Query 026616
Match_columns 236
No_of_seqs 119 out of 1181
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 10:21:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026616.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026616hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10447 HflBKC-binding inner 100.0 3.6E-42 7.8E-47 290.6 26.1 202 18-235 11-216 (219)
2 cd06181 BI-1-like BAX inhibito 100.0 5.3E-39 1.2E-43 271.5 27.6 204 24-235 2-212 (212)
3 KOG2322 N-methyl-D-aspartate r 100.0 2.2E-40 4.8E-45 276.8 16.2 198 17-220 37-237 (237)
4 COG0670 Integral membrane prot 100.0 6.4E-37 1.4E-41 261.2 27.0 207 19-233 15-227 (233)
5 PF01027 Bax1-I: Inhibitor of 100.0 8.6E-34 1.9E-38 237.7 25.6 197 26-232 2-205 (205)
6 KOG1629 Bax-mediated apoptosis 100.0 3.4E-32 7.5E-37 220.9 18.3 200 18-234 18-222 (235)
7 KOG1630 Growth hormone-induced 99.8 2.2E-18 4.7E-23 145.4 14.7 208 17-234 105-331 (336)
8 PF12811 BaxI_1: Bax inhibitor 99.7 3.2E-14 7E-19 123.5 24.7 200 20-234 51-270 (274)
9 COG4760 Predicted membrane pro 98.8 6.9E-07 1.5E-11 74.2 18.6 192 26-233 53-271 (276)
10 PF09925 DUF2157: Predicted me 89.7 8.5 0.00018 30.3 13.4 87 24-116 28-114 (145)
11 KOG3488 Dolichol phosphate-man 66.3 42 0.0009 23.4 7.0 54 180-233 10-75 (81)
12 PRK10245 adrA diguanylate cycl 30.9 4E+02 0.0088 24.1 17.7 24 26-49 31-54 (366)
13 COG2917 Intracellular septatio 26.7 3.7E+02 0.0079 22.2 9.0 17 210-226 121-137 (180)
14 PF14362 DUF4407: Domain of un 24.1 4.9E+02 0.011 22.7 11.0 14 98-111 87-100 (301)
15 KOG3103 Rab GTPase interacting 22.5 5.1E+02 0.011 22.5 7.6 61 119-183 144-204 (249)
16 PF14256 YwiC: YwiC-like prote 20.8 4E+02 0.0086 20.5 14.9 59 90-154 55-113 (129)
17 PF10777 YlaC: Inner membrane 20.5 4.6E+02 0.0099 21.1 7.1 8 57-64 30-37 (155)
No 1
>PRK10447 HflBKC-binding inner membrane protein; Provisional
Probab=100.00 E-value=3.6e-42 Score=290.59 Aligned_cols=202 Identities=23% Similarity=0.357 Sum_probs=175.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHH
Q 026616 18 IEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLL 97 (236)
Q Consensus 18 ~~~~~~r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~~~~~p~~~~~l 97 (236)
.++...+++|+||||.+++.+++.+++++++....+. +++ ..++.+++++++++...+ +|++|.|+.++
T Consensus 11 ~~~~~~~~~~Lr~vY~lLa~tl~~aa~ga~v~~~~~~-------~~~---~~~~~~~~~~gl~~~~~~-~~~~~~~~~ll 79 (219)
T PRK10447 11 RTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLML-------PSP---GLILTLVGMYGLMFLTYK-TANKPTGILSA 79 (219)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-------chh---HHHHHHHHHHHHHHHHHH-HHcCCHHHHHH
Confidence 3344468899999999999999999999988764321 111 123445666666665444 57899999999
Q ss_pred HHHHHHHHHHHHHHHHhc----chhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhc
Q 026616 98 VLFTILLSFTLGVACAFS----KGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFR 173 (236)
Q Consensus 98 ~~ft~~~g~~l~~~~~~~----~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~ 173 (236)
+.||.++|+++||++.++ +|++|.+|+++|+++|++++++++ +||||++++|+.+++++++++++++.|+|++
T Consensus 80 f~fT~~~G~~lg~i~~~y~~~~~~~iV~~A~~~Ta~iF~~ls~~a~---~tk~Dfs~lg~~L~~~l~~li~~~l~~~F~~ 156 (219)
T PRK10447 80 FAFTGFLGYILGPILNTYLSAGMGDVIALALGGTALVFFCCSAYVL---TTRKDMSFLGGMLMAGIVVVLIGMVANIFLQ 156 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999865 579999999999999999999998 9999999999999999999999999999997
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 026616 174 VGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLDIVNIFIAFLQMLGAT 235 (236)
Q Consensus 174 ~~~~~~~i~~~~g~~lf~~~i~~Dtq~i~~~~~~~dyv~~Al~LylDiinLF~~iL~il~~~ 235 (236)
++..+.+++++|+++||+|++||||+|+|+ ++|||+.||++||+|++|+|+++|||+++.
