Query 026609
Match_columns 236
No_of_seqs 122 out of 1705
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 17:41:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026609.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026609hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 2.2E-44 7.6E-49 309.0 21.4 229 7-236 217-448 (536)
2 3rix_A Luciferase, luciferin 4 100.0 1.1E-43 3.8E-48 305.5 21.7 225 8-236 229-453 (550)
3 2d1s_A Luciferase, luciferin 4 100.0 1.9E-43 6.5E-48 303.9 21.5 225 8-236 231-455 (548)
4 4fuq_A Malonyl COA synthetase; 100.0 2.8E-43 9.6E-48 300.0 17.6 226 5-236 188-413 (503)
5 1mdb_A 2,3-dihydroxybenzoate-A 100.0 4.7E-43 1.6E-47 300.9 13.8 227 6-236 216-444 (539)
6 1pg4_A Acetyl-COA synthetase; 100.0 4.2E-42 1.4E-46 300.8 18.3 229 6-236 291-531 (652)
7 3tsy_A Fusion protein 4-coumar 100.0 1.1E-41 3.9E-46 310.0 20.9 229 7-236 264-495 (979)
8 3etc_A AMP-binding protein; ad 100.0 2E-41 6.7E-46 293.0 20.1 223 7-236 260-489 (580)
9 3o83_A Peptide arylation enzym 100.0 1.4E-42 4.7E-47 298.3 12.7 228 5-236 224-453 (544)
10 3g7s_A Long-chain-fatty-acid-- 100.0 1E-41 3.4E-46 293.3 17.1 229 5-236 213-453 (549)
11 3c5e_A Acyl-coenzyme A synthet 100.0 3.8E-41 1.3E-45 290.7 19.5 224 6-236 240-470 (570)
12 1v25_A Long-chain-fatty-acid-C 100.0 1.7E-41 5.7E-46 291.4 17.1 226 6-236 212-449 (541)
13 3r44_A Fatty acyl COA syntheta 100.0 1.6E-41 5.5E-46 290.1 16.7 225 5-236 203-427 (517)
14 3fce_A D-alanine--poly(phospho 100.0 2.6E-41 8.8E-46 288.5 16.5 227 6-236 178-413 (512)
15 3e7w_A D-alanine--poly(phospho 100.0 7.7E-41 2.6E-45 285.5 19.1 228 5-236 176-412 (511)
16 1t5h_X 4-chlorobenzoyl COA lig 100.0 5.9E-41 2E-45 285.8 17.9 221 7-236 188-416 (504)
17 1ry2_A Acetyl-coenzyme A synth 100.0 2.4E-41 8.2E-46 296.4 15.8 230 6-236 297-540 (663)
18 2v7b_A Benzoate-coenzyme A lig 100.0 9.2E-41 3.1E-45 286.1 18.4 225 6-236 218-443 (529)
19 4gr5_A Non-ribosomal peptide s 100.0 1.4E-40 4.9E-45 287.2 19.2 225 6-236 247-483 (570)
20 4dg8_A PA1221; ANL superfamily 100.0 1.7E-40 5.9E-45 288.8 19.5 226 6-236 197-433 (620)
21 3nyq_A Malonyl-COA ligase; A/B 100.0 5.4E-41 1.9E-45 286.0 12.7 226 5-236 188-420 (505)
22 3rg2_A Enterobactin synthase c 100.0 1.9E-40 6.6E-45 288.8 16.3 227 6-236 218-448 (617)
23 3l8c_A D-alanine--poly(phospho 100.0 3.7E-40 1.3E-44 281.9 16.8 226 8-236 183-417 (521)
24 3ipl_A 2-succinylbenzoate--COA 100.0 2.2E-39 7.5E-44 275.9 16.7 217 5-236 196-412 (501)
25 1amu_A GRSA, gramicidin synthe 100.0 2E-39 6.9E-44 279.5 16.1 219 6-236 216-444 (563)
26 3ivr_A Putative long-chain-fat 100.0 3.5E-39 1.2E-43 275.1 16.0 220 5-236 193-414 (509)
27 3kxw_A Saframycin MX1 syntheta 100.0 4.4E-40 1.5E-44 285.3 9.3 228 5-236 200-472 (590)
28 3gqw_A Fatty acid AMP ligase; 100.0 1.3E-38 4.4E-43 275.3 14.9 225 8-236 213-475 (576)
29 3ite_A SIDN siderophore synthe 100.0 4.2E-38 1.4E-42 271.5 16.8 220 8-236 219-441 (562)
30 2vsq_A Surfactin synthetase su 100.0 7E-38 2.4E-42 291.8 18.0 227 4-236 638-875 (1304)
31 3t5a_A Long-chain-fatty-acid-- 100.0 1.2E-36 4E-41 257.7 12.7 204 13-220 230-480 (480)
32 3qov_A Phenylacetate-coenzyme 100.0 2E-35 6.9E-40 247.4 16.5 210 8-236 125-345 (436)
33 2y27_A Phenylacetate-coenzyme 100.0 2.6E-34 9E-39 240.7 16.0 209 7-236 128-347 (437)
34 2y4o_A Phenylacetate-coenzyme 100.0 3.3E-34 1.1E-38 240.5 15.9 210 7-236 130-349 (443)
35 4gs5_A Acyl-COA synthetase (AM 100.0 1E-33 3.5E-38 231.2 11.5 195 5-236 70-264 (358)
36 3hgu_A EHPF; phenazine, antibi 99.9 3.2E-27 1.1E-31 193.6 13.3 201 6-230 128-368 (369)
37 4eql_A 4-substituted benzoates 98.6 4.6E-08 1.6E-12 83.5 6.1 128 86-235 296-438 (581)
38 4b2g_A GH3-1 auxin conjugating 98.6 3.4E-08 1.2E-12 84.5 5.2 127 86-236 301-451 (609)
39 4epl_A Jasmonic acid-amido syn 98.5 1.7E-07 5.7E-12 79.9 6.5 128 85-235 300-445 (581)
40 3ivr_A Putative long-chain-fat 79.0 12 0.0004 31.2 9.1 65 8-74 51-116 (509)
41 3g7s_A Long-chain-fatty-acid-- 77.6 9.9 0.00034 32.1 8.3 66 8-75 72-138 (549)
42 1v25_A Long-chain-fatty-acid-C 77.4 8.1 0.00028 32.5 7.7 66 8-75 67-133 (541)
43 2v7b_A Benzoate-coenzyme A lig 75.7 7.9 0.00027 32.4 7.1 64 8-73 68-132 (529)
44 3ni2_A 4-coumarate:COA ligase; 75.1 8.6 0.00029 32.3 7.2 64 8-73 69-133 (536)
45 3c5e_A Acyl-coenzyme A synthet 74.9 9.4 0.00032 32.5 7.5 65 9-75 95-160 (570)
46 3rix_A Luciferase, luciferin 4 73.9 10 0.00034 32.0 7.3 66 8-75 70-136 (550)
47 3r44_A Fatty acyl COA syntheta 73.1 12 0.0004 31.3 7.5 62 8-71 63-125 (517)
48 2d1s_A Luciferase, luciferin 4 71.7 10 0.00035 32.0 6.9 64 8-73 72-136 (548)
49 1ry2_A Acetyl-coenzyme A synth 71.3 9.1 0.00031 33.3 6.6 62 7-70 133-195 (663)
50 4fuq_A Malonyl COA synthetase; 69.7 17 0.00057 30.3 7.7 61 8-70 48-109 (503)
51 1t5h_X 4-chlorobenzoyl COA lig 69.1 15 0.00051 30.5 7.3 66 8-75 49-117 (504)
52 1amu_A GRSA, gramicidin synthe 68.3 19 0.00065 30.5 7.9 64 8-73 84-148 (563)
53 3ezx_A MMCP 1, monomethylamine 67.9 33 0.0011 25.1 9.0 89 15-105 94-193 (215)
54 3etc_A AMP-binding protein; ad 67.6 12 0.00043 31.8 6.6 60 8-69 106-166 (580)
55 1pg4_A Acetyl-COA synthetase; 66.8 13 0.00045 32.2 6.7 60 8-69 127-187 (652)
56 4gr5_A Non-ribosomal peptide s 64.4 19 0.00065 30.5 7.1 61 8-70 120-181 (570)
57 3o83_A Peptide arylation enzym 61.7 18 0.00063 30.4 6.5 60 8-69 75-135 (544)
58 3l8c_A D-alanine--poly(phospho 59.6 18 0.00061 30.2 6.0 60 8-69 49-109 (521)
59 1mdb_A 2,3-dihydroxybenzoate-A 59.5 28 0.00094 29.2 7.2 60 8-69 70-130 (539)
60 3ipl_A 2-succinylbenzoate--COA 58.0 25 0.00085 29.1 6.6 56 12-69 47-103 (501)
61 3gqw_A Fatty acid AMP ligase; 57.3 35 0.0012 28.6 7.5 66 8-75 69-142 (576)
62 3kxw_A Saframycin MX1 syntheta 53.7 49 0.0017 27.9 7.8 66 8-75 60-129 (590)
63 3tsy_A Fusion protein 4-coumar 51.4 35 0.0012 31.1 6.9 62 8-71 108-170 (979)
64 3e7w_A D-alanine--poly(phospho 50.9 21 0.00073 29.6 5.1 59 8-68 47-106 (511)
65 3fce_A D-alanine--poly(phospho 49.9 37 0.0013 28.1 6.4 59 8-68 46-105 (512)
66 3rg2_A Enterobactin synthase c 48.5 51 0.0018 28.2 7.2 60 8-69 70-130 (617)
67 3t5a_A Long-chain-fatty-acid-- 47.3 36 0.0012 27.8 5.8 64 12-77 81-148 (480)
68 4dg8_A PA1221; ANL superfamily 46.7 67 0.0023 27.5 7.6 59 8-68 72-131 (620)
69 3ite_A SIDN siderophore synthe 44.4 73 0.0025 26.7 7.4 58 9-69 76-134 (562)
70 3r31_A BADH, betaine aldehyde 42.0 1E+02 0.0034 26.0 7.8 76 14-97 152-237 (517)
71 4e4g_A Methylmalonate-semialde 37.4 95 0.0032 26.1 6.9 77 13-97 163-249 (521)
72 1t90_A MMSDH, probable methylm 35.7 1.2E+02 0.004 25.2 7.2 77 13-97 142-228 (486)
73 2o2p_A Formyltetrahydrofolate 35.1 1E+02 0.0036 25.8 6.8 76 14-97 180-266 (517)
74 3qan_A 1-pyrroline-5-carboxyla 34.3 88 0.003 26.4 6.3 76 14-97 174-260 (538)
75 3nyq_A Malonyl-COA ligase; A/B 34.3 82 0.0028 26.0 6.1 57 12-70 67-124 (505)
76 4f9i_A Proline dehydrogenase/d 34.1 89 0.003 28.9 6.5 78 12-97 666-754 (1026)
77 1uzb_A 1-pyrroline-5-carboxyla 33.1 97 0.0033 26.0 6.3 76 14-97 175-261 (516)
78 1uxt_A Glyceraldehyde-3-phosph 32.3 1E+02 0.0035 25.7 6.3 76 14-97 159-244 (501)
79 2ve5_A BADH, betaine aldehyde 31.9 1.2E+02 0.0041 25.2 6.6 76 14-97 144-230 (490)
80 1wnd_A Putative betaine aldehy 31.9 91 0.0031 26.0 5.9 77 13-97 160-246 (495)
81 1a4s_A ALDH, betaine aldehyde 31.8 1.2E+02 0.0042 25.3 6.7 76 14-97 157-242 (503)
82 2imp_A Lactaldehyde dehydrogen 31.5 1.4E+02 0.0047 24.7 6.9 76 14-97 144-230 (479)
83 3ek1_A Aldehyde dehydrogenase; 31.5 1.2E+02 0.0042 25.3 6.7 66 14-79 170-246 (504)
84 1o04_A Aldehyde dehydrogenase, 31.3 1.2E+02 0.0042 25.3 6.6 77 13-97 159-246 (500)
85 1bxs_A Aldehyde dehydrogenase; 30.4 1.3E+02 0.0045 25.1 6.6 77 13-97 160-247 (501)
86 4e3x_A Delta-1-pyrroline-5-car 30.3 1.3E+02 0.0044 25.6 6.6 88 14-109 202-300 (563)
87 3i44_A Aldehyde dehydrogenase; 30.0 1.5E+02 0.0051 24.7 6.9 78 12-97 161-249 (497)
88 3etf_A Putative succinate-semi 29.7 1.4E+02 0.0047 24.6 6.6 77 13-97 127-213 (462)
89 3ju8_A Succinylglutamic semial 29.7 1.4E+02 0.0049 24.8 6.7 66 13-78 140-215 (490)
90 2vsq_A Surfactin synthetase su 29.7 1.3E+02 0.0046 28.4 7.2 61 8-70 509-570 (1304)
91 3u4j_A NAD-dependent aldehyde 29.3 1.4E+02 0.0049 25.1 6.7 76 14-97 163-249 (528)
92 3b4w_A Aldehyde dehydrogenase; 29.3 1.7E+02 0.0057 24.4 7.1 76 14-97 148-233 (495)
93 3k2w_A Betaine-aldehyde dehydr 29.3 1.7E+02 0.0059 24.3 7.2 77 13-97 149-236 (497)
94 1euh_A NADP dependent non phos 29.1 1.2E+02 0.0043 25.0 6.3 85 14-109 145-240 (475)
95 3my7_A Alcohol dehydrogenase/a 28.6 2.3E+02 0.0079 23.2 7.8 66 14-79 105-185 (452)
96 4f3x_A Putative aldehyde dehyd 28.2 1.5E+02 0.0051 24.7 6.6 77 13-97 162-248 (498)
97 2wme_A BADH, betaine aldehyde 28.1 1.5E+02 0.0052 24.6 6.6 79 12-98 142-231 (490)
98 2w8n_A Succinate-semialdehyde 27.4 1.3E+02 0.0043 25.1 6.0 76 14-97 148-237 (487)
99 3iwj_A Putative aminoaldehyde 27.4 1.3E+02 0.0045 25.1 6.2 78 12-97 151-239 (503)
100 2j6l_A Aldehyde dehydrogenase 27.2 2.3E+02 0.008 23.5 7.6 76 14-97 159-248 (500)
101 3jz4_A Succinate-semialdehyde 26.6 1.7E+02 0.0059 24.2 6.7 76 14-97 147-233 (481)
102 3ed6_A Betaine aldehyde dehydr 26.5 1.6E+02 0.0053 24.8 6.4 66 14-79 172-248 (520)
103 3prl_A NADP-dependent glyceral 24.5 1.6E+02 0.0054 24.7 6.1 75 14-96 154-239 (505)
104 2d4e_A 5-carboxymethyl-2-hydro 24.3 1.8E+02 0.0061 24.4 6.4 76 14-97 164-250 (515)
105 3ifg_A Succinate-semialdehyde 23.8 1.4E+02 0.0048 24.8 5.7 66 14-79 150-226 (484)
106 2i2x_B MTAC, methyltransferase 22.9 1.8E+02 0.0062 21.6 5.7 86 14-103 124-218 (258)
107 3ros_A NAD-dependent aldehyde 22.3 2.4E+02 0.0083 23.3 6.8 89 13-109 124-223 (484)
108 3rh9_A Succinate-semialdehyde 22.0 1.2E+02 0.0041 25.4 4.9 66 14-79 149-225 (506)
109 3k9d_A LMO1179 protein, aldehy 22.0 2.9E+02 0.01 22.6 7.2 76 14-97 110-200 (464)
110 3pqa_A Lactaldehyde dehydrogen 21.4 2E+02 0.0069 23.9 6.1 48 13-60 131-183 (486)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=2.2e-44 Score=308.99 Aligned_cols=229 Identities=44% Similarity=0.722 Sum_probs=210.1
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++..++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..|++.......++
T Consensus 217 ~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 296 (536)
T 3ni2_A 217 NLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDL 296 (536)
T ss_dssp SSCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCC
T ss_pred cccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCC
Confidence 45678899999999999999997778999999999999999999999999999999999999999999999887777789
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccccccccccccc---CCCCCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMEN---SFAGSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~---~~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
+++|.++++|+++++++.++|++.+++..+++ .||+||++.+++.+. ........+.+|+|+++++++++|+++++
T Consensus 297 ~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 375 (536)
T 3ni2_A 297 SSLRMIKSGGAPLGKELEDTVRAKFPQARLGQ-GYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGA 375 (536)
T ss_dssp TTCCEEEEESSCCCHHHHHHHHHHCTTSEEEE-EEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCC
T ss_pred ccceEEEECCCCCCHHHHHHHHHHCCCCCccc-cccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCc
Confidence 99999999999999999999999997788998 999999987665432 12224456789999999999999988899
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+|+|+.++.||+++++.+...|..+|||+|||++++++||++++.||+||+||++|++|+|.|
T Consensus 376 ~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 448 (536)
T 3ni2_A 376 SLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAE 448 (536)
T ss_dssp BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHH
T ss_pred CCCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHH
Confidence 9999999999999999999999999999999988999999999999999999999999999999999999865
No 2
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=1.1e-43 Score=305.52 Aligned_cols=225 Identities=42% Similarity=0.682 Sum_probs=190.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
.+..++|++++.+|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|.++++|+++..|++.......+++
T Consensus 229 ~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 307 (550)
T 3rix_A 229 NQIIPDTAILSVVPFHHGFGM-FTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLS 307 (550)
T ss_dssp CCCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCT
T ss_pred ccCCCCcEEEEechHHHHHHH-HHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcc
Confidence 467788999999999999999 6778899999999999999999999999999999999999999999998777777899
Q ss_pred CceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCC
Q 026609 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 167 (236)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~ 167 (236)
++|.++++|+++++++.++|.+.++...+.+ .||+||++..++..... ....+.+|+|+++++++++|++++++++.
T Consensus 308 ~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~-~YG~TE~~~~~~~~~~~--~~~~~~vG~~~~~~~~~i~d~~~~~~~~~ 384 (550)
T 3rix_A 308 NLHEIASGGAPLSKEVGEAVAKRFHLPGIRQ-GYGLTETTSAILITPEG--DDKPGAVGKVVPFFEAKVVDLDTGKTLGV 384 (550)
T ss_dssp TCCEEEECSSCCCHHHHHHHHHHTTCSCCEE-EEECGGGSSEEEECCTT--CCCTTEEEEECTTCEEEEECTTTCCBCCT
T ss_pred cccEEEEecCCCCHHHHHHHHHHcCCCcccc-ccCcCccccceecCCCC--CCCCCCcccccCCcEEEEEeCCCCcCCCC
Confidence 9999999999999999999999998545777 99999999877654432 45567899999999999999888999999
Q ss_pred CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 168 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 168 g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|+.|||+|+|+.++.||+++++.+...|+.+|||+|||++++++||++++.||+||+||++|++|+|.|
T Consensus 385 g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 453 (550)
T 3rix_A 385 NQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAE 453 (550)
T ss_dssp TCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC------------------
T ss_pred CCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeCCceEEEEecchheeEECCEEECHHH
Confidence 999999999999999999999999999988999999999999999999999999999999999999986
No 3
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=1.9e-43 Score=303.85 Aligned_cols=225 Identities=39% Similarity=0.677 Sum_probs=204.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 87 (236)
++..++|++++.+|++|.+|+...++.++ .|+++++.+.+++..+++.++++++|+++++|+++..|.+.......+++
T Consensus 231 ~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 309 (548)
T 2d1s_A 231 NQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLS 309 (548)
T ss_dssp CCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCT
T ss_pred cCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCccccccccc
Confidence 56788999999999999999965577777 99999999999999999999999999999999999999988766666889
Q ss_pred CceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCCC
Q 026609 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 167 (236)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~ 167 (236)
++|.++++|+++++++.++|.+.+++..+++ .||+||++.+++..... ....+.+|+|+++++++++|+++++++++
T Consensus 310 ~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~~~~~ 386 (548)
T 2d1s_A 310 NLVEIASGGAPLSKEVGEAVARRFNLPGVRQ-GYGLTETTSAIIITPEG--DDKPGASGKVVPLFKAKVIDLDTKKSLGP 386 (548)
T ss_dssp TCCEEEECSSCCCHHHHHHHHHHTTCSCCEE-EEECGGGSSEEEECCTT--CCCTTCCBEECTTCEEEEECTTTCCBCCT
T ss_pred ceeEEEEcCccCCHHHHHHHHHHcCCCceee-ccccccccceeeecCcc--cCCCCCCCccCCCceEEEEeCCcCccCCC
Confidence 9999999999999999999999997678888 99999998776653222 34567899999999999999778999999
Q ss_pred CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 168 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 168 g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
|+.|||+++|+.++.||+++++.+...|..+|||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 387 g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~G~~v~p~e 455 (548)
T 2d1s_A 387 NRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAE 455 (548)
T ss_dssp TCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEEEEGGGCBCBTTCCBCHHH
T ss_pred CCCeEEEECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEEcCCCeEEEeccccceEEECCEEECHHH
Confidence 999999999999999999999999998878999999999999999999999999999999999999865
No 4
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=2.8e-43 Score=299.98 Aligned_cols=226 Identities=30% Similarity=0.451 Sum_probs=206.2
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...++..++|++++.+|++|.+|+...++.+++.|+++++.+.+++..+++.++ ++|.++++|+++..|++.......
