BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026629
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Tumor- Inducing Toxins
Length = 309
Score = 251 bits (641), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 146/206 (70%), Gaps = 1/206 (0%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
+RY IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG +
Sbjct: 105 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 164
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 149
C+HGGLSP I T+D IR ++R E+PHEGP CDL+WSDP+D W +SPRGAG+ FG +
Sbjct: 165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDI 224
Query: 150 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENME 209
+ FNH N L LV RAHQLV EG + D+ +VT++SAPNYCYRCGN A+I+ ++ ++
Sbjct: 225 SETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRCGNQAAIMELDDTLK 283
Query: 210 REVKFFTETEENNQMRGPRTGVPYFL 235
F + R YFL
Sbjct: 284 YSFLQFDPAPRRGEPHVTRRTPDYFL 309
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And
Pp2a Core Enzyme
Length = 310
Score = 251 bits (641), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 146/206 (70%), Gaps = 1/206 (0%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
+RY IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG +
Sbjct: 106 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 165
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 149
C+HGGLSP I T+D IR ++R E+PHEGP CDL+WSDP+D W +SPRGAG+ FG +
Sbjct: 166 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDI 225
Query: 150 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENME 209
+ FNH N L LV RAHQLV EG + D+ +VT++SAPNYCYRCGN A+I+ ++ ++
Sbjct: 226 SETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRCGNQAAIMELDDTLK 284
Query: 210 REVKFFTETEENNQMRGPRTGVPYFL 235
F + R YFL
Sbjct: 285 YSFLQFDPAPRRGEPHVTRRTPDYFL 310
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound
To Okadaic Acid
pdb|2NPP|C Chain C, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|2NPP|F Chain F, Structure Of The Protein Phosphatase 2a Holoenzyme
pdb|3DW8|C Chain C, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3DW8|F Chain F, Structure Of A Protein Phosphatase 2a Holoenzyme With B55
Subunit
pdb|3K7V|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-1
pdb|3K7W|C Chain C, Protein Phosphatase 2a Core Complex Bound To
Dinophysistoxin-2
Length = 309
Score = 251 bits (641), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 146/206 (70%), Gaps = 1/206 (0%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
+RY IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG +
Sbjct: 105 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 164
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 149
C+HGGLSP I T+D IR ++R E+PHEGP CDL+WSDP+D W +SPRGAG+ FG +
Sbjct: 165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDI 224
Query: 150 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENME 209
+ FNH N L LV RAHQLV EG + D+ +VT++SAPNYCYRCGN A+I+ ++ ++
Sbjct: 225 SETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRCGNQAAIMELDDTLK 283
Query: 210 REVKFFTETEENNQMRGPRTGVPYFL 235
F + R YFL
Sbjct: 284 YSFLQFDPAPRRGEPHVTRRTPDYFL 309
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction
Length = 309
Score = 251 bits (641), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 146/206 (70%), Gaps = 1/206 (0%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
+RY IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG +
Sbjct: 105 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 164
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 149
C+HGGLSP I T+D IR ++R E+PHEGP CDL+WSDP+D W +SPRGAG+ FG +
Sbjct: 165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDI 224
Query: 150 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENME 209
+ FNH N L LV RAHQLV EG + D+ +VT++SAPNYCYRCGN A+I+ ++ ++
Sbjct: 225 SETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRCGNQAAIMELDDTLK 283
Query: 210 REVKFFTETEENNQMRGPRTGVPYFL 235
F + R YFL
Sbjct: 284 YSFLQFDPAPRRGEPHVTRRTPDYFL 309
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme.
