BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026612
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55909|Y305_SYNY3 TVP38/TMEM64 family membrane protein slr0305 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0305 PE=3 SV=1
Length = 209
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 117 LPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAILR 176
LP S AG+ FG G + + +G + + +G +L R GW+ K +
Sbjct: 35 LPGSILTLGAGVVFGVILGSIYVFIGATLGATAAFLVG-RYLAR--GWVAKKIAGNQKFK 91
Query: 177 AAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIY 234
A E + V L R+SP FP+ + NY T+V Y +GSL GM+P + +Y
Sbjct: 92 AIDEAVGKEGLKIVILTRLSPVFPFNLLNYAYGITNVSLKDYVIGSL-GMIPGTIMYVY 149
>sp|Q3U145|TMM64_MOUSE Transmembrane protein 64 OS=Mus musculus GN=Tmem64 PE=2 SV=1
Length = 381
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 91 WETTTFSTPVLAVLVFASVAL----FPTLLL--------------------PSSPSMW-- 124
W + VLA L FAS+AL LLL S P W
Sbjct: 120 WCRSLVLVCVLAALCFASLALVRRYLQHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGY 179
Query: 125 -VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHR-----IQGWLEKYPKKAAILRAA 178
V + GY +GF+L M + VG+ + FI R + ++ K +A++R
Sbjct: 180 IVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVAARIQNSDKLSAVIRVV 239
Query: 179 GEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIY 234
G+ + VAL R++P P+ + N T V Y + S G++P + Y
Sbjct: 240 EGGS---GLKVVALARLTPIPFGLQNAVFSITDVPLPSYLMASSAGLLPTQLLNSY 292
>sp|Q6BQJ1|TVP38_DEBHA Golgi apparatus membrane protein TVP38 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=TVP38 PE=3 SV=1
Length = 383
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 91 WETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLP 150
W F +L LVF + FP LL S+ SM +AGM +G+ G++L+ A G
Sbjct: 92 WHGLKFGQGLLFTLVF--MVGFPPLLGFSALSM-LAGMVYGFVHGWILLACASISGSFCS 148
Query: 151 YFIGSHFLH----RIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYC 206
+ + + LH R+ +K+ + ILR + + F + L+R+ P PY + N
Sbjct: 149 FLVFRYLLHSRAERLMNSNKKFRAFSEILRE--DSSLF----ILVLLRLCPLPYSLSNGA 202
Query: 207 AVAT-HVKYGPYFLGSLVGMVPEIFVTIY 234
A + YFL SL+ P++ + I+
Sbjct: 203 LAAIPELPATTYFLASLI-TSPKLMIHIF 230
>sp|Q6YI46|TMM64_HUMAN Transmembrane protein 64 OS=Homo sapiens GN=TMEM64 PE=1 SV=2
Length = 380
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 35/176 (19%)
Query: 91 WETTTFSTPVLAVLVFASVALFPTLL------------------------LPSSPSMW-- 124
W + VLA L FAS+AL L + S P W
Sbjct: 119 WCRSLVLVCVLAALCFASLALVRRYLHHLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGY 178
Query: 125 -VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHR-----IQGWLEKYPKKAAILRAA 178
V + GY +GF+L M + VG+ + FI R + ++ K +A++R
Sbjct: 179 IVLNVAAGYLYGFVLGMGLMMVGVLIGTFIAHVVCKRLLTAWVAARIQSSEKLSAVIRVV 238
Query: 179 GEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIY 234
G+ + VAL R++P P+ + N T + Y + S VG++P + Y
Sbjct: 239 EGGS---GLKVVALARLTPIPFGLQNAVFSITDLSLPNYLMASSVGLLPTQLLNSY 291
>sp|P06568|YTXB_BACSU TVP38/TMEM64 family membrane protein YtxB OS=Bacillus subtilis
(strain 168) GN=ytxB PE=3 SV=1
Length = 213
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 97 STPVLAVLVFASVALF-PTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGS 155
S V A L+F +++ P +L P S G+ FG G L + ++ +F
Sbjct: 40 SFGVFAPLMFIGISIVRPLVLFPVSVISIAGGLAFGPLLGTLYTLFGSMCASAVSFFAAG 99
