHH
Confidence 776777 999999999999999999999999987755699999999999999999999999999999999999975
No 4
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=8.5e-42 Score=273.27 Aligned_cols=228 Identities=30% Similarity=0.425 Sum_probs=208.6
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++.++++++...|++|++|.....++++..|+|+|++ +.|++...+++|+++++|.++++|+++..|++.+.....+
T Consensus 269 r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~ 348 (596)
T KOG1177|consen 269 RAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVD 348 (596)
T ss_pred HhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCc
Confidence 467778889999999999999889999999999999996 4799999999999999999999999999999999999999
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccC-CCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENS-FAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~-~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
++++|.++++|+++++++++.+..... ...+...||+||++++.+.... +.......++|...++.+..++| +.|..
T Consensus 349 ~s~lr~~vigGa~~s~eLlk~iv~~~~-m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~ 426 (596)
T KOG1177|consen 349 LSSLRKGVIGGAPVSPELLKLIVNQMN-MKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSE 426 (596)
T ss_pred hhhhhhheeCCCCCCHHHHHHHHHhhC-ceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCc
Confidence 999999999999999999999998764 5545559999999987776433 22345567899999999999999 78999
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+|-|..|||+++|.+.+.+||++++.+.+....+.||+|||.+.+|++|.++++||.+|+|+.+|++|+|.|
T Consensus 427 v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~E 498 (596)
T KOG1177|consen 427 VPLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTE 498 (596)
T ss_pred cccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHH
Confidence 999999999999999999999999999999989999999999999999999999999999999999999986
No 5
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.5e-40 Score=285.08 Aligned_cols=229 Identities=25% Similarity=0.412 Sum_probs=199.6
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..++..++|++++++|++|.+|+...++.++..|+++++.+ .+++..+++.++++++|.+.++|+++..|++.......
T Consensus 217 ~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 296 (539)
T PRK06334 217 KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQES 296 (539)
T ss_pred HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhccc
Confidence 34567889999999999999999777889999999999875 57999999999999999999999999999887655566
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
.++++|.++++|+++++++.+++.+.+++..+.+ .||+||++.++...... .......+|+|+++++++++|++++++
T Consensus 297 ~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d~~~~~~ 374 (539)
T PRK06334 297 CLPSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQ-GYGTTECSPVITINTVN-SPKHESCVGMPIRGMDVLIVSEETKVP 374 (539)
T ss_pred ccccccEEEECCccCCHHHHHHHHHHCCCCeEEe-cccccccCceEEeccCC-CCCCCCcCceecCCCEEEEEcCCCCcc
Confidence 7889999999999999999999999997678888 99999998766543222 123345789999999999999777899
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccc-cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTI-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++|+.|||+|+|+.++.||+++++.+.... ..++||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 375 ~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~e 447 (539)
T PRK06334 375 VSSGETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEA 447 (539)
T ss_pred CCCCceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHH
Confidence 9999999999999999999999987643321 34689999999999999999999999999999999999975
No 6
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=4.3e-39 Score=278.70 Aligned_cols=225 Identities=44% Similarity=0.790 Sum_probs=200.4
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc-CCCCCCCc
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-KKFDLSSL 89 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~l~~l 89 (236)
..+++++..+|++|.+|+...++.++..|+++++.+++++..+++.++++++|.+.++|+++..|.+.... ...+++++
T Consensus 242 ~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l 321 (560)
T PLN02574 242 GSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSL 321 (560)
T ss_pred CCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccc
Confidence 35689999999999999977788888999999999999999999999999999999999999999887543 34567899
Q ss_pred eEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCC
Q 026609 90 KLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 169 (236)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~ 169 (236)
|.++++|++++++++++|.+.+++..+.+ .||+||++.+...............+|+|.++++++++|++++++++.|+
T Consensus 322 r~~~~gg~~l~~~~~~~~~~~~~~~~v~~-~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~ 400 (560)
T PLN02574 322 KQVSCGAAPLSGKFIQDFVQTLPHVDFIQ-GYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGN 400 (560)
T ss_pred eEEEEecccCCHHHHHHHHHHCCCCcEEe-cccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCC
Confidence 99999999999999999999997688998 99999998765432222222456789999999999999988899999999
Q ss_pred ceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 170 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 170 ~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|||+++|+.++.||+++++.+...+..+|||+|||+++++++|.+++.||+||+||++|++|+|.|
T Consensus 401 ~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~e 467 (560)
T PLN02574 401 CGELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPAD 467 (560)
T ss_pred CeEEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHH
Confidence 9999999999999999999999888878999999999999999999999999999999999999975
No 7
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=6.9e-39 Score=281.96 Aligned_cols=229 Identities=21% Similarity=0.283 Sum_probs=199.0
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
..++++++|++++.+|++|..|+...++++|+.|+++++.++ +++..+++.++++++|.+.++|++++.|++....
T Consensus 310 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 389 (666)
T PLN02654 310 YAFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDE 389 (666)
T ss_pred HhcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCcc
Confidence 457788999999999999999987888999999999999863 5799999999999999999999999999886532
Q ss_pred --CCCCCCCceEEeecCCCCCHHHHHHHHHhCCC--CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEE
Q 026609 82 --KKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIV 157 (236)
Q Consensus 82 --~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~--~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 157 (236)
...+++++|.++++|+++++++++++.+.++. ..+.+ .||+||++..............++.+|.|++|++++++
T Consensus 390 ~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~-~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~ 468 (666)
T PLN02654 390 YVTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISD-TWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIV 468 (666)
T ss_pred ccccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceec-cccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEE
Confidence 34567899999999999999999999999874 46777 99999998765543322223456789999999999999
Q ss_pred eCCCCCCCCCCCceEEEEec--CccchhhcCCccccccccc--CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 158 SVDTQKPLPPNQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 158 ~~~~~~~~~~g~~Gel~v~~--~~~~~~~~~~~~~~~~~~~--~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
| ++|++++.++.|||++++ |+++.+||++++.+...+. .+|||+|||++++|+||.++++||+||+||++|++|+
T Consensus 469 d-~~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~ 547 (666)
T PLN02654 469 D-EKGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIG 547 (666)
T ss_pred C-CCCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEEC
Confidence 9 578899999999999998 7899999999988776552 3789999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 548 p~E 550 (666)
T PLN02654 548 TAE 550 (666)
T ss_pred HHH
Confidence 975
No 8
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=6.6e-38 Score=270.10 Aligned_cols=229 Identities=46% Similarity=0.773 Sum_probs=204.9
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.+++.++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|++........+
T Consensus 218 ~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~ 297 (537)
T PLN02246 218 NLYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDL 297 (537)
T ss_pred ccCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCc
Confidence 46678899999999999999997778899999999999999999999999999999999999999999988766556678
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccC---CCCCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENS---FAGSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~---~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
+++|.++++|+++++++.+.+.+.+++..+.+ .||+||++.++..... ......++.+|+|+++++++++|+++++
T Consensus 298 ~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 376 (537)
T PLN02246 298 SSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQ-GYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGA 376 (537)
T ss_pred cceeEEEEecCcCCHHHHHHHHHHcCCCeEec-cccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCC
Confidence 89999999999999999999999998677888 9999999876543211 1112345678999999999999977899
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+++|+.++.||+++++.+...+..++||+|||+++++++|.+++.||.||+||++|++|+|.|
T Consensus 377 ~~~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~e 449 (537)
T PLN02246 377 SLPRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAE 449 (537)
T ss_pred cCCCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHH
Confidence 9999999999999999999999999999888877899999999999999999999999999999999999964
No 9
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=9.5e-39 Score=267.17 Aligned_cols=214 Identities=40% Similarity=0.630 Sum_probs=187.1
Q ss_pred cEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCC---HHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC----CCCC
Q 026609 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD---LEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK----KFDL 86 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~l 86 (236)
|++++++|++|.+|+...++.+++.|+++++.+... ++.+++.++++++|+++++|++++.|++..+.. ..++
T Consensus 197 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l 276 (417)
T PF00501_consen 197 DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDL 276 (417)
T ss_dssp TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTG
T ss_pred ceEEeeccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccccccccc
Confidence 599999999999999889999999999999998654 467899999999999999999999999843222 3578
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+++++.++...+.+ .||+||++.+++.........+.+.+|.|+++++++++|++++++++
T Consensus 277 ~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~ 355 (417)
T PF00501_consen 277 SSLRTVISGGEPLPPDLLRRLRKAFGNAPIIN-LYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLP 355 (417)
T ss_dssp TT-SEEEEESST-CHHHHHHHHHHHTTSEEEE-EEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBES
T ss_pred ccccccccccccCChhhcccccccccccccee-cccccccceeeeccccccccccccccccccccccccccccccccccc
Confidence 89999999999999999999999998557888 99999999998754322223466789999999999999987799999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeec
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYK 228 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~ 228 (236)
+|+.|||+++++.++.+|+++++.+...|..+|||+|||+|++|++|++++.||.||+||++
T Consensus 356 ~g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 356 PGEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred ccccccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 99999999999999999999999999888666899999999999999999999999999974
No 10
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.1e-37 Score=273.15 Aligned_cols=228 Identities=28% Similarity=0.378 Sum_probs=197.8
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc-
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV- 81 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~- 81 (236)
.+++.++|++++.+|++|..++...++.++..|+++++.+. +++..+++.++++++|++.++|++++.|.+....
T Consensus 272 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 351 (625)
T TIGR02188 272 VFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEW 351 (625)
T ss_pred ccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcc
Confidence 45778899999999999999987788999999999999753 4799999999999999999999999999886532
Q ss_pred -CCCCCCCceEEeecCCCCCHHHHHHHHHhCCC--CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe
Q 026609 82 -KKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 82 -~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~--~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 158 (236)
...+++++|.++++|+++++++++++.+.++. ..+++ .||+||++..+..........+++.+|+|+++++++++|
T Consensus 352 ~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~-~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d 430 (625)
T TIGR02188 352 VKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVD-TWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD 430 (625)
T ss_pred cccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEe-cccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC
Confidence 23467899999999999999999999998863 67888 999999987655432222234567899999999999999
Q ss_pred CCCCCCCC-CCCceEEEEec--CccchhhcCCccccccccc--CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 159 VDTQKPLP-PNQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 159 ~~~~~~~~-~g~~Gel~v~~--~~~~~~~~~~~~~~~~~~~--~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
++|++++ +|+.|||++++ |+++.+||++++.+...+. .+|||+|||++++|++|.+++.||+||+||++|++|+
T Consensus 431 -~~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~ 509 (625)
T TIGR02188 431 -EEGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLG 509 (625)
T ss_pred -CCCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEEC
Confidence 6889999 99999999999 6899999999987766653 3789999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 510 p~e 512 (625)
T TIGR02188 510 TAE 512 (625)
T ss_pred HHH
Confidence 975
No 11
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=4.2e-38 Score=276.78 Aligned_cols=222 Identities=30% Similarity=0.475 Sum_probs=184.5
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC------
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK------ 82 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------ 82 (236)
++.++|++++.+|++|.++.. ....+++.|+++++.+ +++..+++.++++++|+++++|++++.+.+.....
T Consensus 265 ~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~ 342 (666)
T PLN02614 265 ALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGF 342 (666)
T ss_pred CCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCH
Confidence 467889999999999999984 4566788999998875 58999999999999999999999998876421000
Q ss_pred -------------------------CC-------------CC-CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccc
Q 026609 83 -------------------------KF-------------DL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGL 123 (236)
Q Consensus 83 -------------------------~~-------------~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~ 123 (236)
.. .+ +++|.+++||+++++++ +.|.+.+++..+++ .||+
T Consensus 343 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~-~YG~ 420 (666)
T PLN02614 343 LKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQ-GYGL 420 (666)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEe-eCch
Confidence 00 01 58999999999999875 56777776578888 9999
Q ss_pred cccccccccccCCCCCCCCCCccccCCCcEEEEEeCCC--CCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeE
Q 026609 124 TETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT--QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWV 201 (236)
Q Consensus 124 tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~--~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (236)
||++...+..... .....+++|+|+|+++++++|+++ ++++++|+.|||+|+|+.++.|||++++.+...| .+|||
T Consensus 421 TE~~~~~~~~~~~-~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~ 498 (666)
T PLN02614 421 TESCAGTFVSLPD-ELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWL 498 (666)
T ss_pred Hhhhhheeeeccc-cCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCc
Confidence 9987654432222 123467899999999999998332 4788999999999999999999999999999888 68999
Q ss_pred ecCceEEEcCCCcEEEEcccCCceee-ccEEeecCC
Q 026609 202 HTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 236 (236)
Q Consensus 202 ~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~ 236 (236)
+|||+|++|+||+++|+||+||+||+ +|++|+|+|
T Consensus 499 ~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~e 534 (666)
T PLN02614 499 HTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVEN 534 (666)
T ss_pred ccceEEEEcCCCCEEEEEcchhceecCCCeeecHHH
Confidence 99999999999999999999999997 799999975
No 12
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-37 Score=269.05 Aligned_cols=222 Identities=27% Similarity=0.380 Sum_probs=194.4
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--CC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KK 83 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~ 83 (236)
..+...++|+++..+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|++.... ..
T Consensus 241 ~~~~~~~~d~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 319 (549)
T PRK07788 241 SRVPFRAGETTLLPAPMFHATGW-AHLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAK 319 (549)
T ss_pred hhCCCCcCCeEEEccchHHHHHH-HHHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCC
Confidence 34567788999999999999999 5677899999999999889999999999999999999999999999887654 45
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
..++++|.++++|+++++++.++|.+.++ ..+++ .||+||++..+.... .+....++.+|+|.++++++++| ++++
T Consensus 320 ~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~l~~-~YG~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d-~~~~ 395 (549)
T PRK07788 320 YDTSSLKIIFVSGSALSPELATRALEAFG-PVLYN-LYGSTEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILD-ENGN 395 (549)
T ss_pred CCCCceeEEEEeCCCCCHHHHHHHHHHhC-cccee-ccCcchhchhhccCh-hhhhhcCCCcccCCCCcEEEEEC-CCcC
Confidence 56789999999999999999999999987 67888 999999986655432 22234457899999999999999 5789
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+++++.++.+|++++.. .. .+|||+|||+++++++|.+++.||.||+||++|++|+|.|
T Consensus 396 ~~~~g~~Gel~v~g~~~~~gY~~~~~~---~~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~e 464 (549)
T PRK07788 396 EVPRGVVGRIFVGNGFPFEGYTDGRDK---QI-IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAE 464 (549)
T ss_pred CCCCCCeEEEEEeCCCccccccCCCcc---cc-cCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHH
Confidence 999999999999999999999988765 12 4789999999999999999999999999999999999965
No 13
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.1e-37 Score=269.98 Aligned_cols=223 Identities=29% Similarity=0.466 Sum_probs=193.1
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--CC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KK 83 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~ 83 (236)
..++..++|+++..+|++|..|+ ..++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|++.... ..
T Consensus 206 ~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 284 (563)
T PLN02860 206 AIVGYGEDDVYLHTAPLCHIGGL-SSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTW 284 (563)
T ss_pred hhcCCCCCCEEEEecCchhhccH-HHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhcc
Confidence 34677889999999999999999 5788999999999999999999999999999999999999999999876432 23
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC---------------------CCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG---------------------SRNI 142 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~---------------------~~~~ 142 (236)
..++++|.++++|+++++++.+.|.+.|++..+++ .||+||++..+........ ....
T Consensus 285 ~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (563)
T PLN02860 285 KVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFS-AYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQG 363 (563)
T ss_pred ccccceeEEEeCCCcCCHHHHHHHHHhcCCCceec-CCCccccCcccccccccccccccchhhhhhhcccccccccccCC
Confidence 46789999999999999999999999997788998 9999999765443211100 1112
Q ss_pred CCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccC
Q 026609 143 GSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIK 222 (236)
Q Consensus 143 ~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~ 222 (236)
..+|+|++++++++++++ +|+.|||+++++.++.+|+++++.+...+..+|||+|||+++++++|.+++.||.|
T Consensus 364 ~~vG~p~~~~~v~i~~~~------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~ 437 (563)
T PLN02860 364 VCVGKPAPHVELKIGLDE------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSN 437 (563)
T ss_pred cccCCccCCcEEEEecCC------CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeeccc
Confidence 357999999999999854 68899999999999999999999998888788999999999999999999999999
Q ss_pred CceeeccEEeecCC
Q 026609 223 ELIKYKGFQVTSNW 236 (236)
Q Consensus 223 d~i~~~G~~i~p~~ 236 (236)
|+||++|++|+|.|
T Consensus 438 d~i~~~G~~v~p~e 451 (563)
T PLN02860 438 DRIKTGGENVYPEE 451 (563)
T ss_pred ceeEECCEEccHHH
Confidence 99999999999975
No 14
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.6e-37 Score=272.16 Aligned_cols=229 Identities=21% Similarity=0.239 Sum_probs=195.2
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
..+++.++|++++.+|++|..|+...++++++.|+++++.+. +++..+++.++++++|.++++|++++.|.+....
T Consensus 267 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 346 (628)
T TIGR02316 267 AIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAA 346 (628)
T ss_pred HhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc
Confidence 346788899999999999999987788999999999999763 4789999999999999999999999999876432
Q ss_pred --CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCC--CCCCCCCCccccCCCcEEEEE
Q 026609 82 --KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSF--AGSRNIGSAGALAPGVEALIV 157 (236)
Q Consensus 82 --~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~--~~~~~~~~~g~p~~~~~~~~~ 157 (236)
...+++++|.++++|+++++++.+++.+.++ ..+++ .||+||++..+...... ......+.+|+|+++++++++
T Consensus 347 ~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~-~~~~~-~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~ 424 (628)
T TIGR02316 347 WLRKHDLSSLHWLFLAGEPLDEPTAHWITDGLG-KPVID-NYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVL 424 (628)
T ss_pred ccccCCccceeEEEEecCCCCHHHHHHHHHHhC-CCEEe-cccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEE
Confidence 3456889999999999999999999999887 77888 99999998544332211 112345778999999999999
Q ss_pred eCCCCCCCCCCCceEEEEecC---ccchhhcCCcccccccc---cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEE
Q 026609 158 SVDTQKPLPPNQLGEIWLRGP---NMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 231 (236)
Q Consensus 158 ~~~~~~~~~~g~~Gel~v~~~---~~~~~~~~~~~~~~~~~---~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 231 (236)
|++++++++.|+.|||++++| +.+.+|+++++.+...+ ..++||+|||++++|+||+++++||.||+||++|++
T Consensus 425 d~~~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~r 504 (628)
T TIGR02316 425 DEATGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHR 504 (628)
T ss_pred ECCCCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEE
Confidence 976899999999999999998 56788999887766543 246799999999999999999999999999999999
Q ss_pred eecCC
Q 026609 232 VTSNW 236 (236)
Q Consensus 232 i~p~~ 236 (236)
|+|.|
T Consensus 505 v~~~e 509 (628)
T TIGR02316 505 LGTRE 509 (628)
T ss_pred eCHHH
Confidence 99975
No 15
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-37 Score=274.58 Aligned_cols=220 Identities=24% Similarity=0.363 Sum_probs=187.3
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhc--------CCcC
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKH--------GLVK 82 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~ 82 (236)
.++|++++.+|++|.+++. ..+.+++.|+++++.+. ++..+++.++++++|+++++|.++..|.+. +...
T Consensus 345 ~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~ 422 (746)
T PTZ00342 345 YNPKTHLSYLPISHIYERV-IAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLK 422 (746)
T ss_pred CCCCeEEEeCcHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHH
Confidence 3568999999999999994 56778999999998865 899999999999999999999999988652 1000
Q ss_pred C----------------------------------CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccccccc
Q 026609 83 K----------------------------------FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSG 128 (236)
Q Consensus 83 ~----------------------------------~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~ 128 (236)
. ...+++|.+++||+++++++.++|+..++ ..+.+ .||+||+++
T Consensus 423 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~-gYGlTEt~~ 500 (746)
T PTZ00342 423 RFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQ-GYGLTETTG 500 (746)
T ss_pred HHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEE-eeccCcccc
Confidence 0 01268999999999999999999999887 88999 999999976
Q ss_pred ccccccCCCCCCCCCCccccC-CCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceE
Q 026609 129 IATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLG 207 (236)
Q Consensus 129 ~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~ 207 (236)
..+..... ....+++|.|+ |+++++++|.++......+..|||+++|+.++.|||++++.+...|+.+|||+|||+|
T Consensus 501 ~~~~~~~~--~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig 578 (746)
T PTZ00342 501 PIFVQHAD--DNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIV 578 (746)
T ss_pred eeeeccCC--CCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEE
Confidence 65544332 34568899998 9999999985554444555679999999999999999999999999889999999999
Q ss_pred EEcCCCcEEEEcccCCceee-ccEEeecCC
Q 026609 208 YFDGDGQLYVVDRIKELIKY-KGFQVTSNW 236 (236)
Q Consensus 208 ~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~ 236 (236)
++|+||+++++||++|+||+ +|++|+|+|
T Consensus 579 ~~d~dG~l~i~gR~kdlIkls~Ge~I~p~e 608 (746)
T PTZ00342 579 QINKNGSLTFLDRSKGLVKLSQGEYIETDM 608 (746)
T ss_pred EECCCCeEEEEccCCCeEEeCCCEEEchHH
Confidence 99999999999999999996 799999975
No 16
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-37 Score=272.88 Aligned_cols=224 Identities=25% Similarity=0.338 Sum_probs=192.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC--CC----HHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FD----LEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
+....+|++++..|++|+.++ ..++.++..|+++++.+. +. +..+++.++++++|.+.++|++++.|++....
T Consensus 291 ~~~~~~d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 369 (647)
T PTZ00237 291 IEKDIPTVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPE 369 (647)
T ss_pred cCCCCCcEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcc
Confidence 456678999999999999776 568899999999999763 12 68899999999999999999999999875321
Q ss_pred -----CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEE
Q 026609 82 -----KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALI 156 (236)
Q Consensus 82 -----~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~ 156 (236)
...+++++|.++++|+++++++.+++.+.++ ..+.+ .||+||++........ ......+.+|+|++++++++
T Consensus 370 ~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g-~~i~~-~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i 446 (647)
T PTZ00237 370 ATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLK-IKSSR-GYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSI 446 (647)
T ss_pred ccccccccCcchheEEEecCccCCHHHHHHHHHhcC-CCEEe-eechHHhChhhhccCC-CCCCCCCCCccCcCCceEEE
Confidence 3446889999999999999999999999987 88888 9999999865543222 11233478999999999999
Q ss_pred EeCCCCCCCCCCCceEEEEecC---ccchhhcCCcccccccccC-CCeEecCceEEEcCCCcEEEEcccCCceeeccEEe
Q 026609 157 VSVDTQKPLPPNQLGEIWLRGP---NMMRGYYNNEQATKLTIDK-KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 232 (236)
Q Consensus 157 ~~~~~~~~~~~g~~Gel~v~~~---~~~~~~~~~~~~~~~~~~~-~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 232 (236)
+| ++|++++.|+.|||++++| +++.+||++++.+...|.. +|||+|||++++|++|++++.||+||+||++|+||
T Consensus 447 ~d-~~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI 525 (647)
T PTZ00237 447 LS-EDGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKV 525 (647)
T ss_pred EC-CCCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEe
Confidence 99 5899999999999999985 7889999999888876643 68999999999999999999999999999999999
Q ss_pred ecCC
Q 026609 233 TSNW 236 (236)
Q Consensus 233 ~p~~ 236 (236)
+|.|
T Consensus 526 ~p~e 529 (647)
T PTZ00237 526 QLNT 529 (647)
T ss_pred CHHH
Confidence 9975
No 17
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=5.5e-37 Score=264.92 Aligned_cols=225 Identities=24% Similarity=0.351 Sum_probs=200.0
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++..++|++++.+|++|..|+...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|..........+
T Consensus 232 ~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~ 311 (547)
T PRK13295 232 RLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPV 311 (547)
T ss_pred HhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCc
Confidence 35678899999999999999987889999999999999988999999999999999999999999999988776666778
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+++.+.++ ..+++ .||+||++.++..............+|+|.++++++++| +++++++
T Consensus 312 ~~l~~~~~~G~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~ 388 (547)
T PRK13295 312 SSLRTFLCAGAPIPGALVERARAALG-AKIVS-AWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLP 388 (547)
T ss_pred ccceEEEEecCCCCHHHHHHHHHHhC-CCeEE-eccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCC
Confidence 89999999999999999999999985 88999 999999987665443221123345789999999999999 5788999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+++++.++.+|+++++.+... .+|||+|||+++++++|++++.||.||++|++|++|+|.|
T Consensus 389 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~ 456 (547)
T PRK13295 389 AGQIGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVE 456 (547)
T ss_pred CCCCCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHH
Confidence 9999999999999999999998887665 5789999999999999999999999999999999999864
No 18
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-37 Score=270.12 Aligned_cols=228 Identities=29% Similarity=0.411 Sum_probs=196.7
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc-
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV- 81 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~- 81 (236)
.++..++|++++.+|++|..++...++.++..|+++++.+. +++..+++.++++++|++.++|++++.|++....
T Consensus 281 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 360 (637)
T PRK00174 281 VFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEH 360 (637)
T ss_pred ccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcc
Confidence 45778889999999999999987789999999999999753 4799999999999999999999999999886532
Q ss_pred -CCCCCCCceEEeecCCCCCHHHHHHHHHhCCC--CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe
Q 026609 82 -KKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 82 -~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~--~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 158 (236)
...+++++|.++++|+++++++.+++.+.++. ..+++ .||+||++.............+++.+|+|+++++++++|
T Consensus 361 ~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d 439 (637)
T PRK00174 361 PKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVD-TWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD 439 (637)
T ss_pred cccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEe-cccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC
Confidence 23467899999999999999999999998863 57888 999999987655432221233457899999999999999
Q ss_pred CCCCCCCCCCCceEEEEec--CccchhhcCCcccccccc--cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeec
Q 026609 159 VDTQKPLPPNQLGEIWLRG--PNMMRGYYNNEQATKLTI--DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 234 (236)
Q Consensus 159 ~~~~~~~~~g~~Gel~v~~--~~~~~~~~~~~~~~~~~~--~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p 234 (236)
+++++++.|+.|||++++ ++++.+||++++.+...+ ..+|||+|||+++++++|.+++.||+||+||++|++|+|
T Consensus 440 -~~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p 518 (637)
T PRK00174 440 -EEGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGT 518 (637)
T ss_pred -CCCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECH
Confidence 678999999999999999 689999999998776655 246899999999999999999999999999999999999
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 519 ~e 520 (637)
T PRK00174 519 AE 520 (637)
T ss_pred HH
Confidence 75
No 19
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-37 Score=266.12 Aligned_cols=226 Identities=32% Similarity=0.534 Sum_probs=201.8
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++..++|++++.+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..++........++
T Consensus 225 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~ 304 (546)
T PRK08314 225 WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDL 304 (546)
T ss_pred hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCc
Confidence 45678899999999999999998888999999999999999999999999999999999999999999988765556678
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+++.+.++ ..+++ .||+||++......... ......+|+|+++++++++|++++++++
T Consensus 305 ~~l~~~~~gG~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~~~~~ 380 (546)
T PRK08314 305 SSLRYIGGGGAAMPEAVAERLKELTG-LDYVE-GYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETLEELP 380 (546)
T ss_pred hhhheeeeccccCCHHHHHHHHHHcC-CcEEe-cccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCCcCCC
Confidence 89999999999999999999999987 78888 99999998766543322 2345679999999999999988899999
Q ss_pred CCCceEEEEecCccchhhcCCccccccccc---CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTID---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|..|||+++++.++.+|+++++.+...|. ..+||+|||+++++++|.+++.||+||+|+++|++|+|.|
T Consensus 381 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~e 453 (546)
T PRK08314 381 PGEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAE 453 (546)
T ss_pred CCCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHH
Confidence 999999999999999999999888776662 2359999999999999999999999999999999999875
No 20
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-37 Score=261.97 Aligned_cols=225 Identities=32% Similarity=0.480 Sum_probs=200.2
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++..++|++++.+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|.+.++|++++.+++........+
T Consensus 184 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 263 (496)
T PRK06839 184 AIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNL 263 (496)
T ss_pred HcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCC
Confidence 45677889999999999999997777889999999999888999999999999999999999999999998876666678
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+.+.+. +..+.+ .||+||++...............+.+|+|+++++++++|+ .++.++
T Consensus 264 ~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~ 339 (496)
T PRK06839 264 QSVRWFYNGGAPCPEELMREFIDR--GFLFGQ-GFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDE-NKNKVE 339 (496)
T ss_pred cccceEEECCCCCCHHHHHHHHHh--CCeeEe-eccCCCCCcceEecccccccccCCCCcccCCCceEEEECC-CcCCCC
Confidence 899999999999999999999887 478888 9999999876554333323445678999999999999995 666799
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+|+++.++.+|+++++.+...+ .+|||+|||+++++++|.+++.||.||+|+.+|++|+|.|
T Consensus 340 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 408 (496)
T PRK06839 340 VGEVGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLE 408 (496)
T ss_pred CCCceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHH
Confidence 99999999999999999999998887776 6899999999999999999999999999999999999964
No 21
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.5e-37 Score=273.21 Aligned_cols=225 Identities=28% Similarity=0.424 Sum_probs=188.4
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc----
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV---- 81 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---- 81 (236)
..++..++|++++.+|++|.+++. .++.++..|+++++.+. ++..+++.++++++|+++++|++++.+.+....
T Consensus 255 ~~~~~~~~d~~l~~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~ 332 (651)
T PLN02736 255 LSTKFYPSDVHISYLPLAHIYERV-NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKE 332 (651)
T ss_pred hccCCCCCCEEEEeCCHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhc
Confidence 345677899999999999999994 67788999999988764 788999999999999999999999887653100
Q ss_pred ------------------------CC-------------CCC-CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccc
Q 026609 82 ------------------------KK-------------FDL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGL 123 (236)
Q Consensus 82 ------------------------~~-------------~~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~ 123 (236)
.. ..+ +++|.+++||+++++++.+++.+.++ ..+++ .||+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~-~YG~ 410 (651)
T PLN02736 333 SGGLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLE-GYGM 410 (651)
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEE-Eech
Confidence 00 011 47999999999999999999998887 78888 9999
Q ss_pred cccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC---CCCCCceEEEEecCccchhhcCCcccccccccCCCe
Q 026609 124 TETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP---LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGW 200 (236)
Q Consensus 124 tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~---~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (236)
||++..++..... ....+.+|+|+|+++++++|.++++. ..++..|||+++|+.++.||+++++.+...|..+||
T Consensus 411 TE~~~~~~~~~~~--~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw 488 (651)
T PLN02736 411 TETSCVISGMDEG--DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGW 488 (651)
T ss_pred HHhchheeccCCC--CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCC
Confidence 9998766543332 34567899999999999998544322 233457999999999999999999999998878999
Q ss_pred EecCceEEEcCCCcEEEEcccCCceee-ccEEeecCC
Q 026609 201 VHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 236 (236)
Q Consensus 201 ~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~ 236 (236)
|+|||+|++|+||+++|.||+||+||+ +|++|+|+|
T Consensus 489 ~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~e 525 (651)
T PLN02736 489 LHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEK 525 (651)
T ss_pred eeccceEEEcCCCcEEEEEechhheEcCCCcEechHH
Confidence 999999999999999999999999997 799999975
No 22
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.9e-37 Score=286.47 Aligned_cols=229 Identities=31% Similarity=0.455 Sum_probs=202.4
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
+.++..++|++++.+|++|..|+...++.++..|+++++.+ .+++..+++.++++++|.+.++|++++.+.+.......
T Consensus 816 ~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 895 (1146)
T PRK08633 816 DVFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPL 895 (1146)
T ss_pred HhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcc
Confidence 44567889999999999999999777889999999999876 47899999999999999999999999999887665666
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC--------CCCCCCCccccCCCcEEEE
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA--------GSRNIGSAGALAPGVEALI 156 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~--------~~~~~~~~g~p~~~~~~~~ 156 (236)
+++++|.++++|+++++++.+.+++.++ .++.+ .||+||++.++....... ...+...+|+|.|++++++
T Consensus 896 ~~~~lr~~~~gg~~~~~~~~~~~~~~~g-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i 973 (1146)
T PRK08633 896 MFASLRLVVAGAEKLKPEVADAFEEKFG-IRILE-GYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRI 973 (1146)
T ss_pred cCCCeeeEEEcCCcCCHHHHHHHHHHhC-CCeec-ccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEE
Confidence 7899999999999999999999999986 88988 999999987665432211 1234568999999999999
Q ss_pred EeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccC---CCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 157 VSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK---KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 157 ~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
+|++++++++.|+.|||+++|+.++.||+++++.+...+.. ++||+|||++++|+||++++.||.||+||++|++|+
T Consensus 974 ~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~ 1053 (1146)
T PRK08633 974 VDPETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVP 1053 (1146)
T ss_pred EcCCCCccCCCCCceEEEEcCCCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEEC
Confidence 99888999999999999999999999999999988777632 389999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 1054 ~~e 1056 (1146)
T PRK08633 1054 LGA 1056 (1146)
T ss_pred HHH
Confidence 975
No 23
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=7.1e-37 Score=268.06 Aligned_cols=227 Identities=29% Similarity=0.509 Sum_probs=193.9
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC--C-C---HHHHHHHHHhcCceEEEeChHHHHHHHhc
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F-D---LEMFLRAIEKHRVTHIWVVPPLILALAKH 78 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~-~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 78 (236)
.+.++..++|++++.+|++|..++...++.++..|+++++.++ + + ...+++.++++++|.+.++|+++..|++.
T Consensus 246 ~~~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 325 (632)
T PRK07529 246 ALLLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQV 325 (632)
T ss_pred HHhcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhC
Confidence 3445678899999999999999998889999999999999763 2 1 36899999999999999999999999887
Q ss_pred CCcCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe
Q 026609 79 GLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 79 ~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 158 (236)
+. ...+++++|.+++||+++++++.++|.+.++ ..+++ .||+||++.++..... ......+.+|.|+|+..++++.
T Consensus 326 ~~-~~~~~~slr~v~~gg~~l~~~l~~~~~~~~g-~~l~~-~YG~TE~~~~~~~~~~-~~~~~~~svG~~~p~~~v~i~~ 401 (632)
T PRK07529 326 PV-DGHDISSLRYALCGAAPLPVEVFRRFEAATG-VRIVE-GYGLTEATCVSSVNPP-DGERRIGSVGLRLPYQRVRVVI 401 (632)
T ss_pred cc-cCCCccceEEEEEcCCCCCHHHHHHHHHHhC-CcEee-eecccccCcccccCCc-cccccCCCcccccCCceEEEEE
Confidence 64 3347889999999999999999999999986 88999 9999999877654432 2234567899999999998863
Q ss_pred C-CCC---CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeec
Q 026609 159 V-DTQ---KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 234 (236)
Q Consensus 159 ~-~~~---~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p 234 (236)
. +++ ++++.|+.|||+|+|+.++.+|++++ .+...+..++||+|||++++++||++++.||.||+||++|++|+|
T Consensus 402 ~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~-~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p 480 (632)
T PRK07529 402 LDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA-HNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDP 480 (632)
T ss_pred cCCCCcccccCCCCCceEEEEECCCccccccCCc-cccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECH
Confidence 2 345 78999999999999999999999765 455555578999999999999999999999999999999999999
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 481 ~e 482 (632)
T PRK07529 481 AA 482 (632)
T ss_pred HH
Confidence 75
No 24
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-37 Score=261.00 Aligned_cols=227 Identities=31% Similarity=0.482 Sum_probs=202.3
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++...+|+++...|++|.+++....+.+++.|+++++.+.+++..+++.++++++|.+.++|+++..++........++
T Consensus 184 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~ 263 (497)
T PRK06145 184 ALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDL 263 (497)
T ss_pred hhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcccccc
Confidence 45678889999999999999997777888999999999999999999999999999999999999999988766566677
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+.+.+.+++..+++ .||+||++..+............+.+|+|+++++++++| +++++++
T Consensus 264 ~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~ 341 (497)
T PRK06145 264 DSLAWCIGGGEKTPESRIRDFTRVFTRARYID-AYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRWLP 341 (497)
T ss_pred ccceEEEecCCCCCHHHHHHHHHHcCCCceEE-eecCcccCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCCCC
Confidence 89999999999999999999999998788888 999999987655433222233456789999999999999 5788999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+++|+.++.||+++++.+...| .++||+|||+++++++|++++.||+||+||++|++|+|+|
T Consensus 342 ~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ 410 (497)
T PRK06145 342 PNMKGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSE 410 (497)
T ss_pred CCCceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHH
Confidence 99999999999999999999999888877 6789999999999999999999999999999999999864
No 25
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.1e-37 Score=262.12 Aligned_cols=229 Identities=35% Similarity=0.584 Sum_probs=204.9
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++..++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|.+........
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 279 (513)
T PRK07656 200 EYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAED 279 (513)
T ss_pred HhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCC
Confidence 45677889999999999999999888999999999999988889999999999999999999999999999987766668
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC-CCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
++++|.++++|+++++++.+.|.+.++...+++ .||+||++.+...+.... .......+|.|.++++++++| +.+++
T Consensus 280 ~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~ 357 (513)
T PRK07656 280 LSSLRLAVTGAASMPVALLERFESELGVDIVLT-GYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEE 357 (513)
T ss_pred ccceeeEEecCCCCCHHHHHHHHHHcCCCceEe-EEccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCC
Confidence 889999999999999999999999998337888 999999987776544322 112257899999999999999 57899
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.|+.|||+++++.++.+|++++..+...+..++||+|||+++++++|.+++.||.||+++++|.+++|.|
T Consensus 358 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~ 429 (513)
T PRK07656 358 VPVGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAE 429 (513)
T ss_pred CCCCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHH
Confidence 999999999999999999999999888887766899999999999999999999999999999999999864
No 26
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=5.2e-37 Score=262.32 Aligned_cols=225 Identities=17% Similarity=0.167 Sum_probs=183.5
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC--cCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VKK 83 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~ 83 (236)
.+++.++|++++.+|++|..++ ..++.+++.|+++++.+. +++..+++.++++++|++.++|+++..|++... ...
T Consensus 154 ~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~ 232 (499)
T PLN03051 154 HMDIQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEG 232 (499)
T ss_pred hcCCCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcccccc
Confidence 4567889999999999999998 578889999999999874 788999999999999999999999999987653 334
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCC-CCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 162 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~ 162 (236)
.+++++|.++++|+++++++.+++.+.++ +..+.+ .||+||++......... .....+++|+|.++++++++| +++
T Consensus 233 ~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~ivd-~~g 309 (499)
T PLN03051 233 LDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIE-YCGGTELASGYISSTLL-QPQAPGAFSTASLGTRFVLLN-DNG 309 (499)
T ss_pred CCchhheEEEecCCCCCHHHHHHHHHhccccceeEe-eeccccccceeeccccc-CCCCCccccCCCCCceEEEEC-CCC
Confidence 56789999999999999999988777432 256777 99999986543322111 123456899999999999999 578
Q ss_pred CCCCCC--CceEEEEecCcc--chhhcCCccccccccc--------CCCeEecCceEEEcCCCcEEEEcccCCceeeccE
Q 026609 163 KPLPPN--QLGEIWLRGPNM--MRGYYNNEQATKLTID--------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGF 230 (236)
Q Consensus 163 ~~~~~g--~~Gel~v~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~ 230 (236)
++++.| +.|||+++|+.+ +.+|++++. +...++ ...||+|||++++|+||+++++||+||+||++|+
T Consensus 310 ~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~ 388 (499)
T PLN03051 310 VPYPDDQPCVGEVALAPPMLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGI 388 (499)
T ss_pred CCCCCCCCcceEEEEecCcCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCE
Confidence 899988 479999999976 578997643 222221 1127999999999999999999999999999999
Q ss_pred EeecCC
Q 026609 231 QVTSNW 236 (236)
Q Consensus 231 ~i~p~~ 236 (236)
||+|.|
T Consensus 389 ~v~p~E 394 (499)
T PLN03051 389 KTSSVE 394 (499)
T ss_pred ECCHHH
Confidence 999976
No 27
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=1.2e-36 Score=262.27 Aligned_cols=225 Identities=21% Similarity=0.287 Sum_probs=197.3
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++..++|++++.+|++|..|+...++.+++.|+++++.+.+++..+++.+++++++.+.++|+++..+.+........+
T Consensus 230 ~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~ 309 (538)
T TIGR03208 230 RLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPV 309 (538)
T ss_pred hcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCC
Confidence 45677889999999999999987888999999999999988999999999999999999999999999887654445577
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+++.+.++ ..+++ .||+||++.+...............+|+|.++++++++| +++++++
T Consensus 310 ~~l~~~~~gG~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~ 386 (538)
T TIGR03208 310 PSLFTFLCAGAPIPGILVERAWELLG-ALIVS-AWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLS 386 (538)
T ss_pred CcceEEEEcCCCCCHHHHHHHHHHcC-CeEEe-eeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCc
Confidence 89999999999999999999999886 78888 999999987765443221122245689999999999999 5788999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+++++.++.+|+++++.+. ...++||+|||+++++++|.+++.||.||+|+++|++|+|.|
T Consensus 387 ~g~~Gel~v~g~~~~~gy~~~~~~~~--~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~e 454 (538)
T TIGR03208 387 QGETGRLLVRGCSNFGGYLKRPHLNS--TDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVE 454 (538)
T ss_pred CCCCcEEEEecCcccccccCCccccc--ccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHH
Confidence 99999999999999999999987764 346899999999999999999999999999999999999975
No 28
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.3e-36 Score=263.24 Aligned_cols=230 Identities=29% Similarity=0.475 Sum_probs=203.9
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEE-cCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIIL-MAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~-~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..+++.++|+++..+|++|..|+...++.++..|+++++ .+.+++..+++.++++++|.++++|+++..++........
T Consensus 233 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~ 312 (559)
T PRK08315 233 EAMKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARF 312 (559)
T ss_pred HhcCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCC
Confidence 456788899999999999999998889999999999995 4468999999999999999999999999999887665666
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC-CCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
.++++|.++++|+++++++.+.+.+.++...+++ .||+||++.++....... .......+|+|++++.++++|+++++
T Consensus 313 ~~~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~-~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~ 391 (559)
T PRK08315 313 DLSSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTI-AYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGE 391 (559)
T ss_pred CchhhheeEecCCCCCHHHHHHHHHHcCCcceeE-EEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCC
Confidence 7889999999999999999999999998566888 999999988766543322 12346789999999999999977699
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+++++.++.+|++++..+...+..++||+|||+++++++|.+++.||.||+++++|++|+|.|
T Consensus 392 ~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~e 464 (559)
T PRK08315 392 TVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPRE 464 (559)
T ss_pred cCCCCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHH
Confidence 9999999999999999999999999888877767899999999999999999999999999999999999864
No 29
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-36 Score=261.46 Aligned_cols=227 Identities=33% Similarity=0.492 Sum_probs=204.3
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
..++.++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+.+.......++
T Consensus 206 ~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 285 (523)
T PRK08316 206 AGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDL 285 (523)
T ss_pred HhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCc
Confidence 45678889999999999999997677788999999999988899999999999999999999999999998876666778
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+.++.++.+.+++.+++..+++ .||+||++.++............+.+|+|+++++++++| +++++++
T Consensus 286 ~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~ 363 (523)
T PRK08316 286 SSLRKGYYGASIMPVEVLKELRERLPGLRFYN-CYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVA 363 (523)
T ss_pred ccceEEEEcCCcCCHHHHHHHHHHcCCCceee-eecccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCC
Confidence 89999999999999999999999987688888 999999998776644333344567899999999999999 5689999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+++++.++.+|+++++.+...| .++||+|||+++++++|.+++.||.||+|+++|++|+|.|
T Consensus 364 ~g~~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~ 432 (523)
T PRK08316 364 PGEVGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASRE 432 (523)
T ss_pred CCCcceEEEECCchhhhhcCCHHHHHHHh-hCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHH
Confidence 99999999999999999999998888777 6899999999999999999999999999999999999864
No 30
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-36 Score=263.29 Aligned_cols=226 Identities=30% Similarity=0.427 Sum_probs=198.4
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC--cC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VK 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~ 82 (236)
..+++.++|++++..|++|.+|+...++.++..|+++++.+ .+++..+++.++++++|+++++|++++.|++... ..
T Consensus 239 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 318 (570)
T PRK04319 239 YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVK 318 (570)
T ss_pred HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccc
Confidence 34667889999999999999998788999999999999876 5899999999999999999999999999987643 23
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 162 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~ 162 (236)
..+++++|.++++|+++++++.+++.+.++ ..+.+ .||+||++.++...... ....++.+|+|+++++++++| +++
T Consensus 319 ~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~i~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d-~~~ 394 (570)
T PRK04319 319 KYDLSSLRHILSVGEPLNPEVVRWGMKVFG-LPIHD-NWWMTETGGIMIANYPA-MDIKPGSMGKPLPGIEAAIVD-DQG 394 (570)
T ss_pred cCCcccceEEEEcccCCCHHHHHHHHHHhC-CCeEe-ceeecccCCEEEecCCC-CCCCCCcCcCCCCCCEEEEEC-CCC
Confidence 446789999999999999999999999887 78888 99999998765432221 234567899999999999999 577
Q ss_pred CCCCCCCceEEEEec--CccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 163 KPLPPNQLGEIWLRG--PNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 163 ~~~~~g~~Gel~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.+++.|+.|||++++ +.++.+|+++++.+...+ .+|||+|||+++++++|++++.||+||+|+++|++|+|.|
T Consensus 395 ~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~-~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~e 469 (570)
T PRK04319 395 NELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESYF-AGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFE 469 (570)
T ss_pred CCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhhh-cCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHH
Confidence 888999999999987 889999999999988887 5889999999999999999999999999999999999975
No 31
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=3e-36 Score=259.26 Aligned_cols=227 Identities=26% Similarity=0.380 Sum_probs=198.6
Q ss_pred eeccCCCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
......++|++++.+|++|.+++.. .++.++..|+++++.+.+++..+++.+++++++++.++|+++..+++...+...
T Consensus 217 ~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~ 296 (527)
T TIGR02275 217 EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRY 296 (527)
T ss_pred hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCC
Confidence 3456778899999999999999854 478899999999998888999999999999999999999999999887766667
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCC-CcEEEEEeCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAP-GVEALIVSVDTQK 163 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~-~~~~~~~~~~~~~ 163 (236)
.++++|.++++|+++++++.+++.+.++ ..+.+ .||+||++...... ..........+|+|++ +..++++| ++++
T Consensus 297 ~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~~-~YG~tE~~~~~~~~-~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~ 372 (527)
T TIGR02275 297 DLSSLKLLQVGGAKFSEAAARRVPAVFG-CQLQQ-VFGMAEGLVNYTRL-DDPAEIIFTTQGRPMSPDDEVRVVD-DHGN 372 (527)
T ss_pred CccceEEEEEcCCCCCHHHHHHHHHHhC-CeEEe-eeccCccCccccCC-CCccccccccCCCCCCCCceEEEEC-CCCC
Confidence 7889999999999999999999999987 88988 99999965433221 1111234467899994 78999999 5789
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+++|+.++.+|+++++.+...+..+|||+|||+++++++|++++.||.||+|+++|++|+|.|
T Consensus 373 ~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~e 445 (527)
T TIGR02275 373 PVAPGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEE 445 (527)
T ss_pred CCCCCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHH
Confidence 9999999999999999999999999999888878899999999999999999999999999999999999865
No 32
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4e-36 Score=260.07 Aligned_cols=229 Identities=31% Similarity=0.510 Sum_probs=202.6
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..++..++|++++.+|++|.+|....++.++..|+++++.. .+++..+++.++++++|.+.++|+++..+++.......
