BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026630
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 83/130 (63%), Gaps = 5/130 (3%)
Query: 104 YSYKDLQKATCNFTT--LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-EKEFQTEVM 160
+S ++LQ A+ NF+ ++G+G FG VYK +++ G VAVK L + QG E +FQTEV
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALD 218
++ HRNL+ L G+C + +LVY +M+ GS+AS L + E+ PL W R IAL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 219 VARGLEYLHD 228
ARGL YLHD
Sbjct: 148 SARGLAYLHD 157
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 5/130 (3%)
Query: 104 YSYKDLQKATCNF--TTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-EKEFQTEVM 160
+S ++LQ A+ NF ++G+G FG VYK +++ G VAVK L + QG E +FQTEV
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALD 218
++ HRNL+ L G+C + +LVY +M+ GS+AS L + E+ PL W R IAL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 219 VARGLEYLHD 228
ARGL YLHD
Sbjct: 140 SARGLAYLHD 149
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 101 IPEYSYK----DLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE 154
+P SY+ DL++AT NF LIG G FG VYK + G VA+K +S QG +E
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLR 212
F+TE+ L H +LV+L+G+C E+ + +L+Y +M G+L HLY D ++W R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 213 VHIALDVARGLEYLHDGVSCH 233
+ I + ARGL YLH H
Sbjct: 142 LEICIGAARGLHYLHTRAIIH 162
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 101 IPEYSYK----DLQKATCNFT--TLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKE 154
+P SY+ DL++AT NF LIG G FG VYK + G VA+K +S QG +E
Sbjct: 22 VPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEE 81
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLR 212
F+TE+ L H +LV+L+G+C E+ + +L+Y +M G+L HLY D ++W R
Sbjct: 82 FETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQR 141
Query: 213 VHIALDVARGLEYLHDGVSCH 233
+ I + ARGL YLH H
Sbjct: 142 LEICIGAARGLHYLHTRAIIH 162
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 96 VSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
VS + +S+ +L+ T NF +G+G FG VYK ++ TVAVK LA
Sbjct: 7 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAM 65
Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DE 202
+++ +++F E+ ++ + H NLV L+G+ ++ LVYV+M GSL L +
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
PL+W++R IA A G+ +LH+ H
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 92 RSNVVSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKV 143
+S VS + +S+ +L+ T NF +G+G FG VYK ++ TVAVK
Sbjct: 3 KSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKK 61
Query: 144 LAT----DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
LA +++ +++F E+ ++ + H NLV L+G+ ++ LVYV+M GSL L
Sbjct: 62 LAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL 121
Query: 200 Y-DENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ PL+W++R IA A G+ +LH+ H
Sbjct: 122 SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIH 156
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 96 VSASGIPEYSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT- 146
VS + +S+ +L+ T NF +G+G FG VYK ++ TVAVK LA
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAM 59
Query: 147 ---DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DE 202
+++ +++F E+ ++ + H NLV L+G+ ++ LVYV+M GSL L +
Sbjct: 60 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 119
Query: 203 NYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
PL+W++R IA A G+ +LH+ H
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHENHHIH 150
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 104 YSYKDLQKATCNFT--------TLIGQGAFGPVYKAQMSTGETVAVKVLAT----DSKQG 151
+S+ +L+ T NF G+G FG VYK ++ TVAVK LA +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNT-TVAVKKLAAMVDITTEEL 64
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-DENYGPLTWN 210
+++F E+ + + H NLV L+G+ ++ LVYV+ GSL L + PL+W+
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 211 LRVHIALDVARGLEYLHDGVSCH 233
R IA A G+ +LH+ H
Sbjct: 125 XRCKIAQGAANGINFLHENHHIH 147
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 99 SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE----- 152
S P+ L + IG+G FG V+K ++ ++V A+K L +GE
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 153 --KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
+EFQ EV ++ L+H N+V L G + +V F+ G L L D+ + P+ W+
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWS 122
Query: 211 LRVHIALDVARGLEYLHD 228
+++ + LD+A G+EY+ +
Sbjct: 123 VKLRLMLDIALGIEYMQN 140
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 99 SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE----- 152
S P+ L + IG+G FG V+K ++ ++V A+K L +GE
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 153 --KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
+EFQ EV ++ L+H N+V L G + +V F+ G L L D+ + P+ W+
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWS 122
Query: 211 LRVHIALDVARGLEYLHD 228
+++ + LD+A G+EY+ +
Sbjct: 123 VKLRLMLDIALGIEYMQN 140
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 99 SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVLATDSKQGE----- 152
S P+ L + IG+G FG V+K ++ ++V A+K L +GE
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 153 --KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
+EFQ EV ++ L+H N+V L G + +V F+ G L L D+ + P+ W+
Sbjct: 66 KFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH-PIKWS 122
Query: 211 LRVHIALDVARGLEYLHD 228
+++ + LD+A G+EY+ +
Sbjct: 123 VKLRLMLDIALGIEYMQN 140
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK--EFQTEVMLLGRL 165
D+ N IG G+FG V++A+ G VAVK+L E+ EF EV ++ RL
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLE 224
H N+V +G + +V ++S+GSL L+ L R+ +A DVA+G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 225 YLHD 228
YLH+
Sbjct: 152 YLHN 155
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK--EFQTEVMLLGRL 165
D+ N IG G+FG V++A+ G VAVK+L E+ EF EV ++ RL
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRL 91
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDEN-YGPLTWNLRVHIALDVARGLE 224
H N+V +G + +V ++S+GSL L+ L R+ +A DVA+G+
Sbjct: 92 RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMN 151
Query: 225 YLHD 228
YLH+
Sbjct: 152 YLHN 155
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ +L+H+N+V +G + ++ M+ G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
L S L + P L +H+A D+A G +YL + H
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
++ +EYL H
Sbjct: 120 ISSAMEYLEKKNFIH 134
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
++ +EYL H
Sbjct: 120 ISSAMEYLEKKNFIH 134
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
++ +EYL H
Sbjct: 120 ISSAMEYLEKKNFIH 134
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTE 158
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE 59
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALD 218
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A
Sbjct: 60 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQ 119
Query: 219 VARGLEYLHDGVSCH 233
++ +EYL H
Sbjct: 120 ISSAMEYLEKKNFIH 134
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ +L+H+N+V +G + ++ M+ G L S L + P L
Sbjct: 95 FLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
+H+A D+A G +YL + H
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIH 178
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 99 SGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQT 157
G P Y ++++ +G G +G VY+ TVAVK L D+ + E EF
Sbjct: 13 QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLK 71
Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
E ++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A
Sbjct: 72 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMAT 131
Query: 218 DVARGLEYLHDGVSCH 233
++ +EYL H
Sbjct: 132 QISSAMEYLEKKNFIH 147
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
L S L + P L +H+A D+A G +YL + H
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 27 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 86
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 87 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 146
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
L S L + P L +H+A D+A G +YL + H
Sbjct: 147 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 190
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 1 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 60
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 61 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 120
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
L S L + P L +H+A D+A G +YL + H
Sbjct: 121 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 164
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 92 RSNVVSASGIPEYSY-------KDLQKATCNFTTLI---GQGAFGPVYKAQMS------T 135
R++ + P YS+ DL++ TLI G GAFG VY+ Q+S +
Sbjct: 7 RTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPS 66
Query: 136 GETVAVKVLA-TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGS 194
VAVK L S+Q E +F E +++ + +H+N+V +G + ++ M+ G
Sbjct: 67 PLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGD 126
Query: 195 LASHLYDENYGP-----LTWNLRVHIALDVARGLEYLHDGVSCH 233
L S L + P L +H+A D+A G +YL + H
Sbjct: 127 LKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIH 170
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 210 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 268
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A ++
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 328
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 329 SAMEYLEKKNFIH 341
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 127 SAMEYLEKKNFIH 139
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 123 SAMEYLEKKNFIH 135
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 249 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 307
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 367
Query: 221 RGLEYL 226
+EYL
Sbjct: 368 SAMEYL 373
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 127 SAMEYLEKKNFIH 139
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 207 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 265
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 325
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 326 SAMEYLEKKNFIH 338
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 210 NLRVHIALDVARGLEYLHD 228
+H+A D+A G +YL +
Sbjct: 140 LDLLHVARDIACGCQYLEE 158