T Consensus 157 -s~~~~~~~s~~g~llfsgyilyDTq~Ii~~-g~~dyi~aAl~LYlDiinlFl~lL~il~~~ 216 (219)
T PRK10447 157 -LPALHLAISAVFILISSGAILFETSNIIHG-GETNYIRATVSLYVSLYNIFVSLLSILGFA 216 (219)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 567899999999999999999999999975 689999999999999999999999999864
No 2
>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family. Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.
Probab=100.00 E-value=5.3e-39 Score=271.52 Aligned_cols=204 Identities=40% Similarity=0.701 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH---hhhccCCcHHHHHHHHH
Q 026616 24 RWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPL---FAYRKRHPWNFVLLVLF 100 (236)
Q Consensus 24 r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l---~~~~~~~p~~~~~l~~f 100 (236)
|++|+||||++++.|+++|+++++.....|+.++ ...++| ..++..++.++....+ +.++|++|.|+.++..|
T Consensus 2 ~~~fl~kVY~~l~~~l~~t~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ll~~f 77 (212)
T cd06181 2 RRGFLRKVYGLLALQLLVTALVAYLGMFSPPLRN-VLSNTP---LGWLLLLAFLGLVILLFCCRIKRRSSPANLILLFLF 77 (212)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHhccH---HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 7899999999999999999999999988887766 445554 3344444444333222 44578899999999999
Q ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Q 026616 101 TILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHM 180 (236)
Q Consensus 101 t~~~g~~l~~~~~~~~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~~~~~~~~ 180 (236)
|+.+|+++++.+..++++.+.+|+..|+++|++++++++ ++|||++++|+.++.++.++++.+++++|++ ++..+.
T Consensus 78 t~~~g~~l~~~~~~~~~~~i~~A~~~T~~if~~l~l~a~---~tk~d~~~~g~~l~~~~~~l~~~~l~~~f~~-~~~~~~ 153 (212)
T cd06181 78 TALMGVTLGPILSVYTAASVLQAFGITAAVFGGLSLYAL---TTKRDFSFLGGFLFMGLIVLIVASLVNIFLQ-SPALQL 153 (212)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hccccHHhHHHHHHHHHHHHHHHHHHHHHHh-cHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999987 567789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 026616 181 IYGLMGAIIFSGYIVYDTNNLIKRY----TYDEYITAAIELYLDIVNIFIAFLQMLGAT 235 (236)
Q Consensus 181 i~~~~g~~lf~~~i~~Dtq~i~~~~----~~~dyv~~Al~LylDiinLF~~iL~il~~~ 235 (236)
+++++|+++|++|++||||+++++. ++|||+.||+++|+|++|+|+++||+++++
T Consensus 154 ~~~~~g~~lf~~~l~~Dtq~i~~~~~~~~~~~d~i~~al~LylDiinlF~~iL~il~~~ 212 (212)
T cd06181 154 AISALGVLLFSGYILYDTQLIIGGYRLYLSPDDYILAALSLYLDIINLFLSLLRILGSR 212 (212)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCcchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999765 389999999999999999999999999864
No 3
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=276.85 Aligned_cols=198 Identities=39% Similarity=0.736 Sum_probs=181.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhh---hccCCcHH
Q 026616 17 MIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFA---YRKRHPWN 93 (236)
Q Consensus 17 ~~~~~~~r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~---~~~~~p~~ 93 (236)
.++|+++|++|+||||+++..|+++|.+++.....+++.++|+.+|+| ++|.+.+..++..+.+.| .|||+|.|
T Consensus 37 ~~~~~~iR~~FiRKVYsIl~~QLl~T~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~vf~vt~l~l~c~~~~r~k~P~N 113 (237)
T KOG2322|consen 37 AFCDQSIRWGFIRKVYSILSIQLLITLAVVAIFTVHEPVQDFVRRNPA---LYWALIVVFIVTYLSLACCEGLRRKSPVN 113 (237)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHheeEEEEccHHHHHHHhCcH---HHHHHHHHHHHHHHHHHccCcccccCcHH
Confidence 478899999999999999999999999999999889999999999998 556666666665555544 57899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhc
Q 026616 94 FVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFR 173 (236)
Q Consensus 94 ~~~l~~ft~~~g~~l~~~~~~~~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~ 173 (236)
++++.+||.+++++.|..++++++.+|++|+.+|+++++++++|++ ++|+|++..++.++..+++++++|+...+++
T Consensus 114 ~ilL~iFT~a~s~~~g~~~a~~~~~~VL~Al~IT~~V~~slt~~t~---qtK~DFt~~~~~l~~~l~vl~~~g~I~~~f~ 190 (237)
T KOG2322|consen 114 LILLGIFTLAEAFMTGLVTAFYDAKVVLLALIITTVVVLSLTLFTL---QTKYDFTSLGGFLFALLIVLLLFGLIFLFFP 190 (237)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhheeeEEEEEE---eeccchhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998 9999999999999999999999996555555
