BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026621
(236 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana
GN=UBP12 PE=1 SV=2
Length = 1116
Score = 87.8 bits (216), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
Query: 104 KHVWKIENFSKLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALADLSTITR 163
K W I NFS+ + + S+VFV G KW+I ++PKG V H+S+YL ++D +++
Sbjct: 56 KFTWTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSDAASLPY 112
Query: 164 DSKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSE-DWGWSTFVELSYFNKAENGFLMNDV 222
Y F+L + +Q+ +++ +K + + E DWG+++F+ LS G+L+ND
Sbjct: 113 GWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDT 172
Query: 223 CIVEAEV 229
+VEAEV
Sbjct: 173 VLVEAEV 179
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 3 DTSSLGLGWEVYVIFRLFVLDQNKDEFLILQDAMGKERRFHVLKLEWGFDQFIPLEEFND 62
D +SL GW Y F L V++Q + + ++ + +F+ + +WGF F+PL E D
Sbjct: 106 DAASLPYGWSRYAQFSLAVVNQIHTRYTVRKET---QHQFNARESDWGFTSFMPLSELYD 162
Query: 63 ASNGYLVGDTCVFGAEVLVKE 83
S GYLV DT + AEV V++
Sbjct: 163 PSRGYLVNDTVLVEAEVAVRK 183
>sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana
GN=UBP13 PE=1 SV=1
Length = 1115
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
Query: 99 SASNYKHVWKIENFSKLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALADL 158
+ K W I F++L + + S+VFV G KW+I ++PKG V H+S+YL +AD
Sbjct: 50 DPPSLKFTWTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVADA 106
Query: 159 STITRDSKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSE-DWGWSTFVELSYFNKAENGF 217
+ + Y F+L + +QV ++++ +K + + E DWG+++F+ LS + G+
Sbjct: 107 ANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGY 166
Query: 218 LMNDVCIVEAEV 229
L+ND ++EAEV
Sbjct: 167 LVNDTVLIEAEV 178
Score = 57.4 bits (137), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 1 MVDTSSLGLGWEVYVIFRLFVLDQNKDEFLILQDAMGKERRFHVLKLEWGFDQFIPLEEF 60
+ D ++L GW Y F L V++Q + + I ++ + +F+ + +WGF F+PL E
Sbjct: 103 VADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKET---QHQFNARESDWGFTSFMPLSEL 159
Query: 61 NDASNGYLVGDTCVFGAEVLVKE 83
+ + GYLV DT + AEV V++
Sbjct: 160 YEPTRGYLVNDTVLIEAEVAVRK 182
>sp|Q8RY18|Y5436_ARATH MATH domain-containing protein At5g43560 OS=Arabidopsis thaliana
GN=At5g43560 PE=1 SV=1
Length = 1055
Score = 67.4 bits (163), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 10/129 (7%)
Query: 104 KHVWKIENFSKLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALADLSTITR 163
K+ W IE FS + + +VF G KW I +YP+G V +H+S++L +A +
Sbjct: 70 KNTWTIEKFSDINKRELRGDVFEVGGYKWYILIYPQGCDV--CNHLSLFLCVAHHEKLLP 127
Query: 164 DSKIYVHFTLRI--RDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFNKAENGFLMND 221
+ FT+ + +D SKH++ W DWGW F+EL K + GF+ +
Sbjct: 128 GWSHFAQFTIAVSNKDPKKSKHSDTLHRFW--KKEHDWGWKKFIELP---KLKEGFIDDS 182