Query: 156 HFLHRIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYG 215
F + G Y + AI + + +F+ F L+RI P + +Y A ++VK
Sbjct: 100 LFSAKKNG---HYERLEAIQKQMEDNGFFYIF----LLRILPINFDFVSYAAGLSNVKAL 152
Query: 216 PYFLGSLVGMVP 227
PYF + VG++P
Sbjct: 153 PYFAATAVGIIP 164
>sp|A5DH87|TVP38_PICGU Golgi apparatus membrane protein TVP38 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=TVP38 PE=3 SV=2
Length = 349
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 17/174 (9%)
Query: 65 VGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMW 124
+G+L +F K++ ++ VI +W +L +LVF FP L+ S+ S+
Sbjct: 62 IGVLVLIFHKYL----IELLVIISDDWAKLPGGRLILFLLVF--FVGFPPLIGYSALSL- 114
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLH----RIQGWLEKYPKKAAILRAAGE 180
+AGM +G+ +G+ L+ SA G + + + +FL R+ EK+ A ILR +
Sbjct: 115 LAGMVYGFPYGWPLLASASVSGSFVAFLVFRYFLRSQGERLVNSNEKFRAFAEILRE--D 172
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIY 234
+ F + LIR+ P PY + N A +LG+ V P++ + ++
Sbjct: 173 SSLF----LLVLIRLCPLPYSLSNGALAAIPELSAWVYLGASVITSPKMLIHLF 222
>sp|Q8L586|Y4958_ARATH Uncharacterized membrane protein At4g09580 OS=Arabidopsis thaliana
GN=At4g09580 PE=1 SV=1
Length = 287
Score = 38.9 bits (89), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 103 VLVFASVALF-PTLLLPSSPSM-WVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHR 160
+L + S +F T ++P + M +AG FG GF+L++ G +F+
Sbjct: 112 ILGYCSTYIFMQTFMIPGTIFMSLLAGALFGVVRGFVLVVLNATAGACSCFFLSKLVGRP 171
Query: 161 IQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYFL 219
+ WL +P+K +A + +RI+P P + N + + + +FL
Sbjct: 172 LVNWL--WPEKLRFFQAEIAKRRDRLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFL 229
Query: 220 GSLVGMVPEIFVTI 233
+LVG++P ++T+
Sbjct: 230 ATLVGLMPASYITV 243
>sp|A2Q9P2|TVP38_ASPNC Golgi apparatus membrane protein tvp38 OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=tvp38 PE=3 SV=2
Length = 415
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 23/190 (12%)
Query: 51 KVWYWVKL----AFFLTSVGLLAAVFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVF 106
K+ +W ++ AF L + LL F+ + G F+ + + WE + + VL + VF
Sbjct: 75 KMNFWQRVGAVAAFLLAN--LLGIGFLVFTGKVFIWLQPV-AAQWEHSPLAYGVLWLCVF 131
Query: 107 ASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQ 162
FP L+ S+ +AG FG G+LL SA +G + + + S F+HR+
Sbjct: 132 --FVSFPPLVGWSTFGT-MAGYIFGIWKGWLLYASATVLGSTCSFIVSRTILSKFVHRLM 188
Query: 163 GWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSL 222
+++ + L+ G + + +IR+ P PY + N AV+T P G
Sbjct: 189 ERDKRFAALSLTLKYDG-------LKLLCMIRLCPLPYSVCN-GAVSTFPTVQPLMYGLA 240
Query: 223 VGMV-PEIFV 231
++ P++ V
Sbjct: 241 TALISPKLLV 250
>sp|Q0CT01|TVP38_ASPTN Golgi apparatus membrane protein tvp38 OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=tvp38 PE=3 SV=1
Length = 418
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
VAG FG G+LL SA +G + + + S F+HR+ +++ A L+ G
Sbjct: 148 VAGYIFGVWKGWLLYASATVLGSTASFIVSRTILSKFVHRLMERDKRFAALALTLKYDG- 206
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFV 231
+ + +IR+ P PY + N AV+T P G ++ P++ V
Sbjct: 207 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLTYGLATAIITPKLLV 251
>sp|Q6CXJ8|TVP38_KLULA Golgi apparatus membrane protein TVP38 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=TVP38 PE=3 SV=1
Length = 305