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 80 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 139
Query: 210 NLRVHIALDVARGLEYLHD 228
+H+A D+A G +YL +
Sbjct: 140 LDLLHVARDIACGCQYLEE 158
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 210 NLRVHIALDVARGLEYLHD 228
+H+A D+A G +YL +
Sbjct: 132 LDLLHVARDIACGCQYLEE 150
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 124 SAMEYLEKKNFIH 136
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 4 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 62
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 122
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 123 SAMEYLEKKNFIH 135
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 156
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
+H+A D+A G +YL + H
Sbjct: 157 LDLLHVARDIACGCQYLEENHFIH 180
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 127 SAMEYLEKKNFIH 139
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 180
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
+H+A D+A G +YL + H
Sbjct: 181 LDLLHVARDIACGCQYLEENHFIH 204
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 157
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
+H+A D+A G +YL + H
Sbjct: 158 LDLLHVARDIACGCQYLEENHFIH 181
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 127 SAMEYLEKKNFIH 139
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 124 SAMEYLEKKNFIH 136
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
+H+A D+A G +YL + H
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIH 178
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 5 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 63
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 123
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 124 SAMEYLEKKNFIH 136
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 105 SYKDLQKATCNFTTLI---GQGAFGPVYKAQMS------TGETVAVKVLA-TDSKQGEKE 154
S DL++ TLI G GAFG VY+ Q+S + VAVK L S+Q E +
Sbjct: 35 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD 94
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-----LTW 209
F E +++ + +H+N+V +G + ++ M+ G L S L + P L
Sbjct: 95 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 154
Query: 210 NLRVHIALDVARGLEYLHDGVSCH 233
+H+A D+A G +YL + H
Sbjct: 155 LDLLHVARDIACGCQYLEENHFIH 178
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 7 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 65
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 125
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 126 SAMEYLEKKNFIH 138
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
+ + F IG G FG V+ + VA+K + S E +F E ++ +L H
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHP 82
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
LV L G C E+ LV+ FM G L+ +L + G + + LDV G+ YL +
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 141
Query: 229 GVSCH 233
H
Sbjct: 142 ACVIH 146
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 8 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 66
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 126
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 127 SAMEYLEKKNFIH 139
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
+ + F IG G FG V+ + VA+K + + E++F E ++ +L H
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 60
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
LV L G C E+ LV+ FM G L+ +L + G + + LDV G+ YL +
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 119
Query: 229 GVSCH 233
H
Sbjct: 120 ACVIH 124
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
+ + F IG G FG V+ + VA+K + + E++F E ++ +L H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
LV L G C E+ LV+ FM G L+ +L + G + + LDV G+ YL +
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 121
Query: 229 GVSCH 233
H
Sbjct: 122 ACVIH 126
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
+ + F IG G FG V+ + VA+K + + E++F E ++ +L H
Sbjct: 7 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 65
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
LV L G C E+ LV+ FM G L+ +L + G + + LDV G+ YL +
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 124
Query: 229 GVSCH 233
H
Sbjct: 125 ACVIH 129
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 122 SAMEYLEKKNFIH 134
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVM 160
P Y ++++ +G G +G VY+ TVAVK L D+ + E EF E
Sbjct: 3 PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAA 61
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
++ + H NLV L+G C + ++ FM+ G+L +L + N + + +++A ++
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQIS 121
Query: 221 RGLEYLHDGVSCH 233
+EYL H
Sbjct: 122 SAMEYLEKKNFIH 134
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
+ + F IG G FG V+ + VA+K + + E++F E ++ +L H
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 62
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
LV L G C E+ LV+ FM G L+ +L + G + + LDV G+ YL +
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 121
Query: 229 GVSCH 233
H
Sbjct: 122 ASVIH 126
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSK----QGEKEFQTEVMLLG 163
++ A +IG G FG VY+A G+ VAVK D Q + + E L
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFA 61
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
L H N++ L G C ++ LV F G L L + P ++ V+ A+ +ARG+
Sbjct: 62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP---DILVNWAVQIARGM 118
Query: 224 EYLHD 228
YLHD
Sbjct: 119 NYLHD 123
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
++++ +G G FG VY+ TVAVK L D+ + E EF E ++ +
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A ++ +EYL
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 227 HDGVSCH 233
H
Sbjct: 126 EKKNFIH 132
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
Q + +G FG V+KAQ+ E VAVK+ KQ + + EV L + H
Sbjct: 21 FQSMPLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHE 78
Query: 169 NLVNLVGYCAEKG------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARG 222
N++ +G AEK L+ F KGSL+ L ++WN HIA +ARG
Sbjct: 79 NILQFIG--AEKRGTSVDVDLWLITAFHEKGSLSDFL---KANVVSWNELCHIAETMARG 133
Query: 223 LEYLHDGV 230
L YLH+ +
Sbjct: 134 LAYLHEDI 141
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHR 168
+ + F IG G FG V+ + VA+K + + E++F E ++ +L H
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI-REGAMSEEDFIEEAEVMMKLSHP 63
Query: 169 NLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHD 228
LV L G C E+ LV FM G L+ +L + G + + LDV G+ YL +
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEE 122
Query: 229 GVSCH 233
H
Sbjct: 123 ACVIH 127
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 2/121 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
++++ +G G +G VY+ TVAVK L D+ + E EF E ++ +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A ++ +EYL
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 227 H 227
Sbjct: 126 E 126
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 113 TCNFTTLIGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLV 171
T + T ++G G FG V+K + +TG +A K++ T + ++E + E+ ++ +L H NL+
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLI 149
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
L K +LV ++ G L + DE+Y LT + + G+ ++H
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTILFMKQICEGIRHMHQMYI 208
Query: 232 CHL 234
HL
Sbjct: 209 LHL 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 2/127 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
++++ +G G +G VY+ TVAVK L D+ + E EF E ++ +
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
H NLV L+G C + ++ FM+ G+L +L + N ++ + +++A ++ +EYL
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 227 HDGVSCH 233
H
Sbjct: 126 EKKNFIH 132
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S K+F E LL L H ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGP-------------LTWNLRVHIALDVA 220
G C E ++V+ +M G L L +GP LT + +HIA +A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFL--RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 221 RGLEYL 226
G+ YL
Sbjct: 139 AGMVYL 144
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 11/125 (8%)
Query: 111 KATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
+ + + +G FG V+KAQ+ + VAVK+ KQ + + E+ + H NL
Sbjct: 14 RGSLQLLEIKARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENL 71
Query: 171 VNLVGYCAEKGQHM-----LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEY 225
+ + ++G ++ L+ F KGSL +L +TWN H+A ++RGL Y
Sbjct: 72 LQFIA-AEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSY 127
Query: 226 LHDGV 230
LH+ V
Sbjct: 128 LHEDV 132
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 65 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 124
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 125 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 184
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 185 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 226
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG V++ + +TG A K + T + ++ + E+ + L H LVNL
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL 234
+ + +++Y FMS G L + DE + ++ + V V +GL ++H+ HL
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHL 173
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 11 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 70
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 71 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 130
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 131 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 172
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 8 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 67
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 68 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 127
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 128 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 169
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+G FG V A+ TVAVK+L D
Sbjct: 6 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 65
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 66 ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 125
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 126 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 167
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 2/116 (1%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG V++ + +TG A K + T + ++ + E+ + L H LVNL
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL 234