T Consensus 188 ~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~ 265 (503)
T 4fuq_A 188 VDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKE 265 (503)
T ss_dssp HHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTT
T ss_pred HHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCcccc
Confidence 345678899999999999999998666788999999999999999999999998 899999999999999998877777
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
.++++|.++++|+++++++.+.|.+.++ ..+++ .||+||++..+.... ......+.+|+|+++++++++|++++++
T Consensus 266 ~~~~lr~~~~gg~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~--~~~~~~~~~G~p~~~~~~~i~d~~~g~~ 341 (503)
T 4fuq_A 266 TTGHMRLFISGSAPLLADTHREWSAKTG-HAVLE-RYGMTETNMNTSNPY--DGDRVPGAVGPALPGVSARVTDPETGKE 341 (503)
T ss_dssp TTTTCCEEEECSSCCCHHHHHHHHHHHS-CCEEE-CCEETTTEECBCCCS--SSCCCTTEEEEBCTTCEEEEECTTTCCB
T ss_pred chhhcEEEEECCCCCCHHHHHHHHHHhC-CCccc-eEcccccCcccccCC--CCCCcCCccccCCCCeEEEEEECCCCCC
Confidence 7899999999999999999999999987 78888 999999987755322 2245567899999999999999889999
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++|+.|||+|+|+.++.||+++++.+...|..+|||+|||++++++||.+++.||+||+||++|++|+|.|
T Consensus 342 ~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 413 (503)
T 4fuq_A 342 LPRGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDERGYVHILGRGKDLVITGGFNVYPKE 413 (503)
T ss_dssp CCTTCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTTCEEEECCSSTTCEEETTEEECHHH
T ss_pred CcCCCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCCCcEEEEecCCCEEEECCEEECHHH
Confidence 999999999999999999999999999999988999999999999999999999999999999999999965
No 5
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=4.7e-43 Score=300.90 Aligned_cols=227 Identities=25% Similarity=0.346 Sum_probs=200.3
Q ss_pred eeccCCCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..++..++|++++.+|++|.+++.. .++.+++.|+++++.+.+++..+++.++++++|+++++|+++..|++.......
T Consensus 216 ~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 295 (539)
T 1mdb_A 216 EVCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRD 295 (539)
T ss_dssp HHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCC
T ss_pred HhhCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCC
Confidence 3467888999999999999999955 688999999999999999999999999999999999999999999887655666
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCC-cEEEEEeCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPG-VEALIVSVDTQK 163 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~-~~~~~~~~~~~~ 163 (236)
+++++|.+++||+++++++.++|.+.++ ..+++ .||+||++..+.. ...........+|+|+++ .+++++| ++++
T Consensus 296 ~l~~lr~~~~gG~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~~~i~d-~~~~ 371 (539)
T 1mdb_A 296 DLSSLQVLQVGGAKFSAEAARRVKAVFG-CTLQQ-VFGMAEGLVNYTR-LDDPEEIIVNTQGKPMSPYDESRVWD-DHDR 371 (539)
T ss_dssp CCTTCCEEEEESSCCCHHHHTTHHHHTC-SEEEE-EEECTTSCEEECC-TTSCHHHHHHCCCEESSTTCEEEEEC-TTSC
T ss_pred CccceeEEEEcCCCCCHHHHHHHHHHhC-CcEEE-EEcCCCCcccccC-CCCcHHhcCCCCCcccCCCceEEEEC-CCCC
Confidence 8899999999999999999999999986 88888 9999996543332 111111234578999976 4799999 5899
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+|+|+.++.||+++++.+...|..+|||+|||++++++||++++.||+||+||++|++|+|.|
T Consensus 372 ~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 444 (539)
T 1mdb_A 372 DVKPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEE 444 (539)
T ss_dssp BCCTTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHH
T ss_pred CCcCCCcceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEECCCCcEEEeccccceEEECCEEECHHH
Confidence 9999999999999999999999999999999988999999999999999999999999999999999999965
No 6
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=4.2e-42 Score=300.83 Aligned_cols=229 Identities=21% Similarity=0.286 Sum_probs=201.9
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC-
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL- 80 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~- 80 (236)
..+++.++|++++.+|++|..|+...++.++..|+++++.+. +++..+++.++++++|+++++|++++.|++...
T Consensus 291 ~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 370 (652)
T 1pg4_A 291 YVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDK 370 (652)
T ss_dssp HHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGG
T ss_pred HhcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCcc
Confidence 346788999999999999999997778899999999999874 589999999999999999999999999998754
Q ss_pred -cCCCCCCCceEEeecCCCCCHHHHHHHHHhCCC--CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEE
Q 026609 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIV 157 (236)
Q Consensus 81 -~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~--~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~ 157 (236)
....+++++|.++++||++++++++++.+.++. ..+++ .||+||++..++.........+.+.+|+|+++++++++
T Consensus 371 ~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~ 449 (652)
T 1pg4_A 371 AIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVD-TWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALV 449 (652)
T ss_dssp GTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEE-EBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEE
T ss_pred ccccCCcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEc-cccCcccccceecCCCCCcCccCCccccCcCCCeEEEE
Confidence 244578999999999999999999999998862 67888 99999998766654332224456889999999999999
Q ss_pred eCCCCCCCCCCCceEEEEec--CccchhhcCCccccccccc--CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 158 SVDTQKPLPPNQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 158 ~~~~~~~~~~g~~Gel~v~~--~~~~~~~~~~~~~~~~~~~--~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
| +++++++.|+.|||+|++ |+++.+||++++.+...+. .+|||+|||++++++||+++|.||+||+||++|++|+
T Consensus 450 d-~~g~~v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~ 528 (652)
T 1pg4_A 450 D-NEGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLG 528 (652)
T ss_dssp C-TTCCBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEE
T ss_pred C-CCCCCcCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEcCCCcEEEEecCCCEEEECCEEEC
Confidence 9 579999999999999999 7899999999988876653 3789999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 529 ~~e 531 (652)
T 1pg4_A 529 TAE 531 (652)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 7
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=1.1e-41 Score=310.04 Aligned_cols=229 Identities=45% Similarity=0.741 Sum_probs=197.9
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
.++..++|++++.+|++|.+++...++.++..|+++++.+++++..+++.++++++|.+.++|+++..|++.......++
T Consensus 264 ~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 343 (979)
T 3tsy_A 264 NLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDL 343 (979)
T ss_dssp SSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCC
T ss_pred cccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCc
Confidence 45678899999999999999997778899999999999999999999999999999999999999999999887777789
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccccccccccccc---CCCCCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMEN---SFAGSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~---~~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
+++|.++++|+++++++.++|.+.+++..+++ .||+||++.+++... ........+.+|+|+++++++++|+++++
T Consensus 344 ~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~ 422 (979)
T 3tsy_A 344 SSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQ-GYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGD 422 (979)
T ss_dssp TTCCEEEESSCCCCSSHHHHHHHHCTTCEEEE-CEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCC
T ss_pred cceEEEEEcCCCCCHHHHHHHHHHCCCCeEEe-eechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCC
Confidence 99999999999999999999999997788999 999999987665432 12223456789999999999999988899
Q ss_pred CCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+|+|+.++.||+++++.+...|..+|||+|||++++++||.+++.||+||+||++|++|+|.|
T Consensus 423 ~~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~e 495 (979)
T 3tsy_A 423 SLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAE 495 (979)
T ss_dssp BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEESCC-------------
T ss_pred CCCCCCccEEEEECCCccccccCChhhhhhhccCCCcEEcCCEEEEcCCceEEEecCCCCEEEECCEEECHHH
Confidence 9999999999999999999999999999999988999999999999999999999999999999999999986
No 8
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=2e-41 Score=292.97 Aligned_cols=223 Identities=23% Similarity=0.304 Sum_probs=199.0
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc--CCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM--AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~--~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..+..++|++++.+|++|..++...++.++..|+++++. +.+++..+++.++++++|.++++|++++.|++.. ....
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~ 338 (580)
T 3etc_A 260 WQNVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED-LSHY 338 (580)
T ss_dssp TSCCCTTCEEEECCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSC-C---
T ss_pred hhCCCCCceEEEeCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcc-cccC
Confidence 457788999999999999998866688999999999987 4689999999999999999999999999998863 3556
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
+++++|.++++||++++++.++|.+.++ ..+++ .||+||++..++..... ..+.+++|+|+++++++++| +++++
T Consensus 339 ~l~~lr~i~~gGe~l~~~~~~~~~~~~g-~~i~~-~YG~TE~~~~~~~~~~~--~~~~~~~G~p~~~~~v~ivd-~~g~~ 413 (580)
T 3etc_A 339 NFSTLKYAVVAGEPLNPEVFNRFLEFTG-IKLME-GFGQTETVVTIATFPWM--EPKPGSIGKPTPGYKIELMD-RDGRL 413 (580)
T ss_dssp CCTTCCEEEECSSCCCHHHHHHHHHHHS-CCCEE-EECCTTSSCCEECCTTS--CCCTTCCBEECTTCEEEEEC-TTSCB
T ss_pred CCccceEEEEccCCCCHHHHHHHHHHhC-CeEec-ccccccccceeecCCCC--CCCCCccccCCCCCEEEEEC-CCCCC
Confidence 7899999999999999999999999886 88998 99999998776654332 45678899999999999999 57999
Q ss_pred CCCCCceEEEEec-----CccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRG-----PNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~-----~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++|+.|||+|++ +.++.+|+++++.+...| .+|||+|||++++++||++++.||+||+||++|++|+|.|
T Consensus 414 ~~~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f-~~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~e 489 (580)
T 3etc_A 414 CEVGEEGEIVINTMEGKPVGLFVHYGKDPERTEETW-HDGYYHTGDMAWMDEDGYLWFVGRADDIIKTSGYKVGPFE 489 (580)
T ss_dssp CCTTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEESSSCEEETTEEECHHH
T ss_pred CCCCCceEEEEecCCCCCCeeeccccCCHhHHHhhc-CCCEEecCcEEEECCCCcEEEEecCCCEEEECCEEECHHH
Confidence 9999999999997 789999999999999988 6899999999999999999999999999999999999965
No 9
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=1.4e-42 Score=298.34 Aligned_cols=228 Identities=24% Similarity=0.357 Sum_probs=190.3
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 83 (236)
.+.++..++|++++.+|++|.+++.. .++.++..|+++++.+.+++..+++.++++++|.++++|+++..|++......
T Consensus 224 ~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 303 (544)
T 3o83_A 224 AEICGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYK 303 (544)
T ss_dssp HHHTTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTH
T ss_pred HHHhCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhcc
Confidence 34567889999999999999999854 58899999999999999999999999999999999999999999998876666
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccC-CCcEEEEEeCCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQ 162 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~~~~~~ 162 (236)
.+++++|.++++|+++++++.+++.+.++ ..+++ .||+||++..+...... .......+|+|+ ++.+++++| +++
T Consensus 304 ~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~~i~d-~~~ 379 (544)
T 3o83_A 304 DQIQSLKLLQVGGASFPESLARQVPEVLN-CKLQQ-VFGMAEGLVNYTRLDDS-DEQIFTTQGRPISSDDEIKIVD-EQY 379 (544)
T ss_dssp HHHTTCCEEEEESSCCCHHHHTHHHHHHC-SEEEE-EEECTTSCEEECCTTSC-HHHHHHCCCEESCTTCEEEEEC-TTS
T ss_pred ccCCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEe-eeccccccceeecCCCc-hhhccCCCceecCCCcEEEEEC-CCC
Confidence 67889999999999999999999999986 88888 99999987654432211 122345789996 899999999 689
Q ss_pred CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 163 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 163 ~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++|+.|||+|+|+.++.||+++++.+...|..+|||+|||++++++||.+++.||+||+||++|++|+|.|
T Consensus 380 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 453 (544)
T 3o83_A 380 REVPEGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQRTPDGNLRVVGRIKDQINRGGEKIASEE 453 (544)
T ss_dssp CBCCTTCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEECTTSCEEEEEEEC--------------
T ss_pred CCCCCCCeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCEEEEcCCCCEEEEeecCCEEEeCCEEECHHH
Confidence 99999999999999999999999999999999988999999999999999999999999999999999999986
No 10
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=1e-41 Score=293.29 Aligned_cols=229 Identities=28% Similarity=0.464 Sum_probs=191.7
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC-
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK- 83 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~- 83 (236)
...++..++|++++.+|++|.+++. .++.++..|+++++.+.+++..+++.++++++|.++++|+++..|++......
T Consensus 213 ~~~~~~~~~d~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 291 (549)
T 3g7s_A 213 AVATGLSHMDTIVGCMPMFHSAEFG-LVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNK 291 (549)
T ss_dssp HHHHCCCTTCEEECCSCTTSHHHHH-HHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCC
T ss_pred HHHcCCCCCCEEEEeCcHHHHHHHH-HHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcc
Confidence 3456788999999999999999994 48889999999999999999999999999999999999999999988754433
Q ss_pred -CCCCCceEEeecCCCCCHHHHHHHHHh----CCC--CceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEE
Q 026609 84 -FDLSSLKLVGSGAAPLGKELMEECAKN----VPS--ATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALI 156 (236)
Q Consensus 84 -~~l~~lr~i~~~G~~~~~~~~~~~~~~----~~~--~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~ 156 (236)
.+++++|.++++|+++++++.+++.+. ++. ..+.+ .||+||++.+++...... ......+|+|++++++++
T Consensus 292 ~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~i 369 (549)
T 3g7s_A 292 TYDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQ-IWGMTEACPMVTTNPPLR-LDKSTTQGVPMSDIELKV 369 (549)
T ss_dssp CCCCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEE-EEECGGGSSEEEECCGGG-GGGTTSCCEECTTCEEEE
T ss_pred cCCccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccc-eEeccccchhhhcCCccc-cCcCCCccccCCCCEEEE
Confidence 578899999999999999999999987 542 67888 999999998776543322 245678999999999999
Q ss_pred EeCCCCCCCCCCCceEEEEecCccchhhcCCccccccccc--CCC--eEecCceEEEcCCCcEEEEcccCCceeeccEEe
Q 026609 157 VSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID--KKG--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 232 (236)
Q Consensus 157 ~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~--~~~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 232 (236)
+|++++++++.|+.|||+|+|+.++.||+++++.+...|. .+| ||+|||++++++||.+++.||+||+||++|++|
T Consensus 370 ~d~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v 449 (549)
T 3g7s_A 370 ISLEDGRELGVGESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTI 449 (549)
T ss_dssp ECSSSCCEECTTCCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEEEECTTSCEEEEEEC-----------
T ss_pred EeCCCCcCCCCCCceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcEEEEcCCceEEEeccccceEEECCEEE
Confidence 9988999999999999999999999999999999988873 566 999999999999999999999999999999999
Q ss_pred ecCC
Q 026609 233 TSNW 236 (236)
Q Consensus 233 ~p~~ 236 (236)
+|.|
T Consensus 450 ~p~e 453 (549)
T 3g7s_A 450 APFE 453 (549)
T ss_dssp -CHH
T ss_pred CHHH
Confidence 9975
No 11
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=3.8e-41 Score=290.69 Aligned_cols=224 Identities=19% Similarity=0.301 Sum_probs=200.6
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 83 (236)
..+++.++|++++.+|++|..++...++.++..|+++++.+ .+++..+++.++++++|.++++|++++.|++.. ...
T Consensus 240 ~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~ 318 (570)
T 3c5e_A 240 GWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD-LSS 318 (570)
T ss_dssp TTTSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-TTT
T ss_pred hhcCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-ccc
Confidence 34667889999999999999999667889999999999986 689999999999999999999999999998863 344
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQK 163 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~ 163 (236)
.+++++|.++++|+++++++.+.|.+.++ ..+++ .||+||++.++...... ....+.+|+|+++++++++| ++++
T Consensus 319 ~~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~i~~-~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~v~i~d-~~g~ 393 (570)
T 3c5e_A 319 YKFPHLQNCVTVGESLLPETLENWRAQTG-LDIRE-SYGQTETGLTCMVSKTM--KIKPGYMGTAASCYDVQIID-DKGN 393 (570)
T ss_dssp CCCTTCCEEEEESSCCCHHHHHHHHHHHS-CCCEE-EEEETTTEEEEECCTTS--CCCTTCCCEECTTCCEEEEC-TTSC
T ss_pred cccccceEEEEcCCcCCHHHHHHHHHHhC-Cchhh-ccchhhcccceecCccc--ccCCCcccccCCCceEEEEC-CCCC
Confidence 56889999999999999999999999886 78888 99999998766543222 34567899999999999999 5799
Q ss_pred CCCCCCceEEEEe-----cCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 164 PLPPNQLGEIWLR-----GPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 164 ~~~~g~~Gel~v~-----~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++.|+.|||+|+ |+.++.||+++++.+...| .++||+|||++++++||++++.||+||+||++|++|+|.|
T Consensus 394 ~~~~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f-~~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~V~p~e 470 (570)
T 3c5e_A 394 VLPPGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANI-RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSE 470 (570)
T ss_dssp BCCTTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTE-ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHH
T ss_pred CCCCCCCCeeEEeccCCCCchhhccccCChhHhhhhh-cCCccccceeEEEcCCceEEEEecCCCEEEECCEEECHHH
Confidence 9999999999999 9999999999999998888 5899999999999999999999999999999999999965
No 12
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=1.7e-41 Score=291.41 Aligned_cols=226 Identities=29% Similarity=0.409 Sum_probs=197.4
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..+++.++|++++.+|++|.+++ ..++.+++.|+++++.+. +++..+++.++++++|+++++|+++..|++.......
T Consensus 212 ~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 290 (541)
T 1v25_A 212 DGTALSEKDVVLPVVPMFHVNAW-CLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGH 290 (541)
T ss_dssp TTTCCCTTCEEEECSCTTSHHHH-THHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTC
T ss_pred ccccCCCCCEEEEeccchhhhHH-HHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCC
Confidence 34567889999999999999999 567788999999999874 7999999999999999999999999999887655556
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCC---------CCCCCCccccCCCcEEE
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAG---------SRNIGSAGALAPGVEAL 155 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~~~~~ 155 (236)
+++++|.++++|+++++++.++| +.++ ..+++ .||+||++.+++....... ......+|+|+++++++
T Consensus 291 ~l~~lr~i~~gG~~l~~~~~~~~-~~~g-~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ 367 (541)
T 1v25_A 291 RLKTLRRLVVGGSAAPRSLIARF-ERMG-VEVRQ-GYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLR 367 (541)
T ss_dssp CCSSCCEEEECSSCCCHHHHHHH-HHTT-CEEEE-EEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEE
T ss_pred cchhccEEEECCCCCCHHHHHHH-HHhC-Cceee-cccccccccceecccccccccccCccccccccCCCCCcCCCcEEE
Confidence 78999999999999999999999 6665 88888 9999999877665432110 01246789999999999
Q ss_pred EEeCCCCCCCCC--CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 156 IVSVDTQKPLPP--NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 156 ~~~~~~~~~~~~--g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
++| +++++++. ++.|||+|+|+.++.||+++++.+...|..+|||+|||+++++++|++++.||+||+||++|++|+
T Consensus 368 i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~dG~l~~~GR~~d~ik~~G~~v~ 446 (541)
T 1v25_A 368 VAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWIS 446 (541)
T ss_dssp EEC-TTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEE
T ss_pred EEC-CCCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCEEEEcCCceEEEeecccceeeeCCEEEC
Confidence 999 57888884 368999999999999999999999999977999999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 447 p~e 449 (541)
T 1v25_A 447 SVD 449 (541)
T ss_dssp HHH
T ss_pred HHH
Confidence 965
No 13
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=1.6e-41 Score=290.06 Aligned_cols=225 Identities=27% Similarity=0.417 Sum_probs=201.2
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...++..++|++++.+|++|.+++...++.++ .|+++++.+.+++..+++.++++++|.+.++|++++.|.+..+....
T Consensus 203 ~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 281 (517)
T 3r44_A 203 ASTIDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAEL 281 (517)
T ss_dssp HHHSCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHC
T ss_pred HHhcCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccC
Confidence 34567889999999999999999954455555 99999999999999999999999999999999999999987766666
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
+++++|.+++||+++++++.+.|.+. +..+++ .||+||++..++...........+.+|+|.++++++++| +++.+
T Consensus 282 ~~~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~ 357 (517)
T 3r44_A 282 DAPDFRYFITGGAPMPEALIKIYAAK--NIEVVQ-GYALTESCGGGTLLLSEDALRKAGSAGRATMFTDVAVRG-DDGVI 357 (517)
T ss_dssp CCTTCCEEEECSSCCCHHHHHHHHHT--TCEEEE-EEECGGGTTCEEEECGGGTTTTTTCCBEECTTEEEEEEC-TTSCE
T ss_pred CCCcccEEEECCCCCCHHHHHHHHhc--CCcEEE-eecccccccceeecCCccccccCCCCCcCCCCeEEEEEC-CCCCC
Confidence 78999999999999999999999987 488999 999999988766544433345678899999999999999 57888
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++.| .|||+|+|+.++.||+++++.+...| .+|||+|||++++++||.+++.||+||+||++|++|+|.|
T Consensus 358 ~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f-~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 427 (517)
T 3r44_A 358 REHG-EGEVVIKSDILLKEYWNRPEATRDAF-DNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAE 427 (517)
T ss_dssp ESSE-EEEEEEEETTSCSEETTCHHHHHHTE-ETTEEEEEEEEEECTTSCEEEEECGGGCEEETTEEECHHH
T ss_pred CCCC-CeEEEEeCcchhhhhCCChhhhHhhh-cCCCEecceeEEEcCCeeEEEecCCcCEEEECCEEECHHH
Confidence 8999 89999999999999999999999988 7899999999999999999999999999999999999965
No 14
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=2.6e-41 Score=288.51 Aligned_cols=227 Identities=20% Similarity=0.252 Sum_probs=203.1
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 82 (236)
..++..++|++++.+|++|..++ ..++.+++.|+++++.+. +++..+++.++++++|.+.++|+++..++......