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 98 TPVLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFG--FLLIMSAVAVGISLPYFIGS 155
TP++ +L+ +V+ FP L+ S S+ G+ +G F F+L MS V +G L + +
Sbjct: 112 TPLVLMLLILAVS-FPPLIGYSFLSL-STGLIYGLSFKGWFILAMSTV-IGSVLSFTVFQ 168
Query: 156 HFLHRIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPFPYIIYN 204
LH L + K + + +GN + +ALIR+ PFPY N
Sbjct: 169 RLLHSHAERLIRMNPKLEAVSSVLQGN--DSYWMIALIRLCPFPYSFIN 215
>sp|Q5B7A1|TVP38_EMENI Golgi apparatus membrane protein tvp38 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=tvp38 PE=3 SV=1
Length = 410
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSH-----FLHRIQGWLEKYPKKAAILRAAG 179
V+G FG G+LL SA +G S+ FI S F+HR+ +++ A L+ G
Sbjct: 147 VSGFIFGVWKGWLLYASATVLG-SICSFIASRTVLSKFVHRLVERDKRFAALALTLKYDG 205
Query: 180 EGNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFV 231
+ + +IR+ P PY I N A++T P G ++ P++ V
Sbjct: 206 -------LKLLCMIRLCPLPYSICN-GAISTFPTVQPLMYGLATAIISPKLLV 250
>sp|Q502G2|T41AA_DANRE Transmembrane protein 41A-A OS=Danio rerio GN=tmem41aa PE=2 SV=1
Length = 281
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Query: 83 KEVIPIINWETTTFSTPVLAVLVFASVALFP-TLLLPSSPSMWV-AGMTFGYGFGFLLIM 140
KE+ ++ + T + VL L+F S L+ +P S + + AG FG FG LL
Sbjct: 69 KEMAELLQFYKTEHTGYVL--LLFCSAYLYKQAFAIPGSSFLNILAGALFGTWFGLLLTC 126
Query: 141 SAVAVGISLPYFIGSHF-LHRIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPF- 198
VG +L + + F H I ++ +P K A+L+ E N F + +R P
Sbjct: 127 VLTTVGATLCFLLSQAFGKHHI---VKLFPDKVAMLQKKVEENRSSLFFFLLFLRFFPMS 183
Query: 199 PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYT 235
P N + ++ +F+ +G++P F+ + T
Sbjct: 184 PNWFLNMTSPILNIPVTLFFMAVFIGLMPYNFICVQT 220
>sp|P76219|YDJX_ECOLI TVP38/TMEM64 family membrane protein YdjX OS=Escherichia coli
(strain K12) GN=ydjX PE=3 SV=2
Length = 236
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 115 LLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAI 174
LLLP S + G+ FG G LL + A + S + + + +L R L KY +
Sbjct: 61 LLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLL-ARWLGR--DLLLKYVGHSNT 117
Query: 175 LRAAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTI 233
+A +G + + L R+ P FPY I NY T + + PY L S + +P I I
Sbjct: 118 FQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWPYTLISALTTLPGI--VI 175
Query: 234 YT 235
YT
Sbjct: 176 YT 177
>sp|A1CIM4|TVP38_ASPCL Golgi apparatus membrane protein tvp38 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tvp38 PE=3 SV=1
Length = 419
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
VAG FG G+LL +A +G + + + S F++R+ +++ A L+ G
Sbjct: 148 VAGFIFGIWKGWLLYATATVLGSTCSFIVSRTVLSKFVNRMMERDKRFAALALTLKYDG- 206
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFV 231
+ + +IR+ P PY + N AV+T P G ++ P++ V
Sbjct: 207 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGLATAIITPKLLV 251
>sp|Q2UUJ9|TVP38_ASPOR Golgi apparatus membrane protein tvp38 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tvp38 PE=3 SV=2
Length = 414
Score = 34.7 bits (78), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 71 VFIKWVGPFFMDKEVIPIINWETTTFSTPVLAVLVFASVALFPTLLLPSSPSMWVAGMTF 130
VFI W+GP WE + + VL + VF FP L+ S+ ++G F
Sbjct: 103 VFI-WLGPVAE--------QWEQSVVAYTVLWLCVF--FVSFPPLVGWSTFGT-ISGYIF 150
Query: 131 GYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGEGNWFHQ 186