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 026616 174 VGKVAHMIYGLMGAIIFSGYIVYDTNNLIKRYTYDEYITAAIELYLD 220 (236)
Q Consensus 174 ~~~~~~~i~~~~g~~lf~~~i~~Dtq~i~~~~~~~dyv~~Al~LylD 220 (236)
.+.+.+.+++.+|+++|++|++||||++.++.+||||+.||+++|+|
T Consensus 191 ~~~~~~~vya~lgAllf~~yl~~Dtqllm~~~SPEEYI~aA~~lYlD 237 (237)
T KOG2322|consen 191 YGPILVMVYAALGALLFCGYLVYDTQLLMGRISPEEYIFAALNLYLD 237 (237)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHhhhHHHhccCCHHHHHHHHHHhhcC
Confidence 57888999999999999999999999999999999999999999998
No 4
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=100.00 E-value=6.4e-37 Score=261.21 Aligned_cols=207 Identities=30% Similarity=0.458 Sum_probs=179.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhhh-ccCCcHHHHHH
Q 026616 19 EPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAY-RKRHPWNFVLL 97 (236)
Q Consensus 19 ~~~~~r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~-~~~~p~~~~~l 97 (236)
++++.|++|++|||.+++.+++.++++++.....++..... .+++ ..++..+..+..++..+.+ +|+.|.+...+
T Consensus 15 ~~~~~~~~f~~~vY~~~~~~L~~t~~~a~~~~~~~~~~~~~-~~~~---~~~vl~~a~l~~~~~~~~~~~~s~~~~~~~~ 90 (233)
T COG0670 15 KSDLGLNTFLRKVYLLLALGLLVTAVGAALAAYLLFNLGLL-SLSP---PGFVLIIAGLAGVFFLSRKINKSSPTALILF 90 (233)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cccc---HHHHHHHHHHHHHHHHHHHhccCcchHHHHH
Confidence 33567789999999999999999999998876655443321 3343 4456666666666666553 45889999999
Q ss_pred HHHHHHHHHHHHHHHHhcchhH----HHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhc
Q 026616 98 VLFTILLSFTLGVACAFSKGKI----ILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFR 173 (236)
Q Consensus 98 ~~ft~~~g~~l~~~~~~~~~~i----v~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~ 173 (236)
..||..+|++++++...|.+.. +.+|+..|+.+|.++++|++ ++|||++.+++.++.+++++++++++|+|.+
T Consensus 91 ~~~t~l~G~tL~~i~~~Y~~~~~~~~i~~af~~t~~~F~~ls~~g~---~tk~Dls~l~~~l~~aligLiiasvvn~Fl~ 167 (233)
T COG0670 91 FVYTALVGLTLSPILLVYAAISGGDAIAAAFGITALVFGALSLYGY---TTKRDLSSLGSFLFMALIGLIIASLVNIFLG 167 (233)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999998776544 99999999999999999999 9999999999999999999999999999998
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHhc
Q 026616 174 VGKVAHMIYGLMGAIIFSGYIVYDTNNLIKR-YTYDEYITAAIELYLDIVNIFIAFLQMLG 233 (236)
Q Consensus 174 ~~~~~~~i~~~~g~~lf~~~i~~Dtq~i~~~-~~~~dyv~~Al~LylDiinLF~~iL~il~ 233 (236)
++.+++++|++|+++|+++++||||+|+|+ .++|+++.+|++||+|++|+|+++||+++
T Consensus 168 -s~~l~~~IS~lgvlifsgli~yDtq~I~~~~~~~~~~i~~AlsLYldfiNlF~~LL~i~g 227 (233)
T COG0670 168 -SSALHLAISVLGVLIFSGLIAYDTQNIKRMEGGERLAIMGALSLYLDFINLFLSLLRILG 227 (233)
T ss_pred -CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457899999999999999999999999985 67899999999999999999999999998
No 5
>PF01027 Bax1-I: Inhibitor of apoptosis-promoting Bax1; InterPro: IPR006214 Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak) []. Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress []. BI-1 appears to exert its effect through an interaction with calmodulin [].
Probab=100.00 E-value=8.6e-34 Score=237.68 Aligned_cols=197 Identities=39% Similarity=0.694 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHH-H--HHhhhccCCcHH--HHHHHHH
Q 026616 26 AFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLI-C--PLFAYRKRHPWN--FVLLVLF 100 (236)
Q Consensus 26 ~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~--~l~~~~~~~p~~--~~~l~~f 100 (236)
+|++|||++++.|+.+|+++++.....| .+...+++ ..++..+++++.. + ....++|++|.| +..+..|
T Consensus 2 ~fl~kvy~~l~~~l~it~~~~~~~~~~~---~~~~~~~~---~~~~~~i~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 75 (205)
T PF01027_consen 2 QFLRKVYGLLALQLAITALGAFLVLASP---LFLSQHFP---LSWVSLIVSLVLLIFLYILFNRRRRFPSNVALILLFIF 75 (205)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 7999999999999999988888887665 34444555 4455555555544 2 222234455555 8999999
Q ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Q 026616 101 TILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHM 180 (236)
Q Consensus 101 t~~~g~~l~~~~~~~~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~~~~~~~~ 180 (236)
|..+|..++++...++++++.+|+..|+++|++++++++ ++|+|++++++.++.++.+++++++.++|++ ++..+.