+ + +++Y FMS G L + DE + ++ + V V +GL ++H+ HL
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHL 279
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
KG +V +M+KGSL +L L + + +LDV +EYL
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
KG +V +M+KGSL +L L + + +LDV +EYL
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
KG +V +M+KGSL +L L + + +LDV +EYL
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N+++L+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG+G FG V G VAVK + D+ + F E ++ +L H NLV L+G E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 180 -KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
KG +V +M+KGSL +L L + + +LDV +EYL
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM--------STGETVAVKVLATD 147
VS +PE + + +G+GAFG V A+ TVAVK+L D
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD 78
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++ L+G C + G ++ + SKG+L +L
Sbjct: 79 ATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPP 138
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
YD N P +T+ V +ARG+EYL H
Sbjct: 139 GMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIH 180
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 167
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 168
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 141
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 144
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 147
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 146
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
VS +PE +L + +G+GAFG V K + + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
Y+ ++ P L+ V A VARG+EYL
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
VS +PE +L + +G+GAFG V K + + VAVK+L +D
Sbjct: 4 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 63
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 64 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 123
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
Y+ ++ P L+ V A VARG+EYL
Sbjct: 124 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 158
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 148
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G++YL
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKYL 149
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S+ ++FQ E LL L H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
G C E ++V+ +M G L L D GPL + +A VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 221 RGLEYL 226
G+ YL
Sbjct: 169 AGMVYL 174
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
VS +PE +L + +G+GAFG V K + + VAVK+L +D
Sbjct: 5 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 64
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 65 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 124
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
Y+ ++ P L+ V A VARG+EYL
Sbjct: 125 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 159
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
VS +PE +L + +G+GAFG V K + + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
Y+ ++ P L+ V A VARG+EYL
Sbjct: 132 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S+ ++FQ E LL L H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
G C E ++V+ +M G L L D GPL + +A VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 221 RGLEYL 226
G+ YL
Sbjct: 140 AGMVYL 145
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
VS +PE +L + +G+GAFG V K + + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
Y+ ++ P L+ V A VARG+EYL
Sbjct: 132 GLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 56/126 (44%), Gaps = 19/126 (15%)
Query: 120 IGQGAFGPVYKAQM------STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L S+ ++FQ E LL L H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLY-------------DENYGPLTWNLRVHIALDVA 220
G C E ++V+ +M G L L D GPL + +A VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 221 RGLEYL 226
G+ YL
Sbjct: 146 AGMVYL 151
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
VS +PE +L + +G+GAFG V K + + VAVK+L +D
Sbjct: 53 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 112
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 113 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 172
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
Y+ ++ P L+ V A VARG+EYL H
Sbjct: 173 GLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH 214
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
Y L F +IG+G FG V KA++ + ++ SK ++F E+ +
Sbjct: 19 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 78
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--------------DENYGP 206
L +L HH N++NL+G C +G L + G+L L +
Sbjct: 79 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 207 LTWNLRVHIALDVARGLEYL 226
L+ +H A DVARG++YL
Sbjct: 139 LSSQQLLHFAADVARGMDYL 158
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
Y L F +IG+G FG V KA++ + ++ SK ++F E+ +
Sbjct: 16 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 75
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--------------DENYGP 206
L +L HH N++NL+G C +G L + G+L L +
Sbjct: 76 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 207 LTWNLRVHIALDVARGLEYL 226
L+ +H A DVARG++YL
Sbjct: 136 LSSQQLLHFAADVARGMDYL 155
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 2/121 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
++++ +G G +G VY TVAVK L D+ + E EF E ++ +
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 86
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
H NLV L+G C + +V +M G+L +L + N +T + +++A ++ +EYL
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYL 146
Query: 227 H 227
Sbjct: 147 E 147
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 208
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 19/140 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKAQMSTG----ETVAVKVLATDSKQGEKEFQTEVML 161
Y L F +IG+G FG V KA++ + ++ SK ++F E+ +
Sbjct: 9 YPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEV 68
Query: 162 LGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY--------------DENYGP 206
L +L HH N++NL+G C +G L + G+L L +
Sbjct: 69 LCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 207 LTWNLRVHIALDVARGLEYL 226
L+ +H A DVARG++YL
Sbjct: 129 LSSQQLLHFAADVARGMDYL 148
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 150
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 154
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 149
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 76/155 (49%), Gaps = 24/155 (15%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATD 147
VS +PE +L + +G+GAFG V K + + VAVK+L +D
Sbjct: 12 VSEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 148 SKQGE-KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL------ 199
+ + + + +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPP 131
Query: 200 -----YDENYGP---LTWNLRVHIALDVARGLEYL 226
++ ++ P L+ V A VARG+EYL
Sbjct: 132 GLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 66/118 (55%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKAQM--STGETV--AVKVLATDSKQGE-KEFQTEVMLLGRLHHRN 169
+F +IG+G FG VY + + G+ + AVK L + GE +F TE +++ H N
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 170 LVNLVGYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+++L+G C +G ++V +M G L + + +E + P +L + L VA+G+++L
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-IGFGLQVAKGMKFL 147
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATDSKQGE 152
+PE +L + +G+GAFG V K + + VAVK+L +D+ + +
Sbjct: 2 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 61
Query: 153 -KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------- 199
+ +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 62 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYC 121
Query: 200 YDENYGP---LTWNLRVHIALDVARGLEYL 226
Y+ ++ P L+ V A VARG+EYL
Sbjct: 122 YNPSHNPEEQLSSKDLVSCAYQVARGMEYL 151
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVM 160
+ + N +G+GAFG V +A + +T TVAVK+L + E + +E+
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 161 LLGRL-HHRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHL---------YDENYGP-LT 208
+L + HH N+VNL+G C + G ++V V F G+L+++L Y + Y LT
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 209 WNLRVHIALDVARGLEYL 226
+ + VA+G+E+L
Sbjct: 143 LEHLIXYSFQVAKGMEFL 160
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVY--------KAQMSTGETVAVKVLATDSKQGE 152
+PE +L + +G+GAFG V K + + VAVK+L +D+ + +
Sbjct: 6 LPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD 65
Query: 153 -KEFQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL----------- 199
+ +E+ ++ + H+N++NL+G C + G ++ + SKG+L +L
Sbjct: 66 LSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYS 125
Query: 200 YDENYGP---LTWNLRVHIALDVARGLEYLHDGVSCH 233
Y+ ++ P L+ V A VARG+EYL H
Sbjct: 126 YNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH 162
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 21/128 (16%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDEN-----YGP-------LTWNLRVHIALD 218
NL+G C + G ++V V F G+L+++L + Y P LT + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 219 VARGLEYL 226
VA+G+E+L
Sbjct: 157 VAKGMEFL 164
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 89 GFKRSNVVSASGIPEYSYK-DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD 147
G + N + G + SY +++ + +T IG G+FG VYK + VAVK+L
Sbjct: 12 GTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVV 69
Query: 148 SKQGE--KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
E + F+ EV +L + H N++ +GY K +V + SL HL+ +
Sbjct: 70 DPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETK 128
Query: 206 PLTWNLRVHIALDVARGLEYLH 227
+ L + IA A+G++YLH
Sbjct: 129 FQMFQL-IDIARQTAQGMDYLH 149
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 120 IGQGAFGPVYKAQ------MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+GAFG V+ A+ VAVK L + K+FQ E LL L H ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 174 VGYCAEKGQHMLVYVFMSKGSL----------ASHLYD----ENYGPLTWNLRVHIALDV 219
G C + ++V+ +M G L A L D + G L + +HIA +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 220 ARGLEYL 226
A G+ YL
Sbjct: 143 ASGMVYL 149
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 19/138 (13%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVM 160
+ + N +G+GAFG V +A + +T TVAVK+L + E + +E+
Sbjct: 23 EFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELK 82