Query: 222 VCI-VEAEV 229
C+ ++A+V
Sbjct: 183 GCLTIKAQV 191
>sp|Q8T126|FNKC_DICDI Probable inactive serine/threonine-protein kinase fnkC
OS=Dictyostelium discoideum GN=fnkC PE=3 SV=1
Length = 1304
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 27/198 (13%)
Query: 42 FHVLKLEWGFDQFIPLEEFNDASNGYLVGDTCVFGAEVLVKERNKCKGECLFLA---KLT 98
F + + G+ FI L + +NG+LV +T +K R + K
Sbjct: 1117 FSIKEFNHGYGSFIGLFSLLNPNNGFLVNNT--------IKVRIDAAPTSPLVNTYDKYN 1168
Query: 99 SASNYKHVWKIENFSKLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALADL 158
N + + SK +++ + S +F++ +KW IK+YP GQ +++SV+L D
Sbjct: 1169 IGLNQAFSYSVPMMSK-KSEPFISPIFMSCGRKWIIKIYPMGQP--SSNYMSVFLEYRD- 1224
Query: 159 STITRDSKIYVHFTLRIRDQVLSKHNEKKASTWL----STSSEDWGWSTFVELSYFNKAE 214
+ + VHF+L + Q+ + E+ W+ ++ S +G+ F+ +S +
Sbjct: 1225 -----EGEENVHFSLELISQL---YPEQSIKYWVQYRFNSKSNSFGYPKFIGVSTLMDPD 1276
Query: 215 NGFLMNDVCIVEAEVLRI 232
GFL+ND I+ +L++
Sbjct: 1277 MGFLVNDTIILNVSILQL 1294
Score = 42.0 bits (97), Expect = 0.004, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 109 IENFSKLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALADL----STITRD 164
I NFS + + Y S +F W+ K Y G+ +S++++ DL TI +
Sbjct: 1032 INNFSNRKDQFY-SPIFSLIGSNWRCKFYSNGKDASTSGKLSIFISNCDLLNNPFTIFLE 1090
Query: 165 SKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFNKAENGFLMND 221
I TL I + ++ +K +S S + G+ +F+ L NGFL+N+
Sbjct: 1091 KSISYKLTL-INQKNPNESIQKSSSHTFSIKEFNHGYGSFIGLFSLLNPNNGFLVNN 1146
>sp|Q86AY4|Y2340_DICDI TNF receptor-associated factor family protein DDB_G0272340
OS=Dictyostelium discoideum GN=DDB_G0272340 PE=3 SV=2
Length = 449
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 15/127 (11%)
Query: 102 NYKHVWKIENFSK-----LEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSH--ISVYLA 154
NY++ W I N+S+ + K ES F+ GN K+KI+ YP G G+ S +S+YL
Sbjct: 311 NYQNKWVITNWSQKLQDYPKPKSIESPEFMVGNLKFKIQFYPNG-GLSDESKDFLSIYLY 369
Query: 155 LADLSTITRDSKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFNKAE 214
D T ++ V F+ + ++ ++ N K AST + + WGW +F+ S +
Sbjct: 370 KFDDQTPSK-----VQFSFELLNKDFTR-NRKLASTNIFHTENKWGWRSFINNSLVT-TQ 422
Query: 215 NGFLMND 221
GF++ +
Sbjct: 423 TGFVIQN 429
>sp|Q54FG0|Y0883_DICDI TNF receptor-associated factor family protein DDB_G0290883
OS=Dictyostelium discoideum GN=DDB_G0290883 PE=3 SV=1
Length = 460
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 100 ASNYKHVWKIENFS-----KLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLA 154
++ Y++ W I N+S KL K S + + + +++ +YPKG +IS+YL
Sbjct: 318 SNGYRNKWIISNYSSLAKSKLNCKSLSSPILLILSHHFQVCVYPKGDE--NKEYISLYLR 375
Query: 155 LADLSTITRDSKIYVHFTL-RIRDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFNKA 213
+ ++ K+ FTL + D+ SK K+ + S ++WGW F+ NK