T Consensus 76 t~~~g~~~~~i~~~~~~~~v~~a~~~T~~if~~l~~~a~---~~~~d~~~~~~~l~~~l~~l~i~~l~~~f~~-~~~~~~ 151 (205)
T PF01027_consen 76 TLLEGLLLGPISSFYDPSIVLQAFLLTAAIFIALTLYAF---FTKRDFTRWGGILFIGLIGLIIFGLVSIFLP-SSPLYL 151 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhhcccchHHHHHHHHHHHHHHHHHHhc-chHHHH
Confidence 999999999999999999999999999999999999999 8999999999999999999999999999887 556788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-cCCccHH-HHHHHHHHHHHHHHHHHHHHHh
Q 026616 181 IYGLMGAIIFSGYIVYDTNNLIK-RYTYDEY-ITAAIELYLDIVNIFIAFLQML 232 (236)
Q Consensus 181 i~~~~g~~lf~~~i~~Dtq~i~~-~~~~~dy-v~~Al~LylDiinLF~~iL~il 232 (236)
+++++|+++|+++++||||+++| +.++||+ +.+|+++|+|++|+|+++||++
T Consensus 152 ~is~~~~~lf~~~l~~Dt~~i~~~~~~~~~~~i~~Al~Ly~d~i~lF~~iL~ll 205 (205)
T PF01027_consen 152 LISYIGILLFSLYLVYDTQRIIRRYFSPDDYAIIAALSLYLDIINLFLRILRLL 205 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 88999999999999999999987 4567887 9999999999999999999986
No 6
>KOG1629 consensus Bax-mediated apoptosis inhibitor TEGT/BI-1 [Defense mechanisms]
Probab=100.00 E-value=3.4e-32 Score=220.86 Aligned_cols=200 Identities=24% Similarity=0.389 Sum_probs=174.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHH
Q 026616 18 IEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLL 97 (236)
Q Consensus 18 ~~~~~~r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~~~~~p~~~~~l 97 (236)
.-+|.+| +|++|||..++..+..++.++++.+.++ ..| .++.+++++++.++.+.+.++..++.++
T Consensus 18 ~~sP~vq-~HLkkvY~tl~~~~~asA~GAylhM~~n---------igG----~lsalg~l~~miwl~~~py~hk~rl~lL 83 (235)
T KOG1629|consen 18 HISPAVQ-NHLKKVYLTLALALFASAAGAYLHMVWN---------IGG----LLSALGSLGLMIWLMFTPYEHKTRLGLL 83 (235)
T ss_pred cCCHHHH-HHHHHHHHHHHHHHHHHHhhhHHHhhhh---------ccc----hHHHHHHHHHHHHHhCCCCccchhHHHH
Confidence 3467888 7999999999999999999998765432 111 2466778888888888777777789999
Q ss_pred HHHHHHHHHHHHHHHHh---cchhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhcc
Q 026616 98 VLFTILLSFTLGVACAF---SKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRV 174 (236)
Q Consensus 98 ~~ft~~~g~~l~~~~~~---~~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~~ 174 (236)
++|+++.|..+||.+.+ .||+++.+|+.+|+++|.|+|+.|.+|+ +|++.++|+.+.+++..+.+.++.|.+|+
T Consensus 84 ~~fa~l~GasvGP~i~~~ididpsIliTAf~GTav~F~cfSasAmlAr--rreYLylGg~L~s~~s~l~wl~l~n~~fg- 160 (235)
T KOG1629|consen 84 FLFAFLTGASVGPLIKFCIDIDPSILITAFVGTAVIFVCFSASAMLAR--RREYLYLGGLLSSGLSLLLWLSLANSFFG- 160 (235)
T ss_pred HHHHHHcCCcccchhhheeccChHHHHHHHHhhHHHHHHHHHHHHHHh--hhhhhhhhHHHHHHHHHHHHHHHHHHHhh-
Confidence 99999999999998754 6899999999999999999999999764 46899999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 026616 175 GKVAHMIYGLMGAIIFSGYIVYDTNNLIKRY--TYDEYITAAIELYLDIVNIFIAFLQMLGA 234 (236)
Q Consensus 175 ~~~~~~i~~~~g~~lf~~~i~~Dtq~i~~~~--~~~dyv~~Al~LylDiinLF~~iL~il~~ 234 (236)
|.+....-.++|+++|++|+++|||.|+|+. ++.||++||+.+|.|++..|.+||.|+-+
T Consensus 161 S~~v~~~qLY~Gllvfvg~ivvdTQ~IiEKah~GdmDyv~Hsl~lf~dfvsvF~riLiIl~~ 222 (235)
T KOG1629|consen 161 SIWVFKFQLYVGLLVFVGFIVVDTQEIIEKAHHGDMDYVQHSLDLFTDFVSVFRRILIILAM 222 (235)
T ss_pred HHHHHHHHHHHHHHHhheeEEeeHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6666677788999999999999999999875 57899999999999999999999999853
No 7
>KOG1630 consensus Growth hormone-induced protein and related proteins [Signal transduction mechanisms]
Probab=99.79 E-value=2.2e-18 Score=145.42 Aligned_cols=208 Identities=25% Similarity=0.297 Sum_probs=162.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhhh------ccCC
Q 026616 17 MIEPPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAY------RKRH 90 (236)
Q Consensus 17 ~~~~~~~r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~------~~~~ 90 (236)
.++.+.+| +-+..+|.+++..+..|+..+.....++.+-+++.+..| ++.++++..+...-.. .+..