Query: 161 LLGRL-HHRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHL---------YDENYGP-LT 208
+L + HH N+VNL+G C + G ++V V F G+L+++L Y + Y LT
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 209 WNLRVHIALDVARGLEYL 226
+ + VA+G+E+L
Sbjct: 143 LEHLICYSFQVAKGMEFL 160
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V + +TGE VAVK L +S + + E+ +L L+H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
G C E G + L+ F+ GSL +L +N + ++ A+ + +G++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 142
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 120 IGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V + +TGE VAVK L +S + + E+ +L L+H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
G C E G + L+ F+ GSL +L +N + ++ A+ + +G++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYL 130
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETV----AVKVL-ATDSKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GETV A+K+L T + EF E +++
Sbjct: 35 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 94
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVA 220
+ H +LV L+G C LV M G L ++++ +N G L ++ + +A
Sbjct: 95 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QLLLNWCVQIA 150
Query: 221 RGLEYLHDGVSCH 233
+G+ YL + H
Sbjct: 151 KGMMYLEERRLVH 163
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETV----AVKVL-ATDSKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GETV A+K+L T + EF E +++
Sbjct: 12 LKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIM 71
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD--ENYGPLTWNLRVHIALDVA 220
+ H +LV L+G C LV M G L ++++ +N G L ++ + +A
Sbjct: 72 ASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS---QLLLNWCVQIA 127
Query: 221 RGLEYLHDGVSCH 233
+G+ YL + H
Sbjct: 128 KGMMYLEERRLVH 140
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ F+ GSL +L R+ HI L + +G
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE-------RIDHIKLLQYTSQICKG 129
Query: 223 LEYL 226
+EYL
Sbjct: 130 MEYL 133
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
++G+G FG K TGE + +K L ++ ++ F EV ++ L H N++ +G
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL 76
Query: 178 AEKGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLH 227
+ + + ++ G+L + D Y W+ RV A D+A G+ YLH
Sbjct: 77 YKDKRLNFITEYIKGGTLRGIIKSMDSQY---PWSQRVSFAKDIASGMAYLH 125
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG V++ + +TG K + T + + E+ ++ +LHH L+NL
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCHL 234
+K + +L+ F+S G L + E+Y ++ ++ GL+++H+ HL
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYK-MSEAEVINYMRQACEGLKHMHEHSIVHL 173
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRL-HHRNLVNL 173
L+G G +G VYK + + TG+ A+KV+ + E+E + E+ +L + HHRN+
Sbjct: 28 LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATY 86
Query: 174 VGYCAEKG------QHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
G +K Q LV F GS+ + + L +I ++ RGL +LH
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 228 DGVSCH 233
H
Sbjct: 147 QHKVIH 152
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V + VA+K L + +++ ++F +E +
Sbjct: 28 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 87
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ FM GSL S L +N G T V + +A
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 146
Query: 222 GLEYLHDGVSCH 233
G++YL D H
Sbjct: 147 GMKYLADMNYVH 158
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V + VA+K L + +++ ++F +E +
Sbjct: 2 KEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASI 61
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ FM GSL S L +N G T V + +A
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAA 120
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 121 GMKYLAD 127
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
L+G+G++G V K + TG VA+K + D K +K E+ LL +L H NLVNL+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 176 YCAEKGQHMLVYVFMS 191
C +K + LV+ F+
Sbjct: 92 VCKKKKRWYLVFEFVD 107
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 131
Query: 223 LEYL 226
+EYL
Sbjct: 132 MEYL 135
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 133
Query: 223 LEYL 226
+EYL
Sbjct: 134 MEYL 137
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 115 NFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-H 166
N +G+GAFG V +A + +T TVAVK+L + E + +E+ +L + H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 167 HRNLVNLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP-----------LTWNLR 212
H N+VNL+G C + G ++V V F G+L+++L + + P LT
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 213 VHIALDVARGLEYL 226
+ + VA+G+E+L
Sbjct: 151 ICYSFQVAKGMEFL 164
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 129
Query: 223 LEYL 226
+EYL
Sbjct: 130 MEYL 133
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 130
Query: 223 LEYL 226
+EYL
Sbjct: 131 MEYL 134
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 132
Query: 223 LEYL 226
+EYL
Sbjct: 133 MEYL 136
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 125
Query: 223 LEYL 226
+EYL
Sbjct: 126 MEYL 129
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 127
Query: 223 LEYL 226
+EYL
Sbjct: 128 MEYL 131
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYL 226
+EYL
Sbjct: 127 MEYL 130
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 157
Query: 223 LEYL 226
+EYL
Sbjct: 158 MEYL 161
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 124
Query: 223 LEYL 226
+EYL
Sbjct: 125 MEYL 128
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYL 226
+EYL
Sbjct: 127 MEYL 130
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 144
Query: 223 LEYL 226
+EYL
Sbjct: 145 MEYL 148
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 126
Query: 223 LEYL 226
+EYL
Sbjct: 127 MEYL 130
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRV-HIAL-----DVARG 222
V G C G+ L+ ++ GSL +L R+ HI L + +G
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-------RIDHIKLLQYTSQICKG 144
Query: 223 LEYL 226
+EYL
Sbjct: 145 MEYL 148
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + T TVAVK+L + E K TE+ +L + HH N+V
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYVFMSK-GSLASHL 199
NL+G C ++G ++V V K G+L+++L
Sbjct: 95 NLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 321
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 322 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 32/157 (20%)
Query: 103 EYSYK---DLQKATCNFTTLIGQGAFGPVYKAQM----STGET--VAVKVLATDSKQGEK 153
EY Y + + F ++G GAFG V A TG + VAVK+L + E+
Sbjct: 33 EYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSER 92
Query: 154 E-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY----------- 200
E +E+ ++ +L H N+VNL+G C G L++ + G L ++L
Sbjct: 93 EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEI 152
Query: 201 ----------DENYGPLTWNLRVHIALDVARGLEYLH 227
+E+ LT+ + A VA+G+E+L
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE 189
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 116 FTTLIGQGAFGPVY-----KAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNL 170
F +G+G FG V Q +TGE VAVK L +++ ++F+ E+ +L L H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 171 VNLVGYCAEKGQH--MLVYVFMSKGSLASHL 199
V G C G+ L+ ++ GSL +L
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKAQ T A KV+ T S++ +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ ++ F + G++ + + E PLT + + L YLHD H
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKAQ T A KV+ T S++ +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ ++ F + G++ + + E PLT + + L YLHD H
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKAQ T A KV+ T S++ +++ E+ +L H N+V L+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ ++ F + G++ + + E PLT + + L YLHD H
Sbjct: 105 YENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 238
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 239 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 192 FQVAKGMEFL 201
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 238
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 239 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 7 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 65
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 66 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 155 FQVAKGMEFL 164
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 157 FQVAKGMEFL 166
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 155 FQVAKGMEFL 164
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V V F G+L+++L + + P LT + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 155 FQVAKGMEFL 164
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGET-VAVK----VLA 145
K+S VV +P+ + L IG+G FG V+ ++ T VAVK L
Sbjct: 94 KKSGVVLHRAVPKDKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP 152
Query: 146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
D K +F E +L + H N+V L+G C +K +V + G + L E
Sbjct: 153 PDLK---AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA- 208
Query: 206 PLTWNLRVHIAL----DVARGLEYLHDGVSCH 233
LRV L D A G+EYL H
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCCIH 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ ++++ +MSKGSL L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIYIVIE-YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ ++++ +MSKGSL L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIYIVIE-YMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 108 DLQKATCNFTT-----------LIGQGAFGPVYKAQMSTGE-----TVAVKVLATDSKQG 151
D +A FTT +IG G FG VYK + T VA+K L +
Sbjct: 29 DPNQAVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK 88
Query: 152 EK-EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
++ +F E ++G+ H N++ L G ++ M++ +M G+L L +++ G +
Sbjct: 89 QRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD-GEFSVL 147
Query: 211 LRVHIALDVARGLEYLHDGVSCH 233
V + +A G++YL + H
Sbjct: 148 QLVGMLRGIAAGMKYLANMNYVH 170
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 63/152 (41%), Gaps = 18/152 (11%)
Query: 91 KRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGET-VAVK----VLA 145
K+S VV +P+ + L IG+G FG V+ ++ T VAVK L
Sbjct: 94 KKSGVVLHRAVPKDKWV-LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLP 152
Query: 146 TDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYG 205
D K +F E +L + H N+V L+G C +K +V + G + L E
Sbjct: 153 PDLK---AKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA- 208
Query: 206 PLTWNLRVHIAL----DVARGLEYLHDGVSCH 233