Sbjct: 376 VNNIEE-PNSLKVEYSFTLVNVLDK--SKSITKRVDKIVFISPKEWGWGKFLLSDLINK- 431
Query: 214 ENGFLMND 221
ENG+L ND
Sbjct: 432 ENGWLSND 439
>sp|P11467|DG17_DICDI RING finger protein DG17 OS=Dictyostelium discoideum GN=zfaA PE=2
SV=2
Length = 460
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 100 ASNYKHVWKIENFS-----KLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLA 154
++ Y++ W I N+S KL + S + + +++ +YPKG +IS+YL
Sbjct: 318 SNGYRNKWIISNYSSVAKSKLNCQALSSPMLSILSHLFQVCVYPKGDE--NKEYISLYLR 375
Query: 155 LADLSTITRDSKIYVHFTL-RIRDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFNKA 213
+ ++ K+ FTL + D+ SK KK + SSE WGW F+ NK
Sbjct: 376 VNNIEE-PNSLKVEYSFTLVNVLDK--SKSITKKEDKKVFISSEGWGWGKFLLSDLINK- 431
Query: 214 ENGFLMND 221
ENG+L ND
Sbjct: 432 ENGWLSND 439
>sp|Q54C11|Y3202_DICDI TNF receptor-associated factor family protein DDB_G0293202
OS=Dictyostelium discoideum GN=DDB_G0293202 PE=2 SV=1
Length = 437
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 97 LTSASNYKHVWKIENFSKLEAK---LYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYL 153
++ +K VW I+NFSK + + + S V G+ + + LYP G+ S +S+YL
Sbjct: 298 ISKQEKFKSVWDIKNFSKRQFQKGFYFSSPVITVGHHSFHLWLYPNGETSPSNS-LSLYL 356
Query: 154 ALADLSTITRDSKIYVHFTLRIRDQVLSKHNEK-KASTWLSTSSEDWGWS 202
L T+ K +V+F++ I++ + N + L WGW+
Sbjct: 357 VL------TKGEKTFVNFSISIKNHNGNDLNSTFENDKCLEVGGTRWGWA 400
>sp|Q86KX6|Y2348_DICDI TNF receptor-associated factor family protein DDB_G0272348
OS=Dictyostelium discoideum GN=DDB_G0272348 PE=3 SV=2
Length = 595
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 103 YKHVWKIENFSKLE----AKLY-ESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALAD 157
YK+ W I N+S+ E +K Y +S +F GN + +K +P G+ I +Y D
Sbjct: 457 YKNKWVISNYSEQEQQGISKDYIKSPLFKIGNSTFFLKWFPFGKKKLNYCSIFLYKTQDD 516
Query: 158 LSTITRDSKIYVHF-TLRIRDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFNKAENG 216
S I Y+H +I D+V K +K + S +G S F++ + NG
Sbjct: 517 KSIIVN---YYIHLVNNQISDEVYEKRGCQKYDS--ENGSAGYGSSQFIKRADLLNDANG 571
Query: 217 FLMNDVCIVEAEVLRISKAL 236
FL+ND +E E+ + L
Sbjct: 572 FLINDSITIEIEIFATEEIL 591
>sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2
Length = 1129
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 37/162 (22%)
Query: 95 AKLTSASNYKHVWKIENFSKLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYL- 153
L A++ + W ++NFS LE K Y S +F AG+ W+I L+PK G + + SV+L
Sbjct: 44 PDLEEAAHASYSWVVKNFSTLEDKTY-SPLFKAGHTTWRIVLFPK--GCNQTEYASVFLE 100
Query: 154 ---------------ALADLSTITRDSKIY--------VHFTL---RIRDQVLSKHNEKK 187
LA T T D +I F L ++D + + N
Sbjct: 101 YLPQCKVEAIRKYEAELAAGKTPTIDPEIVNDETYSCCAQFALSLSNVQDPTVMQIN--T 158
Query: 188 ASTWLSTSSEDWGWSTFVELSYFNKAEN----GFLMND-VCI 224
+ + +DWG++ FV+L FL ND +CI
Sbjct: 159 SHHRFRSEVKDWGFTRFVDLRKIAVPTPEFPVPFLENDEICI 200