G G+ L SA +G + + + S F++R+ +++ A L+ G
Sbjct: 151 GVWKGWFLYASATVLGSTCSFVVSRTILSKFVNRMMERDKRFAALALTLKYDG------- 203
Query: 187 FRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFV 231
+ + +IR+ P PY + N AV+T P G +V P++ V
Sbjct: 204 LKLLCMIRLCPLPYSVCN-GAVSTFPTVQPLMYGLATAIVTPKLLV 248
>sp|P97478|COQ7_MOUSE Ubiquinone biosynthesis protein COQ7 homolog OS=Mus musculus
GN=Coq7 PE=2 SV=3
Length = 217
Score = 34.3 bits (77), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 113 PTLLLPSSPSMW-VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKK 171
PT+L+P +W VAG G G L A+A +++ I +H+ ++I+ +E+ P+K
Sbjct: 108 PTVLMP----LWNVAGFALGAGTALLGKEGAMACTVAVEESIANHYNNQIRMLMEEDPEK 163
>sp|A1CW44|TVP38_NEOFI Golgi apparatus membrane protein tvp38 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 34.3 bits (77), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
+AG FG G++L +A +G + + + S F++R+ +++ A L+ G
Sbjct: 147 IAGFIFGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDG- 205
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFV 231
+ + +IR+ P PY + N AV+T P G ++ P++ V
Sbjct: 206 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGLATALITPKLLV 250
>sp|Q9D8U2|TM41A_MOUSE Transmembrane protein 41A OS=Mus musculus GN=Tmem41a PE=2 SV=1
Length = 264
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAILRAAGEGNWF 184
+AG FG G LL +VG + Y + S F ++ + +P K A+L+ E N
Sbjct: 94 LAGALFGPWLGLLLCCVLTSVGATGCYLLSSLFGKQLV--ISYFPDKVALLQKKVEENRN 151
Query: 185 HQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYT 235
F + +R+ P P N A ++ +F L+G++P F+ + T
Sbjct: 152 SLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQT 203
>sp|Q96HV5|TM41A_HUMAN Transmembrane protein 41A OS=Homo sapiens GN=TMEM41A PE=2 SV=1
Length = 264
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRIQGWLEKYPKKAAILRAAGEGNWF 184
+AG FG G LL +VG + Y + S F ++ + +P K A+L+ E N
Sbjct: 94 LAGALFGPWLGLLLCCVLTSVGATCCYLLSSIFGKQLV--VSYFPDKVALLQRKVEENRN 151
Query: 185 HQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTIYT 235
F + +R+ P P N A ++ +F L+G++P F+ + T
Sbjct: 152 SLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFSVLIGLIPYNFICVQT 203
>sp|P54449|YQED_BACSU Uncharacterized protein YqeD OS=Bacillus subtilis (strain 168)
GN=yqeD PE=4 SV=1
Length = 208
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 100 VLAVLVFASVALFPTLLLPSSPSMWVAGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLH 159
+ ++L+ A+ FP ++P + + G FG G + ++ +G L +F+ +
Sbjct: 38 LFSMLLIAADVFFP--IVPFALIAALNGAVFGTANGIWITLTGSMLGTILLFFLARY--- 92
Query: 160 RIQGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISP-FPYIIYNYCAVATHVKYGPYF 218
+ W K + +++ + F V L R+ P P ++ N + V++ +F
Sbjct: 93 SFRDWARKKVQAYPAIQSYEASFNKNAFTAVLLGRLIPVIPSLVMNVICGLSQVRWHVFF 152
Query: 219 LGSLVGMVPEIFVT 232
SL+G +P I V
Sbjct: 153 FASLIGKIPNIVVV 166
>sp|Q4WQJ2|TVP38_ASPFU Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tvp38 PE=3 SV=1
Length = 418
Score = 32.0 bits (71), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
++G +G G++L +A +G + + + S F++R+ +++ A L+ G
Sbjct: 147 ISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDG- 205
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFV 231
+ + +IR+ P PY + N AV+T P G ++ P++ V
Sbjct: 206 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGLATALITPKLLV 250