pdb|2IAE|F Chain F, Crystal Structure Of A Protein Phosphatase 2a (Pp2a)
Holoenzyme
Length = 309
Score = 250 bits (638), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 146/204 (71%), Gaps = 9/204 (4%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
+RY IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG +
Sbjct: 105 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 164
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 149
C+HGGLSP I T+D IR ++R E+PHEGP CDL+WSDP+D W +SPRGAG+ FG +
Sbjct: 165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDI 224
Query: 150 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENME 209
+ FNH N L LV RAHQLV EG + D+ +VT++SAPNYCYRCGN A+I+ ++ ++
Sbjct: 225 SETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRCGNQAAIMELDDTLK 283
Query: 210 REVKFFTETEENNQMRGPRTGVPY 233
F PR G P+
Sbjct: 284 YSFLQFDP--------APRRGEPH 299
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a
Length = 304
Score = 249 bits (637), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
+RY IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG +
Sbjct: 105 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 164
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 149
C+HGGLSP I T+D IR ++R E+PHEGP CDL+WSDP+D W +SPRGAG+ FG +
Sbjct: 165 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDI 224
Query: 150 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENME 209
+ FNH N L LV RAHQLV EG + D+ +VT++SAPNYCYRCGN A+I+ ++ ++
Sbjct: 225 SETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRCGNQAAIMELDDTLK 283
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYL|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a)
Holoenzyme With The Catalytic Subunit Carboxyl Terminus
Truncated
pdb|2NYM|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
pdb|2NYM|F Chain F, Crystal Structure Of Protein Phosphatase 2a (Pp2a) With
C-Terminus Truncated Catalytic Subunit
Length = 293
Score = 249 bits (637), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 140/180 (77%), Gaps = 1/180 (0%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
+RY IT+LRGNHESRQ+TQVYGFYDEC RKYGNAN W+Y TD+FDYL L+A++DG +
Sbjct: 104 VRYRERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIF 163
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRV 149
C+HGGLSP I T+D IR ++R E+PHEGP CDL+WSDP+D W +SPRGAG+ FG +
Sbjct: 164 CLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPDDRGGWGISPRGAGYTFGQDI 223
Query: 150 TSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENME 209
+ FNH N L LV RAHQLV EG + D+ +VT++SAPNYCYRCGN A+I+ ++ ++
Sbjct: 224 SETFNHANGLTLVSRAHQLVMEGYNWC-HDRNVVTIFSAPNYCYRCGNQAAIMELDDTLK 282
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
pdb|1FJM|B Chain B, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type
1) Complexed With Microcystin-Lr Toxin
Length = 330
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 136/203 (66%), Gaps = 3/203 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 112 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 170
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D++ W + RG + FG+
Sbjct: 171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAE 230
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 231 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 289
Query: 209 EREVKFFTETEENNQMRGPRTGV 231
+ ++N G +G+
Sbjct: 290 MCSFQILKPADKNKGKYGQFSGL 312
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGG|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Spinophilin
pdb|3EGH|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3EGH|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1), The Pp1 Binding And Pdz Domains Of
Spinophilin And The Small Natural Molecular Toxin
Nodularin-R
pdb|3HVQ|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
pdb|3HVQ|B Chain B, Crystal Structure Of A Complex Between Protein Phosphatase
1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of
Neurabin
Length = 329
Score = 189 bits (481), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 136/203 (66%), Gaps = 3/203 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 111 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 169
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D++ W + RG + FG+
Sbjct: 170 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAE 229
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 230 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 288
Query: 209 EREVKFFTETEENNQMRGPRTGV 231
+ ++N G +G+
Sbjct: 289 MCSFQILKPADKNKGKYGQFSGL 311
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
pdb|4G9J|B Chain B, Protein SerTHR PHOSPHATASE-1 In Complex With
Cell-Permeable Peptide
Length = 331
Score = 189 bits (481), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 85/203 (41%), Positives = 136/203 (66%), Gaps = 3/203 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 113 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 171
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D++ W + RG + FG+
Sbjct: 172 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAE 231
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 232 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 290
Query: 209 EREVKFFTETEENNQMRGPRTGV 231
+ ++N G +G+
Sbjct: 291 MCSFQILKPADKNKGKYGQFSGL 313