>sp|O94972|TRI37_HUMAN E3 ubiquitin-protein ligase TRIM37 OS=Homo sapiens GN=TRIM37 PE=1
SV=2
Length = 964
Score = 42.4 bits (98), Expect = 0.003, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 109 IENFSKLEAK---LYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALADLSTITRDS 165
+ENFS L + +Y + V+G W++K+YP G GV RG ++SV+L L+ + + S
Sbjct: 283 LENFSTLRQRADPVYSPPLQVSG-LCWRLKVYPDGNGVVRGYYLSVFLELS--AGLPETS 339
Query: 166 KIYVHFTLRIRDQVLSKHNEKKASTWLSTSS-----EDWGWSTFVELSYFNKAENGFL-- 218
K + R+ + V N+ + +S E WG++ F L A G+L
Sbjct: 340 K----YEYRV-EMVHQSCNDPTKNIIREFASDFEVGECWGYNRFFRLDLL--ANEGYLNP 392
Query: 219 MNDVCIVEAEV 229
ND I+ +V
Sbjct: 393 QNDTVILRFQV 403
>sp|Q6PCX9|TRI37_MOUSE E3 ubiquitin-protein ligase TRIM37 OS=Mus musculus GN=Trim37 PE=2
SV=1
Length = 961
Score = 42.4 bits (98), Expect = 0.003, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 20/131 (15%)
Query: 109 IENFSKLEAK---LYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALADLSTITRDS 165
+ENFS L + +Y + V+G W++K+YP G GV RG ++SV+L L+ + + S
Sbjct: 283 LENFSTLRQRADPVYSPPLQVSG-LCWRLKVYPDGNGVVRGYYLSVFLELS--AGLPETS 339
Query: 166 KIYVHFTLRIRDQVLSKHNEKKASTWLSTSS-----EDWGWSTFVELSYFNKAENGFL-- 218
K + R+ + V N+ + +S E WG++ F L A G+L
Sbjct: 340 K----YEYRV-EMVHQSCNDPTKNIIREFASDFEVGECWGYNRFFRLDLL--ANEGYLNR 392
Query: 219 MNDVCIVEAEV 229
ND I+ +V
Sbjct: 393 QNDTVILRFQV 403
>sp|P34568|BAT43_CAEEL BTB and MATH domain-containing protein 43 OS=Caenorhabditis elegans
GN=bath-43 PE=3 SV=2
Length = 451
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 17/144 (11%)
Query: 103 YKHVWKIENFSKLEAKLYE---SEVFVAGNQ---KWKIKLYPKGQGVGRGSHISVYLALA 156
+ ++W I NFS ++ E S F AG KW +++ PKG ++S+YL L
Sbjct: 96 FNYMWTINNFSFCREEMGEVLKSSTFSAGCNDKLKWCLRINPKGLDEESRDYLSLYLLLV 155
Query: 157 DLSTITRDSKIYVHFTLRIRDQVLSKHNEKKA----STWLSTSSEDWGWSTFVELSYFNK 212
+ S++ F I + +K E KA + +DWG+ F+ +
Sbjct: 156 QCNK----SEVRAKFKFSILN---AKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLD 208
Query: 213 AENGFLMNDVCIVEAEVLRISKAL 236
NG L D + EV +++ +
Sbjct: 209 EANGLLPGDRLSIFCEVSVVAETV 232
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 12 EVYVIFRLFVLDQNKDEFLILQDAMGKERRFHVLK-LEWGFDQFIPLEEFNDASNGYLVG 70
EV F+ +L+ ++E AM +R + ++ +WGF +FI + D +NG L G
Sbjct: 161 EVRAKFKFSILNAKREE----TKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPG 216
Query: 71 DTCVFGAEVLV 81
D EV V
Sbjct: 217 DRLSIFCEVSV 227
>sp|Q54NN4|Y8514_DICDI TNF receptor-associated factor family protein DDB_G0285149
OS=Dictyostelium discoideum GN=DDB_G0285149 PE=3 SV=1
Length = 427
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 17/157 (10%)
Query: 83 ERNKCKGECLFLAKLTSASNYKHVWKIENFSKLEAKLYESEV----------FVAGNQKW 132
+R KC E L +LT+ + Y + W IEN+ + + EV F ++K+
Sbjct: 266 KRLKCSHETL-EKRLTNINKYSNQWVIENWMQKVIDIPNDEVTSTKRVSCPMFYFNSRKY 324