LRV L D A G+EYL H
Sbjct: 209 ----RLRVKTLLQMVGDAAAGMEYLESKCCIH 236
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG--EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G+G +G VYKA+ S G VA+K + D++ E+ LL LHH N+V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDEN 203
+ LV+ FM K + DEN
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDEN 112
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQG--EKEFQTEVMLLGRLHHRNLVNLVGYC 177
+G+G +G VYKA+ S G VA+K + D++ E+ LL LHH N+V+L+
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDEN 203
+ LV+ FM K + DEN
Sbjct: 89 HSERCLTLVFEFMEKD--LKKVLDEN 112
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 94 NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK 153
N S +G+ Y ++ F +G G FG V + VA+K++ S E
Sbjct: 7 NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
EF E ++ L H LV L G C ++ ++ +M+ G L ++L + + T L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-L 123
Query: 214 HIALDVARGLEYLHDGVSCH 233
+ DV +EYL H
Sbjct: 124 EMCKDVCEAMEYLESKQFLH 143
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 3 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 61
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 62 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 3/140 (2%)
Query: 94 NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEK 153
N S +G+ Y ++ F +G G FG V + VA+K++ S E
Sbjct: 7 NAPSTAGLG-YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSED 64
Query: 154 EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV 213
EF E ++ L H LV L G C ++ ++ +M+ G L ++L + + T L +
Sbjct: 65 EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-L 123
Query: 214 HIALDVARGLEYLHDGVSCH 233
+ DV +EYL H
Sbjct: 124 EMCKDVCEAMEYLESKQFLH 143
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 5 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 64 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 4 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 63 EKLVQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 180 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 238
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 239 EKLVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 90
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
K Q +V + SL HL+ + + IA ARG++YLH
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLH 137
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
NL+G C + G ++V V F G+L+++L
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 116
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
NL+G C + G ++V V F G+L+++L
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 118
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQM---STGE---TVAVKVLATDSKQG--EKEFQTE 158
K++ + F +G+ FG VYK + + GE VA+K L D +G +EF+ E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 79
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-----------DENY--- 204
ML RL H N+V L+G + +++ + S G L L D++
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 139
Query: 205 GPLTWNLRVHIALDVARGLEYL 226
L VH+ +A G+EYL
Sbjct: 140 SALEPPDFVHLVAQIAAGMEYL 161
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST- 78
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
K Q +V + SL HL+ + + IA ARG++YLH
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLH 125
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVL-ATDSKQGEKEFQTEVML 161
K++ + +IG G FG V ++ VA+K L A + + ++F +E +
Sbjct: 24 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 83
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ +M GSL + L +N G T V + +
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 142
Query: 222 GLEYLHDGVSCH 233
G++YL D + H
Sbjct: 143 GMKYLSDMSAVH 154
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQM---STGE---TVAVKVLATDSKQG--EKEFQTE 158
K++ + F +G+ FG VYK + + GE VA+K L D +G +EF+ E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL-KDKAEGPLREEFRHE 62
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLY-----------DENY--- 204
ML RL H N+V L+G + +++ + S G L L D++
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVK 122
Query: 205 GPLTWNLRVHIALDVARGLEYL 226
L VH+ +A G+EYL
Sbjct: 123 SALEPPDFVHLVAQIAAGMEYL 144
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
NL+G C + G ++V V F G+L+++L
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 123
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 120 IGQGAFGPVYKAQMS------TGETVAVKVLATD-SKQGEKEFQTEVMLLGRLHHRNLVN 172
IG+GAFG V++A+ VAVK+L + S + +FQ E L+ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL 199
L+G CA L++ +M+ G L L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 9/89 (10%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHL 199
NL+G C + G ++V V F G+L+++L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYL 125
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
++G+G +G VY + +S +A+K + + + E+ L L H+N+V +G
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 177 CAEKGQHMLVYVFMSK---GSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGVS 231
+E G + +FM + GSL++ L +GPL N + + GL+YLHD
Sbjct: 88 FSENG---FIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 232 CH 233
H
Sbjct: 144 VH 145
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 181 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRH 239
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 240 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A + VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------ASHL 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 149
Query: 200 YDENYGPLTWNLRVHIALDVARGLEYL 226
E+ PL +H + VA+G+ +L
Sbjct: 150 DKEDGRPLELRDLLHFSSQVAQGMAFL 176
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 119 LIGQGAFGPVYKAQMS----TGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G+G FG V + + T VAVK + D S++ +EF +E + H N++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 173 LVGYCAEKGQH-----MLVYVFMSKGSLASHLYDENY--GP--LTWNLRVHIALDVARGL 223
L+G C E M++ FM G L ++L GP + + +D+A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 224 EYL 226
EYL
Sbjct: 161 EYL 163
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV----YKAQMSTGETVAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V KA VA+K L +++ +EF +E +
Sbjct: 11 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M++ FM G+L S L N G T V + +A
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHDGVSCH 233
G+ YL + H
Sbjct: 130 GMRYLAEMSYVH 141
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A + VAVK+L + +
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSL--------ASHL 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 200 YDENYGPLTWNLRVHIALDVARGLEYL 226
E+ PL +H + VA+G+ +L
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFL 168
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV----YKAQMSTGETVAVKVLATD-SKQGEKEFQTEVML 161
K++ + +IG G FG V KA VA+K L +++ +EF +E +
Sbjct: 9 KEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASI 68
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M++ FM G+L S L N G T V + +A
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTVIQLVGMLRGIAS 127
Query: 222 GLEYLHDGVSCH 233
G+ YL + H
Sbjct: 128 GMRYLAEMSYVH 139
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 103 EYSYKDLQKATCNFTTLIGQ-GAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVM 160
E+ +DL +F +IG+ G FG VYKAQ T A KV+ T S++ +++ E+
Sbjct: 2 EHVTRDLNPE--DFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEID 59
Query: 161 LLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVA 220
+L H N+V L+ + ++ F + G++ + + E PLT + +
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVML-ELERPLTESQIQVVCKQTL 118
Query: 221 RGLEYLHDGVSCH 233
L YLHD H
Sbjct: 119 DALNYLHDNKIIH 131
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 118 TLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
++G+G +G VY + +S +A+K + + + E+ L L H+N+V +G
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 177 CAEKGQHMLVYVFMSK---GSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGVS 231
+E G + +FM + GSL++ L +GPL N + + GL+YLHD
Sbjct: 74 FSENG---FIKIFMEQVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 232 CH 233
H
Sbjct: 130 VH 131
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 87
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 146
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 147 GMKYLSD 153
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMS-TGE---TVAVKVLATD-SKQGEKEFQTEVML 161
K+++ + +IG G FG V ++ G+ VA+K L +++ ++F E +
Sbjct: 17 KEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASI 76
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M+V +M GSL + L +N G T V + ++
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTVIQLVGMLRGISA 135
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 136 GMKYLSD 142
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVL--ATDSKQGEKEFQ--TEVML-LGRLHHRNLVN 172
++G G FG V+K + GE++ + V + K G + FQ T+ ML +G L H ++V
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
L+G C LV ++ GSL H+ ++ G L L ++ + +A+G+ YL +
Sbjct: 98 LLGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 155
Query: 233 H 233
H
Sbjct: 156 H 156
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ F +G G FG V + VA+K++ S E EF E ++ L H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE 122
Query: 228 DGVSCH 233
H
Sbjct: 123 SKQFLH 128
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Query: 104 YSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLG 163
Y ++ F +G G FG V + VA+K++ S E EF E ++
Sbjct: 7 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMM 65
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
L H LV L G C ++ ++ +M+ G L ++L + + T L + + DV +
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAM 124
Query: 224 EYLHDGVSCH 233
EYL H
Sbjct: 125 EYLESKQFLH 134
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ F +G G FG V + VA+K++ S E EF E ++ L H
Sbjct: 4 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 63 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE 121
Query: 228 DGVSCH 233
H
Sbjct: 122 SKQFLH 127
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ ++ H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKGSL L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 130 GMKYLSD 136
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 23/130 (17%)
Query: 120 IGQGAFGPVYKA------QMSTGETVAVKVLATDSKQGE-KEFQTEVMLLGRL-HHRNLV 171