>sp|B0Y4Q5|TVP38_ASPFC Golgi apparatus membrane protein tvp38 OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=tvp38 PE=3
SV=1
Length = 418
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 125 VAGMTFGYGFGFLLIMSAVAVGISLPYFIG----SHFLHRIQGWLEKYPKKAAILRAAGE 180
++G +G G++L +A +G + + + S F++R+ +++ A L+ G
Sbjct: 147 ISGFIYGIWKGWILYATATVLGSTCSFIVSRTILSKFVNRMMERDKRFAALALTLKYDG- 205
Query: 181 GNWFHQFRTVALIRISPFPYIIYNYCAVATHVKYGPYFLGSLVGMV-PEIFV 231
+ + +IR+ P PY + N AV+T P G ++ P++ V
Sbjct: 206 ------LKLLCMIRLCPLPYSVCN-GAVSTFPTVHPLMYGLATALITPKLLV 250
>sp|Q60492|SGMR1_CAVPO Sigma non-opioid intracellular receptor 1 OS=Cavia porcellus
GN=SIGMAR1 PE=1 SV=1
Length = 223
Score = 31.6 bits (70), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Query: 46 RWSCGKVWYWVKLAFFLTSVGLLAAVFIKWVGP---FFMDKEVIPIINWETTTFSTPVLA 102
+W+ G+ W WV A FL +V +L + W+G F +E+ + +
Sbjct: 2 QWAVGRRWLWV--ALFLAAVAVLTQIVWLWLGTQNFVFQREEIAQLARQYAGLDHELAFS 59
Query: 103 VLVFASVALFPTLLLPSSPSMWV 125
L+ L P +LP WV
Sbjct: 60 KLIVELRRLHPVHVLPDEELQWV 82
>sp|Q8MXN7|TM41_DICDI Transmembrane protein 41 homolog OS=Dictyostelium discoideum
GN=DDB_G0275543 PE=3 SV=2
Length = 334
Score = 31.6 bits (70), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 124 WVAGMTFGYGFGFLLIMSAVAVGIS----LPYFIGSHFLHRIQGWLEKYPKKAAILRAAG 179
+++G FG GF L+ +G + + Y+IG + + ++ +P K + +
Sbjct: 182 FLSGGLFGLKVGFPLVCFVATLGATFSYLISYYIGRNLVRKL------FPDKLKLFSDSL 235
Query: 180 EGNWFHQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLGSLVGMVPEIFVTI 233
+ + +RI+PF P N + V + +G+ +G++P F+ +
Sbjct: 236 SQKRDNLLNYIVFLRITPFLPNWFINLASPLLDVPIHTFAIGTFIGIMPATFLAV 290
>sp|Q08D99|TM41A_BOVIN Transmembrane protein 41A OS=Bos taurus GN=TMEM41A PE=2 SV=1
Length = 264
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 5/135 (3%)
Query: 104 LVFASVALFP-TLLLPSSPSMWV-AGMTFGYGFGFLLIMSAVAVGISLPYFIGSHFLHRI 161
L+F S L+ + +P S + V AG FG G LL +VG + Y + S F ++
Sbjct: 71 LLFCSAYLYKQSFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATGCYLLSSVFGKQL 130
Query: 162 QGWLEKYPKKAAILRAAGEGNWFHQFRTVALIRISPF-PYIIYNYCAVATHVKYGPYFLG 220
+ +P K A+L+ E N F + +R+ P P N A ++ +F
Sbjct: 131 VVF--YFPDKVALLQKKVEENRNGLFFFLLFLRLFPMTPNWFLNLSAPILNIPIVQFFFS 188
Query: 221 SLVGMVPEIFVTIYT 235
L+G++P F+ + T
Sbjct: 189 VLIGLIPYNFICVQT 203
>sp|P36684|Y703_HAESO Uncharacterized protein HI0703 homolog OS=Haemophilus somnus PE=4
SV=1
Length = 191
Score = 31.2 bits (69), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 89 INWETTTFSTPVLAVLVFASVALFP----TLLLPSSPSMWVAGMTFGYGFGFLLIMSAVA 144
+ W F+T L + F FP +L+P S + F F M++ A
Sbjct: 12 MQWANHRFATFWLTFVSFIEAIFFPIPPDVMLIPMS----INKPKCATKFAFYAAMAS-A 66
Query: 145 VGISLPYFIGSHFLHRIQGWLEKYPKKAAILRAAGEGNWFHQFR--TVALIRISPFPYII 202
+G ++ Y +G + IQ +++++ + A +WF ++ V + SP PY I
Sbjct: 67 IGGAIGYGLGYYAFDFIQSYIQQWGYQQHWETAL---SWFKEWGIWVVFVAGFSPIPYKI 123
Query: 203 YNYCAVATHVKYGPYFLGSLVGMVPE 228
+ CA + + P+ L + + +
Sbjct: 124 FTICAGVMQMAFLPFLLTAFISRIAR 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.143 0.467
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,638,522
Number of Sequences: 539616
Number of extensions: 4357816
Number of successful extensions: 12896
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 12877
Number of HSP's gapped (non-prelim): 46
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)