Query: 133 KIKLYPKGQGVGRGSHISVYLALADLSTITRDSKIYVHFTLRIRDQVLSKHNEKKASTWL 192
+ +P G +IS+YL L + S I + F+ I + +K +K+ +++
Sbjct: 325 NVSCFPNGFTPANKDYISLYLHLHEAS-----PNINIKFSFEIVNSDPTKSIKKEKNSYF 379
Query: 193 STSSEDWGWSTFVELSYFNKAENGFLMNDVCIVEAEV 229
+ + GW F E N GF++ + ++ E+
Sbjct: 380 Q-NDKGIGWEKFAECKTINTLGEGFVVGNKLTIKFEI 415
>sp|O22286|BPM3_ARATH BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis
thaliana GN=BPM3 PE=1 SV=1
Length = 408
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 102 NYKHVWKIENFSKLEA----KLYESEVFVAGNQKWKIKLYPKGQGV-GRGSHISVYLALA 156
N H + I+ +S + K +S++F G W I YP G+ + S+IS+++ALA
Sbjct: 24 NGSHQFTIQGYSLAKGMSPGKFIQSDIFSVGGYDWAIYFYPDGKNPEDQSSYISLFIALA 83
Query: 157 DLSTITRDSKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSED-----------WGWSTFV 205
S + I F L + DQ S + K + + E WG+ F
Sbjct: 84 SDS-----NDIRALFELTLMDQ--SGKGKHKVHSHFDRALEGGPYTLKYKGSMWGYKRFF 136
Query: 206 ELSYFNKAENGFLMNDVCIVEAEV 229
+ S ++ +L +D ++ V
Sbjct: 137 KRSALETSD--YLKDDCLVINCTV 158
>sp|Q980S9|METK_SULSO S-adenosylmethionine synthase OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=mat PE=1 SV=2
Length = 404
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 112 FSKLEAKLYESEVFVAGNQKWKIKLYPKGQ-----GVGRGSHISVYLALADLSTITRDSK 166
+KLE +YE+E + Q +K KL G+ G+ RG+ + + +A+A +S + D
Sbjct: 170 LTKLEKLVYETERHLNSKQ-FKAKLPEVGEDIKVMGLRRGNEVDLTIAMATISELIEDVN 228
Query: 167 IYVHFTLRIRDQVL 180
Y++ ++R+Q+L
Sbjct: 229 HYINVKEQVRNQIL 242
>sp|O59742|CLU_SCHPO Clustered mitochondria protein homolog OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=clu1 PE=3 SV=3
Length = 1173
Score = 35.4 bits (80), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 105 HVWKIENFSKLEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHI-SVYLALADLSTITR 163
H I +F+ L L+ SE F+ + +I + + G+ + S+YL LA L + +
Sbjct: 1064 HPNTINSFTNLSLMLHGSEKFIQSQKCLQIAVDLSDKIFGKTTPTASLYLQLAQLMVLNK 1123
Query: 164 DSKIYVHFTLRIRDQVLSK------HNEKKASTWLS 193
DS+ +H +R+ +L + N K+A WLS
Sbjct: 1124 DSRSALH-AVRVAYDILKETLGPDHQNTKEAEHWLS 1158
>sp|Q94420|MEL26_CAEEL Protein maternal effect lethal 26 OS=Caenorhabditis elegans
GN=mel-26 PE=1 SV=2
Length = 395
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 104 KHVWKIENFSKLEAKLYESEVFVA-GNQK--WKIKLYPKGQG 142
+H W ++NFS + E+ V++ G+++ W IK+YPKG G
Sbjct: 43 QHTWTVKNFSHCYQEYLENFVYLQRGDEQLTWSIKIYPKGNG 84
>sp|C3N824|METK_SULIY S-adenosylmethionine synthase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=mat PE=3 SV=1
Length = 404
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 112 FSKLEAKLYESEVFVAGNQKWKIKLYPKGQ-----GVGRGSHISVYLALADLSTITRDSK 166
F+KLE +YE+E + Q +K KL G+ G+ RG+ + + +A+A +S + D
Sbjct: 170 FTKLEKLVYETERHLNSKQ-FKAKLPEVGEDIKVMGLRRGNEVDLTIAMATISELIEDVN 228