T Consensus 235 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~ 314 (558)
T PRK12583 235 ESLGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNF 314 (558)
T ss_pred HHhCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCC
Confidence 34567889999999999999999888999999999999754 57899999999999999999999999988877655666
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC-CCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
+++++|.++++|+++++++.+++.+.++...+.+ .||+||++.++....... .......+|+|.+++.++++|++ ++
T Consensus 315 ~~~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~ 392 (558)
T PRK12583 315 DLSSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQI-AYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GA 392 (558)
T ss_pred CchhheEEEecCCCCCHHHHHHHHHHcCCcceec-cccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CC
Confidence 7899999999999999999999999998667887 999999998776543221 13345788999999999999965 89
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+++++.++.+|++++..+...+..++||+|||+++++++|++++.||.||+|+++|++|+|.|
T Consensus 393 ~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~ 465 (558)
T PRK12583 393 TVPRGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPRE 465 (558)
T ss_pred CCCCCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHH
Confidence 9999999999999999999999999988887767899999999999999999999999999999999999864
No 33
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.2e-36 Score=267.59 Aligned_cols=221 Identities=27% Similarity=0.424 Sum_probs=180.3
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcC----------
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG---------- 79 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------- 79 (236)
..++|++++.+|++|.++... .+.+++.|+++++.+ +++..+++.++++++|+++++|++++.|.+..
T Consensus 263 ~~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~ 340 (660)
T PLN02861 263 ATEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGML 340 (660)
T ss_pred CCCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHH
Confidence 467899999999999999854 556899999998874 68999999999999999999999999886410
Q ss_pred ---------------------------CcCCC-------CC-CCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccc
Q 026609 80 ---------------------------LVKKF-------DL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLT 124 (236)
Q Consensus 80 ---------------------------~~~~~-------~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~t 124 (236)
..... .+ .++|.+++||+++++++. .|.+.++...+++ .||+|
T Consensus 341 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~-~YG~T 418 (660)
T PLN02861 341 RKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQ-GYGLT 418 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeE-ecchh
Confidence 00000 11 478999999999999975 4666666446788 99999
Q ss_pred ccccccccccCCCCCCCCCCccccCCCcEEEEEeC-CCC-CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEe
Q 026609 125 ETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQ-KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVH 202 (236)
Q Consensus 125 E~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~-~~~-~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (236)
|+++.++..... .....+++|+|+++++++++|. +.| ..++++..|||+++|+.++.|||++++.+...| .+|||+
T Consensus 419 E~~~~~~~~~~~-~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~ 496 (660)
T PLN02861 419 ESCGGCFTSIAN-VFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFH 496 (660)
T ss_pred hhhhceeecccc-cCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcc
Confidence 997655433222 1234678999999999999983 334 445567789999999999999999999999888 689999
Q ss_pred cCceEEEcCCCcEEEEcccCCceee-ccEEeecCC
Q 026609 203 TGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 236 (236)
Q Consensus 203 TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~ 236 (236)
|||+|++|+||+++|.||+||+||+ +|++|+|+|
T Consensus 497 TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~e 531 (660)
T PLN02861 497 TGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVEN 531 (660)
T ss_pred cCceEEECCCCcEEEEeccccceEcCCCeEEcHHH
Confidence 9999999999999999999999997 799999975
No 34
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=5.2e-36 Score=258.81 Aligned_cols=224 Identities=42% Similarity=0.753 Sum_probs=196.4
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC--Cc
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS--SL 89 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~--~l 89 (236)
..++.+.++|++|.+|+...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+++........++ .+
T Consensus 226 ~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l 305 (546)
T PLN02330 226 GQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKL 305 (546)
T ss_pred CceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchhee
Confidence 3468999999999999977788999999999999999999999999999999999999999999887654444444 47
Q ss_pred eEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC---CCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 90 KLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
|.++++|++++++++++|.+.|++..+++ .||+||++.+........ .......+|+|+++++++++|++++++++
T Consensus 306 ~~i~~~g~~l~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p 384 (546)
T PLN02330 306 QAIMTAAAPLAPELLTAFEAKFPGVQVQE-AYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLP 384 (546)
T ss_pred eeEEEcCCcCCHHHHHHHHHHcCCCeEEe-cccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCC
Confidence 89999999999999999999997688999 999999986654322111 12334578999999999999988899999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+++++.++.+|+++++.+...++.+|||+|||++++++||.+++.||.+|+|+++|++|+|.|
T Consensus 385 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~ 454 (546)
T PLN02330 385 KNTPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAE 454 (546)
T ss_pred CCCceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHH
Confidence 9999999999999999999999988888878899999999999999999999999999999999999864
No 35
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=4e-36 Score=257.05 Aligned_cols=225 Identities=31% Similarity=0.472 Sum_probs=200.8
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++..++|++++.+|++|..|+...++.++..|+++++.+..++..+++.++ ++|.+.++|+++..+++........
T Consensus 190 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~ 267 (504)
T PRK07514 190 DYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREA 267 (504)
T ss_pred HHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCccc
Confidence 34567889999999999999999778889999999999999899999999994 6999999999999998876666667
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
++++|.++.+|+++++++.+.|.+.++ ..+++ .||+||++....... ........+|.|+++++++++|+++++++
T Consensus 268 ~~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~--~~~~~~~~~G~~~~~~~v~i~d~~~~~~~ 343 (504)
T PRK07514 268 AAHMRLFISGSAPLLAETHREFQERTG-HAILE-RYGMTETNMNTSNPY--DGERRAGTVGFPLPGVSLRVTDPETGAEL 343 (504)
T ss_pred ccceeeEEecCCCCCHHHHHHHHHHhC-Cccee-ecccccccccccCCc--cccccCcccccCCCCcEEEEEECCCCCCC
Confidence 889999999999999999999999986 78888 999999986654322 11334567899999999999998889999
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+.|+.|||+++++.++.+|+++++.+...+..++||+|||+++++++|.+++.||+||+||++|++|+|.|
T Consensus 344 ~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~ 414 (504)
T PRK07514 344 PPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKE 414 (504)
T ss_pred CCCCceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHH
Confidence 99999999999999999999999999888877899999999999999999999999999999999999864
No 36
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.1e-36 Score=258.78 Aligned_cols=219 Identities=28% Similarity=0.529 Sum_probs=194.3
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceE
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 91 (236)
.+++++.+|++|.+++...++.++..|++.++.+ +.++..+++.++++++|.++++|+++..+++........++++|.
T Consensus 251 ~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~ 330 (562)
T PRK05677 251 CEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKL 330 (562)
T ss_pred ccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceE
Confidence 4789999999999999777888888888877765 578999999999999999999999999998765444556789999
Q ss_pred EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCce
Q 026609 92 VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLG 171 (236)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~G 171 (236)
++++|+++++++.+.|.+.++ ..+++ .||+||++.+....... ...++.+|+|++++.++++|+ ++++++.|+.|
T Consensus 331 v~~gG~~~~~~~~~~~~~~~~-~~v~~-~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d~-~~~~~~~g~~G 405 (562)
T PRK05677 331 TLSGGMALQLATAERWKEVTG-CAICE-GYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVIDD-DGNELPLGEVG 405 (562)
T ss_pred EEEcCccCCHHHHHHHHHHcC-CCeec-cCCccccCcceeecCcc--CCCCCccCccCCCCEEEEECC-CCCCCCCCCCe
Confidence 999999999999999999886 88998 99999998766543322 334567999999999999994 68899999999
Q ss_pred EEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 172 EIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 172 el~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
||+++++.++.+|+++++.+...|..++||+|||+++++++|.+++.||.+|+|+++|++|+|.|
T Consensus 406 el~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~e 470 (562)
T PRK05677 406 ELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNE 470 (562)
T ss_pred EEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHH
Confidence 99999999999999999999888877899999999999999999999999999999999999975
No 37
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.8e-36 Score=263.59 Aligned_cols=229 Identities=24% Similarity=0.323 Sum_probs=194.1
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC----CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA----KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
..+++.++|++++.+|++|..++...++.++..|+++++.+ .+++..+++.++++++|+++++|++++.|.+....
T Consensus 268 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 347 (629)
T PRK10524 268 TIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPA 347 (629)
T ss_pred HhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcc
Confidence 34677889999999999999998778899999999999976 35789999999999999999999999998876432
Q ss_pred --CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccC--CCCCCCCCCccccCCCcEEEEE
Q 026609 82 --KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENS--FAGSRNIGSAGALAPGVEALIV 157 (236)
Q Consensus 82 --~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~--~~~~~~~~~~g~p~~~~~~~~~ 157 (236)
...+++++|.++++|+++++++.+++.+.++ ..+++ .||+||++........ .......+.+|+|+++++++++
T Consensus 348 ~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~-~~v~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~ 425 (629)
T PRK10524 348 LLRKHDLSSLRALFLAGEPLDEPTASWISEALG-VPVID-NYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLL 425 (629)
T ss_pred cccccChhheeEEEEeCCCCCHHHHHHHHHhcC-CCeEe-ccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEE
Confidence 3446789999999999999999999999987 78888 9999999843322221 1113345788999999999999
Q ss_pred eCCCCCCCCCCCceEEEEecC---ccchhhcCCccccccccc---CCCeEecCceEEEcCCCcEEEEcccCCceeeccEE
Q 026609 158 SVDTQKPLPPNQLGEIWLRGP---NMMRGYYNNEQATKLTID---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 231 (236)
Q Consensus 158 ~~~~~~~~~~g~~Gel~v~~~---~~~~~~~~~~~~~~~~~~---~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 231 (236)
|++++++++.|+.|||+++++ +.+.+|+++++.+...+. .++||+|||+++++++|.+++.||.||+||++|++
T Consensus 426 d~~~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~r 505 (629)
T PRK10524 426 NEVTGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHR 505 (629)
T ss_pred eCCCCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEE
Confidence 965899999999999999997 567899998877655432 46899999999999999999999999999999999
Q ss_pred eecCC
Q 026609 232 VTSNW 236 (236)
Q Consensus 232 i~p~~ 236 (236)
|+|.|
T Consensus 506 i~p~e 510 (629)
T PRK10524 506 LGTRE 510 (629)
T ss_pred eCHHH
Confidence 99965
No 38
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.2e-36 Score=254.59 Aligned_cols=222 Identities=22% Similarity=0.334 Sum_probs=194.6
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++..++|+++...|++|..++ ..++.+++.|+++++.+.+++..+++.++++++|.+.++|+++..|.+... .
T Consensus 177 ~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~ 251 (487)
T PRK07638 177 HDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----V 251 (487)
T ss_pred HhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----c
Confidence 44667889999999999999887 678889999999999999999999999999999999999999999987632 2
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
..+.+.++++|+.+++++.+++.+.+++..+++ .||+||++.++.... .........+|+|++++.++++| ++++++
T Consensus 252 ~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~g~~~ 328 (487)
T PRK07638 252 IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYE-FYGASELSFVTALVD-EESERRPNSVGRPFHNVQVRICN-EAGEEV 328 (487)
T ss_pred CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEE-EecCCccCceEEecc-cccCCCCCCCCcccCCcEEEEEC-CCCCCC
Confidence 345666788999999999999999998788988 999999997766543 22244567899999999999999 578999
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++|+.|||+++++.++.+|+++++.+...+ .+|||+|||+++++++|++++.||++|+||++|++|+|.|
T Consensus 329 ~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~e 398 (487)
T PRK07638 329 QKGEIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEE 398 (487)
T ss_pred CCCCCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHH
Confidence 999999999999999999999987766544 6899999999999999999999999999999999999864
No 39
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.1e-36 Score=259.37 Aligned_cols=221 Identities=33% Similarity=0.511 Sum_probs=198.9
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceE
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 91 (236)
.+|++++.+|++|.+|+...++.+++.|+++++.+.+++..+++.++++++|.+.++|++++.|++........++++|.
T Consensus 261 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 340 (573)
T PRK05605 261 GPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRN 340 (573)
T ss_pred CCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccE
Confidence 46899999999999999777888899999999998889999999999999999999999999999887767778899999
Q ss_pred EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCC-CCCCCCCCc
Q 026609 92 VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT-QKPLPPNQL 170 (236)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~-~~~~~~g~~ 170 (236)
++.+|+++++++.+.|.+.++ ..+++ .||+||++.++...... .....+.+|.|.+++.++++|+++ +++++.|+.
T Consensus 341 i~~gg~~l~~~~~~~~~~~~~-~~i~~-~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~ 417 (573)
T PRK05605 341 AFSGAMALPVSTVELWEKLTG-GLLVE-GYGLTETSPIIVGNPMS-DDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEE 417 (573)
T ss_pred EEECCCcCCHHHHHHHHHHhC-CCeec-ccccchhchhhhcCCcc-cCCcCCccccCCCCCEEEEEcCCCCCccCCCCCe
Confidence 999999999999999999886 78888 99999998876654322 234457899999999999999766 689999999
Q ss_pred eEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 171 GEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 171 Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|||+++++.++.+|+++++.+...| .+|||+|||+++++++|++++.||.||+++++|++|+|.|
T Consensus 418 Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~e 482 (573)
T PRK05605 418 GELLVRGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAE 482 (573)
T ss_pred eEEEEecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHH
Confidence 9999999999999999999888877 5679999999999999999999999999999999999865
No 40
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-36 Score=265.20 Aligned_cols=221 Identities=20% Similarity=0.296 Sum_probs=193.2
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
.++..++|++++.+|++|..++...++.++..|+++++.+ .+++..+++.++++++|.++++|+++..+++... ...
T Consensus 181 ~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~ 258 (705)
T PRK06060 181 ALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDS 258 (705)
T ss_pred hhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--ccc
Confidence 4567888999999999999998777889999999999987 5788889999999999999999999999987543 335
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
++++|.++++|+++++++.+.|.+.+++..+++ .||+||++..+...... ......+|+|+++++++++| ++++++
T Consensus 259 ~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d-~~g~~~ 334 (705)
T PRK06060 259 FRSLRCVVSAGEALELGLAERLMEFFGGIPILD-GIGSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVA-PDGTTA 334 (705)
T ss_pred ccceeEEEEecCcCCHHHHHHHHHHcCCCceEe-eeeccccCceEEeccCC--CCCcCcccccCCCcEEEEEC-CCCCCC
Confidence 789999999999999999999999997788888 99999998665433221 23456789999999999999 478999
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+.|+.|||+|+|+.++.||+++++.+. ..++||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 335 ~~g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~e 402 (705)
T PRK06060 335 GPGVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPRE 402 (705)
T ss_pred CCCCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHH
Confidence 999999999999999999999987653 25789999999999999999999999999999999999875
No 41
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=8.5e-36 Score=253.81 Aligned_cols=222 Identities=33% Similarity=0.483 Sum_probs=194.6
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++..++|++++.+|++|.+++ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+..... ...
T Consensus 176 ~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~ 253 (483)
T PRK03640 176 NLGLTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYP 253 (483)
T ss_pred hcCCCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccC
Confidence 3577889999999999999998 56788999999999999999999999999999999999999999998764433 334
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
.++|.++++|+++++++.+.+++. +..+++ .||+||++..+............+.+|+|++++++++.++ +++++
T Consensus 254 ~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~ 328 (483)
T PRK03640 254 SSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQ-SYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD--GVVVP 328 (483)
T ss_pred CcceEEEEcCCCCCHHHHHHHHHh--CCCeee-eeccCcccccccccCcccccccCCCcccccCCcEEEEecC--CCcCC
Confidence 689999999999999999988875 488998 9999999865544333333455678999999999999883 48899
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+++++.++.+|+++++.+...+ .++||+|||+++++++|.+++.||+||++|.+|++|+|.|
T Consensus 329 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ 397 (483)
T PRK03640 329 PFEEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAE 397 (483)
T ss_pred CCCceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHH
Confidence 99999999999999999999998888777 6889999999999999999999999999999999999864
No 42
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-36 Score=252.95 Aligned_cols=225 Identities=29% Similarity=0.438 Sum_probs=196.9
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
.+.++..++|++++.+|++|..|+...++.++..|+++++.+.+++..+++.++ ++++.+.++|+++..|.+... ...
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~ 238 (471)
T PRK07787 161 AEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AAR 238 (471)
T ss_pred HHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccc
Confidence 345667888999999999999999888999999999999998899999999999 999999999999999987543 234
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
.++++|.++.||++++++++++|.+.++ ..+++ .||+||++........ ....++.+|+|.+++.++++|+ ++++
T Consensus 239 ~l~~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~--~~~~~~~vG~~~~g~~~~i~d~-~~~~ 313 (471)
T PRK07787 239 ALRGARLLVSGSAALPVPVFDRLAALTG-HRPVE-RYGMTETLITLSTRAD--GERRPGWVGLPLAGVETRLVDE-DGGP 313 (471)
T ss_pred cccceeEEEECCCCCCHHHHHHHHHHcC-CCeec-ccCccccCcceecCCC--CcccCCcccccCCCcEEEEECC-CCCC
Confidence 6789999999999999999999999886 78888 9999999865443322 2344678999999999999995 5778
Q ss_pred CC-CCC-ceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEccc-CCceeeccEEeecCC
Q 026609 165 LP-PNQ-LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI-KELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~-~g~-~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~-~d~i~~~G~~i~p~~ 236 (236)
++ +|+ .|||+++|+.++.+|+++++.+...+..++||+|||++++++||.+++.||+ ||+++.+|++|+|.|
T Consensus 314 ~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~e 388 (471)
T PRK07787 314 VPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGE 388 (471)
T ss_pred CCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHH
Confidence 77 454 7999999999999999999999988877899999999999999999999996 899999999999865
No 43
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-35 Score=256.21 Aligned_cols=221 Identities=25% Similarity=0.380 Sum_probs=190.6
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--CCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~ 84 (236)
.+...++|+++..+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|++.... ...
T Consensus 231 ~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~ 309 (537)
T PRK13382 231 RTPWRAEEPTVIVAPMFHAWGF-SQLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRY 309 (537)
T ss_pred hhCCCCCCeEEEecChHhhhHH-HHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccC
Confidence 3456678999999999999999 6788899999999999899999999999999999999999999999876432 233
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
+++++|.++++|+++++++++.|.+.++ ..+++ .||+||++.++...... ....++.+|+|.++++++++| +++++
T Consensus 310 ~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~-~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~~~~~~i~d-~~~~~ 385 (537)
T PRK13382 310 SGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIYN-NYNATEAGMIATATPAD-LRAAPDTAGRPAEGTEIRILD-QDFRE 385 (537)
T ss_pred CccceeEEEEcCCCCCHHHHHHHHHHcC-CcEEe-cccccccCcceecChhH-hccCCCCccccCcCcEEEEEC-CCCCC
Confidence 5568999999999999999999999997 67888 99999998766543221 234567899999999999999 47899
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.|+.|||+++++.++.+|+ ++.+.. + .+|||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 386 ~~~g~~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~e 453 (537)
T PRK13382 386 VPTGEVGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIE 453 (537)
T ss_pred CCCCCeeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHH
Confidence 999999999999999999997 333332 3 4789999999999999999999999999999999999864
No 44
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.6e-36 Score=255.66 Aligned_cols=211 Identities=33% Similarity=0.482 Sum_probs=180.6
Q ss_pred ecc-CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcC----Cc
Q 026609 7 ETA-GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG----LV 81 (236)
Q Consensus 7 ~~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~ 81 (236)
... ..++|+.++++|+.|++...+.....++.|+++... .++..+++.+++.++|.++++|.+|+.+-+.. .+
T Consensus 226 ~~~~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~--~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~ 303 (613)
T COG1022 226 VLPPIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFK--EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAK 303 (613)
T ss_pred hCCCCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEec--CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHh
Confidence 343 789999999999999999965555556666665554 48999999999999999999999888553310 00
Q ss_pred CC-------------------------------------------CCC-CCceEEeecCCCCCHHHHHHHHHhCCCCcee
Q 026609 82 KK-------------------------------------------FDL-SSLKLVGSGAAPLGKELMEECAKNVPSATVI 117 (236)
Q Consensus 82 ~~-------------------------------------------~~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~ 117 (236)
.. ..+ .++|.+++||+++++++.++++.. +.++.
T Consensus 304 ~~~~~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~ 381 (613)
T COG1022 304 APAVRRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPIL 381 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeE
Confidence 00 001 389999999999999999888877 59999
Q ss_pred eccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccC
Q 026609 118 QVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK 197 (236)
Q Consensus 118 ~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~ 197 (236)
. .||+||+.+..+..++. ....+++|.|+|+++++++|+ |||+|+||.++.|||++|+.|.+.|+.
T Consensus 382 e-GYGlTEts~~~~v~~~~--~~~~gtvG~p~p~~evKI~d~-----------GEilVRG~~Vm~GYyk~pe~Taeaf~~ 447 (613)
T COG1022 382 E-GYGLTETSAVVSVNPPD--RFVLGTVGKPLPGIEVKIADD-----------GEILVRGPNVMKGYYKNPEATAEAFTE 447 (613)
T ss_pred E-EecccccccceEEcccc--CcccCCcCCcCCCceEEEccC-----------ceEEEecchhcchhcCChHHHhhhccc
Confidence 9 99999999988876655 567788999999999999983 999999999999999999999999999
Q ss_pred CCeEecCceEEEcCCCcEEEEcccCCceee-ccEEeecC
Q 026609 198 KGWVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 235 (236)
Q Consensus 198 ~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~ 235 (236)
||||+|||+|.++++|++.+.||++|+||+ +|++|.|+
T Consensus 448 DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~ 486 (613)
T COG1022 448 DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPE 486 (613)
T ss_pred cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChH
Confidence 999999999999999999999999999999 89999996
No 45
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.3e-35 Score=256.36 Aligned_cols=227 Identities=28% Similarity=0.407 Sum_probs=199.3
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++..++|++++.+|++|.+|+...++.+++.|+++++.+.+++..+++.+++++++.++++|+.+..+++........
T Consensus 221 ~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~ 300 (547)
T PRK06087 221 ARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPAD 300 (547)
T ss_pred HhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCC
Confidence 34567889999999999999999788999999999999999999999999999999999999888888887776556667
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
++++|.++++|+++++++.+.+.+. +..+++ .||+||++.+................|.|++++.++++| +.++++
T Consensus 301 ~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~ 376 (547)
T PRK06087 301 LSALRFFLCGGTTIPKKVARECQQR--GIKLLS-VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTL 376 (547)
T ss_pred CCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE-EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCC
Confidence 8899999999999999999888775 488998 999999987766433221122345679999999999999 678899
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+.|+.|||+++|+.++.+|+++++.+...+..++||+|||+++++++|+++++||.+|+|+.+|++|+|.|
T Consensus 377 ~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~ 447 (547)
T PRK06087 377 PPGCEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSRE 447 (547)
T ss_pred cCCCcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHH
Confidence 99999999999999999999999998888877899999999999999999999999999999999999864
No 46
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-35 Score=256.86 Aligned_cols=222 Identities=30% Similarity=0.465 Sum_probs=186.1
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-------CCCHHHHHHHHHhcCceEEEeChHHHHHHHhc
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-------KFDLEMFLRAIEKHRVTHIWVVPPLILALAKH 78 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-------~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 78 (236)
..++..++|+.++.+|++|..++ ..|+++++.+ .+++..+++.++++++|+++++|++++.|.+.
T Consensus 208 ~~~~~~~~~~~~~~~pl~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~ 279 (552)
T PRK09274 208 EDYGIEPGEIDLPTFPLFALFGP--------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRY 279 (552)
T ss_pred HHhCCCCCceeeeccCHHHhhhh--------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHH
Confidence 34577888999999999886554 3477777754 35789999999999999999999999999887
Q ss_pred CCcCCCCCCCceEEeecCCCCCHHHHHHHHHhCCC-CceeeccccccccccccccccCC------C--CCCCCCCccccC
Q 026609 79 GLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS-ATVIQVGYGLTETSGIATMENSF------A--GSRNIGSAGALA 149 (236)
Q Consensus 79 ~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~-~~v~~~~YG~tE~g~~~~~~~~~------~--~~~~~~~~g~p~ 149 (236)
......+++++|.++++|+++++++.+++.+.++. ..+++ .||+||++.++...... . .......+|+|+
T Consensus 280 ~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 358 (552)
T PRK09274 280 GEANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILT-PYGATEALPISSIESREILFATRAATDNGAGICVGRPV 358 (552)
T ss_pred hhhcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEc-cccccccceeEeecchhhhccccccccCCCCcccCccC
Confidence 65556688999999999999999999999999963 68888 99999998765532211 0 011223689999
Q ss_pred CCcEEEEEeCC--------CCCCCCCCCceEEEEecCccchhhcCCcccccccc--cCCC--eEecCceEEEcCCCcEEE
Q 026609 150 PGVEALIVSVD--------TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI--DKKG--WVHTGDLGYFDGDGQLYV 217 (236)
Q Consensus 150 ~~~~~~~~~~~--------~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~--~~~~--~~~TgD~~~~~~~g~~~~ 217 (236)
++++++++|++ ++++++.|+.|||+++|+.++.||+++++.+...+ +.+| ||+|||+++++++|++++
T Consensus 359 ~~~~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~ 438 (552)
T PRK09274 359 DGVEVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWF 438 (552)
T ss_pred CCceEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEE
Confidence 99999999852 46789999999999999999999999998887655 3456 999999999999999999
Q ss_pred EcccCCceeeccEEeecCC
Q 026609 218 VDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 218 ~GR~~d~i~~~G~~i~p~~ 236 (236)
.||.||+||++|++|+|+|
T Consensus 439 ~GR~~d~i~~~G~~v~p~e 457 (552)
T PRK09274 439 CGRKAHRVETAGGTLYTIP 457 (552)
T ss_pred EeccCCeEEECCEEECcHH
Confidence 9999999999999999976
No 47
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-35 Score=250.41 Aligned_cols=225 Identities=28% Similarity=0.450 Sum_probs=195.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHH--hcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIE--KHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
....++|++++.+|++|.+|+...+..++..|+++++.+.+++..++..+. ++++|.++++|+++..+.+........
T Consensus 171 ~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 250 (488)
T PRK09088 171 GRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAA 250 (488)
T ss_pred hCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccc
Confidence 456788999999999999999778889999999999988889999988886 489999999999999998776545556
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccccccccccccc-CCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMEN-SFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~-~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
++++|.++++|++++.+..+.+.+. +..+++ .||+||++.+..... +.....+.+.+|.|.++++++++| +++++
T Consensus 251 ~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~-~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~ 326 (488)
T PRK09088 251 LRHLTALFTGGAPHAAEDILGWLDD--GIPMVD-GFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGND 326 (488)
T ss_pred cccceEEEecCCCCCHHHHHHHHHh--CCceee-eecccccccccccCCCcccccccCCccccCCCCcEEEEEC-CCCCC
Confidence 7899999999999999988888765 478888 999999987543211 111123457799999999999998 57889
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.|+.|||+++++.++.+|+++++.+...+..+|||+|||+++++++|.+++.||.||+|+.+|++|+|+|
T Consensus 327 ~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~ 398 (488)
T PRK09088 327 CPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAE 398 (488)
T ss_pred CcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHH
Confidence 999999999999999999999999988888877899999999999999999999999999999999999864
No 48
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-35 Score=255.09 Aligned_cols=221 Identities=39% Similarity=0.700 Sum_probs=195.9
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceE
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 91 (236)
.++++++++|++|.+|+...++.+++.|+++++.+++++..+++.++++++|.+.++|+.+..+++........++++|.
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 327 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRA 327 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhh
Confidence 34689999999999999777778999999999998899999999999999999999999999998876555557789999
Q ss_pred EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCce
Q 026609 92 VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLG 171 (236)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~G 171 (236)
++++|+++++++.+++.+.++ ..+++ .||+||++.+....... ....++.+|+|.+++.+++++++++++++.|+.|
T Consensus 328 v~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~G 404 (563)
T PRK06710 328 CISGSAPLPVEVQEKFETVTG-GKLVE-GYGLTESSPVTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIG 404 (563)
T ss_pred eeeCCCcCCHHHHHHHHHhhC-CCEec-ccccccCccccccCccc-ccccCCccCCCCCCCeEEEEECCCCccCCCCCce
Confidence 999999999999999999886 78888 99999998765432211 1233567899999999999998889999999999
Q ss_pred EEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 172 EIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 172 el~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
||+++++.++.+|+++++.+...+ .+|||+|||+++++++|++++.||.||+|+++|.+|+|.|
T Consensus 405 el~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~e 468 (563)
T PRK06710 405 EIVVKGPQIMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPRE 468 (563)
T ss_pred EEEEecCccchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHH
Confidence 999999999999999998888777 6889999999999999999999999999999999999875
No 49
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4.4e-35 Score=253.88 Aligned_cols=220 Identities=32% Similarity=0.568 Sum_probs=194.4
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceE
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 91 (236)
+++++..+|++|.+++...++..++.|+..++.. +.++..+++.++++++|.+.++|+++..|++.......+++++|.
T Consensus 258 ~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~ 337 (562)
T PRK12492 258 QEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKL 337 (562)
T ss_pred CeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeE
Confidence 3678999999999999777778888888777654 568999999999999999999999999999887666667889999
Q ss_pred EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCce
Q 026609 92 VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLG 171 (236)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~G 171 (236)
++++|+++++++.+.|.+.++ .++++ .||+||++.++...... .....+.+|+|+++++++++| ++++++++|+.|
T Consensus 338 ~~~gG~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~G 413 (562)
T PRK12492 338 TNSGGTALVKATAERWEQLTG-CTIVE-GYGLTETSPVASTNPYG-ELARLGTVGIPVPGTALKVID-DDGNELPLGERG 413 (562)
T ss_pred EEeccccCCHHHHHHHHHHhC-Cceee-ccCccccCceeeecCCc-ccccCCccceecCCCEEEEEC-CCCCCCCCCCce
Confidence 999999999999999999886 88998 99999998876654322 133456789999999999999 478999999999
Q ss_pred EEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 172 EIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 172 el~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
||+++++.++.+|+++++.+...|..++||+|||+++++++|.+++.||.||+|+++|++|+|.|
T Consensus 414 el~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~e 478 (562)
T PRK12492 414 ELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNE 478 (562)
T ss_pred EEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHH
Confidence 99999999999999999998888866899999999999999999999999999999999999865
No 50
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.6e-35 Score=253.29 Aligned_cols=225 Identities=34% Similarity=0.527 Sum_probs=198.0
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++..++|++++.+|++|.+++ .++.+++.|+++++.+.+++..+++.++++++|++.++|+.+..+++........
T Consensus 202 ~~~~~~~~~~~l~~~pl~~~~g~--~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~ 279 (524)
T PRK06188 202 AEWEWPADPRFLMCTPLSHAGGA--FFLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRD 279 (524)
T ss_pred hhcCCCcCcEEEEecCchhhhhH--HHHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCC
Confidence 34567788999999999999887 3578899999999999999999999999999999999999999999887666678
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC----CCCCCCCccccCCCcEEEEEeCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA----GSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~----~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
++++|.++++|++++++..+.+.+.++ ..+.+ .||+||++..+....... .......+|+|+++++++++|+ +
T Consensus 280 l~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~-~ 356 (524)
T PRK06188 280 LSSLETVYYGASPMSPVRLAEAIERFG-PIFAQ-YYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDE-D 356 (524)
T ss_pred CcceeEEEEcCCCCCHHHHHHHHHHhC-chhhh-eeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcC-C
Confidence 899999999999999999999999887 66777 999999976555432211 1234567899999999999994 6
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++.|+.|||+++++.++.+|++++..+...+ .+|||+|||+++++++|.+++.||.+|+++++|++|+|+|
T Consensus 357 ~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~ 430 (524)
T PRK06188 357 GREVAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPRE 430 (524)
T ss_pred CCCCCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeecceEEEcCCccEEEEeccccceecCCEEECHHH
Confidence 8999999999999999999999999998887777 6899999999999999999999999999999999999864
No 51
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.6e-35 Score=253.96 Aligned_cols=227 Identities=26% Similarity=0.381 Sum_probs=196.9
Q ss_pred eeccCCCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcC--CcC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG--LVK 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~ 82 (236)
..++++++|++++.+|++|.+++.. .++.++..|+++++.+.+++..+++.+++++++.+.++|+++..+++.. ...
T Consensus 216 ~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 295 (536)
T PRK10946 216 EICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGS 295 (536)
T ss_pred HhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCc
Confidence 3566788999999999999988754 5788899999999998889999999999999999999999999998762 223
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccC-CCcEEEEEeCCC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDT 161 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~~~~~ 161 (236)
...++++|.++++|+++++++.+.|.+.++ ..+++ .||+||+....... ..........+|+|+ +++.++++| ++
T Consensus 296 ~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g-~~~~~-~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~~~~~v~i~d-~~ 371 (536)
T PRK10946 296 RAQLASLKLLQVGGARLSETLARRIPAELG-CQLQQ-VFGMAEGLVNYTRL-DDSDERIFTTQGRPMSPDDEVWVAD-AD 371 (536)
T ss_pred cccccceeEEEECCCCCCHHHHHHHHHhcC-CeEEE-eecccccceeeecC-CCccccccccCCcccCCCceEEEEC-CC
Confidence 446789999999999999999999999886 88988 99999965443321 111123456789998 789999999 57
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++++|+.|||+++|+.++.+|+++++.+...+..++||+|||+++++++|++++.||.+|+++++|++|+|.|
T Consensus 372 ~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~e 446 (536)
T PRK10946 372 GNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEE 446 (536)
T ss_pred CCCCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHH
Confidence 899999999999999999999999999999888878899999999999999999999999999999999999864
No 52
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-35 Score=252.60 Aligned_cols=221 Identities=31% Similarity=0.499 Sum_probs=195.4
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCC
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 88 (236)
.++|+++..+|++|.+|+ ..++.++..|+++++.+ .+++..+++.++++++|.++++|+++..+.+........ .+
T Consensus 214 ~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~ 291 (542)
T PRK07786 214 INSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LA 291 (542)
T ss_pred CCCceEEEecchHHHHHH-HHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cc
Confidence 567999999999999999 77889999999999865 578999999999999999999999999998876543333 36
Q ss_pred ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCC
Q 026609 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 168 (236)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g 168 (236)
+|.++++|+++++++++.+.+.+++..+++ .||+||++.+...............+|+|++++.++++| +++++++.|
T Consensus 292 lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~-~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g 369 (542)
T PRK07786 292 LRVLSWGAAPASDTLLRQMAATFPEAQILA-AFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVG 369 (542)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCCCeEEe-eecccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCC
Confidence 999999999999999999999998788888 999999987765443332334567899999999999999 578999999
Q ss_pred CceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 169 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 169 ~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+.|||+++|+.++.+|+++++.+...| .++||+|||+++++++|.+++.||.||+|+++|++|+|.|
T Consensus 370 ~~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~e 436 (542)
T PRK07786 370 EVGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAE 436 (542)
T ss_pred CceEEEEEChhhhhhhcCCHHHHHHHh-hCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHH
Confidence 999999999999999999999888877 6799999999999999999999999999999999999864
No 53
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=5.3e-35 Score=243.77 Aligned_cols=225 Identities=25% Similarity=0.331 Sum_probs=195.2
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCC---HHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD---LEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 82 (236)
+.+...++|++++..|++|.+++ ..++.++..|+++++.+... +..+.+.++++++|.+.++|+.++.|++...
T Consensus 154 ~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~-- 230 (408)
T TIGR01733 154 RRYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP-- 230 (408)
T ss_pred HhcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh--
Confidence 35667788999999999999998 68899999999999987543 6889999999999999999999999988754
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCC-CCCC--CCCCccccCCCcEEEEEeC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSF-AGSR--NIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~-~~~~--~~~~~g~p~~~~~~~~~~~ 159 (236)
..++++|.++.+|+++++++.+.|.+.++...+++ .||+||++.++...... .... ....+|.|.++++++++++
T Consensus 231 -~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~-~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~ 308 (408)
T TIGR01733 231 -PALASLRLVILGGEALTPALVDRWRARGPGARLIN-LYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDD 308 (408)
T ss_pred -hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEe-cccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECC
Confidence 56789999999999999999999999998678888 99999999877532221 1111 2667999999999999996
Q ss_pred CCCCCCCCCCceEEEEecCccchhhcCCcccccccccCC------C--eEecCceEEEcCCCcEEEEcccCCceeeccEE
Q 026609 160 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK------G--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 231 (236)
Q Consensus 160 ~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~------~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 231 (236)
+ ++++++|+.|||+++++.++.+|+++++.+...+... + ||+|||+++++++|++++.||.+|+++++|++
T Consensus 309 ~-~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~ 387 (408)
T TIGR01733 309 D-LRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYR 387 (408)
T ss_pred C-CCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEE
Confidence 4 8999999999999999999999999988887766332 2 99999999999999999999999999999999
Q ss_pred eecCC
Q 026609 232 VTSNW 236 (236)
Q Consensus 232 i~p~~ 236 (236)
++|+|
T Consensus 388 v~~~~ 392 (408)
T TIGR01733 388 IELGE 392 (408)
T ss_pred echHH
Confidence 99975
No 54
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-35 Score=249.45 Aligned_cols=232 Identities=26% Similarity=0.409 Sum_probs=203.5
Q ss_pred eeeeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 3 TMDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 3 ~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
.....++++++|+++++..+.|+.|.+..++++|.+|+|+++.+ ++++..+++++.++++|.+...|+.++.|.+...
T Consensus 271 ~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~ 350 (626)
T KOG1175|consen 271 TSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQ 350 (626)
T ss_pred hcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcc
Confidence 44567899999999999999999999999999999999999986 4689999999999999999999999998877654
Q ss_pred c--CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe
Q 026609 81 V--KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 81 ~--~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 158 (236)
. ...++++||.+.++||++.++.++++.+.++.-.|.+ .||+||+|..++.+.......+++.++.|+++.++.++|
T Consensus 351 ~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e-~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d 429 (626)
T KOG1175|consen 351 EDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYE-TYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD 429 (626)
T ss_pred ccccccccceEEEEeecCccCCcchHHHHHHhcCccchhh-ceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEEC
Confidence 3 3344467999999999999999999999998446888 999999999988754432257889999999999999999
Q ss_pred CCCCCCCCCC-CceEEEEec--C-ccchhhcCCcccccccccC--CCeEecCceEEEcCCCcEEEEcccCCceeeccEEe
Q 026609 159 VDTQKPLPPN-QLGEIWLRG--P-NMMRGYYNNEQATKLTIDK--KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 232 (236)
Q Consensus 159 ~~~~~~~~~g-~~Gel~v~~--~-~~~~~~~~~~~~~~~~~~~--~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 232 (236)
+.|++++.+ ..|+|+++. | .+++++|+|++.....+.. .|+|.|||.+++|+||++++.||.||+||++|.++
T Consensus 430 -e~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRi 508 (626)
T KOG1175|consen 430 -ENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRI 508 (626)
T ss_pred -CCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceee
Confidence 488888876 889999987 3 7789999999966655544 78999999999999999999999999999999999
Q ss_pred ecCC
Q 026609 233 TSNW 236 (236)
Q Consensus 233 ~p~~ 236 (236)
+++|
T Consensus 509 gtaE 512 (626)
T KOG1175|consen 509 GTAE 512 (626)
T ss_pred cHHH
Confidence 9876
No 55
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.5e-35 Score=251.84 Aligned_cols=226 Identities=28% Similarity=0.466 Sum_probs=194.1
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC-
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK- 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~- 82 (236)
..+++.++|++++.+|++|.+|+...++.++..|+++++.+ .+++..+++.++++++|.++++|+++..|.+.....
T Consensus 210 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 289 (534)
T PRK05852 210 TGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP 289 (534)
T ss_pred HHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc
Confidence 45677889999999999999999888999999999998865 478999999999999999999999999998865432
Q ss_pred -CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC------CCCCCCCccccCCCcEEE
Q 026609 83 -KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA------GSRNIGSAGALAPGVEAL 155 (236)
Q Consensus 83 -~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~------~~~~~~~~g~p~~~~~~~ 155 (236)
...++++|.++++|+++++++++++.+.++ ..+++ .||+||++..++...... .....+..|. .++++++
T Consensus 290 ~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~-~~v~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~ 366 (534)
T PRK05852 290 SGRKPAALRFIRSCSAPLTAETAQALQTEFA-APVVC-AFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIR 366 (534)
T ss_pred ccccCCCeeEEEECCCCCCHHHHHHHHHHhC-CChhh-ccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEE
Confidence 335679999999999999999999999997 78888 999999987665432210 1112233344 6899999
Q ss_pred EEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecC
Q 026609 156 IVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 156 ~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
++| ++++++++|+.|||+++++.++.+|+++++.+...+ .+|||+|||++++|+||++++.||++|+||++|.+|+|.
T Consensus 367 i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~-~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~ 444 (534)
T PRK05852 367 IVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF-TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPE 444 (534)
T ss_pred EEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchhhh-cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHH
Confidence 999 468999999999999999999999999999988877 678999999999999999999999999999999999986
Q ss_pred C
Q 026609 236 W 236 (236)
Q Consensus 236 ~ 236 (236)
|
T Consensus 445 ~ 445 (534)
T PRK05852 445 R 445 (534)
T ss_pred H
Confidence 5
No 56
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.3e-35 Score=295.10 Aligned_cols=228 Identities=20% Similarity=0.300 Sum_probs=200.3
Q ss_pred eeeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC--CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 4 ~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
+...++..++|++++++|+.|..+. ..++.++..|+++++.+. +++..+++.++++++|++.++|++++.+++..
T Consensus 3269 ~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~-- 3345 (3956)
T PRK12467 3269 IAEAYELDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA-- 3345 (3956)
T ss_pred HHHhcCCCcCCEEEEecCccHhHHH-HHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc--
Confidence 3456788899999999999999887 788999999999999885 78999999999999999999999999998753
Q ss_pred CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC---CCCCCCCccccCCCcEEEEEe
Q 026609 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~~ 158 (236)
....++++|.+++|||++++++.+.|.+.+++..+++ .||+||++..++...... .......+|+|+++++++++|
T Consensus 3346 ~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d 3424 (3956)
T PRK12467 3346 GGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTN-GYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD 3424 (3956)
T ss_pred cccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEe-CcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC
Confidence 3446789999999999999999999999887778888 999999987665432211 112335789999999999998
Q ss_pred CCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCC-------CeEecCceEEEcCCCcEEEEcccCCceeeccEE
Q 026609 159 VDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK-------GWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 231 (236)
Q Consensus 159 ~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 231 (236)
+.++++|.|+.|||+|+|+.++.||+++++.+...|..+ +||+|||++++++||.++++||+||+||++|++
T Consensus 3425 -~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~r 3503 (3956)
T PRK12467 3425 -GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFR 3503 (3956)
T ss_pred -CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEe
Confidence 679999999999999999999999999999999888544 369999999999999999999999999999999
Q ss_pred eecCC
Q 026609 232 VTSNW 236 (236)
Q Consensus 232 i~p~~ 236 (236)
|+|.|
T Consensus 3504 Ie~~E 3508 (3956)
T PRK12467 3504 IELGE 3508 (3956)
T ss_pred ecHHH
Confidence 99975
No 57
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-35 Score=250.12 Aligned_cols=226 Identities=38% Similarity=0.575 Sum_probs=200.3
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++..++|++++.+|++|..++... +.++..|+++++.+.+++..+++.++++++|.++++|++++.|.+..+.....
T Consensus 201 ~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~ 279 (521)
T PRK06187 201 AWLKLSRDDVYLVIVPMFHVHAWGLP-YLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVD 279 (521)
T ss_pred HhhCCCCCCEEEEeCCchHHhhHHHH-HHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccC
Confidence 35678889999999999999999544 45999999999998889999999999999999999999999999988766778
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC----CCCCCCccccCCCcEEEEEeCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG----SRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~----~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
++++|.++.+|+++++++.++|.+.++ ..+++ .||+||++.++........ ......+|.|++++.++++|+ +
T Consensus 280 ~~~l~~v~~~Ge~l~~~~~~~~~~~~~-~~v~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~ 356 (521)
T PRK06187 280 FSSLRLVIYGGAALPPALLREFKEKFG-IDLVQ-GYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDD-D 356 (521)
T ss_pred cchhhEEEEcCcCCCHHHHHHHHHHhC-cchhe-eeccCccCcccccCCcccccccccccCCccccccCCeEEEEECC-C
Confidence 899999999999999999999999984 88998 9999999877665433221 125678999999999999994 6
Q ss_pred CCCCCC--CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 162 QKPLPP--NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 162 ~~~~~~--g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++. |+.|||+++++.+..+|+.+++.+...+ .++||+|||+++++++|.+++.||.||++|++|.+++|.+
T Consensus 357 ~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~-~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~ 432 (521)
T PRK06187 357 GDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI-DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRE 432 (521)
T ss_pred CCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh-hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHH
Confidence 788888 9999999999999999999988888777 5679999999999999999999999999999999999863
No 58
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=4e-35 Score=276.31 Aligned_cols=228 Identities=18% Similarity=0.167 Sum_probs=194.5
Q ss_pred eeeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 4 ~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
+...+++.++|+++..+|++|..++ ..++.+++.|+++++.+. .++..+++.++++++|.++++|++++.|....