T Consensus 105 ~iWPqyVr-dRI~sTYay~~gS~~lTA~savA~~rs~~lm~l~~rgg~------va~~~tla~mi~sG~larsi~Yq~g~ 177 (336)
T KOG1630|consen 105 VIWPQYVR-DRIHSTYAYLAGSCGLTAASAVAISRSPALMNLMMRGGW------VAIGVTLAAMIGSGMLARSIEYQPGP 177 (336)
T ss_pred cccHHHHH-HHHHHHHHHHhccHHHHHHHHHHHhccHHHHHHHhcCch------HHHHHHHHHHHhcchhhhcccCCCCc
Confidence 35667788 689999999999999999988777777777777666544 4455555554432111 1122
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHH
Q 026616 91 PWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMF 170 (236)
Q Consensus 91 p~~~~~l~~ft~~~g~~l~~~~~~~~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~ 170 (236)
..+.....+-+...|-+++|++..-+| ++..|...|++|+..++..+..|+.. .|..+++.+-+++-++++.++.++
T Consensus 178 gaKhLAW~lHc~vlGAV~APlc~lgGP-iLtrAa~YTaGIVGgLStvA~cAPSe--KFL~MggPLaiGlGvVFvssl~sm 254 (336)
T KOG1630|consen 178 GAKHLAWLLHCGVLGAVVAPLCFLGGP-ILTRAAWYTAGIVGGLSTVAACAPSE--KFLNMGGPLAIGLGVVFVSSLGSM 254 (336)
T ss_pred cHHHHHHHHHHHHHHHHHhhHHhcccH-HHHHHHHHHccccchhhhhhhcCcHH--HHhhcCCCceeeeeeEehhhhhhh
Confidence 345566778889999999999976665 67799999999999999888855544 478999999999999999999999
Q ss_pred HhcchH----HHHHHHHHHHHHHHHHHHHHHHHHHhhcC------C--c-cHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 026616 171 FFRVGK----VAHMIYGLMGAIIFSGYIVYDTNNLIKRY------T--Y-DEYITAAIELYLDIVNIFIAFLQMLGA 234 (236)
Q Consensus 171 f~~~~~----~~~~i~~~~g~~lf~~~i~~Dtq~i~~~~------~--~-~dyv~~Al~LylDiinLF~~iL~il~~ 234 (236)
|.|... -+..+..+.|+++|++|++||||++.++. + | -|++-+++++|+|..|+|+||..|++.
T Consensus 255 ~LPPtta~GA~LaSmslYGGLiLFS~FLLYDTQr~vk~ae~ypq~s~~~~~dPin~~msiymdvlnifiriv~il~g 331 (336)
T KOG1630|consen 255 FLPPTTALGAGLASMSLYGGLILFSGFLLYDTQRVVKSAEKYPQYSEFPNYDPINACMSIYMDVLNIFIRIVMILGG 331 (336)
T ss_pred hcCCchhhhhhhHHHHHhccHHHHHHHHHHhHHHHHHHHHhCcchhccCCCCchHHHHHHHHHHHHHHHHHHhhhcC
Confidence 987432 22345667899999999999999999632 1 2 589999999999999999999999974
No 8
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=99.68 E-value=3.2e-14 Score=123.53 Aligned_cols=200 Identities=18% Similarity=0.147 Sum_probs=143.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhhhccC-CcHHHHHHH
Q 026616 20 PPEIRWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKR-HPWNFVLLV 98 (236)
Q Consensus 20 ~~~~r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~~~~-~p~~~~~l~ 98 (236)
++....+-+.|+-.++.. +..++..+|......+ +. ..+ ...+..++.+++.+..+++|+. +|. +-.