T Consensus 178 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 256 (512)
T 3fce_A 178 EDFNLQTGQVFLNQAPFSFDLSV-MDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFS 256 (512)
T ss_dssp HHTTCCSSCEEEECSCTTSGGGH-HHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCS
T ss_pred HhcCCCCCCEEEEeCCccHhHHH-HHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhcccc
Confidence 45678899999999999999998 678999999999999885 68999999999999999999999999998887767
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC---CCCCCCCccccCCCcEEEEEeC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSV 159 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~~~ 159 (236)
...++++|.++++|+++++++.++|.+.|++..+++ .||+||++..++...... .......+|+|.++++++++|
T Consensus 257 ~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d- 334 (512)
T 3fce_A 257 ESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMN-TYGPTEATVAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMK- 334 (512)
T ss_dssp TTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEE-EECCGGGSSCSEEEECCHHHHHHCSSCCCEEECTTCEEEEEC-
T ss_pred chhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEe-CcccChhhhheeeEEeccccccccCCCccccccCCcEEEEEC-
Confidence 778899999999999999999999999997788999 999999988766533211 123456789999999999999
Q ss_pred CCCCCCCCCCceEEEEecCccchhhcCCcccccccc---cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 160 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 160 ~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++++++|+.|||+|+|+.++.||+++++.+...| +.++||+|||++++ +||++++.||+||+||++|++|+|.|
T Consensus 335 ~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~-~dG~l~i~GR~~d~ik~~G~~v~p~e 413 (512)
T 3fce_A 335 EDGTIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYV-ENGLLFYNGRLDFQIKLHGYRMELEE 413 (512)
T ss_dssp SSSCBCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEE-ETTEEEEEEEGGGCEEETTEEECHHH
T ss_pred CCCCCCCCCCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEe-cCCEEEEecccCCEEEECCEEECHHH
Confidence 689999999999999999999999999999998877 34679999999999 89999999999999999999999965
No 15
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=7.7e-41 Score=285.50 Aligned_cols=228 Identities=20% Similarity=0.275 Sum_probs=201.6
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 81 (236)
...++..++|++++.+|++|..++ ..++.++..|+++++.+. +++..+++.++++++|.+.++|+++..++.....
T Consensus 176 ~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 254 (511)
T 3e7w_A 176 CADFPVSGGKIFLNQAPFSFDLSV-MDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGF 254 (511)
T ss_dssp HHHSTTTTTCEEEECSCTTSTHHH-HHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTC
T ss_pred HHhcCCCccceEEEeCCccHHHHH-HHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc
Confidence 345678889999999999999998 678899999999999875 6899999999999999999999999999988776
Q ss_pred CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC---CCCCCCCccccCCCcEEEEEe
Q 026609 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~~ 158 (236)
....++++|.++++|+++++++.+.+.+.+++..+++ .||+||++..++...... .......+|+|.++++++++|
T Consensus 255 ~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d 333 (511)
T 3e7w_A 255 SQDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFN-TYGPTEATVAVTSVEITNDVISRSESLPVGFAKPDMNIFIMD 333 (511)
T ss_dssp STTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEE-CCCCGGGSSCSEEEEECHHHHTTCSSCCCBEECTTCEEEEEC
T ss_pred ccccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEe-CcccchheeeeeEEeccccccccCCcCCCcceeCCCEEEEEC
Confidence 7778899999999999999999999999997789999 999999988766532211 123455799999999999999
Q ss_pred CCCCCCCCCCCceEEEEecCccchhhcCCccccccccc-CCC--eEecCceEEEcCCCcEEEEcccCCceeeccEEeecC
Q 026609 159 VDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-KKG--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 159 ~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~-~~~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
++++++++|+.|||+|+|+.++.||+++++.+...|. .+| ||+|||++++ +||.+++.||+||+||++|+||+|.
T Consensus 334 -~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~-~dG~l~~~GR~~d~ik~~G~~v~p~ 411 (511)
T 3e7w_A 334 -EEGQPLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFI-QDGQIFCQGRLDFQIKLHGYRMELE 411 (511)
T ss_dssp -TTSCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEE-ETTEEEEEEESSSEEEETTEEEEHH
T ss_pred -CCCCCCCCCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEc-cCCeEEEEccccCEEEECCEEeCHH
Confidence 5799999999999999999999999999999988873 223 7999999999 6999999999999999999999996
Q ss_pred C
Q 026609 236 W 236 (236)
Q Consensus 236 ~ 236 (236)
|
T Consensus 412 e 412 (511)
T 3e7w_A 412 E 412 (511)
T ss_dssp H
T ss_pred H
Confidence 5
No 16
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=5.9e-41 Score=285.79 Aligned_cols=221 Identities=22% Similarity=0.355 Sum_probs=196.6
Q ss_pred eccC--CCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC--cC
Q 026609 7 ETAG--ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VK 82 (236)
Q Consensus 7 ~~~~--~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~ 82 (236)
.++. .++|++++.+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|+++++|++++.|++... ..
T Consensus 188 ~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 267 (504)
T 1t5h_X 188 QVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGS 267 (504)
T ss_dssp TTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTC
T ss_pred hhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccc
Confidence 3455 7789999999999999986678899999999999999999999999999999999999999999988652 24
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 162 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~ 162 (236)
..+++++|.++++|+++++++.+.|.+.++ ..+++ .||+||++. +.... ....+.+|.|.++++++++|. .+
T Consensus 268 ~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~-~~~~~----~~~~~~~g~p~~~~~~~i~~~-~~ 339 (504)
T 1t5h_X 268 SLKLDSLRHVTFAGATMPDAVLETVHQHLP-GEKVN-IYGTTEAMN-SLYMR----QPKTGTEMAPGFFSEVRIVRI-GG 339 (504)
T ss_dssp CCCCTTCCEEEECCTTCCHHHHHHHHHHCC-SEEEE-EEEETTTEE-EEEEE----SCSSSSEEBCCTTCCEEEECT-TS
T ss_pred cccCccccEEEEcCCcCCHHHHHHHHHhcC-cceee-eeccccccc-ccccc----CCCCCccccCCCCCceeEEec-cC
Confidence 456889999999999999999999999997 78888 999999933 22211 234577899999999999995 45
Q ss_pred ---CCCCCCCceEEEEe-cCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 163 ---KPLPPNQLGEIWLR-GPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 163 ---~~~~~g~~Gel~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++++.|+.|||+++ ++.++.||+++++.+...| .+|||+|||++++++||++++.||+||+||++|++|+|.|
T Consensus 340 ~~~~~~~~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f-~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 416 (504)
T 1t5h_X 340 GVDEIVANGEEGELIVAASDSAFVGYLNQPQATAEKL-QDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSE 416 (504)
T ss_dssp CTTCBCCTTCCEEEEEECCTTSCCCBTTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHH
T ss_pred CCCCcCCCCCcceEEEeCCceeeceecCCchhhhhhh-cCCccccCcEEEECCCceEEEeCcccCEEEECCEEECHHH
Confidence 89999999999999 8999999999999999888 7899999999999999999999999999999999999865
No 17
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=2.4e-41 Score=296.35 Aligned_cols=230 Identities=20% Similarity=0.321 Sum_probs=201.8
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC-
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL- 80 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~- 80 (236)
..+++.++|++++.+|++|..|+...++.++..|+++++.+. +++..+++.++++++|+++++|++++.|++...
T Consensus 297 ~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~ 376 (663)
T 1ry2_A 297 YTFDTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDS 376 (663)
T ss_dssp HHSCCCSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTT
T ss_pred HhcCCCCCcEEEEcCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCcc
Confidence 457788999999999999999997778899999999999864 578999999999999999999999999987654
Q ss_pred -cCCCCCCCceEEeecCCCCCHHHHHHHHHhCC--CCceeeccccccccccccccccC-CCCCCCCCCccccCCCcEEEE
Q 026609 81 -VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP--SATVIQVGYGLTETSGIATMENS-FAGSRNIGSAGALAPGVEALI 156 (236)
Q Consensus 81 -~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~--~~~v~~~~YG~tE~g~~~~~~~~-~~~~~~~~~~g~p~~~~~~~~ 156 (236)
....+++++|.++++||++++++++++.+.++ ...+++ .||+||++..+..... .....+++.+|+|++++++++
T Consensus 377 ~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i 455 (663)
T 1ry2_A 377 YIENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVD-TYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVV 455 (663)
T ss_dssp SSSSCCCTTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEE-CBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEE
T ss_pred ccccCCcCceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEE-eECCccccCeeeccCCCCCcccCCCccccCcCCCeEEE
Confidence 24457899999999999999999999999886 377888 9999999876665432 222456788999999999999
Q ss_pred EeCCCCCCCCC-CCceEEEEec--CccchhhcCCccccccccc--CCCeEecCceEEEcCCCcEEEEcccCCceeeccEE
Q 026609 157 VSVDTQKPLPP-NQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 231 (236)
Q Consensus 157 ~~~~~~~~~~~-g~~Gel~v~~--~~~~~~~~~~~~~~~~~~~--~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~ 231 (236)
+|++++++++. |+.|||++++ |+++.+||++++.+...+. .+|||+|||++++++||++++.||+||+||++|++
T Consensus 456 ~d~~~g~~v~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~r 535 (663)
T 1ry2_A 456 LDPNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHR 535 (663)
T ss_dssp ECSSSTTCEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCC
T ss_pred EcCCCCCcCCCCCcceEEEEecCCCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEcCCCCEEEEeecCCEEEECCEE
Confidence 99658999988 9999999999 5899999999998877763 37899999999999999999999999999999999
Q ss_pred eecCC
Q 026609 232 VTSNW 236 (236)
Q Consensus 232 i~p~~ 236 (236)
|+|.|
T Consensus 536 I~~~e 540 (663)
T 1ry2_A 536 LSTAE 540 (663)
T ss_dssp BCHHH
T ss_pred cCHHH
Confidence 99865
No 18
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=9.2e-41 Score=286.14 Aligned_cols=225 Identities=20% Similarity=0.314 Sum_probs=194.9
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
..++..++|++++.+|++|.+|+...++.++..|+++++. +.+++..+++.++++++|.++++|+++..+++.......
T Consensus 218 ~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 297 (529)
T 2v7b_A 218 PILGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPAR 297 (529)
T ss_dssp CCCCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCG
T ss_pred hccCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccc
Confidence 4567888999999999999999976778899999999987 578999999999999999999999999999886543332
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
...++|.++++|+++++++.+.|.+.++ ..+++ .||+||++.++...... ....+.+|+|+++++++++| +++++
T Consensus 298 ~~~~lr~~~~gGe~l~~~~~~~~~~~~g-~~i~~-~YG~TE~~~~~~~~~~~--~~~~~~~G~p~~~~~~~i~d-~~g~~ 372 (529)
T 2v7b_A 298 ADVAIRICTSAGEALPREIGERFTAHFG-CEILD-GIGSTEMLHIFLSNRAG--AVEYGTTGRPVPGYEIELRD-EAGHA 372 (529)
T ss_dssp GGCCCCEEEECSSCCCHHHHHHHHHHHS-CCEEE-EEECTTTSSEEEECCTT--CCCTTSCCEECTTCEEEEEC-TTSCB
T ss_pred cCCceEEEEEcCCCCCHHHHHHHHHHhC-Cceee-eEchhhcCceeeccccC--CCccCCcccCCCCCEEEEEC-CCCCC
Confidence 1238999999999999999999999886 88998 99999997665543222 24567899999999999999 67999
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++|+.|||+|+|+.++.+|+++++.+...| .++||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 373 ~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f-~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~e 443 (529)
T 2v7b_A 373 VPDGEVGDLYIKGPSAAVMYWNNREKSRATF-LGEWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVE 443 (529)
T ss_dssp CCTTSCEEEEEECTTCCCCBTTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEEGGGCBC----CBCHHH
T ss_pred CCCCCccEEEEecCCcccccCCChHHHHHhh-hcCCcccCceEEECCCccEEEeCccCCeEEECCEEECHHH
Confidence 9999999999999999999999999998888 5899999999999999999999999999999999999864
No 19
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=1.4e-40 Score=287.23 Aligned_cols=225 Identities=23% Similarity=0.273 Sum_probs=182.3
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 83 (236)
...+..++|++++.+|++|..+. ..++.+++.|+++++.+ .+++..+++.++++++|.+.++|+++..|++...
T Consensus 247 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--- 322 (570)
T 4gr5_A 247 DYAGFGPDEVFLQCSPVSWDAFG-LELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVP--- 322 (570)
T ss_dssp CSSCCSTTCEEEECSCTTSSTHH-HHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG---
T ss_pred hhcCCCCCCEEEEecCccHHHHH-HHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch---
Confidence 34577889999999999997666 67889999999999987 4789999999999999999999999999987643
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCC--CCCCCCCCccccCCCcEEEEEeCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSF--AGSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~--~~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
..++++|.++++|+++++++.+.+.+.+++..+++ .||+||++.+++..... ........+|+|+++++++++| ++
T Consensus 323 ~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d-~~ 400 (570)
T 4gr5_A 323 EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGN-GYGPAESMGFTTHHAVVAGDLSGTALPIGVPLAGKRAYVLD-DD 400 (570)
T ss_dssp GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEE-EECCGGGCSCSEEEECCGGGTTSSSCCCBEECTTEEEEEEC-TT
T ss_pred hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEE-eechhhheeeeeeeeecccccCCCccccceeeCCCEEEEEC-CC
Confidence 25789999999999999999999999997788888 99999998776643221 1123445689999999999999 67
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccC--------CCeEecCceEEEcCCCcEEEEcccCCceeeccEEee
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK--------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 233 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~--------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~ 233 (236)
++++++|+.|||+|+|+.++.||+++++.+...|.. ++||+|||++++++||++++.||+||+||++|+||+
T Consensus 401 ~~~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG~l~~~GR~~d~Ik~~G~~v~ 480 (570)
T 4gr5_A 401 LKPAANGALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDLARRRADGVLEYVGRADDQVKIRGFRVE 480 (570)
T ss_dssp SCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEECTTSCEEEEEC-------------
T ss_pred CCCCCCCCcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCeEEECCCCeEEEEcccCCEEEECcEEeC
Confidence 999999999999999999999999999998887743 379999999999999999999999999999999999
Q ss_pred cCC
Q 026609 234 SNW 236 (236)
Q Consensus 234 p~~ 236 (236)
|.|
T Consensus 481 p~e 483 (570)
T 4gr5_A 481 PGE 483 (570)
T ss_dssp ---
T ss_pred HHH
Confidence 986
No 20
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=1.7e-40 Score=288.81 Aligned_cols=226 Identities=21% Similarity=0.279 Sum_probs=197.2
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC--CCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 83 (236)
..++..++|++++.+|++|..++ ..++.++..|+++++.+ .+++..+++.++++++|.++++|++++.|++.. .
T Consensus 197 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~---~ 272 (620)
T 4dg8_A 197 SFLAFAPQMRFLVNSPLSFDAAT-LEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD---P 272 (620)
T ss_dssp GGGTTCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---G
T ss_pred HhhCCCCCCEEEEECccCHHHHH-HHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---h
Confidence 35678889999999999999998 67899999999999975 579999999999999999999999999998753 2
Q ss_pred CCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccC--CCCCCCCCCccccCCCcEEEEEeCCC
Q 026609 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENS--FAGSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~--~~~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
..++++|.+++|||++++++.+.+.+.+++..+++ .||+||++.+++.... .........+|+|+++++++++|++.
T Consensus 273 ~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~ 351 (620)
T 4dg8_A 273 DCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVN-GYGPTENTTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLDEHG 351 (620)
T ss_dssp GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEE-EECCGGGCSCSEEEECCTGGGGSSSCCCBEECTTEEEEEECTTS
T ss_pred hhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEe-eEchhhhhhheEEEeccccccCCCCCCceecccCcEEEEECccC
Confidence 35789999999999999999999998887788999 9999999887654322 11234456899999999999999544
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccCC-------CeEecCceEEEcCCCcEEEEcccCCceeeccEEeec
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK-------GWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 234 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p 234 (236)
..+++.|+.|||+|+|+.++.||+++++.+...|..+ +||+|||++++++||.++|.||+||+||++|+||+|
T Consensus 352 ~~~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~dd~Ik~~G~ri~~ 431 (620)
T 4dg8_A 352 QEIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDL 431 (620)
T ss_dssp CBCCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECTTSCEEEEECSSSEEEETTEEEEH
T ss_pred CCCCCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEECCCCeEEEEccCCCEEEECCEEcCH
Confidence 4448999999999999999999999999998888442 799999999999999999999999999999999998
Q ss_pred CC
Q 026609 235 NW 236 (236)
Q Consensus 235 ~~ 236 (236)
.|
T Consensus 432 ~e 433 (620)
T 4dg8_A 432 PA 433 (620)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 21
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=5.4e-41 Score=285.99 Aligned_cols=226 Identities=29% Similarity=0.436 Sum_probs=195.8
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc---
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--- 81 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--- 81 (236)
...++..++|++++.+|++|..|+...++.++..|+++++.+.+++..+++.+ ++++|.++++|+++..|++....
T Consensus 188 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~ 266 (505)
T 3nyq_A 188 ADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPE 266 (505)
T ss_dssp HHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHH
T ss_pred HHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCch
Confidence 34567889999999999999999977789999999999999999999999999 88999999999999999875322
Q ss_pred CCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCC
Q 026609 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
....++++|.++++|+++++++.+++.+.++ ..+++ .||+||++..+...... ......+|+|+++++++++| ++
T Consensus 267 ~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~~~i~d-~~ 341 (505)
T 3nyq_A 267 LAKALAGARLLVSGSAALPVHDHERIAAATG-RRVIE-RYGMTETLMNTSVRADG--EPRAGTVGVPLPGVELRLVE-ED 341 (505)
T ss_dssp HHHHHHHCSEEEECSSCCCHHHHHHHHHHHS-CCCEE-EEEETTTEEEEECCTTS--CCCTTCCCEECTTCEEEEC----
T ss_pred hhcccccceEEEECCCCCCHHHHHHHHHhcC-Ceeec-ccchhhcccccccCCCC--CCCCCCcccCCCCCEEEEEC-CC
Confidence 1234678999999999999999999999886 78888 99999998766543322 45567899999999999999 56
Q ss_pred CCCCCC---CCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEccc-CCceeeccEEeecCC
Q 026609 162 QKPLPP---NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI-KELIKYKGFQVTSNW 236 (236)
Q Consensus 162 ~~~~~~---g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~-~d~i~~~G~~i~p~~ 236 (236)
+++++. |+.|||+|+|+.++.||+++++.+...|..++||+|||++++++||.+++.||+ ||+||++|++|+|.|
T Consensus 342 g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~dG~l~~~GR~~d~~ik~~G~~v~~~e 420 (505)
T 3nyq_A 342 GTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGE 420 (505)
T ss_dssp --CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEECTTSCEEEEEESSCCCEEETTEEECHHH
T ss_pred CCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEECCCccEEEeCCccCceEEeCCEEECHHH
Confidence 888776 899999999999999999999999999988999999999999999999999998 699999999999865
No 22
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=1.9e-40 Score=288.84 Aligned_cols=227 Identities=25% Similarity=0.389 Sum_probs=199.7
Q ss_pred eeccCCCCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCc--C
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--K 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~ 82 (236)
..++..++|++++.+|++|.+++.. .++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+++.... .
T Consensus 218 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 297 (617)
T 3rg2_A 218 EICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGES 297 (617)
T ss_dssp HHHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCC
T ss_pred HhcCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccc
Confidence 4567889999999999999998854 588999999999999989999999999999999999999999999876433 2
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccC-CCcEEEEEeCCC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDT 161 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~~~~~ 161 (236)
...++++|.+++|||++++++.++|.+.++ ..+++ .||+||++..+...... .......+|+|+ ++.++.++| ++
T Consensus 298 ~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~-~~~~~-~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~~i~d-~~ 373 (617)
T 3rg2_A 298 RAQLASLKLLQVGGARLSATLAARIPAEIG-CQLQQ-VFGMAEGLVNYTRLDDS-AEKIIHTQGYPMCPDDEVWVAD-AE 373 (617)
T ss_dssp TTTTTTCCEEEEESSCCCHHHHHHHHHHTC-SEEEE-EEEETTEEEEECCTTSC-HHHHHHCCCEESCTTCEEEEEC-TT
T ss_pred cccCCCccEEEEcCCcCCHHHHHHHHHHhC-CcEEE-EeccCcceeecccCCCc-ccccccCCCccCCCCceEEEEC-CC
Confidence 337889999999999999999999999986 88888 99999998655432211 112234678887 788999999 68
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++.|+.|||+|+|+.++.||+++++.+...|..++||+|||++++++||.++++||+||+||++|++|+|.|
T Consensus 374 ~~~~p~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~e 448 (617)
T 3rg2_A 374 GNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEE 448 (617)
T ss_dssp SCBCCTTCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSSEEEETTEEEEHHH
T ss_pred CCCCCCCCceEEEecCccccchhcCChhhhhhccCCCCceecCceEEEcCCceEEEEeecCCEEEECCEEeCHHH
Confidence 999999999999999999999999999999999988999999999999999999999999999999999999865
No 23
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=3.7e-40 Score=281.93 Aligned_cols=226 Identities=20% Similarity=0.240 Sum_probs=196.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC---CHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF---DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
++..+++++++.+|++|..++ ..++.++..|+++++.+.. ++..+++.++++++|.+.++|+++..++........