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|C Chain C, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|E Chain E, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
pdb|3V4Y|G Chain G, Crystal Structure Of The First Nuclear Pp1 Holoenzyme
Length = 306
Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 133/198 (67%), Gaps = 3/198 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 111 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 169
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D++ W + RG + FG+
Sbjct: 170 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAE 229
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 230 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 288
Query: 209 EREVKFFTETEENNQMRG 226
+ ++N G
Sbjct: 289 MCSFQILKPADKNKGKYG 306
>pdb|3N5U|A Chain A, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
pdb|3N5U|B Chain B, Crystal Structure Of An Rb C-Terminal Peptide Bound To The
Catalytic Subunit Of Pp1
Length = 300
Score = 187 bits (474), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 128/180 (71%), Gaps = 3/180 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 112 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 170
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D++ W + RG + FG+
Sbjct: 171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAE 230
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 231 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 289
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7A|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Nodularin-R
pdb|3E7B|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
pdb|3E7B|B Chain B, Crystal Structure Of Protein Phosphatase-1 Bound To The
Natural Toxin Inhibitor Tautomycin
Length = 299
Score = 186 bits (473), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 128/180 (71%), Gaps = 3/180 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 111 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 169
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D++ W + RG + FG+
Sbjct: 170 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAE 229
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 230 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 288
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8A|B Chain B, Rat Pp1cgamma Complexed With Mouse Inhibitor-2
pdb|2O8G|A Chain A, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
pdb|2O8G|B Chain B, Rat Pp1c Gamma Complexed With Mouse Inhibitor-2
Length = 329
Score = 186 bits (471), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 118 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 176
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D+ W + RG + FG+
Sbjct: 177 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAE 236
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 237 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 295
Query: 209 EREVKFFTETEENN 222
+ E+
Sbjct: 296 MCSFQILKPAEKKK 309
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound
To Protein Phosphatase-1
pdb|1IT6|A Chain A, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|1IT6|B Chain B, Crystal Structure Of The Complex Between Calyculin A And
The Catalytic Subunit Of Protein Phosphatase 1
pdb|2BCD|A Chain A, X-Ray Crystal Structure Of Protein Phosphatase-1 With The
Marine Toxin Motuporin Bound
pdb|2BDX|A Chain A, X-Ray Crystal Structure Of Dihydromicrocystin-La Bound To
Protein Phosphatase-1
Length = 323
Score = 186 bits (471), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 130/194 (67%), Gaps = 3/194 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 112 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 170
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D+ W + RG + FG+
Sbjct: 171 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAE 230
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S +E +
Sbjct: 231 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGAMMSVDETL 289
Query: 209 EREVKFFTETEENN 222
+ E+
Sbjct: 290 MCSFQILKPAEKKK 303
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And
The Myosin Phosphatase Targeting Subunit 1 (mypt1)
Length = 330
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 135/206 (65%), Gaps = 5/206 (2%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R++ N W+ TD F+ L ++AI+D +
Sbjct: 114 IKYPENFFLLRGNHECASINRIYGFYDECKRRF-NIKLWKTFTDCFNCLPIAAIVDEKIF 172
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P G CDL+WSDP+ D++ W + RG + FG+
Sbjct: 173 CCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAD 232
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V S+F + ++LDL+CRAHQ+V++G ++ F + LVT++SAPNYC N ++S +E +
Sbjct: 233 VVSKFLNRHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGGMMSVDETL 291
Query: 209 EREVKFFTETEENN--QMRGPRTGVP 232
+ +E+ Q G +G P
Sbjct: 292 MCSFQILKPSEKKAKYQYGGLNSGRP 317
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin
Hybrid Bound To Okadaic Acid
Length = 293
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 126/180 (70%), Gaps = 3/180 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
++YP N LLRGNHE + ++YGFYDEC+R+Y N W+ TD F+ L ++AI+D +
Sbjct: 107 IKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPIAAIVDEKIF 165