T Consensus 51 ~~MT~~~vv~KT~~ll~l-l~~~a~~~~~~~~~~~--~~--~~~----~~~~g~i~glvl~lv~~F~~~~~sp~---l~~ 118 (274)
T PF12811_consen 51 RRMTVDGVVNKTGILLGL-LVVTAAVSWFLIPSNP--GL--AMP----LAIVGAIGGLVLALVISFKRKVWSPA---LAP 118 (274)
T ss_pred CCcccccHHHHHHHHHHH-HHHHHHHHHHHHhcch--HH--HHH----HHHHHHHHHHHHHHHHHhCCccCChH---HHH
Confidence 444666788888766654 3455555554322110 10 011 3345566667666666665544 563 346
Q ss_pred HHHHHHHHHHHHHHHhcc-------hhHHHHHHHHHHHHHHHHHH-HHHhhcccCccccchHHHHHHHHHHHHHHHHHHH
Q 026616 99 LFTILLSFTLGVACAFSK-------GKIILEAFILTGAAVAGLTL-YTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMF 170 (236)
Q Consensus 99 ~ft~~~g~~l~~~~~~~~-------~~iv~~A~~~T~~if~~ls~-~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~ 170 (236)
.|++++|+.+|.+...++ |+++.+|.++|.++|+++.+ |.. ..-|.-.++.+.+..+..+..++.++|+
T Consensus 119 ~YA~~EG~flG~iS~~f~~~~~~~~pGIv~qAvl~T~~vf~~ml~lYk~---g~IrvT~kf~~iv~~a~~gi~~~~Lv~~ 195 (274)
T PF12811_consen 119 IYAVLEGVFLGGISAVFENIYYSRYPGIVFQAVLGTFGVFAVMLALYKT---GIIRVTPKFRRIVMIATFGIALFYLVNL 195 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHh---CCeeechHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999998876543 89999999999999998875 322 3335667899999988888888888876
Q ss_pred Hhc-------chHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C-CccHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 026616 171 FFR-------VGKVAHMIYGLMGAIIFSGYIVYDTNNLIKR---Y-TYDEYITAAIELYLDIVNIFIAFLQMLGA 234 (236)
Q Consensus 171 f~~-------~~~~~~~i~~~~g~~lf~~~i~~Dtq~i~~~---~-~~~dyv~~Al~LylDiinLF~~iL~il~~ 234 (236)
... .+..+.+.++.+++.+-+..++.|++.|.+. . .++..|.+|++|-+++++||++|||+|++
T Consensus 196 vl~lf~~~l~~~gplgI~~slv~v~iAa~sLllDFd~Ie~~v~~gaPk~~eW~~AfGL~vTLVWLYlEILRLL~~ 270 (274)
T PF12811_consen 196 VLSLFVGSLRDGGPLGIGFSLVVVGIAALSLLLDFDFIEQGVRQGAPKKMEWYAAFGLLVTLVWLYLEILRLLSK 270 (274)
T ss_pred HHHHHHhhcccCChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432 1245678889999999999999999999763 2 34567999999999999999999999974
No 9
>COG4760 Predicted membrane protein [Function unknown]
Probab=98.85 E-value=6.9e-07 Score=74.23 Aligned_cols=192 Identities=21% Similarity=0.310 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhh-hccCCcHHHHHHHHHHHHH
Q 026616 26 AFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFA-YRKRHPWNFVLLVLFTILL 104 (236)
Q Consensus 26 ~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~-~~~~~p~~~~~l~~ft~~~ 104 (236)
..+.|+=..++. ++.+++++|....+.+ ....| ...+..++.+++.....+ +++.+|. .-..|++.+
T Consensus 53 dvvtkTG~tLav-~~vtavvs~~~~lv~p----~La~~----ltlvGaiGGlilvLvatFgkK~~spa---i~l~YAv~E 120 (276)
T COG4760 53 DVVTKTGATLAV-LLVTAVVSFFLVLVNP----ALAMP----LTLVGAIGGLILVLVATFGKKQWSPA---IVLSYAVLE 120 (276)
T ss_pred chhhhhhHHHHH-HHHHHHHHHHHHhcCH----Hhccc----HhHHHHhhhHHHHHHHHhccccCChH---HHHHHHHHH
Confidence 455666555555 4556666664432221 11222 344556666665555444 4556663 566799999
Q ss_pred HHHHHHHHHh------cc---hhHHHHHHHHHHHHHHHHHHHHHhhcccC--ccccchHHHHHHHHHHHHHHHHHH----
Q 026616 105 SFTLGVACAF------SK---GKIILEAFILTGAAVAGLTLYTFWAVKRG--KDFSFLGPFLSASLLVLIVFGIFM---- 169 (236)
Q Consensus 105 g~~l~~~~~~------~~---~~iv~~A~~~T~~if~~ls~~a~~a~~tk--~d~~~~~~~l~~~l~~l~v~~l~~---- 169 (236)
|+.+|.+... ++ ..+|.+|.++|.++|.+|..- + +|. |...+....+..+..++.+..+.|
T Consensus 121 GlFlGaiS~lla~ftV~~anaGgligqAvLgT~Gvf~gML~v-Y---ktGaIkvTpkF~r~v~a~~~Gvl~L~Lgn~vla 196 (276)
T COG4760 121 GLFLGAISFLLANFTVYEANAGGLIGQAVLGTFGVFFGMLVV-Y---KTGAIKVTPKFTRMVVAATFGVLVLMLGNFVLA 196 (276)