T Consensus 447 ~~~~~~~~~~d~~~~~~~~~~d~~~-~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~- 524 (1389)
T TIGR03443 447 MAKRFGLSENDKFTMLSGIAHDPIQ-RDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA- 524 (1389)
T ss_pred HHHhcCCCCCCEEEEecCceecchH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc-
Confidence 3455778889999999999999888 788999999999999874 36889999999999999999999999887543
Q ss_pred cCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC---------CCCCCCccccCCC
Q 026609 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG---------SRNIGSAGALAPG 151 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~ 151 (236)
...++++|.++++|++++++..+.+.+..++..+++ .||+||++..+........ ......+|+|+++
T Consensus 525 --~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 601 (1389)
T TIGR03443 525 --TTPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVN-MYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKN 601 (1389)
T ss_pred --cccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEE-CccCCccceeEEEEEccccccccchhhcccCcCcCCCccCC
Confidence 235789999999999999999999998887788888 9999999876654221110 1123468999999
Q ss_pred cEEEEEeCCC-CCCCCCCCceEEEEecCccchhhcCCccccccccc----------------------------CCCeEe
Q 026609 152 VEALIVSVDT-QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID----------------------------KKGWVH 202 (236)
Q Consensus 152 ~~~~~~~~~~-~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~ 202 (236)
+++.++|+++ +++++.|+.|||+|+|+.++.||+++++.+...|. .++||+
T Consensus 602 ~~~~ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 681 (1389)
T TIGR03443 602 VQLLVVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYR 681 (1389)
T ss_pred CEEEEECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceee
Confidence 9999999543 57899999999999999999999999998877762 257999
Q ss_pred cCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 203 TGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 203 TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|||++++++||.++|.||.||+||++|+||+|.|
T Consensus 682 TGDlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~e 715 (1389)
T TIGR03443 682 TGDLGRYLPDGNVECCGRADDQVKIRGFRIELGE 715 (1389)
T ss_pred cCCceeEcCCCCEEEecccCCEEEeCcEEecHHH
Confidence 9999999999999999999999999999999975
No 59
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-35 Score=260.24 Aligned_cols=228 Identities=26% Similarity=0.397 Sum_probs=185.2
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC--C--CHHHHHHHHHhcCc---eEEEeChHHHHHHHhc
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F--DLEMFLRAIEKHRV---THIWVVPPLILALAKH 78 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~ 78 (236)
..++..++|++++.+|++|.+|+. .++.+++.|+++++.++ + ++..+++.++++++ +.+.++|+++..+...
T Consensus 214 ~~~~~~~~d~~l~~~Pl~h~~gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~ 292 (631)
T PRK07769 214 DALEGQEGDRGVSWLPFFHDMGLI-TVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAA 292 (631)
T ss_pred HHcCCCCcceEEEeCCCcCchhhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHh
Confidence 345677889999999999999995 45566777888887753 4 88899999999886 7888999987776543
Q ss_pred ---CC--cCCCCCCCceEEeecCCCCCHHHHHHHHHhCC-----CCceeeccccccccccccccccCCCCC---------
Q 026609 79 ---GL--VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQVGYGLTETSGIATMENSFAGS--------- 139 (236)
Q Consensus 79 ---~~--~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~v~~~~YG~tE~g~~~~~~~~~~~~--------- 139 (236)
.. ....+++++|.+++||+++++++.++|.+.|+ ...+.+ .||+||++..++........
T Consensus 293 ~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~ 371 (631)
T PRK07769 293 RGLPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKP-SYGMAEATLFVSTTPMDEEPTVIYVDRDE 371 (631)
T ss_pred hccchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhccc-ccchhhheeEEeccCCCCCceEEEEcHHH
Confidence 11 12447889999999999999999999999873 234777 99999997655543211100
Q ss_pred ----------------CCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCccccccccc-------
Q 026609 140 ----------------RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID------- 196 (236)
Q Consensus 140 ----------------~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~------- 196 (236)
.....+|+|.++..++++|++++++++.|+.|||+++|+.++.||+++++.+...|.
T Consensus 372 ~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~ 451 (631)
T PRK07769 372 LNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRL 451 (631)
T ss_pred HhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhccccc
Confidence 012368999999999999977899999999999999999999999999988877763
Q ss_pred ----------CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 197 ----------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 197 ----------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.+|||+|||++++ ++|+++|+||.||+||++|+||+|.|
T Consensus 452 ~~~~~~~~~~~~gw~~TGDlg~~-~dG~l~i~GR~~d~Ik~~G~~V~p~e 500 (631)
T PRK07769 452 SESHAEGAPDDALWVRTGDYGVY-FDGELYITGRVKDLVIIDGRNHYPQD 500 (631)
T ss_pred ccccccCcccCCCeeeccccccE-ECCEEEEEcccccEEEECCeeeCHHH
Confidence 2489999999999 59999999999999999999999976
No 60
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-34 Score=248.37 Aligned_cols=221 Identities=23% Similarity=0.322 Sum_probs=191.1
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--CCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~ 84 (236)
..+..++|+++..+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+.+.... ...
T Consensus 211 ~~~~~~~d~~~~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 289 (516)
T PRK13383 211 RTRLRTGSRISVAMPMFHGLGL-GMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARN 289 (516)
T ss_pred hhccCCCCeEEEecCCcchhhH-HHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccC
Confidence 3567788999999999999999 5677889999999998889999999999999999999999999999875432 233
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
.++++|.++++|+++++++.++|.+.++ ..+++ .||+||++..+..... ........+|+|+++++++++| +++++
T Consensus 290 ~~~~lr~i~~gG~~l~~~~~~~~~~~~g-~~v~~-~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d-~~~~~ 365 (516)
T PRK13383 290 PLPQLRVVMSSGDRLDPTLGQRFMDTYG-DILYN-GYGSTEVGIGALATPA-DLRDAPETVGKPVAGCPVRILD-RNNRP 365 (516)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHcC-chhhh-cccccccccceecccc-ccccCCCcccCCCCCcEEEEEC-CCCCC
Confidence 5789999999999999999999999997 77888 9999999866554322 1234467899999999999999 57899
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.|+.|||+++++..+.+|++++... + .+|||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 366 ~~~g~~Gel~v~g~~~~~~Y~~~~~~~---~-~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~e 433 (516)
T PRK13383 366 VGPRVTGRIFVGGELAGTRYTDGGGKA---V-VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRA 433 (516)
T ss_pred CCCCCceEEEEecCcccccccCCchhh---e-ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHH
Confidence 999999999999999999998775422 2 5799999999999999999999999999999999999864
No 61
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=7.7e-35 Score=258.58 Aligned_cols=220 Identities=25% Similarity=0.436 Sum_probs=185.3
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..++..++|++++.+|++|.+|+...++.++..|+++++.+. ++...+++.++++++|.++++|+++..+.+.. ...
T Consensus 399 ~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~ 476 (718)
T PRK08043 399 TIADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPY 476 (718)
T ss_pred HhhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--Ccc
Confidence 345678899999999999999997778999999999999874 56788899999999999999999998876642 334
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
+++++|.++++|+++++++.+.|.+.++ ..+++ .||+||++.++...... ....+++|+|+|+++++++|+ ++.
T Consensus 477 ~~~~lr~i~~gg~~l~~~~~~~~~~~~g-~~l~~-~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~-~~~- 550 (718)
T PRK08043 477 DFARLRYVVAGAEKLQESTKQLWQDKFG-LRILE-GYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSV-PGI- 550 (718)
T ss_pred cccceEEEEEeCccCCHHHHHHHHHHcC-CCeec-ccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecC-CCC-
Confidence 6789999999999999999999999986 88888 99999998766543222 345678999999999999984 332
Q ss_pred CCCCCceEEEEecCccchhhcCC--ccc-------ccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNN--EQA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
++.|||+++|+.++.+|+++ ++. +...+..+|||+|||++++|+||++++.||+||+||++|++|+|.
T Consensus 551 ---~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~ 627 (718)
T PRK08043 551 ---EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLE 627 (718)
T ss_pred ---CCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHH
Confidence 45699999999999999983 332 222233578999999999999999999999999999999999997
Q ss_pred C
Q 026609 236 W 236 (236)
Q Consensus 236 ~ 236 (236)
|
T Consensus 628 e 628 (718)
T PRK08043 628 M 628 (718)
T ss_pred H
Confidence 5
No 62
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.6e-35 Score=296.77 Aligned_cols=228 Identities=21% Similarity=0.274 Sum_probs=199.9
Q ss_pred eeeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC---CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 4 ~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
+...++..++|++++.+|++|..++ ..++.++..|+++++.+ .+++..+++.++++++|++.++|++++.|++...
T Consensus 687 ~~~~~~~~~~d~~l~~~p~~fd~~~-~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~ 765 (5163)
T PRK12316 687 MQQAYGLGVGDTVLQKTPFSFDVSV-WEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED 765 (5163)
T ss_pred HHHhcCCCCCCEEEeeCCeehHHHH-HHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc
Confidence 3456778899999999999999998 68899999999999985 3789999999999999999999999999987542
Q ss_pred cCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCC
Q 026609 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD 160 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~ 160 (236)
...++++|.+++|||++++++.+.|.+.+++..+++ .||+||++..+..............+|+|+++++++++| +
T Consensus 766 --~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~ 841 (5163)
T PRK12316 766 --VASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYN-LYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILD-A 841 (5163)
T ss_pred --cccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEe-CcCcChheeeeeEEecccccCCCCCCccccCCCEEEEEC-C
Confidence 336789999999999999999999998887788888 999999986554433322234456799999999999999 5
Q ss_pred CCCCCCCCCceEEEEecCccchhhcCCccccccccc------CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeec
Q 026609 161 TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 234 (236)
Q Consensus 161 ~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p 234 (236)
+++++|.|+.|||+|+|+.++.||+++++.+...|. .++||+|||++++++||.+++.||+||+||++|++|+|
T Consensus 842 ~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~ 921 (5163)
T PRK12316 842 NLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIEL 921 (5163)
T ss_pred CCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcCh
Confidence 789999999999999999999999999999888773 24599999999999999999999999999999999999
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 922 ~E 923 (5163)
T PRK12316 922 GE 923 (5163)
T ss_pred HH
Confidence 76
No 63
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-34 Score=248.17 Aligned_cols=224 Identities=24% Similarity=0.353 Sum_probs=191.6
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--CCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~ 84 (236)
.+....+|+++..+|++|.+++.. .+..+..|+++++.+.+++..+++.++++++|.+.++|+++..|++.... ...
T Consensus 189 ~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 267 (501)
T PRK13390 189 FYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRY 267 (501)
T ss_pred HhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccC
Confidence 456788899999999999999843 34456789999998889999999999999999999999999998875432 334
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
.++++|.++.+|+++++++.+.+.+.++ ..+++ .||+||++.++...... .....+.+|+|.++ .++++| +++++
T Consensus 268 ~~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g-~~~i~d-~~~~~ 342 (501)
T PRK13390 268 DVSSLRAVIHAAAPCPVDVKHAMIDWLG-PIVYE-YYSSTEAHGMTFIDSPD-WLAHPGSVGRSVLG-DLHICD-DDGNE 342 (501)
T ss_pred ChhhhheEEEcCCCCCHHHHHHHHHhcC-Cceee-eecccccCceEEecchh-hccCCCCcCCcccc-eEEEEC-CCCCC
Confidence 5779999999999999999999999886 77888 99999998755432211 12345688999999 789998 67899
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccC--CCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK--KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++|+.|||+++++.++.+|+++++.+...+.. ++|++|||+++++++|.+++.||.||+||++|++|+|+|
T Consensus 343 ~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~e 416 (501)
T PRK13390 343 LPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQE 416 (501)
T ss_pred CCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHH
Confidence 999999999999999999999999988877643 579999999999999999999999999999999999975
No 64
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.4e-34 Score=247.96 Aligned_cols=225 Identities=22% Similarity=0.323 Sum_probs=197.8
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..++.+++|+++..+|++|..++...++.++..|+++++.+ .+++..+++.++++++|.+.++|+++..++........
T Consensus 196 ~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~ 275 (508)
T TIGR02262 196 NTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAE 275 (508)
T ss_pred HhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCcccccc
Confidence 34578889999999999999999777888999999999876 46899999999999999999999999888776544444
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
...++|.++++|+++++++.+.|.+.++ ..+++ .||+||++.++...... ....+.+|+|++++.++++| +++++
T Consensus 276 ~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~v~~-~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d-~~~~~ 350 (508)
T TIGR02262 276 DQVRLRLCTSAGEALPAEVGQRWQARFG-VDIVD-GIGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVG-DGGQD 350 (508)
T ss_pred ccccceeEEEcCCCCCHHHHHHHHHHhC-Cchhh-CccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEEC-CCCCC
Confidence 5678999999999999999999999987 78888 99999998765543222 33456789999999999999 78999
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++|+.|||+++++..+.+|+++++.+...+ .++||+|||+++++++|.++++||.+|+|+++|.+|+|.|
T Consensus 351 ~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ 421 (508)
T TIGR02262 351 VAAGEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFE 421 (508)
T ss_pred CCCCCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHH
Confidence 9999999999999999999999998888777 6789999999999999999999999999999999999864
No 65
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-35 Score=250.78 Aligned_cols=227 Identities=28% Similarity=0.439 Sum_probs=192.6
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
+..++..++|++++.+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|.++++|+++..|.+.. ....
T Consensus 214 ~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~ 291 (540)
T PRK06164 214 ARAYGYDPGAVLLAALPFCGVFGF-STLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERA 291 (540)
T ss_pred HHhcCCCCCCEEEEcCCchhHHHH-HHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccC
Confidence 344667889999999999999999 67899999999999999999999999999999999999999999998873 3455
Q ss_pred CCCCceEEeecC-CCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC-CCCCCCCccccC-CCcEEEEEeCCC
Q 026609 85 DLSSLKLVGSGA-APLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA-GSRNIGSAGALA-PGVEALIVSVDT 161 (236)
Q Consensus 85 ~l~~lr~i~~~G-~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~-~~~~~~~~g~p~-~~~~~~~~~~~~ 161 (236)
.++++|.+..+| .+...++.+++.+. +..+++ .||+||++.++....... ........|.|. +++.++++|+++
T Consensus 292 ~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~ 368 (540)
T PRK06164 292 DFPSARLFGFASFAPALGELAALARAR--GVPLTG-LYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQD 368 (540)
T ss_pred CCcceeeeeeccCCcchHHHHHHHhhc--CCceec-ceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCC
Confidence 788999887766 45556676666655 478888 999999987665433221 112223456665 789999999888
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++.|+.|||+++|+.++.+|+++++.+...+..++||+|||+++++++|.+++.||.||+||++|++|+|.|
T Consensus 369 ~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~e 443 (540)
T PRK06164 369 GALLPDGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAE 443 (540)
T ss_pred CcCCCCCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHH
Confidence 999999999999999999999999999999988888899999999999999999999999999999999999975
No 66
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=3.2e-35 Score=252.79 Aligned_cols=223 Identities=27% Similarity=0.372 Sum_probs=177.9
Q ss_pred eeccCC-CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC--C--CHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 6 QETAGE-LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F--DLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 6 ~~~~~~-~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
+.++.. ++|++++.+|++|.+|+ ..++.+++.|+++++.+. + ++..+++.++++++|.+...|.++..+.+...
T Consensus 186 ~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~ 264 (525)
T PRK05851 186 ARVGLDAATDVGCSWLPLYHDMGL-AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYAR 264 (525)
T ss_pred HHhCCCCCCCeEEEcCCCccCccH-HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhc
Confidence 345666 88999999999999999 577899999999999763 4 57789999999999987554444444433221
Q ss_pred -cCCCCCCCceEEeecCCCCCHHHHHHHHHh---CC--CCceeeccccccccccccccccCCC-------------CCCC
Q 026609 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKN---VP--SATVIQVGYGLTETSGIATMENSFA-------------GSRN 141 (236)
Q Consensus 81 -~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~---~~--~~~v~~~~YG~tE~g~~~~~~~~~~-------------~~~~ 141 (236)
.....++++|.++++|+++++++.++|.+. ++ ...+.+ .||+||++..+....... ....
T Consensus 265 ~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (525)
T PRK05851 265 RVSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAP-SYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARR 343 (525)
T ss_pred cccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhccc-ccchhhhceEEEecCCCCCceeeeeccccCcccce
Confidence 234457899999999999999999998875 33 234777 999999976554321110 0123
Q ss_pred CCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEccc
Q 026609 142 IGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI 221 (236)
Q Consensus 142 ~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~ 221 (236)
...+|+|+++++++++|++++++++.|+.|||+++|+.++.||+++++.. .++||+|||+++++ +|.++++||+
T Consensus 344 ~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~ 417 (525)
T PRK05851 344 HAVLGNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRA 417 (525)
T ss_pred eeeecCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeec
Confidence 45789999999999999766677999999999999999999999987532 47899999999986 7999999999
Q ss_pred CCceeeccEEeecCC
Q 026609 222 KELIKYKGFQVTSNW 236 (236)
Q Consensus 222 ~d~i~~~G~~i~p~~ 236 (236)
||+||++|+||+|.|
T Consensus 418 dd~i~~~G~~v~p~e 432 (525)
T PRK05851 418 KELITVAGRNIFPTE 432 (525)
T ss_pred CCEEEECCEEeCHHH
Confidence 999999999999975
No 67
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.1e-34 Score=272.02 Aligned_cols=229 Identities=19% Similarity=0.206 Sum_probs=197.5
Q ss_pred eeeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC---CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 4 ~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
+...+++.++|++++.+|++|..++ ..++.++..|+++++.+ ..++..+++.++++++|.+.++|+++..+++...
T Consensus 630 ~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~ 708 (1296)
T PRK10252 630 MQNHYPLTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLT 708 (1296)
T ss_pred HHHhcCCCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhc
Confidence 3456788899999999999999998 68899999999999976 3579999999999999999999999999887643
Q ss_pred cCC--CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC-----CCCCCCccccCCCcE
Q 026609 81 VKK--FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG-----SRNIGSAGALAPGVE 153 (236)
Q Consensus 81 ~~~--~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~-----~~~~~~~g~p~~~~~ 153 (236)
... ..++++|.+++|||++++++.+.|.+.++ ..+++ .||+||++..++....... ......+|+|++++.
T Consensus 709 ~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~-~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~ 786 (1296)
T PRK10252 709 PEGARQSCASLRQVFCSGEALPADLCREWQQLTG-APLHN-LYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTG 786 (1296)
T ss_pred cccccccCCCccEEEEecCCCCHHHHHHHHhcCC-CEEEe-CCCcchhhheeeeeecccccccccCCCCCCcccccCCCE
Confidence 222 34678999999999999999999998875 78888 9999999876654332211 223457899999999
Q ss_pred EEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccC------CCeEecCceEEEcCCCcEEEEcccCCceee
Q 026609 154 ALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK------KGWVHTGDLGYFDGDGQLYVVDRIKELIKY 227 (236)
Q Consensus 154 ~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~ 227 (236)
+.++| +.+++++.|..|||+|+|+.++.||+++++.+...|.. ++||+|||+++++++|.++++||.||+||+
T Consensus 787 ~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~ 865 (1296)
T PRK10252 787 LRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKI 865 (1296)
T ss_pred EEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEE
Confidence 99999 68999999999999999999999999999988877743 349999999999999999999999999999
Q ss_pred ccEEeecCC
Q 026609 228 KGFQVTSNW 236 (236)
Q Consensus 228 ~G~~i~p~~ 236 (236)
+|++|+|.|
T Consensus 866 ~G~ri~~~e 874 (1296)
T PRK10252 866 RGQRIELGE 874 (1296)
T ss_pred eeEEecHHH
Confidence 999999875
No 68
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=2.3e-34 Score=248.32 Aligned_cols=221 Identities=27% Similarity=0.414 Sum_probs=194.8
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..+++++++++++.+|++|..++ ..++.+++.|+++++.+.+++..+++.++++++|.+.++|+++..|.+........
T Consensus 214 ~~~~~~~~~~~l~~~pl~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 292 (542)
T PRK06155 214 EDLEIGADDVLYTTLPLFHTNAL-NAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDR 292 (542)
T ss_pred HhcCCCCCCEEEEecCHHHHHHH-HHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccc
Confidence 44667889999999999999999 56789999999999999999999999999999999999999999998876655566
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
.+++|.++.+| +++++.+.+.+.++ ..+++ .||+||++.++..... ....+.+|.|.++++++++| ++++++
T Consensus 293 ~~~l~~~~~g~--~~~~~~~~~~~~~~-~~v~~-~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d-~~~~~~ 364 (542)
T PRK06155 293 AHRVRVALGPG--VPAALHAAFRERFG-VDLLD-GYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVD-EHDQEL 364 (542)
T ss_pred cCceEEEEEcC--CCHHHHHHHHHHcC-CCEEe-eecccccCccccCCCC---CCCCCCcCccCCCceEEEEC-CCCCCC
Confidence 77899887665 57889999999987 78888 9999999887664321 34567899999999999999 568999
Q ss_pred CCCCceEEEEecC---ccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGP---NMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+.|+.|||+++++ .++.||+++++.+...+ .++||+|||+++++++|++++.||.+|+|+++|.+|+|+|
T Consensus 365 ~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~e 437 (542)
T PRK06155 365 PDGEPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFE 437 (542)
T ss_pred CCCCceEEEEecCCccccchhhcCCHHHHHHhh-cCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHH
Confidence 9999999999998 68999999998887776 6899999999999999999999999999999999999975
No 69
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-34 Score=249.75 Aligned_cols=223 Identities=26% Similarity=0.384 Sum_probs=186.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
++...+++.++.+|++|..++ ...+.+++.|+++++ ++.++..+++.++++++|.++++|+++..|.+.......+++
T Consensus 209 ~~~~~~~~~~~~~p~~h~~~l-~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~ 286 (540)
T PRK05857 209 VTWVVGETTYSPLPATHIGGL-WWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVP 286 (540)
T ss_pred cccccCceeeecCCccccchH-HHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCc
Confidence 345567899999999999999 467788999998876 446788999999999999999999999999887765666889
Q ss_pred CceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC---CCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG---SRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
++|.++++|++++....+ +.+.++ .++.+ .||+||++........... ..+.+.+|+|+++++++++|+++..+
T Consensus 287 ~lr~~~~gG~~~~~~~~~-~~~~~g-~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~ 363 (540)
T PRK05857 287 SLRLVGYGGSRAIAADVR-FIEATG-VRTAQ-VYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGP 363 (540)
T ss_pred cceEEEEcCccCCchhHH-HHHHhC-Ceeec-ccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCc
Confidence 999999999999888775 555665 88888 9999999865443222111 12456899999999999999654433
Q ss_pred C-----CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 L-----PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~-----~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+ +.|+.|||+++++.++.||+++++.+...+ .+|||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 364 ~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~e 439 (540)
T PRK05857 364 TAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDE 439 (540)
T ss_pred cccccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCceeccceEEEcCCceEEEeccccccEecCCEEECHHH
Confidence 3 457899999999999999999999888877 6889999999999999999999999999999999999975
No 70
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.6e-34 Score=245.43 Aligned_cols=225 Identities=28% Similarity=0.424 Sum_probs=193.7
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC--cCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VKK 83 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~ 83 (236)
..++..++|+++..+|++|..+.. ..+.++..|+++++.+.+++..+++.++++++|.+.++|+++..|++..+ ...
T Consensus 189 ~~~~~~~~~~~l~~~p~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 267 (509)
T PRK12406 189 LIYGLKPGIRALLTGPLYHSAPNA-YGLRAGRLGGVLVLQPRFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAK 267 (509)
T ss_pred hhcCCCCCceEEEEeCCcccchHH-HHHHHHhhheEEEEccCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhccc
Confidence 456678899999999999998874 44567888999999888899999999999999999999999999987543 233
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
.+++++|.++.+|+++++++.+++.+.++ ..+++ .||+||++.++.... .+....++.+|.|.++++++++| ++++
T Consensus 268 ~~~~~l~~v~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~ 343 (509)
T PRK12406 268 YDVSSLRHVIHAAAPCPADVKRAMIEWWG-PVIYE-YYGSTESGAVTFATS-EDALSHPGTVGKAAPGAELRFVD-EDGR 343 (509)
T ss_pred CCCCceeEEEEcCCCCCHHHHHHHHHHcC-CcEEe-eccccccCceEecCc-ccccccCCCcCccCCCcEEEEEC-CCCC
Confidence 46789999999999999999999999887 77888 999999998765432 22234457899999999999999 5789
Q ss_pred CCCCCCceEEEEecCccch-hhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMR-GYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+++++.++. +|+++++.+...+ .++||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 344 ~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~ 416 (509)
T PRK12406 344 PLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAE 416 (509)
T ss_pred CCCCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHH
Confidence 9999999999999998765 8888888776655 7899999999999999999999999999999999999864
No 71
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.1e-34 Score=247.89 Aligned_cols=222 Identities=32% Similarity=0.542 Sum_probs=190.7
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
+..++|+++..+|++|..++ ..++ .++.|++.++.+ .+++..+++.++++++|.+.++|++++.+.+........+
T Consensus 202 ~~~~~d~~l~~~p~~~~~~~-~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 279 (528)
T PRK07470 202 GTTEQDASLVVAPLSHGAGI-HQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDH 279 (528)
T ss_pred CCCcccEEEEeccchhHHHH-HHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCC
Confidence 45678999999999999998 4444 566777776664 5789999999999999999999999999988776666678
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCC------CCCCCCCCccccCCCcEEEEEeCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSF------AGSRNIGSAGALAPGVEALIVSVD 160 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~------~~~~~~~~~g~p~~~~~~~~~~~~ 160 (236)
+++|.++++|++++++..+++.+.++ ..+++ .||+||++..+...... ......+.+|.|.++++++++| +
T Consensus 280 ~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~ 356 (528)
T PRK07470 280 SSLRYVIYAGAPMYRADQKRALAKLG-KVLVQ-YFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-D 356 (528)
T ss_pred cceEEEEEcCCCCCHHHHHHHHHHhC-cHHHH-hCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-C
Confidence 89999999999999999999999887 77888 99999988765432211 0123456789999999999999 5
Q ss_pred CCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 161 TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 161 ~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++++.|+.|||+++++.++.+|+++++.+...+ .++||+|||+++++++|++++.||.||++|++|++|+|.|
T Consensus 357 ~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~ 431 (528)
T PRK07470 357 EGRELPPGETGEICVIGPAVFAGYYNNPEANAKAF-RDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPRE 431 (528)
T ss_pred CCCCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-cCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHH
Confidence 78899999999999999999999999998887776 6899999999999999999999999999999999999864
No 72
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.6e-34 Score=245.55 Aligned_cols=225 Identities=26% Similarity=0.359 Sum_probs=195.2
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.+.+.++|++++.+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+... ....+
T Consensus 196 ~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~ 273 (515)
T TIGR03098 196 YLENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAA 273 (515)
T ss_pred HhCCCcccEEEEECchhhHhHH-HHHHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCc
Confidence 4567788999999999999999 578899999999999988999999999999999999999999999987532 22466
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+.+.+.+++..+++ .||+||++....... ......++.+|+|++++++++++ +++++++
T Consensus 274 ~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~ 350 (515)
T TIGR03098 274 PSLRYLTNSGGAMPRATLSRLRSFLPNARLFL-MYGLTEAFRSTYLPP-EEVDRRPDSIGKAIPNAEVLVLR-EDGSECA 350 (515)
T ss_pred cceEEEEecCCcCCHHHHHHHHHHCCCCeEee-eeccccccceEeccc-ccccCCCCCcceecCCCEEEEEC-CCCCCCC
Confidence 79999999999999999999999997678888 999999976554322 22234567899999999999999 5788999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccC-----------CCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDK-----------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
.|+.|||+++++.++.+|++++..+...+.. ++||+|||+++++++|++++.||.+|+|+++|++|+|+
T Consensus 351 ~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~ 430 (515)
T TIGR03098 351 PGEEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPT 430 (515)
T ss_pred CCCceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHH
Confidence 9999999999999999999988776655422 34899999999999999999999999999999999997
Q ss_pred C
Q 026609 236 W 236 (236)
Q Consensus 236 ~ 236 (236)
|
T Consensus 431 e 431 (515)
T TIGR03098 431 E 431 (515)
T ss_pred H
Confidence 5
No 73
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=4.9e-34 Score=246.31 Aligned_cols=221 Identities=38% Similarity=0.623 Sum_probs=193.9
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceE
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 91 (236)
..+++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|++........++++|.
T Consensus 237 ~~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~ 316 (541)
T TIGR03205 237 DVERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLAT 316 (541)
T ss_pred CCceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccce
Confidence 34799999999999999788889999999999988889999999999999999999999999998765444556789999
Q ss_pred EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe-CCCCCCCCCCCc
Q 026609 92 VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS-VDTQKPLPPNQL 170 (236)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~-~~~~~~~~~g~~ 170 (236)
++++|+++++++.+++.+.++ ..+++ .||+||++.++...... .....+.+|.|++++.+++.+ ++.+++++.|+.
T Consensus 317 i~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~ 393 (541)
T TIGR03205 317 IGSGGAPLPVEVANFFERKTG-LKLKS-GWGMTETCSPGTGHPPE-GPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEV 393 (541)
T ss_pred EEEccccCCHHHHHHHHHHhC-CCeec-ccccccCCcccccCCCC-CCCCCCCcceeccCceeEEEecCCCCccCCCCCe
Confidence 999999999999999998886 88888 99999998776654322 123456789999999998865 356789999999
Q ss_pred eEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 171 GEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 171 Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|||+++++.++.+|+++++.+...+ .++||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 394 Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~e 458 (541)
T TIGR03205 394 GELRIRGPNVTRGYWNRPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQM 458 (541)
T ss_pred eEEEEecCCccccccCChhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHH
Confidence 9999999999999999998888777 5789999999999999999999999999999999999875
No 74
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-34 Score=256.76 Aligned_cols=217 Identities=28% Similarity=0.423 Sum_probs=175.9
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHH-------HHHhcCceEEEeChHHHHHHHhcCCc--
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLR-------AIEKHRVTHIWVVPPLILALAKHGLV-- 81 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~~~-- 81 (236)
.++|++++.+|++|.++.. .....+..|+++++. ++..+.+ .++++++|.+.++|.+++.+.+....
T Consensus 308 ~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~ 383 (700)
T PTZ00216 308 EEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKL 383 (700)
T ss_pred CCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHH
Confidence 6789999999999999984 445567888887774 3444444 68899999999999999887643110
Q ss_pred -----------------------CCC----------------CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeecccc
Q 026609 82 -----------------------KKF----------------DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYG 122 (236)
Q Consensus 82 -----------------------~~~----------------~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG 122 (236)
... ..+++|.+++||+++++++.++++..++ .+++ .||
T Consensus 384 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~~-~YG 460 (700)
T PTZ00216 384 PPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVIQ-GWG 460 (700)
T ss_pred hccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHhh-ccC
Confidence 000 0157999999999999999887777664 7888 999
Q ss_pred ccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCC-CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeE
Q 026609 123 LTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ-KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWV 201 (236)
Q Consensus 123 ~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~-~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (236)
+||++..+...... ....+++|+|+++++++++|.++. ...+++..|||+|+|+.++.||+++++.+...|..+|||
T Consensus 461 ~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~ 538 (700)
T PTZ00216 461 LTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWF 538 (700)
T ss_pred cccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCe
Confidence 99998765543322 345678999999999999995432 334566789999999999999999999999999889999
Q ss_pred ecCceEEEcCCCcEEEEcccCCcee-eccEEeecCC
Q 026609 202 HTGDLGYFDGDGQLYVVDRIKELIK-YKGFQVTSNW 236 (236)
Q Consensus 202 ~TgD~~~~~~~g~~~~~GR~~d~i~-~~G~~i~p~~ 236 (236)
+|||+|++++||+++++||+||+|| .+|++|+|+|
T Consensus 539 ~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~e 574 (700)
T PTZ00216 539 HTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEA 574 (700)
T ss_pred eccceEEEcCCCcEEEEEehHhheecCCCceeccHH
Confidence 9999999999999999999999998 7999999975
No 75
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1.3e-34 Score=255.91 Aligned_cols=223 Identities=28% Similarity=0.373 Sum_probs=177.7
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCC--------HHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD--------LEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
+..++|++++++|++|.+++. ....++..|+++.+..... ...+++.++++++|.+.++|+++..+.+...
T Consensus 288 ~~~~~d~~l~~lPl~Hi~~~~-~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~ 366 (696)
T PLN02387 288 KLGKNDVYLAYLPLAHILELA-AESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVR 366 (696)
T ss_pred CCCCCCEEEEECcHHHHHHHH-HHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHH
Confidence 567889999999999999994 4445677888877654321 2345678999999999999999998865321
Q ss_pred cCC----------------------------------------------CCC-CCceEEeecCCCCCHHHHHHHHHhCCC
Q 026609 81 VKK----------------------------------------------FDL-SSLKLVGSGAAPLGKELMEECAKNVPS 113 (236)
Q Consensus 81 ~~~----------------------------------------------~~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~ 113 (236)
... ..+ +++|.+++||+++++++.+.+...++
T Consensus 367 ~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g- 445 (696)
T PLN02387 367 KKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLG- 445 (696)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcC-
Confidence 000 001 58999999999999999888887786
Q ss_pred CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeC-CCCCCC--CCCCceEEEEecCccchhhcCCccc
Q 026609 114 ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQKPL--PPNQLGEIWLRGPNMMRGYYNNEQA 190 (236)
Q Consensus 114 ~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~-~~~~~~--~~g~~Gel~v~~~~~~~~~~~~~~~ 190 (236)
..+++ .||+||++..++..... ....+.+|.|+|+++++++|. +.+..+ .++..|||+++|+.++.||+++++.
T Consensus 446 ~~v~~-~YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~ 522 (696)
T PLN02387 446 APIGQ-GYGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEK 522 (696)
T ss_pred CCeeE-eechhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHH
Confidence 88999 99999998766544332 345678999999999999984 333333 2445799999999999999999999
Q ss_pred ccccc--cCCC--eEecCceEEEcCCCcEEEEcccCCceee-ccEEeecCC
Q 026609 191 TKLTI--DKKG--WVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 236 (236)
Q Consensus 191 ~~~~~--~~~~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~ 236 (236)
+...| +.+| ||+|||+|++|+||+++++||++|+||+ +|++|+|+|
T Consensus 523 T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~e 573 (696)
T PLN02387 523 TDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGK 573 (696)
T ss_pred HhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHH
Confidence 99887 3345 9999999999999999999999999998 699999975
No 76
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-34 Score=246.97 Aligned_cols=220 Identities=32% Similarity=0.512 Sum_probs=193.9
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceE
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 91 (236)
++++++.+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+.++|+++..+.+.......+++++|.
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~ 331 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV 331 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE
Confidence 4578889999999998777788888888877766 457899999999999999999999999998876655667889999
Q ss_pred EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCce
Q 026609 92 VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLG 171 (236)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~G 171 (236)
++.+|+++++.+.+.|.+.++ ..+++ .||+||++.++...... .......+|.|++++.++++| +++++++.|+.|
T Consensus 332 ~~~gg~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g~~G 407 (557)
T PRK07059 332 ANGGGMAVQRPVAERWLEMTG-CPITE-GYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVSIRD-DDGNDLPLGEPG 407 (557)
T ss_pred EEeccccCCHHHHHHHHHHhC-CCeee-ccccccccchhhcCCCC-CCCcCCcccCccCCcEEEEEC-CCCCCCCCCCce
Confidence 999999999999999999886 88999 99999998876544322 233457899999999999999 578999999999
Q ss_pred EEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 172 EIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 172 el~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
||+++++.++.+|+++++.+...+..+|||+|||+++++++|.+++.||++|+|+++|++|+|.|
T Consensus 408 el~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~ 472 (557)
T PRK07059 408 EICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNE 472 (557)
T ss_pred EEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHH
Confidence 99999999999999999998887877899999999999999999999999999999999999864
No 77
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.1e-34 Score=246.98 Aligned_cols=227 Identities=30% Similarity=0.461 Sum_probs=194.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
....++|++++.+|++|.+|+...++.+++.|+++++.+++++..+++.+++++++.+.++|..+..+++.......+++
T Consensus 246 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~ 325 (567)
T PRK06178 246 VVGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLS 325 (567)
T ss_pred ccCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcc
Confidence 45678899999999999999977888999999999999999999999999999999999999999998877655555677
Q ss_pred CceEEee--cCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC-----CCCCCCCccccCCCcEEEEEeCC
Q 026609 88 SLKLVGS--GAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA-----GSRNIGSAGALAPGVEALIVSVD 160 (236)
Q Consensus 88 ~lr~i~~--~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~-----~~~~~~~~g~p~~~~~~~~~~~~ 160 (236)
++|.+.. .++.+++++.+.|++.++ ..++.+.||+||++..+....... ....+..+|.|+++++++++|++
T Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~ 404 (567)
T PRK06178 326 SLRQVRVVSFVKKLNPDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFE 404 (567)
T ss_pred hheeeeeccccccCCHHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCC
Confidence 8888654 458999999999999987 555543799999876654322110 02234568999999999999977
Q ss_pred CCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 161 TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 161 ~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++++.|+.|||+++|+.++.+|+++++.+...+ .+|||+|||+++++++|++++.||++|+|+++|++|+|.|
T Consensus 405 ~~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~e 479 (567)
T PRK06178 405 TGELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSE 479 (567)
T ss_pred CCCcCCCCCceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHH
Confidence 89999999999999999999999999998887776 6789999999999999999999999999999999999865
No 78
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.8e-35 Score=232.53 Aligned_cols=227 Identities=28% Similarity=0.399 Sum_probs=202.7
Q ss_pred eeccCCCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
+-+++.+++++++.+|..|-+-+.. ..++.++.|+|+|+.+..+++....+|++++||+...+|.+...+++..+....
T Consensus 223 EiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~ 302 (542)
T COG1021 223 EICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERA 302 (542)
T ss_pred hhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccC
Confidence 4478889999999999999877743 378999999999999999999999999999999999999999999999988999
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCC-CcEEEEEeCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAP-GVEALIVSVDTQK 163 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~-~~~~~~~~~~~~~ 163 (236)
++++||.+=.||..+++++.+++...++ +.+-+ .||+.|--. ++..-.+..+.-..+.|+|+. .=+++++| ++|+
T Consensus 303 ~LsSLrllQVGGarl~~~~Arrv~~~lg-C~LQQ-VFGMAEGLv-nyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~ 378 (542)
T COG1021 303 DLSSLRLLQVGGARLSATLARRVPAVLG-CQLQQ-VFGMAEGLV-NYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGN 378 (542)
T ss_pred CchheeEEeecCcccCHHHHhhchhhhC-chHHH-Hhhhhhhhh-cccccCCchHheeecCCCcCCCcceeEEec-CCCC
Confidence 9999999999999999999999999998 88888 999999633 333222323444567888876 56788999 7999
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++|+.|+|.++||-...||+..++.+...|+.+|+|+|||+++++++|++.+.||.+|+|+.+|+||..+|
T Consensus 379 pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeE 451 (542)
T COG1021 379 PVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEE 451 (542)
T ss_pred CCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997654
No 79
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.5e-34 Score=287.79 Aligned_cols=229 Identities=22% Similarity=0.294 Sum_probs=199.0
Q ss_pred eeeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 4 ~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
+.+.++..++|++++.+|++|..++ ..++.++..|+++++.+. .++..+++.++++++|++.++|++++.|++...
T Consensus 1750 ~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~ 1828 (3956)
T PRK12467 1750 TQEAYQLSAADVVLQFTSFAFDVSV-WELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE 1828 (3956)
T ss_pred HHHhcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc
Confidence 3456788899999999999999998 688999999999999873 578999999999999999999999999987532
Q ss_pred cCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCC---CCCCCCCCccccCCCcEEEEE
Q 026609 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSF---AGSRNIGSAGALAPGVEALIV 157 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~~~ 157 (236)
....++++|.+++|||++++++.+.|.+.++...+++ .||+||++..++..... ........+|+|++++.+.++
T Consensus 1829 -~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vl 1906 (3956)
T PRK12467 1829 -QVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFN-LYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYIL 1906 (3956)
T ss_pred -ccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEe-CccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEE
Confidence 3346789999999999999999999999987677888 99999998766543221 112234679999999999999
Q ss_pred eCCCCCCCCCCCceEEEEecCccchhhcCCccccccccc-------CCCeEecCceEEEcCCCcEEEEcccCCceeeccE
Q 026609 158 SVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGF 230 (236)
Q Consensus 158 ~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~ 230 (236)
| +.++++|.|..|||+|+|++++.||+++++.+...|. ..+||+|||++++++||.++|+||+||+||++|+
T Consensus 1907 d-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~ 1985 (3956)
T PRK12467 1907 D-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGF 1985 (3956)
T ss_pred C-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeE
Confidence 8 6899999999999999999999999999999888772 2359999999999999999999999999999999
Q ss_pred EeecCC
Q 026609 231 QVTSNW 236 (236)
Q Consensus 231 ~i~p~~ 236 (236)
+|.|.|
T Consensus 1986 rIel~e 1991 (3956)
T PRK12467 1986 RIELGE 1991 (3956)
T ss_pred EechHH
Confidence 999875
No 80
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.1e-33 Score=242.80 Aligned_cols=223 Identities=28% Similarity=0.402 Sum_probs=194.2
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCC
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 88 (236)
.+.++|++++.+|++|..+....++.++..|+++++.+++++..+++.++++++|.+.++|++++.++..........+.
T Consensus 210 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 289 (517)
T PRK08008 210 ALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHC 289 (517)
T ss_pred CCCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcccccccc
Confidence 45778999999999999888788899999999999999999999999999999999999999999998765444444567
Q ss_pred ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCC
Q 026609 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 168 (236)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g 168 (236)
+|.+.++ .+++++..+.|.+.++ ..+++ .||+||++..+...... .......+|.|+++++++++| +++++++.|
T Consensus 290 l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g 364 (517)
T PRK08008 290 LREVMFY-LNLSDQEKDAFEERFG-VRLLT-SYGMTETIVGIIGDRPG-DKRRWPSIGRPGFCYEAEIRD-DHNRPLPAG 364 (517)
T ss_pred ceeeEEe-cCCCHHHHHHHHHHhC-CeEEe-eccccccccccccCCcc-ccccCCccccCCCCcEEEEEC-CCCCCCCCC
Confidence 8877765 4788999999999886 88888 99999998655543322 234456799999999999999 578999999
Q ss_pred CceEEEEec---CccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 169 QLGEIWLRG---PNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 169 ~~Gel~v~~---~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+.|||++++ +.++.+|+++++.+...+..+|||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 365 ~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 435 (517)
T PRK08008 365 EIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVE 435 (517)
T ss_pred CcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHH
Confidence 999999997 68999999999999988878899999999999999999999999999999999999864
No 81
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-33 Score=242.68 Aligned_cols=223 Identities=29% Similarity=0.407 Sum_probs=192.1
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--CCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~ 84 (236)
.++..+++++++.+|++|.+++ ...+.++..|+++++.+.+++..+++.++++++|.+.++|+++..+++.... ...
T Consensus 194 ~~~~~~~~~~l~~~p~~h~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~ 272 (511)
T PRK13391 194 LWGFRSDMVYLSPAPLYHSAPQ-RAVMLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKY 272 (511)
T ss_pred hcCCCCCCeEEEcCCHHHHHHH-HHHHHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccC
Confidence 3456778999999999999998 5667889999999999889999999999999999999999999988765432 233
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
+++++|.++.+|+++++++.+.+.+.++ ..+++ .||+||++.++.... ......++.+|+|.++ .++++| +++++
T Consensus 273 ~~~~l~~~~~gg~~~~~~~~~~~~~~~g-~~v~~-~YG~tE~~~~~~~~~-~~~~~~~~~vG~~~~g-~~~i~d-~~~~~ 347 (511)
T PRK13391 273 DLSSLEVAIHAAAPCPPQVKEQMIDWWG-PIIHE-YYAATEGLGFTACDS-EEWLAHPGTVGRAMFG-DLHILD-DDGAE 347 (511)
T ss_pred CccceeEEEEccCCCCHHHHHHHHHHcC-Cceee-eeccccccceEEecC-ccccccCCCcCCcccc-eEEEEC-CCCCC
Confidence 5789999999999999999999999887 77888 999999987655422 2123455789999999 688888 67899
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCC-CeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK-GWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.|+.|||+++++ .+.+|+++++.+...+..+ +||+|||+++++++|.+++.||.||++|++|.+|+|.|
T Consensus 348 ~~~g~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~e 419 (511)
T PRK13391 348 LPPGEPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQE 419 (511)
T ss_pred CCCCCceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHH
Confidence 99999999999999 8889999998887777554 89999999999999999999999999999999999864
No 82
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.8e-34 Score=244.59 Aligned_cols=223 Identities=26% Similarity=0.389 Sum_probs=189.3
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..++..++|+++..+|++|.+++ ..++.++..|+++++.+ .+++..+++.++++++|.+.++|+++..+++..+....
T Consensus 212 ~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~ 290 (539)
T PRK07008 212 DAMGLSARDAVLPVVPMFHVNAW-GLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGL 290 (539)
T ss_pred cccCCCCCceEEecCchHHhhhH-HHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCC
Confidence 35677889999999999999888 45577889999999874 57899999999999999999999999999988766667
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC---------CCCCCCCccccCCCcEEE
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA---------GSRNIGSAGALAPGVEAL 155 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~---------~~~~~~~~g~p~~~~~~~ 155 (236)
+++++|.++++|+++++++.++|.+.++ ..+++ .||+||++..+....... .......+|+|+|+++++
T Consensus 291 ~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~l~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~ 368 (539)
T PRK07008 291 RFSTLRRTVIGGSACPPAMIRTFEDEYG-VEVIH-AWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMK 368 (539)
T ss_pred CcccceEEEEcCCCCCHHHHHHHHHHhC-Cceec-ccccccccccceecccccccccCCchhhhhhcccCCccccceEEE
Confidence 7889999999999999999999999986 88999 999999987554322110 011235689999999999
Q ss_pred EEeCCCCCCCCCC--CceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 156 IVSVDTQKPLPPN--QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 156 ~~~~~~~~~~~~g--~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
++| +++++++.+ +.|||+++|+.++.+|++++.. .+ .+|||+|||+++++++|.+++.||.||+||++|++|+
T Consensus 369 i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~---~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~ 443 (539)
T PRK07008 369 IVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDAS---PL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWIS 443 (539)
T ss_pred EEC-CCCCccCCCCCcceEEEEeCCccchhhcCChhh---hh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEc
Confidence 999 467777753 5799999999999999998743 23 3689999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 444 p~e 446 (539)
T PRK07008 444 SID 446 (539)
T ss_pred HHH
Confidence 864
No 83
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3.1e-34 Score=290.86 Aligned_cols=228 Identities=19% Similarity=0.240 Sum_probs=197.1
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC--CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 82 (236)
...++..++|++++++|++|..++ ..++.++..|+++++.+. +++..+++.++++++|+++++|++++.|.+.....