T Consensus 183 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 261 (521)
T 3l8c_A 183 FDVPKQPQMLAQPPYSFDLSV-MYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQA 261 (521)
T ss_dssp TCCCSSCEEECCSCTTSGGGH-HHHHHHHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTT
T ss_pred cCCCCCCeEEecCCccHHHHH-HHHHHHHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccc
Confidence 567788999999999999988 6788899999999998753 899999999999999999999999999888776777
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC---CCCCCCCccccCCCcEEEEEeCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
.++++|.++++|+++++++.+.+.+.+++..+++ .||+||++.+++...... .......+|+|.++++++++| ++
T Consensus 262 ~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~ 339 (521)
T 3l8c_A 262 KMPALTHFYFDGEELTVSTARKLFERFPSAKIIN-AYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIID-ED 339 (521)
T ss_dssp TCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEE-EECCGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEEC-TT
T ss_pred cCccceEEEEecccCCHHHHHHHHHHCCCceEEe-CcCccHHhhhhceeecccccccCCCccccccccCCCEEEEEC-CC
Confidence 8899999999999999999999999997789999 999999988766432211 122345799999999999999 57
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccc---cCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++.|+.|||+|+|+.++.||+++++.+...| +.++||+|||+++++++|++++.||+||+||++|+||+|.|
T Consensus 340 g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~e 417 (521)
T 3l8c_A 340 GKELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELED 417 (521)
T ss_dssp SCBCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECSSSCEEEEEEGGGBCC-----CBHHH
T ss_pred cCCCCCCCceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHH
Confidence 9999999999999999999999999999998877 45689999999999999999999999999999999999964
No 24
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2.2e-39 Score=275.90 Aligned_cols=217 Identities=25% Similarity=0.410 Sum_probs=190.0
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...++..++|++++.+|++|.+|+ ..++.+++.|+++++.+.+++..+++.++++++|.++++|+++..|++......
T Consensus 196 ~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~- 273 (501)
T 3ipl_A 196 KESLGFDRDTNWLSVLPIYHISGL-SVLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEP- 273 (501)
T ss_dssp HHHTCCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSC-
T ss_pred HHhhCCCccCEEEEeCcHHHHHHH-HHHHHHHHcCceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCc-
Confidence 345678899999999999999999 558899999999999999999999999999999999999999999998764433
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
.++|.++++|+++++++.+.+.+. +..+++ .||+||++..+..............+|+|+++++++++|++
T Consensus 274 --~~lr~i~~gG~~l~~~~~~~~~~~--~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~---- 344 (501)
T 3ipl_A 274 --YNLQKILLGGAKLSATMIETALQY--NLPIYN-SFGMTETCSQFLTATPEMLHARPDTVGMPSANVDVKIKNPN---- 344 (501)
T ss_dssp --TTCCEEEECSSCCCHHHHHHHHHT--TCCEEE-EEEEGGGTEEEEEECHHHHHHCTTCCBEECTTCEEEEESCC----
T ss_pred --CcccEEEEeCCCCCHHHHHHHHHh--CCCEec-cccccccccceeecCccccccCCCCCCCCCCCcEEEEecCC----
Confidence 289999999999999999999874 488999 99999998765543332223456789999999999999954
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.|+.|||+|+|+.++.||+++++.+.. + .+|||+|||+++++++|.+++.||+||+||++|++|+|.|
T Consensus 345 --~~~~GEl~v~g~~~~~gY~~~~~~t~~-~-~~g~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~e 412 (501)
T 3ipl_A 345 --KEGHGELMIKGANVMNGYLYPTDLTGT-F-ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQ 412 (501)
T ss_dssp --SSCCEEEEEESTTSCSCCSBSTTCCCS-E-ETTEEEEEEEEEECTTSCEEEEEECCCCEECSSCEECHHH
T ss_pred --CCCccEEEEeccchhhhhCcChhhcch-h-cCCceecCCEEEEcCCCeEEEEccccceEEECCEEECHHH
Confidence 466799999999999999999988877 5 7899999999999999999999999999999999999864
No 25
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=2e-39 Score=279.54 Aligned_cols=219 Identities=19% Similarity=0.222 Sum_probs=190.9
Q ss_pred eeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcC
Q 026609 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 82 (236)
..++..++|++++.+|++|..++ ..++.+++.|+++++.+. +++..+++.++++++|.+.++|+++..|..
T Consensus 216 ~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~----- 289 (563)
T 1amu_A 216 NSLNVTEKDRIGQFASISFDASV-WEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDP----- 289 (563)
T ss_dssp HTSCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCT-----
T ss_pred HhcCCCCCCEEEEeCCccHHHHH-HHHHHHHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHh-----
Confidence 45678899999999999999998 577889999999999875 689999999999999999999999876643
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC-CCCCCCCccccCCCcEEEEEeCCC
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
..++++|.++++|+++++++.+.|.+. ..+++ .||+||++.+++...... ......++|+|+++++++++| ++
T Consensus 290 -~~~~~lr~~~~gG~~l~~~~~~~~~~~---~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~ 363 (563)
T 1amu_A 290 -ERILSIQTLITAGSATSPSLVNKWKEK---VTYIN-AYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVD-EN 363 (563)
T ss_dssp -TTCCSCSEEEEESSCCCHHHHHHHTTT---SEEEE-EECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEEC-TT
T ss_pred -cccccccEEEEEEecCCHHHHHHHHhC---CeEEE-EECcCHHhHhheeeecccccCCCCCcccceeCCCEEEEEC-CC
Confidence 246789999999999999999998875 67888 999999987766533221 123456799999999999999 67
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccC------CCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecC
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~ 235 (236)
+++++.|+.|||+|+|+.++.||+++++.+...|.. ++||+|||++++++||++++.||+||+||++|++|+|.
T Consensus 364 ~~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~dG~l~i~GR~~d~Ik~~G~~V~p~ 443 (563)
T 1amu_A 364 LQLKSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELE 443 (563)
T ss_dssp SCBCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHH
T ss_pred cCCCCCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEcCCCeEEEeccccCEEEECCEEeCHH
Confidence 899999999999999999999999999988877732 46999999999999999999999999999999999996
Q ss_pred C
Q 026609 236 W 236 (236)
Q Consensus 236 ~ 236 (236)
|
T Consensus 444 e 444 (563)
T 1amu_A 444 E 444 (563)
T ss_dssp H
T ss_pred H
Confidence 5
No 26
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=3.5e-39 Score=275.14 Aligned_cols=220 Identities=36% Similarity=0.535 Sum_probs=176.9
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...++..++|++++.+|++|.+|+...+..++..|++ ++...+++..+++.++++++|.++++|+++..|++.. ...
T Consensus 193 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~-~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~ 269 (509)
T 3ivr_A 193 VDAWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGAS-VIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--APA 269 (509)
T ss_dssp HHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEE-EECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC--CGG
T ss_pred HHhhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcE-EEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc--ccc
Confidence 3456788999999999999999995444444554544 4445889999999999999999999999999999876 445
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
.++++|.++.+|++ ++.+.+.+.+++..+++ .||+||++.+++..... .....+|+|+++++++++| +++++
T Consensus 270 ~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~---~~~~~~G~p~~~~~~~i~d-~~~~~ 341 (509)
T 3ivr_A 270 QLASLRAVTGLDTP---ETIERFEATCPNATFWA-TFGQSETSGLSTFAPYR---DRPKSAGRPLFWRTVAVVD-AEDRP 341 (509)
T ss_dssp GGTTCCEEEEECCH---HHHHHHHHHCTTCEEEE-EEEEGGGTEEEEEEEGG---GSTTSCCEECTTCEEEEEC-TTSCB
T ss_pred chhhhheecccCCh---HHHHHHHHhcCCCeEEc-ccCccccccccccCccc---cCCCcccccCCCcEEEEEC-CCCCC
Confidence 67899999999987 88899999997788999 99999999877654432 2234489999999999999 56999
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEccc--CCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI--KELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~--~d~i~~~G~~i~p~~ 236 (236)
+++|+.|||+|+|+.++.||+++++.+...| .+|||+|||++++++||++++.||+ ||+||++|++|+|.|
T Consensus 342 ~~~g~~GEl~v~g~~~~~gY~~~~~~t~~~f-~~g~~~TGDl~~~~~dG~l~~~GR~d~~d~ik~~G~~v~p~e 414 (509)
T 3ivr_A 342 LPPGEVGEIVLRGPTVFKGYWNNAAATQHAF-RNGWHHTGDMGRFDADGYLFYAGRAPEKELIKTGGENVYPAE 414 (509)
T ss_dssp CCTTCCEEEEEESTTSCCEETTCHHHHHHHT-GGGSEEEEEEEEECTTSCEEEEEEC-----------------
T ss_pred CCCCCceEEEEecCCccccccCCHHHhHHHh-hcCCcccccEEEECCCceEEEeCCCCcceeEEECCEEECHHH
Confidence 9999999999999999999999999999988 5899999999999999999999999 999999999999986
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=4.4e-40 Score=285.30 Aligned_cols=228 Identities=26% Similarity=0.336 Sum_probs=194.7
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcCceEEEeChHHHHHHHhcC-
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILALAKHG- 79 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~- 79 (236)
...++..++|++++++|++|.+|+...++.+++.|+++++.+++ ++..+++.++++++|.+.++|+++..+++..
T Consensus 200 ~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~ 279 (590)
T 3kxw_A 200 FTSFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIR 279 (590)
T ss_dssp HHHTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCC
T ss_pred HHhhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhh
Confidence 34567889999999999999999965688999999999998865 7899999999999999999999999988753
Q ss_pred --CcCCCCCCCceEEeecCCCCCHHHHHHHHHhCC-----CCceeeccccccccccccccccCC----------------
Q 026609 80 --LVKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQVGYGLTETSGIATMENSF---------------- 136 (236)
Q Consensus 80 --~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~v~~~~YG~tE~g~~~~~~~~~---------------- 136 (236)
.....+++++|.++++|+++++++.++|.+.++ +..+++ .||+||++.+++.....
T Consensus 280 ~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (590)
T 3kxw_A 280 EEKKEGLDLSSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYP-CYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDH 358 (590)
T ss_dssp GGGGTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEE-EEECGGGSSEEEECCTTSCCCEEEECSCCCSSS
T ss_pred hhhccCCCchhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCcccccc-ccccccccceeecccCCCCceeeeecHHHHhcC
Confidence 335567899999999999999999999999874 246888 99999998876643211
Q ss_pred ---------CCCCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccC------CC--
Q 026609 137 ---------AGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK------KG-- 199 (236)
Q Consensus 137 ---------~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~------~~-- 199 (236)
........+|+|+++ ++++|++++++++.|+.|||+|+|+.++.||+++++.+...|.. +|
T Consensus 359 ~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~ 436 (590)
T 3kxw_A 359 RVHFADDNSPGSYKLVSSGNPIQE--VKIIDPDTLIPCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAI 436 (590)
T ss_dssp BCCBCCTTCTTCEEEECCCEESSE--EEEECTTTCCBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CC
T ss_pred ceeeccCCCCCcceEeccCCCCCC--eEEEcCCCCcCCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCc
Confidence 001223567899998 78899877999999999999999999999999999999888843 24
Q ss_pred eEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 200 WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 200 ~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
||+|||+++++ +|.+++.||+||+||++|+||+|.|
T Consensus 437 ~~~TGDlg~~d-dG~l~~~GR~dd~Ik~~G~~v~p~e 472 (590)
T 3kxw_A 437 YLRTGDLGFLH-ENELYVTGRIKDLIIIYGKNHYPQD 472 (590)
T ss_dssp BEEEEEEEEEE-TTEEEEEEESSCHHHHHHHTTHHHH
T ss_pred EEecCcEEEEE-CCEEEEEcCccceEEECCEecCHHH
Confidence 99999999998 9999999999999999999999865
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=1.3e-38 Score=275.30 Aligned_cols=225 Identities=25% Similarity=0.398 Sum_probs=193.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC---
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--- 80 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--- 80 (236)
+++.++|++++.+|++|.+|+...++.++..|+++++.+. +++..+++.++++++|.++++|+++..+.+...
T Consensus 213 ~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 292 (576)
T 3gqw_A 213 IKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKD 292 (576)
T ss_dssp SCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHH
T ss_pred cCCCCcceEEEcCCccccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccc
Confidence 6788999999999999999997778889999999998764 578899999999999999999999988876532
Q ss_pred cCCCCCCCceEEeecCCCCCHHHHHHHHHhCC-----CCceeeccccccccccccccccCCCCC----------------
Q 026609 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQVGYGLTETSGIATMENSFAGS---------------- 139 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~v~~~~YG~tE~g~~~~~~~~~~~~---------------- 139 (236)
....+++++|.++++|+++++++.++|.+.++ +..+++ .||+||++.+++........
T Consensus 293 ~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 371 (576)
T 3gqw_A 293 LAELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMP-CYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKA 371 (576)
T ss_dssp HTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEE-EEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBC
T ss_pred cccCChhhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccccc-cCCcccccceeecccccCCccccccchhhhcccCcc
Confidence 24557899999999999999999999999874 478888 99999998877653221100
Q ss_pred ----------CCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEE
Q 026609 140 ----------RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF 209 (236)
Q Consensus 140 ----------~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~ 209 (236)
.....+|+|+++++++++| ++++++++|+.|||+|+|+.++.||+++++.+...+ .+|||+|||++++
T Consensus 372 ~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~ 449 (576)
T 3gqw_A 372 VAPGAETRAVSTFVNCGKALPEHGIEIRN-EAGMPVAERVVGHICISGPSLMSGYFGDQVSQDEIA-ATGWLDTGDLGYL 449 (576)
T ss_dssp CCCCTTCCCEEEEEBCCEECTTCEEEEEC-TTSCBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHH-HHSCEEEEEEEEE
T ss_pred cccCccccCccceeecCCcCCCCeEEEEC-CCCCCCCCCCeEEEEEeCccccccccCCcccccccc-CCCeeeccceEEE
Confidence 0112689999999999999 789999999999999999999999999988776644 7899999999999
Q ss_pred cCCCcEEEEcccCCceeeccEEeecCC
Q 026609 210 DGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 210 ~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+||.+++.||+||+||++|++|+|.|
T Consensus 450 -~dG~l~~~GR~dd~ik~~G~~v~p~e 475 (576)
T 3gqw_A 450 -LDGYLYVTGRIKDLIIIRGRNIWPQD 475 (576)
T ss_dssp -ETTEEEEEEETTTCEEETTEEECHHH
T ss_pred -ECCEEEEEecCcceEEECCEEECHHH
Confidence 79999999999999999999999865
No 29
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=4.2e-38 Score=271.47 Aligned_cols=220 Identities=18% Similarity=0.218 Sum_probs=177.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCC-HHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCCC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD-LEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~-~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 86 (236)
+.....+++++..|++|..++ ..++.++..|+++++.+.+. +..+++.++++++|.+.++|++++.+... ..++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~----~~~~ 293 (562)
T 3ite_A 219 LELGGVGKFLCLASRAFDVHI-GEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV----PEDA 293 (562)
T ss_dssp GGCTTTCEEECCSCTTSTHHH-HHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC----GGGS
T ss_pred cccCcCceEEEecCchhhhhH-HHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC----cccc
Confidence 456778999999999999888 67788999999999987544 56788999999999999999988876433 3467
Q ss_pred CCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCCC
Q 026609 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 166 (236)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~ 166 (236)
+++|.++++|+++++++.+.|.+.++ ..+++ .||+||++..+....... ......+|+|+++++++++|++++++++
T Consensus 294 ~~lr~~~~gG~~l~~~~~~~~~~~~~-~~~~~-~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~i~d~~~~~~~~ 370 (562)
T 3ite_A 294 PHLVYLGVGGEKMTPRTQQIWSSSDR-VALVN-VYGPTEVTIGCSAGRILP-DSDTRCIGHPLGDSVAHVLAPGSNEHVK 370 (562)
T ss_dssp TTCCEEEEESSCCCHHHHHHHTTCSS-CEEEE-EECCGGGCSCSEEEECCT-TSCTTEEEEECTTCEEEEECTTSSCBCC
T ss_pred CceEEEEEecCCCCHHHHHHHhhCCC-cEEEE-eeccchheeeeeeeeecC-CCCCccccccCCCCeEEEEeCCCCCCCC
Confidence 89999999999999999999998775 88888 999999987766543322 3445679999999999999988899999
Q ss_pred CCCceEEEEecCccchhhcCCcccccccccCCC--eEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 167 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKG--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 167 ~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+|+.|||+|+|+.++.||+++++.+...+ .+| ||+|||++++|+||++++.||+||+||++|+||+|.|
T Consensus 371 ~g~~GEl~v~g~~v~~GY~~~p~~t~~~~-~~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~v~p~e 441 (562)
T 3ite_A 371 KGMAGELVIEGSLVANGYLNRPDAKGFCD-INGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQRLELGE 441 (562)
T ss_dssp TTSCEEEEEESTTSCCEESSCTTCCSEEE-ETTEEEEEEEEEEEECTTSCEEEEEEC---------------
T ss_pred CCCceEEEEeccccchhhCCCcccccccc-CCCCEEEecCCEEEEcCCCeEEEEccccCEEeECcEEECHHH
Confidence 99999999999999999999999887665 344 9999999999999999999999999999999999986
No 30
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=7e-38 Score=291.82 Aligned_cols=227 Identities=19% Similarity=0.199 Sum_probs=198.7
Q ss_pred eeeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC---CCHHHHHHHHHhcCceEEEeChHHHHHHHhcCC
Q 026609 4 MDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (236)
Q Consensus 4 ~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~ 80 (236)
....++..++|++++.+|+.|..+. ..++.++..|+++++.+. .++..+.+.++++++|+++++|++++.|.+...
T Consensus 638 ~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~ 716 (1304)
T 2vsq_A 638 HVDYMAFSDQDTFLSVSNYAFDAFT-FDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGE 716 (1304)
T ss_dssp SCCSSCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCS
T ss_pred HHHhcCCCCCCEEEEECCccHHHHH-HHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhch
Confidence 3456778899999999999999887 788999999999999874 689999999999999999999999999987532
Q ss_pred cCCCCCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCC--CCCCCCCccccCCCcEEEEEe
Q 026609 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFA--GSRNIGSAGALAPGVEALIVS 158 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~--~~~~~~~~g~p~~~~~~~~~~ 158 (236)
..++++|.+++|||++++++.+.|.+.++...+++ .||+||++.+++...... .......+|+|++++++.++|
T Consensus 717 ---~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n-~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d 792 (1304)
T 2vsq_A 717 ---DWMKGLRCILFGGERASVPHVRKALRIMGPGKLIN-CYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILN 792 (1304)
T ss_dssp ---HHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEE-EECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEEC
T ss_pred ---hcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEE-eEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEEC
Confidence 23578999999999999999999999887678888 999999988776543221 123445799999999999999
Q ss_pred CCCCCCCCCCCceEEEEecCccchhhcCCccccccccc------CCCeEecCceEEEcCCCcEEEEcccCCceeeccEEe
Q 026609 159 VDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 232 (236)
Q Consensus 159 ~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i 232 (236)
+.++++|.|+.|||+|+|++++.||+++++.+...|. .++||+|||++++++||.++|+||+||+||++|++|
T Consensus 793 -~~~~~~p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~ri 871 (1304)
T 2vsq_A 793 -EQSQLQPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRI 871 (1304)
T ss_dssp -TTSCBCCTTCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEE
T ss_pred -CCcCCCCCCCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEee
Confidence 5789999999999999999999999999999988873 245999999999999999999999999999999999
Q ss_pred ecCC
Q 026609 233 TSNW 236 (236)
Q Consensus 233 ~p~~ 236 (236)
.|.|
T Consensus 872 e~~e 875 (1304)
T 2vsq_A 872 ELEE 875 (1304)
T ss_dssp EHHH
T ss_pred CHHH
Confidence 9865
No 31
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=1.2e-36 Score=257.73 Aligned_cols=204 Identities=21% Similarity=0.375 Sum_probs=176.0
Q ss_pred CcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcCceEEEeChHHHHHHHhc----CCcCCC
Q 026609 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILALAKH----GLVKKF 84 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----~~~~~~ 84 (236)
+|++++.+|++|.+|+...++.+++.|+++++.++. ++..+++.++++++| +.++|+++..++.. ......
T Consensus 230 ~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~ 308 (480)
T 3t5a_A 230 NSALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGR 308 (480)
T ss_dssp TEEEEECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTC
T ss_pred CCeEEEeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCccccccc
Confidence 899999999999999877889999999999998753 899999999999999 88899988888764 334566
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCC-----CCceeeccccccccccccccccCCCC---------------------
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQVGYGLTETSGIATMENSFAG--------------------- 138 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~v~~~~YG~tE~g~~~~~~~~~~~--------------------- 138 (236)
+++++|.++++|+++++++.++|.+.++ ...+.+ .||+||++.+++.......