T ss_pred HHHHHHHHHHhccceEEeccccceeHHHHHHHHHHHHHHHHH-H---hcCceeecchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987632 22 478999999999999998752 3 332 333445555555554444443333
Q ss_pred HHhc-------chHHHHHHHHH--HHHHHHHHHHHHHH-HHHhhcCC-ccHHHHHHHHHHHHHHHHHHHHHHHhc
Q 026616 170 FFFR-------VGKVAHMIYGL--MGAIIFSGYIVYDT-NNLIKRYT-YDEYITAAIELYLDIVNIFIAFLQMLG 233 (236)
Q Consensus 170 ~f~~-------~~~~~~~i~~~--~g~~lf~~~i~~Dt-q~i~~~~~-~~dyv~~Al~LylDiinLF~~iL~il~ 233 (236)
+|.+ .+..+.+++|. +|+.-|+..+-+|. ++++|+.. ++-.+..|+.|-...+++|+++||+++
T Consensus 197 ~F~Gg~~pllr~gG~~~IiFSLfcigiAAf~fllDFDaad~~vr~GAP~kmaWgvAlGL~VTLVWLY~EiLRLLS 271 (276)
T COG4760 197 MFVGGGIPLLRSGGPFGIIFSLFCIGIAAFSFLLDFDAADQMVRAGAPEKMAWGVALGLTVTLVWLYLEILRLLS 271 (276)
T ss_pred HHhcCCcccccCCCceEeeHHHHHHHHHHHHHHhhhhHHHHHHHcCChhhhHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 3321 11222344443 45555665555554 22333333 457899999999999999999999997
No 10
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=89.74 E-value=8.5 Score=30.28 Aligned_cols=87 Identities=15% Similarity=0.153 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHhhhccCCcHHHHHHHHHHHH
Q 026616 24 RWAFIRKVYAIVAMQILLTIAVASVVVFVKPIHKFLASGTPGLVLLIVVFILTLLLICPLFAYRKRHPWNFVLLVLFTIL 103 (236)
Q Consensus 24 r~~fl~kvy~~l~~~l~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~l~~~~~~~p~~~~~l~~ft~~ 103 (236)
|+++..++..+++.-++..++..++..+++.+.+..+- .+....++++.+...... ++++++..-.++.+-+++
T Consensus 28 ~~~~~~~~l~~lGall~~~gii~fvA~nW~~i~~~~k~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~l 101 (145)
T PF09925_consen 28 RSSWLARILLYLGALLLGLGIILFVAANWDDIPRLAKL-----GLLLALLLLSYVGGFWLW-RRRSPRLAEALLLLGAVL 101 (145)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH-----HHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHH
Confidence 33478899999998888888888887777655443221 122222222222222211 233444555667777777
Q ss_pred HHHHHHHHHHhcc
Q 026616 104 LSFTLGVACAFSK 116 (236)
Q Consensus 104 ~g~~l~~~~~~~~ 116 (236)
.|-.++.+-..|+
T Consensus 102 ~ga~ialigQ~y~ 114 (145)
T PF09925_consen 102 FGALIALIGQIYQ 114 (145)
T ss_pred HHHHHHHHHhHhc
Confidence 7777777766554
No 11
>KOG3488 consensus Dolichol phosphate-mannose regulatory protein (DPM2) [Posttranslational modification, protein turnover, chaperones]
Probab=66.33 E-value=42 Score=23.40 Aligned_cols=54 Identities=24% Similarity=0.432 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHH-------HHHHHHhhcC-CccHH----HHHHHHHHHHHHHHHHHHHHHhc
Q 026616 180 MIYGLMGAIIFSGYIV-------YDTNNLIKRY-TYDEY----ITAAIELYLDIVNIFIAFLQMLG 233 (236)
Q Consensus 180 ~i~~~~g~~lf~~~i~-------~Dtq~i~~~~-~~~dy----v~~Al~LylDiinLF~~iL~il~ 233 (236)
..+.+++..+|.-|.+ .|.|.++|++ -|+|| ..+|.-.-+.++..|+.++.+=+
T Consensus 10 l~lv~iSl~iFtYYT~WViilPFvDs~hiihKyFLpr~yAi~iPvaagl~ll~lig~Fis~vMlKs 75 (81)
T KOG3488|consen 10 LMLVYISLAIFTYYTIWVIILPFVDSMHIIHKYFLPREYAITIPVAAGLFLLCLIGTFISLVMLKS 75 (81)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHhcChhHHhhhHHHHHHHHHHHHHHHHHHHhhhc
Confidence 3444555555655554 4888888875 47776 34555556789999999887654
No 12
>PRK10245 adrA diguanylate cyclase AdrA; Provisional
Probab=30.92 E-value=4e+02 Score=24.07 Aligned_cols=24 Identities=17% Similarity=0.081 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 026616 26 AFIRKVYAIVAMQILLTIAVASVV 49 (236)
Q Consensus 26 ~fl~kvy~~l~~~l~~t~~~~~~~ 49 (236)
+|.||+|..=..|+...+......