T Consensus 2179 ~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 2257 (5163)
T PRK12316 2179 GERYELSPADCELQFMSFSFDGAH-EQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD 2257 (5163)
T ss_pred HHhcCCCCcceEEEecCchHHHHH-HHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc
Confidence 445778899999999999999888 789999999999988763 68999999999999999999999999998765332
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCC---CCCCCccccCCCcEEEEEeC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGS---RNIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~---~~~~~~g~p~~~~~~~~~~~ 159 (236)
. ..+++|.+++|||++++++++.|.+.++...+++ .||+||++..++........ .....+|+|++++++.++|
T Consensus 2258 ~-~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d- 2334 (5163)
T PRK12316 2258 G-RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFN-GYGPTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD- 2334 (5163)
T ss_pred c-CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEE-CccchhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-
Confidence 2 3458999999999999999999999887778888 99999998766543222111 1225789999999999999
Q ss_pred CCCCCCCCCCceEEEEecCccchhhcCCccccccccc-------CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEe
Q 026609 160 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 232 (236)
Q Consensus 160 ~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 232 (236)
++++++|.|..|||+|+|++++.||+++++.+...|. .++||+|||++++++||.++++||+||+||++|+||
T Consensus 2335 ~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~ri 2414 (5163)
T PRK12316 2335 ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRI 2414 (5163)
T ss_pred CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccC
Confidence 5789999999999999999999999999999988873 235999999999999999999999999999999999
Q ss_pred ecCC
Q 026609 233 TSNW 236 (236)
Q Consensus 233 ~p~~ 236 (236)
+|.|
T Consensus 2415 e~~e 2418 (5163)
T PRK12316 2415 ELGE 2418 (5163)
T ss_pred ChHH
Confidence 9976
No 84
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-34 Score=253.32 Aligned_cols=226 Identities=26% Similarity=0.410 Sum_probs=179.1
Q ss_pred cc-CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CC--CHHHHHHHHH--hcCceEEEeChHHHHHHHhcCC-
Q 026609 8 TA-GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KF--DLEMFLRAIE--KHRVTHIWVVPPLILALAKHGL- 80 (236)
Q Consensus 8 ~~-~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~--~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~- 80 (236)
++ +.++|++++++|++|..|+...++.++..|+++++.+ .+ ++..+++.++ +++++.++.+|+++..++....
T Consensus 229 ~~~~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~ 308 (612)
T PRK12476 229 IDLLDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGL 308 (612)
T ss_pred hccCCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcC
Confidence 44 6778999999999999999555555555555555443 23 7889999995 5899999999998888776421
Q ss_pred ---cCCCCCCCceEEeecCCCCCHHHHHHHHHhCC-----CCceeeccccccccccccccccCCCC--------------
Q 026609 81 ---VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQVGYGLTETSGIATMENSFAG-------------- 138 (236)
Q Consensus 81 ---~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~v~~~~YG~tE~g~~~~~~~~~~~-------------- 138 (236)
....+++++| ++++|+++++++.+.|.+.|+ ...+.+ .||+||++..+........
T Consensus 309 ~~~~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g 386 (612)
T PRK12476 309 PAEGDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKP-SYGIAEATLFVATIAPDAEPSVVYLDREQLGAG 386 (612)
T ss_pred hhhhcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCcccccc-ccchhhhheeeeccCCCCCceEEEEcHHHhhCC
Confidence 1234678999 999999999999999999873 234677 9999998765443211100
Q ss_pred -----------CCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCccccccccc-----------
Q 026609 139 -----------SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID----------- 196 (236)
Q Consensus 139 -----------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~----------- 196 (236)
......+|+|+++++++++|++++++++.|+.|||+++|+.++.+|+++++.+...|.
T Consensus 387 ~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~ 466 (612)
T PRK12476 387 RAVRVAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGS 466 (612)
T ss_pred CeeecCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhcccccccc
Confidence 0012468999999999999966599999999999999999999999999998877763
Q ss_pred -------CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 197 -------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 197 -------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.++||+|||+|++ ++|++++.||+||+||++|++|+|+|
T Consensus 467 ~~~~~~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~e 512 (612)
T PRK12476 467 HADGAADDGTWLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQD 512 (612)
T ss_pred ccccccCCCCeeecccccee-ECCEEEEEeccCcEEEECCcccCHHH
Confidence 1359999999998 59999999999999999999999975
No 85
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.3e-33 Score=241.52 Aligned_cols=226 Identities=19% Similarity=0.253 Sum_probs=192.6
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 83 (236)
.++...+|++++.+|++|..++ ..++.++..|+++++.++ .++..+++.+++++++.+.++|+++..++.......
T Consensus 176 ~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~ 254 (502)
T TIGR01734 176 DFPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQ 254 (502)
T ss_pred hCCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccccc
Confidence 3567788999999999999988 678899999999999874 578999999999999999999999988776654455
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccC-C--CCCCCCCCccccCCCcEEEEEeCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENS-F--AGSRNIGSAGALAPGVEALIVSVD 160 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~-~--~~~~~~~~~g~p~~~~~~~~~~~~ 160 (236)
..++++|.++++|+++++++.+.+.+.+++..+++ .||+||++........ . ........+|.|.++++++++| +
T Consensus 255 ~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~ 332 (502)
T TIGR01734 255 ENYPHLTHFLFCGEELPVKTAKALLERFPKATIYN-TYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-E 332 (502)
T ss_pred ccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEe-CccCCcceEEEEEEEccccccccCCccccccccCCCEEEEEC-C
Confidence 67889999999999999999999999998788889 9999998754432211 1 1122335689999999999999 4
Q ss_pred CCCCCCCCCceEEEEecCccchhhcCCcccccccc---cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 161 TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 161 ~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++++|+.|||+++++.++.+|+++++.+...+ ...+||+|||+++++++ ++++.||.+|+|+++|++|+|+|
T Consensus 333 ~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~ 410 (502)
T TIGR01734 333 EGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELED 410 (502)
T ss_pred CCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHH
Confidence 68999999999999999999999999988877665 23369999999999877 99999999999999999999974
No 86
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=5.6e-34 Score=287.05 Aligned_cols=227 Identities=23% Similarity=0.295 Sum_probs=199.2
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC---CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
...+++.++|++++.+|++|..++ ..++.++..|+++++.+ ..++..+++.++++++|++.++|++++.|.+...
T Consensus 1306 ~~~~~~~~~d~~l~~~~~~fd~s~-~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~- 1383 (4334)
T PRK05691 1306 QATYALDDSDVLMQKAPISFDVSV-WECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL- 1383 (4334)
T ss_pred HHhcCCCCCCEEEEeCCccHHHHH-HHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc-
Confidence 345778899999999999999998 68899999999999986 3689999999999999999999999999987542
Q ss_pred CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCC
Q 026609 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
...++++|.+++|||++++++.+.|.+.+++..+++ .||+||++..++.............+|+|++++.++++| +.
T Consensus 1384 -~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~ 1460 (4334)
T PRK05691 1384 -AAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHN-RYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AE 1460 (4334)
T ss_pred -cccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEe-CCCcChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CC
Confidence 346789999999999999999999999998788888 999999987665433222233456799999999999999 57
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccC-------CCeEecCceEEEcCCCcEEEEcccCCceeeccEEeec
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK-------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 234 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p 234 (236)
++++|.|..|||+|+|+.++.||+++++.+...|.. .+||+|||++++++||.++++||+||+||++|++|.|
T Consensus 1461 ~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~ 1540 (4334)
T PRK05691 1461 LNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEP 1540 (4334)
T ss_pred CCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCH
Confidence 899999999999999999999999999998887732 3599999999999999999999999999999999998
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 1541 ~e 1542 (4334)
T PRK05691 1541 EE 1542 (4334)
T ss_pred HH
Confidence 75
No 87
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=8.8e-34 Score=249.25 Aligned_cols=222 Identities=33% Similarity=0.441 Sum_probs=180.4
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc-------
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV------- 81 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 81 (236)
...++|++++.+|++|.++... ...++..|+++++.+. ++..+++.+++.++|++.++|.+++.+.+....
T Consensus 262 ~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~ 339 (660)
T PLN02430 262 KMTHDDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNP 339 (660)
T ss_pred CCCCCCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCH
Confidence 4567899999999999999854 4567899999988653 778899999999999999999999877652100
Q ss_pred ------------------------CCCC-------------C-CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccc
Q 026609 82 ------------------------KKFD-------------L-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGL 123 (236)
Q Consensus 82 ------------------------~~~~-------------l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~ 123 (236)
.... + +++|.+++||+++++++.+.++ .++...+++ .||+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~-~YG~ 417 (660)
T PLN02430 340 RRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQ-GYGL 417 (660)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeee-ecch
Confidence 0000 1 5799999999999999866554 544467888 9999
Q ss_pred cccccccccccCCCCCCCCCCccccCCCcEEEEEeC-CCC-CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeE
Q 026609 124 TETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQ-KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWV 201 (236)
Q Consensus 124 tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~-~~~-~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (236)
||++...+...... ...++++|+|.+++++++++. +.+ .+++.+..|||+|+|+.++.||+++++.+...+ .+|||
T Consensus 418 TE~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~ 495 (660)
T PLN02430 418 TETLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWF 495 (660)
T ss_pred hhhhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hccce
Confidence 99987655433221 334678999999999999873 333 556667789999999999999999999998888 68999
Q ss_pred ecCceEEEcCCCcEEEEcccCCceee-ccEEeecCC
Q 026609 202 HTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 236 (236)
Q Consensus 202 ~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~~ 236 (236)
+|||++++++||++++.||++|+||+ +|++|+|+|
T Consensus 496 ~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~ 531 (660)
T PLN02430 496 HTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEY 531 (660)
T ss_pred eccceEEECCCCcEEEEEcccccEEcCCCcEEchHH
Confidence 99999999999999999999999997 799999974
No 88
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1e-33 Score=247.53 Aligned_cols=212 Identities=26% Similarity=0.297 Sum_probs=177.2
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCH---HHHHHHHHhcCceEEEeChHHHHHHHhcCCc----CC
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDL---EMFLRAIEKHRVTHIWVVPPLILALAKHGLV----KK 83 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~~ 83 (236)
++|++++.+|++|.+|+...++.+++.|+++++.+. +++ ..+++.++++++|.++++|+++..|++.... ..
T Consensus 251 ~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~ 330 (614)
T PRK08180 251 EPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRR 330 (614)
T ss_pred CCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhh
Confidence 568999999999999987788899999999999763 443 4678889999999999999999998875322 23
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHh----CC-CCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKN----VP-SATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~----~~-~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 158 (236)
..++++|.+++||+++++++.+.+.+. ++ ...+++ .||+||++.++...... ....+.+|+|+++++++++|
T Consensus 331 ~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~-~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d 407 (614)
T PRK08180 331 RFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMT-GLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVP 407 (614)
T ss_pred hhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeee-eecccccCCceEecccc--cCCCCcccCccCCcEEEEec
Confidence 357899999999999999999999875 33 256777 99999998766543322 34567899999999999997
Q ss_pred CCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEE----cCCCcEEEEcccCCceee-ccEEee
Q 026609 159 VDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF----DGDGQLYVVDRIKELIKY-KGFQVT 233 (236)
Q Consensus 159 ~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~----~~~g~~~~~GR~~d~i~~-~G~~i~ 233 (236)
+ |..|||+++|+.++.||+++++.+...|+.+|||+|||++++ +++|++++.||++|+|++ +|++|+
T Consensus 408 ~--------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~ 479 (614)
T PRK08180 408 V--------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVS 479 (614)
T ss_pred C--------CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEec
Confidence 3 345999999999999999999999888877899999999999 468999999999998886 798877
Q ss_pred c
Q 026609 234 S 234 (236)
Q Consensus 234 p 234 (236)
|
T Consensus 480 ~ 480 (614)
T PRK08180 480 V 480 (614)
T ss_pred c
Confidence 4
No 89
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-33 Score=240.97 Aligned_cols=220 Identities=29% Similarity=0.451 Sum_probs=192.9
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--CCCCCCC
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFDLSS 88 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~ 88 (236)
..++++++.+|++|.+++ ...+.++..|+++++.+.+++..+++.++++++|.+.++|+++..+++..+. ...++++
T Consensus 185 ~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 263 (502)
T PRK08276 185 GPDSVYLSPAPLYHTAPL-RFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSS 263 (502)
T ss_pred CCCCEEEEcCcHHHHHHH-HHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCccc
Confidence 467899999999999998 4555789999999999889999999999999999999999999999876542 3346789
Q ss_pred ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCC
Q 026609 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 168 (236)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g 168 (236)
+|.++++|+++++++.+++.+.++ ..+.+ .||+||++.++..... ......+.+|+|+ ++.++++| +++++++.|
T Consensus 264 lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~-~yG~tE~~~~~~~~~~-~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g 338 (502)
T PRK08276 264 LRVAIHAAAPCPVEVKRAMIDWWG-PIIHE-YYASSEGGGVTVITSE-DWLAHPGSVGKAV-LGEVRILD-EDGNELPPG 338 (502)
T ss_pred ceEEEecCCCCCHHHHHHHHHHhC-cHhhh-hcccccccceeEecCc-cccccCCCcceec-ccEEEEEC-CCCCCCcCC
Confidence 999999999999999999999886 66777 9999999886654322 2234456889999 88999998 568999999
Q ss_pred CceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 169 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 169 ~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+.|||+++++.++.+|+++++.+...+..++||+|||+++++++|.+++.||.||++|++|.+|+|+|
T Consensus 339 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~ 406 (502)
T PRK08276 339 EIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQE 406 (502)
T ss_pred CceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHH
Confidence 99999999999999999999999888877799999999999999999999999999999999999864
No 90
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2e-33 Score=243.44 Aligned_cols=220 Identities=31% Similarity=0.517 Sum_probs=191.2
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceE
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 91 (236)
+++++..+|++|.+++....+.++..|++.++.+ .+++..+++.++++++|.+.++|+.+..+.+.......+++++|.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 333 (560)
T PRK08751 254 CEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKM 333 (560)
T ss_pred CceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhhee
Confidence 4678889999999998666667777777766654 578999999999999999999999999998876555567889999
Q ss_pred EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCce
Q 026609 92 VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLG 171 (236)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~G 171 (236)
++++|+++++++.+.|++.++ ..+++ .||+||++..+...... .....+.+|.|.+++.++++| +++++++.|+.|
T Consensus 334 v~~gG~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~G 409 (560)
T PRK08751 334 TLGGGMAVQRSVAERWKQVTG-LTLVE-AYGLTETSPAACINPLT-LKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIG 409 (560)
T ss_pred eeeCCCCCCHHHHHHHHHHhC-CeEEE-eeccccCCCceeccccc-ccccCCCcCccCCCceEEEEC-CCCCCCCCCCce
Confidence 999999999999999999886 78888 99999998766543321 123456789999999999999 688999999999
Q ss_pred EEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 172 EIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 172 el~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
||+++++.++.+|+++++.+...+..+|||+|||+++++++|.+++.||.||+|+++|++|+|.|
T Consensus 410 el~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~e 474 (560)
T PRK08751 410 ELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNE 474 (560)
T ss_pred EEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHH
Confidence 99999999999999999998888877899999999999999999999999999999999999864
No 91
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-33 Score=247.29 Aligned_cols=225 Identities=17% Similarity=0.163 Sum_probs=185.2
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC-
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL- 80 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~- 80 (236)
..+++.++|++++..++.|..+. .+++++..|+++++.+. +++..+++.++++++|.+..+|++++.+.+...
T Consensus 298 ~~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 375 (655)
T PRK03584 298 LHCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLV 375 (655)
T ss_pred HhcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCC
Confidence 45678889999999999998654 45689999999999752 579999999999999999999999999877532
Q ss_pred -cCCCCCCCceEEeecCCCCCHHHHHHHHHhCC-CCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe
Q 026609 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 81 -~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 158 (236)
....+++++|.++++|+++++++.+++.+.++ +..+.+ .||+||++........ .....++.+|.|.++++++++|
T Consensus 376 ~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~-~yG~TE~~~~~~~~~~-~~~~~~g~~g~p~~g~~~~ivd 453 (655)
T PRK03584 376 PGETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLAS-ISGGTDICSCFVGGNP-LLPVYRGEIQCRGLGMAVEAWD 453 (655)
T ss_pred ccccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEe-ccChHhhhcccccCCC-CCCcCCCccCCCcCCceeEEEC
Confidence 23457889999999999999999999999984 466777 9999998644332211 1134457789999999999999
Q ss_pred CCCCCCCCCCCceEEEEecC--ccchhhcCCccccc--ccc--cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEe
Q 026609 159 VDTQKPLPPNQLGEIWLRGP--NMMRGYYNNEQATK--LTI--DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 232 (236)
Q Consensus 159 ~~~~~~~~~g~~Gel~v~~~--~~~~~~~~~~~~~~--~~~--~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 232 (236)
++++++ .|+.|||+++++ +++.+|+++++.+. ..+ ..++||+|||++++|+||.+++.||.||+||++|++|
T Consensus 454 -~~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI 531 (655)
T PRK03584 454 -EDGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRI 531 (655)
T ss_pred -CCCCCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEE
Confidence 567888 799999999995 78899999887432 111 1257899999999999999999999999999999999
Q ss_pred ecCC
Q 026609 233 TSNW 236 (236)
Q Consensus 233 ~p~~ 236 (236)
+|.|
T Consensus 532 ~p~E 535 (655)
T PRK03584 532 GTAE 535 (655)
T ss_pred CHHH
Confidence 9975
No 92
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=8.6e-34 Score=239.11 Aligned_cols=217 Identities=33% Similarity=0.493 Sum_probs=187.0
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcC-------------
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG------------- 79 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------- 79 (236)
+|++++.+|+.|++..... ...++.|+++.+.. .|+..+.+.+++.++|.+.++|.+++.+-+..
T Consensus 302 ~dv~lSyLPLAHi~er~~~-~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~ 379 (691)
T KOG1256|consen 302 DDVYLSYLPLAHIFERVVE-LYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRK 379 (691)
T ss_pred CceEEEeCcHHHHHHHHHH-HhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHH
Confidence 6999999999999999544 45568899999987 48888888899999999999999887553310
Q ss_pred ---------C----cCCCCC-------------------CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccc
Q 026609 80 ---------L----VKKFDL-------------------SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETS 127 (236)
Q Consensus 80 ---------~----~~~~~l-------------------~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g 127 (236)
. ...... ..+|.+++|++|+++++.+.++..++ +.+++ .||+||+.
T Consensus 380 l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-~~v~e-GYGlTEts 457 (691)
T KOG1256|consen 380 LFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-CRVLE-GYGLTETS 457 (691)
T ss_pred HHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC-ceeee-cccccccC
Confidence 0 001111 27899999999999999999999986 89999 99999998
Q ss_pred cccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceE
Q 026609 128 GIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLG 207 (236)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~ 207 (236)
+.++..... +...+++|.|+|+.+++++|+.+.+.-+.|..|||||+|+.++.||+.||+.|.+.++.+||++|||+|
T Consensus 458 ~g~~~~~~~--d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG 535 (691)
T KOG1256|consen 458 AGTTLTLPG--DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIG 535 (691)
T ss_pred CceEeccCC--CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccce
Confidence 555554443 236789999999999999998888888888899999999999999999999999999999999999999
Q ss_pred EEcCCCcEEEEcccCCceee-ccEEeecC
Q 026609 208 YFDGDGQLYVVDRIKELIKY-KGFQVTSN 235 (236)
Q Consensus 208 ~~~~~g~~~~~GR~~d~i~~-~G~~i~p~ 235 (236)
+++++|.+.++||+++++|+ .|++|.|+
T Consensus 536 ~~~p~G~l~IidRkK~ifklaqGEyVaPe 564 (691)
T KOG1256|consen 536 EWDPNGTLKIIDRKKNIFKLAQGEYVAPE 564 (691)
T ss_pred eECCCccEEEEecccceEEcCCCCccChH
Confidence 99999999999999999999 89999986
No 93
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4e-33 Score=239.92 Aligned_cols=221 Identities=26% Similarity=0.351 Sum_probs=187.0
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...+++.++|++++.+|++|..++...++.++..|+++++.+++++..+++.++++++|.+.++|+.+..++...+....
T Consensus 185 ~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~ 264 (529)
T PRK07867 185 AQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDD 264 (529)
T ss_pred HHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccc
Confidence 34567788999999999999999977788899999999999889999999999999999999999999998876543333
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
..+++|. +.||+.+++.. +.|.+.++ ..+++ .||+||++..+.... ....+.+|.|.++ +++++++++++
T Consensus 265 ~~~~lr~-~~gg~~~~~~~-~~~~~~~g-~~l~~-~YG~TE~~~~~~~~~----~~~~~~~g~~~~~--~~i~~~~~~~~ 334 (529)
T PRK07867 265 ADNPLRI-VYGNEGAPGDI-ARFARRFG-CVVVD-GFGSTEGGVAITRTP----DTPPGALGPLPPG--VAIVDPDTGTE 334 (529)
T ss_pred cccceEE-EecCCCChHHH-HHHHHHhC-CcEEE-eecccccccccccCC----CCCCCCcCCCCCC--EEEEECCCCCC
Confidence 3457774 55788887664 67777886 88888 999999986654321 2234578999998 67788778888
Q ss_pred CCCCC------------ceEEEE-ecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEE
Q 026609 165 LPPNQ------------LGEIWL-RGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 231 (236)
Q Consensus 165 ~~~g~------------~Gel~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 231 (236)
++.|+ .|||++ ++++++.+|+++++.+...+ .+|||+|||+++++++|.+++.||.||+|+++|++
T Consensus 335 ~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~ 413 (529)
T PRK07867 335 CPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGEN 413 (529)
T ss_pred CCCCccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEE
Confidence 99888 899998 99999999999999887777 68999999999999999999999999999999999
Q ss_pred eecCC
Q 026609 232 VTSNW 236 (236)
Q Consensus 232 i~p~~ 236 (236)
|+|.|
T Consensus 414 v~p~e 418 (529)
T PRK07867 414 LGTAP 418 (529)
T ss_pred eCHHH
Confidence 99865
No 94
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=4.5e-33 Score=246.52 Aligned_cols=224 Identities=17% Similarity=0.153 Sum_probs=182.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
++++++|++++.+|++|+++. ..++++|..|++++++++ +++..++++++++++|++..+|++++.|.+.......++
T Consensus 392 ~~l~~~d~~~~~~~l~w~~g~-~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dl 470 (728)
T PLN03052 392 LDIRKGDIVCWPTNLGWMMGP-WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDW 470 (728)
T ss_pred cCCCCCcEEEECCCcHHHhHH-HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCCh
Confidence 577889999999999999998 678899999999999874 566789999999999999999999999988764456688
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|++++++...++.+.++...+.+ .||+||++......... ....++.+|.|.+|++++++| ++|++++
T Consensus 471 ssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~-~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~v~d-~~g~~v~ 547 (728)
T PLN03052 471 SSIRCFGSTGEASSVDDYLWLMSRAGYKPIIE-YCGGTELGGGFVTGSLL-QPQAFAAFSTPAMGCKLFILD-DSGNPYP 547 (728)
T ss_pred hheeEEEecCCCCCHHHHHHHHHhcCCCCeEe-eccChhhCcccccCCCC-CCCCCCccccCCCCceEEEEC-CCCCCCC
Confidence 99999999999999999888888776456777 99999997654432221 133457789999999999999 6899999
Q ss_pred CCC--ceEEEEecCc--cchhhcCCccccccccc------CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQ--LGEIWLRGPN--MMRGYYNNEQATKLTID------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~--~Gel~v~~~~--~~~~~~~~~~~~~~~~~------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+ .|||+++++. ...+|+++. .....|. ...||+|||+++++++|++++.||.||+||++|+||+|.|
T Consensus 548 ~g~~~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~E 626 (728)
T PLN03052 548 DDAPCTGELALFPLMFGASSTLLNAD-HYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVE 626 (728)
T ss_pred CCCCceEEEEEeCCCCCCCccccCch-hhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHH
Confidence 986 5999997642 223455542 2222221 2238999999999999999999999999999999999976
No 95
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.5e-33 Score=245.55 Aligned_cols=213 Identities=25% Similarity=0.280 Sum_probs=176.7
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCH---HHHHHHHHhcCceEEEeChHHHHHHHhcCCcC----CC
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDL---EMFLRAIEKHRVTHIWVVPPLILALAKHGLVK----KF 84 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~ 84 (236)
.+++++++|++|.+|+...++.++..|+++++.++ +++ ..+++.++++++|.++++|+++..|++..... ..
T Consensus 264 ~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 343 (624)
T PRK12582 264 PPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRS 343 (624)
T ss_pred CceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHH
Confidence 58999999999999987778889999999999763 333 35677789999999999999999887643222 12
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhC----C-CCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNV----P-SATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~----~-~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 159 (236)
.++++|.+++||+++++++.++|.+.+ + +..+++ .||+||++.++...... ....+.+|+|++++++++++
T Consensus 344 ~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~-~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~- 419 (624)
T PRK12582 344 FFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYT-GYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLAP- 419 (624)
T ss_pred HhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEe-ccccccccceeecccCC--CCCCCCCCcCCCCcEEEEcc-
Confidence 467999999999999999999998863 3 256787 99999998766532221 34567899999999999864
Q ss_pred CCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEE-c---CCCcEEEEcccCCceee-ccEEeec
Q 026609 160 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF-D---GDGQLYVVDRIKELIKY-KGFQVTS 234 (236)
Q Consensus 160 ~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~-~---~~g~~~~~GR~~d~i~~-~G~~i~p 234 (236)
.|+.|||+++|+.++.+|+++++.+...|..+|||+|||++++ + ++|++++.||+||+|++ +|++|+|
T Consensus 420 -------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p 492 (624)
T PRK12582 420 -------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSV 492 (624)
T ss_pred -------CCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEech
Confidence 4778999999999999999999999888877899999999998 4 46899999999999996 7999998
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 493 ~~ 494 (624)
T PRK12582 493 GT 494 (624)
T ss_pred HH
Confidence 63
No 96
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-32 Score=238.86 Aligned_cols=221 Identities=32% Similarity=0.513 Sum_probs=193.2
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCc
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSL 89 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l 89 (236)
..+++++..+|++|.+++....+.++..|+++++.. ..++..+++.++++++|.+.++|++++.|.+........++++
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 327 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSL 327 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccce
Confidence 446788999999999998777788888898877754 5678899999999999999999999999988765555677899
Q ss_pred eEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCC
Q 026609 90 KLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 169 (236)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~ 169 (236)
|.++.+|+++++.+.+.|++.++ ..+.+ .||+||++.+...+... .......+|.|++++.++++|+ ++++++.|+
T Consensus 328 r~~~~gg~~~~~~~~~~~~~~~g-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~ 403 (560)
T PRK08974 328 KLSVGGGMAVQQAVAERWVKLTG-QYLLE-GYGLTECSPLVSVNPYD-LDYYSGSIGLPVPSTEIKLVDD-DGNEVPPGE 403 (560)
T ss_pred eEEEecCccCCHHHHHHHHHHhC-CcEEe-eecccccCceeeccCCC-CcccCCccccCcCCCEEEEECC-CCCCCCCCC
Confidence 99999999999999999999886 78888 99999998776654332 2344567999999999999994 789999999
Q ss_pred ceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 170 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 170 ~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|||+++++.++.+|+++++.+...+ .+|||+|||+++++++|.+++.||.||+|+++|.+|+|.|
T Consensus 404 ~Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~ 469 (560)
T PRK08974 404 PGELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNE 469 (560)
T ss_pred ceEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHH
Confidence 99999999999999999988887777 6899999999999999999999999999999999999864
No 97
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=5.7e-33 Score=244.10 Aligned_cols=224 Identities=17% Similarity=0.162 Sum_probs=179.3
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcC--C
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHG--L 80 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~ 80 (236)
.+++.++|++++.+|+.|..+. .+++++..|+++++.+. .++..++++++++++|.+...|++++.+.+.. .
T Consensus 300 ~~~~~~~d~~~~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~ 377 (652)
T TIGR01217 300 HCDLGPGDRLFYYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHP 377 (652)
T ss_pred ccCCCCCcEEEEeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCc
Confidence 4678899999999999998643 35589999999999852 36889999999999999988887777765532 1
Q ss_pred cCCCCCCCceEEeecCCCCCHHHHHHHHHhCCC-CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeC
Q 026609 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS-ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~-~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 159 (236)
....+++++|.++++|+++++++.+++.+.++. ..+.+ .||+||++......... .....+.+|.|.++++++++|
T Consensus 378 ~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~-~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~ivd- 454 (652)
T TIGR01217 378 ARTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLAS-ISGGTDICSCFAGANPT-LPVHIGEIQAPGLGTAVQSWD- 454 (652)
T ss_pred cccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEe-ccCHHHHhccccCCCCC-CCCcCCccCCCcCCCceEEEC-
Confidence 234578999999999999999999999998863 33445 89999975433322111 133456788999999999999
Q ss_pred CCCCCCCCCCceEEEEecC--ccchhhcCCccccc--cc-c-cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 160 DTQKPLPPNQLGEIWLRGP--NMMRGYYNNEQATK--LT-I-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 160 ~~~~~~~~g~~Gel~v~~~--~~~~~~~~~~~~~~--~~-~-~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
++|+++ .|+.|||+++++ +++.+||++++.+. .. + ..+|||+|||++++|+||++++.||+||+||++|++|+
T Consensus 455 ~~g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~ 533 (652)
T TIGR01217 455 PEGKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMG 533 (652)
T ss_pred CCCCCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcC
Confidence 577777 599999999996 68899999987543 12 2 12689999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 534 p~E 536 (652)
T TIGR01217 534 SAE 536 (652)
T ss_pred HHH
Confidence 975
No 98
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.4e-32 Score=235.15 Aligned_cols=227 Identities=22% Similarity=0.283 Sum_probs=194.5
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 82 (236)
+.++...+|++++.+|++|..++ ..++.++..|+++++.++ .++..+++.+++++++.+..+|+++..++......
T Consensus 177 ~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~ 255 (503)
T PRK04813 177 EDFALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFN 255 (503)
T ss_pred HHcCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccC
Confidence 34567788999999999999998 677899999999999875 57899999999999999999999998877665555
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCC---CCCCCCCCccccCCCcEEEEEeC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSF---AGSRNIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~~~~~ 159 (236)
...++++|.++++|+++++++.+++.+.+++..+++ .||+||++......... ........+|+|.++++++++|
T Consensus 256 ~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d- 333 (503)
T PRK04813 256 EEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYN-TYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID- 333 (503)
T ss_pred cccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEe-CcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-
Confidence 567889999999999999999999999997688888 99999997654432211 1123345689999999999999
Q ss_pred CCCCCCCCCCceEEEEecCccchhhcCCccccccccc---CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 160 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 160 ~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.+++.|+.|||+++++.++.+|+++++.+...|. ..+||+|||++++ ++|++++.||.+|+|+++|++|+|.|
T Consensus 334 ~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~ 412 (503)
T PRK04813 334 EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEE 412 (503)
T ss_pred CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHH
Confidence 6889999999999999999999999999988877662 2359999999999 99999999999999999999999964
No 99
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.8e-33 Score=251.79 Aligned_cols=218 Identities=21% Similarity=0.265 Sum_probs=176.0
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.+++.++|++++.+|++|.+++...++.++..|+++++.+++++..+++.++++++|+++++|++++.|++.......++
T Consensus 640 ~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~ 719 (994)
T PRK07868 640 AAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGN 719 (994)
T ss_pred hcCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCC
Confidence 45678899999999999999996667777888888888888999999999999999999999999999988654444567
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCc-EEEEE--e-----
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGV-EALIV--S----- 158 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~-~~~~~--~----- 158 (236)
+++|.++ |+.++++++++|.+.++...+++ .||+||++.+.... . ..+.+++|+|++++ ++++. |
T Consensus 720 ~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~-~YG~TE~~~~~~~~--~--~~~~~svG~p~pg~~~v~i~~~d~~~g~ 792 (994)
T PRK07868 720 HPVRLFI--GSGMPTGLWERVVEAFAPAHVVE-FFATTDGQAVLANV--S--GAKIGSKGRPLPGAGRVELAAYDPEHDL 792 (994)
T ss_pred CceEEEe--cCCCCHHHHHHHHHHhCchheee-eeeccccccccccc--C--CCCCcccCCccCCCCceeEEEecCcCCc
Confidence 7899876 34599999999999998778888 99999987654321 1 23557899999997 56553 1
Q ss_pred ---CCCC--CCCCCCCceEEEEecCccchhhcCCcccc--cccc-cCCCeEecCceEEEcCCCcEEEEcccCCceeeccE
Q 026609 159 ---VDTQ--KPLPPNQLGEIWLRGPNMMRGYYNNEQAT--KLTI-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGF 230 (236)
Q Consensus 159 ---~~~~--~~~~~g~~Gel~v~~~~~~~~~~~~~~~~--~~~~-~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~ 230 (236)
.++| +.++.|+.|||+++++... +++.+ ...| ..+|||+|||++++|+||+++|+||+||+||++|+
T Consensus 793 li~d~~G~~~~~~~ge~Gel~~~~~~~~-----~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~ 867 (994)
T PRK07868 793 ILEDDRGFVRRAEVNEVGVLLARARGPI-----DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARG 867 (994)
T ss_pred eeecCCceEEEcCCCCceEEEEecCCCC-----ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCc
Confidence 1345 5678899999999987532 33322 1123 24799999999999999999999999999999999
Q ss_pred EeecCC
Q 026609 231 QVTSNW 236 (236)
Q Consensus 231 ~i~p~~ 236 (236)
+|+|+|
T Consensus 868 ~I~p~E 873 (994)
T PRK07868 868 PVYTEP 873 (994)
T ss_pred eEcHHH
Confidence 999976
No 100
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.3e-33 Score=279.54 Aligned_cols=226 Identities=18% Similarity=0.216 Sum_probs=198.2
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
...+++.++|++++..++.+..++ ..++.++..|+++++.+. .++..+++.++++++|++.++|++++.++...
T Consensus 3902 ~~~~~~~~~~~~~~~~s~~fd~s~-~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~-- 3978 (4334)
T PRK05691 3902 VPYLALSEADVIAQTASQSFDISV-WQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED-- 3978 (4334)
T ss_pred HHhcCCCccceEEEecCCchhHHH-HHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc--
Confidence 455788999999999999999999 789999999999999874 57899999999999999999999999887642
Q ss_pred CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC--CCCCCCCccccCCCcEEEEEeC
Q 026609 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA--GSRNIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~--~~~~~~~~g~p~~~~~~~~~~~ 159 (236)
...++++|.++.+||++++++.+.|.+.+++..+++ .||+||++..++...... .......+|+|++++.+.++|
T Consensus 3979 -~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d- 4055 (4334)
T PRK05691 3979 -RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVN-AYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD- 4055 (4334)
T ss_pred -cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEe-CccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-
Confidence 335689999999999999999999999888788988 999999988665432221 122334699999999999998
Q ss_pred CCCCCCCCCCceEEEEecCccchhhcCCccccccccc-------CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEe
Q 026609 160 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 232 (236)
Q Consensus 160 ~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~-------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 232 (236)
+.++++|.|..|||+|+|+.++.||+++++.+...|. ..+||+|||++++++||.++|+||+|++||++|++|
T Consensus 4056 ~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~ri 4135 (4334)
T PRK05691 4056 EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRI 4135 (4334)
T ss_pred CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEe
Confidence 6899999999999999999999999999999998883 346999999999999999999999999999999999
Q ss_pred ecCC
Q 026609 233 TSNW 236 (236)
Q Consensus 233 ~p~~ 236 (236)
.|.|
T Consensus 4136 el~e 4139 (4334)
T PRK05691 4136 ELGE 4139 (4334)
T ss_pred cHHH
Confidence 9865
No 101
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-32 Score=237.40 Aligned_cols=222 Identities=24% Similarity=0.318 Sum_probs=182.7
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...++..++|+++..+|++|..++...++.++..|+++++.+.+++..+++.+++++++.+..+|+.+..++........
T Consensus 183 ~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~ 262 (540)
T PRK13388 183 TERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDD 262 (540)
T ss_pred HHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccc
Confidence 34567888999999999999999966667789999999998888999999999999999999999999988876543222
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEE---------
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEAL--------- 155 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~--------- 155 (236)
..+.+|.+ .|+.++++..+.|.+.++ ..+++ .||+||++.++.... ....+.+|+|++++++.
T Consensus 263 ~~~~l~~~--~G~~~~~~~~~~~~~~~~-~~l~~-~YG~tE~~~~~~~~~----~~~~~~vG~p~~g~~i~~~~~~~~~~ 334 (540)
T PRK13388 263 ADNPLRVA--FGNEASPRDIAEFSRRFG-CQVED-GYGSSEGAVIVVREP----GTPPGSIGRGAPGVAIYNPETLTECA 334 (540)
T ss_pred cccceEEE--ECCCCCHHHHHHHHHHhC-Cceec-ccccccccceeecCC----CCCCCCCCCCCCCcEEEcCCCCcccc
Confidence 33456643 366778888899999886 78888 999999987665422 23456789999997653
Q ss_pred --EEeCCCCCCC-CCCCceEEEEe-cCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEE
Q 026609 156 --IVSVDTQKPL-PPNQLGEIWLR-GPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 231 (236)
Q Consensus 156 --~~~~~~~~~~-~~g~~Gel~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 231 (236)
++| ++|+++ +++..|||+++ |+.++.+|+++++.+...+ .+|||+|||+++++++|++++.||+||+||++|++
T Consensus 335 ~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~ 412 (540)
T PRK13388 335 VARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGEN 412 (540)
T ss_pred ceecc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCceeccceEEEcCCCcEEEeccCCceEEECCEE
Confidence 333 344444 45678999998 9999999999999888777 67899999999999999999999999999999999
Q ss_pred eecCC
Q 026609 232 VTSNW 236 (236)
Q Consensus 232 i~p~~ 236 (236)
|+|.|
T Consensus 413 v~p~e 417 (540)
T PRK13388 413 LSAAP 417 (540)
T ss_pred eCHHH
Confidence 99975
No 102
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.9e-32 Score=254.16 Aligned_cols=221 Identities=24% Similarity=0.414 Sum_probs=187.5
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 83 (236)
...++..++|++++.+|++|.+++...++.++..|+++++.+. .+...+.+.++++++|.+..+|++++.+.+.. ..
T Consensus 826 ~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~ 903 (1140)
T PRK06814 826 AARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HP 903 (1140)
T ss_pred HHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--cc
Confidence 3456778899999999999999997788899999999999874 56778899999999999999999999887753 34
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
.+++++|.++++|+++++++.+.+.+.++ .++.+ .||+||++..+...... ....+.+|+|.+++++++.+.+ +
T Consensus 904 ~~~~~lr~v~~gg~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~~-~- 977 (1140)
T PRK06814 904 YDFRSLRYVFAGAEKVKEETRQTWMEKFG-IRILE-GYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPVP-G- 977 (1140)
T ss_pred ccccceeEEEEcCCcCCHHHHHHHHHHhC-CcEEe-ccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeecC-C-
Confidence 56789999999999999999999999986 78888 99999998776543322 3446789999999999998742 2
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.++.|||+++|+.++.+|+++++........+|||+|||++++|+||++++.||.||+||++|++|+|.|
T Consensus 978 ---~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~e 1047 (1140)
T PRK06814 978 ---IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAA 1047 (1140)
T ss_pred ---CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHH
Confidence 3677999999999999999876543222235789999999999999999999999999999999999975
No 103
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-32 Score=238.03 Aligned_cols=225 Identities=24% Similarity=0.362 Sum_probs=187.9
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
.+++.++|++++.+|++|.+++ ...+.++..|+++++.+ .+++..+++.+++++++.++++|+++..++.........
T Consensus 218 ~~~~~~~~~~l~~~pl~h~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 296 (576)
T PRK05620 218 SLAVTHGESFLCCVPIYHVLSW-GVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPE 296 (576)
T ss_pred hcCCCCCCeEEEeCChHHhhhh-HHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcc
Confidence 4567889999999999999998 56788899999999875 578999999999999999999999999887754333334
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC------CCCCCCccccCCCcEEEEEeC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG------SRNIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~------~~~~~~~g~p~~~~~~~~~~~ 159 (236)
..++|.++.+|+++++++.+.|.+.++ .++++ .||+||++.++........ ......+|++.++++++++|
T Consensus 297 ~~~l~~~~~gG~~~~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~- 373 (576)
T PRK05620 297 RMSLQEIYVGGSAVPPILIKAWEERYG-VDVVH-VWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN- 373 (576)
T ss_pred cCceeEEEEcCCCCCHHHHHHHHHHhC-Cceee-eccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-
Confidence 568999999999999999999999886 78888 9999999876654322110 01123678899999999998
Q ss_pred CCCCCCC--CCCceEEEEecCccchhhcCCcccc----------------cccccCCCeEecCceEEEcCCCcEEEEccc
Q 026609 160 DTQKPLP--PNQLGEIWLRGPNMMRGYYNNEQAT----------------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRI 221 (236)
Q Consensus 160 ~~~~~~~--~g~~Gel~v~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~ 221 (236)
+ +++++ ++..|||+++++.++.+|+++++.+ ...+..++||+|||++++++||.+++.||.
T Consensus 374 ~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~ 452 (576)
T PRK05620 374 D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRA 452 (576)
T ss_pred C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEech
Confidence 3 66554 5788999999999999999998776 223445789999999999999999999999
Q ss_pred CCceeeccEEeecCC
Q 026609 222 KELIKYKGFQVTSNW 236 (236)
Q Consensus 222 ~d~i~~~G~~i~p~~ 236 (236)
||+|+++|++|+|.|
T Consensus 453 ~d~i~~~G~~i~~~e 467 (576)
T PRK05620 453 RDVIRSGGEWIYSAQ 467 (576)
T ss_pred hhhhhcCCEEEcHHH
Confidence 999999999999864
No 104
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-32 Score=234.21 Aligned_cols=222 Identities=25% Similarity=0.355 Sum_probs=186.9
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
.++..++|+++..+|++|..++ ...+.++..|+++++.. .+++..+++.++++++|.+.++|+++..|.+..+....+
T Consensus 214 ~~~~~~~d~~~~~~p~~h~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 292 (542)
T PRK06018 214 ALGTSAADTMLPVVPLFHANSW-GIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLK 292 (542)
T ss_pred hcCCCCCCEEEEecCHHHHhhh-HHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCC
Confidence 4567888999999999999998 45567889999998875 578999999999999999999999999998877666667
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC---------CCCCCCccccCCCcEEEE
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG---------SRNIGSAGALAPGVEALI 156 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~~~~~~ 156 (236)
++++|.++++|+++++++.++|++ ++ ..+++ .||+||++.++..+..... ......+|+|.+++++++
T Consensus 293 ~~~lr~~~~~G~~l~~~~~~~~~~-~~-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v 369 (542)
T PRK06018 293 LPHLKMVVCGGSAMPRSMIKAFED-MG-VEVRH-AWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKI 369 (542)
T ss_pred cccceEEEEcCCCCCHHHHHHHHH-hC-CCeEe-eecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEE
Confidence 889999999999999999999999 75 88999 9999999877654321110 011246899999999999
Q ss_pred EeCCCCCCCCCC--CceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeec
Q 026609 157 VSVDTQKPLPPN--QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 234 (236)
Q Consensus 157 ~~~~~~~~~~~g--~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p 234 (236)
+|+ ++++++.+ ..|||+++++.++.+|+++. ...++.++||+|||+++++++|.+++.||.||+|+++|++|+|
T Consensus 370 ~d~-~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~ 445 (542)
T PRK06018 370 TDD-AGKELPWDGKTFGRLKVRGPAVAAAYYRVD---GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISS 445 (542)
T ss_pred ECC-CCCCCCCCCCceeEEEEecCCcchhhhcCc---ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECH
Confidence 994 67777653 67999999999999999842 2334467999999999999999999999999999999999998
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 446 ~e 447 (542)
T PRK06018 446 ID 447 (542)
T ss_pred HH
Confidence 64
No 105
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.2e-32 Score=235.95 Aligned_cols=221 Identities=28% Similarity=0.429 Sum_probs=177.7
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCC
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 88 (236)
.....++++..+|++|..|+ ...+.++..|+++++.+.+++..+++.++++++|.+.++|+++..|.+.........++
T Consensus 223 ~~~~~~~~l~~~pl~h~~g~-~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 301 (579)
T PLN03102 223 EMGTCPVYLWTLPMFHCNGW-TFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSG 301 (579)
T ss_pred CCCCCCeEEecCChhhhcch-hHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCccc
Confidence 34566899999999999998 55677888899999888889999999999999999999999999998875434444567
Q ss_pred ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC------------CCCCCCccccCCCcEEEE
Q 026609 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG------------SRNIGSAGALAPGVEALI 156 (236)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~------------~~~~~~~g~p~~~~~~~~ 156 (236)
++.++++|+++++++.+++.+ ++ ..+++ .||+||++..+........ ....+..+.+.+ .+.+
T Consensus 302 ~~~~~~gg~~~~~~~~~~~~~-~g-~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i 376 (579)
T PLN03102 302 PVHVLTGGSPPPAALVKKVQR-LG-FQVMH-AYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDV 376 (579)
T ss_pred ceEEEECCCCCCHHHHHHHHH-cC-CeEEe-ecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEE
Confidence 888999999999999988865 55 78888 9999999865433211100 011222233333 4556
Q ss_pred EeCCCCCCCCC--CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeec
Q 026609 157 VSVDTQKPLPP--NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 234 (236)
Q Consensus 157 ~~~~~~~~~~~--g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p 234 (236)
++.+.+++++. ++.|||+++++.++.||+++++.+...| .+|||+|||++++|++|++++.||.+|+||++|++|+|
T Consensus 377 ~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p 455 (579)
T PLN03102 377 KNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISS 455 (579)
T ss_pred eccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECH
Confidence 66566777764 3679999999999999999999988887 67999999999999999999999999999999999998
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 456 ~e 457 (579)
T PLN03102 456 VE 457 (579)
T ss_pred HH
Confidence 65
No 106
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=7e-32 Score=234.10 Aligned_cols=225 Identities=27% Similarity=0.374 Sum_probs=182.9
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC-CC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK-FD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~ 85 (236)
.++..++|++++.+|++|.+++...++.+++.|+++++ +.+++..+++.++++++|++.++|+++..|.+...... ..
T Consensus 230 ~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 308 (567)
T PLN02479 230 IWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICL-RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILP 308 (567)
T ss_pred hcCCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEec-cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhccccc
Confidence 35567889999999999999986555556676766554 56899999999999999999999999999987654332 25
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccC---------CCCCCCCCCccccCCCcE-EE
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENS---------FAGSRNIGSAGALAPGVE-AL 155 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~---------~~~~~~~~~~g~p~~~~~-~~ 155 (236)
++++|.++++|+++++++.+.|.+. +..+++ .||+||++..+..+.. ..........|.+.++.. ++
T Consensus 309 ~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 385 (567)
T PLN02479 309 LPRVVHVMTAGAAPPPSVLFAMSEK--GFRVTH-TYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLD 385 (567)
T ss_pred ccceeEEEEcCCCCCHHHHHHHHhc--CCceec-ccccccccccccceeccccccccCcccccccccccCCCcCCcCcee
Confidence 7899999999999999999999876 478888 9999998654332210 000011134577778775 78
Q ss_pred EEeCCCCCCCCCC--CceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 156 IVSVDTQKPLPPN--QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 156 ~~~~~~~~~~~~g--~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
++|++++++++.+ +.|||+++++.++.+|+++++.+...+ .++||+|||+++++++|++++.||.||+||++|++|+
T Consensus 386 i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~ 464 (567)
T PLN02479 386 VVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENIS 464 (567)
T ss_pred EEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEc
Confidence 8886678888764 679999999999999999999998888 6889999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 465 ~~e 467 (567)
T PLN02479 465 SLE 467 (567)
T ss_pred HHH
Confidence 975
No 107
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=4.4e-32 Score=229.14 Aligned_cols=206 Identities=24% Similarity=0.305 Sum_probs=164.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
++..+ ++.++++|++|.+|+ ..++.+++.|+++++.+.............++++.++++|++++.+++.. ...++
T Consensus 156 ~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l~ 230 (452)
T PRK07445 156 FQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWLA 230 (452)
T ss_pred hcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhhh
Confidence 34443 467889999999999 67788999999999987432222233445788999999999999998732 33578
Q ss_pred CceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCC
Q 026609 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 167 (236)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~ 167 (236)
++|.++++|+++++++.+.+.+. +..+.+ .||+||++..+..............+|+|.++++++++ .