T Consensus 309 ~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~-~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 387 (480)
T 3t5a_A 309 DLGNILTILSGSERVQAATIKRFADRFARFNLQERVIRP-SYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAG 387 (480)
T ss_dssp CCTTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEE-EEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCS
T ss_pred chhhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhccc-cccccccceeEeecccCCCcceEEecHHHhccCceeecCC
Confidence 7899999999999999999999999984 346888 9999999987765432211
Q ss_pred --CCCCCCccccCCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCccccccccc-----------CCCeEecCc
Q 026609 139 --SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-----------KKGWVHTGD 205 (236)
Q Consensus 139 --~~~~~~~g~p~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~TgD 205 (236)
......+|+|++ ++++++|++++++++.|+.|||+|+|+.++.||+++++.+...|. .++||+|||
T Consensus 388 ~~~~~~~~~G~p~~-~~~~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGD 466 (480)
T 3t5a_A 388 GGATSLISYMLPRS-PIVRIVDSDTCIECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGD 466 (480)
T ss_dssp SSCEEEECEECCSS-SEEEEEETTTTEECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEE
T ss_pred CCcceeeecCcccC-CEEEEEcCCCCcCCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeeccc
Confidence 122347899999 999999987789999999999999999999999999999988884 467999999
Q ss_pred eEEEcCCCcEEEEcc
Q 026609 206 LGYFDGDGQLYVVDR 220 (236)
Q Consensus 206 ~~~~~~~g~~~~~GR 220 (236)
+|+++ ||+++|+||
T Consensus 467 lg~~d-dG~l~~~GR 480 (480)
T 3t5a_A 467 SGFVT-DGKMFIIGR 480 (480)
T ss_dssp EEEEE-TTEEEECC-
T ss_pred eeeEE-CCEEEEeCC
Confidence 99996 999999998
No 32
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=2e-35 Score=247.42 Aligned_cols=210 Identities=17% Similarity=0.144 Sum_probs=177.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC--
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD-- 85 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-- 85 (236)
.+..++|++++.+|+.|..+....++.++..|+++++.+.+++..+++.++++++|+++++|+++..|++.......+
T Consensus 125 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 204 (436)
T 3qov_A 125 VGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPR 204 (436)
T ss_dssp TTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTT
T ss_pred cCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcc
Confidence 478899999999999776666577889999999999998889999999999999999999999999998875444433
Q ss_pred CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCCC
Q 026609 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 165 (236)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 165 (236)
++++|.+++||+++++++.+.|.+.|+ +.+++ .||+||+++.+....+. .....+.|.+++.++++|+++++++
T Consensus 205 ~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~-~YG~TE~~~~~~~~~~~----~~~g~~~~~~~~~v~i~d~~~g~~~ 278 (436)
T 3qov_A 205 ETTLKTLVIGAEPHTDEQRRKIERMLN-VKAYN-SFGMTEMNGPGVAFECQ----EQNGMHFWEDCYLVEIIDPETGEPV 278 (436)
T ss_dssp SSSCCEEEEESSCCCHHHHHHHHHHHT-SEEEE-EEEEGGGTEEEEEEECT----TCSSEEECTTTEEEEEECTTTCSBC
T ss_pred cCCccEEEEeCCcCCHHHHHHHHHHhC-ccEEe-cCcchhhcCCeeEEecC----CCCeeEEccCceEEEEEECCCCCCC
Confidence 789999999999999999999999996 88999 99999995442222221 1123667888999999998899999
Q ss_pred CCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCC------c---EEEEcccCCceeeccEEeecCC
Q 026609 166 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDG------Q---LYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 166 ~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g------~---~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
++|+.|||+|++.+ ...+ ..+||+|||+++++++| . +++.||.||+||++|++|+|.|
T Consensus 279 ~~g~~Gel~v~~~~------------~~~~-~~~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~e 345 (436)
T 3qov_A 279 PEGEIGELVLTTLD------------REMM-PLIRYRTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQ 345 (436)
T ss_dssp STTCCEEEEEEESS------------CCSS-CCCSEEEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHH
T ss_pred CCCCceEEEEeccC------------cCCc-eEEEEEcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHH
Confidence 99999999999842 2223 67899999999999998 5 6999999999999999999864
No 33
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=2.6e-34 Score=240.75 Aligned_cols=209 Identities=19% Similarity=0.190 Sum_probs=174.2
Q ss_pred eccCCCCcEEEEecCh-hhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 7 ETAGELDYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
.++..++|++++.+|+ +|..++ ..++.++..|+++++.+.+++..+++.++++++|+++++|+++..|++.......+
T Consensus 128 ~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~ 206 (437)
T 2y27_A 128 AAGARRGDKVHVSYGYGLFTGGL-GAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLD 206 (437)
T ss_dssp HTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHTTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC
T ss_pred HcCCCCCCEEEEcccccccccch-HHHHHHHHcCCEEEeCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCC
Confidence 3667889999999998 677777 56788999999999988889999999999999999999999999998765433333
Q ss_pred --CCCceEEeecCCCCCHHHHHHHHHhCCCCceeecccccccc-cc-ccccccCCCCCCCCCCccccCCCcEEEEEeCCC
Q 026609 86 --LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTET-SG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDT 161 (236)
Q Consensus 86 --l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~-g~-~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~ 161 (236)
++++|.+++||+++++++.+.+.+.++ ..+++ .||+||+ +. ++..+. . .....+.|.+++.++++|+++
T Consensus 207 ~~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~-~YG~TE~~g~~~~~~~~-~----~~~g~~~~~~~~~~~i~d~~~ 279 (437)
T 2y27_A 207 PVQSSLRIGIFGAEPWTNDMRVAIEQRMG-IDAVD-IYGLSEVMGPGVASECV-E----TKDGPTIWEDHFYPEIIDPET 279 (437)
T ss_dssp GGGSSCCEEEEESSCCCHHHHHHHHHHHT-SEEEE-EEEETTTTEEEEEECCT-T----TCSSCEECTTTEEEEEECTTT
T ss_pred cccCCeeEEEEcCccCCHHHHHHHHHHHC-cCEEe-cCCchhhcCCeeEEecC-C----CCCceeEccCceEEEEEcCCC
Confidence 478999999999999999999999886 88998 9999998 44 333221 1 111256678899999999878
Q ss_pred CCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcC-CCcE-----EEEcccCCceeeccEEeecC
Q 026609 162 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG-DGQL-----YVVDRIKELIKYKGFQVTSN 235 (236)
Q Consensus 162 ~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~-~g~~-----~~~GR~~d~i~~~G~~i~p~ 235 (236)
++++++|+.|||++++.+ ...+ +.+||+|||++++++ +|++ ++.||.||+||++|++|+|.
T Consensus 280 g~~~~~g~~Gel~v~~~t------------~~~~-~~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~ 346 (437)
T 2y27_A 280 GEVLPDGELGELVFTSLT------------KEAL-PIIRYRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPT 346 (437)
T ss_dssp CCBCCTTCCEEEEEEESS------------CSSS-CCCSEEEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHH
T ss_pred CCCCCCCCccEEEEecCC------------cCCc-hhheeecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHH
Confidence 999999999999999732 2233 578999999999998 6985 89999999999999999986
Q ss_pred C
Q 026609 236 W 236 (236)
Q Consensus 236 ~ 236 (236)
|
T Consensus 347 e 347 (437)
T 2y27_A 347 Q 347 (437)
T ss_dssp H
T ss_pred H
Confidence 4
No 34
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=3.3e-34 Score=240.54 Aligned_cols=210 Identities=21% Similarity=0.206 Sum_probs=174.0
Q ss_pred eccCCCCcEEEEecCh-hhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCCC
Q 026609 7 ETAGELDYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 85 (236)
.++..++|++++.+|+ +|..++ ...+.++..|+++++.+.+++..+++.++++++|+++++|+++..|++.......+
T Consensus 130 ~~~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~ 208 (443)
T 2y4o_A 130 AAGGRPGDTLHNAFGYGLFTGGL-GIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMD 208 (443)
T ss_dssp HTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHHTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC
T ss_pred HcCCCCCCEEEEeccCcccccHH-HHHHHHHHcCCEEEECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCC
Confidence 4677889999999998 566666 56788999999999988889999999999999999999999999998765433333
Q ss_pred --CCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccc-cccccCCCCCCCCCCccccCCCcEEEEEeCCCC
Q 026609 86 --LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGI-ATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 162 (236)
Q Consensus 86 --l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~-~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~ 162 (236)
++++|.+++||+++++++.+.+.+.++ ..+++ .||+||+++. .+..... .....+.|.+++.++++|++++
T Consensus 209 ~~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~-~YG~TE~~g~~~~~~~~~----~~~g~~~~~~~~~~~i~d~~~g 282 (443)
T 2y4o_A 209 PAESSLKIGIFGAEPWTQALRNEVETRVG-IDALD-IYGLSEVMGPGVACECVE----TKDGPVIWEDHFYPEIIDPVTG 282 (443)
T ss_dssp GGGSSCCEEEEESSCCCHHHHHHHHHHHT-CEEEE-EEEETTTTEEEEEEECTT----TCCSEEECTTTEEEEEECTTTC
T ss_pred cccCCceEEEECCCcCCHHHHHHHHHHhC-cCEEe-ccCchhhcCCeEEeccCC----CCCceEEccCCeEEEEEcCCCC
Confidence 479999999999999999999999886 88888 9999997432 2222111 1112555778999999998789
Q ss_pred CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCC-CcE-----EEEcccCCceeeccEEeecCC
Q 026609 163 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD-GQL-----YVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 163 ~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~-g~~-----~~~GR~~d~i~~~G~~i~p~~ 236 (236)
+++++|+.|||+|++.+ ...+ +.+||+|||+++++++ |.+ ++.||.||+||++|++|+|.|
T Consensus 283 ~~~~~G~~Gel~v~~~t------------~~~~-p~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~e 349 (443)
T 2y4o_A 283 EVLPDGSQGELVFTSLT------------KEAM-PVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQ 349 (443)
T ss_dssp CBCCTTCCEEEEEEESS------------CSSS-CCSSEEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHH
T ss_pred CCCCCCCceEEEEeCCC------------cccC-hhheeecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHH
Confidence 99999999999999732 2233 5789999999999999 986 899999999999999999864
No 35
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=1e-33 Score=231.22 Aligned_cols=195 Identities=16% Similarity=0.195 Sum_probs=163.0
Q ss_pred eeeccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCCCHHHHHHHHHhcCceEEEeChHHHHHHHhcCCcCCC
Q 026609 5 DQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (236)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 84 (236)
...+++.++|++++++|++|.+|+ ..++.++..|+++++.++. ...++.++++++|++.++|+++..|++... ...
T Consensus 70 ~~~~~~~~~d~~l~~~pl~h~~gl-~~~~~~l~~g~~~~~~~~~--~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~-~~~ 145 (358)
T 4gs5_A 70 GKALSLGPGTRALVCLNVGYIAGL-MMLVRGMELDWELTVTEPT--ANPLAGLDHADFDFVAMVPMQLQSILENSA-TSG 145 (358)
T ss_dssp HHHTTCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEEECCC--SCTTTTCSSCCCSEEEECHHHHHHHHHCTT-TGG
T ss_pred HHHhCCCCCCEEEEECChHHHHHH-HHHHHHHHhCcEEEecCcc--ccHHHHHHHhCCeEEEcChHHHHHhhcccc-ccc
Confidence 456788999999999999999999 5678888899999887642 123567899999999999999999998765 444
Q ss_pred CCCCceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCCCC
Q 026609 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 164 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~ 164 (236)
+++++|.+++||+++++++.+++++. +.++++ .||+||++..+...... ....+.++.+.|++.+.+.+
T Consensus 146 ~l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~-~YG~TEt~~~~~~~~~~--~~~~g~~~~~~pgv~~~~~~------ 214 (358)
T 4gs5_A 146 QVDRLGKVLLGGAPVNHALAMQISDL--AMPVYQ-SYGMTETVSHVALKALN--GPEASELYVFLPGIQYGVDE------ 214 (358)
T ss_dssp GGGGGCSEEECSSCCCHHHHHHHHTC--SSCEEE-EEECGGGSSEEEEEECS--STTCCSCEEECTTCEEEECT------
T ss_pred cCCcceEEEEcccCCCchheeccccc--CceEEe-ccccccccceeeccccc--ccccceeeccCCCeEEEecC------
Confidence 78899999999999999999999875 488988 99999998876654433 34467788999999887643
Q ss_pred CCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCCCcEEEEcccCCceeeccEEeecCC
Q 026609 165 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 236 (236)
Q Consensus 165 ~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 236 (236)
.||++++++.. .+|||+|||+++++++| +.++||+||+||++|+||+|.|
T Consensus 215 -----~Gel~~~g~~~----------------~~g~~~TGDlg~~d~~g-~~~~GR~dd~Ik~~G~~v~p~e 264 (358)
T 4gs5_A 215 -----RGCLHISGAVT----------------NGQTVQTNDLVEIHGNA-FQWIGRADNVINSGGVKIVLDQ 264 (358)
T ss_dssp -----TSEEEEESGGG----------------TTCCEEEEEEEEECSSE-EEEEEEGGGEEEETTEEEEHHH
T ss_pred -----cCceEEecccc----------------cCcceecCCccccccCc-eEEcccccCeEEECCEEECHHH
Confidence 48999988632 57899999999999887 7778999999999999999975
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.95 E-value=3.2e-27 Score=193.63 Aligned_cols=201 Identities=16% Similarity=0.164 Sum_probs=152.1
Q ss_pred eeccCCCCcEEEEecCh-hhHHhHHHHHHHHhhcCcEEEEcCCCCHH-----------------------HHHHHHHhcC
Q 026609 6 QETAGELDYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMAKFDLE-----------------------MFLRAIEKHR 61 (236)
Q Consensus 6 ~~~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~~~~~~~~~~-----------------------~~~~~i~~~~ 61 (236)
...+..++|++++.+|+ +|..|+ ...+.++..|+ +++...+++. .+++.+++++
T Consensus 128 ~~~~~~~~d~~l~~~p~g~~~~g~-~~~~~~~~~G~-~v~~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 205 (369)
T 3hgu_A 128 QHRPGRPSGNTLAAIPTGPHIVGA-INKERALRLGG-MFFSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQD 205 (369)
T ss_dssp TTSTTCCCCEEEECSCCTTCHHHH-HHHHHHHHTTS-CEECCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HhhCCCCcceEEEecCCCchhhhH-HHHHHHHHcCC-EEECccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCC
Confidence 34567889999999999 999999 45566688899 6666677777 8888999999
Q ss_pred ceEEEeChHHHHHHHhcCCcCCCCCCCceEEeecCCCCCHHHHHHHH-HhCCCCceeeccccccccccccccccCCCCCC
Q 026609 62 VTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECA-KNVPSATVIQVGYGLTETSGIATMENSFAGSR 140 (236)
Q Consensus 62 ~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~-~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~ 140 (236)
+|+++++|+++..|++........++++|.+++||+++++++.+.+. +.||+..+++ .||+||++.++..+..
T Consensus 206 ~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~-~YG~TE~~~~~~~~~~----- 279 (369)
T 3hgu_A 206 IRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNLDEIKFIASEILPDCEFSA-SYGSTSALGVSRSLLI----- 279 (369)
T ss_dssp EEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCHHHHHHHHHHTCTTSEEEE-EEEEGGGTEEEEECCB-----
T ss_pred CCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCHHHHHHHHHHhCCCcEEEc-ccCchhhhcceecccc-----
Confidence 99999999999999877543334567899999999999999999999 8997689999 9999999876643211
Q ss_pred CCCCcccc------CCCcEEEEEeCCCCCCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcCC--
Q 026609 141 NIGSAGAL------APGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD-- 212 (236)
Q Consensus 141 ~~~~~g~p------~~~~~~~~~~~~~~~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~~-- 212 (236)
..+|+| .++++++++|+++++++++|+.|||+|++.... .+ -.+|+|||++++.+.
T Consensus 280 --~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~~GEl~vt~l~~~------------~~--l~ry~tgD~~~~~~~~~ 343 (369)
T 3hgu_A 280 --TSESQQVIYDSFSPFITYDVVDSITAQTVEYGERGNVIVTHLSPW------------AF--YPRVAERDTAIRLPGVS 343 (369)
T ss_dssp --CTTCSSCEEECCTTTEEEEEECTTTCSBCCTTCEEEEEEEEEETT------------EE--EEEEEEEEEEEEECCST
T ss_pred --ccCCCcccccCCCCCeEEEEECCCCCcCCCCCCceEEEEEEcCcc------------cc--cccccCCceEEEecCCC
Confidence 146777 999999999977899999999999999873211 11 124999999987433
Q ss_pred C-------cEEEEcccCCceeeccE
Q 026609 213 G-------QLYVVDRIKELIKYKGF 230 (236)
Q Consensus 213 g-------~~~~~GR~~d~i~~~G~ 230 (236)
| .+..++|.++..++.|.
T Consensus 344 g~~~d~~~~v~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 344 GFAGDRLADIEPLKISEGRKVIEGV 368 (369)
T ss_dssp TCSSCEEEEEEECC-----------
T ss_pred CCcCcccccceeccccCCCceeeec
Confidence 3 26677888888888774
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=98.61 E-value=4.6e-08 Score=83.49 Aligned_cols=128 Identities=13% Similarity=0.120 Sum_probs=78.1
Q ss_pred CCC---ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCccccCCCcEEEEEeCCCC
Q 026609 86 LSS---LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ 162 (236)
Q Consensus 86 l~~---lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~ 162 (236)
+|. +..++.||-.. -.+.++..+|+..+....|++||+ .++....+.......+..-.| ...-++.++.+..
T Consensus 296 WPnl~~l~~~~~G~~~~---Y~~~l~~~~g~~p~~~~~Y~ASEg-~~gi~~~p~~~~~~~~~~L~~-~~~ffEFip~~~~ 370 (581)
T 4eql_A 296 WPNTKYIETVVTGSMGQ---YVPMLNYYCNDLPLVSTTYGSSET-TFGINLDPLCKPEDVSYTFMP-NMSYFEFIPMDGG 370 (581)
T ss_dssp STTCCEEEEECSGGGGG---GHHHHHHHHTTCCEECCEEECSSC-EEEECSCTTSCGGGCCEEECT-TSSEEEEEECSTT
T ss_pred CCCCcEEEEEcCCChHH---HHHHHHHHcCCCccccCccccccc-eeeeccCCCCCcccCceeecC-CcEEEEEEecccc
Confidence 456 55566666322 334444555557777349999995 444332211000111111112 2255566653322
Q ss_pred --------CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcC----CCcEEEEcccCCceeeccE
Q 026609 163 --------KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG----DGQLYVVDRIKELIKYKGF 230 (236)
Q Consensus 163 --------~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~----~g~~~~~GR~~d~i~~~G~ 230 (236)
..+..|+.+||+|++.+ |.| .|++||+.+... ..++.|.||.++++++.|+
T Consensus 371 ~~~~~v~l~eVe~G~~YelViTt~~---GL~--------------RYr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Ge 433 (581)
T 4eql_A 371 DKNDVVDLEDVKLGCTYEPVVTNFA---GLY--------------RMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSD 433 (581)
T ss_dssp CCSSCEEGGGCCTTCEEEEEEECSS---SCC--------------SEECCEEEEEEEEETTEEEEEEEEETTEEECSSSC
T ss_pred CCCcEeCHHHcCCCceEEEEEeecc---cee--------------eEEcCCEEEEcccCCCCcEEEEEEecCCEEEeeee
Confidence 23568999999998752 222 299999998864 4679999999999999999
Q ss_pred EeecC
Q 026609 231 QVTSN 235 (236)
Q Consensus 231 ~i~p~ 235 (236)
|++++
T Consensus 434 kl~~~ 438 (581)
T 4eql_A 434 KTNEE 438 (581)
T ss_dssp CEEHH
T ss_pred ECCHH
Confidence 99875
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.61 E-value=3.4e-08 Score=84.49 Aligned_cols=127 Identities=13% Similarity=0.086 Sum_probs=77.7
Q ss_pred CCC---ceEEeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCcc-ccC-CCcEEEEEeCC
Q 026609 86 LSS---LKLVGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSAG-ALA-PGVEALIVSVD 160 (236)
Q Consensus 86 l~~---lr~i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~g-~p~-~~~~~~~~~~~ 160 (236)
+|. +..++.||-.. -.+.++..+++..+....|++||. .++....+. ..++..+ ..+ ...-++.++.+
T Consensus 301 WPnlk~l~~~~tG~~~~---Y~~~l~~~~g~~p~~~~~Y~ASEg-~~gi~~~p~---~~p~~~~~~L~p~~~ffEFIP~~ 373 (609)
T 4b2g_A 301 WPNTKYLDVIVTGAMAQ---YIPTLDYYSGGLPLACTMYASSEC-YFGLNLNPM---SKPSEVSYTIMPNMAYFEFLPHE 373 (609)
T ss_dssp STTCCEEEEECSGGGGG---GHHHHHHHHTSCCEECCEEECSSC-EEEECSCTT---SCGGGCCEEECTTSCEEEEEEGG
T ss_pred CCCCcEEEEEccCChHH---HHHHHHHHcCCCccccCcccccce-eeeeecCCC---CCcccCceeecCCcEEEEEEecc
Confidence 556 44555565322 234444555556677449999996 444432211 1111111 111 22455566433
Q ss_pred CC---------------CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcC----CCcEEEEccc
Q 026609 161 TQ---------------KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG----DGQLYVVDRI 221 (236)
Q Consensus 161 ~~---------------~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~----~g~~~~~GR~ 221 (236)
+. ..+..|+.+||+|++.. |+| .|++||+++... ..++.|.||.