T Consensus 31 ~~~~r~~~~r~~g~~~~~~~~~~~ 54 (366)
T PRK10245 31 RFARRVRLPRAVGLAGMFLPIAST 54 (366)
T ss_pred hhHHHHHHHHHHHHHHhHHHHHHH
Confidence 599999998888777666544433
No 13
>COG2917 Intracellular septation protein A [Cell division and chromosome partitioning]
Probab=26.71 E-value=3.7e+02 Score=22.21 Aligned_cols=17 Identities=24% Similarity=0.258 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 026616 210 YITAAIELYLDIVNIFI 226 (236)
Q Consensus 210 yv~~Al~LylDiinLF~ 226 (236)
+.++..-+++-++|+++
T Consensus 121 ~~W~~FFlf~ai~N~yV 137 (180)
T COG2917 121 LRWALFFLFCAIANEYV 137 (180)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 45566666666666665
No 14
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=24.06 E-value=4.9e+02 Score=22.74 Aligned_cols=14 Identities=14% Similarity=0.524 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHH
Q 026616 98 VLFTILLSFTLGVA 111 (236)
Q Consensus 98 ~~ft~~~g~~l~~~ 111 (236)
.+.+++.|++++..
T Consensus 87 ~~lAvliaivIs~p 100 (301)
T PF14362_consen 87 LLLAVLIAIVISEP 100 (301)
T ss_pred HHHHHHHHHHHHHH
Confidence 44667777777654
No 15
>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=22.53 E-value=5.1e+02 Score=22.46 Aligned_cols=61 Identities=18% Similarity=0.216 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Q 026616 119 IILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPFLSASLLVLIVFGIFMFFFRVGKVAHMIYG 183 (236)
Q Consensus 119 iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~l~~~l~~l~v~~l~~~f~~~~~~~~~i~~ 183 (236)
+...+..+|..++..+.+-+ ++.-.+....+++--++.=+.+.+.++++++.......+++
T Consensus 144 Iygi~~~gsl~iy~L~nlm~----~~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~vg~il~ 204 (249)
T KOG3103|consen 144 IYGISLLGSLSIYFLLNLMS----NKNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTVGYILS 204 (249)
T ss_pred EeeeHHHHHHHHHHHHHHHh----hcCcceeeehHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 44456666777777776643 23335667778887788888899999998865443334433
No 16
>PF14256 YwiC: YwiC-like protein
Probab=20.80 E-value=4e+02 Score=20.52 Aligned_cols=59 Identities=15% Similarity=0.295 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHhhcccCccccchHHH
Q 026616 90 HPWNFVLLVLFTILLSFTLGVACAFSKGKIILEAFILTGAAVAGLTLYTFWAVKRGKDFSFLGPF 154 (236)
Q Consensus 90 ~p~~~~~l~~ft~~~g~~l~~~~~~~~~~iv~~A~~~T~~if~~ls~~a~~a~~tk~d~~~~~~~ 154 (236)
.+.......+|.... ...+......+|.++.-+. -...+++..++.- ++|||-+-...+
T Consensus 55 ~~~~~~~~~~Yg~~a-~~~~l~~l~~~p~ll~~~~--~~~pl~~v~~~~~---~~~~eRsLlndl 113 (129)
T PF14256_consen 55 RPRYLKWALIYGAIA-LVFGLPALLYAPRLLWWAL--LFLPLFAVNLYFA---KRKRERSLLNDL 113 (129)
T ss_pred chhHHHHHHHHHHHH-HHHHHHHHHHhHHHHHHHH--HHHHHHHHHHHHH---HhcCchhHHHhH
Confidence 555555677775443 3334444457888887776 4444555555433 555555544444
No 17
>PF10777 YlaC: Inner membrane protein YlaC; InterPro: IPR019713 The extracytoplasmic function (ECF) sigma factors are small regulatory proteins that are quite divergent in sequence relative to most other sigma factors. YlaC, regulated by YlaA, is important in oxidative stress resistance. It contributes to hydrogen peroxide resistance in Bacillus subtilis [].
Probab=20.50 E-value=4.6e+02 Score=21.09 Aligned_cols=8 Identities=13% Similarity=0.243 Sum_probs=3.7
Q ss_pred HHHhcCch
Q 026616 57 KFLASGTP 64 (236)
Q Consensus 57 ~~~~~~~~ 64 (236)
+|+.+||+
T Consensus 30 ~Fi~~HP~ 37 (155)
T PF10777_consen 30 SFIRNHPY 37 (155)
T ss_pred HHHHhCcH
Confidence 34444554
Done!