T Consensus 231 ~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~ 298 (452)
T PRK07445 231 QFRTILLGGAPAWPSLLEQARQL--QLRLAP-TYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------A 298 (452)
T ss_pred cceEEEECCccCCHHHHHHHHhc--CCeEec-CcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------C
Confidence 99999999999999999888764 478888 99999998655433222212234678999999999987 3
Q ss_pred CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 168 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 168 g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|+.|||+|+++.++.+|++++. ..++||+|||++++|+||++++.||+||+||++|+||+|.|
T Consensus 299 g~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~e 361 (452)
T PRK07445 299 NQTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAE 361 (452)
T ss_pred CCcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHH
Confidence 6779999999999999997532 25689999999999999999999999999999999999975
No 108
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.2e-31 Score=225.43 Aligned_cols=214 Identities=30% Similarity=0.454 Sum_probs=179.6
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...++.+++|++++.+|++|.+++ ..++.++..|+++++.+.+ ..+++.++++++|.+.++|+++..+.+.....
T Consensus 144 ~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-- 218 (436)
T TIGR01923 144 KENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEGGHN-- 218 (436)
T ss_pred HhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC--
Confidence 345678889999999999999999 6788999999999998765 38999999999999999999999998865422
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
+++|.++++|+++++++.+++.+. +..+.+ .||+||++..+............ .+|.|++++++++..++.
T Consensus 219 --~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~-~~G~~~~~~~~~i~~~~~--- 289 (436)
T TIGR01923 219 --ENLRKILLGGSAIPAPLIEEAQQY--GLPIYL-SYGMTETCSQVTTATPEMLHARP-DVGRPLAGREIKIKVDNK--- 289 (436)
T ss_pred --CceEEEEECCCCCCHHHHHHHHHh--CCceee-EecCCccchhccCcCcccccccc-CCCccCCCcEEEEEeCCC---
Confidence 689999999999999999988764 488888 99999998766654333222223 489999999999844222
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.|||+++++.++.+|+++++.+...+ .++||+|||++++++||++++.||.||++|++|++|+|.|
T Consensus 290 ---~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~~ 357 (436)
T TIGR01923 290 ---EGHGEIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPEE 357 (436)
T ss_pred ---CCceEEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHHH
Confidence 2779999999999999999776665544 6799999999999999999999999999999999999864
No 109
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-31 Score=233.75 Aligned_cols=223 Identities=22% Similarity=0.285 Sum_probs=177.8
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
.+.+++.++|++++.+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|.+.++|++++.++........
T Consensus 232 ~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~ 311 (600)
T PRK08279 232 GGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTD 311 (600)
T ss_pred HHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccc
Confidence 34467889999999999999999977888889999999999999999999999999999999999999999876554444
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCC----CcEEEEEeCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAP----GVEALIVSVD 160 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~----~~~~~~~~~~ 160 (236)
...++|.+ +|+.+++++++.|.+.++...+++ .||+||++...... ....+.+|.+.+ +..+...+.+
T Consensus 312 ~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~-~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~ 383 (600)
T PRK08279 312 RDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE-FYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVD 383 (600)
T ss_pred cCcceeEE--ecCCCCHHHHHHHHHHhCcceeee-eecccccceeeccc-----CCCCcccccccccccccceeeeeccC
Confidence 45567754 478899999999999998556787 99999987643321 223345565544 3333222211
Q ss_pred C--------C--CCCCCCCceEEE--EecCccchhhcCCcccccccc------cCCCeEecCceEEEcCCCcEEEEcccC
Q 026609 161 T--------Q--KPLPPNQLGEIW--LRGPNMMRGYYNNEQATKLTI------DKKGWVHTGDLGYFDGDGQLYVVDRIK 222 (236)
Q Consensus 161 ~--------~--~~~~~g~~Gel~--v~~~~~~~~~~~~~~~~~~~~------~~~~~~~TgD~~~~~~~g~~~~~GR~~ 222 (236)
. + .++++|+.||++ +.++.++.|| ++++.+...+ ..++||+|||+++++++|.+++.||.|
T Consensus 384 ~~~~i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~ 462 (600)
T PRK08279 384 TGEPVRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLG 462 (600)
T ss_pred cCceeeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccC
Confidence 2 2 357889999998 6789999999 7777766554 235799999999999999999999999
Q ss_pred CceeeccEEeecCC
Q 026609 223 ELIKYKGFQVTSNW 236 (236)
Q Consensus 223 d~i~~~G~~i~p~~ 236 (236)
|+||++|++|+|.|
T Consensus 463 d~ik~~G~~i~p~e 476 (600)
T PRK08279 463 DTFRWKGENVATTE 476 (600)
T ss_pred CeEEECCcccCHHH
Confidence 99999999999975
No 110
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-32 Score=233.93 Aligned_cols=222 Identities=23% Similarity=0.419 Sum_probs=175.0
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcCceEEEeChHHHHHHHhc-CC---cC
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILALAKH-GL---VK 82 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~---~~ 82 (236)
.+++++++++|++|..|+...++.+++.|+++++.++. ++..+++.+++++++.. .+|+.+..++.. .. ..
T Consensus 205 ~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~ 283 (578)
T PRK05850 205 PPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMA 283 (578)
T ss_pred CCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhc
Confidence 45789999999999999977899999999999998742 68899999999999854 567654444322 11 12
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCC-----CCceeeccccccccccccccccCCCCC------------------
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQVGYGLTETSGIATMENSFAGS------------------ 139 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~v~~~~YG~tE~g~~~~~~~~~~~~------------------ 139 (236)
..+++++|.++++|+++++++.++|.+.|+ ...+.+ .||+||++..+.........
T Consensus 284 ~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 362 (578)
T PRK05850 284 GLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRP-SYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRC 362 (578)
T ss_pred CcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccC-ccchhhhhhheeccCCCCCceEEEECHHHHhCCceEec
Confidence 345678999999999999999999998874 235677 99999987554432111000
Q ss_pred -----CCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCccccccccc-----------CCCeEec
Q 026609 140 -----RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-----------KKGWVHT 203 (236)
Q Consensus 140 -----~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~T 203 (236)
......|.|. +.+++++|++++++++.|+.|||+++|+.++.+|+++++.+...|. .++||+|
T Consensus 363 ~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~T 441 (578)
T PRK05850 363 ETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRT 441 (578)
T ss_pred CCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeec
Confidence 0001234443 5789999977789999999999999999999999999999887773 2579999
Q ss_pred CceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 204 GDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 204 gD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
||+++++ +|++++.||++|+||++|++|+|+|
T Consensus 442 GDl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~e 473 (578)
T PRK05850 442 GDLGFIS-EGELFIVGRIKDLLIVDGRNHYPDD 473 (578)
T ss_pred cceeeEE-CCEEEEEcccccEEEECCeecCHHH
Confidence 9999997 8999999999999999999999975
No 111
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.9e-31 Score=230.73 Aligned_cols=226 Identities=25% Similarity=0.417 Sum_probs=182.7
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC--
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL-- 80 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-- 80 (236)
.++..++|++++++|++|.+|+...++.++..|+++++.+. .++..+++.+.+++++.+...|..+..+.....
T Consensus 212 ~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~ 291 (579)
T PRK09192 212 GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK 291 (579)
T ss_pred cccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc
Confidence 57788899999999999999997778888999999977652 368899999999999877665544444433221
Q ss_pred -cCCCCCCCceEEeecCCCCCHHHHHHHHHhCCC-----CceeeccccccccccccccccCCCC----------------
Q 026609 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS-----ATVIQVGYGLTETSGIATMENSFAG---------------- 138 (236)
Q Consensus 81 -~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~-----~~v~~~~YG~tE~g~~~~~~~~~~~---------------- 138 (236)
....+++++|.++++|+++++++.+.|.+.++. ..+++ .||+||++..+........
T Consensus 292 ~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~-~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (579)
T PRK09192 292 DLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMP-SYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGK 370 (579)
T ss_pred cccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhccc-ccccccceeEEeccCCCCCceEEEEcHHHhcCCce
Confidence 123467899999999999999999999988642 24667 9999999765543221100
Q ss_pred ----------CCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEE
Q 026609 139 ----------SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGY 208 (236)
Q Consensus 139 ----------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~ 208 (236)
......+|+|.++++++++| +++++++.|+.|||+++|+.++.+|+++ +.+...+..++||+|||+++
T Consensus 371 ~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~ 448 (579)
T PRK09192 371 AVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGY 448 (579)
T ss_pred eeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceee
Confidence 00124689999999999999 5688999999999999999999999999 66777777789999999999
Q ss_pred EcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 209 FDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 209 ~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+ ++|+++++||+||+||++|++|+|.|
T Consensus 449 ~-~~G~l~~~GR~dd~i~~~G~~v~p~e 475 (579)
T PRK09192 449 L-LDGYLYITGRAKDLIIINGRNIWPQD 475 (579)
T ss_pred E-ECCEEEEEeccccEEEECCCccCHHH
Confidence 9 99999999999999999999999975
No 112
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=7.9e-31 Score=226.53 Aligned_cols=227 Identities=26% Similarity=0.421 Sum_probs=181.9
Q ss_pred eccCCCC-cEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcC--
Q 026609 7 ETAGELD-YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHG-- 79 (236)
Q Consensus 7 ~~~~~~~-d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-- 79 (236)
..+..++ |++++.+|++|.+|+...+..++..|+++++.++ .++..+++++++++++.+...|..+..+.+..
T Consensus 187 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 266 (545)
T PRK07768 187 AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRR 266 (545)
T ss_pred hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhc
Confidence 3455555 8999999999999997777888999999988764 26778899999999999877777766655432
Q ss_pred --CcCCCCCCCceEEeecCCCCCHHHHHHHHHh---CCC--CceeeccccccccccccccccCCC---------------
Q 026609 80 --LVKKFDLSSLKLVGSGAAPLGKELMEECAKN---VPS--ATVIQVGYGLTETSGIATMENSFA--------------- 137 (236)
Q Consensus 80 --~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~---~~~--~~v~~~~YG~tE~g~~~~~~~~~~--------------- 137 (236)
.....+++++|.++.+|+++++++.+++.+. ++. ..+++ .||+||++..++......
T Consensus 267 ~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~-~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (545)
T PRK07768 267 QAKPGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILP-AYGMAEATLAVSFSPCGAGLVVDEVDADLLAAL 345 (545)
T ss_pred cccccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccc-cccccccceEEEccCCCCCcceeeechhHhhcc
Confidence 1123567899999999999999999999874 431 24777 999999987654322110
Q ss_pred ---------CCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEE
Q 026609 138 ---------GSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGY 208 (236)
Q Consensus 138 ---------~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~ 208 (236)
.......+|+|.++++++++| ++++++++|+.|||+++++.++.+|++++.... ....++||+|||+++
T Consensus 346 ~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~-~~~~~g~~~TGDl~~ 423 (545)
T PRK07768 346 RRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGVGVIELRGESVTPGYLTMDGFIP-AQDADGWLDTGDLGY 423 (545)
T ss_pred CceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCCCEEEEEEccCcccccccCCCCCcc-cccCCCeeeccceEE
Confidence 011235789999999999999 678999999999999999999999997654433 334678999999999
Q ss_pred EcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 209 FDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 209 ~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++|.++++||.||+||++|++|+|.|
T Consensus 424 ~~~~g~l~~~GR~~d~i~~~G~~v~~~e 451 (545)
T PRK07768 424 LTEEGEVVVCGRVKDVIIMAGRNIYPTD 451 (545)
T ss_pred EecCCEEEEEccccceEEECCEecCHHH
Confidence 9999999999999999999999999875
No 113
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.97 E-value=3.1e-30 Score=222.85 Aligned_cols=224 Identities=26% Similarity=0.354 Sum_probs=177.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
.....+|++++.+|++|..++...++.++. |++.++...+++..+++.++++++|.+.++|+++..|++........+.
T Consensus 218 ~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 296 (545)
T PRK08162 218 WGMPKHPVYLWTLPMFHCNGWCFPWTVAAR-AGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGID 296 (545)
T ss_pred cCCCCCCeeEeccCcHhhhhHHHHHHHHHH-ccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCc
Confidence 456678899999999999998555554554 5555555678999999999999999999999999999887554444455
Q ss_pred CceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC---------CCCCCCccccCC-CcEEEEE
Q 026609 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG---------SRNIGSAGALAP-GVEALIV 157 (236)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~-~~~~~~~ 157 (236)
..+.++++|+.+++++.+.+.+. + ..+++ .||+||++..+..+..... .......|.+.+ ...++++
T Consensus 297 ~~~~~~~~g~~~~~~~~~~~~~~-~-~~~~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~ 373 (545)
T PRK08162 297 HPVHAMVAGAAPPAAVIAKMEEI-G-FDLTH-VYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVL 373 (545)
T ss_pred cceEEEECCCCCCHHHHHHHHHh-C-Cceee-cccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEE
Confidence 67778899999999999988765 4 88888 9999998654443211100 011234455544 3357788
Q ss_pred eCCCCCCCCC-C-CceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecC
Q 026609 158 SVDTQKPLPP-N-QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 158 ~~~~~~~~~~-g-~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
|++++++++. | +.|||+++++.++.+|+++++.+...| .++||+|||+++++++|.++++||.||++|++|++|+|.
T Consensus 374 d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~ 452 (545)
T PRK08162 374 DPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSI 452 (545)
T ss_pred cCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHH
Confidence 8778888876 3 469999999999999999999998887 678999999999999999999999999999999999986
Q ss_pred C
Q 026609 236 W 236 (236)
Q Consensus 236 ~ 236 (236)
|
T Consensus 453 e 453 (545)
T PRK08162 453 E 453 (545)
T ss_pred H
Confidence 4
No 114
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.97 E-value=7.5e-30 Score=219.63 Aligned_cols=218 Identities=22% Similarity=0.263 Sum_probs=180.3
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHH-HHhcCC-cCCCCC
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILA-LAKHGL-VKKFDL 86 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~-l~~~~~-~~~~~l 86 (236)
..+++++..+|++|.+++ ..++.+++.|+++++.+ .+++..+++.++++++|.+.++|+.+.. +.+... .....+
T Consensus 217 ~~~~~~~~~~pl~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~ 295 (533)
T PRK07798 217 GPGMRRFPAPPLMHGAGQ-WAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDL 295 (533)
T ss_pred CCCceEEEecchhhhhhH-HHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCC
Confidence 567899999999999999 57889999999999998 7899999999999999999999876543 333322 234567
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCc--cccCCCcEEEEEeCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSA--GALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~--g~p~~~~~~~~~~~~~~~~ 164 (236)
+++|.++++|+++++++.++|.+.+++..+++ .||+||++.+....... ..... +.+.++..++++| +++++
T Consensus 296 ~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~-~YG~tE~~~~~~~~~~~----~~~~~g~~~~~~~~~~~i~~-~~~~~ 369 (533)
T PRK07798 296 SSLFAIASGGALFSPSVKEALLELLPNVVLTD-SIGSSETGFGGSGTVAK----GAVHTGGPRFTIGPRTVVLD-EDGNP 369 (533)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHcCCCeEEe-eecccccccccccCCCC----CCccCCCCccCCCceEEEEC-CCCCC
Confidence 89999999999999999999999997688888 99999997665543211 11122 3788899999999 46779
Q ss_pred CCCCCc--eEEEEecCccchhhcCCcccccccccC---CCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQL--GEIWLRGPNMMRGYYNNEQATKLTIDK---KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~--Gel~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.|+. |+++. ++.++.+|+++++.+...|.. .+||+|||+++++++|++++.||.||+++.+|++|+|+|
T Consensus 370 ~~~g~~~~g~l~~-~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~e 445 (533)
T PRK07798 370 VEPGSGEIGWIAR-RGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEE 445 (533)
T ss_pred CCCCCCCeeEEEe-ecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHH
Confidence 999988 77765 557899999999888777632 359999999999999999999999999999999999875
No 115
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.97 E-value=3.1e-29 Score=209.76 Aligned_cols=194 Identities=20% Similarity=0.240 Sum_probs=165.8
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
+.+....+|+++..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|.+.++|+.+..|.+....
T Consensus 135 ~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~---- 210 (414)
T PRK08308 135 EALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPG---- 210 (414)
T ss_pred HhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----
Confidence 3456778899999999999999978899999999999999989999999999999999999999999999876432
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
..++|.++.+|+++++++.+.|++.. ..+++ .||+||++.+.... . ......+|+|++++++++.+.
T Consensus 211 ~~~l~~~~~~G~~l~~~~~~~~~~~~--~~~~~-~YG~tE~~~~~~~~--~--~~~~~~~G~p~~~~~~~~~~~------ 277 (414)
T PRK08308 211 TFQFHAVMTSGTPLPEAWFYKLRERT--TYMMQ-QYGCSEAGCVSICP--D--MKSHLDLGNPLPHVSVSAGSD------ 277 (414)
T ss_pred cccccEEEEccCCCCHHHHHHHHHhC--Chhhh-ccCccccCCeeecC--C--CCCCCccCccCCCeEEEEecC------
Confidence 13688999999999999999999873 57888 99999998654321 1 234567899999999988752
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.++.||+++++ .++||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 278 -~~~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~e 328 (414)
T PRK08308 278 -ENAPEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIE 328 (414)
T ss_pred -CCCCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHH
Confidence 35679999975 3579999999999999999999999999999999999975
No 116
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.97 E-value=2e-29 Score=213.54 Aligned_cols=201 Identities=29% Similarity=0.443 Sum_probs=168.4
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...++..++|+++..+|++|.+|+ ..++.++..|+++++.+. ..+++.+. +++.+..+|+++..++.....
T Consensus 168 ~~~~~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~--- 238 (458)
T PRK09029 168 LSLMPFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE--- 238 (458)
T ss_pred hhcCCCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc---
Confidence 345667888999999999999998 567788999999999774 55677774 789999999999999876542
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
..++|.+++||+++++.+.+.+.+. +..+++ .||+||++........ .....+|+|++++.+++++
T Consensus 239 -~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~-~YG~tE~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~------ 304 (458)
T PRK09029 239 -PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWC-GYGLTEMASTVCAKRA----DGLAGVGSPLPGREVKLVD------ 304 (458)
T ss_pred -CCcceEEEECCCCCCHHHHHHHHHc--CCcEec-cccccccCcceeccCC----CCCCCCCCCCCCCEEEEeC------
Confidence 3479999999999999999988765 488888 9999999875543221 1234589999999999986
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|||+++|+.++.+|+++++.+.... .++||+|||+++++ +|.+++.||+||+||++|++|+|.|
T Consensus 305 ------gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~e 368 (458)
T PRK09029 305 ------GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEE 368 (458)
T ss_pred ------CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHH
Confidence 8999999999999999887765443 67899999999998 9999999999999999999999975
No 117
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=5.2e-28 Score=198.75 Aligned_cols=193 Identities=27% Similarity=0.406 Sum_probs=160.9
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc---CCCCHHHHHHHHHhcC--ceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM---AKFDLEMFLRAIEKHR--VTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~---~~~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
..++++..+|++|.+|+ ..++.++..|+++++. +.+++..+++.+++++ .++...+|+.+..++.... ....+
T Consensus 73 ~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~ 150 (358)
T PRK07824 73 GPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAAL 150 (358)
T ss_pred CCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCc
Confidence 45788999999999999 5677888889988873 3578999999999998 5566778888877776543 23467
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+.+.+. +..+.+ .||+||++..+. ..|.|.+++++++.+
T Consensus 151 ~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~-~YG~TE~~~~~~------------~~G~~~~g~~v~i~~-------- 207 (358)
T PRK07824 151 AELDAVLVGGGPAPAPVLDAAAAA--GINVVR-TYGMSETSGGCV------------YDGVPLDGVRVRVED-------- 207 (358)
T ss_pred ccceEEEECCCCCCHHHHHHHHhc--CCcEEe-cccCCccCCCcC------------cCceeCCCCEEEecC--------
Confidence 899999999999999999988864 488888 999999875432 247899999998843
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|||+++|+.++.+|+++++.. .+..++||+|||++++ ++|.+++.||.||+||++|++|+|.|
T Consensus 208 ----Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~e 270 (358)
T PRK07824 208 ----GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQV 270 (358)
T ss_pred ----CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHH
Confidence 899999999999999887643 3445789999999999 89999999999999999999999975
No 118
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.96 E-value=4.4e-28 Score=203.24 Aligned_cols=211 Identities=18% Similarity=0.153 Sum_probs=162.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC--
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD-- 85 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-- 85 (236)
.+..++|++++..++.+..+.....+.++..|++++..+..++..+++.|++++++++.++|+++..|++.......+
T Consensus 114 ~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~ 193 (422)
T TIGR02155 114 AGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPA 193 (422)
T ss_pred cCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcc
Confidence 467889999988776654444344566788899998887777899999999999999999999999998765433322
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
..++|.++++||++++++.+.+.+.|+ +.+.+ .||+||++.......+.. ...+ ...+.+.+.++++|+++++++
T Consensus 194 ~~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~-~YG~tE~~~~~~~~~~~~--~~~g-~~~~~~~~~~eivd~~~g~~v 268 (422)
T TIGR02155 194 QTSLQVGIFGAEPWTNAMRKEIEARLG-MKATD-IYGLSEVIGPGVAMECVE--TQDG-LHIWEDHFYPEIIDPHTGEVL 268 (422)
T ss_pred cCceEEEEEeCCcCCHHHHHHHHHHhC-CceEe-cccchhhcCCceeecccc--cCCC-ceEecCeeEEEEECCCCCCCC
Confidence 358999999999999999999999997 88988 999999853211111110 1111 112234677889997789999
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCC-C-----cEEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD-G-----QLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~-g-----~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++|+.|||++++.. ...+ +.+||+|||+++++++ | .+++.||.||+|+++|.+|+|.|
T Consensus 269 ~~Ge~Gelvvt~~~------------~~~~-p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~e 332 (422)
T TIGR02155 269 PDGEEGELVFTTLT------------KEAL-PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQ 332 (422)
T ss_pred CCCCeeEEEEecCC------------cccc-ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHH
Confidence 99999999998742 1222 5679999999999775 4 36899999999999999999964
No 119
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.96 E-value=2.8e-28 Score=198.97 Aligned_cols=221 Identities=30% Similarity=0.417 Sum_probs=178.9
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC---CHH-HHH----HHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF---DLE-MFL----RAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~---~~~-~~~----~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
.+.+.|+++..+|+.|..-+.+. +.+++.|+++-..++. |.. .+. --+..+++|.+.++|..+.++.+.-.
T Consensus 275 ~lg~~D~yi~yLPLAHIlEl~aE-~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl 353 (678)
T KOG1180|consen 275 ELGPKDRYIAYLPLAHILELTAE-LVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVL 353 (678)
T ss_pred ccCCCceEEEechHHHHHHHHHH-HHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHH
Confidence 67788999999999999999665 5789999999887642 211 121 13467889999999988875533100
Q ss_pred ------------------------cC--C----------------CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceee
Q 026609 81 ------------------------VK--K----------------FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQ 118 (236)
Q Consensus 81 ------------------------~~--~----------------~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~ 118 (236)
.+ . ..--++|++++||++++++..+.+.-.+. +++..
T Consensus 354 ~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C-~Pv~q 432 (678)
T KOG1180|consen 354 SKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFC-CPVLQ 432 (678)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcc-ccccc
Confidence 00 0 00128999999999999999887777775 79999
Q ss_pred ccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCC--ceEEEEecCccchhhcCCccccccccc
Q 026609 119 VGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ--LGEIWLRGPNMMRGYYNNEQATKLTID 196 (236)
Q Consensus 119 ~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~--~Gel~v~~~~~~~~~~~~~~~~~~~~~ 196 (236)
.||.||++.-++..... +...+.+|.|++-++++++|-+++.=.+.+. +|||+|+|+.+..+|+++++.+...|.
T Consensus 433 -GYGLTEtca~~tv~e~~--d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft 509 (678)
T KOG1180|consen 433 -GYGLTETCAAATVLEPE--DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFT 509 (678)
T ss_pred -cccccchhcccEecChh--hcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhce
Confidence 99999988777665544 4455689999999999999977776666666 799999999999999999999999997
Q ss_pred C-CC--eEecCceEEEcCCCcEEEEcccCCceee-ccEEeec
Q 026609 197 K-KG--WVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTS 234 (236)
Q Consensus 197 ~-~~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p 234 (236)
. +| ||+|||+|.+.+||++.++.|++|++|+ +|+.|+-
T Consensus 510 ~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL 551 (678)
T KOG1180|consen 510 VEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISL 551 (678)
T ss_pred ecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeeh
Confidence 7 78 9999999999999999999999999999 8998863
No 120
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=99.95 E-value=1e-26 Score=190.34 Aligned_cols=228 Identities=22% Similarity=0.235 Sum_probs=182.5
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
+.++.+++|++..++|+||++|.+..+.+++..|+|+++..+|++.++|+-+.++++|++...-.+.+.|++++......
T Consensus 276 ~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er 355 (649)
T KOG1179|consen 276 YVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEER 355 (649)
T ss_pred HHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999988765555
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccc-cCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATME-NSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~-~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
-..+|..+ |.-+.+++++.|.++|+..+|.+ .||+||...-.... ....+....+...+-+..+++.-+|++++++
T Consensus 356 ~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE-~YgaTEgn~~~~N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~ 432 (649)
T KOG1179|consen 356 QHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGE-FYGATEGNSNLVNYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEP 432 (649)
T ss_pred CceEEEEe--cCCCCchHHHHHHHHcCCCeEEE-EeccccCcceeeeecCccccccchhhhhhhccceEEEEecCCCCce
Confidence 55666665 78899999999999999777888 99999986544332 1111222222233334445555566667764
Q ss_pred ----------CCCCCceEEE--EecCcc---chhhcCCcccccccc------cCCCeEecCceEEEcCCCcEEEEcccCC
Q 026609 165 ----------LPPNQLGEIW--LRGPNM---MRGYYNNEQATKLTI------DKKGWVHTGDLGYFDGDGQLYVVDRIKE 223 (236)
Q Consensus 165 ----------~~~g~~Gel~--v~~~~~---~~~~~~~~~~~~~~~------~~~~~~~TgD~~~~~~~g~~~~~GR~~d 223 (236)
|++|++|.++ |..... +.||.++.+.+.... ..|-||.|||+-..|+.|.++|..|+.|
T Consensus 433 iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGD 512 (649)
T KOG1179|consen 433 IRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGD 512 (649)
T ss_pred eecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCC
Confidence 6789999775 344444 889998666665443 2344999999999999999999999999
Q ss_pred ceeeccEEeecCC
Q 026609 224 LIKYKGFQVTSNW 236 (236)
Q Consensus 224 ~i~~~G~~i~p~~ 236 (236)
.+...|+||+.+|
T Consensus 513 TFRWKGENVsTtE 525 (649)
T KOG1179|consen 513 TFRWKGENVSTTE 525 (649)
T ss_pred ceeecCCcccHHH
Confidence 9999999999876
No 121
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.92 E-value=1.1e-23 Score=173.83 Aligned_cols=175 Identities=20% Similarity=0.213 Sum_probs=137.3
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceEE
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLV 92 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i 92 (236)
.|++++.+|++|.+|+...++.++..|+++++.+++++..+++.++.. ++++++|++++.|.+.. ..++++|.
T Consensus 138 ~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~- 210 (386)
T TIGR02372 138 VRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG- 210 (386)
T ss_pred CCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-
Confidence 368999999999999877888899999999998888988888888754 78899999999997653 34667776
Q ss_pred eecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceE
Q 026609 93 GSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 172 (236)
Q Consensus 93 ~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Ge 172 (236)
+++|+++++++++.+.+. +...+.+ .||+||++.++.... +...++|+|++++.+ + ++..
T Consensus 211 i~gGa~l~~~l~~~~~~~-g~~~v~~-~YG~TEt~~i~~~~~-------~~~~~~~~p~~~~~~-~--~~~~-------- 270 (386)
T TIGR02372 211 VSSGAPSTAATWRCLLAA-GLARLLE-VYGATETGGIGLREA-------PDDPFRLLPDLACFA-D--TLSS-------- 270 (386)
T ss_pred EecCCCCCHHHHHHHHHh-cccchhh-eeccccccccccccC-------CCCCcccCCCccccC-C--CccC--------
Confidence 678999999999999886 3246777 999999987655321 123456777766532 1 1110
Q ss_pred EEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 173 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 173 l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.+ ...|++|||+++++++|++++.||+||+||++|+||+|.|
T Consensus 271 ---~g-------------------~~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~e 312 (386)
T TIGR02372 271 ---AG-------------------LARRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGH 312 (386)
T ss_pred ---CC-------------------ccceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHH
Confidence 01 1125899999999999999999999999999999999975
No 122
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.91 E-value=2.8e-23 Score=174.97 Aligned_cols=208 Identities=18% Similarity=0.060 Sum_probs=153.7
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC--C
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF--D 85 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--~ 85 (236)
.+..++|+++.+.|+.+..+.....++++..|++++.... ....++.+++++++.+.++|+.+..|.+....... .
T Consensus 125 ~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~ 202 (445)
T TIGR03335 125 QGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPA 202 (445)
T ss_pred cCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcc
Confidence 3778899999999988877764555677888988765443 34568999999999999999988888765433322 2
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
..++|.++++||++++++.+.+.+.|+ +.+++ .||+||++. +..+.. . .....+-+.+.++++|++++.++
T Consensus 203 ~~~lr~ii~gGE~l~~~~r~~ie~~~g-~~v~~-~YG~TE~~~-~~~c~~-----~-~g~h~~~d~~~vEIvDp~~~~~v 273 (445)
T TIGR03335 203 ESSIRRLVVGGESFADESRNYVEELWG-CEVYN-TYGSTEGTM-CGECQA-----V-AGLHVPEDLVHLDVYDPRHQRFL 273 (445)
T ss_pred cCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEe-cCChhhhhh-eEEecC-----C-CCccccCCceEEEEEcCCCCCCC
Confidence 368999999999999999999999997 88999 999999863 222211 1 11233445678999998888999
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEc-CCCc--------EEEEcccCCceeeccEEeecC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFD-GDGQ--------LYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~-~~g~--------~~~~GR~~d~i~~~G~~i~p~ 235 (236)
++|+.|||++++-.... .... ++--.|+|||+++.. ++.+ +...||.||+++++|.+|+|+
T Consensus 274 p~Ge~GELvvT~L~~~~--------~r~~-~PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~ 343 (445)
T TIGR03335 274 PDGECGRIVLTTLLKPG--------ERCG-SLLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRV 343 (445)
T ss_pred cCCCceEEEEEecCCCC--------ccCC-ceEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHH
Confidence 99999999998743210 0000 022259999999863 2211 445699999999999999985
No 123
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.91 E-value=2.1e-23 Score=183.61 Aligned_cols=228 Identities=22% Similarity=0.255 Sum_probs=188.8
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
...+....+|+++...++...... ..++.++..|+++++.+. .++..+.+.++++++|.+..+|+.+..++.....
T Consensus 399 ~~~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~ 477 (642)
T COG1020 399 GARFGLDADDRVLALASLSFDASV-FEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALA 477 (642)
T ss_pred HHhcCCCcccEEeecCCcccchhH-HHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhh
Confidence 345778888999999999888777 789999999999999874 5789999999999999999999999999876322
Q ss_pred C--CCCCCCceEEeecCCCCCHHHHHHHHHhCC-CCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEe
Q 026609 82 K--KFDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 82 ~--~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 158 (236)
. ....+.+|.++.+|+.++.++.+.+....+ ...+.+ .||+||+..................+|+|.++..+.++|
T Consensus 478 ~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~-~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild 556 (642)
T COG1020 478 PDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLN-LYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD 556 (642)
T ss_pred ccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEee-ccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC
Confidence 2 222335999999999999999998888754 245555 999999655444322221111145789999999999999
Q ss_pred CCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecC
Q 026609 159 VDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 159 ~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
+..+++|.|..||+++.|.++..+|+++++.+...|..+.+|+|||+++...+|.+.++||.|+++|++|++|...
T Consensus 557 -~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~ 632 (642)
T COG1020 557 -QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELG 632 (642)
T ss_pred -CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcH
Confidence 7899999999999999999999999999999998884444899999999999999999999999999999999554
No 124
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.88 E-value=2.4e-21 Score=157.72 Aligned_cols=208 Identities=20% Similarity=0.152 Sum_probs=161.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC--CC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK--FD 85 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~ 85 (236)
.+...+|++..+.-..--.|-.....++-..|++++...+-+.+..+++++.+++|++.++|+.+..|.+..++.. ..
T Consensus 129 ~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~ 208 (438)
T COG1541 129 AGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPD 208 (438)
T ss_pred ccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChh
Confidence 3566677777666633222222445566678888887777788999999999999999999999999998876653 33
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
-.++|.+++|+|+++++..+.+.+.|+ +.+++ .||+||..+..+. .|.. . .....+.+...++++||++++++
T Consensus 209 ~~~lk~~i~gaE~~see~R~~ie~~~g-~~~~d-iYGltE~~g~g~~-eC~~--~--~glhi~eD~~~~Ei~dP~t~e~l 281 (438)
T COG1541 209 KLSLKKGIFGAEPWSEEMRKVIENRFG-CKAFD-IYGLTEGFGPGAG-ECTE--R--NGLHIWEDHFIFEIVDPETGEQL 281 (438)
T ss_pred hcceeEEEEecccCCHHHHHHHHHHhC-Cceee-ccccccccCCccc-cccc--c--cCCCcchhhceeeeecCCcCccC
Confidence 458999999999999999999999998 88888 9999999777522 2211 1 13344567888999999999999
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCc---------EEEEcccCCceeeccEEeecC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQ---------LYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~---------~~~~GR~~d~i~~~G~~i~p~ 235 (236)
++|+.|||+++.-+ +.. .+--.|+|||+....++.+ ..+.||.||++++.|.+|+|.
T Consensus 282 ~dge~GelV~T~L~-------~~~------~PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~ 347 (438)
T COG1541 282 PDGERGELVITTLT-------KEG------MPLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPS 347 (438)
T ss_pred CCCCeeEEEEEecc-------ccC------cceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHH
Confidence 99999999998632 111 1233599999999866322 678999999999999999985
No 125
>PTZ00297 pantothenate kinase; Provisional
Probab=99.67 E-value=1.1e-15 Score=142.08 Aligned_cols=187 Identities=16% Similarity=0.105 Sum_probs=132.9
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC-----
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF----- 84 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~----- 84 (236)
..++|++++.+|++|+++. ...+.+++.|+++.. +++..+++.++++++|+++++|.+++.+......+..
T Consensus 642 ~~~~D~~Ls~LPLaHI~er-~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~ 717 (1452)
T PTZ00297 642 SFKKHLMVHFTPFAMLFNR-VFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAV 717 (1452)
T ss_pred CCCCCEEEEechHHHHHHH-HHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHH
Confidence 4567999999999999996 566788999999874 4789999999999999999999999866443110000
Q ss_pred -------------------CC------------------CCceEEeecCC--CCCHHHHHHHHHhCCCCceeeccccccc
Q 026609 85 -------------------DL------------------SSLKLVGSGAA--PLGKELMEECAKNVPSATVIQVGYGLTE 125 (236)
Q Consensus 85 -------------------~l------------------~~lr~i~~~G~--~~~~~~~~~~~~~~~~~~v~~~~YG~tE 125 (236)
.. .++|.+++||. +++..+.. ...+.. .||.||
T Consensus 718 ~~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~-------~i~i~~-g~glTE 789 (1452)
T PTZ00297 718 YSWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE-------HISVCY-VPCLRE 789 (1452)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC-------CceEEE-ecceEE
Confidence 00 26788888763 45433322 256777 899999
Q ss_pred cccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCc
Q 026609 126 TSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGD 205 (236)
Q Consensus 126 ~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD 205 (236)
... ..... .. ...|.|+|++++++.+.+...- .+..|||++++ +++++.|... .+||+
T Consensus 790 ~~~---~~~~~--~~--~~~G~PlpgvEvKI~~~~E~~~--~~~~GEIlvr~-------~kdpe~T~e~--~~gW~---- 847 (1452)
T PTZ00297 790 VFF---LPSEG--VF--CVDGTPAPSLQVDLEPFDEPSD--GAGIGQLVLAK-------KGEPRRTLPI--AAQWK---- 847 (1452)
T ss_pred eee---ecCCC--Cc--ccCCeecCceEEEEcccccccC--CCCCCeEEEEE-------CCChHHHHHh--hCcCc----
Confidence 431 11211 11 2239999999999987322111 12469999964 4677777653 24553
Q ss_pred eEEEcCCCcEEEEcccCCceee-ccEEeecC
Q 026609 206 LGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 235 (236)
Q Consensus 206 ~~~~~~~g~~~~~GR~~d~i~~-~G~~i~p~ 235 (236)
+||++.|+||++|+||+ +|++|.|+
T Consensus 848 -----~dG~L~IidRkKdlikls~GEyVaP~ 873 (1452)
T PTZ00297 848 -----RDRTLRLLGPPLGILLPVAYEYVIAA 873 (1452)
T ss_pred -----cCCeEEEEeccccceECCCCcEEcHH
Confidence 68999999999999999 89999996
No 126
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.55 E-value=4e-14 Score=117.83 Aligned_cols=154 Identities=16% Similarity=0.064 Sum_probs=106.9
Q ss_pred CHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccccccc
Q 026609 49 DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSG 128 (236)
Q Consensus 49 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~ 128 (236)
+.+.+++.|++++++++.+.|+.+..|++..++.... ..+|.++++||.++++..+.+.+.|+ +++.+ .||+|| |.
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~-~YG~tE-g~ 250 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQ-IYQATE-GF 250 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeE-ccCCch-hh
Confidence 5778999999999999999999999998875544433 47899999999999999999999998 88999 999999 65
Q ss_pred ccccccCCCCCCCCCCccccCCCcEEE--EEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCce
Q 026609 129 IATMENSFAGSRNIGSAGALAPGVEAL--IVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDL 206 (236)
Q Consensus 129 ~~~~~~~~~~~~~~~~~g~p~~~~~~~--~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~ 206 (236)
++..|.. +....--..+.++ ++|+ .++ ++.+|++-. +. . ++--.|+|||+
T Consensus 251 la~eC~~-------g~lHl~ed~~~vE~~ivD~-~~~-------~~~ViT~L~------n~-~------~PlIRYrtGD~ 302 (430)
T TIGR02304 251 LASTCRC-------GTLHLNEDLVHIEKQYLDE-HKR-------FVPIITDFT------RT-T------QPIVRYRLNDI 302 (430)
T ss_pred eEEecCC-------CCEEEccccEEEEeeEECC-CCc-------eEEEEecCC------Cc-c------ceEEeeeCCCE
Confidence 5544321 1111112233444 7874 333 334665421 11 1 12225999999
Q ss_pred EEEcCCC----c----E-EEEcccCCceee---ccE--Eeec
Q 026609 207 GYFDGDG----Q----L-YVVDRIKELIKY---KGF--QVTS 234 (236)
Q Consensus 207 ~~~~~~g----~----~-~~~GR~~d~i~~---~G~--~i~p 234 (236)
+...++. . + .+.||.||++++ +|. +|+|
T Consensus 303 ~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p 344 (430)
T TIGR02304 303 LVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFP 344 (430)
T ss_pred EEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCH
Confidence 8875442 2 4 388999999985 444 4466
No 127
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.14 E-value=7.1e-10 Score=98.23 Aligned_cols=229 Identities=17% Similarity=0.206 Sum_probs=158.3
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
+.+.+.+..-++..++++...|+....+...+.|...++.++ -++..++..++++++.-++.+-..++.+.+..+.
T Consensus 977 e~~~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t 1056 (1363)
T KOG3628|consen 977 ETCQLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLET 1056 (1363)
T ss_pred HHHccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhcccc
Confidence 346677888888888888888998889999999999888775 3688999999999999988777778888776543
Q ss_pred CCCCCCCc------eEEeecCCCCCHHHHHHHHHhCCC-----Cceeecccccccccccccccc-------------CCC
Q 026609 82 KKFDLSSL------KLVGSGAAPLGKELMEECAKNVPS-----ATVIQVGYGLTETSGIATMEN-------------SFA 137 (236)
Q Consensus 82 ~~~~l~~l------r~i~~~G~~~~~~~~~~~~~~~~~-----~~v~~~~YG~tE~g~~~~~~~-------------~~~ 137 (236)
+..+++.. ..++..-++....+.+.|.+.|.. ..+.- .|++.-.-.++.... ...
T Consensus 1057 ~~enl~~~gnn~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avSt-sys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR 1135 (1363)
T KOG3628|consen 1057 SVENLSKRGNNTSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVST-SYSSRVNPFICLRSYSGPEPTTVYLDARALR 1135 (1363)
T ss_pred ccchhhhhhcccccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcc-cccccCChHhhhccccCCCCcceeechhhhh
Confidence 33333311 334445667778888888876631 11222 343332222222200 000
Q ss_pred ------------CCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCccccc-ccc---------
Q 026609 138 ------------GSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATK-LTI--------- 195 (236)
Q Consensus 138 ------------~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~-~~~--------- 195 (236)
........|...+++++.+++||+..+|.+|+.||+|+.+.+-+.+|+.-..... +.|
T Consensus 1136 ~grV~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~ 1215 (1363)
T KOG3628|consen 1136 EGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDL 1215 (1363)
T ss_pred ccceeeeecCCCCccccccCCcccccceeEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhcccccc
Confidence 0001123577889999999999999999999999999999888877665322111 111
Q ss_pred cCCCeEecCceEEEc------CC----CcEEEEcccCCceeeccEEeecC
Q 026609 196 DKKGWVHTGDLGYFD------GD----GQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 196 ~~~~~~~TgD~~~~~------~~----g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
....|-||||+|+.. .. .-++++|-.++.+-++|.+-+|.
T Consensus 1216 ~~~sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~ 1265 (1363)
T KOG3628|consen 1216 LGKSYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPS 1265 (1363)
T ss_pred ccccceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcc
Confidence 133599999999863 11 23999999999999999998875
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.03 E-value=2.8e-09 Score=95.95 Aligned_cols=227 Identities=15% Similarity=0.043 Sum_probs=127.5
Q ss_pred eeeccCCCCcEEEEecCh-hhHHhHHHHHHHHhhcCcEEEEcCCC---CHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 5 DQETAGELDYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMAKF---DLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
...+-.+.++++-..... ++..-. ......+++|+.+..+... .+.++.+.+++++++..+.+|++.++++....
T Consensus 229 ~~~f~~t~s~~~~~~~~~~~~d~i~-~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~ 307 (1032)
T KOG1178|consen 229 FTTFPPTGSDRFTFKTSVYFDDTIQ-KFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILT 307 (1032)
T ss_pred cccCCcCccchhhhhheeecccchH-HHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcC
Confidence 334445555554222222 222222 3334455666655554432 37899999999999999999999887766542
Q ss_pred c-------------CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC--CCCCCCc
Q 026609 81 V-------------KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG--SRNIGSA 145 (236)
Q Consensus 81 ~-------------~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~--~~~~~~~ 145 (236)
. .....+.+|....+||+....+...+.+.+...-... -|++++............. ......+
T Consensus 308 ~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~-~y~s~~~~~~~s~~~~~~s~~ll~~~~v 386 (1032)
T KOG1178|consen 308 TSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGL-PYLSTDPTGLVSYDDFSPSKVLLTNENV 386 (1032)
T ss_pred cchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhhcccceeeee-cccCCCCccceeHHhhCcccceecceeE
Confidence 2 1112238999999999999999887777665233333 6888887666554221110 0011111
Q ss_pred cccCCC-------cEEEEEeCCCCCCCCCCCceEEEEe----cCccchhhcCCcccccccc-----cCCCeEecCceEEE
Q 026609 146 GALAPG-------VEALIVSVDTQKPLPPNQLGEIWLR----GPNMMRGYYNNEQATKLTI-----DKKGWVHTGDLGYF 209 (236)
Q Consensus 146 g~p~~~-------~~~~~~~~~~~~~~~~g~~Gel~v~----~~~~~~~~~~~~~~~~~~~-----~~~~~~~TgD~~~~ 209 (236)
..+... ..+.... ..+.+.+.++.+..... +.-...+ +..++.....+ ..+..|+|||.++.
T Consensus 387 ~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~g-~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~ 464 (1032)
T KOG1178|consen 387 YSVPKFDSIIGSLTVLESLY-RAGGEGEGGVGKGCLGAEQNLSSWVVDG-YSTPENFLPNFLTVDGVKARIYRTGDNGRS 464 (1032)
T ss_pred EeccchhhccCCCcceeeee-ccCcccCCcccceeecccccccceeecc-ccchhhcCCcccccccchhhccccccccee
Confidence 111111 1122222 23333333322221111 1111222 11222211111 23458999999999
Q ss_pred cCCCcEEEEcccCCceeeccEEeecC
Q 026609 210 DGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 210 ~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
.+.|.+.++||.|+.||++|.++.-.
T Consensus 465 l~ng~l~~~GR~d~qIK~rG~Ri~L~ 490 (1032)
T KOG1178|consen 465 LKNGGLEISGRADRQIKDRGVRIELG 490 (1032)
T ss_pred ecCCCEEEEEeccceEEEccEEEehh
Confidence 89999999999999999999998643
No 129
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.76 E-value=7.9e-07 Score=72.94 Aligned_cols=164 Identities=23% Similarity=0.297 Sum_probs=105.9
Q ss_pred HhhcCcEEEEcC-CCCHHHHHHHH----HhcCceEEEeChHHHHHHHhcCCcCCC--CCC-CceEEeecC------CCCC
Q 026609 35 QLQKGSCIILMA-KFDLEMFLRAI----EKHRVTHIWVVPPLILALAKHGLVKKF--DLS-SLKLVGSGA------APLG 100 (236)
Q Consensus 35 ~l~~G~~~~~~~-~~~~~~~~~~i----~~~~~t~~~~~P~~~~~l~~~~~~~~~--~l~-~lr~i~~~G------~~~~ 100 (236)
....++...+-. .++.+.+.+.+ .+.++..+++.|.++..++...++... .|+ ..+.+..|| +.++
T Consensus 161 ~~~~~~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~ 240 (365)
T PF04443_consen 161 ELFFGSRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVS 240 (365)
T ss_pred hcccCceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccC
Confidence 344556644422 36666665555 456678899999988777665544433 333 455565554 5575
Q ss_pred -HHHHHHHHHhCCC---CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEe
Q 026609 101 -KELMEECAKNVPS---ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLR 176 (236)
Q Consensus 101 -~~~~~~~~~~~~~---~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~ 176 (236)
.+..+.+.+.|+- ..+.+ .||+||.......+.. +... ..++ +.+.|+++.++++.|+.|-|.+-
T Consensus 241 r~ef~~~l~~~~Gv~~~~~i~~-~ygmtEl~s~~~~~~~-------~~~~-~p~w--V~iRDp~tl~~~~~Ge~Gli~vi 309 (365)
T PF04443_consen 241 REEFYARLQEVFGVIPIENIYD-MYGMTELNSQAYECGH-------GHFH-VPPW--VIIRDPETLEPLPPGETGLIQVI 309 (365)
T ss_pred HHHHHHHHHHHHCCCCHHHeee-eeeccccchhheeCCC-------Cccc-CCCe--EEEECCCCCcCCCCCCeeEEEEE
Confidence 5677778888873 46778 9999998766554311 1111 1233 66679989999999999999886
Q ss_pred cCccchhhcCCcccccccccCCCeEecCceEEEcCC--------CcEEEEcccCC
Q 026609 177 GPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD--------GQLYVVDRIKE 223 (236)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~--------g~~~~~GR~~d 223 (236)
.+...+ .-+...|.|+|.+..+ .++.++||.+.