T Consensus 374 ~~~~~~~~~~~~~~v~l~eVe~G~~YelViTt~~---GL~--------------RYr~GD~v~v~~f~~~~p~i~~~gR~ 436 (609)
T 4b2g_A 374 HSSIPLSRDSPPRLVDLAHVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFHFVRRK 436 (609)
T ss_dssp GTTSCCCSSSCCCCEEGGGCCTTCEEEEEEECTT---SCC--------------SEEEEEEEEEEEEETTEEEEEEEEET
T ss_pred ccccccccCCCCccccHhHcCCCCeEEEehhhhh---hhh--------------heecCCEEEEeecCCCCcEEEEEEec
Confidence 22 24678999999997642 222 299999998863 4789999999
Q ss_pred CCceeeccEEeecCC
Q 026609 222 KELIKYKGFQVTSNW 236 (236)
Q Consensus 222 ~d~i~~~G~~i~p~~ 236 (236)
+++|++.|+||++.|
T Consensus 437 ~~~l~~~Geki~~~~ 451 (609)
T 4b2g_A 437 NVLLSIDSDKTDEAE 451 (609)
T ss_dssp TCCBCSSSCCBCHHH
T ss_pred CCeEEccccCCCHHH
Confidence 999999999998753
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=98.50 E-value=1.7e-07 Score=79.91 Aligned_cols=128 Identities=16% Similarity=0.071 Sum_probs=76.2
Q ss_pred CCCCceE--EeecCCCCCHHHHHHHHHhCCCCceeeccccccccccccccccCCCCCCCCCCc-cccCC-CcEEEEEeCC
Q 026609 85 DLSSLKL--VGSGAAPLGKELMEECAKNVPSATVIQVGYGLTETSGIATMENSFAGSRNIGSA-GALAP-GVEALIVSVD 160 (236)
Q Consensus 85 ~l~~lr~--i~~~G~~~~~~~~~~~~~~~~~~~v~~~~YG~tE~g~~~~~~~~~~~~~~~~~~-g~p~~-~~~~~~~~~~ 160 (236)
-+|.+|+ ++.+|. + ..-.+.++..+++..+....|++||. .++....+. ..++.. ...+| ..-++.++.+
T Consensus 300 lWPnl~~i~~~~~G~-~-~~Y~~~l~~~~g~~p~~~~~Y~ASEg-~~gi~~~p~---~~~~~~~~~L~p~~~ffEFiP~~ 373 (581)
T 4epl_A 300 LFPNAKYVYGIMTGS-M-EPYVPKLRHYAGDLPLVSHDYGSSEG-WIAANVTPR---LSPEEATFAVIPNLGYFEFLPVS 373 (581)
T ss_dssp HCTTCCCEEEECSGG-G-GGGHHHHHHHHTTSCEEECCEEETTE-EEEECCCTT---SCTTTCCEEECTTSCEEEEEEC-
T ss_pred hCCCCceEEEEeCCC-h-HHHHHHHHHHcCCCccccCceeccce-eeeeecCCC---CCccccceeecCCcEEEEEEecc
Confidence 3567753 333442 2 22234455555557777449999996 444432221 111111 11222 2444555422
Q ss_pred CC----------CCCCCCCceEEEEecCccchhhcCCcccccccccCCCeEecCceEEEcC----CCcEEEEcccCCcee
Q 026609 161 TQ----------KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG----DGQLYVVDRIKELIK 226 (236)
Q Consensus 161 ~~----------~~~~~g~~Gel~v~~~~~~~~~~~~~~~~~~~~~~~~~~~TgD~~~~~~----~g~~~~~GR~~d~i~ 226 (236)
.. ..+..|+.+||+|++.. |.| .|++||+.+... ..++.|.||.+++++
T Consensus 374 ~~~~~~~~~v~l~eve~G~~YelviTt~~---GL~--------------RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~ 436 (581)
T 4epl_A 374 ETGEGEEKPVGLTQVKIGEEYEVVITNYA---GLY--------------RYRLGDVVKVIGFYNNTPQLKFICRRNLILS 436 (581)
T ss_dssp ------CCCEEGGGCCTTCEEEEEEESTT---SCS--------------SEEEEEEEEEEEEETTEEEEEEEEETTCCBC
T ss_pred cccCCCCceeeHHHcCCCCeEEEEEeecc---cee--------------eEEcCCEEEEecccCCCcEEEEEeecCCeEE
Confidence 21 24678999999998753 222 299999998753 257999999999999
Q ss_pred eccEEeecC
Q 026609 227 YKGFQVTSN 235 (236)
Q Consensus 227 ~~G~~i~p~ 235 (236)
+.|+++++.
T Consensus 437 ~~Ge~~~~~ 445 (581)
T 4epl_A 437 INIDKNTER 445 (581)
T ss_dssp SSSCCBCHH
T ss_pred eeeeECCHH
Confidence 999999875
No 40
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=79.00 E-value=12 Score=31.20 Aligned_cols=65 Identities=2% Similarity=-0.103 Sum_probs=53.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 74 (236)
.++.++|++...++-... +...+++++..|+..+..+ ....+++..++++.++..++..+.....
T Consensus 51 ~Gv~~gd~V~i~~~~~~~--~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 116 (509)
T 3ivr_A 51 DGVHTGDRVAILSQNCSE--MIELIGAVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDI 116 (509)
T ss_dssp TTCCTTCEEEEECCSCHH--HHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHH
T ss_pred cCCCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECcchhhh
Confidence 478899999888886654 3357789999999999886 5788999999999999999988766554
No 41
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=77.55 E-value=9.9 Score=32.06 Aligned_cols=66 Identities=6% Similarity=-0.025 Sum_probs=53.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-...+ ...+++++..|+..+..+ ....+++..++++.++..++..+.....+
T Consensus 72 ~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~ 138 (549)
T 3g7s_A 72 KGVRKGEHVGVCIPNSIDY--VMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENF 138 (549)
T ss_dssp TTCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHH
T ss_pred cCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 4788999998888866543 357789999999999886 57889999999999999998877655443
No 42
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=77.42 E-value=8.1 Score=32.55 Aligned_cols=66 Identities=5% Similarity=-0.104 Sum_probs=53.1
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-...+- ..+++++..|+..+..+ ....+++...+++.++..++..+.....+
T Consensus 67 ~Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 133 (541)
T 1v25_A 67 LGVGVGDRVATLGFNHFRHL--EAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLV 133 (541)
T ss_dssp TTCCTTCEEEEECCSSHHHH--HHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred cCCCCCCEEEEEcCCcHHHH--HHHHHHHhcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHH
Confidence 57889999998888665433 57789999999999876 57789999999999999999887655443
No 43
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=75.68 E-value=7.9 Score=32.43 Aligned_cols=64 Identities=11% Similarity=0.076 Sum_probs=50.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
.++.++|++...++-.... ...+++++..|+..+..+ ....+++...+++.++..++..+....
T Consensus 68 ~Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 132 (529)
T 2v7b_A 68 LGVHPEERILLVMLDTVAL--PVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALVQ 132 (529)
T ss_dssp TTCCTTCEEEEECCSSTHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGHH
T ss_pred cCCCCCCEEEEEcCCcHHH--HHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhhh
Confidence 4788899998888866543 356789999999999876 477899999999999998887765443
No 44
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=75.14 E-value=8.6 Score=32.32 Aligned_cols=64 Identities=11% Similarity=0.034 Sum_probs=51.8
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
.++.++|++...+|-... +...+++++..|+..+..+ ....+++...+++.++..++..+....
T Consensus 69 ~Gv~~gd~V~i~~~~~~~--~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~ 133 (536)
T 3ni2_A 69 IGIQQGDVIMLFLPSSPE--FVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYE 133 (536)
T ss_dssp TTCCTTCEEEEECCSSHH--HHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTH
T ss_pred cCCCCCCEEEEEcCCcHH--HHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHH
Confidence 578899999888887654 3357789999999999876 578899999999999999988765443
No 45
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=74.92 E-value=9.4 Score=32.46 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=51.8
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
++.++|++...+|-...+- ..+++++..|+..+..+ ....+++...++..++..++..+.....+
T Consensus 95 Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 95 GLQRGDRVAVVLPRVPEWW--LVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp CCCTTCEEEEECCSCHHHH--HHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred CCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 7889999988888665433 57789999999999876 47789999999999999988776554443
No 46
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=73.89 E-value=10 Score=32.04 Aligned_cols=66 Identities=9% Similarity=0.040 Sum_probs=53.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-... +...+++++..|+..+..+ ....+++...++..++..++..+.....+
T Consensus 70 ~Gv~~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 136 (550)
T 3rix_A 70 YGLNTNHRIVVCSENSLQ--FFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKI 136 (550)
T ss_dssp HTCCTTCEEEEECSSCTT--THHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHH
T ss_pred hCCCCCCEEEEEcCCccc--HHHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHH
Confidence 478899999888886544 3357789999999999876 57899999999999999999887655544
No 47
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=73.09 E-value=12 Score=31.33 Aligned_cols=62 Identities=8% Similarity=0.038 Sum_probs=50.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
.++.++|++...+|-...+ ...+++++..|+..+..+ ....+++..++++.++..++..+..
T Consensus 63 ~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (517)
T 3r44_A 63 LGIAKGDRVALLMPNSVEF--CCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPS 125 (517)
T ss_dssp TTCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGG
T ss_pred cCCCCcCEEEEEcCCCHHH--HHHHHHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCch
Confidence 4788999999888866443 357789999999999886 5788999999999999998876543
No 48
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=71.67 E-value=10 Score=32.03 Aligned_cols=64 Identities=9% Similarity=-0.005 Sum_probs=51.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
.++.++|++...++-.... ...+++++..|+..+..+ ....+++...+++.++..++..+....
T Consensus 72 ~Gv~~gd~V~i~~~n~~e~--~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 136 (548)
T 2d1s_A 72 YGLVVDGRIALCSENCEEF--FIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLD 136 (548)
T ss_dssp HTCCTTCEEEEECSSCTTT--HHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHH
T ss_pred cCCCCCCEEEEEeCCchhH--HHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHH
Confidence 5788999998888865443 347789999999999876 577899999999999999888765443
No 49
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=71.25 E-value=9.1 Score=33.30 Aligned_cols=62 Identities=6% Similarity=-0.016 Sum_probs=51.2
Q ss_pred eccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
..++.++|++...+|...-.- ..+++++..|+..+... .+..+++...+++.++..++..+.
T Consensus 133 ~~Gv~~Gd~V~i~~~~~~e~v--~a~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 133 SMGVRKGDTVAVYMPMVPEAI--ITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp TSCCCTTCEEEECCCSSHHHH--HHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred hcCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccc
Confidence 457889999999999776544 47789999999988875 688999999999999999887543
No 50
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=69.66 E-value=17 Score=30.27 Aligned_cols=61 Identities=8% Similarity=-0.011 Sum_probs=50.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...++-...+- ..+++++..|+..+..+ ....+++..++++.++..++..+.
T Consensus 48 ~Gv~~gd~V~i~~~~~~~~~--~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 109 (503)
T 4fuq_A 48 RGLQVGDRVAAQTEKSVEAL--VLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVVCDPS 109 (503)
T ss_dssp TTCCTTCEEEEECCSCHHHH--HHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGG
T ss_pred cCCCCCCEEEEECCCCHHHH--HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEEECch
Confidence 47889999988888765433 57789999999999886 578899999999999999987764
No 51
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=69.12 E-value=15 Score=30.54 Aligned_cols=66 Identities=11% Similarity=0.038 Sum_probs=50.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEe--ChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV--VPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~--~P~~~~~l 75 (236)
.++.++|++...++-.... ...+++++..|+..+..+ ....+++...+++.+++.++. .+.....+
T Consensus 49 ~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 49 DGLRPQQRVAVVAPNSADV--VIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TTCCTTCEEEEECCSCHHH--HHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred cCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCcEEEecCCccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 4778899998888866543 357789999999999876 577899999999999999887 55444433
No 52
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=68.33 E-value=19 Score=30.49 Aligned_cols=64 Identities=8% Similarity=0.047 Sum_probs=51.7
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 73 (236)
.++.++|++...++-.... ...+++++..|+..+..+ ....+++...+++.++..++..+....
T Consensus 84 ~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~ 148 (563)
T 1amu_A 84 KGIGKDTLVGIMMEKSIDL--FIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVH 148 (563)
T ss_dssp TTCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHH
T ss_pred cCCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhh
Confidence 4788899998888866543 357789999999999876 477899999999999999988775443
No 53
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=67.88 E-value=33 Score=25.08 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=52.2
Q ss_pred EEEEecCh--hhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEe--C----hHH--HHHHHhcCCcCC
Q 026609 15 VFLCVLPL--FHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWV--V----PPL--ILALAKHGLVKK 83 (236)
Q Consensus 15 ~~l~~~p~--~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~--~----P~~--~~~l~~~~~~~~ 83 (236)
+++..++- .|..|....-...-..|-.++.. ...+++.+.+.+++++++.+.. + ++. +..+.+..++..
T Consensus 94 ~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~ 173 (215)
T 3ezx_A 94 LAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEK 173 (215)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTT
T ss_pred eEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcC
Confidence 44444443 37778744433334667776655 4678999999999999997666 2 221 233333322222
Q ss_pred CCCCCceEEeecCCCCCHHHHH
Q 026609 84 FDLSSLKLVGSGAAPLGKELME 105 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~ 105 (236)
.. ..++ ++.||.+++++..+
T Consensus 174 ~~-~~v~-v~vGG~~~~~~~a~ 193 (215)
T 3ezx_A 174 LR-DSVK-CMFGGAPVSDKWIE 193 (215)
T ss_dssp CG-GGSE-EEEESSSCCHHHHH
T ss_pred CC-CCCE-EEEECCCCCHHHHH
Confidence 10 1333 67899999976544
No 54
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=67.57 E-value=12 Score=31.80 Aligned_cols=60 Identities=13% Similarity=0.022 Sum_probs=49.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-.... ...+++++..|+..+..+ .+..+++...+++.++..++..+
T Consensus 106 ~Gv~~Gd~V~l~~~~~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 106 HGIGKGDYVMLTLKSRYDF--WYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp TTCCTTCEEEEECTTCTHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEES
T ss_pred cCCCCCCEEEEEcCCCHHH--HHHHHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEec
Confidence 5788999999998866553 357789999999999876 57889999999999999888654
No 55
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=66.77 E-value=13 Score=32.16 Aligned_cols=60 Identities=12% Similarity=0.039 Sum_probs=49.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-..-.- ..+++++..|+..+... .+.++++...+++.++..++...
T Consensus 127 ~Gv~~Gd~V~i~~~~~~e~v--va~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 127 LGIKKGDVVAIYMPMVPEAA--VAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp HTCCTTCEEEEECCSSHHHH--HHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEES
T ss_pred cCCCCCCEEEEEeCCCHHHH--HHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 57889999999998776543 47789999999998875 57899999999999998887643
No 56
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=64.44 E-value=19 Score=30.48 Aligned_cols=61 Identities=13% Similarity=0.071 Sum_probs=50.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.++.++|++...++-...+- ..+++++..|+..+..+ ....+++...+++.++..++....
T Consensus 120 ~Gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~ 181 (570)
T 4gr5_A 120 LGVAPGTLVGVHLERGFDMV--VALLAVLKAGGGYTMLDPQFPVERLALSLEDTGAPLLVTSRP 181 (570)
T ss_dssp TTCCTTCEEEEECCSSHHHH--HHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTT
T ss_pred cCCCCCCEEEEEeCCCHHHH--HHHHHHHHHCCEEEEcCCCChHHHHHHHHHhcCCCEEEecch
Confidence 57889999998888765543 47789999999999886 467899999999999998887654
No 57
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=61.71 E-value=18 Score=30.37 Aligned_cols=60 Identities=12% Similarity=0.020 Sum_probs=48.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-...+ ...+++++..|+..+..+ ....+++...+++.++..++..+
T Consensus 75 ~Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 135 (544)
T 3o83_A 75 KGLGKGDTALVQLPNVAEF--YIVFFALLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSR 135 (544)
T ss_dssp TTCCTTCEEEECCCSSHHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEEET
T ss_pred CCCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEecCCCCCCHHHHHHHHHhcCeeEEEEcc
Confidence 4788999998888765443 357789999999998765 57788999999999999988655
No 58
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=59.60 E-value=18 Score=30.17 Aligned_cols=60 Identities=15% Similarity=-0.004 Sum_probs=47.4
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-... +...+++++..|+..+..+ ....+++...++..++..++...
T Consensus 49 ~g~~~gd~V~i~~~n~~~--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii~~~ 109 (521)
T 3l8c_A 49 LALLAKSPVLVFGAQTYD--MLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLIIAIE 109 (521)
T ss_dssp TCCCTTCCEEEEECSSHH--HHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEEESS
T ss_pred cCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCEEEecC
Confidence 567888888877776543 3357789999999988875 57889999999999999887654
No 59
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=59.47 E-value=28 Score=29.23 Aligned_cols=60 Identities=8% Similarity=-0.003 Sum_probs=48.5
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...+|-.... ...+++++..|+..+..+ ....+++...++..++..++..+
T Consensus 70 ~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 130 (539)
T 1mdb_A 70 LGIQQKDRVVVQLPNIKEF--FEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPD 130 (539)
T ss_dssp HTCCTTCEEEECCCSSHHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEES
T ss_pred cCCCCCCEEEEEcCCcHHH--HHHHHHHHHcCeEEecCCCCCCHHHHHHHHHhCCCCEEEecc
Confidence 4788999998888866543 357789999999988765 57789999999999999988654
No 60
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=58.02 E-value=25 Score=29.08 Aligned_cols=56 Identities=5% Similarity=-0.054 Sum_probs=45.5
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
++|++...+|-... +...+++++..|+..+..+ ....+++...+++.++..++..+
T Consensus 47 ~gd~V~i~~~n~~e--~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 103 (501)
T 3ipl_A 47 QQSRVGLYIDNSIQ--SIILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTL 103 (501)
T ss_dssp CCSEEEEECCSSHH--HHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHTTCCEEEESS
T ss_pred CCCEEEEEcCCCHH--HHHHHHHHHHcCCEEEecCccCCHHHHHHHHHhcCCCEEEEcc
Confidence 78888888886544 3357789999999999986 57899999999999999887653
No 61
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=57.27 E-value=35 Score=28.63 Aligned_cols=66 Identities=6% Similarity=-0.091 Sum_probs=50.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCC-------HHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFD-------LEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~-------~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-...+ ...+++++..|+..+..+ ... .+++...++..++..++........+
T Consensus 69 ~Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 142 (576)
T 3gqw_A 69 LNLKKGDRVALIAETSSEF--VEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLV 142 (576)
T ss_dssp TCCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHH
T ss_pred cCCCCCCEEEEEcCCcHHH--HHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHH
Confidence 4788999999988876543 357789999999999875 343 67888899999999988877654443
No 62
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=53.66 E-value=49 Score=27.92 Aligned_cols=66 Identities=12% Similarity=0.047 Sum_probs=51.3
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcCceEEEeChHHHHHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHRVTHIWVVPPLILAL 75 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~~t~~~~~P~~~~~l 75 (236)
.++.++|++...++-... +...+++++..|+..+..++ . ..+++...++..++..++..+.....+
T Consensus 60 ~gv~~gd~V~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (590)
T 3kxw_A 60 EGAKPGDRVLLLFAPGLP--LIQAFLGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKF 129 (590)
T ss_dssp TTCCTTCEEEEECCSSHH--HHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHH
T ss_pred cCCCCCCEEEEEcCCchh--HHHHHHHHHHhCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 478899999888886654 33577899999999998764 3 346778889999999998888766654
No 63
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=51.39 E-value=35 Score=31.13 Aligned_cols=62 Identities=10% Similarity=0.035 Sum_probs=51.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChHH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 71 (236)
.++.++|++...+|-... +...+++++..|+..+..+ .+.++++...+++.++..++..+..
T Consensus 108 ~Gv~~gd~V~i~~~ns~e--~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 170 (979)
T 3tsy_A 108 LGVNQNDVVMLLLPNCPE--FVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARY 170 (979)
T ss_dssp TTCCTTCEEEEECSSCHH--HHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTT
T ss_pred cCCCCcCEEEEEeCCCHH--HHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHH
Confidence 578899999988887644 3357789999999999876 5789999999999999999877654
No 64
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=50.92 E-value=21 Score=29.63 Aligned_cols=59 Identities=17% Similarity=0.117 Sum_probs=44.9
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 68 (236)
.+..++|++...++-... +...+++++..|+..+..+ ....+++...+++.+++.++..
T Consensus 47 ~~~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~ 106 (511)
T 3e7w_A 47 ISGEKKSPILVYGHMEPH--MIVSFLGSVKAGHPYIPVDLSIPSERIAKIIESSGAELLIHA 106 (511)
T ss_dssp SCSSSCCCEEEEESSCHH--HHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTCCEEEES
T ss_pred cCCCCCCeEEEEecCCHH--HHHHHHHHHHhCCEEEecCCCChHHHHHHHHHhCCCCEEEec
Confidence 455677877777665433 2356789999999988875 5789999999999999988863
No 65
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=49.86 E-value=37 Score=28.12 Aligned_cols=59 Identities=8% Similarity=0.028 Sum_probs=46.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 68 (236)
.++.++|++...++-... +...+++++..|+..+..+ ....+++...++..++..++..
T Consensus 46 ~g~~~gd~V~i~~~n~~e--~~~~~la~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~~i~~ 105 (512)
T 3fce_A 46 EYPDDRSPIMVYGHMQPE--MIINFLGCVKAGHAYIPVDLSIPADRVQRIAENSGAKLLLSA 105 (512)
T ss_dssp HSTTCCCCEEEEESSCHH--HHHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCCEEEES
T ss_pred hCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEeeCCCCcHHHHHHHHHhcCCCEEEec
Confidence 467788888777775543 3357789999999988875 5788999999999999888754
No 66
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=48.54 E-value=51 Score=28.15 Aligned_cols=60 Identities=10% Similarity=-0.064 Sum_probs=47.6
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
.++.++|++...++-... +...+++++..|+..+..+ ....+++..++++.++..+....