Query: 167 IYVHFTLRIRDQVL 180
Y++ + ++++L
Sbjct: 229 HYINVKEQAKNEIL 242
>sp|C3MYC2|METK_SULIM S-adenosylmethionine synthase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=mat PE=3 SV=1
Length = 404
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 112 FSKLEAKLYESEVFVAGNQKWKIKLYPKGQ-----GVGRGSHISVYLALADLSTITRDSK 166
F+KLE +YE+E + Q +K KL G+ G+ RG+ + + +A+A +S + D
Sbjct: 170 FTKLEKLVYETERHLNSKQ-FKAKLPEVGEDIKVMGLRRGNEVDLTIAMATISELIEDVN 228
Query: 167 IYVHFTLRIRDQVL 180
Y++ + ++++L
Sbjct: 229 HYINVKEQAKNEIL 242
>sp|C3MJ04|METK_SULIL S-adenosylmethionine synthase OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=mat PE=3 SV=1
Length = 404
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 112 FSKLEAKLYESEVFVAGNQKWKIKLYPKGQ-----GVGRGSHISVYLALADLSTITRDSK 166
F+KLE +YE+E + Q +K KL G+ G+ RG+ + + +A+A +S + D
Sbjct: 170 FTKLEKLVYETERHLNSKQ-FKAKLPEVGEDIKVMGLRRGNEVDLTIAMATISELIEDVN 228
Query: 167 IYVHFTLRIRDQVL 180
Y++ + ++++L
Sbjct: 229 HYINVKEQAKNEIL 242
>sp|C4KIY2|METK_SULIK S-adenosylmethionine synthase OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=mat PE=3 SV=1
Length = 404
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 112 FSKLEAKLYESEVFVAGNQKWKIKLYPKGQ-----GVGRGSHISVYLALADLSTITRDSK 166
F+KLE +YE+E + Q +K KL G+ G+ RG+ + + +A+A +S + D
Sbjct: 170 FTKLEKLVYETERHLNSKQ-FKAKLPEVGEDIKVMGLRRGNEVDLTIAMATISELIEDVN 228
Query: 167 IYVHFTLRIRDQVL 180
Y++ + ++++L
Sbjct: 229 HYINVKEQAKNEIL 242
>sp|C3MZQ1|METK_SULIA S-adenosylmethionine synthase OS=Sulfolobus islandicus (strain
M.16.27) GN=mat PE=3 SV=1
Length = 404
Score = 34.3 bits (77), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 112 FSKLEAKLYESEVFVAGNQKWKIKLYPKGQ-----GVGRGSHISVYLALADLSTITRDSK 166
F+KLE +YE+E + Q +K KL G+ G+ RG+ + + +A+A +S + D
Sbjct: 170 FTKLEKLVYETERHLNSKQ-FKAKLPEVGEDIKVMGLRRGNEVDLTIAMATISELIEDVN 228
Query: 167 IYVHFTLRIRDQVL 180
Y++ + ++++L
Sbjct: 229 HYINVKEQAKNEIL 242
>sp|Q9SRV1|BPM4_ARATH BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis
thaliana GN=BPM4 PE=1 SV=1
Length = 465
Score = 34.3 bits (77), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 97 LTSASNYKHVWKIENFSKLEA----KLYESEVFVAGNQKWKIKLYPKGQGVGRGS-HISV 151
+T N H + I+ +S + K S+ F G +W I YP G+ S ++SV
Sbjct: 41 VTQTINGSHSFTIKGYSLAKGIGIGKHIASDTFTVGGYQWAIYFYPDGKNPEDNSAYVSV 100
Query: 152 YLALADLSTITRDSKIYVHFTLRIRDQ 178
++ALA T R F L + DQ
Sbjct: 101 FIALASDGTDVR-----ALFELSLLDQ 122
>sp|C3NF87|METK_SULIN S-adenosylmethionine synthase OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=mat PE=3 SV=1
Length = 404
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 112 FSKLEAKLYESEVFVAGNQKWKIKLYPKGQ-----GVGRGSHISVYLALADLSTITRDSK 166
F+KLE +YE+E + Q +K KL G+ G+ RG+ + + +A+A +S + D