T Consensus 310 dl~~~s--------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 310 DLANTS--------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred cccccC--------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 543210 1233779999987543 26999999873
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.73 E-value=8.9e-08 Score=85.39 Aligned_cols=224 Identities=19% Similarity=0.170 Sum_probs=148.1
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcC--
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHG-- 79 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-- 79 (236)
++.+.....++++..+......|++..++.+++.|.|.+..|+ ..+..+.+.+-+++.+++..=-.-+++.....
T Consensus 302 ~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~ 381 (1363)
T KOG3628|consen 302 AHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQE 381 (1363)
T ss_pred hhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccC
Confidence 3445667778999999999999999999999999999999986 67889999999999998764433333322211
Q ss_pred ---------CcCCCCCCCceEEeecCCCCCHHHHHHHHHhC----CCCceeeccc-----------------cccccccc
Q 026609 80 ---------LVKKFDLSSLKLVGSGAAPLGKELMEECAKNV----PSATVIQVGY-----------------GLTETSGI 129 (236)
Q Consensus 80 ---------~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~----~~~~v~~~~Y-----------------G~tE~g~~ 129 (236)
+....+++++|.++..-..++++..+-..+.| +...+-. .| +.+|.+..
T Consensus 382 ~p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~-~~~p~l~ll~hGgi~is~k~~~~~~~~ 460 (1363)
T KOG3628|consen 382 DPKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKV-VDFPILCLLWHGGIPISFKDWMEIGTV 460 (1363)
T ss_pred CcccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcce-eechhhhhhhcCceEEEeccchhhhcc
Confidence 12334788999999999999888655444333 2111111 22 22444433
Q ss_pred cccccCCCCCC----------------------------CCCCccccCC-CcEEEEEeCCCCCCCCCCCceEEEEecCcc
Q 026609 130 ATMENSFAGSR----------------------------NIGSAGALAP-GVEALIVSVDTQKPLPPNQLGEIWLRGPNM 180 (236)
Q Consensus 130 ~~~~~~~~~~~----------------------------~~~~~g~p~~-~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~ 180 (236)
....+...... ....++.-.+ .+.+.++++++.+.|..++.|||||.++.+
T Consensus 461 ~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~ 540 (1363)
T KOG3628|consen 461 SIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSL 540 (1363)
T ss_pred cccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCc
Confidence 33211100000 0112333223 466778888899999999999999999999
Q ss_pred chhhcCCccccccccc------------CCCeEecCceEEEcCCCcEEEEcccCCceeecc
Q 026609 181 MRGYYNNEQATKLTID------------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKG 229 (236)
Q Consensus 181 ~~~~~~~~~~~~~~~~------------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G 229 (236)
...|+.-+..+...|. ...+.|||=+|++.+++-+++.++.|......|
T Consensus 541 ~~~~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~ 601 (1363)
T KOG3628|consen 541 GKLFYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSG 601 (1363)
T ss_pred ccceeeccccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhh
Confidence 9999987666665551 123899999999965555555555555444444
No 131
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=98.60 E-value=8.4e-08 Score=73.90 Aligned_cols=57 Identities=19% Similarity=0.169 Sum_probs=53.2
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCce
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVT 63 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t 63 (236)
+..+++++|+++ .+|++|.+|+...++.+++.|+++++.++|++..+++.++++++|
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 346788999999 999999999988899999999999999999999999999999986
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.19 E-value=1.4e-06 Score=71.56 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=30.8
Q ss_pred CCCeEecCceEEE-cCCCcEEEEcccCCceeecc---EEeecC
Q 026609 197 KKGWVHTGDLGYF-DGDGQLYVVDRIKELIKYKG---FQVTSN 235 (236)
Q Consensus 197 ~~~~~~TgD~~~~-~~~g~~~~~GR~~d~i~~~G---~~i~p~ 235 (236)
.+|||+|||+|++ |++|+++|.||.+ +| +||+|+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~ 244 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA 244 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH
Confidence 6899999999998 7999999999998 78 788884
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.06 E-value=2.5e-05 Score=67.54 Aligned_cols=126 Identities=19% Similarity=0.189 Sum_probs=70.6
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCC----
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT---- 161 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~---- 161 (236)
.|.++.+..-+..-...-.+.+++.+|+..+....|++||+ .+..... .......-.|-.+ -++.++.++
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~----~~~~~~~l~~~~~-ffEFip~~~~~~~ 339 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLD----PEDPGYVLAPDSG-FFEFIPVDEDEQN 339 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-----CCC--EEE-TTSS-EEEEEE-STT---
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecC----CCCCceEeecCCe-EEEEEeccCCccc
Confidence 67899544444333345556778888877777779999996 3333221 1112222223333 455555433
Q ss_pred ----CC-----CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEc--CCC--cEEEEcccCCceeec
Q 026609 162 ----QK-----PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFD--GDG--QLYVVDRIKELIKYK 228 (236)
Q Consensus 162 ----~~-----~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~--~~g--~~~~~GR~~d~i~~~ 228 (236)
.+ .+..|+..||+|++.+ |.| .|+.||+++.. .++ .+.|+||.+.++++.
T Consensus 340 ~~~~~~~l~~~ele~G~~YelviTt~~---GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~ 402 (528)
T PF03321_consen 340 PSEQPKTLLLHELEVGEEYELVITTNS---GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLF 402 (528)
T ss_dssp ----SSSEEGGG--TT-EEEEEEESTT---S-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEEE-SS
T ss_pred ccCCCceecHHHhcCCCeEEEEEeccc---cee--------------eeecCCEEEEeeccCCCcEEEEeccCCceeecc
Confidence 22 2557889999998742 122 39999999873 223 799999999999999
Q ss_pred cEEeec
Q 026609 229 GFQVTS 234 (236)
Q Consensus 229 G~~i~p 234 (236)
|+|++.
T Consensus 403 gEkl~e 408 (528)
T PF03321_consen 403 GEKLSE 408 (528)
T ss_dssp S--EEH
T ss_pred eeecCH
Confidence 999875
No 134
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.97 E-value=9.7e-05 Score=64.08 Aligned_cols=131 Identities=15% Similarity=0.048 Sum_probs=80.3
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCc-cccCCC---cEEEEEeC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSA-GALAPG---VEALIVSV 159 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~-g~p~~~---~~~~~~~~ 159 (236)
.-.|.+|+|-..-..-...-...++..+++..+....|++||+-. .....+. .++... ....|+ .++.-++.
T Consensus 301 rLWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~-ginl~P~---~~p~~~sy~L~p~~~yFEFip~~~ 376 (612)
T PLN02620 301 RLWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYF-GVNLNPL---CKPSEVSYTLIPTMAYFEFLPVHR 376 (612)
T ss_pred HhCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEE-EeccCCC---CCcccceeeecCCcEEEEEeeccC
Confidence 356788876654444555666777777888888888999999643 3321111 111111 111222 22322221
Q ss_pred CC-----------------CCC-----CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEE----cCCC
Q 026609 160 DT-----------------QKP-----LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF----DGDG 213 (236)
Q Consensus 160 ~~-----------------~~~-----~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~----~~~g 213 (236)
++ +++ +..|+..||+|++-+ |.+ .|+.||+.+. +...
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---GLy--------------RYrlGDvv~V~Gf~n~~P 439 (612)
T PLN02620 377 NNGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---GLY--------------RYRVGDVLRVAGFKNKAP 439 (612)
T ss_pred cccccccccccccccccccCccccHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCCCc
Confidence 11 111 457888999997632 111 3899999876 4557
Q ss_pred cEEEEcccCCceeeccEEeecC
Q 026609 214 QLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 214 ~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
.+.|++|.+-+..+.|+|+..+
T Consensus 440 ~~~Fv~R~~~~lsi~gEK~tE~ 461 (612)
T PLN02620 440 QFSFICRKNVVLSIDSDKTDEV 461 (612)
T ss_pred eEEEEeecCceeecccccCCHH
Confidence 8999999999999999998643
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.83 E-value=0.00017 Score=62.66 Aligned_cols=131 Identities=11% Similarity=0.068 Sum_probs=80.4
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCC-ccccCCC-cEEEEEeCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGS-AGALAPG-VEALIVSVDT 161 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~-~g~p~~~-~~~~~~~~~~ 161 (236)
.-.|.+|+|-..-......-...++..+++..++...|++||+-. .....+. .++.. .....|+ .-++.++.++
T Consensus 290 rLWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~-ginl~p~---~~p~~~sy~L~p~~~yFEFip~~~ 365 (606)
T PLN02247 290 RLWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYF-GINLKPL---SDPSDVSYTLLPNMAYFEFLPVDK 365 (606)
T ss_pred HhCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEE-EeccCcC---CCccCCceeecCCcEEEEEeecCC
Confidence 356788886664444456666778778888888888999999643 2221111 11111 1112222 1223332112
Q ss_pred CC-----------------------------CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEE---
Q 026609 162 QK-----------------------------PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF--- 209 (236)
Q Consensus 162 ~~-----------------------------~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~--- 209 (236)
++ .+..|+..||+|++-+ |.+ .|+.||+.+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---GLY--------------RYrlGDvv~V~GF 428 (606)
T PLN02247 366 NNGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---GLY--------------RYRVGDILMVTGF 428 (606)
T ss_pred CcccccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeee
Confidence 11 2457888899987621 111 4899999775
Q ss_pred -cCCCcEEEEcccCCceeeccEEeecC
Q 026609 210 -DGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 210 -~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
+...++.|++|.+.+..+.|+|+..+
T Consensus 429 ~n~~P~~~Fv~R~~~vlsi~gEK~tE~ 455 (606)
T PLN02247 429 YNNAPQFRFVQRRNVVLSIDTDKTNEE 455 (606)
T ss_pred cCCCceEEEEecCCceeecccccCCHH
Confidence 45578999999999999999998643
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.76 E-value=0.00064 Score=59.47 Aligned_cols=128 Identities=11% Similarity=0.054 Sum_probs=76.5
Q ss_pred CCCC---ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCC-
Q 026609 85 DLSS---LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD- 160 (236)
Q Consensus 85 ~l~~---lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~- 160 (236)
-.|. +..++.||-. .-...++..+|+..++...|++||+.. +....+..........--| .+.-++.++.+
T Consensus 300 lWPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~-gi~~~~~~~p~~~~~~l~~-~~~ffEFiP~~~ 374 (597)
T PLN02249 300 IWPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYF-GINLNPMCKPSEVSYTIMP-NMAYFEFLPHNH 374 (597)
T ss_pred hCCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEE-EeecCCCCCCCCcceEecC-CcEEEEeeeccc
Confidence 3566 5556666543 555667777776666666999999643 3221111001111111112 25555555321
Q ss_pred CC-------CC-----CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEc----CCCcEEEEcccCCc
Q 026609 161 TQ-------KP-----LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFD----GDGQLYVVDRIKEL 224 (236)
Q Consensus 161 ~~-------~~-----~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~----~~g~~~~~GR~~d~ 224 (236)
.+ .. +..|+..||+|++-+ |.| .|+.||..+.. .--++.|+||.+.+
T Consensus 375 ~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~---GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ 437 (597)
T PLN02249 375 DGDGALDETSLVELADVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFKFIRRKNVL 437 (597)
T ss_pred CCcccCCCCcEecHHHcCCCCeEEEEEEccc---cee--------------EeecCCEEEEeeccCCCcEEEEEccCCcc
Confidence 11 12 457888999997632 111 39999999874 24579999999999
Q ss_pred eeeccEEeec
Q 026609 225 IKYKGFQVTS 234 (236)
Q Consensus 225 i~~~G~~i~p 234 (236)
+++.|+|+..
T Consensus 438 ls~~GEKl~e 447 (597)
T PLN02249 438 LSIESDKTDE 447 (597)
T ss_pred eecccccCCH
Confidence 9999999864
No 137
>PLN02736 long-chain acyl-CoA synthetase
Probab=82.08 E-value=14 Score=33.32 Aligned_cols=82 Identities=9% Similarity=-0.005 Sum_probs=61.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.|+.++|++...++-..-.. ..+++++..|+.++... .+.++++...+++.+++.++..+..+..+..... .+
T Consensus 98 ~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~----~~ 171 (651)
T PLN02736 98 HGIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS----EI 171 (651)
T ss_pred hCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh----cC
Confidence 57889999988888666543 36678899999998764 5789999999999999999998877666544321 23
Q ss_pred CCceEEeec
Q 026609 87 SSLKLVGSG 95 (236)
Q Consensus 87 ~~lr~i~~~ 95 (236)
+.++.++..
T Consensus 172 ~~l~~ii~~ 180 (651)
T PLN02736 172 PSVRLIVVV 180 (651)
T ss_pred CCceEEEEE
Confidence 456665543
No 138
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=78.93 E-value=20 Score=32.70 Aligned_cols=84 Identities=10% Similarity=0.035 Sum_probs=61.9
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
..++.++|++...++-..-.- ...++++..|+..+... .+.++.+...+++.++..++..+..+..+.+... .
T Consensus 125 ~lG~~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~----~ 198 (696)
T PLN02387 125 ALGHNKEERVAIFADTRAEWL--IALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISS----Q 198 (696)
T ss_pred HhCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh----c
Confidence 357889998888887555433 46678899999999765 6789999999999999999988877776654321 3
Q ss_pred CCCceEEeecC
Q 026609 86 LSSLKLVGSGA 96 (236)
Q Consensus 86 l~~lr~i~~~G 96 (236)
++.++.++.-+
T Consensus 199 ~~~l~~ii~~~ 209 (696)
T PLN02387 199 LETVKRVIYMD 209 (696)
T ss_pred cCCceEEEEEC
Confidence 34566665544
No 139
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=78.14 E-value=28 Score=30.21 Aligned_cols=88 Identities=14% Similarity=0.044 Sum_probs=62.8
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH-----HHHHHhc--
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL-----ILALAKH-- 78 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~-----~~~l~~~-- 78 (236)
.+|++++|++..+.|-+..--+ ..+++-..|..++... .+....+-=.+++.++..++..|.+ ++.|++.
T Consensus 96 ~lGL~kGDrVgvwgpN~~~w~l--~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icP 173 (596)
T KOG1177|consen 96 SLGLKKGDRVGVWGPNSYEWVL--CQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICP 173 (596)
T ss_pred hhcCCCCCEEEEecCChHHHHH--HHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhH
Confidence 4789999999999987765444 4456667777777764 4667777778899999999988854 3344432
Q ss_pred -------CCcCCCCCCCceEEeecC
Q 026609 79 -------GLVKKFDLSSLKLVGSGA 96 (236)
Q Consensus 79 -------~~~~~~~l~~lr~i~~~G 96 (236)
...+...++.++.+++.+
T Consensus 174 Ev~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 174 EVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred HhhcCCCccccccccccceEEEecC
Confidence 122445678999998887
No 140
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=75.13 E-value=13 Score=27.98 Aligned_cols=88 Identities=11% Similarity=0.120 Sum_probs=53.8
Q ss_pred cEEEEecCh--hhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeChHH------HHHHHhcCCcCCC
Q 026609 14 YVFLCVLPL--FHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKF 84 (236)
Q Consensus 14 d~~l~~~p~--~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~~ 84 (236)
.+++..++. .|..|........-..|-.++.. +..+++.+.+.+++.+++.+..+-+. +..+.+..++..
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~- 163 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG- 163 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC-
Confidence 355555555 68888844433334667777754 46789999999999999997665322 233333322221
Q ss_pred CCCCceEEeecCCCCCHHH
Q 026609 85 DLSSLKLVGSGAAPLGKEL 103 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~ 103 (236)
..+.+ .++.||.++.++.
T Consensus 164 ~~~~v-~i~vGG~~~~~~~ 181 (197)
T TIGR02370 164 YRDSV-KFMVGGAPVTQDW 181 (197)
T ss_pred CCCCC-EEEEEChhcCHHH
Confidence 11223 3778898887654
No 141
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=73.96 E-value=41 Score=31.10 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=56.5
Q ss_pred cEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceEE
Q 026609 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLV 92 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i 92 (236)
|++..+++-..- +....++++..|++.+... .+.++++...+++-++.+++..+..+..+.... ..++.++.+
T Consensus 131 d~V~i~~~N~~e--w~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~i 204 (746)
T PTZ00342 131 KLLGLYGSNSIN--WLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKL 204 (746)
T ss_pred cEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEE
Confidence 777777774433 2246678899999988864 688999999999999999998777776665432 134667776
Q ss_pred eecC
Q 026609 93 GSGA 96 (236)
Q Consensus 93 ~~~G 96 (236)
+.-+
T Consensus 205 i~~~ 208 (746)
T PTZ00342 205 IILD 208 (746)
T ss_pred EEEC
Confidence 6654
No 142
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.45 E-value=40 Score=28.98 Aligned_cols=68 Identities=9% Similarity=-0.051 Sum_probs=53.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAK 77 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 77 (236)
.++++++++...+|-....- ..+++++..|+..+..+ ......+...++..++..++........+.+
T Consensus 51 ~g~~~~~~V~l~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~ 119 (521)
T PRK06187 51 LGVKKGDRVAVFDWNSHEYL--EAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAA 119 (521)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHH
Confidence 46778898888888766433 47789999999999876 4678899999999999999888776655543
No 143
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=73.09 E-value=39 Score=29.03 Aligned_cols=66 Identities=8% Similarity=0.082 Sum_probs=52.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.+..++|++...+|-....- ..+++++..|+..++.+ ......+.+.+++.++..++..+.....+
T Consensus 50 ~gv~~g~~V~l~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 116 (513)
T PRK07656 50 LGIGKGDRVAIWAPNSPHWV--IAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVD 116 (513)
T ss_pred cCCCCCCEEEEECCCChHHH--HHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHH
Confidence 46778888888887665433 46779999999999876 46788999999999999998887765544
No 144
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=72.79 E-value=21 Score=25.10 Aligned_cols=47 Identities=19% Similarity=0.220 Sum_probs=34.9
Q ss_pred hhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 23 FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 23 ~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.|..|........-..|-.++... ..+++++.+.+.+++++.+..+-
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 477777444444446777777765 57799999999999999977654
No 145
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=71.90 E-value=28 Score=30.67 Aligned_cols=65 Identities=15% Similarity=0.150 Sum_probs=52.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
.++.++|++...++-....- ..+++++..|+..+..+ .+.+.++...+++.+++.++..+..+..
T Consensus 93 ~gv~~gd~V~i~~~n~~~~~--~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 158 (570)
T PRK04319 93 LGVEKGDRVFIFMPRIPELY--FALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLER 158 (570)
T ss_pred hCCCCCCEEEEECCCCHHHH--HHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhc
Confidence 46788899888888655433 46789999999998765 5788999999999999999988876543
No 146
>PRK07788 acyl-CoA synthetase; Validated
Probab=71.15 E-value=31 Score=30.15 Aligned_cols=66 Identities=11% Similarity=0.002 Sum_probs=51.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-.-. +...+++++..|+..+..+ ....+++...+++.++..++..+.....+
T Consensus 94 ~gi~~gd~V~i~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 94 LGVRAGDGVAVLARNHRG--FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLL 160 (549)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHH
Confidence 467888988888765543 3357789999999999886 47789999999999999998877655444
No 147
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=70.87 E-value=18 Score=32.65 Aligned_cols=60 Identities=8% Similarity=-0.040 Sum_probs=50.7
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.|+.++|++...+|..--.-. .++++...|+..+... .+.++.+...+++.+++.++...
T Consensus 112 ~Gv~~GDrV~i~~~n~~e~~~--~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 112 LNISKNDNVLIYMANTLEPLI--AMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred cCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcc
Confidence 588999999999998776555 6778999999988765 68899999999999999988754
No 148
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=70.71 E-value=19 Score=30.08 Aligned_cols=59 Identities=10% Similarity=0.039 Sum_probs=46.8
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEe
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV 67 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 67 (236)
..+++++|++...+|-... +...+++++..|+..++.+ ....+.+...+++.++++++.
T Consensus 40 ~~g~~~~~~V~i~~~n~~~--~~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 40 KLGVKKGDRVAILLPNSIE--FVVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp HTTSSTTSEEEEEESSSHH--HHHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEE
T ss_pred HhCCCccccccccCCccce--eeeeecccccccccccccccccccccccccccccceeEEEE
Confidence 3577888888877776533 3357789999999999986 578899999999999999996
No 149
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=70.23 E-value=50 Score=29.90 Aligned_cols=83 Identities=10% Similarity=-0.061 Sum_probs=58.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++.++|++...++-..-.. ...++++..|++.+... .+.++++...++..+++.++.....+..+++... ...
T Consensus 96 ~Gv~~gd~V~i~~~n~~ew~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~---~~~ 170 (660)
T PLN02430 96 SGAEPGSRVGIYGSNCPQWI--VAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDC---KSA 170 (660)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhc---ccC
Confidence 47888999888888665533 46778999999988765 5788999999999999999987765544443211 123
Q ss_pred CCceEEeec
Q 026609 87 SSLKLVGSG 95 (236)
Q Consensus 87 ~~lr~i~~~ 95 (236)
+.++.++..
T Consensus 171 ~~l~~ii~~ 179 (660)
T PLN02430 171 KRLKAIVSF 179 (660)
T ss_pred CCceEEEEE
Confidence 456665544
No 150
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=69.78 E-value=24 Score=29.18 Aligned_cols=66 Identities=14% Similarity=0.069 Sum_probs=52.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...+|-... +...+++++..|+.+++.+ ....+.+...+++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~--~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE--LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 467888999888887754 3357789999999999876 56788899999999999998887655443
No 151
>PRK06839 acyl-CoA synthetase; Validated
Probab=69.44 E-value=29 Score=29.67 Aligned_cols=66 Identities=5% Similarity=-0.058 Sum_probs=52.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-... +...+++++..|+..+..+ ..+...+...+++.+++.++..+.....+
T Consensus 48 ~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 48 LNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 567888988888877655 3357789999999999876 46788899999999999998887665443
No 152
>PLN02654 acetate-CoA ligase
Probab=68.35 E-value=22 Score=32.17 Aligned_cols=61 Identities=10% Similarity=0.103 Sum_probs=50.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.+++++|++...+|-.--.- ..+++++..|+..+... .+..+.+...++..++..++....
T Consensus 140 ~Gv~~GdrV~i~~pn~~e~v--~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 140 VGVKKGDAVVIYLPMLMELP--IAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 57889999999998766544 46789999999988875 688999999999999999887553
No 153
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=67.25 E-value=36 Score=29.30 Aligned_cols=65 Identities=8% Similarity=-0.086 Sum_probs=50.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
.+..++|++...++-....-. .+++++..|+..+..+ ....+.+...+++.+++.++..+..+..
T Consensus 45 ~g~~~~~~V~i~~~n~~~~~~--~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 110 (515)
T TIGR03098 45 LGLARGERVAIYLDKRLETVT--AMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDL 110 (515)
T ss_pred cCCCCCCEEEEEcCCCHHHHH--HHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhh
Confidence 456778888888877665444 6789999999988776 5778999999999999998877655443
No 154
>PRK08316 acyl-CoA synthetase; Validated
Probab=67.13 E-value=37 Score=29.25 Aligned_cols=66 Identities=8% Similarity=-0.000 Sum_probs=51.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...+|-....- ..+++++..|+..+..+ ......+...+++.++..++..+.....+
T Consensus 56 ~gi~~~~~V~l~~~~~~~~~--~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~ 122 (523)
T PRK08316 56 LGLKKGDRVAALGHNSDAYA--LLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTA 122 (523)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHH
Confidence 36788888888887766533 46789999999988876 46788899999999999998877665544
No 155
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=66.82 E-value=45 Score=29.18 Aligned_cols=67 Identities=10% Similarity=-0.031 Sum_probs=53.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 76 (236)
.++.+++++...+|-....- ..+++++..|+..+..+ .....++...+++.+++.++..+.....+.
T Consensus 66 ~gi~~g~~V~v~~~n~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~ 133 (542)
T PRK06155 66 AGVKRGDRVALMCGNRIEFL--DVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALE 133 (542)
T ss_pred cCCCCCCEEEEECCCChHHH--HHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHH
Confidence 46788898888888776653 46789999999999875 578899999999999999988876655543
No 156
>PLN03102 acyl-activating enzyme; Provisional
Probab=66.66 E-value=40 Score=29.83 Aligned_cols=63 Identities=8% Similarity=0.058 Sum_probs=50.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++.-.+|-.- .+...+++++..|++++..+ ..+.+++...++..+++.++..+...
T Consensus 59 ~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (579)
T PLN03102 59 LNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE 122 (579)
T ss_pred cCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH
Confidence 46888999988888544 33356789999999988875 57899999999999999998766544
No 157
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=66.16 E-value=51 Score=28.45 Aligned_cols=64 Identities=8% Similarity=-0.033 Sum_probs=51.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
.++.++|++....+-....-. .+++++..|+..+..+ ....+.+...+++.+++.++..+....
T Consensus 57 ~g~~~~~~v~i~~~n~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 57 LGIRKGDKVALHLDNCPEFIF--CWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred cCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhH
Confidence 577888999888877665443 6678999999988775 578899999999999999988776443
No 158
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=65.37 E-value=26 Score=31.58 Aligned_cols=60 Identities=10% Similarity=-0.010 Sum_probs=49.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-..-.-. .+++++..|+..+... .+..+.+...+++.++..++...
T Consensus 134 ~Gv~~GdrV~i~~~n~~e~~~--~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 134 LGVRPGDRVSGYLPNIPQAVV--AMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred cCCCCCCEEEEEcCCCHHHHH--HHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 578999999999998766444 6778999999988875 57899999999999999988654
No 159
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=64.55 E-value=29 Score=31.05 Aligned_cols=60 Identities=10% Similarity=-0.019 Sum_probs=49.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.|+.++|++...+|-.--.- ..+++++..|+..+... .+....+...+++.++..++...
T Consensus 103 ~Gv~~Gd~V~i~~~n~~e~v--~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 103 LGVGRGDRVLIYMPMIAEAV--FAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECC
Confidence 58899999999998775543 46789999999988765 57889999999999999888654
No 160
>PLN02574 4-coumarate--CoA ligase-like
Probab=64.37 E-value=42 Score=29.48 Aligned_cols=66 Identities=20% Similarity=0.163 Sum_probs=51.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-... +...+++++..|+..+..+ .....++...+++.++..++..+.....+
T Consensus 87 ~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 87 MGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred hCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 678889999988885543 3356789999999999876 46788899999999999888777655444
No 161
>PLN02614 long-chain acyl-CoA synthetase
Probab=64.17 E-value=47 Score=30.15 Aligned_cols=66 Identities=9% Similarity=-0.094 Sum_probs=52.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.|+.++|++...++-..-.- ...++++..|+..+... .+.++++...+++.++..++.....+..+
T Consensus 99 ~Gv~~Gd~Vai~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~ 165 (666)
T PLN02614 99 VGVKDEAKCGIYGANSPEWI--ISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISEL 165 (666)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHH
Confidence 57889999988888665533 46789999999998875 57889999999999999998877655444
No 162
>PRK13383 acyl-CoA synthetase; Provisional
Probab=63.97 E-value=42 Score=29.05 Aligned_cols=66 Identities=8% Similarity=0.036 Sum_probs=51.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-.-.. ...+++++..|+..+..+ .+..+.+...+++.++..++..+.....+
T Consensus 80 ~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 146 (516)
T PRK13383 80 DGVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERI 146 (516)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHH
Confidence 3678889888888744432 246778999999999876 57889999999999999998877655443
No 163
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=63.69 E-value=30 Score=31.17 Aligned_cols=60 Identities=12% Similarity=-0.012 Sum_probs=48.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-....- ..+++++..|+..+... .+..+.+...++..++..++..+
T Consensus 134 ~Gv~~gd~V~i~~~n~~e~v--~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 134 LGVGPGDRVAAYLPNIPETV--VAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEcc
Confidence 47888999999998665543 46789999999988875 57889999999999999888754
No 164
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=63.51 E-value=29 Score=31.02 Aligned_cols=61 Identities=8% Similarity=0.039 Sum_probs=49.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...+|-...+- ..+++++..|+..+... .+.++.+...++..++..++..+.
T Consensus 108 ~Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 108 LGVKKGDRVAIYMPMIPEAA--IAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 57889999999998665543 46789999999988765 688999999999999999887653
No 165
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=63.47 E-value=51 Score=28.97 Aligned_cols=66 Identities=14% Similarity=0.049 Sum_probs=52.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...+|-....- ..+++++..|+..+..+ ....+.+...+++.++..++..+.....+
T Consensus 77 ~gi~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 143 (573)
T PRK05605 77 LGVRPGDRVAIVLPNCPQHI--VAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTV 143 (573)
T ss_pred hCCCCCCEEEEECCCCHHHH--HHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHH
Confidence 46788898888887665533 46789999999999875 57899999999999999998877654433
No 166
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=63.45 E-value=50 Score=28.79 Aligned_cols=65 Identities=8% Similarity=-0.036 Sum_probs=51.6
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
++.++|++...++-.. .+...+++++..|+..+..+ .....++...+++.+++.++..+.....+
T Consensus 57 g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 122 (546)
T PRK08314 57 GVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKV 122 (546)
T ss_pred CCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhH
Confidence 7888999888888554 33357889999999999875 56788999999999999988877655443
No 167
>PRK09274 peptide synthase; Provisional
Probab=63.27 E-value=32 Score=30.09 Aligned_cols=60 Identities=8% Similarity=0.108 Sum_probs=47.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-....- ..+++++..|+..+..+ ....+++...+++.++..++..+
T Consensus 61 ~g~~~gd~V~~~~~n~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 61 AGIGRGMRAVLMVTPSLEFF--ALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred cCCCCCCEEEEEeCCcHHHH--HHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEecc
Confidence 46788999998888655433 46789999999998875 46788899999999999887654
No 168
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=63.21 E-value=39 Score=29.89 Aligned_cols=68 Identities=9% Similarity=0.058 Sum_probs=56.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHHh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAK 77 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 77 (236)
++++++|++...+|-...+.. ..++++..|+.+.... .++...+...++.-++..++.....+..+..
T Consensus 67 ~~i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~ 135 (537)
T KOG1176|consen 67 LGIKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISE 135 (537)
T ss_pred CCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHH
Confidence 357889999999998877666 5678899999988875 5889999999999999999987766665543
No 169
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=63.00 E-value=97 Score=26.47 Aligned_cols=91 Identities=12% Similarity=0.001 Sum_probs=56.8
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeCh----HHHHHHHhcCCc
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVP----PLILALAKHGLV 81 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P----~~~~~l~~~~~~ 81 (236)
..|+.++|.++.-+|-.--+.. .+|..+..|..-|+. +.....++-...+...++.+...- ..++.+.+...
T Consensus 72 ~lGi~~Gd~vlvQLpN~~ef~~--~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~- 148 (542)
T COG1021 72 RLGIKPGDTVLVQLPNVAEFYI--TFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELV- 148 (542)
T ss_pred hcCCCCCCEEEEECCchHHHHH--HHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHH-
Confidence 4689999999888886554443 667777888887775 334455555555555555443221 22344444322
Q ss_pred CCCCCCCceEEeecCCCCCHH
Q 026609 82 KKFDLSSLKLVGSGAAPLGKE 102 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~ 102 (236)
...+++|.++..||.=.+.
T Consensus 149 --a~~~tlr~v~v~ge~~~~~ 167 (542)
T COG1021 149 --AKHPTLRHVIVAGEAEHPS 167 (542)
T ss_pred --hhCCcceEEEEccCCCCcc
Confidence 2347899999999886443
No 170
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=62.71 E-value=31 Score=30.23 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=49.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
+...++|++...+|-...+- ..+++++..|+..+..+ ....+++...++..+++.++........+
T Consensus 62 L~~~~gd~Val~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 128 (539)
T PRK06334 62 VSKYPDQHIGIMMPASAGAY--IAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHL 128 (539)
T ss_pred HhhccCCeEEEEcCCchHHH--HHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHH
Confidence 33347888888888665533 46789999999998876 46788999999999999888776554433
No 171
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=62.51 E-value=52 Score=29.75 Aligned_cols=66 Identities=8% Similarity=-0.084 Sum_probs=52.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.|+.++|++...++-..-.- ...++++..|+..+... .+..+++...+++.+++.++........+
T Consensus 97 ~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~ 163 (660)
T PLN02861 97 RGVNPGDRCGIYGSNCPEWI--IAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSI 163 (660)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHH
Confidence 57889999988888665433 46789999999988875 57889999999999999998876655444
No 172
>PLN03052 acetate--CoA ligase; Provisional
Probab=62.42 E-value=34 Score=31.44 Aligned_cols=61 Identities=11% Similarity=0.096 Sum_probs=50.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...+|..--+- ..+++++..|+..+..+ .+.++.+...+++.++..++....
T Consensus 228 ~Gv~~GdrVai~~pn~~e~v--ia~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 228 LGFEKGDAIAIDMPMNVHAV--IIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred cCCCCCCEEEEEeCCCHHHH--HHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 57899999999999765544 46788999999988875 688999999999999999887654
No 173
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=62.37 E-value=49 Score=28.99 Aligned_cols=65 Identities=11% Similarity=0.106 Sum_probs=50.6
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
..++.++|++..++|-....- ..+++++..|+..+..+ .+...++...+++.+++.++.......
T Consensus 70 ~~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~ 135 (560)
T PRK08751 70 ELQLKKGDRVALMMPNCLQYP--IATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGT 135 (560)
T ss_pred HhCCCCCCEEEEECCCCHHHH--HHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHH
Confidence 357888998888887665433 46788999999999765 577889999999999999887665443
No 174
>PLN02246 4-coumarate--CoA ligase
Probab=61.89 E-value=43 Score=29.20 Aligned_cols=64 Identities=9% Similarity=0.051 Sum_probs=49.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
.++.++|++...++-.. .+...+++++..|++.+..+ .....++...++..++..++.......
T Consensus 70 ~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 134 (537)
T PLN02246 70 LGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVD 134 (537)
T ss_pred hCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHH
Confidence 56788898888876653 33356788999999999876 567889999999999998877655443
No 175
>PRK07514 malonyl-CoA synthase; Validated
Probab=61.67 E-value=59 Score=27.89 Aligned_cols=65 Identities=8% Similarity=-0.024 Sum_probs=50.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
.++.++|++...++-... +...+++++..|+..+..+ ......+...++..+++.++..+.....
T Consensus 48 ~g~~~gd~v~i~~~~~~e--~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~ 113 (504)
T PRK07514 48 LGVKPGDRVAVQVEKSPE--ALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAW 113 (504)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHH
Confidence 467888988888886643 3356789999999998876 4678889999999999998887765543
No 176
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=61.40 E-value=34 Score=30.59 Aligned_cols=60 Identities=10% Similarity=0.051 Sum_probs=49.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-.--.-. .+++++..|+..+... .+....+...+++.++..++...
T Consensus 104 ~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 104 LGVQRGDRVLIYMPMIAEAAF--AMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred cCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 578899999999987665444 6789999999988765 57889999999999999888654
No 177
>PRK08162 acyl-CoA synthetase; Validated
Probab=61.03 E-value=52 Score=28.67 Aligned_cols=66 Identities=9% Similarity=0.034 Sum_probs=52.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...+|-....- ..+++++..|+..+..+ .....++...+++.+++.++..+.....+
T Consensus 63 ~g~~~g~~v~i~~~~~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 129 (545)
T PRK08162 63 RGIGRGDTVAVLLPNIPAMV--EAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVA 129 (545)
T ss_pred hCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHH
Confidence 46788899988888765433 46789999999888875 57889999999999999998877655443
No 178
>PRK05857 acyl-CoA synthetase; Validated
Probab=58.96 E-value=44 Score=29.19 Aligned_cols=61 Identities=10% Similarity=-0.023 Sum_probs=49.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...++-....-. .+++++..|+..+..+ .+..+++...++..++..++..+.
T Consensus 61 ~g~~~g~~V~i~~~~~~e~~~--~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~ 122 (540)
T PRK05857 61 QSVSRGSRVLVISDNGPETYL--SVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPG 122 (540)
T ss_pred hCcCCCCEEEEEcCCCHHHHH--HHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEecc
Confidence 467888999888877666444 6789999999999876 477889999999998888887664
No 179
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=58.88 E-value=67 Score=28.52 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=50.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
.++.++|++...++-.... ...+++++..|+..+..+ ....+.+...+++.++..++........
T Consensus 82 ~g~~~gd~V~i~~~n~~~~--v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 147 (600)
T PRK08279 82 RGVGKGDVVALLMENRPEY--LAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEA 147 (600)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHH
Confidence 4678889988888766553 357789999999988875 4678889999999999998877655443
No 180
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=57.81 E-value=45 Score=29.89 Aligned_cols=60 Identities=8% Similarity=0.021 Sum_probs=49.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-....-. .+++++..|+..+... .+....+...++..++..++...
T Consensus 118 ~Gv~~gd~V~i~~~n~~e~~~--~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 118 LGVKKGDRVAIYMPMIPEAAV--AMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred cCCCCCCEEEEEcCCCHHHHH--HHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 577889999988887666444 6779999999998875 57899999999999999988654
No 181
>PRK07798 acyl-CoA synthetase; Validated
Probab=57.55 E-value=78 Score=27.32 Aligned_cols=66 Identities=2% Similarity=-0.131 Sum_probs=49.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-... +...+++++..|+..+..+ ....+++...+++.++..++..+.....+
T Consensus 48 ~g~~~~~~v~v~~~n~~~--~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 114 (533)
T PRK07798 48 QGLGPGDHVGIYARNRIE--YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRV 114 (533)
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHH
Confidence 467788888877765443 3356788899999999876 46788999999999999988776544433
No 182
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.21 E-value=67 Score=28.22 Aligned_cols=62 Identities=10% Similarity=0.116 Sum_probs=49.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
.++.++|++...+|-..-.- ..+++++..|+..+..+ .+...++...+++.++..++.....
T Consensus 70 ~gi~~gd~Vai~~~n~~~~~--~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 132 (562)
T PRK05677 70 TDLKPGDRIAVQLPNVLQYP--VAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANM 132 (562)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecch
Confidence 46788899988888765543 46789999999999876 5678899999999999998876544
No 183
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=56.34 E-value=52 Score=29.04 Aligned_cols=66 Identities=11% Similarity=-0.058 Sum_probs=51.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.+..++|++...++-..-.- ..+++++..|+..+..+ ......+...++..++..++..+.....+
T Consensus 59 ~g~~~gd~V~~~~~n~~e~~--~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 59 LGITGDQRVGSMMYNCAEHL--EVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred cCCCCCCEEEEEeCCCHHHH--HHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 56778898888887655433 46788899999888875 56788999999999999998877655443
No 184
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=56.26 E-value=52 Score=28.96 Aligned_cols=60 Identities=8% Similarity=-0.094 Sum_probs=48.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-....-. .+++++..|+..+..+ ....+++...+++.+++.++..+
T Consensus 52 ~Gv~~gd~V~v~~~n~~~~~~--~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~ 112 (563)
T PLN02860 52 LGLRNGDVVAIAALNSDLYLE--WLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDE 112 (563)
T ss_pred hCCCCCCEEEEEcCCCHHHHH--HHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEec
Confidence 478899999988886655443 6678899999999876 57789999999999999888755
No 185
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=56.13 E-value=89 Score=23.84 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=54.8
Q ss_pred cEEEEecC-hhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH------HHHHHhcCCcCCCC
Q 026609 14 YVFLCVLP-LFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFD 85 (236)
Q Consensus 14 d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~~~ 85 (236)
.+++.+.+ =.|..|....-...-..|-.++... ..+++.+.+.+++.+++.+.++-.+ ++.+++..++...
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~- 168 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRGI- 168 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcCC-
Confidence 44444444 3577777333333336677777765 5789999999999999987655432 2233333222221
Q ss_pred CCCceEEeecCCCCCHHHHHH
Q 026609 86 LSSLKLVGSGAAPLGKELMEE 106 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~ 106 (236)
.++ ++.||.+++++..+.
T Consensus 169 --~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 169 --KIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred --CCe-EEEEChhcCHHHHhh
Confidence 333 677888998877654
No 186
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=56.07 E-value=42 Score=20.02 Aligned_cols=34 Identities=21% Similarity=0.503 Sum_probs=25.8
Q ss_pred eEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEc
Q 026609 171 GEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVD 219 (236)
Q Consensus 171 Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~G 219 (236)
|.+|++-.+- ..|-|...||...+..++++++.+
T Consensus 25 G~vWlT~~g~---------------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGD---------------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCC---------------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 8999976431 145589999999998888888765
No 187
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=55.67 E-value=99 Score=26.64 Aligned_cols=65 Identities=11% Similarity=0.131 Sum_probs=49.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
.+..+++++...++-.. .+...+++++..|+..+..+ .++..++...+++.+++.++........
T Consensus 50 ~g~~~g~~v~l~~~~~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 115 (508)
T TIGR02262 50 LGVKREERVLLLMLDGV--DFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPV 115 (508)
T ss_pred cCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHH
Confidence 46777888777665443 34456788999999988875 5788999999999999999877655433
No 188
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=55.46 E-value=78 Score=27.22 Aligned_cols=66 Identities=9% Similarity=-0.038 Sum_probs=51.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-....- ..+++++..|+..+..+ .+....+...+++.+++.++..+.....+
T Consensus 31 ~g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~ 97 (502)
T PRK08276 31 LGLREGDVVAILLENNPEFF--EVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAALADTA 97 (502)
T ss_pred hCCCCCCEEEEEeCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEccchhhHH
Confidence 46778898888888765543 36789999999999876 56788999999999999988877655443
No 189
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=55.44 E-value=67 Score=26.89 Aligned_cols=61 Identities=10% Similarity=-0.034 Sum_probs=48.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...+|-.-. ....+++++..|+..++.+ ......+...+++.++..++..+.
T Consensus 19 ~g~~~gd~v~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 19 QGIRSGSRVALVGQNSIE--MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 467889999888887754 3356789999999999876 467888999999999998876554
No 190
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=54.94 E-value=30 Score=23.62 Aligned_cols=18 Identities=22% Similarity=0.412 Sum_probs=14.4
Q ss_pred CCccccCCCcEEEEEeCC
Q 026609 143 GSAGALAPGVEALIVSVD 160 (236)
Q Consensus 143 ~~~g~p~~~~~~~~~~~~ 160 (236)
...|+|.+++++.+-..+
T Consensus 18 ta~GkPAagv~V~L~rl~ 35 (124)
T COG2351 18 TASGKPAAGVKVELYRLE 35 (124)
T ss_pred cccCCcCCCCEEEEEEec
Confidence 467899999999987643
No 191
>PRK07470 acyl-CoA synthetase; Validated
Probab=54.59 E-value=77 Score=27.46 Aligned_cols=62 Identities=5% Similarity=-0.081 Sum_probs=48.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
.++.++|++...++-... +...+++++..|+..+..+ ......+...+++.+++.++..+..
T Consensus 52 ~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~ 114 (528)
T PRK07470 52 RGVRKGDRILVHSRNCNQ--MFESMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADF 114 (528)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchh
Confidence 467788888777765544 3346789999999988876 5678899999999999998877654
No 192
>PRK07867 acyl-CoA synthetase; Validated
Probab=53.72 E-value=64 Score=28.15 Aligned_cols=63 Identities=6% Similarity=-0.087 Sum_probs=47.5
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
+..+++++...++-.. .+...+++++..|+.++..+ ....+++...+++.+++.++.......
T Consensus 50 ~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 113 (529)
T PRK07867 50 DPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE 113 (529)
T ss_pred CCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH
Confidence 4566777766666433 33356789999999999775 567889999999999999888776544
No 193
>PRK08315 AMP-binding domain protein; Validated
Probab=53.43 E-value=64 Score=28.21 Aligned_cols=61 Identities=8% Similarity=0.050 Sum_probs=48.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...++-...+ ...+++++..|+..+..+ ......+...+++.+++.++..+.
T Consensus 63 ~gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 124 (559)
T PRK08315 63 LGIEKGDRVGIWAPNVPEW--VLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADG 124 (559)
T ss_pred cCCCCCCEEEEECCCChHH--HHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEecc
Confidence 4678889888887766543 357789999999999876 467889999999999998877653
No 194
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=52.88 E-value=95 Score=27.18 Aligned_cols=63 Identities=8% Similarity=0.100 Sum_probs=49.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++...++-....-. .+++++..|+..+..+ ......+...+++.+++.++......
T Consensus 68 ~gi~~gd~V~i~~~n~~~~~~--~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 131 (557)
T PRK07059 68 RGLAKGARVAIMMPNVLQYPV--AIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFA 131 (557)
T ss_pred hCCCCCCEEEEECCCCHHHHH--HHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhH
Confidence 467888988888776655443 5689999999999875 46788999999999999988766543
No 195
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=52.66 E-value=65 Score=28.11 Aligned_cols=59 Identities=14% Similarity=0.152 Sum_probs=46.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 68 (236)
.++.++|++...+|-....- ..+++++..|+..+..+ .....++...++..++..++..
T Consensus 69 ~G~~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 69 KGIEPGDRVAFQLPGWCEFT--IIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEe
Confidence 46788999988877665433 47789999999988775 4678888899999998887754
No 196
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=52.62 E-value=89 Score=26.92 Aligned_cols=66 Identities=11% Similarity=0.060 Sum_probs=51.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...+|-....- ..+++++..|+..+... .....++...++..+++.++........+
T Consensus 31 ~g~~~g~~V~v~~~~~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 97 (509)
T PRK12406 31 LGVRPGDCVALLMRNDFAFF--EAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHADLLHGL 97 (509)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEccchhhhh
Confidence 46778898888877665533 46778899999999875 57789999999999999998776655544
No 197
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=52.08 E-value=72 Score=28.04 Aligned_cols=61 Identities=8% Similarity=0.049 Sum_probs=48.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...++-... +...+++++..|+..+... .+...++...+++.++..++..+.