Query: 90 CVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPE-DIETWAVSPRGAGWLFGSR 148
C HGGLSPD+++++QIR I R ++P +G CDL+WSDP+ D+ W + RG + FG+
Sbjct: 166 CCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAE 225
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSFNENM 208
V ++F H ++LDL+CRAHQ+V++G ++ F + LVT++SAPNY N +++S +E +
Sbjct: 226 VVAKFLHKHDLDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYLDVYNNAGAMMSVDETL 284
>pdb|1WAO|1 Chain 1, Pp5 Structure
pdb|1WAO|2 Chain 2, Pp5 Structure
pdb|1WAO|3 Chain 3, Pp5 Structure
pdb|1WAO|4 Chain 4, Pp5 Structure
Length = 477
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
L YP + LLRGNHE+ + Q+YGF E + KY A + ++VF++L L+ I+G VL
Sbjct: 269 LLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVL 327
Query: 90 CVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+HGGL S D T+D IR IERN + P GP CDL+WSDP+ ++S RG FG
Sbjct: 328 IMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPD 387
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASIL 202
VT F NNLD + R+H++ EG + + VTV+SAPNYC + GN AS +
Sbjct: 388 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGR-CVTVFSAPNYCDQMGNKASYI 440
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
pdb|1S95|B Chain B, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5
Length = 333
Score = 147 bits (372), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
L YP + LLRGNHE+ + Q+YGF E + KY A + ++VF++L L+ I+G VL
Sbjct: 125 LLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVL 183
Query: 90 CVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+HGGL S D T+D IR IERN + P GP CDL+WSDP+ ++S RG FG
Sbjct: 184 IMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPD 243
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASIL 202
VT F NNLD + R+H++ EG + + VTV+SAPNYC + GN AS +
Sbjct: 244 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGR-CVTVFSAPNYCDQMGNKASYI 296
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H60|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Mn2+ Atoms
pdb|3H61|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H61|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Norcantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H62|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H62|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H63|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H63|C Chain C, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H64|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H64|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Mn2+ Atoms Complexed With Endothall
pdb|3H66|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H66|B Chain B, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms
pdb|3H67|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H67|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Complexed With Cantharidic
Acid
pdb|3H68|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H68|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c)with Two Zn2+ Atoms Originally Soaked With
Cantharidin (Which Is Present In The Structure In The
Hydrolyzed Form)
pdb|3H69|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
pdb|3H69|D Chain D, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5
(Pp5c) With Two Zn2+ Atoms Complexed With Endothall
Length = 315
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 30 LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAIIDGTVL 89
L YP + LLRGNHE+ + Q+YGF E + KY A + ++VF++L L+ I+G VL
Sbjct: 116 LLYPDHFHLLRGNHETDNMNQIYGFEGEVKAKY-TAQMYELFSEVFEWLPLAQCINGKVL 174
Query: 90 CVHGGL-SPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+HGGL S D T+D IR IERN + P GP CDL+WSDP+ ++S RG FG
Sbjct: 175 IMHGGLFSEDGVTLDDIRKIERNRQPPDSGPMCDLLWSDPQPQNGRSISKRGVSCQFGPD 234
Query: 149 VTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASIL 202
VT F NNLD + R+H++ EG + + VTV+SAPNYC + GN AS +
Sbjct: 235 VTKAFLEENNLDYIIRSHEVKAEGYEVAHGGR-CVTVFSAPNYCDQMGNKASYI 287
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer
Length = 521
Score = 133 bits (335), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 30/216 (13%)
Query: 6 ITYLWVISLIGVTIVLKFSPFFCFLRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNA 65
+ YLW + ++ YP + LLRGNHE R LT+ + F EC+ KY +
Sbjct: 130 VLYLWALKIL----------------YPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SE 172
Query: 66 NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMW 125
+ C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP CD++W
Sbjct: 173 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILW 232
Query: 126 SDP-EDIETWAV-------SPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 177
SDP ED + RG + + EF NNL + RAH+ G +
Sbjct: 233 SDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYR 292
Query: 178 QDK-----GLVTVWSAPNYCYRCGNVASILSFNENM 208
+ + L+T++SAPNY N A++L + N+
Sbjct: 293 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 328
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex
Length = 327
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 6 ITYLWVISLIGVTIVLKFSPFFCFLRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNA 65
+ YLW + ++ YP + LLRGNHE R LT+ + F EC+ KY
Sbjct: 110 VLYLWALKIL----------------YPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE- 152