Sbjct: 170 FTKLEKLVYETERHLNSKQ-FKAKLPEVGEDIKVMGLRRGNEVDLTIAMATISELIEDVN 228
Query: 167 IYVHFTLRIRDQVL 180
Y++ + ++++L
Sbjct: 229 HYINVKEQAKNKIL 242
>sp|Q9M8J9|BPM2_ARATH BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis
thaliana GN=BPM2 PE=1 SV=1
Length = 406
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 28/147 (19%)
Query: 98 TSASNYKHVWKIENFSKLEA----KLYESEVFVAGNQKWKIKLYPKGQGVGRGS-HISVY 152
T N H +KI +S ++ K S+ F+ G W I YP G+ S ++S++
Sbjct: 28 TETINGSHEFKISGYSLVKGMGIGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSVYVSLF 87
Query: 153 LALADLSTITRDSKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSED-----------WGW 201
+ALA + + + F L + DQ S + K + + E WG+
Sbjct: 88 IALA-----SEGADVRALFELTLVDQ--SGNERHKVHSHFGRTLESGPYTLKYRGSMWGY 140
Query: 202 STFVELSYFNKA----ENGFLMNDVCI 224
F + S + +NG L+ C+
Sbjct: 141 KRFFKRSLLESSDYLKDNGLLVR-CCV 166
>sp|Q1EBV6|BPM5_ARATH BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis
thaliana GN=BPM5 PE=1 SV=1
Length = 410
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 21/147 (14%)
Query: 97 LTSASNYKHVWKIENFSKLEA----KLYESEVFVAGNQKWKIKLYPKGQGV-GRGSHISV 151
+T N H + I+ +S + K S+ F G +W I YP G+ S++SV
Sbjct: 23 VTQTVNGSHQFVIQGYSLAKGMGIGKHIASDNFSVGGYQWGIFFYPDGKNPEDNSSYVSV 82
Query: 152 YLALADLSTITRDSKIYVHFTLRIRDQV------LSKHNEKK---ASTWLSTSSEDWGWS 202
++ALA T R F L + DQ + H E+ L WG+
Sbjct: 83 FIALASEGTEVR-----ALFELALVDQSGKGKHKVHSHFERSLDGGPYTLKYRGSMWGYK 137
Query: 203 TFVELSYFNKAENGFLMNDVCIVEAEV 229
F S ++ +L +D I+ V
Sbjct: 138 RFFRRSILETSD--YLKDDCLIINCTV 162
>sp|Q86K46|Y7243_DICDI TNF receptor-associated factor family protein DDB_G0277243
OS=Dictyostelium discoideum GN=DDB_G0277243 PE=3 SV=1
Length = 423
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 100 ASNYKHVWKIENFSK-----LEAKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLA 154
S YK W IEN+S+ + +S F G++ + + LYP G +S++L
Sbjct: 285 TSRYKGNWTIENWSQKLTHYPNNERLKSPYFCIGSKSFYVGLYPNGFNQTNAGFMSIFLH 344
Query: 155 LADLSTITRDSKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFN 211
L + + T + + F L D S EK T ++ G+S F+++ N
Sbjct: 345 LYEKPS-TSTTVVRFSFELLHSDPTKSLKFEKSNKY---TENKGSGFSQFIDIKMIN 397
>sp|P41886|BAT41_CAEEL BTB and MATH domain-containing protein 41 OS=Caenorhabditis elegans
GN=bath-41 PE=1 SV=1
Length = 418
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Query: 102 NYKHVWKIENFS-KLE----AKLYESEVFVAGNQKWKIKLYPKGQGVGRGSHISVYLALA 156
++ + W +E F+ +LE A+ + F G+ ++ +KL+P G+ ++S++L +
Sbjct: 45 SFTNYWSVERFTVQLELHNPAEFMLAPKFGDGDYEFVMKLFPNGKDEETAGYLSLFLLIN 104
Query: 157 DLSTITRDSKIYVHFTLRIRDQVLSKHNEKKASTWLSTSSEDWGWSTFVELSYFNKAENG 216
+ V FT+ D S H K T S S F L A N
Sbjct: 105 KCPNPRL--RFRVSFTVETADGPRSCHLNKNLVTI--NRSGIVTASKFFSLDILRSAMNV 160
Query: 217 FLMNDVCIVEAEV 229
++ ND+ + E+
Sbjct: 161 YIPNDILTIGCEL 173