T Consensus 70 ~gi~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~ 131 (562)
T PRK12492 70 TDLVPGDRIAVQMPNVLQ--YPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNM 131 (562)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccc
Confidence 367888998888776654 3357789999999998775 567889999999999998876553
No 198
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=52.07 E-value=62 Score=28.28 Aligned_cols=63 Identities=14% Similarity=0.083 Sum_probs=48.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++...++-....- ..+++++..|+..+..+ .....++...+++.++..++..+...
T Consensus 75 ~g~~~g~~V~i~~~~~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~ 138 (546)
T PLN02330 75 LGLRKGQVVVVVLPNVAEYG--IVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNY 138 (546)
T ss_pred hCCCCCCEEEEECCCchHHH--HHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchh
Confidence 46778888888877666544 36789999999988765 46788899999999998887665443
No 199
>PRK12583 acyl-CoA synthetase; Provisional
Probab=51.78 E-value=74 Score=27.75 Aligned_cols=61 Identities=7% Similarity=0.017 Sum_probs=48.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...+|-.... ...+++++..|+..+..+ .+..+++...+++.+++.++..+.
T Consensus 65 ~gi~~g~~V~i~~~~~~~~--~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 126 (558)
T PRK12583 65 LGVQPGDRVGIWAPNCAEW--LLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADA 126 (558)
T ss_pred hCCCCCCEEEEECCCChHH--HHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEecc
Confidence 4677888888887765543 346788999999998765 578899999999999998887653
No 200
>PLN02479 acetate-CoA ligase
Probab=51.44 E-value=1.2e+02 Score=26.79 Aligned_cols=63 Identities=8% Similarity=0.077 Sum_probs=49.7
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++...++-.-. +...+++++..|+..+..+ .+...++...+++.++..++..+...
T Consensus 65 ~g~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 65 RSIGPGSTVAVIAPNIPA--MYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred cCCCCCCEEEEECCCcHH--HHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhh
Confidence 378889998888885543 3346789999999998876 57788999999999999998876543
No 201
>PRK13388 acyl-CoA synthetase; Provisional
Probab=51.21 E-value=1e+02 Score=26.90 Aligned_cols=63 Identities=6% Similarity=-0.115 Sum_probs=47.8
Q ss_pred cC-CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 9 AG-ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 9 ~~-~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
++ .++|++...++-....- ..+++++..|+..+..+ .+..+++...+++.+++.++.......
T Consensus 47 g~~~~~~~V~i~~~n~~~~v--~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~ 111 (540)
T PRK13388 47 ADPDRPLHVGVLLGNTPEML--FWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRP 111 (540)
T ss_pred cCCCCCCEEEEECCCCcHHH--HHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhH
Confidence 45 57788888887555433 46789999999999775 567889999999999999887665443
No 202
>PRK07529 AMP-binding domain protein; Validated
Probab=50.99 E-value=66 Score=28.91 Aligned_cols=59 Identities=10% Similarity=0.005 Sum_probs=45.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVV 68 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 68 (236)
.++.++|++...+|-....- ..+++++..|..+.+.+...++++...+++.++..++..
T Consensus 78 ~Gi~~gd~V~i~~~n~~e~~--~~~lA~~~~Gi~~pi~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 78 LGVGPGDVVAFLLPNLPETH--FALWGGEAAGIANPINPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHhCEEEeCCCcCCHHHHHHHHHhcCCcEEEEe
Confidence 57889999999998665543 466788888854333346789999999999999998875
No 203
>PRK06178 acyl-CoA synthetase; Validated
Probab=50.63 E-value=1e+02 Score=27.02 Aligned_cols=66 Identities=12% Similarity=0.128 Sum_probs=51.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-....- ..+++++..|+..+..+ ......+...+++.++..++..+.....+
T Consensus 78 ~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l 144 (567)
T PRK06178 78 RGVGAGDRVAVFLPNCPQFH--IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVV 144 (567)
T ss_pred cCCCCCCEEEEECCCCcHHH--HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 46778888888877666533 46788899999888765 56788999999999999999888765544
No 204
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=50.44 E-value=42 Score=29.58 Aligned_cols=65 Identities=6% Similarity=-0.113 Sum_probs=53.4
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
+..+. ++|++..++|..-.+.. .++++...|+..... +.|.++.+...+.+..+..++.....++
T Consensus 59 ~~~gv-kGDrV~iymp~~pe~~~--a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~ 124 (528)
T COG0365 59 DLGGV-KGDRVAIYMPNSPEAVI--ALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFR 124 (528)
T ss_pred HhCCC-CCCEEEEEcCCCHHHHH--HHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEeccccc
Confidence 34556 89999999999888666 667899999887775 4789999999999999999987776554
No 205
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=50.40 E-value=71 Score=27.89 Aligned_cols=63 Identities=8% Similarity=-0.110 Sum_probs=48.7
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++...++-..-.-. .+++++..|+..+..+ ....+++...++..++..++......
T Consensus 59 ~g~~~gd~v~i~~~~~~~~~~--~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~ 122 (542)
T PRK06018 59 DGIKLGDRVATIAWNTWRHLE--AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFV 122 (542)
T ss_pred cCCCCCCEEEEEcCCchHHHH--HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccH
Confidence 467888888888776655444 5678899999998875 56788999999999999888765433
No 206
>PRK13382 acyl-CoA synthetase; Provisional
Probab=50.24 E-value=1.3e+02 Score=26.21 Aligned_cols=63 Identities=10% Similarity=-0.008 Sum_probs=49.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++...++-... +...+++++..|+..+..+ .....++...+++.+++.++......
T Consensus 88 ~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 151 (537)
T PRK13382 88 LPIGEPRVVGIMCRNHRG--FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFS 151 (537)
T ss_pred cCCCCCCEEEEEecCcHH--HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhH
Confidence 467888988888875554 4467889999999999876 46788999999999999888765443
No 207
>PRK06164 acyl-CoA synthetase; Validated
Probab=50.21 E-value=74 Score=27.70 Aligned_cols=61 Identities=13% Similarity=0.116 Sum_probs=48.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...++-....- ..+++++..|+..+..+ .....++...+++.+++.++..+.
T Consensus 55 ~g~~~g~~V~i~~~n~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 55 QGVRRGDRVAVWLPNCIEWV--VLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred hCCCCCCEEEEEcCCcHHHH--HHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccc
Confidence 46788898888877765433 46789999999998876 467888999999999999887554
No 208
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=49.88 E-value=1.1e+02 Score=27.87 Aligned_cols=66 Identities=6% Similarity=-0.113 Sum_probs=50.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++.-.++-..- +....++++..|++.+... .++++++...+++.++..++.....+..+
T Consensus 141 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l 207 (700)
T PTZ00216 141 LGLTKGSNVAIYEETRWE--WLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNL 207 (700)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHH
Confidence 578899998888886543 3346778899998887754 57888999999999999988877655544
No 209
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=49.77 E-value=1.3e+02 Score=25.63 Aligned_cols=63 Identities=10% Similarity=0.061 Sum_probs=49.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++...+|-.... ...+++++..|+..+..+ .....++...+++.++..++......
T Consensus 47 ~g~~~~~~v~i~~~~~~~~--~~~~la~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 110 (483)
T PRK03640 47 LGVKKGDRVALLMKNGMEM--ILVIHALQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFE 110 (483)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhh
Confidence 4577888888888776653 357889999999999986 46888999999999998887665443
No 210
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.44 E-value=89 Score=27.38 Aligned_cols=62 Identities=10% Similarity=0.129 Sum_probs=48.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
.+..++|++...++-..- +...+++++..|+..+..+ .....++.+.+++.+++.++..+..
T Consensus 69 ~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~ 131 (560)
T PRK08974 69 LGLKKGDRVALMMPNLLQ--YPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNF 131 (560)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccc
Confidence 467788888888765543 3356789999999999875 4678899999999999998876543
No 211
>PRK06188 acyl-CoA synthetase; Validated
Probab=48.51 E-value=94 Score=26.91 Aligned_cols=61 Identities=8% Similarity=-0.111 Sum_probs=48.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.+..+++++...++-....- ..+++++..|+..+..+ ......+...++..+++.+...+.
T Consensus 57 ~gv~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 118 (524)
T PRK06188 57 LGLGTGDAVALLSLNRPEVL--MAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPA 118 (524)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecc
Confidence 46778888888877655433 46779999999999876 467888899999999999887765
No 212
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=48.30 E-value=86 Score=27.40 Aligned_cols=60 Identities=15% Similarity=0.121 Sum_probs=47.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-....- ..+++++..|+..+..+ ....+++...++..++..++..+
T Consensus 75 ~g~~~g~~Val~~~n~~e~~--~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 75 LGVGRGDVVSCQLPNWWEFT--VLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred hCCCCCCEEEEECCCChHHH--HHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEec
Confidence 46788999988888666543 46789999999998775 46788899999999999887654
No 213
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=48.23 E-value=82 Score=30.47 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=49.7
Q ss_pred CCCcEEEEecChhhH-HhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeChH----HHHHHHhcC
Q 026609 11 ELDYVFLCVLPLFHV-FGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVPP----LILALAKHG 79 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~-~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P~----~~~~l~~~~ 79 (236)
.+--++++..|+.+- ......+..++..|.++++-|.. ....+.+++.+. ....+..+|. ....|+.+
T Consensus 683 ~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~- 761 (1038)
T PRK11904 683 HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTAD- 761 (1038)
T ss_pred ecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcC-
Confidence 455789999998773 34445688999999999997642 234566777664 3445555553 34445443
Q ss_pred CcCCCCCCCceEEeecCC
Q 026609 80 LVKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~ 97 (236)
+.++.+...|.
T Consensus 762 -------p~v~~V~FTGS 772 (1038)
T PRK11904 762 -------PRIAGVAFTGS 772 (1038)
T ss_pred -------CCcCeEEEECC
Confidence 23555555553
No 214
>PRK09088 acyl-CoA synthetase; Validated
Probab=48.02 E-value=94 Score=26.59 Aligned_cols=60 Identities=2% Similarity=-0.116 Sum_probs=47.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-....- ..+++++..|+..+..+ ......+...+++.+++.++...
T Consensus 42 ~g~~~~~~v~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 42 RGCVDGERLAVLARNSVWLV--ALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcc
Confidence 46778898888887766633 46789999999988775 56788999999999999887654
No 215
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=47.88 E-value=1.2e+02 Score=26.58 Aligned_cols=49 Identities=16% Similarity=0.118 Sum_probs=35.2
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 166 P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 219 (512)
T cd07124 166 PLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEA 219 (512)
T ss_pred cceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence 34689999998875443 34688999999999997642 345567777664
No 216
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=47.84 E-value=94 Score=26.91 Aligned_cols=49 Identities=8% Similarity=-0.017 Sum_probs=34.7
Q ss_pred CCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+.. .+..+|..|.++++-|.. ....+.+++.+.
T Consensus 135 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a 188 (478)
T cd07131 135 PIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEA 188 (478)
T ss_pred ceeEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhc
Confidence 3358999999887654433 567899999999997642 345566777764
No 217
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=46.59 E-value=1.5e+02 Score=26.01 Aligned_cols=59 Identities=8% Similarity=0.037 Sum_probs=47.8
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeChH
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
+.++|++...+|-...+- ..+++++..|+..+..++ .....+...++..++..++....
T Consensus 60 v~~gdrVail~~N~~e~~--~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 60 VKPGDRVAILLPNSPEFL--IAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred CCCCCEEEEECCCCHHHH--HHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEccc
Confidence 778999888888765544 477899999999999874 57888888888888888887765
No 218
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=46.16 E-value=1.5e+02 Score=26.48 Aligned_cols=63 Identities=11% Similarity=0.012 Sum_probs=48.2
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc-C-CCC--HHHHHHHHHhcCceEEEeChHHHHH
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-A-KFD--LEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~-~~~--~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
+.++|++...++-... +...+++++..|+..+.. + ... ++++...+++.++..++..+.....
T Consensus 89 ~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 89 AGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred cCCCCEEEEECCCChh--HHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 5788999888887754 335778999999998876 3 233 6788999999999999887765543
No 219
>PRK05850 acyl-CoA synthetase; Validated
Probab=46.08 E-value=1e+02 Score=27.19 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=48.8
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++|++...++-... +...+++++..|+..+..+. ...+++...++..++..++..+.....+
T Consensus 57 ~~gd~V~l~~~n~~~--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 57 STGDRAVILAPQGLE--YIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCEEEEEcCCccc--HHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 467888888886643 33578899999999998863 3567899999999999999887765544
No 220
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.86 E-value=1.4e+02 Score=26.04 Aligned_cols=63 Identities=6% Similarity=-0.043 Sum_probs=48.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++..+++-.... ...+++++..|+..+... .....++...+++.++..++..+...
T Consensus 62 ~g~~~g~~V~i~~~~~~~~--~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~ 125 (542)
T PRK07786 62 RGVGFGDRVLILMLNRTEF--VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA 125 (542)
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH
Confidence 4677888888777755443 346789999999999875 46788999999999999887766543
No 221
>PRK06060 acyl-CoA synthetase; Validated
Probab=45.84 E-value=1.1e+02 Score=27.86 Aligned_cols=61 Identities=11% Similarity=-0.004 Sum_probs=47.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...++-....-. .+++++..|+..+..+ .....++...+++.++..++....
T Consensus 50 ~g~~~g~~V~i~~~~~~~~~~--~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~ 111 (705)
T PRK06060 50 RGLSSGDRVLLCLPDSPDLVQ--LLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDA 111 (705)
T ss_pred cCCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchH
Confidence 467889999888887666444 6789999999888775 467888888999999888876554
No 222
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=44.99 E-value=46 Score=24.30 Aligned_cols=76 Identities=8% Similarity=0.085 Sum_probs=43.6
Q ss_pred hcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceEEeecCCCCC-HHHHHHHHHhCCCCc
Q 026609 37 QKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLG-KELMEECAKNVPSAT 115 (236)
Q Consensus 37 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~-~~~~~~~~~~~~~~~ 115 (236)
+..+.++++++.....+.+.+ ..++..-+..+.++..+++..... ..|..++||.+-. ....+.+.+.+|+..
T Consensus 3 ~~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~ 76 (172)
T PF03808_consen 3 LNSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLR 76 (172)
T ss_pred HHhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeE
Confidence 345566666554444555555 555534444556666666654322 3467777776532 445667777877666
Q ss_pred eee
Q 026609 116 VIQ 118 (236)
Q Consensus 116 v~~ 118 (236)
+.-
T Consensus 77 ivg 79 (172)
T PF03808_consen 77 IVG 79 (172)
T ss_pred EEE
Confidence 654
No 223
>PTZ00297 pantothenate kinase; Provisional
Probab=44.80 E-value=2e+02 Score=29.16 Aligned_cols=80 Identities=9% Similarity=-0.032 Sum_probs=59.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
+|+.++|++...++-..-.. ...++++..|+..+... .+...+...+.+.++.+++.....+..+.+... +
T Consensus 477 lGV~~GDrVaIls~N~~Ewv--ia~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~------~ 547 (1452)
T PTZ00297 477 LGVRPGDVIGVDCEASRNIV--ILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVVFADRNSVAAILTCRS------R 547 (1452)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc------c
Confidence 68899999988888554322 46678899999998874 356788999999999999988877776654321 2
Q ss_pred CceEEeecC
Q 026609 88 SLKLVGSGA 96 (236)
Q Consensus 88 ~lr~i~~~G 96 (236)
.+|.++...
T Consensus 548 ~Lr~IIv~d 556 (1452)
T PTZ00297 548 KLETVVYTH 556 (1452)
T ss_pred CCcEEEEEC
Confidence 577777754
No 224
>PRK13391 acyl-CoA synthetase; Provisional
Probab=44.56 E-value=1.6e+02 Score=25.46 Aligned_cols=64 Identities=2% Similarity=-0.132 Sum_probs=50.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
.++.+++++...++-....-. .+++++..|+..+..+ ..+...+...++..++..++..+....
T Consensus 44 ~g~~~~~~V~v~~~~~~~~~~--~~~a~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 108 (511)
T PRK13391 44 LGLKRGDHVAIFMENNLRYLE--VCWAAERSGLYYTCVNSHLTPAEAAYIVDDSGARALITSAAKLD 108 (511)
T ss_pred cCCCCCCEEEEECCCCHHHHH--HHHHHHHhccEEeccccccCHHHHHHHHhccCCcEEEEchhhHH
Confidence 367788888888776665443 6779999999999875 567889999999999999887765543
No 225
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.51 E-value=1e+02 Score=27.07 Aligned_cols=62 Identities=11% Similarity=0.037 Sum_probs=48.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
.++.++|++...++-....- ..+++++..|+..+..+ .+...++...++..+++.++..+..
T Consensus 69 ~gv~~gd~V~i~~~~~~~~~--~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~ 131 (563)
T PRK06710 69 LGVEKGDRVAIMLPNCPQAV--IGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLV 131 (563)
T ss_pred cCCCCCCEEEEECCCChHHH--HHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccc
Confidence 35677888888877665543 46788999998888775 5678899999999999998876643
No 226
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.22 E-value=1.4e+02 Score=25.97 Aligned_cols=63 Identities=6% Similarity=-0.169 Sum_probs=48.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
.++.++|++...+|-..-.- ..+++++..|+..+..+ ...+.++...++..++..++..+...
T Consensus 59 ~g~~~~d~v~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 122 (539)
T PRK07008 59 LGVEPGDRVGTLAWNGYRHL--EAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFL 122 (539)
T ss_pred cCCCCCCEEEEEcCCcHHHH--HHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhH
Confidence 46788898888887664322 45678899999988875 56788888999999998887766543
No 227
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=44.09 E-value=1e+02 Score=26.41 Aligned_cols=60 Identities=12% Similarity=-0.025 Sum_probs=45.6
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
++.++|++...++-....- ..+++++..|+..+..+ ....+.+...+++.++..++....
T Consensus 46 g~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~ 106 (502)
T TIGR01734 46 ILPKKSPIIVYGHMEPHML--VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAE 106 (502)
T ss_pred CCCCCCeEEEEeCCCHHHH--HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEeccc
Confidence 5677787777777665443 46789999999888776 456778899999999998887653
No 228
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=43.77 E-value=1.5e+02 Score=25.71 Aligned_cols=49 Identities=14% Similarity=0.026 Sum_probs=34.4
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--++....|+.+-..+ ...+..+|..|.++++-|.. ....+.+++.+.
T Consensus 145 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 198 (481)
T cd07141 145 PVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEA 198 (481)
T ss_pred ceeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc
Confidence 33588889998876665 34577899999999997642 344566677664
No 229
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=43.16 E-value=1.4e+02 Score=22.37 Aligned_cols=88 Identities=16% Similarity=0.174 Sum_probs=50.7
Q ss_pred cEEEEecC-hhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeChHH------HHHHHhcCCcCCCC
Q 026609 14 YVFLCVLP-LFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFD 85 (236)
Q Consensus 14 d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~~~ 85 (236)
.+++.+.| =.|..|....-...-..|-.++.. ...+++.+.+.+++.+++.+..+-+. +..+.+..++.. .
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~-~ 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG-L 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC-C
Confidence 34444444 357777733333333677777654 46789999999999999987655422 222222222221 1
Q ss_pred CCCceEEeecCCCCCHHH
Q 026609 86 LSSLKLVGSGAAPLGKEL 103 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~ 103 (236)
...+ .++.||..++.+.
T Consensus 163 ~~~~-~i~vGG~~~~~~~ 179 (201)
T cd02070 163 RDKV-KVMVGGAPVNQEF 179 (201)
T ss_pred CcCC-eEEEECCcCCHHH
Confidence 1123 3677888888653
No 230
>PRK05852 acyl-CoA synthetase; Validated
Probab=42.98 E-value=1.1e+02 Score=26.65 Aligned_cols=58 Identities=3% Similarity=-0.117 Sum_probs=46.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEe
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV 67 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 67 (236)
.++.++|++...+|-....- ..+++++..|+..+..+ ......+...++..++..++.
T Consensus 63 ~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 63 SGLLPGDRVALRMGSNAEFV--VALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred cCCCCCCEEEEECCCcHHHH--HHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEE
Confidence 46788899888877665433 47789999999999776 467888999999999998873
No 231
>PRK09192 acyl-CoA synthetase; Validated
Probab=42.87 E-value=1.6e+02 Score=26.07 Aligned_cols=66 Identities=6% Similarity=-0.104 Sum_probs=49.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CC-------HHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FD-------LEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-------~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++..+++-..-.- ..+++++..|+..+..+. +. .+++...++..++..++........+
T Consensus 69 ~gi~~gd~V~l~~~n~~~~~--~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 69 LGLKPGDRVALIAETDGDFV--EAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWV 142 (579)
T ss_pred hCCCCCCEEEEEcCCchhHH--HHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHH
Confidence 46788999988888754433 467899999999988742 21 57889999999999988776554433
No 232
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=42.84 E-value=99 Score=30.77 Aligned_cols=80 Identities=11% Similarity=0.093 Sum_probs=51.9
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC-C---HHHHHHHHHhc--CceEEEeChH----HHHHHHhcC
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF-D---LEMFLRAIEKH--RVTHIWVVPP----LILALAKHG 79 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~~--~~t~~~~~P~----~~~~l~~~~ 79 (236)
.+--++++.+|+++-..+. ..+..+|..|.++++-|.. + ...+.+++.+. ....+..+|. ....|+.++
T Consensus 767 ~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p 846 (1318)
T PRK11809 767 RPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADA 846 (1318)
T ss_pred ecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCC
Confidence 4457999999998855543 4577899999999997742 2 34567777764 4455666653 445555443
Q ss_pred CcCCCCCCCceEEeecCCC
Q 026609 80 LVKKFDLSSLKLVGSGAAP 98 (236)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~~ 98 (236)
.++.+.+.|..
T Consensus 847 --------~V~~V~FTGSt 857 (1318)
T PRK11809 847 --------RVRGVMFTGST 857 (1318)
T ss_pred --------CcCEEEEeCCH
Confidence 35566665543
No 233
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=42.38 E-value=81 Score=19.37 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=35.8
Q ss_pred HHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCce
Q 026609 51 EMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATV 116 (236)
Q Consensus 51 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v 116 (236)
..+++.+.+++++++.- ..+-.++-..+.+.......+.+.+.+.+|++.+
T Consensus 19 ~~i~~~l~~~~v~ii~K---------------~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIAK---------------DTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEEE---------------ecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 56788899999988753 1122356666666666777888888888886554
No 234
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=42.23 E-value=10 Score=15.81 Aligned_cols=9 Identities=67% Similarity=1.232 Sum_probs=6.1
Q ss_pred ccccccccc
Q 026609 120 GYGLTETSG 128 (236)
Q Consensus 120 ~YG~tE~g~ 128 (236)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 388887643
No 235
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=41.69 E-value=1.8e+02 Score=25.05 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=47.8
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC--ceEEEeCh----HHHHHHHhcCCc
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR--VTHIWVVP----PLILALAKHGLV 81 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~--~t~~~~~P----~~~~~l~~~~~~ 81 (236)
--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.. ...+..++ .....|+.+
T Consensus 118 ~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~--- 194 (454)
T cd07109 118 HGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAH--- 194 (454)
T ss_pred eeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcC---
Confidence 3588899998776444 23577999999999997742 3456777777743 33343333 344555543
Q ss_pred CCCCCCCceEEeecCC
Q 026609 82 KKFDLSSLKLVGSGAA 97 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~ 97 (236)
+.++.+..+|.
T Consensus 195 -----~~v~~v~ftGs 205 (454)
T cd07109 195 -----PGVDHISFTGS 205 (454)
T ss_pred -----CCCCEEEEECC
Confidence 23556666663
No 236
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=41.68 E-value=1.7e+02 Score=25.46 Aligned_cols=66 Identities=9% Similarity=-0.036 Sum_probs=41.3
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcCc-----eEEEeChHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHRV-----THIWVVPPLILALAKH 78 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~~-----t~~~~~P~~~~~l~~~ 78 (236)
--++....|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++... ..+.+.......|+++
T Consensus 137 ~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~ 212 (477)
T TIGR01722 137 LGVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEH 212 (477)
T ss_pred cceEEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcC
Confidence 35888899887765443 345688999999999764 2 34456777777532 2333333455566554
No 237
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=40.64 E-value=1.1e+02 Score=30.29 Aligned_cols=80 Identities=11% Similarity=0.071 Sum_probs=50.3
Q ss_pred CCCcEEEEecChhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeChH----HHHHHHhcC
Q 026609 11 ELDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVPP----LILALAKHG 79 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P~----~~~~l~~~~ 79 (236)
.+--++++.+|+.+-.. +...+..++..|.++++-|.. ....+.+++.+. ....+..+|. ....|+.++
T Consensus 675 ~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p 754 (1208)
T PRK11905 675 KPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADP 754 (1208)
T ss_pred cCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCC
Confidence 34578999999887433 334678999999999997742 244567777774 3444555542 455555543
Q ss_pred CcCCCCCCCceEEeecCCC
Q 026609 80 LVKKFDLSSLKLVGSGAAP 98 (236)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~~ 98 (236)
.++.+.++|..
T Consensus 755 --------~v~~V~FTGSt 765 (1208)
T PRK11905 755 --------RIAGVMFTGST 765 (1208)
T ss_pred --------CcCEEEEeCCH
Confidence 34555555543
No 238
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=40.05 E-value=2.1e+02 Score=24.84 Aligned_cols=65 Identities=14% Similarity=0.042 Sum_probs=40.6
Q ss_pred cEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeC---hHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV---PPLILALAKH 78 (236)
Q Consensus 14 d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~---P~~~~~l~~~ 78 (236)
-+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++. ....+..+ ......|+++
T Consensus 138 GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~ 212 (478)
T cd07085 138 GVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDH 212 (478)
T ss_pred eEEEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcC
Confidence 588888897766544 24477899999999997642 345567777764 22333333 3344555544
No 239
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=39.70 E-value=1.9e+02 Score=24.71 Aligned_cols=50 Identities=16% Similarity=0.071 Sum_probs=35.0
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++.+.
T Consensus 95 ~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~a 149 (429)
T cd07100 95 EPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREA 149 (429)
T ss_pred EeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 344678888998875533 24578899999999997642 344667777764
No 240
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=39.51 E-value=1.3e+02 Score=25.66 Aligned_cols=60 Identities=12% Similarity=-0.009 Sum_probs=45.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++....+-... +...+++++..|+..+..+ ....+.+...++..++..++...
T Consensus 47 ~g~~~~~~v~~~~~~~~~--~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (503)
T PRK04813 47 LKLPDKSPIIVFGHMSPE--MLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATE 107 (503)
T ss_pred hCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecc
Confidence 456778888888775543 3357889999999988776 45678888899998888887654
No 241
>PRK12582 acyl-CoA synthetase; Provisional
Probab=39.14 E-value=1.1e+02 Score=27.46 Aligned_cols=60 Identities=7% Similarity=-0.002 Sum_probs=45.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CC-----HHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FD-----LEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-..- +...+++++..|+..+..++ +. .+++...++..++..++...
T Consensus 100 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~ 165 (624)
T PRK12582 100 LGLDPGRPVMILSGNSIE--HALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQS 165 (624)
T ss_pred cCCCCCCEEEEecCCCHH--HHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecC
Confidence 477889999988884433 33577899999999988753 33 37888888888888877643
No 242
>PRK13390 acyl-CoA synthetase; Provisional
Probab=39.05 E-value=2.1e+02 Score=24.55 Aligned_cols=60 Identities=8% Similarity=-0.081 Sum_probs=46.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-....- ..+++++..|+..+..+ .+.+.++...++..++..+....
T Consensus 44 ~gv~~gd~V~i~~~n~~~~~--~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (501)
T PRK13390 44 AGLRTGDVVALLSDNSPEAL--VVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVASA 104 (501)
T ss_pred cCCCCCCEEEEEeCCCHHHH--HHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEEcc
Confidence 46788898888877666543 46789999999988765 57788898999988888877654
No 243
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=38.85 E-value=1.3e+02 Score=26.16 Aligned_cols=60 Identities=12% Similarity=-0.008 Sum_probs=46.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-....- ..+++++..|+..+..+ .....++...++..+++.++..+
T Consensus 73 ~g~~~g~~V~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 133 (538)
T TIGR03208 73 LGVGRGDVVSFQLPNRWEFT--ALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPS 133 (538)
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEcc
Confidence 46778888888877554432 46789999999988765 46788899999999999888654
No 244
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=38.47 E-value=1.8e+02 Score=24.86 Aligned_cols=50 Identities=20% Similarity=0.093 Sum_probs=35.4
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..++..|.++++-|.. ....+.+++.+.
T Consensus 97 ~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~a 151 (432)
T cd07105 97 EPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEA 151 (432)
T ss_pred ecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHc
Confidence 3446888899988865542 3578999999999997642 344566777664
No 245
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=38.31 E-value=1.7e+02 Score=25.44 Aligned_cols=47 Identities=15% Similarity=0.048 Sum_probs=32.8
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 136 GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~a 187 (482)
T cd07119 136 GVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEA 187 (482)
T ss_pred eeEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHc
Confidence 5888888977655442 3467899999999997642 344567777764
No 246
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=38.27 E-value=1.3e+02 Score=20.46 Aligned_cols=84 Identities=17% Similarity=0.024 Sum_probs=47.1
Q ss_pred hhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH------HHHHHhcCCcCCCCCCCceEEeec
Q 026609 23 FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFDLSSLKLVGSG 95 (236)
Q Consensus 23 ~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~------~~~l~~~~~~~~~~l~~lr~i~~~ 95 (236)
.|..|........-..|-.++... ..+++.+.+.+.+.+++++...-+. +..+++..++. ..+.++ ++.|
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~--~~~~i~-i~~G 87 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL--GAGDIL-VVGG 87 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc--CCCCCE-EEEE
Confidence 466777333333335555555554 4678899999999999997765422 22333322222 122333 5555
Q ss_pred CCCCCHHHHHHHHHh
Q 026609 96 AAPLGKELMEECAKN 110 (236)
Q Consensus 96 G~~~~~~~~~~~~~~ 110 (236)
|. .+++..+.+.+.
T Consensus 88 G~-~~~~~~~~~~~~ 101 (122)
T cd02071 88 GI-IPPEDYELLKEM 101 (122)
T ss_pred CC-CCHHHHHHHHHC
Confidence 54 455666666655
No 247
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=38.05 E-value=2.1e+02 Score=24.59 Aligned_cols=50 Identities=12% Similarity=0.044 Sum_probs=35.4
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR 61 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~ 61 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++..
T Consensus 117 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aG 171 (448)
T TIGR01780 117 PVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAG 171 (448)
T ss_pred eeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcC
Confidence 335888999987765553 3678899999999997742 2445677777653
No 248
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=37.98 E-value=1.6e+02 Score=25.92 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=34.0
Q ss_pred CCCcEEEEecChhhHH-hHHHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVF-GLAVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~-g~~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-. .....+..+|..|.++++-|. . ....+.+++.+.
T Consensus 166 ~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~ea 220 (518)
T cd07125 166 HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEA 220 (518)
T ss_pred ecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHc
Confidence 3446788888887633 333567899999999999764 2 235566777664
No 249
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=37.67 E-value=2.1e+02 Score=24.61 Aligned_cols=49 Identities=12% Similarity=-0.023 Sum_probs=34.9
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 120 P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a 173 (456)
T cd07110 120 PVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEA 173 (456)
T ss_pred cceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHc
Confidence 335889999987765553 3577899999999997642 344567777765
No 250
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=37.48 E-value=1.8e+02 Score=25.52 Aligned_cols=59 Identities=14% Similarity=0.167 Sum_probs=38.5
Q ss_pred CCCcEEEEecChhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh
Q 026609 11 ELDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP 69 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P 69 (236)
.+--+++...|+.+-.. ....+..+|..|.++++-|.. ....+.+++++. ....+..++
T Consensus 166 ~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~ 231 (511)
T TIGR01237 166 QPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVP 231 (511)
T ss_pred ecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEcc
Confidence 34468889999887543 335688999999999997642 344566666663 333444443
No 251
>PLN02278 succinic semialdehyde dehydrogenase
Probab=37.16 E-value=1.8e+02 Score=25.52 Aligned_cols=50 Identities=8% Similarity=-0.043 Sum_probs=34.9
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC-C---HHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF-D---LEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..+|..|.++++-|.. . ...+.+++.+.
T Consensus 159 ~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~ea 213 (498)
T PLN02278 159 QPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQA 213 (498)
T ss_pred ecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 3446899999998875553 3678899999999997642 2 33456666663
No 252
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=37.13 E-value=1.8e+02 Score=25.24 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=33.5
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 137 GVv~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 188 (473)
T cd07097 137 GVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEA 188 (473)
T ss_pred eeEEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc
Confidence 5788888988766553 3467899999999997642 344566677664
No 253
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=36.61 E-value=1.4e+02 Score=25.92 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=45.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-....- ..+++++..|+..+... ....+.+...+++.++..+...+
T Consensus 68 ~g~~~g~~V~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~ 128 (527)
T TIGR02275 68 LGIGQGDTAVVQLPNIAEFY--IVFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDR 128 (527)
T ss_pred cCCCCCCEEEEECCCcHHHH--HHHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcC
Confidence 46788888888876554433 46788999999887654 45678889999999988887654
No 254
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=36.33 E-value=2.2e+02 Score=24.95 Aligned_cols=50 Identities=6% Similarity=-0.099 Sum_probs=36.4
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 153 ~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea 207 (500)
T cd07083 153 VGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA 207 (500)
T ss_pred eccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHc
Confidence 3447899999998875553 4678899999999997642 344567777665
No 255
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=36.22 E-value=1.6e+02 Score=26.31 Aligned_cols=60 Identities=3% Similarity=-0.007 Sum_probs=45.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CC-----HHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FD-----LEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-..-.- ..+++++..|++++..++ .. ..++...+++.++..++...
T Consensus 89 ~Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 89 RGLSAERPLMILSGNSIEHA--LLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred cCCCCCCEEEEecCCCHHHH--HHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 46788899888887665433 467899999999998763 33 67888889988888887654
No 256
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=36.10 E-value=2.7e+02 Score=24.06 Aligned_cols=49 Identities=20% Similarity=0.179 Sum_probs=34.1
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 137 P~Gvv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 190 (471)
T cd07139 137 PVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEA 190 (471)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHc
Confidence 335788888888766653 3467899999999997642 345566677664
No 257
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=36.05 E-value=2.2e+02 Score=27.60 Aligned_cols=65 Identities=14% Similarity=0.055 Sum_probs=51.6
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHHH
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 76 (236)
..++|++...+|-....-. .+++++..|+..+..+ ....+++...+++.+++.++..+.....+.
T Consensus 662 ~~~g~~V~i~~~n~~~~~~--~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 662 LKDEENVGILLPPSVAGAL--ANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CCCCCeEEEECCCchHHHH--HHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 4678888888887765444 6789999999988765 467899999999999999998877665553
No 258
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=35.40 E-value=2.6e+02 Score=23.79 Aligned_cols=50 Identities=20% Similarity=0.168 Sum_probs=35.4
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 70 ~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 124 (409)
T PRK10090 70 RALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEI 124 (409)
T ss_pred ecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHc
Confidence 344688889998885544 24578889999999997642 345567777765
No 259
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=35.17 E-value=3e+02 Score=24.25 Aligned_cols=49 Identities=18% Similarity=0.219 Sum_probs=35.4
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK----FDLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|. .....+.+++++.
T Consensus 171 P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~a 224 (514)
T PRK03137 171 PLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEA 224 (514)
T ss_pred cCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 33589999998875444 3467899999999999764 2345567777765
No 260
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=35.04 E-value=1.9e+02 Score=25.07 Aligned_cols=78 Identities=15% Similarity=0.047 Sum_probs=47.3
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh---HHHHHHHhcCCc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP---PLILALAKHGLV 81 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P---~~~~~l~~~~~~ 81 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++. ....+..++ .....|++++
T Consensus 142 P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~-- 219 (477)
T cd07113 142 PVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHP-- 219 (477)
T ss_pred ecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCC--
Confidence 335788888988766543 3467899999999997642 244567777764 333444443 2344455442
Q ss_pred CCCCCCCceEEeecCC
Q 026609 82 KKFDLSSLKLVGSGAA 97 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~ 97 (236)
.++.+..+|.
T Consensus 220 ------~v~~V~fTGS 229 (477)
T cd07113 220 ------DVAKVSFTGS 229 (477)
T ss_pred ------CCCEEEEECc
Confidence 3556655554
No 261
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=34.94 E-value=1.7e+02 Score=25.49 Aligned_cols=60 Identities=8% Similarity=-0.019 Sum_probs=46.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-....- ..+++++..|+..+... .....++...++..++..++...
T Consensus 66 ~gi~~g~~V~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~ 126 (541)
T TIGR03205 66 AGYGKDASVALYLGNTPDHP--INFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLITSD 126 (541)
T ss_pred cCCCCCCEEEEECCCChHHH--HHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeC
Confidence 46778898888888554432 46778899999998765 46788999999999999987654
No 262
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=34.62 E-value=3.5e+02 Score=24.52 Aligned_cols=68 Identities=12% Similarity=0.005 Sum_probs=43.1
Q ss_pred CCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEeCh---HHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVVP---PLILALAKH 78 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~~~~~P---~~~~~l~~~ 78 (236)
.+--+++...|+.+-..+.. .+..+|..|.++++-|. . ....+.+++.+. ....+..++ .....|+.+
T Consensus 248 eP~GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~ 325 (604)
T PLN02419 248 EPLGVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDD 325 (604)
T ss_pred cCccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhC
Confidence 45579999999887766643 36678999999999764 2 234566666665 333333333 344555543
No 263
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=34.51 E-value=1.4e+02 Score=25.52 Aligned_cols=57 Identities=9% Similarity=0.088 Sum_probs=42.4
Q ss_pred CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
..++++...++-... +...+++++..|+.++..+ .....++...+++.+++.++...
T Consensus 43 ~~~~~V~i~~~n~~e--~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~~ 100 (452)
T PRK07445 43 RTPPKILLAESDPLQ--FLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGLD 100 (452)
T ss_pred CCCCeEEEecCCCHH--HHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEecC
Confidence 457777777664422 2256788899999999876 46788899999999998887643
No 264
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=34.39 E-value=2.4e+02 Score=24.58 Aligned_cols=50 Identities=14% Similarity=0.114 Sum_probs=35.5
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 146 ~P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a 200 (480)
T cd07111 146 KPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA 200 (480)
T ss_pred eecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 3446889999988776553 3467899999999997742 244566777765
No 265
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=34.05 E-value=2.8e+02 Score=24.33 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=35.6
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++.
T Consensus 157 ~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 211 (501)
T PLN02766 157 EPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLA 211 (501)
T ss_pred ccceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhc
Confidence 4447888999988776553 457788999999999764 2 234566777664
No 266
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=33.88 E-value=1.8e+02 Score=20.92 Aligned_cols=83 Identities=13% Similarity=0.148 Sum_probs=53.7
Q ss_pred HHhhcCcEEEEcCCCCHHHHHHHHHhc-CceEEEeChHHHHHHHhcCCcCCCCCCCceEEeecCCCCC-------HHHHH
Q 026609 34 GQLQKGSCIILMAKFDLEMFLRAIEKH-RVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLG-------KELME 105 (236)
Q Consensus 34 ~~l~~G~~~~~~~~~~~~~~~~~i~~~-~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~-------~~~~~ 105 (236)
.-+-.|.++++-.+.+...+.+.|.+. ++|++--.......|.+. +.++.++.||+.-+ +...+
T Consensus 15 ~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~ 86 (161)
T PF00455_consen 15 SLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALE 86 (161)
T ss_pred HhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHH
Confidence 445667787777777888889988888 777776666666666543 25788999985333 34455
Q ss_pred HHHHhCCCCceeeccccccc
Q 026609 106 ECAKNVPSATVIQVGYGLTE 125 (236)
Q Consensus 106 ~~~~~~~~~~v~~~~YG~tE 125 (236)
.+++...+..++. .-|-++
T Consensus 87 ~l~~~~~d~afi~-~~gi~~ 105 (161)
T PF00455_consen 87 ALRQFRFDKAFIG-ADGISE 105 (161)
T ss_pred HHHhhccceEEec-ccEecC
Confidence 5555544344444 455444
No 267
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=33.64 E-value=2.8e+02 Score=23.52 Aligned_cols=50 Identities=12% Similarity=0.010 Sum_probs=35.0
Q ss_pred CCcEEEEecChhhH-HhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC
Q 026609 12 LDYVFLCVLPLFHV-FGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR 61 (236)
Q Consensus 12 ~~d~~l~~~p~~~~-~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~ 61 (236)
+-.+++...|..+- ......+..++..|.++++-+.. ....+.+++++..
T Consensus 96 P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag 150 (432)
T cd07078 96 PLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAG 150 (432)
T ss_pred ecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcC
Confidence 34588888887665 33335678999999999987642 3456777777754
No 268
>PRK08308 acyl-CoA synthetase; Validated
Probab=33.49 E-value=2.3e+02 Score=23.63 Aligned_cols=60 Identities=10% Similarity=-0.015 Sum_probs=44.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.+..+++++...++-...+- ..+++++..|++.+..++ ...+.+..++++.++..++...
T Consensus 27 ~~~~~g~~V~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (414)
T PRK08308 27 FQEAAGNRFAVCLKDPFDII--TLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLYGE 87 (414)
T ss_pred cCCCCCCEEEEECCCChHHH--HHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEecC
Confidence 35677888877776544432 466788899999998764 5677888888999988877654
No 269
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=33.31 E-value=2.2e+02 Score=24.54 Aligned_cols=49 Identities=16% Similarity=0.097 Sum_probs=34.2
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 123 P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~a 176 (459)
T cd07089 123 PVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAET 176 (459)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 33588888997765433 24578999999999997642 345567777764
No 270
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=33.29 E-value=1.2e+02 Score=18.82 Aligned_cols=15 Identities=27% Similarity=0.244 Sum_probs=12.1
Q ss_pred cccCCCcEEEEEeCC
Q 026609 146 GALAPGVEALIVSVD 160 (236)
Q Consensus 146 g~p~~~~~~~~~~~~ 160 (236)
++|++++.|++++.+
T Consensus 8 ~~P~~~~~V~L~e~d 22 (80)
T PF01060_consen 8 GKPAKNVKVKLWEDD 22 (80)
T ss_pred CccCCCCEEEEEECC
Confidence 468899999999853
No 271
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=32.95 E-value=2e+02 Score=24.72 Aligned_cols=49 Identities=10% Similarity=0.043 Sum_probs=34.6
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 123 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a 176 (456)
T cd07145 123 PIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA 176 (456)
T ss_pred cceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence 345888888888765442 3577899999999997642 345567777764
No 272
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=32.90 E-value=2.4e+02 Score=23.93 Aligned_cols=60 Identities=7% Similarity=-0.100 Sum_probs=45.7
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-....- ..+++++..|+..+..+ ....+++-..+++.++..++...
T Consensus 48 ~g~~~~~~v~l~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~ 108 (458)
T PRK09029 48 QGVVEGSGVALRGKNSPETL--LAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLE 108 (458)
T ss_pred cCCCCCCEEEEecCCCHHHH--HHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 36778888887776655433 46788999999999875 46788888899999988877544
No 273
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=32.76 E-value=2.6e+02 Score=24.17 Aligned_cols=68 Identities=12% Similarity=-0.015 Sum_probs=42.0
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh---cCceEEEeCh----HHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEK---HRVTHIWVVP----PLILALAKH 78 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~---~~~t~~~~~P----~~~~~l~~~ 78 (236)
.+--++....|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++ .....+..++ .....|.++
T Consensus 116 ~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~ 195 (455)
T cd07120 116 EPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVAS 195 (455)
T ss_pred ecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcC
Confidence 3446888889888665543 3477899999999997642 24456777776 3333343333 344555544
No 274
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.53 E-value=3.5e+02 Score=24.23 Aligned_cols=62 Identities=8% Similarity=0.007 Sum_probs=45.5
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc-CC-C--CHHHHHHHHHhcCceEEEeChHHHH
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AK-F--DLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~-~--~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
+.++|++...++-...+- ..+++++..|+..+.. +. . ...++...+++.++..++..+....
T Consensus 76 ~~~gd~V~i~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 141 (631)
T PRK07769 76 TKPGDRVAILAPQNLDYL--IAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAE 141 (631)
T ss_pred cCCCCEEEEEcCCChHHH--HHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHH
Confidence 577888888887665433 4678999999988865 22 2 2567888999999999887765443
No 275
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=32.20 E-value=3e+02 Score=23.74 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=34.6
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+=-+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 124 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 177 (455)
T cd07148 124 PIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA 177 (455)
T ss_pred cceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHc
Confidence 336778888877665542 3578889999999997642 345677777765
No 276
>PLN02467 betaine aldehyde dehydrogenase
Probab=32.19 E-value=3.5e+02 Score=23.75 Aligned_cols=50 Identities=14% Similarity=-0.023 Sum_probs=35.3
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK----FDLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~ 60 (236)
++--+++...|+.+-..+. ..+..+|..|.++++-|. .....+.+++++.
T Consensus 150 ~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~ea 204 (503)
T PLN02467 150 EPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREV 204 (503)
T ss_pred ecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHc
Confidence 3446888889988776553 346688999999999764 2345566777664
No 277
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=32.05 E-value=2.5e+02 Score=24.22 Aligned_cols=50 Identities=14% Similarity=0.014 Sum_probs=35.6
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 118 ~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a 172 (454)
T cd07118 118 EPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEA 172 (454)
T ss_pred ecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 344688999998776554 34677999999999997642 344566777775
No 278
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=31.96 E-value=3.3e+02 Score=23.53 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=34.6
Q ss_pred CCCcEEEEecChhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-.. ....+..+|..|.++++-|.. ....+.+++++.
T Consensus 129 ~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a 183 (466)
T cd07138 129 EPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEA 183 (466)
T ss_pred eecceEEEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHc
Confidence 34458888999766533 334578999999999997642 345567777765
No 279
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=31.49 E-value=3.1e+02 Score=24.08 Aligned_cols=50 Identities=18% Similarity=0.117 Sum_probs=35.6
Q ss_pred CCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (236)
.+--+++...|+++-..+.. .+..+|..|.++++-|. . ....+.+.+.+.
T Consensus 141 ~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~a 195 (489)
T cd07126 141 WPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLC 195 (489)
T ss_pred ecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 34468899999887765544 47899999999999764 2 344566666554
No 280
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=30.84 E-value=3.4e+02 Score=23.61 Aligned_cols=50 Identities=16% Similarity=-0.001 Sum_probs=34.9
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
++--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 131 ~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~a 185 (484)
T TIGR03240 131 RPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKA 185 (484)
T ss_pred ecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence 345689999998866443 24577899999999997642 244566666664
No 281
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=30.73 E-value=1.6e+02 Score=25.37 Aligned_cols=57 Identities=16% Similarity=0.162 Sum_probs=40.1
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC----CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA----KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
..++|.++.-.|-|+.+-. ..-..|..++-.| +.+++.+.+.+++.++..++.+|+.