Query: 66 NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMW 125
+ C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP CD++W
Sbjct: 153 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILW 212
Query: 126 SDP-EDIETWAV-------SPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 177
SDP ED + RG + + EF NNL + RAH+ G +
Sbjct: 213 SDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYR 272
Query: 178 QDK-----GLVTVWSAPNYCYRCGNVASILSFNENM 208
+ + L+T++SAPNY N A++L + N+
Sbjct: 273 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 308
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|E Chain E, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 372
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 6 ITYLWVISLIGVTIVLKFSPFFCFLRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNA 65
+ YLW + ++ YP + LLRGNHE R LT+ + F EC+ KY
Sbjct: 130 VLYLWALKIL----------------YPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE- 172
Query: 66 NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMW 125
+ C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP CD++W
Sbjct: 173 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILW 232
Query: 126 SDP-EDIETWAV-------SPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 177
SDP ED + RG + + EF NNL + RAH+ G +
Sbjct: 233 SDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYR 292
Query: 178 QDK-----GLVTVWSAPNYCYRCGNVASILSFNENM 208
+ + L+T++SAPNY N A++L + N+
Sbjct: 293 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 328
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|C Chain C, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 357
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 6 ITYLWVISLIGVTIVLKFSPFFCFLRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNA 65
+ YLW + ++ YP + LLRGNHE R LT+ + F EC+ KY
Sbjct: 117 VLYLWALKIL----------------YPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE- 159
Query: 66 NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMW 125
+ C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP CD++W
Sbjct: 160 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILW 219
Query: 126 SDP-EDIETWAV-------SPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 177
SDP ED + RG + + EF NNL + RAH+ G +
Sbjct: 220 SDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYR 279
Query: 178 QDK-----GLVTVWSAPNYCYRCGNVASILSFNENM 208
+ + L+T++SAPNY N A++L + N+
Sbjct: 280 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 315
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
Length = 375
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 30/216 (13%)
Query: 6 ITYLWVISLIGVTIVLKFSPFFCFLRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNA 65
+ YLW + ++ YP + LLRGNHE R LT+ + F EC+ KY +
Sbjct: 113 VLYLWALKIL----------------YPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SE 155
Query: 66 NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMW 125
+ C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP CD++W
Sbjct: 156 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILW 215
Query: 126 SDP-EDIETWAV-------SPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 177
SDP ED + RG + + EF NNL + RAH+ G +
Sbjct: 216 SDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYR 275
Query: 178 QDK-----GLVTVWSAPNYCYRCGNVASILSFNENM 208
+ + L+T++SAPNY N A++L + N+
Sbjct: 276 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 311
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|C Chain C, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 383
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 110/216 (50%), Gaps = 30/216 (13%)
Query: 6 ITYLWVISLIGVTIVLKFSPFFCFLRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNA 65
+ YLW + ++ YP + LLRGNHE R LT+ + F EC+ KY
Sbjct: 133 VLYLWALKIL----------------YPKTLFLLRGNHECRHLTEYFTFKQECKIKYSE- 175
Query: 66 NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMW 125
+ C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP CD++W
Sbjct: 176 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILW 235
Query: 126 SDP-EDIETWAV-------SPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 177
SDP ED + RG + + EF NNL + RAH+ G +
Sbjct: 236 SDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYR 295
Query: 178 QDK-----GLVTVWSAPNYCYRCGNVASILSFNENM 208
+ + L+T++SAPNY N A++L + N+
Sbjct: 296 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 331
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 373
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 30/216 (13%)
Query: 6 ITYLWVISLIGVTIVLKFSPFFCFLRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNA 65
+ YLW + ++ YP + LLRGNHE R LT+ + F EC+ KY +
Sbjct: 111 VLYLWALKIL----------------YPKTLFLLRGNHECRHLTEYFTFKQECKIKY-SE 153
Query: 66 NAWRYCTDVFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMW 125
+ C D FD L L+A+++ LCVHGGLSP+I T+D IR ++R E P GP CD++W
Sbjct: 154 RVYDACMDAFDCLPLAALMNQQFLCVHGGLSPEINTLDDIRKLDRFKEPPAYGPMCDILW 213
Query: 126 SDP-EDIETWAV-------SPRGAGWLFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMF 177
SDP ED + RG + + EF NNL + RAH+ G +
Sbjct: 214 SDPLEDFGNEKTQEHFTHNTVRGCSYFYSYPAVCEFLQHNNLLSILRAHEAQDAGYRMYR 273
Query: 178 QDK-----GLVTVWSAPNYCYRCGNVASILSFNENM 208
+ + L+T++SAPNY N A++L + N+
Sbjct: 274 KSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV 309