>sp|Q7JKC3|UBP7_CAEEL Ubiquitin carboxyl-terminal hydrolase 7 OS=Caenorhabditis elegans
GN=usp-7 PE=2 SV=1
Length = 1135
Score = 32.0 bits (71), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 14/62 (22%)
Query: 42 FHVLKLEWGFDQFIPLEEFNDASNGYLVGDTCVFGAEVLVKERNKCKGECLFLAKLTSAS 101
FH +++WGF + + + +GY+V DT K C F A + + +
Sbjct: 135 FHNTEVDWGFSNYDQYDTLCNPKDGYVVNDT--------------IKLRCRFTADVPTGA 180
Query: 102 NY 103
NY
Sbjct: 181 NY 182
>sp|A1L4W5|BPM6_ARATH BTB/POZ and MATH domain-containing protein 6 OS=Arabidopsis
thaliana GN=BPM6 PE=1 SV=1
Length = 415
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 97 LTSASNYKHVWKIENFSKLEA----KLYESEVFVAGNQKWKIKLYPKGQGV-GRGSHISV 151
+T +N H + I+ +S + K S+ F G +W I +YP G+ S++SV
Sbjct: 30 VTQTTNGSHQFVIQGYSLAKGIGVGKHIASDNFSVGGYQWTIFVYPDGKNPEDNSSYVSV 89
Query: 152 YLALADLSTITR 163
++ LA T R
Sbjct: 90 FIVLASECTEVR 101
>sp|Q54FB9|Y0971_DICDI TNF receptor-associated factor family protein DDB_G0290971
OS=Dictyostelium discoideum GN=DDB_G0290971 PE=3 SV=1
Length = 445
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 127 AGNQKWKIKLYPKGQGVGRGSHISVYLALADLSTITRDSKIYVHFTLRIRDQVLSKHNEK 186
GN K+K+ LYP G +IS YL ++ + + V FT +Q K+
Sbjct: 341 VGNNKFKLTLYPNGYDESNKGNISAYLYRVSIN----EPAVKVSFTFVFNNQDSRKNRTY 396
Query: 187 KASTWLSTSSEDWGW 201
+ + GW
Sbjct: 397 RIQEYTFNGGATSGW 411
>sp|Q8L765|BPM1_ARATH BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis
thaliana GN=BPM1 PE=1 SV=1
Length = 407
Score = 31.2 bits (69), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 10/79 (12%)
Query: 105 HVWKIENFSKLEA----KLYESEVFVAGNQKWKIKLYPKGQGV-GRGSHISVYLALADLS 159
H +KI +S + K S+ F+ G W I YP G+ S++S+++ALA
Sbjct: 36 HEFKICGYSLAKGVGVGKYVASDTFMVGGYSWAIYFYPDGKSPEDNSSYVSLFIALA--- 92
Query: 160 TITRDSKIYVHFTLRIRDQ 178
+ + + F L + DQ
Sbjct: 93 --SEGADVRALFELTLVDQ 109
>sp|Q717B3|TDPZ1_MOUSE TD and POZ domain-containing protein 1 OS=Mus musculus GN=Tdpoz1
PE=2 SV=2
Length = 365
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 98 TSASNYKHVWKIENFSKLEAKLYE---SEVFVAGNQK---WKIKLYPKGQGVGRGSHISV 151
+S + + W I NFS + S VF + K W +++YPKG ++SV
Sbjct: 15 SSVEKFCYKWTISNFSFCMGGIQRRITSPVFSSEENKEVAWCLRVYPKGADKESKDYLSV 74
Query: 152 YLAL 155
YL L
Sbjct: 75 YLVL 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,047,621
Number of Sequences: 539616
Number of extensions: 3387133
Number of successful extensions: 7006
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 6952
Number of HSP's gapped (non-prelim): 86
length of query: 236
length of database: 191,569,459
effective HSP length: 114
effective length of query: 122
effective length of database: 130,053,235
effective search space: 15866494670
effective search space used: 15866494670
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)