T Consensus 70 ~Gv~~gd~V~l~~~~s~~--~vva~lA~l~aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~ 130 (617)
T 3rg2_A 70 QGIKPGETALVQLGNVAE--LYITFFALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADR 130 (617)
T ss_dssp TTCCTTCEEEEECCSSHH--HHHHHHHHHHHTCEEEEECTTCCHHHHHHHHHHHCCSEEEEET
T ss_pred cCCCCCCEEEEECCCcHH--HHHHHHHHHhcCeEEccCCccccHHHHHHHHhhcCceEEEecc
Confidence 478889999888886544 3357789999999988765 56788999999999999887654
No 67
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=47.29 E-value=36 Score=27.82 Aligned_cols=64 Identities=13% Similarity=0.058 Sum_probs=49.5
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcCceEEEeChHHHHHHHh
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAK 77 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 77 (236)
++|++...++-...+ ...+++++..|+..+..+. ...+++..++++.++..++..+.....+..
T Consensus 81 ~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 81 TGDRVVISAPQGLEY--VVAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp TTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCEEEEEcCCcHHH--HHHHHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 788888887766543 3577899999999998753 456788899999999999988876665543
No 68
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=46.67 E-value=67 Score=27.55 Aligned_cols=59 Identities=7% Similarity=-0.139 Sum_probs=47.2
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeC
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~ 68 (236)
.+..++|++...++-... +...+++++..|+..+..+ ....+++..++++.++..+...
T Consensus 72 ~Gv~~g~~V~i~~~~s~~--~vva~lailkaGa~~vpld~~~p~~~l~~il~~~~~~~vl~~ 131 (620)
T 4dg8_A 72 HYPQPGVCLGVYGEYSRE--SITCLLAILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDC 131 (620)
T ss_dssp HCCSSCCEEEEESSSCHH--HHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTEEEEEEC
T ss_pred cCCCCCCEEEEEeCCCHH--HHHHHHHHHHhCCEEEeeCccChHHHHHHHHHhCCCcEEEec
Confidence 467889998888886544 3357789999999999886 4678889999999999988744
No 69
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=44.36 E-value=73 Score=26.69 Aligned_cols=58 Identities=10% Similarity=0.047 Sum_probs=45.8
Q ss_pred cCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeCh
Q 026609 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (236)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P 69 (236)
+. ++|++...++-...+- ..+++++..|+..+..+ ....+++..++++.++..++...
T Consensus 76 g~-~gd~V~i~~~n~~~~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~ 134 (562)
T 3ite_A 76 SL-HGRAIAVSLDRSLIAF--AIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCD 134 (562)
T ss_dssp TC-SSCEEEEECCSCHHHH--HHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECT
T ss_pred CC-CCCEEEEEeCCCHHHH--HHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEcc
Confidence 45 6888888888665433 47789999999999876 57889999999999988877653
No 70
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=42.02 E-value=1e+02 Score=25.95 Aligned_cols=76 Identities=11% Similarity=-0.025 Sum_probs=48.0
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcC--ceEEEe---ChHHHHHHHhcCCcCC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK----FDLEMFLRAIEKHR--VTHIWV---VPPLILALAKHGLVKK 83 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~--~t~~~~---~P~~~~~l~~~~~~~~ 83 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. .....+.+++++.. ...+.. -+.....|+++
T Consensus 152 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~----- 226 (517)
T 3r31_A 152 GVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNH----- 226 (517)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTC-----
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhC-----
Confidence 5788888877654442 346788999999999763 34566777777763 223333 33456666654
Q ss_pred CCCCCceEEeecCC
Q 026609 84 FDLSSLKLVGSGAA 97 (236)
Q Consensus 84 ~~l~~lr~i~~~G~ 97 (236)
+.++.+...|.
T Consensus 227 ---p~vd~I~FTGS 237 (517)
T 3r31_A 227 ---PDVAKVSLTGS 237 (517)
T ss_dssp ---TTEEEEEEESC
T ss_pred ---CCcCEEeccCC
Confidence 33566666664
No 71
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=37.37 E-value=95 Score=26.14 Aligned_cols=77 Identities=9% Similarity=-0.058 Sum_probs=46.7
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcC-----ceEEEeChHHHHHHHhcCCcC
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHR-----VTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~-----~t~~~~~P~~~~~l~~~~~~~ 82 (236)
--+++...|+.+-..+. ..+..+|..|.++++-|. . ....+.+++.+.. +..+.+.......|++++
T Consensus 163 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p--- 239 (521)
T 4e4g_A 163 VGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHP--- 239 (521)
T ss_dssp CCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCT---
T ss_pred CcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCC---
Confidence 35778888876554432 356788999999999763 2 3456677777752 233333344556666543
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 240 -----~vd~I~FTGS 249 (521)
T 4e4g_A 240 -----DIAAVSFVGS 249 (521)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEEECC
Confidence 3555555554
No 72
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=35.74 E-value=1.2e+02 Score=25.24 Aligned_cols=77 Identities=13% Similarity=0.028 Sum_probs=47.9
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC--ceEEE---eChHHHHHHHhcCCcC
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR--VTHIW---VVPPLILALAKHGLVK 82 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~--~t~~~---~~P~~~~~l~~~~~~~ 82 (236)
=-+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++.. ...+. +.......|++++
T Consensus 142 ~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~--- 218 (486)
T 1t90_A 142 IGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHP--- 218 (486)
T ss_dssp CSEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCT---
T ss_pred cCEEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCC---
Confidence 3578888887754332 24677899999999997632 3456777777752 22333 3334556666543
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 219 -----~v~~I~fTGS 228 (486)
T 1t90_A 219 -----EIKAISFVGS 228 (486)
T ss_dssp -----TEEEEEEESC
T ss_pred -----CCCEEEEeCC
Confidence 3666666664
No 73
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=35.07 E-value=1e+02 Score=25.85 Aligned_cols=76 Identities=16% Similarity=0.140 Sum_probs=47.1
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcC--ceEEEeCh----HHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHR--VTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~--~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
-++....|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++.. ...+..++ .....|.+++
T Consensus 180 GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~--- 256 (517)
T 2o2p_A 180 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHP--- 256 (517)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCT---
T ss_pred ccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCC---
Confidence 4788889976544442 357788999999999763 2 3456777777752 23333332 3456666553
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 257 -----~v~~V~FTGS 266 (517)
T 2o2p_A 257 -----DVRKIGFTGS 266 (517)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CCCEEEEECC
Confidence 3556665554
No 74
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=34.33 E-value=88 Score=26.45 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=45.1
Q ss_pred cEEEEecChhhHHh-HHHHHHHHhhcCcEEEEcCC-CC---HHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAK-FD---LEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-.. ....+..+|..|.++++-|. .. ...+.+++.+. ....+..++ ..-..|++++
T Consensus 174 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p--- 250 (538)
T 3qan_A 174 GVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHP--- 250 (538)
T ss_dssp CEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCT---
T ss_pred cEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCC---
Confidence 57888888876322 32467889999999999764 33 34566667664 222333332 3455555542
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 251 -----~v~~I~FTGS 260 (538)
T 3qan_A 251 -----KTSLITFTGS 260 (538)
T ss_dssp -----TEEEEEEESC
T ss_pred -----CcCEEEEECC
Confidence 3555555553
No 75
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=34.32 E-value=82 Score=26.05 Aligned_cols=57 Identities=9% Similarity=-0.034 Sum_probs=42.1
Q ss_pred CCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.+|++...++-... +...+++++..|+..+..+ ....+++..++++.++..++..+.
T Consensus 67 ~~~~V~i~~~~~~~--~~~~~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 124 (505)
T 3nyq_A 67 GAGRVAVWATPAME--TGVAVVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPD 124 (505)
T ss_dssp ---CEEEECCSSHH--HHHHHHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSEEEECTT
T ss_pred CCCEEEEEcCCCHH--HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECCc
Confidence 46667666665443 3357789999999999876 578899999999999999887653
No 76
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=34.06 E-value=89 Score=28.93 Aligned_cols=78 Identities=10% Similarity=0.041 Sum_probs=48.5
Q ss_pred CCcEEEEecChhhH-HhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCC
Q 026609 12 LDYVFLCVLPLFHV-FGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGL 80 (236)
Q Consensus 12 ~~d~~l~~~p~~~~-~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~ 80 (236)
+--+++...|+.+- .-....+..+|..|.++++-|.. ....+.+++.+. ....+..+| .....|+.++
T Consensus 666 PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp- 744 (1026)
T 4f9i_A 666 PKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHP- 744 (1026)
T ss_dssp ECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCT-
T ss_pred cCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCC-
Confidence 34688999998773 23335677899999999997642 244567777765 333444444 3456666553
Q ss_pred cCCCCCCCceEEeecCC
Q 026609 81 VKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~ 97 (236)
.++.+...|+
T Consensus 745 -------~v~~V~FTGS 754 (1026)
T 4f9i_A 745 -------DISLIAFTGS 754 (1026)
T ss_dssp -------TEEEEEEESC
T ss_pred -------CCCEEEeCCC
Confidence 3555555553
No 77
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=33.06 E-value=97 Score=26.00 Aligned_cols=76 Identities=9% Similarity=0.101 Sum_probs=46.1
Q ss_pred cEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-..+ ...+..+|..|.++++-|.. ....+.+++++. ....+..++ .....|++++
T Consensus 175 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~--- 251 (516)
T 1uzb_A 175 GAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHP--- 251 (516)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCT---
T ss_pred ceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCC---
Confidence 588888898754222 24678999999999997642 244566777664 223333332 3556666542
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|+
T Consensus 252 -----~v~~I~FTGS 261 (516)
T 1uzb_A 252 -----RIRFINFTGS 261 (516)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEecCC
Confidence 3556665553
No 78
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=32.35 E-value=1e+02 Score=25.74 Aligned_cols=76 Identities=11% Similarity=0.037 Sum_probs=47.8
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhc--CceEEEeCh---HHHHHHHhcCCcCC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK----FDLEMFLRAIEKH--RVTHIWVVP---PLILALAKHGLVKK 83 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~--~~t~~~~~P---~~~~~l~~~~~~~~ 83 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. .....+.+++++. ....+..++ ..-..|.++
T Consensus 159 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~----- 233 (501)
T 1uxt_A 159 GVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVAD----- 233 (501)
T ss_dssp SEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTC-----
T ss_pred cEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhC-----
Confidence 5888888887654332 457789999999999763 2355677777775 233344333 345556544
Q ss_pred CCCCCceEEeecCC
Q 026609 84 FDLSSLKLVGSGAA 97 (236)
Q Consensus 84 ~~l~~lr~i~~~G~ 97 (236)
+.++.+...|.
T Consensus 234 ---~~vd~I~FTGS 244 (501)
T 1uxt_A 234 ---DRVAAVSFTGS 244 (501)
T ss_dssp ---TTCCEEEEESC
T ss_pred ---CCcCEEEEeCc
Confidence 24566666664
No 79
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=31.94 E-value=1.2e+02 Score=25.22 Aligned_cols=76 Identities=11% Similarity=-0.024 Sum_probs=46.8
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeC----hHHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV----PPLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~----P~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+. ....+..+ +..-..|..++
T Consensus 144 GVv~~I~pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p--- 220 (490)
T 2ve5_A 144 GVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP--- 220 (490)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCT---
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCC---
Confidence 5778888877665553 4567899999999997632 345566777665 22233333 24556666543
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 221 -----~vd~v~fTGS 230 (490)
T 2ve5_A 221 -----LIEKISFTGG 230 (490)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEEeCC
Confidence 3555555553
No 80
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=31.89 E-value=91 Score=26.04 Aligned_cols=77 Identities=13% Similarity=0.125 Sum_probs=47.2
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc-CceEEEeCh----HHHHHHHhcCCcC
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH-RVTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~-~~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
=-+++...|+.+-..+ ...+..+|..|.++++-|. . ....+.+++++. ....+..++ ..-..|+++
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~---- 235 (495)
T 1wnd_A 160 LGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGH---- 235 (495)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTC----
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhC----
Confidence 3588888998755333 2467889999999999763 2 345667777663 333333333 234555543
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
+.++.+...|.
T Consensus 236 ----p~vd~I~FTGS 246 (495)
T 1wnd_A 236 ----PKVRMVSLTGS 246 (495)
T ss_dssp ----TTEEEEEEESC
T ss_pred ----CCcCEEEEECc
Confidence 34677766664
No 81
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=31.81 E-value=1.2e+02 Score=25.26 Aligned_cols=76 Identities=16% Similarity=0.086 Sum_probs=47.4
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhc--CceEEEeCh---HHHHHHHhcCCcCC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK----FDLEMFLRAIEKH--RVTHIWVVP---PLILALAKHGLVKK 83 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~--~~t~~~~~P---~~~~~l~~~~~~~~ 83 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. .....+.+++++. ....+..++ ..-..|..++
T Consensus 157 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p---- 232 (503)
T 1a4s_A 157 GVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHP---- 232 (503)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCT----
T ss_pred ceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCC----
Confidence 5888888877654443 357889999999999763 2345677777775 223343333 3455666553
Q ss_pred CCCCCceEEeecCC
Q 026609 84 FDLSSLKLVGSGAA 97 (236)
Q Consensus 84 ~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 233 ----~v~~V~FTGS 242 (503)
T 1a4s_A 233 ----NVAKVSFTGS 242 (503)
T ss_dssp ----TCCEEEEESC
T ss_pred ----CcCEEEEeCC
Confidence 3556655554
No 82
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=31.45 E-value=1.4e+02 Score=24.74 Aligned_cols=76 Identities=17% Similarity=0.140 Sum_probs=47.2
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK----FDLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. .....+.+++++. ....+..++ ..-..|.++
T Consensus 144 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~---- 219 (479)
T 2imp_A 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGN---- 219 (479)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHC----
T ss_pred ceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhC----
Confidence 5778888877655543 357789999999999763 2345667777764 223333332 245566654
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
+.++.+...|.
T Consensus 220 ----~~v~~V~fTGS 230 (479)
T 2imp_A 220 ----PKVAMVSMTGS 230 (479)
T ss_dssp ----TTEEEEEEESC
T ss_pred ----CCcCEEEEeCC
Confidence 24667766664
No 83
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=31.45 E-value=1.2e+02 Score=25.30 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=41.8
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHG 79 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~ 79 (236)
-++....|+.+-..+. ..+..+|..|.++++-|. . ....+.+++.+. ....+..++ ..-..|.+++
T Consensus 170 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p 246 (504)
T 3ek1_A 170 GVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSND 246 (504)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCT
T ss_pred eEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCC
Confidence 5778888877654432 347789999999999763 2 345667777765 333344443 3566676653
No 84
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=31.26 E-value=1.2e+02 Score=25.30 Aligned_cols=77 Identities=16% Similarity=0.095 Sum_probs=47.2
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCc
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLV 81 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~ 81 (236)
--++....|+.+-..+ ...+..+|..|.++++-|. . ....+.+++++. ....+..++ ..-..|++++
T Consensus 159 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p-- 236 (500)
T 1o04_A 159 VGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHE-- 236 (500)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCT--
T ss_pred CCcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCC--
Confidence 3588889998754333 2467889999999999763 2 345567777665 223333332 3556666542
Q ss_pred CCCCCCCceEEeecCC
Q 026609 82 KKFDLSSLKLVGSGAA 97 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 237 ------~v~~I~FTGS 246 (500)
T 1o04_A 237 ------DVDKVAFTGS 246 (500)
T ss_dssp ------TCCEEEEESC
T ss_pred ------CcCEEEEECC
Confidence 3566666554
No 85
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=30.42 E-value=1.3e+02 Score=25.11 Aligned_cols=77 Identities=13% Similarity=0.034 Sum_probs=47.2
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCc
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLV 81 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~ 81 (236)
--+++...|+.+-..+ ...+..+|..|.++++-|. . ....+.+++++. ....+..++ ..-..|++++
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~-- 237 (501)
T 1bxs_A 160 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHM-- 237 (501)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCT--
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCC--
Confidence 3588889998754333 2467899999999999763 2 345667777665 333333332 3455666542
Q ss_pred CCCCCCCceEEeecCC
Q 026609 82 KKFDLSSLKLVGSGAA 97 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 238 ------~v~~I~FTGS 247 (501)
T 1bxs_A 238 ------DVDKVAFTGS 247 (501)
T ss_dssp ------TCSEEEEESC
T ss_pred ------CcCEEEEECC
Confidence 3556666554
No 86
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=30.26 E-value=1.3e+02 Score=25.63 Aligned_cols=88 Identities=11% Similarity=0.015 Sum_probs=49.8
Q ss_pred cEEEEecChhhHHhHHHHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCcCC
Q 026609 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLVKK 83 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~~~ 83 (236)
-++....|+.+-.........+.+.|.++++-|.. ....+.+++++. ....+..+| ..-..|+.+
T Consensus 202 GVV~~I~PwNfP~~~~~~~~apALaGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~h----- 276 (563)
T 4e3x_A 202 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSS----- 276 (563)
T ss_dssp SEEEEECCSSCHHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTC-----
T ss_pred eEEEEECCchHHHHHHHHHHHHhhcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhC-----
Confidence 68889999887654433333333369999987642 344567777775 333444444 234555543
Q ss_pred CCCCCceEEeecCCC-CCHHHHHHHHH
Q 026609 84 FDLSSLKLVGSGAAP-LGKELMEECAK 109 (236)
Q Consensus 84 ~~l~~lr~i~~~G~~-~~~~~~~~~~~ 109 (236)
+.++.+...|.. .-..+.+...+
T Consensus 277 ---p~v~~I~FTGSt~vG~~i~~~aa~ 300 (563)
T 4e3x_A 277 ---EHLCGINFTGSVPTFKHLWRQVAQ 300 (563)
T ss_dssp ---TTEEEEEEESCHHHHHHHHHHHHH
T ss_pred ---CCcCEEEEECCHHHHHHHHHHHHh
Confidence 346666666643 22334444433
No 87
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=29.96 E-value=1.5e+02 Score=24.74 Aligned_cols=78 Identities=12% Similarity=0.112 Sum_probs=47.7
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcC--ceEEEeCh----HHHHHHHhcCC
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHR--VTHIWVVP----PLILALAKHGL 80 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~--~t~~~~~P----~~~~~l~~~~~ 80 (236)
+--++....|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++.. ...+..++ ..-..|++++
T Consensus 161 P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp- 239 (497)
T 3i44_A 161 AIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHP- 239 (497)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCT-
T ss_pred CceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCC-
Confidence 335788888877654432 456788999999999763 2 3456677777653 22333332 4566666653
Q ss_pred cCCCCCCCceEEeecCC
Q 026609 81 VKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 240 -------~v~~I~FTGS 249 (497)
T 3i44_A 240 -------DLEMISFTGS 249 (497)
T ss_dssp -------TCCEEEEESC
T ss_pred -------CcCEEEEeCc
Confidence 3555665554
No 88
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=29.69 E-value=1.4e+02 Score=24.60 Aligned_cols=77 Identities=12% Similarity=0.017 Sum_probs=46.8
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-CC---HHHHHHHHHhc--CceEEE---eChHHHHHHHhcCCcC
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-FD---LEMFLRAIEKH--RVTHIW---VVPPLILALAKHGLVK 82 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~~--~~t~~~---~~P~~~~~l~~~~~~~ 82 (236)
--++....|+.+-..+. ..+..+|..|.++++-|. .. ...+.+++.+. ....+. +.+.....|++++
T Consensus 127 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~--- 203 (462)
T 3etf_A 127 LGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDP--- 203 (462)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTST---
T ss_pred CcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCC---
Confidence 35788888877654443 346789999999999764 33 34566677664 322333 3345556666542
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 204 -----~v~~v~fTGS 213 (462)
T 3etf_A 204 -----RIAAVTVTGS 213 (462)
T ss_dssp -----TEEEEEEESC
T ss_pred -----CCCEEEEeCC
Confidence 4566666664
No 89
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=29.68 E-value=1.4e+02 Score=24.75 Aligned_cols=66 Identities=20% Similarity=0.130 Sum_probs=40.1
Q ss_pred CcEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCC-CC---HHHHHHHHHhc--Cc---eEEEeChHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAK-FD---LEMFLRAIEKH--RV---THIWVVPPLILALAKH 78 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~~--~~---t~~~~~P~~~~~l~~~ 78 (236)
=-+++...|+.+-..+ ...+..+|..|.++++-|. .. ...+.+++.+. .. ..+.+.+.....|+.+
T Consensus 140 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~ 215 (490)
T 3ju8_A 140 HGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAH 215 (490)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTC
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhC
Confidence 3577788886655433 2346788999999999764 22 34566666664 22 2333334556666654
No 90
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=29.67 E-value=1.3e+02 Score=28.41 Aligned_cols=61 Identities=10% Similarity=0.032 Sum_probs=49.0
Q ss_pred ccCCCCcEEEEecChhhHHhHHHHHHHHhhcCcEEEEcC-CCCHHHHHHHHHhcCceEEEeChH
Q 026609 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (236)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 70 (236)
.+..+++++..+++-... +...+++++..|+..+..+ ....+++..++++.++..+...+.