+G+GAFG V +A + +T TVAVK+L + E + +E+ +L + HH N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 172 NLVGYCAEKGQHMLVYV-FMSKGSLASHLYDE--NYGP------------LTWNLRVHIA 216
NL+G C + G ++V F G+L+++L + + P LT + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 217 LDVARGLEYL 226
VA+G+E+L
Sbjct: 146 FQVAKGMEFL 155
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 119 LIGQGAFGPVYK-AQMSTGETVAVKVL--ATDSKQGEKEFQ--TEVML-LGRLHHRNLVN 172
++G G FG V+K + GE++ + V + K G + FQ T+ ML +G L H ++V
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
L+G C LV ++ GSL H+ ++ G L L ++ + +A+G+ YL +
Sbjct: 80 LLGLCPGSSLQ-LVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMV 137
Query: 233 H 233
H
Sbjct: 138 H 138
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 2/119 (1%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G G FG V + VA+K++ S E EF E ++ L H LV L
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLY 65
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G C ++ ++ +M+ G L ++L + + T L + + DV +EYL H
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLESKQFLH 123
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ F +G G FG V + VA+K++ S E EF E ++ L H
Sbjct: 5 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L G C ++ ++ +M+ G L ++L + + T L + + DV +EYL
Sbjct: 64 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEAMEYLE 122
Query: 228 DGVSCH 233
H
Sbjct: 123 SKQFLH 128
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 38 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 97
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V +M GSL S L + T V + +A
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 156
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 157 GMKYLSD 163
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMST----GETVAVKVLATD-SKQGEKEFQTEVML 161
K+L + +IG G FG V ++ VA+K L +++ ++F E +
Sbjct: 38 KELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASI 97
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+V+L G M+V FM G+L + L + G T V + +A
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHD-GQFTVIQLVGMLRGIAA 156
Query: 222 GLEYLHD 228
G+ YL D
Sbjct: 157 GMRYLAD 163
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ + VA+K L + E F E ++ +L H
Sbjct: 5 EIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKH 63
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +M+KGSL L D L V +A VA G+ Y+
Sbjct: 64 DKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
++G+GAFG V KA+ + VA+K + ++S++ K F E+ L R++H N+V L G C
Sbjct: 16 VVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI---ALDVARGLEYLH 227
LV + GSL + L+ PL + H L ++G+ YLH
Sbjct: 73 NPV--CLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLH 120
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKA+ TG A KV+ T S++ +++ E+ +L H +V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G+ ++ F G++ + + + + G ++V + + L +LH H
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRIIH 140
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 105 SYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
YK+++ ++G+GAFG V KA+ + VA+K + ++S++ K F E+ L R
Sbjct: 6 DYKEIE-----VEEVVGRGAFGVVCKAKWRAKD-VAIKQIESESER--KAFIVELRQLSR 57
Query: 165 LHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHI---ALDVAR 221
++H N+V L G C LV + GSL + L+ PL + H L ++
Sbjct: 58 VNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQ 113
Query: 222 GLEYLH 227
G+ YLH
Sbjct: 114 GVAYLH 119
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+G GAFG VYKA+ TG A KV+ T S++ +++ E+ +L H +V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 179 EKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G+ ++ F G++ + + + + G ++V + + L +LH H
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRIIH 132
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVL-ATDSKQGEKEFQTEVML 161
K++ + +IG G FG V ++ VA+K L A + + ++F +E +
Sbjct: 3 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 62
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ +M GSL + L +N G T V + +
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 121
Query: 222 GLEYLHDGVSCH 233
G++YL D H
Sbjct: 122 GMKYLSDMSYVH 133
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGET----VAVKVL-ATDSKQGEKEFQTEVML 161
K++ + +IG G FG V ++ VA+K L A + + ++F +E +
Sbjct: 9 KEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASI 68
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N+++L G + M++ +M GSL + L +N G T V + +
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS 127
Query: 222 GLEYLHDGVSCH 233
G++YL D H
Sbjct: 128 GMKYLSDMSYVH 139
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKG L L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +M+KGSL L E L V ++ +A G+ Y+
Sbjct: 70 EKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 11 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +M+KGSL L E L V ++ +A G+ Y+
Sbjct: 70 EKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 60/132 (45%), Gaps = 6/132 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHDGVSCH 233
G++YL D + H
Sbjct: 159 GMKYLSDMGAVH 170
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
D+ LIG+G FG VY + + + + D++ K F+ EVM + H
Sbjct: 29 DIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRH 88
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
N+V +G C H+ + + KG + + L N IA ++ +G+ YLH
Sbjct: 89 ENVVLFMGACMSP-PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +GQG FG V+ + VA+K L + E F E ++ +L H
Sbjct: 14 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L +E+ + +V +MSKG L L E L V +A +A G+ Y+
Sbjct: 73 EKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
Q +V + SL HL+ + + IA ARG++YLH
Sbjct: 92 P-QLAIVTQWCEGSSLYHHLH-ASETKFEMKKLIDIARQTARGMDYLH 137
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 119 LIGQGAFGPVYKAQMSTGE----TVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G+G FG V +AQ+ + VAVK+L D + +EF E + H ++
Sbjct: 30 MLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAK 89
Query: 173 LVGYCAE---KGQ---HMLVYVFMSKGSLASHLYDENYGPLTWNLR----VHIALDVARG 222
LVG KG+ M++ FM G L + L G +NL V +D+A G
Sbjct: 90 LVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 223 LEYL 226
+EYL
Sbjct: 150 MEYL 153
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 70
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V M GSL S L + T V + +A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 129
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 130 GMKYLSD 136
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ + VAVK L + + F E L+ L H
Sbjct: 8 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 66
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L ++ ++ FM+KGSL L + G + + + +A G+ Y+
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 126
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATD-SKQGEKEFQTEVML 161
K+L + ++G G FG V ++ +VA+K L +++ ++F E +
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASI 99
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G + M+V M GSL S L + T V + +A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD-AQFTVIQLVGMLRGIAS 158
Query: 222 GLEYLHD 228
G++YL D
Sbjct: 159 GMKYLSD 165
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKG 181
C K
Sbjct: 86 CRTKA 90
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 177 CAEKG 181
C K
Sbjct: 85 CRTKA 89
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKG 181
C K
Sbjct: 86 CRTKA 90
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 22/153 (14%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A + VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-------- 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL 149
Query: 200 ---YDENYGP---LTWNLRVHIALDVARGLEYL 226
Y+ ++ P L+ +H + VA+G+ +L
Sbjct: 150 EYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL 182
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IGQG FG V+KA+ TG+ VA+K VL + K+G E+ +L L H N+VNL+
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 177 CAEKG 181
C K
Sbjct: 86 CRTKA 90
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 155
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 101
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 102 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 154
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 102
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 103 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 155
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 94
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 95 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 147
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 132
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 76
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 129
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 127
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 74
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 127
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 5/132 (3%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVML 161
PE+ ++ + T +G G FG V+ + VAVK L S + F E L
Sbjct: 2 PEW---EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANL 57
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+ +L H+ LV L ++ +++ +M GSL L + LT N + +A +A
Sbjct: 58 MKQLQHQRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 222 GLEYLHDGVSCH 233
G+ ++ + H
Sbjct: 117 GMAFIEERNYIH 128
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY-ST 79
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 132
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
NF T + + G ++K + G + VKVL S + ++F E L H N++
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 173 LVGYC-AEKGQH-MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
++G C + H L+ +M GSL + L++ + + V ALD+ARG+ +LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH 128
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKAQ + GET A+K + + K+ E T E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K + +LV+ + + L D G L L + G+ Y HD H
Sbjct: 69 IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 12/149 (8%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHM-LVYVFMSKGSLASHLYD--ENYGPLT 208
+E Q ++ +L H N+V L + G+ +VY+ + + +Y +Y
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 209 WNLRV-HIAL---DVARGLEYLHDGVSCH 233
L V ++ L + R L Y+H CH
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKAQ + GET A+K + + K+ E T E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K + +LV+ + + L D G L L + G+ Y HD H