T Consensus 176 ~~pGd~v~vE~PtY~~~~~-----~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~ 236 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ-----ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTF 236 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH-----HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCC
Confidence 4577888877777766443 2234577777654 3678888888888888888888864
No 282
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=30.44 E-value=2.5e+02 Score=24.04 Aligned_cols=48 Identities=13% Similarity=0.026 Sum_probs=32.6
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++
T Consensus 118 P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~ 170 (450)
T cd07092 118 PIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE 170 (450)
T ss_pred ccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh
Confidence 34588889998765444 34567899999999997642 23455666655
No 283
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=30.33 E-value=2.2e+02 Score=24.61 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=33.1
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 143 GVv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~a 194 (476)
T cd07091 143 GVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEA 194 (476)
T ss_pred eEEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHc
Confidence 5788888888765543 3566899999999997742 234566777764
No 284
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=30.32 E-value=2.7e+02 Score=24.21 Aligned_cols=49 Identities=16% Similarity=0.059 Sum_probs=34.6
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++.+.
T Consensus 144 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a 197 (481)
T cd07143 144 PIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA 197 (481)
T ss_pred cceeEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhc
Confidence 33688888888876655 34678899999999997642 244566667664
No 285
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=30.27 E-value=2e+02 Score=28.46 Aligned_cols=65 Identities=8% Similarity=0.077 Sum_probs=49.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeChHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
.+..++|++...++-.... ...+++++..|+..+..++ ....++..+++..++..+...+.....
T Consensus 503 ~g~~~g~~V~l~~~~~~~~--i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~ 568 (1296)
T PRK10252 503 RGVKPGDSVAVALPRSVFL--TLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPR 568 (1296)
T ss_pred cCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhh
Confidence 4677888888887766553 3577899999999998864 567788899999999998877654433
No 286
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=30.25 E-value=29 Score=24.75 Aligned_cols=41 Identities=15% Similarity=0.085 Sum_probs=32.3
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccccc
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTET 126 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~ 126 (236)
-++....++++|..+-+..++.+.+......... .||+|-.
T Consensus 59 ~l~~aD~viiTGsTlvN~Ti~~iL~~~~~~~~vi-l~GpS~~ 99 (147)
T PF04016_consen 59 ILPWADVVIITGSTLVNGTIDDILELARNAREVI-LYGPSAP 99 (147)
T ss_dssp HGGG-SEEEEECHHCCTTTHHHHHHHTTTSSEEE-EESCCGG
T ss_pred HHccCCEEEEEeeeeecCCHHHHHHhCccCCeEE-EEecCch
Confidence 3456788999999999888899998876567777 8998854
No 287
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=30.20 E-value=2.6e+02 Score=24.08 Aligned_cols=49 Identities=20% Similarity=0.156 Sum_probs=34.4
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-... ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 133 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~a 186 (468)
T cd07088 133 PIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEA 186 (468)
T ss_pred cceeEEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 33588888888766544 34688999999999997642 344566777764
No 288
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=29.70 E-value=3.8e+02 Score=23.38 Aligned_cols=69 Identities=16% Similarity=0.047 Sum_probs=43.0
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcC-----ceEEEeCh-HHHHHHHhcC
Q 026609 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHR-----VTHIWVVP-PLILALAKHG 79 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~-----~t~~~~~P-~~~~~l~~~~ 79 (236)
.+--++....|+++-..+ ...+..+|..|+++++-|. .+...+.+++.+.. ++++.+.. ..-..|+.++
T Consensus 132 ~P~GVv~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p 211 (472)
T COG1012 132 EPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHP 211 (472)
T ss_pred ecceEEEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCC
Confidence 344688888887766533 2457889999999999763 23455666665542 33444422 2556666554
No 289
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=29.66 E-value=3.7e+02 Score=23.53 Aligned_cols=65 Identities=15% Similarity=0.088 Sum_probs=39.0
Q ss_pred cEEEEecChhhHHhHHHH-HHHHhhcCcEEEEcCCCC----HHH----HHHHHHhc--CceEEEeCh----HHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLAVI-TCGQLQKGSCIILMAKFD----LEM----FLRAIEKH--RVTHIWVVP----PLILALAKH 78 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~~~-~~~~l~~G~~~~~~~~~~----~~~----~~~~i~~~--~~t~~~~~P----~~~~~l~~~ 78 (236)
-++....|+.+-...... ...+|..|.++++-|... ... +.+.+++. ....+..++ .....|+++
T Consensus 106 GVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~ 185 (488)
T TIGR02518 106 GVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKN 185 (488)
T ss_pred eEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhC
Confidence 577788887765544333 678999999999987432 222 33344553 344455444 345566654
No 290
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=29.55 E-value=2.8e+02 Score=23.77 Aligned_cols=49 Identities=8% Similarity=0.033 Sum_probs=33.5
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 123 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~a 176 (452)
T cd07147 123 PIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAET 176 (452)
T ss_pred ceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHc
Confidence 446778888877665442 2467899999999997642 344567777764
No 291
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=29.54 E-value=3.6e+02 Score=23.31 Aligned_cols=48 Identities=15% Similarity=0.015 Sum_probs=33.6
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 125 ~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a 177 (462)
T cd07112 125 LGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEA 177 (462)
T ss_pred eeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhc
Confidence 35888888988765542 3466899999999997642 345567777664
No 292
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=29.48 E-value=3.8e+02 Score=23.33 Aligned_cols=47 Identities=11% Similarity=-0.019 Sum_probs=33.5
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 144 GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~a 195 (488)
T PRK13252 144 GVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEA 195 (488)
T ss_pred eEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHc
Confidence 5778888888765543 3567899999999997642 345667777764
No 293
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=28.81 E-value=60 Score=18.77 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=11.5
Q ss_pred CceEEEcCCCcEEEEcc
Q 026609 204 GDLGYFDGDGQLYVVDR 220 (236)
Q Consensus 204 gD~~~~~~~g~~~~~GR 220 (236)
|.+.+.++||.+.+.|+
T Consensus 33 ~~i~Y~~~dg~yli~G~ 49 (57)
T PF10411_consen 33 GGILYVDEDGRYLIQGQ 49 (57)
T ss_dssp TEEEEEETTSSEEEES-
T ss_pred CeEEEEcCCCCEEEEeE
Confidence 45666777777777775
No 294
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=28.36 E-value=71 Score=20.87 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=21.1
Q ss_pred ccccCCCcEEEEEeCCCCCCCCCC---CceEEEEe
Q 026609 145 AGALAPGVEALIVSVDTQKPLPPN---QLGEIWLR 176 (236)
Q Consensus 145 ~g~p~~~~~~~~~~~~~~~~~~~g---~~Gel~v~ 176 (236)
-+.|++|+++++.+...++++..+ ..|...+.
T Consensus 24 tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~ 58 (97)
T PF11974_consen 24 TGKPVAGAEVELYDSRNGQVLASGKTDADGFASFD 58 (97)
T ss_pred CCCccCCCEEEEEECCCCcEeeeeeeCCCceEEec
Confidence 478999999999983355554433 33555543
No 295
>PRK07868 acyl-CoA synthetase; Validated
Probab=28.29 E-value=3.1e+02 Score=26.48 Aligned_cols=64 Identities=16% Similarity=0.003 Sum_probs=47.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-....- ..+++++..|+..+..++. .++..+++..+++.++..+..+..+
T Consensus 492 ~Gv~~Gd~VaI~~~n~~e~v--~a~lA~~~aGav~vpl~p~--~~l~~il~~s~~~~li~~~~~~~~~ 555 (994)
T PRK07868 492 VGVRQGDRVGVLMETRPSAL--VAIAALSRLGAVAVLMPPD--TDLAAAVRLGGVTEIITDPTNLEAA 555 (994)
T ss_pred cCCCCCCEEEEEcCCCHHHH--HHHHHHHhcCCEEEEeCCc--hhHHHHHhccCCeEEEEChHHHHHH
Confidence 47788999988887665433 3677999999999988752 5677788888888888776655443
No 296
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=28.24 E-value=3.7e+02 Score=23.34 Aligned_cols=47 Identities=6% Similarity=0.053 Sum_probs=33.9
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++.
T Consensus 141 Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 192 (472)
T TIGR03250 141 GVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEA 192 (472)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 6888898988776442 357788999999999764 2 234567777775
No 297
>PRK07787 acyl-CoA synthetase; Validated
Probab=28.15 E-value=2.8e+02 Score=23.59 Aligned_cols=56 Identities=5% Similarity=-0.048 Sum_probs=42.6
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
+.|++...++-. ..+...+++++..|+..+..+ .....++...+++.+++.+...+
T Consensus 44 ~~~~V~l~~~~~--~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~il~~~ 100 (471)
T PRK07787 44 GARRVAVLATPT--LATVLAVVGALIAGVPVVPVPPDSGVAERRHILADSGAQAWLGPA 100 (471)
T ss_pred cCCEEEEECCCC--HHHHHHHHHHHhcCcEEeecCCCCChHHHHHHHHhcCCCEEEecC
Confidence 557776665544 334456789999999998876 46788999999999999888765
No 298
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=27.98 E-value=4.2e+02 Score=23.41 Aligned_cols=47 Identities=9% Similarity=0.037 Sum_probs=30.5
Q ss_pred cEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (236)
-++....|+.+-.-+....+.+.+.|.++++-|. . ....+.+++.+.
T Consensus 172 GVv~~I~PwNfP~~~~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~l~~a 222 (522)
T cd07123 172 GFVYAVSPFNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEEA 222 (522)
T ss_pred ceEEEECCcccHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHc
Confidence 6788888988775554444444446999888763 2 345566777664
No 299
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=27.98 E-value=3.8e+02 Score=22.88 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=34.9
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 96 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~a 150 (431)
T cd07095 96 RPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA 150 (431)
T ss_pred ecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHh
Confidence 4557889999988765442 4577889999999997642 344566666664
No 300
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=27.93 E-value=2.9e+02 Score=23.65 Aligned_cols=49 Identities=20% Similarity=0.070 Sum_probs=33.3
Q ss_pred CCcEEEEecChhhHHh-HHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-.. ....+..+|..|.++++-|.. ....+.+++++.
T Consensus 116 P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~a 169 (452)
T cd07102 116 PLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEA 169 (452)
T ss_pred eccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 3358888888665532 224678899999999997642 234566777765
No 301
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=27.92 E-value=4.1e+02 Score=23.17 Aligned_cols=49 Identities=12% Similarity=0.004 Sum_probs=34.5
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 134 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~a 187 (487)
T PRK09457 134 PHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA 187 (487)
T ss_pred ccEEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 44588889998776533 24577899999999997642 344566777765
No 302
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=27.87 E-value=2.5e+02 Score=25.68 Aligned_cols=60 Identities=12% Similarity=0.095 Sum_probs=46.6
Q ss_pred CCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
..++|++...+|-....- ..+++++..|+..+... ...++++...+++.++..++.....
T Consensus 252 ~~~gd~Val~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~ 312 (718)
T PRK08043 252 SVEGERIGLMLPNATISA--AVIFGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQF 312 (718)
T ss_pred cCCCceEEEEcCCcHHHH--HHHHHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHH
Confidence 478899988888776543 46778889998887765 4678899999999999888876554
No 303
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=27.51 E-value=3.3e+02 Score=23.66 Aligned_cols=48 Identities=10% Similarity=-0.034 Sum_probs=31.0
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC-C---HHHHHHHHH
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF-D---LEMFLRAIE 58 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~ 58 (236)
.|=-+++...|+++-..+. ..+..+|..|.++++-|.. . ...+.++++
T Consensus 128 ~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~ 180 (465)
T PRK15398 128 APFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN 180 (465)
T ss_pred cccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence 4456888888885443332 3567899999999997743 2 334555554
No 304
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=27.45 E-value=3.1e+02 Score=23.51 Aligned_cols=49 Identities=14% Similarity=-0.019 Sum_probs=34.0
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++.+.
T Consensus 119 P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~a 172 (451)
T cd07150 119 PLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA 172 (451)
T ss_pred cccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHh
Confidence 33588889997776543 24578999999999997642 344566677664
No 305
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=27.33 E-value=2.8e+02 Score=23.89 Aligned_cols=48 Identities=10% Similarity=0.058 Sum_probs=32.1
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC-C---HHHHHHHHHh
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF-D---LEMFLRAIEK 59 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~ 59 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. . ...+.+++++
T Consensus 116 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ 168 (456)
T cd07107 116 PYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELARE 168 (456)
T ss_pred cceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 345888899987655432 3577899999999997742 2 3344555544
No 306
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=27.13 E-value=2.3e+02 Score=28.35 Aligned_cols=59 Identities=12% Similarity=0.018 Sum_probs=46.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 68 (236)
.++.++|++...++-....- ..+++++..|+..+..+ ...++++..+++..++..++..
T Consensus 290 ~gv~~g~~V~i~~~~~~~~i--~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 290 TGIKRGDVVMIYAYRGVDLV--VAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred hCCCCCCEEEEEecCCHHHH--HHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEe
Confidence 46788898888888665543 47789999999999876 4678888889999888877654
No 307
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=26.91 E-value=2.9e+02 Score=24.01 Aligned_cols=48 Identities=13% Similarity=-0.019 Sum_probs=33.9
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 142 ~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a 194 (476)
T cd07142 142 IGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEA 194 (476)
T ss_pred eeeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHc
Confidence 35888899988766543 3567899999999997642 234566677665
No 308
>PRK06145 acyl-CoA synthetase; Validated
Probab=26.79 E-value=3.3e+02 Score=23.26 Aligned_cols=61 Identities=5% Similarity=-0.013 Sum_probs=44.7
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.+..+++++...++-.-. +...+++++..|+..+..+ ......+...++..++..++..+.
T Consensus 47 ~g~~~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~ 108 (497)
T PRK06145 47 RGIGQGDVVALLMKNSAA--FLELAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEE 108 (497)
T ss_pred cCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccc
Confidence 356778888777765543 3346778899998888765 467888888999888888776543
No 309
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=26.68 E-value=3.8e+02 Score=23.32 Aligned_cols=50 Identities=12% Similarity=-0.012 Sum_probs=34.3
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR 61 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~ 61 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+..
T Consensus 135 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aG 189 (488)
T TIGR02299 135 PVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAG 189 (488)
T ss_pred ecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcC
Confidence 446788888887765542 3467889999999997642 2445667777653
No 310
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=26.49 E-value=59 Score=18.13 Aligned_cols=22 Identities=23% Similarity=0.172 Sum_probs=18.4
Q ss_pred EEeecCCCCCHHHHHHHHHhCC
Q 026609 91 LVGSGAAPLGKELMEECAKNVP 112 (236)
Q Consensus 91 ~i~~~G~~~~~~~~~~~~~~~~ 112 (236)
.+-++|.|++.++.+.++..|+
T Consensus 23 wvSf~GrPltdevK~a~k~i~~ 44 (49)
T PF06543_consen 23 WVSFDGRPLTDEVKEAMKLIFG 44 (49)
T ss_pred heeeCCeeCCHHHHHHHHHHHh
Confidence 4667899999999998888876
No 311
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=26.26 E-value=4.2e+02 Score=23.27 Aligned_cols=68 Identities=18% Similarity=0.209 Sum_probs=42.6
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP----PLILALAKH 78 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~ 78 (236)
.+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++.+. ....+..++ .....|+.+
T Consensus 159 ~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~ 237 (500)
T TIGR01238 159 ESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSD 237 (500)
T ss_pred cCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcC
Confidence 455788999998886654 24577899999999997742 234456666664 333343333 344445543
No 312
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=26.22 E-value=3.9e+02 Score=23.05 Aligned_cols=50 Identities=14% Similarity=0.054 Sum_probs=34.8
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..+|..|.++++-|+. ....+.+++++.
T Consensus 122 ~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~a 176 (457)
T PRK09406 122 QPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176 (457)
T ss_pred ecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHh
Confidence 4447888889987665543 2467889999999997642 344567777775
No 313
>PRK07638 acyl-CoA synthetase; Validated
Probab=26.08 E-value=3.2e+02 Score=23.34 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=42.3
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.+|++...++-... +...+++++..|+..+..+ ...++.+.+.+++.+++.++...
T Consensus 49 ~~~~v~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~ 105 (487)
T PRK07638 49 KNKTIAILLENRIE--FLQLFAGAAMAGWTCVPLDIKWKQDELKERLAISNADMIVTER 105 (487)
T ss_pred CCCEEEEEcCCCHH--HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEec
Confidence 55666666655433 3357789999999999876 46788999999999999887665
No 314
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=25.85 E-value=3.3e+02 Score=23.41 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=26.6
Q ss_pred CcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCC
Q 026609 13 DYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK 47 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~ 47 (236)
--+++...|+.+-..... .+..+|..|.++++-|.
T Consensus 96 ~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps 131 (436)
T cd07122 96 VGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPH 131 (436)
T ss_pred ccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECC
Confidence 357888888877655533 47799999999999774
No 315
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=25.71 E-value=3.1e+02 Score=23.79 Aligned_cols=49 Identities=10% Similarity=-0.038 Sum_probs=34.5
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|+. ....+.+++.+.
T Consensus 139 P~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~a 192 (481)
T TIGR03216 139 PLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAV 192 (481)
T ss_pred ccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence 345888888888776552 3467889999999997642 345667777764
No 316
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=25.63 E-value=3.9e+02 Score=23.14 Aligned_cols=47 Identities=13% Similarity=0.063 Sum_probs=31.2
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-CC---HHHHHHHHHh
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-FD---LEMFLRAIEK 59 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~ 59 (236)
--+++...|+.+-..+. ..+..+|..|.++++-|. .. ...+.+++.+
T Consensus 139 ~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~ 190 (475)
T PRK13473 139 VGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAAD 190 (475)
T ss_pred ceeEEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 35888889988766552 245689999999999764 22 3344555544
No 317
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=25.51 E-value=3.4e+02 Score=21.46 Aligned_cols=82 Identities=12% Similarity=0.143 Sum_probs=48.0
Q ss_pred HHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceEEeecCCC-CCHHHHHHHHHh
Q 026609 32 TCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKN 110 (236)
Q Consensus 32 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~-~~~~~~~~~~~~ 110 (236)
-+..++..+.++++++...-...+.+-..+...-..-..++..|++....+ ..|..+.||.+ +-....+.+++.
T Consensus 57 e~~~~i~~A~li~pDG~gvV~~ar~~~g~~~~~rv~G~Dl~~~Ll~~a~~~-----~~~vfllGgkp~V~~~a~~~l~~~ 131 (253)
T COG1922 57 EFREILNQADLILPDGIGVVRAARRLLGQPLPERVAGTDLVEALLKRAAEE-----GKRVFLLGGKPGVAEQAAAKLRAK 131 (253)
T ss_pred HHHHHHhhcCEEccCchhHHHHHHHHhCccCcccCChHHHHHHHHHHhCcc-----CceEEEecCCHHHHHHHHHHHHHH
Confidence 456667777777776654444443333333322222234555666554322 46788888876 456677888999
Q ss_pred CCCCceee
Q 026609 111 VPSATVIQ 118 (236)
Q Consensus 111 ~~~~~v~~ 118 (236)
+|+..+.-
T Consensus 132 ~p~l~ivg 139 (253)
T COG1922 132 YPGLKIVG 139 (253)
T ss_pred CCCceEEE
Confidence 98666554
No 318
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=25.49 E-value=4.5e+02 Score=22.85 Aligned_cols=48 Identities=15% Similarity=0.112 Sum_probs=33.3
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++
T Consensus 136 P~GVV~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~ 188 (480)
T cd07559 136 PLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGD 188 (480)
T ss_pred ccceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHH
Confidence 446889999988776653 3467899999999997742 23345555554
No 319
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=25.32 E-value=2.1e+02 Score=18.93 Aligned_cols=45 Identities=20% Similarity=0.315 Sum_probs=31.7
Q ss_pred hhhHHhHHHHHHHHhhc-CcEEEEcC-CCCHHHHHHHHHhcCceEEEe
Q 026609 22 LFHVFGLAVITCGQLQK-GSCIILMA-KFDLEMFLRAIEKHRVTHIWV 67 (236)
Q Consensus 22 ~~~~~g~~~~~~~~l~~-G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 67 (236)
..|..|+ ..+...+.. |..+.+.+ ..+.+.+.+.+++.+++.+..
T Consensus 11 ~~~~lGl-~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~i 57 (121)
T PF02310_consen 11 EVHPLGL-LYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGI 57 (121)
T ss_dssp SSTSHHH-HHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEE
T ss_pred cchhHHH-HHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEE
Confidence 4456677 455566654 88887775 456799999999999998665
No 320
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=25.12 E-value=4.2e+02 Score=22.72 Aligned_cols=48 Identities=13% Similarity=-0.016 Sum_probs=33.1
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
--+++...|+.+-... ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 118 ~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~a 170 (455)
T cd07093 118 VGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEA 170 (455)
T ss_pred eeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhc
Confidence 3578888887765443 24567899999999997642 245567777764
No 321
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=25.06 E-value=4.1e+02 Score=23.09 Aligned_cols=49 Identities=14% Similarity=0.124 Sum_probs=33.6
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 144 P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a 197 (484)
T cd07144 144 PYGVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEA 197 (484)
T ss_pred cceEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh
Confidence 34588889997766543 24567899999999997642 234566666654
No 322
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=25.00 E-value=4.7e+02 Score=22.85 Aligned_cols=50 Identities=20% Similarity=0.066 Sum_probs=34.2
Q ss_pred CCCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++.+.
T Consensus 146 ~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 200 (486)
T cd07140 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKA 200 (486)
T ss_pred eccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHc
Confidence 344688888998876543 34577889999999997642 234556666554
No 323
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=24.87 E-value=4.3e+02 Score=23.48 Aligned_cols=49 Identities=12% Similarity=-0.042 Sum_probs=34.2
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--++....|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 195 P~GVV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~ea 248 (538)
T PLN02466 195 PIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEA 248 (538)
T ss_pred cceEEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhc
Confidence 346788889988765552 3467899999999997642 244566666664
No 324
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=24.71 E-value=5e+02 Score=23.06 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=37.7
Q ss_pred cEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP----PLILALAKH 78 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~ 78 (236)
-+++...|+.+-..+......+.+.|.++++-|.. ....+.+++.+. ....+..++ .....|+.+
T Consensus 172 GVv~~I~PwN~P~~~~~~~~a~ALaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~~ 246 (533)
T TIGR01236 172 GFVYAISPFNFTAIAGNLPGAPALMGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLAD 246 (533)
T ss_pred CEEEEEeCCchHHHHHHHHHHHHHhCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhcC
Confidence 67888888877655534333333379999987642 345567777664 333343333 234455554
No 325
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=24.69 E-value=4.5e+02 Score=22.73 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=33.9
Q ss_pred CCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCC-CC---HHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK-FD---LEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~~ 60 (236)
.+=-+++...|+.+-..+.. .+..+|..|.++++-|. .. ...+.+++.+.
T Consensus 125 ~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~a 179 (462)
T PRK13968 125 RPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDA 179 (462)
T ss_pred eccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHc
Confidence 34468888889876654433 47789999999999664 22 34456666664
No 326
>PF14617 CMS1: U3-containing 90S pre-ribosomal complex subunit
Probab=24.35 E-value=3e+02 Score=21.76 Aligned_cols=49 Identities=24% Similarity=0.215 Sum_probs=37.7
Q ss_pred CHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCCCceEEeecCCCCC
Q 026609 49 DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLG 100 (236)
Q Consensus 49 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~ 100 (236)
-.+.-++.++..++.+..++|.=+..|++. ....+..++.+++-..-++
T Consensus 165 Kl~eqv~~L~~~~~~i~vGTP~Rl~kLle~---~~L~l~~l~~ivlD~s~~D 213 (252)
T PF14617_consen 165 KLEEQVKLLKKTRVHIAVGTPGRLSKLLEN---GALSLSNLKRIVLDWSYLD 213 (252)
T ss_pred cHHHHHHHHHhCCceEEEeChHHHHHHHHc---CCCCcccCeEEEEcCCccc
Confidence 456667778888999999999998888854 4446778899988765443
No 327
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=24.29 E-value=4e+02 Score=24.75 Aligned_cols=78 Identities=17% Similarity=0.083 Sum_probs=46.5
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc-Cce----EEEeC---hHHHHHHHhcC
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH-RVT----HIWVV---PPLILALAKHG 79 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~-~~t----~~~~~---P~~~~~l~~~~ 79 (236)
|=-++....|++ -..+...+..+|..|.++++-|. . ....+.+++++. ... .+..+ +..-..|..+
T Consensus 405 PlGVV~~I~Pwn-P~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eAlP~gv~~~v~nvv~g~~~~g~~L~~~- 482 (718)
T PLN02418 405 PLGVLLIIFESR-PDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITDAIPKTVGGKLIGLVTSRDEIPDLLKLD- 482 (718)
T ss_pred eeeEEEEEeCCC-cHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHHccccCCcceEEEeCCcHHHHHHHhhC-
Confidence 336788888887 33443677899999999999764 2 234456666552 111 13333 2333444433
Q ss_pred CcCCCCCCCceEEeecCCC
Q 026609 80 LVKKFDLSSLKLVGSGAAP 98 (236)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~~ 98 (236)
+.++.+...|..
T Consensus 483 -------~~v~~V~FTGSt 494 (718)
T PLN02418 483 -------DVIDLVIPRGSN 494 (718)
T ss_pred -------CCCCEEEEeCCH
Confidence 346677777766
No 328
>PRK14717 putative glycine/sarcosine/betaine reductase complex protein A; Provisional
Probab=23.90 E-value=1.2e+02 Score=20.00 Aligned_cols=50 Identities=12% Similarity=0.123 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEE
Q 026609 103 LMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEAL 155 (236)
Q Consensus 103 ~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 155 (236)
-++.+.+.++...++. .-|++|+-......... .....+..-|+.|+++.
T Consensus 8 rvk~~aek~g~eNvvV-~lG~aeaEaaglaAETV--t~GDPTfAGPLaGV~Lg 57 (107)
T PRK14717 8 RIKELAEKYGAENIVV-ILGAAEAEAAGLAAETV--TNGDPTFAGPLAGVQLG 57 (107)
T ss_pred HHHHHHHhcCCccEEE-EecCcchhhccceeeee--ccCCCccccccccCccC
Confidence 4567778888777888 89998764433332211 11112333466666654
No 329
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=23.87 E-value=3.3e+02 Score=25.82 Aligned_cols=76 Identities=16% Similarity=0.046 Sum_probs=46.0
Q ss_pred cEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHh------cCceEEEeCh----HHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEK------HRVTHIWVVP----PLILALAKH 78 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~------~~~t~~~~~P----~~~~~l~~~ 78 (236)
-+++...|+.+-..+.. .+..+|..|.++++-|.. ....+.+++++ .....+..++ .....|+++
T Consensus 110 GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~ 189 (862)
T PRK13805 110 GVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNH 189 (862)
T ss_pred eEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcC
Confidence 57788888776654433 677899999999997743 23345555543 3444555444 245556554
Q ss_pred CCcCCCCCCCceEEeecCC
Q 026609 79 GLVKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 79 ~~~~~~~l~~lr~i~~~G~ 97 (236)
+ .++.++..|.
T Consensus 190 ~--------~vd~I~fTGs 200 (862)
T PRK13805 190 P--------GIALILATGG 200 (862)
T ss_pred C--------CccEEEecCC
Confidence 3 2455555553
No 330
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=23.85 E-value=3.9e+02 Score=22.97 Aligned_cols=50 Identities=12% Similarity=0.060 Sum_probs=34.4
Q ss_pred CCCcEEEEecChhhHH-hHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVF-GLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~-g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-. .....+..+|..|.++++-|.. ....+.+++++.
T Consensus 99 ~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~a 153 (442)
T cd07084 99 WPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYA 153 (442)
T ss_pred ecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHh
Confidence 3346888999986644 3334577899999999987642 344567777664
No 331
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=23.74 E-value=4.7e+02 Score=22.47 Aligned_cols=48 Identities=15% Similarity=0.084 Sum_probs=32.5
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (236)
--+++...|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++.
T Consensus 120 ~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~a 172 (457)
T cd07114 120 LGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEA 172 (457)
T ss_pred ceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHc
Confidence 35888888877655442 356788999999999764 2 234556666664
No 332
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=23.54 E-value=4.5e+02 Score=25.61 Aligned_cols=62 Identities=11% Similarity=0.057 Sum_probs=48.0
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHH
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 72 (236)
+..++|++...+|-....-. .+++++..|+..+..+ ....+++...+++.+++.++..+...
T Consensus 678 g~~~gd~V~i~~~n~~~~~~--~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 740 (1140)
T PRK06814 678 NTPPGENVGVMLPNANGAAV--TFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFI 740 (1140)
T ss_pred cCCCCCeEEEEcCCchHHHH--HHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHH
Confidence 56788888888776665444 6788999998877665 56789999999999999988766543
No 333
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=23.36 E-value=3.9e+02 Score=21.82 Aligned_cols=72 Identities=24% Similarity=0.246 Sum_probs=42.6
Q ss_pred CCCceEEeecCCCCC--HHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCC
Q 026609 86 LSSLKLVGSGAAPLG--KELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 162 (236)
Q Consensus 86 l~~lr~i~~~G~~~~--~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~ 162 (236)
+.++=.-+++++.-+ ..+.+++++.||+ +..|.|=++|+-+......+ ....+.+-.+--|...+++++|+-
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fps--~ae~~~v~sDa~~sl~a~t~---g~~~GiVLiaGTgs~crl~~~DGs 141 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFPS--VAENFYVTSDADGSLAAATP---GGEGGIVLIAGTGSNCRLVNPDGS 141 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhccc--hhheeeeehhHHHHHhhcCC---CCCCcEEEEecCCceeEEECCCCC
Confidence 344444555665433 5688999999984 34558999998554443222 112334444555667777875433
No 334
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=23.24 E-value=3.7e+02 Score=23.06 Aligned_cols=49 Identities=12% Similarity=0.043 Sum_probs=33.9
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 117 P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a 170 (453)
T cd07115 117 PVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEA 170 (453)
T ss_pred ceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 345888888888665542 3467889999999997642 344566777664
No 335
>PF12101 DUF3577: Protein of unknown function (DUF3577); InterPro: IPR021960 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 143 to 307 amino acids in length.
Probab=23.16 E-value=83 Score=22.16 Aligned_cols=22 Identities=23% Similarity=0.119 Sum_probs=17.6
Q ss_pred EEEEcccC--CceeeccEEeecCC
Q 026609 215 LYVVDRIK--ELIKYKGFQVTSNW 236 (236)
Q Consensus 215 ~~~~GR~~--d~i~~~G~~i~p~~ 236 (236)
..+.||.= ++||++|+.|++.|
T Consensus 107 ~sLKgRLl~i~~iKVdge~Vy~~~ 130 (137)
T PF12101_consen 107 ASLKGRLLKIKWIKVDGELVYKAE 130 (137)
T ss_pred eeeEEEEEEEEEEEECCEEEecCC
Confidence 66777763 68999999999875
No 336
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=22.76 E-value=4.2e+02 Score=23.11 Aligned_cols=49 Identities=10% Similarity=-0.010 Sum_probs=34.4
Q ss_pred CCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--++....|+.+-..+.. .+..+|..|.++++-|.. ....+.+++++.
T Consensus 146 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 199 (482)
T PRK11241 146 PIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRA 199 (482)
T ss_pred eceEEEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 3368899999888766633 467888999999997742 234456666664
No 337
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=22.43 E-value=5.2e+02 Score=22.46 Aligned_cols=49 Identities=14% Similarity=0.130 Sum_probs=32.2
Q ss_pred CCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 026609 11 ELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (236)
.+--++....|+.+-..+.. .+..+|..|.++++-|.. ....+.+++.+
T Consensus 136 ~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~ 189 (472)
T TIGR03374 136 DPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD 189 (472)
T ss_pred ecceEEEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHH
Confidence 33458888999887655533 366889999999997642 23344555543
No 338
>PHA00736 hypothetical protein
Probab=22.40 E-value=24 Score=21.07 Aligned_cols=25 Identities=28% Similarity=0.351 Sum_probs=17.2
Q ss_pred EEEecChhhHHhHHHHHHHHhhcCc
Q 026609 16 FLCVLPLFHVFGLAVITCGQLQKGS 40 (236)
Q Consensus 16 ~l~~~p~~~~~g~~~~~~~~l~~G~ 40 (236)
++.++|+||.....+.+.+.+..|.
T Consensus 51 fmdflplfwgi~vifgliag~vlgg 75 (79)
T PHA00736 51 FMDFLPLFWGITVIFGLIAGLVLGG 75 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC
Confidence 4557889998887776666665543
No 339
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=22.05 E-value=4.7e+02 Score=22.69 Aligned_cols=49 Identities=6% Similarity=-0.086 Sum_probs=33.9
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 133 P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 186 (478)
T cd07086 133 PLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEV 186 (478)
T ss_pred cceeEEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHh
Confidence 335889999977654332 3578999999999997642 234566666664
No 340
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=21.91 E-value=3.9e+02 Score=23.58 Aligned_cols=57 Identities=11% Similarity=-0.058 Sum_probs=37.5
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc---CceEEEeCh
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH---RVTHIWVVP 69 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~---~~t~~~~~P 69 (236)
--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++.+. ....+..++
T Consensus 145 ~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~ 209 (513)
T cd07128 145 RGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLIC 209 (513)
T ss_pred ccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEec
Confidence 3677888887764433 24578999999999997642 345667777774 434455454
No 341
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=21.59 E-value=3.7e+02 Score=20.50 Aligned_cols=80 Identities=16% Similarity=0.234 Sum_probs=46.2
Q ss_pred HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEE--EeChHHHHHHHhcCCcCCCCCCCceEEeecCCCCCHHHHHHHH
Q 026609 31 ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHI--WVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECA 108 (236)
Q Consensus 31 ~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~--~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~ 108 (236)
..-.++-.|+..++.|.+++ .+.+...++.+.++ .++|+-.....+... .-+|. +=++....++.++.++
T Consensus 79 ~a~~a~~aGA~FivsP~~~~-~vi~~a~~~~i~~iPG~~TptEi~~a~~~Ga------~~vKl-FPa~~~gg~~~lk~l~ 150 (212)
T PRK05718 79 QLAQAIEAGAQFIVSPGLTP-PLLKAAQEGPIPLIPGVSTPSELMLGMELGL------RTFKF-FPAEASGGVKMLKALA 150 (212)
T ss_pred HHHHHHHcCCCEEECCCCCH-HHHHHHHHcCCCEeCCCCCHHHHHHHHHCCC------CEEEE-ccchhccCHHHHHHHh
Confidence 34467788999999888888 66677777887776 456666555544321 11222 1111111455566666
Q ss_pred HhCCCCceee
Q 026609 109 KNVPSATVIQ 118 (236)
Q Consensus 109 ~~~~~~~v~~ 118 (236)
.-||..++..
T Consensus 151 ~p~p~~~~~p 160 (212)
T PRK05718 151 GPFPDVRFCP 160 (212)
T ss_pred ccCCCCeEEE
Confidence 6665444433
No 342
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=21.58 E-value=4.2e+02 Score=21.04 Aligned_cols=74 Identities=12% Similarity=0.218 Sum_probs=38.9
Q ss_pred HhhcCcEEEEcCC-------------CC--HHHHHHHHHhcCceEEEeChHHHHHHHhcCCc-CCCCCC--CceEEeecC
Q 026609 35 QLQKGSCIILMAK-------------FD--LEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-KKFDLS--SLKLVGSGA 96 (236)
Q Consensus 35 ~l~~G~~~~~~~~-------------~~--~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~l~--~lr~i~~~G 96 (236)
|+..|.++.++.+ .+ ...+|+.+++.+++ |..+..+++..+. ....|+ +++.+.
T Consensus 84 AVA~G~~vyiYkNlkP~yKftlP~~~~~~~E~eiW~~~~~~~i~-----~~~l~~~L~~lr~~~~~~LS~rSl~~L~--- 155 (257)
T PF14779_consen 84 AVAAGPSVYIYKNLKPFYKFTLPPLEINPLEQEIWQQLREGKID-----PETLKEMLESLRDIAGVKLSPRSLRFLQ--- 155 (257)
T ss_pred EEEeCCEEEEEecccceeeecCCCCCCCHHHHHHHHhcccCCCC-----HHHHHHHHHHHhhccCCccCHHHHHHHC---
Confidence 4567777777542 13 34678888777765 3344444443322 233444 444442
Q ss_pred CCCCHHHHHHHHHhCCCCceee
Q 026609 97 APLGKELMEECAKNVPSATVIQ 118 (236)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~v~~ 118 (236)
++++..+.|.+.+.+.++..
T Consensus 156 --l~~ee~~~fi~~~k~~pl~~ 175 (257)
T PF14779_consen 156 --LDPEEREAFIERYKDSPLKR 175 (257)
T ss_pred --CCHHHHHHHHHHHhcCCccc
Confidence 34566666666654344444
No 343
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=21.54 E-value=5.5e+02 Score=22.45 Aligned_cols=50 Identities=16% Similarity=0.061 Sum_probs=33.9
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
.+--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++++.
T Consensus 156 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 210 (494)
T PRK09847 156 EPVGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA 210 (494)
T ss_pred cceeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHc
Confidence 3446889999987665542 3466799999999997642 234566666664
No 344
>PF08789 PBCV_basic_adap: PBCV-specific basic adaptor domain; InterPro: IPR014897 The small PBCV-specific basic adaptor protein is found fused to S/T protein kinases and the 2-Cysteine domain [].
Probab=21.49 E-value=1.5e+02 Score=15.97 Aligned_cols=26 Identities=15% Similarity=0.056 Sum_probs=13.0
Q ss_pred EcCCCcEEEEcccCCceee--ccEEeec
Q 026609 209 FDGDGQLYVVDRIKELIKY--KGFQVTS 234 (236)
Q Consensus 209 ~~~~g~~~~~GR~~d~i~~--~G~~i~p 234 (236)
.|..|...+.|-......+ +|.+|++
T Consensus 4 vdakgR~i~~g~rGg~yV~~~~GKKvyv 31 (40)
T PF08789_consen 4 VDAKGRKIFKGPRGGTYVISDGGKKVYV 31 (40)
T ss_pred ccCcCCEEEECCCCCEEEeCCCCcEEee
Confidence 4445556666644433333 3466654
No 345
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=21.43 E-value=1.9e+02 Score=22.09 Aligned_cols=36 Identities=14% Similarity=0.062 Sum_probs=28.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM 45 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 45 (236)
.+++++|++...+|-...+-. .+++++..|+.++..
T Consensus 48 ~Gv~~GdrV~i~~~n~~~~~~--~~~a~~~~G~v~vp~ 83 (227)
T TIGR03089 48 LDAEPGSRVALDLPAHWQTAV--WLLAAWSTGVEVVLA 83 (227)
T ss_pred hCCCCCCEEEEECCCCHHHHH--HHHHHHHcCCEEEeC
Confidence 578899999999987655444 667889999998876
No 346
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=21.33 E-value=3.3e+02 Score=23.33 Aligned_cols=48 Identities=13% Similarity=0.062 Sum_probs=33.0
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
--+++...|+.+-... ...+..+|..|.++++-|.. ....+.+++++.
T Consensus 118 ~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~a 170 (451)
T cd07103 118 VGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEA 170 (451)
T ss_pred ceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHc
Confidence 3578888887665433 24578899999999997642 245567777764
No 347
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=21.28 E-value=5.1e+02 Score=22.20 Aligned_cols=48 Identities=10% Similarity=-0.020 Sum_probs=30.5
Q ss_pred CCCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHH
Q 026609 11 ELDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIE 58 (236)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~ 58 (236)
.|=-+++...|+.+-.... ..+..+|..|.++++-|.. ....+.++++
T Consensus 96 ~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~ 148 (429)
T cd07121 96 APFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELIN 148 (429)
T ss_pred cccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHH
Confidence 3446788888875443332 3567899999999997742 2334455553
No 348
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=21.17 E-value=5.4e+02 Score=22.20 Aligned_cols=48 Identities=10% Similarity=-0.008 Sum_probs=33.1
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
--+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.
T Consensus 134 ~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~a 186 (467)
T TIGR01804 134 LGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEA 186 (467)
T ss_pred eeEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHc
Confidence 35788888888665542 2457889999999997642 344566677664
No 349
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=21.14 E-value=5.1e+02 Score=22.40 Aligned_cols=49 Identities=14% Similarity=0.013 Sum_probs=33.5
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|+. ....+.+++++.
T Consensus 141 P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~a 194 (473)
T cd07082 141 PLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDA 194 (473)
T ss_pred cceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHc
Confidence 34577888887776543 24568899999999997642 345566777663
No 350
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=21.08 E-value=3.8e+02 Score=24.59 Aligned_cols=57 Identities=7% Similarity=-0.109 Sum_probs=37.5
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc---CceEEEeChH
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH---RVTHIWVVPP 70 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~---~~t~~~~~P~ 70 (236)
-+++...|+++-..+. ..+..+|..|.++++-|. . ....+.+++.+. ....+..++.
T Consensus 146 Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g 210 (663)
T TIGR02278 146 GVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICG 210 (663)
T ss_pred ceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeC
Confidence 6788888887665432 457899999999998764 2 244566777774 3334554443
No 351
>TIGR00550 nadA quinolinate synthetase complex, A subunit. This protein, termed NadA, plays a role in the synthesis of pyridine, a precursor to NAD. The quinolinate synthetase complex consists of A protein (this protein) and B protein. B protein converts L-aspartate to iminoaspartate, an unstable reaction product which in the absence of A protein is spontaneously hydrolyzed to form oxaloacetate. The A protein, NadA, converts iminoaspartate to quinolate.
Probab=20.81 E-value=3.8e+02 Score=21.92 Aligned_cols=77 Identities=18% Similarity=0.015 Sum_probs=49.8
Q ss_pred CHHHHHHHHHhcCceEEEeChH-HHHHHHhc-CCcCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccc
Q 026609 49 DLEMFLRAIEKHRVTHIWVVPP-LILALAKH-GLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTE 125 (236)
Q Consensus 49 ~~~~~~~~i~~~~~t~~~~~P~-~~~~l~~~-~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE 125 (236)
|..++.+..++.....+.+.|- .+-.-++. ...+..-+|.+..-+.--+.++++.++.+++..|++.++.+.|-+.|
T Consensus 40 dS~~l~~~a~~~~~~~IvF~gv~fMae~a~~l~p~k~vilp~~~a~C~~a~~~~~~~i~~lk~~~Pda~vvah~n~~ae 118 (310)
T TIGR00550 40 DSLELAQIAAKTDADIIVFCGVHFMGETAKILNPEKTVLMPDLGAGCSMADMCPPEEFKKLKERHPDAFVVTYVNTTAE 118 (310)
T ss_pred eHHHHHHHHHhCCCCEEEEeCCchHHHHHHHhCCCCEEEccCCCCCCccccccCHHHHHHHHHHCCCCEEEEECCCCHH
Confidence 5566777777677775555553 33333332 22233445566667777789999999999999988887774554444
No 352
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=20.80 E-value=4.6e+02 Score=22.23 Aligned_cols=45 Identities=16% Similarity=0.053 Sum_probs=28.6
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHH
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAI 57 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i 57 (236)
+=-+++...|+.....+ ..+..+|..|.++++-|.. ....+.+++
T Consensus 103 PlGVV~~I~pw~p~~~~-~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~ 151 (398)
T TIGR00407 103 PLGVLGVIYEARPNVTV-DIASLCLKTGNAVILRGGKEAVRSNKALVEVI 151 (398)
T ss_pred CcEEEEEEeCCCchHHH-HHHHHHHHhCCeEEECCChhhHHHHHHHHHHH
Confidence 33567777886443333 4567789999999997743 233455553
No 353
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=20.69 E-value=3.7e+02 Score=23.19 Aligned_cols=76 Identities=18% Similarity=0.131 Sum_probs=43.0
Q ss_pred cEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHh--cC---ceEEEe-ChHHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-F---DLEMFLRAIEK--HR---VTHIWV-VPPLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~--~~---~t~~~~-~P~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-... ...+..+|..|.++++-|. . ....+.+++++ .. +.++.+ .......|+.++
T Consensus 128 GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~--- 204 (462)
T PF00171_consen 128 GVVLIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHP--- 204 (462)
T ss_dssp SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTT---
T ss_pred cceeecccccccccccccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeecc---
Confidence 477777776655444 2346788999999999653 2 34556666666 22 233333 234556666543
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 205 -----~v~~v~ftGs 214 (462)
T PF00171_consen 205 -----DVDLVSFTGS 214 (462)
T ss_dssp -----TEEEEEEESE
T ss_pred -----ccceeeecch
Confidence 3556655553
No 354
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=20.62 E-value=6.4e+02 Score=22.84 Aligned_cols=94 Identities=10% Similarity=0.025 Sum_probs=62.8
Q ss_pred ccCCCCcE-EEEecChhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 8 TAGELDYV-FLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 8 ~~~~~~d~-~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
+++++++. +..+++-.+- .+ ..+++|+..+-++|-. ..+-.+.+...+.+..++.++..+.++..|..-. ..
T Consensus 109 lG~k~~e~k~~iFa~Trae-Wm-~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l----~~ 182 (678)
T KOG1180|consen 109 LGLKPKETKIAIFAETRAE-WM-ITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPL----KQ 182 (678)
T ss_pred hCCCCCCCeEEEEecchHH-HH-HHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHH----hc
Confidence 45665543 4444444333 11 4567899999998875 4566788999999999999999999988665432 24
Q ss_pred CCCceEEeecCC---CCCHHHHHHH
Q 026609 86 LSSLKLVGSGAA---PLGKELMEEC 107 (236)
Q Consensus 86 l~~lr~i~~~G~---~~~~~~~~~~ 107 (236)
.+.+|.|+..-. ....+.++.+
T Consensus 183 ~~~vk~II~~d~id~~~~~~~v~~i 207 (678)
T KOG1180|consen 183 AKTVKHIIYFDPIDYDAAKDDVNSI 207 (678)
T ss_pred cCceeEEEEecCCCCccchhhhhhh
Confidence 567888887653 3444444444
No 355
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=20.62 E-value=5.4e+02 Score=22.01 Aligned_cols=48 Identities=15% Similarity=0.011 Sum_probs=32.1
Q ss_pred CCcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHh
Q 026609 12 LDYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~ 59 (236)
+--+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++
T Consensus 114 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~ 166 (446)
T cd07106 114 PLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQE 166 (446)
T ss_pred cceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHH
Confidence 34588888887766543 23467899999999997642 23445555555
No 356
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=20.10 E-value=5.6e+02 Score=21.99 Aligned_cols=48 Identities=6% Similarity=-0.038 Sum_probs=33.5
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~ 60 (236)
--+++...|+.+-... ...+..+|..|.++++-|.. ....+.+++.+.
T Consensus 117 ~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~a 169 (457)
T cd07090 117 LGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEA 169 (457)
T ss_pred cceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHc
Confidence 3678888888776544 23567899999999997642 344566777664
Done!