T Consensus 509 ~Gv~~g~~V~i~~~~s~~--~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~ 570 (1304)
T 2vsq_A 509 HGAGKGSVVALYTKRSLE--LVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQE 570 (1304)
T ss_dssp TTCCTTCEEEECCCSSHH--HHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECST
T ss_pred cCcCCcCEEEEEeCCCHH--HHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcc
Confidence 467889999888886544 3357789999999999886 467889999999999998887654
No 91
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=29.27 E-value=1.4e+02 Score=25.09 Aligned_cols=76 Identities=17% Similarity=0.105 Sum_probs=46.1
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
-++....|+++-..+. ..+..+|..|.++++-|. . ....+.+++.+. ....+..++ .....|+.++
T Consensus 163 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p--- 239 (528)
T 3u4j_A 163 GVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDP--- 239 (528)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCT---
T ss_pred eEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCC---
Confidence 5778888877654443 346788999999999763 2 345566777665 223333332 4566676653
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 240 -----~vd~I~FTGS 249 (528)
T 3u4j_A 240 -----NVDMVAFTGS 249 (528)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEEeCC
Confidence 3455555553
No 92
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=29.27 E-value=1.7e+02 Score=24.42 Aligned_cols=76 Identities=16% Similarity=0.075 Sum_probs=47.1
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEeCh---HHHHHHHhcCCcCC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVVP---PLILALAKHGLVKK 83 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~~~~~P---~~~~~l~~~~~~~~ 83 (236)
-+++...|+++-..+. ..+..+|..|.++++-|. . ....+.+++++. ....+..++ ..-..|+++
T Consensus 148 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~----- 222 (495)
T 3b4w_A 148 GVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSN----- 222 (495)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTC-----
T ss_pred ceEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhC-----
Confidence 5888889976544432 356788999999999763 2 345677777775 223333333 344555443
Q ss_pred CCCCCceEEeecCC
Q 026609 84 FDLSSLKLVGSGAA 97 (236)
Q Consensus 84 ~~l~~lr~i~~~G~ 97 (236)
+.++.+...|.
T Consensus 223 ---~~v~~I~FTGS 233 (495)
T 3b4w_A 223 ---PDIDMFTFTGS 233 (495)
T ss_dssp ---TTCCEEEEESC
T ss_pred ---CCcCEEEEeCC
Confidence 34667766664
No 93
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=29.25 E-value=1.7e+02 Score=24.32 Aligned_cols=77 Identities=13% Similarity=0.045 Sum_probs=47.2
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhcC--ceEEEeCh----HHHHHHHhcCCc
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKHR--VTHIWVVP----PLILALAKHGLV 81 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~--~t~~~~~P----~~~~~l~~~~~~ 81 (236)
--++....|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+.. ...+..++ .....|++++
T Consensus 149 ~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p-- 226 (497)
T 3k2w_A 149 RGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESP-- 226 (497)
T ss_dssp CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCS--
T ss_pred CceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCC--
Confidence 35788888876654443 4577899999999997632 3456677777653 22333332 3556666543
Q ss_pred CCCCCCCceEEeecCC
Q 026609 82 KKFDLSSLKLVGSGAA 97 (236)
Q Consensus 82 ~~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 227 ------~vd~I~fTGS 236 (497)
T 3k2w_A 227 ------ITKMITMTGS 236 (497)
T ss_dssp ------SEEEEEEESC
T ss_pred ------CcCEEEEECc
Confidence 3556666554
No 94
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=29.10 E-value=1.2e+02 Score=24.98 Aligned_cols=85 Identities=13% Similarity=0.112 Sum_probs=49.3
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-CC---HHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-FD---LEMFLRAIEKH--RVTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. .. ...+.+++.+. ....+..++ ..-..|+.++
T Consensus 145 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~--- 221 (475)
T 1euh_A 145 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQ--- 221 (475)
T ss_dssp SEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCT---
T ss_pred ceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCC---
Confidence 5788888877654443 357789999999999764 22 34566667664 222333332 2455566543
Q ss_pred CCCCCCceEEeecCCCCCHHHHHHHHH
Q 026609 83 KFDLSSLKLVGSGAAPLGKELMEECAK 109 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~ 109 (236)
.++.+...|. .+..+.+.+
T Consensus 222 -----~v~~V~fTGS---~~~g~~i~~ 240 (475)
T 1euh_A 222 -----AVNFINFTGS---TGIGERIGK 240 (475)
T ss_dssp -----TCCEEEEESC---HHHHHHHHH
T ss_pred -----CcCEEEEECc---hHHHHHHHH
Confidence 3555655553 344444444
No 95
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=28.63 E-value=2.3e+02 Score=23.18 Aligned_cols=66 Identities=17% Similarity=0.044 Sum_probs=39.4
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCCC----HHHHHHHHH----h--cCceEEEeC----hHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKFD----LEMFLRAIE----K--HRVTHIWVV----PPLILALAKH 78 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~~----~~~~~~~i~----~--~~~t~~~~~----P~~~~~l~~~ 78 (236)
-++....|+.+-.... ..+..+|..|.++++-|... ...+.+++. + .....+..+ +..-..|+++
T Consensus 105 GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~ 184 (452)
T 3my7_A 105 GIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKH 184 (452)
T ss_dssp CEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHC
T ss_pred eEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhC
Confidence 5777888876544432 45678899999999976432 333444443 3 333334433 2466777776
Q ss_pred C
Q 026609 79 G 79 (236)
Q Consensus 79 ~ 79 (236)
+
T Consensus 185 p 185 (452)
T 3my7_A 185 D 185 (452)
T ss_dssp T
T ss_pred C
Confidence 4
No 96
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=28.19 E-value=1.5e+02 Score=24.74 Aligned_cols=77 Identities=12% Similarity=0.044 Sum_probs=45.8
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc-CceEEEeCh----HHHHHHHhcCCcC
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH-RVTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~-~~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
--++....|+.+-..+. ..+..+|..|.++++-|. . ....+.+++.+. ....+..++ .....|+.++
T Consensus 162 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p--- 238 (498)
T 4f3x_A 162 IGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHP--- 238 (498)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCT---
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCC---
Confidence 35788888877654443 346788999999999763 2 244566666554 222333332 3556666543
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|+
T Consensus 239 -----~v~~V~FTGS 248 (498)
T 4f3x_A 239 -----KVGMVSITGD 248 (498)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEEECC
Confidence 3555555553
No 97
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=28.13 E-value=1.5e+02 Score=24.64 Aligned_cols=79 Identities=9% Similarity=-0.027 Sum_probs=49.0
Q ss_pred CCcEEEEecChhhHHhHHH-HHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcC-----ceEEEeC-hHHHHHHHhcCC
Q 026609 12 LDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHR-----VTHIWVV-PPLILALAKHGL 80 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~-----~t~~~~~-P~~~~~l~~~~~ 80 (236)
+--++....|+.+-..+.. .+..+|..|.++++-|. . ....+.+++++.. ++.+.+. +..-..|.+++
T Consensus 142 P~GVv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p- 220 (490)
T 2wme_A 142 PLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHP- 220 (490)
T ss_dssp ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCT-
T ss_pred ceeEEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCC-
Confidence 3357888888876555533 46778899999999763 2 3455677777652 2333332 23556666653
Q ss_pred cCCCCCCCceEEeecCCC
Q 026609 81 VKKFDLSSLKLVGSGAAP 98 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~ 98 (236)
.++.+...|+.
T Consensus 221 -------~v~~I~FTGS~ 231 (490)
T 2wme_A 221 -------LIEKISFTGGT 231 (490)
T ss_dssp -------TCCEEEEESCH
T ss_pred -------CCCEEEEECCh
Confidence 35667666643
No 98
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=27.45 E-value=1.3e+02 Score=25.09 Aligned_cols=76 Identities=11% Similarity=0.076 Sum_probs=46.6
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhc--CceEEEeCh---H----HHHHHHhcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK----FDLEMFLRAIEKH--RVTHIWVVP---P----LILALAKHG 79 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~--~~t~~~~~P---~----~~~~l~~~~ 79 (236)
-+++...|+++-..+. ..+..+|..|.++++-|. .....+.+++++. ....+..++ . .-..|+++
T Consensus 148 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~- 226 (487)
T 2w8n_A 148 GVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTD- 226 (487)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTC-
T ss_pred eEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhC-
Confidence 5788888876543332 467789999999999763 2345667777764 344455554 2 23444332
Q ss_pred CcCCCCCCCceEEeecCC
Q 026609 80 LVKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~ 97 (236)
+.++.+...|.
T Consensus 227 -------~~v~~V~fTGS 237 (487)
T 2w8n_A 227 -------PLVSKISFTGS 237 (487)
T ss_dssp -------TTEEEEEEEEC
T ss_pred -------CCcCEEEEeCC
Confidence 34667766554
No 99
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=27.42 E-value=1.3e+02 Score=25.07 Aligned_cols=78 Identities=14% Similarity=-0.027 Sum_probs=47.0
Q ss_pred CCcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeCh----HHHHHHHhcCC
Q 026609 12 LDYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVVP----PLILALAKHGL 80 (236)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~ 80 (236)
+--+++...|+++-..+. ..+..+|..|.++++-|.. ....+.+++++. ....+..++ ..-..|+.++
T Consensus 151 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~- 229 (503)
T 3iwj_A 151 PIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHP- 229 (503)
T ss_dssp ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCT-
T ss_pred CCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCC-
Confidence 335888888877665553 3467889999999997632 345566777664 333343333 3445565543
Q ss_pred cCCCCCCCceEEeecCC
Q 026609 81 VKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 81 ~~~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 230 -------~v~~I~FTGS 239 (503)
T 3iwj_A 230 -------DVDKVAFTGS 239 (503)
T ss_dssp -------TCCEEEEESC
T ss_pred -------CccEEEEECc
Confidence 3555555553
No 100
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=27.21 E-value=2.3e+02 Score=23.54 Aligned_cols=76 Identities=9% Similarity=-0.041 Sum_probs=44.3
Q ss_pred cEEEEecChhhHHh-HHHHHHHHhhcCcEEEEcCCC-C---HHHHHHHHHh------cC---ceEEEeChHHHHHHHhcC
Q 026609 14 YVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAKF-D---LEMFLRAIEK------HR---VTHIWVVPPLILALAKHG 79 (236)
Q Consensus 14 d~~l~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~~-~---~~~~~~~i~~------~~---~t~~~~~P~~~~~l~~~~ 79 (236)
-+++...|+++-.. ....+..+|..|.++++-|.. . ...+.+++.+ .. +.++.+-+..-..|..++
T Consensus 159 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~ 238 (500)
T 2j6l_A 159 GLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDE 238 (500)
T ss_dssp SEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCT
T ss_pred cEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCC
Confidence 57888888875432 224677899999999997642 2 2334444443 23 333444334556666553
Q ss_pred CcCCCCCCCceEEeecCC
Q 026609 80 LVKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 239 --------~vd~I~FTGS 248 (500)
T 2j6l_A 239 --------RVNLLSFTGS 248 (500)
T ss_dssp --------TCSEEEEESC
T ss_pred --------CcCEEEEECC
Confidence 3556655553
No 101
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=26.60 E-value=1.7e+02 Score=24.15 Aligned_cols=76 Identities=11% Similarity=0.003 Sum_probs=45.4
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCCC----CHHHHHHHHHhc--CceEEEeC----hHHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAKF----DLEMFLRAIEKH--RVTHIWVV----PPLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~--~~t~~~~~----P~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|.. ....+.+++.+. ....+..+ +.....|.+++
T Consensus 147 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p--- 223 (481)
T 3jz4_A 147 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNP--- 223 (481)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCT---
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCC---
Confidence 5777888876643332 3567899999999997642 345566777664 22233332 34556666653
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|.
T Consensus 224 -----~v~~I~fTGS 233 (481)
T 3jz4_A 224 -----LVRKLSFTGS 233 (481)
T ss_dssp -----TEEEEEEESC
T ss_pred -----CcCEEEEECC
Confidence 3555555553
No 102
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=26.48 E-value=1.6e+02 Score=24.80 Aligned_cols=66 Identities=12% Similarity=0.061 Sum_probs=41.2
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcC--ceEEEeC----hHHHHHHHhcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHR--VTHIWVV----PPLILALAKHG 79 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~--~t~~~~~----P~~~~~l~~~~ 79 (236)
-++....|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++.. ...+..+ +..-..|..++
T Consensus 172 GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p 248 (520)
T 3ed6_A 172 GVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHK 248 (520)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCT
T ss_pred cEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCC
Confidence 5788888877665553 346788999999999763 2 3455666766652 2223332 34566666553
No 103
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=24.48 E-value=1.6e+02 Score=24.66 Aligned_cols=75 Identities=17% Similarity=0.150 Sum_probs=44.8
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-CC---HHHHHHHHHhc--CceEEEeC----hHHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-FD---LEMFLRAIEKH--RVTHIWVV----PPLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~~--~~t~~~~~----P~~~~~l~~~~~~~ 82 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. .. ...+.+++.+. ....+..+ +..-..|+.++
T Consensus 154 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p--- 230 (505)
T 3prl_A 154 GVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHP--- 230 (505)
T ss_dssp SEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCT---
T ss_pred cEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCC---
Confidence 5788888876554442 346788999999999764 33 34566777764 33333333 23455666543
Q ss_pred CCCCCCceEEeecC
Q 026609 83 KFDLSSLKLVGSGA 96 (236)
Q Consensus 83 ~~~l~~lr~i~~~G 96 (236)
.++.+...|
T Consensus 231 -----~vd~I~FTG 239 (505)
T 3prl_A 231 -----GIDMITFTG 239 (505)
T ss_dssp -----TCCEEEEES
T ss_pred -----CCCEEEEeC
Confidence 355555555
No 104
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=24.32 E-value=1.8e+02 Score=24.37 Aligned_cols=76 Identities=13% Similarity=0.040 Sum_probs=46.1
Q ss_pred cEEEEecChhhHHh-HHHHHHHHhhcCcEEEEcCC----CCHHHHHHHHHhcC--ceEEEeCh----HHHHHHHhcCCcC
Q 026609 14 YVFLCVLPLFHVFG-LAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHR--VTHIWVVP----PLILALAKHGLVK 82 (236)
Q Consensus 14 d~~l~~~p~~~~~g-~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~--~t~~~~~P----~~~~~l~~~~~~~ 82 (236)
-+++...|+++-.. ....+..+|..|.++++-|. .....+.+++++.. ...+..++ ..-..|++++
T Consensus 164 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p--- 240 (515)
T 2d4e_A 164 GPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHP--- 240 (515)
T ss_dssp CCEEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCT---
T ss_pred CceEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCC---
Confidence 47778888755433 23567789999999999763 23556777777752 22333332 3456666553
Q ss_pred CCCCCCceEEeecCC
Q 026609 83 KFDLSSLKLVGSGAA 97 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~ 97 (236)
.++.+...|+
T Consensus 241 -----~vd~I~FTGS 250 (515)
T 2d4e_A 241 -----LVPLLTLTGE 250 (515)
T ss_dssp -----TCCEEEEESC
T ss_pred -----CcCEEEEeCc
Confidence 3556655553
No 105
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=23.79 E-value=1.4e+02 Score=24.77 Aligned_cols=66 Identities=12% Similarity=0.015 Sum_probs=40.2
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc--CceEEEeC----hHHHHHHHhcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH--RVTHIWVV----PPLILALAKHG 79 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~--~~t~~~~~----P~~~~~l~~~~ 79 (236)
-++....|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++. ....+..+ +.....|++++
T Consensus 150 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p 226 (484)
T 3ifg_A 150 GVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNP 226 (484)
T ss_dssp SSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCT
T ss_pred cEEEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCC
Confidence 4677777766544432 346789999999999763 2 345566677664 33333333 24566776654
No 106
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=22.89 E-value=1.8e+02 Score=21.65 Aligned_cols=86 Identities=13% Similarity=0.172 Sum_probs=51.0
Q ss_pred cEEEEecC--hhhHHhHHHHHHHHhhcCcEEEEc-CCCCHHHHHHHHHhcCceEEEeCh------HHHHHHHhcCCcCCC
Q 026609 14 YVFLCVLP--LFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVP------PLILALAKHGLVKKF 84 (236)
Q Consensus 14 d~~l~~~p--~~~~~g~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~P------~~~~~l~~~~~~~~~ 84 (236)
.+++..++ =.|..|....-...-..|-.++.. ...+++.+.+.+++.+++.+..+- ..+..+.+..++...
T Consensus 124 ~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~ 203 (258)
T 2i2x_B 124 GTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGI 203 (258)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCC
Confidence 34444444 357777733333333677777544 467889999999999998876433 224444443322221
Q ss_pred CCCCceEEeecCCCCCHHH
Q 026609 85 DLSSLKLVGSGAAPLGKEL 103 (236)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~ 103 (236)
.+ .++.||...+++.
T Consensus 204 ---~~-~v~vGG~~~~~~~ 218 (258)
T 2i2x_B 204 ---KI-PFACGGGAVNQDF 218 (258)
T ss_dssp ---CC-CEEEESTTCCHHH
T ss_pred ---CC-cEEEECccCCHHH
Confidence 23 3677888887654
No 107
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=22.35 E-value=2.4e+02 Score=23.34 Aligned_cols=89 Identities=11% Similarity=0.101 Sum_probs=50.3
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-CC---HHHHHHHHHhcC-----ceEEEeChHHHHHHHhcCCcC
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-FD---LEMFLRAIEKHR-----VTHIWVVPPLILALAKHGLVK 82 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~~---~~~~~~~i~~~~-----~t~~~~~P~~~~~l~~~~~~~ 82 (236)
=-+++...|+.+-..+. ..+..+|..|.++++-|. .. ...+.+++++.. +..+.+.......|+.+
T Consensus 124 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~---- 199 (484)
T 3ros_A 124 TGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLADIIAD---- 199 (484)
T ss_dssp CCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHHHHTS----
T ss_pred CceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHHHHhC----
Confidence 35888888876544432 356788999999999764 33 345666666652 23343433333335544
Q ss_pred CCCCCCceEEeecCCC-CCHHHHHHHHH
Q 026609 83 KFDLSSLKLVGSGAAP-LGKELMEECAK 109 (236)
Q Consensus 83 ~~~l~~lr~i~~~G~~-~~~~~~~~~~~ 109 (236)
+.++.+...|.. .-..+.+...+
T Consensus 200 ----p~vd~I~fTGS~~~G~~i~~~aa~ 223 (484)
T 3ros_A 200 ----PRIQGVALTGSERGGSAVAEAAGK 223 (484)
T ss_dssp ----TTEEEEEEESCHHHHHHHHHHHHH
T ss_pred ----CCcCEEEEECCHHHHHHHHHHHhc
Confidence 336666666643 23334444333
No 108
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=22.03 E-value=1.2e+02 Score=25.39 Aligned_cols=66 Identities=15% Similarity=0.130 Sum_probs=40.2
Q ss_pred cEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhcC--ceEEEeCh----HHHHHHHhcC
Q 026609 14 YVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKHR--VTHIWVVP----PLILALAKHG 79 (236)
Q Consensus 14 d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~~--~t~~~~~P----~~~~~l~~~~ 79 (236)
-+++...|+.+-..+. ..+..+|..|.++++-|. . ....+.+++.+.. ...+..++ .....|++++
T Consensus 149 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p 225 (506)
T 3rh9_A 149 GVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHK 225 (506)
T ss_dssp CSEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCT
T ss_pred eEEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCC
Confidence 4677777766543332 346789999999999763 2 3456677777652 22333332 3556666653
No 109
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=21.97 E-value=2.9e+02 Score=22.64 Aligned_cols=76 Identities=17% Similarity=0.058 Sum_probs=45.0
Q ss_pred cEEEEecChhhHHhH-HHHHHHHhhcCcEEEEcCCC-CH---HH----HHHHHHhc--CceEEEeC----hHHHHHHHhc
Q 026609 14 YVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF-DL---EM----FLRAIEKH--RVTHIWVV----PPLILALAKH 78 (236)
Q Consensus 14 d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~~~~~~~-~~---~~----~~~~i~~~--~~t~~~~~----P~~~~~l~~~ 78 (236)
-+++...|+.+-..+ ...+..+|..|.++++-|.. .+ .. +.+++.+. ....+..+ +.....|+++
T Consensus 110 GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~ 189 (464)
T 3k9d_A 110 GVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKH 189 (464)
T ss_dssp CEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHC
T ss_pred eEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhC
Confidence 578888887655444 35678899999999997643 22 22 22444554 22233333 3456777765
Q ss_pred CCcCCCCCCCceEEeecCC
Q 026609 79 GLVKKFDLSSLKLVGSGAA 97 (236)
Q Consensus 79 ~~~~~~~l~~lr~i~~~G~ 97 (236)
+ .++.+...|.
T Consensus 190 ~--------~vd~I~fTGs 200 (464)
T 3k9d_A 190 K--------DTAVILATGG 200 (464)
T ss_dssp T--------TEEEEEECSC
T ss_pred C--------CCCEEEEeCC
Confidence 3 3555666554
No 110
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=21.35 E-value=2e+02 Score=23.86 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=32.3
Q ss_pred CcEEEEecChhhHHhHH-HHHHHHhhcCcEEEEcCC-C---CHHHHHHHHHhc
Q 026609 13 DYVFLCVLPLFHVFGLA-VITCGQLQKGSCIILMAK-F---DLEMFLRAIEKH 60 (236)
Q Consensus 13 ~d~~l~~~p~~~~~g~~-~~~~~~l~~G~~~~~~~~-~---~~~~~~~~i~~~ 60 (236)
--+++...|+.+-..+. ..+..+|..|.++++-|. . ....+.+++++.
T Consensus 131 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a 183 (486)
T 3pqa_A 131 VGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENA 183 (486)
T ss_dssp CSEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred ccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHH
Confidence 35788888877665443 346788999999999663 2 244556666554
Done!