Sbjct: 69 IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKAQ + GET A+K + + K+ E T E+ +L L H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
K + +LV+ + + L D G L L + G+ Y HD H
Sbjct: 69 IHTKKRLVLVFEHLDQD--LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L D Q ++ E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
G C ++G+ LV ++ GSL +L + G L A + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLH 134
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L D Q ++ E+ +L L+H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
G C ++G+ LV ++ GSL +L + G L A + G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLH 134
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 75
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 76 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 228 DGVSCH 233
+ H
Sbjct: 135 ERNYIH 140
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 33 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 84
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 85 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 141 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 179
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 18 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 69
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 70 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 125
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 126 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 164
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 63 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 228 DGVSCH 233
+ H
Sbjct: 122 ERNYIH 127
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 70 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 228 DGVSCH 233
+ H
Sbjct: 129 ERNYIH 134
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 35 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 86
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 87 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 142
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 143 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 181
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 8/126 (6%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGET----VAVKVLATD-SKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GE VA+KVL + S + KE E ++
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARG 222
+ + L+G C LV M G L H+ EN G L ++ + +A+G
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVR-ENRGRLGSQDLLNWCMQIAKG 131
Query: 223 LEYLHD 228
+ YL D
Sbjct: 132 MSYLED 137
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 37 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 88
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 89 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 144
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 145 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 183
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 7 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 58
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 59 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 114
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 115 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 153
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 76
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 77 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 228 DGVSCH 233
+ H
Sbjct: 136 ERNYIH 141
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGVSCH 233
+ H
Sbjct: 127 ERNYIH 132
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 33 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 84
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 85 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 141 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 179
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 11 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 62
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 63 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 119 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 157
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 68
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 69 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 228 DGVSCH 233
+ H
Sbjct: 128 ERNYIH 133
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 27 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 78
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 79 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 134
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 135 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 173
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGVSCH 233
+ H
Sbjct: 127 ERNYIH 132
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 73
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 74 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 228 DGVSCH 233
+ H
Sbjct: 133 ERNYIH 138
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 73
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 74 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 228 DGVSCH 233
+ H
Sbjct: 133 ERNYIH 138
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 12 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 63
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 64 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 119
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 120 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 158
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 77
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 78 QRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 228 DGVSCH 233
+ H
Sbjct: 137 ERNYIH 142
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 68 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 228 DGVSCH 233
+ H
Sbjct: 127 ERNYIH 132
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 11 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 62
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 63 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 119 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 157
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + T +G G FG V+ + VAVK L S + F E L+ +L H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQH 72
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV L ++ +++ +M GSL L + LT N + +A +A G+ ++
Sbjct: 73 QRLVRLYAVVTQEPIYIITE-YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 228 DGVSCH 233
+ H
Sbjct: 132 ERNYIH 137
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 88 EGFKRSNVVSASG-----IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAV 141
+G K + VV+ G E SY D T +IG G+FG VY+A++ +GE VA+
Sbjct: 78 DGSKVTTVVATPGQGPDRPQEVSYTD--------TKVIGNGSFGVVYQAKLCDSGELVAI 129
Query: 142 KVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKG 193
K + D + +E Q ++ +L H N+V L + G+ +L YV +
Sbjct: 130 KKVLQDKRFKNRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 185
Query: 194 SLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+A H +++++ + R L Y+H CH
Sbjct: 186 RVARHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICH 224
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ + VAVK L + + F E L+ L H
Sbjct: 9 EIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 67
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L + ++ +M+KGSL L + G + + + +A G+ Y+
Sbjct: 68 DKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 127
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 60/118 (50%), Gaps = 6/118 (5%)
Query: 120 IGQGAFGPVYKAQMST-GETVAVKVLATDSKQGE---KEFQTEVMLLGRLHHRNLVNLVG 175
+G G VY A+ + VA+K + ++ E K F+ EV +L H+N+V+++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
E + LV ++ +L+ ++ E++GPL+ + ++ + G+++ HD H
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMRIVH 134
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMS 191
+ + LV+ F+S
Sbjct: 74 IHTENKLYLVFEFLS 88
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMS 191
+ + LV+ F+S
Sbjct: 74 IHTENKLYLVFEFLS 88
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMS 191
+ + LV+ F+S
Sbjct: 72 IHTENKLYLVFEFLS 86
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFMS 191
+ + LV+ F+S
Sbjct: 73 IHTENKLYLVFEFLS 87
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 5 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 64
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 65 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 120
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 121 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 149
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 6 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 65
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 66 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 121
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 122 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 150
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A + VAVK+L + +
Sbjct: 15 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 75 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 126
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 61 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + D +
Sbjct: 2 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 61
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+E Q ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 62 NRELQ----IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 117
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 118 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 146
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + +F +G GAFG V +A + TVAVK+L +
Sbjct: 7 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 66
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E+E +E+ +L L +H N+VNL+G C G +++ + G L + L
Sbjct: 67 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + +F +G GAFG V +A + TVAVK+L +
Sbjct: 23 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 82
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E+E +E+ +L L +H N+VNL+G C G +++ + G L + L
Sbjct: 83 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 134
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + +F +G GAFG V +A + TVAVK+L +