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
pdb|3ICF|B Chain B, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM
SACCHAROMYCES Cerevisiae With Similarity To Human
Phosphatase Pp5
Length = 335
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 100/180 (55%), Gaps = 6/180 (3%)
Query: 26 FFCF-LRYPANITLLRGNHESRQLTQVYGFYDECQRKYGNANAWRYCTDVFDYLTLSAII 84
F+C + +P N L RGNHES ++YGF DEC+ KY + + F+ L L+ +I
Sbjct: 115 FYCLKILHPNNFFLNRGNHESDNXNKIYGFEDECKYKY-SQRIFNXFAQSFESLPLATLI 173
Query: 85 DGTVLCVHGGLSPDIR-TIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGW 143
+ L HGGL D T+ + I+R + P +G F +L+W+DP++ S RG G
Sbjct: 174 NNDYLVXHGGLPSDPSATLSDFKNIDRFAQPPRDGAFXELLWADPQEANGXGPSQRGLGH 233
Query: 144 LFGSRVTSEFNHINNLDLVCRAHQLVQEGLKYMFQDKG-LVTVWSAPNYCYRCGNVASIL 202
FG +T F N L + R+H+L G++ F+ KG L TV+SAPNYC GN+ ++
Sbjct: 234 AFGPDITDRFLRNNKLRKIFRSHELRXGGVQ--FEQKGKLXTVFSAPNYCDSQGNLGGVI 291
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 141 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 200
Query: 149 VTSEFNH 155
+T H
Sbjct: 201 LTEIVTH 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 149 VTSEFNH 155
+T H
Sbjct: 200 LTEIVTH 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 142 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 201
Query: 149 VTSEFNH 155
+T H
Sbjct: 202 LTEIVTH 208
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 149 VTSEFNH 155
+T H
Sbjct: 200 LTEIVTH 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 136 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 195
Query: 149 VTSEFNH 155
+T H
Sbjct: 196 LTEIVTH 202
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 149 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 208
Query: 149 VTSEFNH 155
+T H
Sbjct: 209 LTEIVTH 215
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 135 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 194
Query: 149 VTSEFNH 155
+T H
Sbjct: 195 LTEIVTH 201
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 149 VTSEFNH 155
+T H
Sbjct: 206 LTEIVTH 212
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 148 ILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 207
Query: 149 VTSEFNH 155
+T H
Sbjct: 208 LTEIVTH 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 199
Query: 149 VTSEFNH 155
+T H
Sbjct: 200 LTEIVTH 206
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 146 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 205
Query: 149 VTSEFNH 155
+T H
Sbjct: 206 LTEIVTH 212
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 145 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 204
Query: 149 VTSEFNH 155
+T H
Sbjct: 205 LTEIVTH 211
>pdb|4ADG|A Chain A, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form Ii)
pdb|4ADG|B Chain B, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form Ii)
pdb|4ADG|C Chain C, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form Ii)
pdb|4ADI|A Chain A, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form I)
pdb|4ADI|B Chain B, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form I)
pdb|4ADI|C Chain C, Crystal Structure Of The Rubella Virus Envelope
Glycoprotein E1 In Post-fusion Form (crystal Form I)
pdb|4ADJ|A Chain A, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 1mm Of
Calcium Acetate
pdb|4ADJ|B Chain B, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 1mm Of
Calcium Acetate
pdb|4ADJ|C Chain C, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 1mm Of
Calcium Acetate
pdb|4B3V|A Chain A, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 20mm Of
Calcium Acetate
pdb|4B3V|B Chain B, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 20mm Of
Calcium Acetate
pdb|4B3V|C Chain C, Crystal Structure Of The Rubella Virus Glycoprotein E1 In
Its Post-fusion Form Crystallized In Presence Of 20mm Of
Calcium Acetate
Length = 473
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 57 ECQRKYGNANA--WRYCTD-VFDYLTLSAIIDGTVLCVHGGLSPDIRTIDQIRVIERNCE 113
E + +G+++A W + TD V L++ + V + RT+ Q+ V +C
Sbjct: 118 EVEPAFGHSDAACWGFPTDTVMSVFALASYVQHPHKTVRVKFHTETRTVWQLSVAGVSCN 177
Query: 114 IPHEGPFCD 122
+ E PFC+
Sbjct: 178 VTTEHPFCN 186
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 26/67 (38%)
Query: 89 LCVHGGLSPDIRTIDQIRVIERNCEIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSR 148
+ V LS I R+IE N EG + W+ PE I + + W FG
Sbjct: 150 ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL 209
Query: 149 VTSEFNH 155
+T H
Sbjct: 210 LTEIVTH 216
>pdb|1JSN|A Chain A, Structure Of Avian H5 Haemagglutinin Complexed With Lsta
Receptro Analog
pdb|1JSO|A Chain A, Structure Of Avian H5 Haemagglutinin Bound To Lstc
Receptor Analog
pdb|1JSM|A Chain A, Structure Of H5 Avian Haemagglutinin
Length = 325
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 113 EIPHEGPFCDLMWSDPEDIETWAVSPRGAGWLFGSRVTSEF 153
E H G CDL P + +V AGWL G+ + EF
Sbjct: 34 EKTHNGKLCDLNGVKPLILRDCSV----AGWLLGNPMCDEF 70
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.141 0.462
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,767,594
Number of Sequences: 62578
Number of extensions: 328428
Number of successful extensions: 928
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 818
Number of HSP's gapped (non-prelim): 43
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)