Sbjct: 25 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 84
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E+E +E+ +L L +H N+VNL+G C G +++ + G L + L
Sbjct: 85 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 136
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
+L++ +G G FG V + VAVK++ S E EF E + +L H
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSH 62
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
LV G C+++ +V ++S G L ++L G L + + + DV G+ +L
Sbjct: 63 PKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFL 120
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A + VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + F +G GAFG V +A + VAVK+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
EKE +E+ ++ L H N+VNL+G C G +++ + G L + L
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + +F +G GAFG V +A + TVAVK+L +
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E+E +E+ +L L +H N+VNL+G C G +++ + G L + L
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA------QMSTGETVAVKVLATDSK 149
+ + +P + + +F +G GAFG V +A + TVAVK+L +
Sbjct: 30 IDPTQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH 89
Query: 150 QGEKE-FQTEVMLLGRL-HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E+E +E+ +L L +H N+VNL+G C G +++ + G L + L
Sbjct: 90 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV-YKAQMSTGE---TVAVKVL-ATDSKQGEKEFQTEVML 161
++++ + + +IG G G V Y G+ VA+K L A +++ ++F +E +
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M+V +M GSL + L + G T V + V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGA 162
Query: 222 GLEYLHD 228
G+ YL D
Sbjct: 163 GMRYLSD 169
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 116 FTTLIGQGAFGPVYKA---------QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
F +GQG F ++K Q+ E V +KVL + + F ++ +L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETE-VLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEY 225
H++LV G C +++LV F+ GSL ++L ++N + W L V A +A + +
Sbjct: 71 HKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--AKQLAAAMHF 128
Query: 226 LHDGVSCH 233
L + H
Sbjct: 129 LEENTLIH 136
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 2/114 (1%)
Query: 120 IGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAE 179
IG G+FG VYK + V + + + Q + F+ EV +L + H N++ +GY
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 180 KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
Q +V + SL HL+ L + IA A+G++YLH H
Sbjct: 76 P-QLAIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIH 127
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 107 KDLQKATCNFTTLIGQGAFGPV-YKAQMSTGE---TVAVKVL-ATDSKQGEKEFQTEVML 161
++++ + + +IG G G V Y G+ VA+K L A +++ ++F +E +
Sbjct: 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
+G+ H N++ L G M+V +M GSL + L + G T V + V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGA 162
Query: 222 GLEYLHD 228
G+ YL D
Sbjct: 163 GMRYLSD 169
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSK 149
V A I E + + +G+G FG V KA + TVAVK+L ++
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 150 QGE-KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E ++ +E +L +++H +++ L G C++ G +L+ + GSL L
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 11/138 (7%)
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE- 154
G P+Y + + ++G+G FG VY+ + GE VAVK D KE
Sbjct: 15 GSPQYG---IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK 71
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH 214
F +E +++ L H ++V L+G E+ +++ ++ G L H + N L V
Sbjct: 72 FMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELY-PYGELG-HYLERNKNSLKVLTLVL 129
Query: 215 IALDVARGLEYLHDGVSC 232
+L + + + YL + ++C
Sbjct: 130 YSLQICKAMAYL-ESINC 146
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSK 149
V A I E + + +G+G FG V KA + TVAVK+L ++
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 150 QGE-KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E ++ +E +L +++H +++ L G C++ G +L+ + GSL L
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 96 VSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM------STGETVAVKVLATDSK 149
V A I E + + +G+G FG V KA + TVAVK+L ++
Sbjct: 7 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS 66
Query: 150 QGE-KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
E ++ +E +L +++H +++ L G C++ G +L+ + GSL L
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 97 SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVL--ATDSKQG-E 152
++SG P+ + +G+G FG VY A+ VA+KVL + K+G E
Sbjct: 8 NSSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE 67
Query: 153 KEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
+ + E+ + LHH N++ L Y ++ + L+ + +G L L
Sbjct: 68 HQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 75 IHTENKLYLVFEFLHQ 90
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 7/130 (5%)
Query: 110 QKATCNFTTLIGQGAFGPVYKA----QMSTGETVAVKVLATDSKQGEKE-FQTEVMLLGR 164
++ + +IG+G FG VY Q A+K L+ ++ + E F E +L+
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 165 LHHRNLVNLVGY-CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGL 223
L+H N++ L+G +G ++ +M G L + P +L + L VARG+
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-ISFGLQVARGM 137
Query: 224 EYLHDGVSCH 233
EYL + H
Sbjct: 138 EYLAEQKFVH 147
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 71 IHTENKLYLVFEFLHQ 86
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 78 IHTENKLYLVFEFLHQ 93
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 74 IHTENKLYLVFEFL 87
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 73 IHTENKLYLVFEFL 86
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 74 IHTENKLYLVFEFLHQ 89
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 72 IHTENKLYLVFEFLHQ 87
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 74 IHTENKLYLVFEFLHQ 89
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 71 IHTENKLYLVFEFLHQ 86
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 73 IHTENKLYLVFEFL 86
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 72 IHTENKLYLVFEFL 85
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 71 IHTENKLYLVFEFLHQ 86
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 70 IHTENKLYLVFEFLHQ 85
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 92 RSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQ 150
R+ + + E +KD + + IG G+FG VY A+ + E VA+K ++ KQ
Sbjct: 34 RAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ 93
Query: 151 GEKEFQT---EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPL 207
+++Q EV L +L H N + G C + + + GS AS L + + PL
Sbjct: 94 SNEKWQDIIKEVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGS-ASDLLEVHKKPL 151
Query: 208 TWNLRVHIALDVARGLEYLHDGVSCH 233
+ +GL YLH H
Sbjct: 152 QEVEIAAVTHGALQGLAYLHSHNMIH 177
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 75 IHTENKLYLVFEFLHQ 90
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 70 IHTENKLYLVFEFLHQ 85
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L D+ Q ++ E+ +L L+H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
G C + G LV ++ GSL +L + G L A + G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLL---FAQQICEGMAYLH 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 72 IHTENKLYLVFEFL 85
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 73 IHTENKLYLVFEFL 86
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFM 190
+ + LV+ F+
Sbjct: 71 IHTENKLYLVFEFL 84
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 70 IHTENKLYLVFEFLHQ 85
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 78 IHTENKLYLVFEFLHQ 93
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLA----TDSKQG-EKEFQTEVMLLGRLHHRNLVN 172
+G+G F VYKA+ +T + VA+K + +++K G + E+ LL L H N++
Sbjct: 17 FLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
L+ K LV+ FM + L + D + +++ ++ + + +GLEYLH
Sbjct: 77 LLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLMTL-QGLEYLHQHWIL 134
Query: 233 H 233
H
Sbjct: 135 H 135
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 70 IHTENKLYLVFEFLHQ 85
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 72 IHTENKLYLVFEFLHQ 87
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 71 IHTENKLYLVFEFLHQ 86
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQT-EVMLLGRLHHRNLVNLVGYC 177
+G G + VYK +TG VA+K + DS++G E+ L+ L H N+V L
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI 72
Query: 178 AEKGQHMLVYVFMS---KGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ + LV+ FM K + S L NL + + +GL + H+ H
Sbjct: 73 HTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILH 131
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 13/128 (10%)
Query: 116 FTTLIGQGAFGPVYKA---------QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
F +GQG F ++K Q+ E V +KVL + + F ++ +L
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETE-VLLKVLDKAHRNYSESFFEAASMMSKLS 70
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL-YDENYGPLTWNLRVHIALDVARGLEY 225
H++LV G C +++LV F+ GSL ++L ++N + W L V A +A + +
Sbjct: 71 HKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEV--AKQLAWAMHF 128
Query: 226 LHDGVSCH 233
L + H
Sbjct: 129 LEENTLIH 136
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 119 LIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
++G+G FG VY+ + GE VAVK D KE F +E +++ L H ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
+G E+ +++ ++ G L H + N L V +L + + + YL + ++C
Sbjct: 79 IGIIEEEPTWIIMELY-PYGELG-HYLERNKNSLKVLTLVLYSLQICKAMAYL-ESINC 134
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 119 LIGQGAFGPVYKAQMST--GE--TVAVKVLATDSKQGEKE-FQTEVMLLGRLHHRNLVNL 173
++G+G FG VY+ + GE VAVK D KE F +E +++ L H ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSC 232
+G E+ +++ ++ G L H + N L V +L + + + YL + ++C
Sbjct: 75 IGIIEEEPTWIIMELY-PYGELG-HYLERNKNSLKVLTLVLYSLQICKAMAYL-ESINC 130
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 102 PEYSYKDLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQT--- 157
PE + DL++ IG G+FG VY A+ + E VA+K ++ KQ +++Q
Sbjct: 13 PEKLFSDLRE--------IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK 64
Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIAL 217
EV L +L H N + G C + + + GS AS L + + PL +
Sbjct: 65 EVRFLQKLRHPNTIQYRG-CYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTH 122
Query: 218 DVARGLEYLHDGVSCH 233
+GL YLH H
Sbjct: 123 GALQGLAYLHSHNMIH 138
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
++D+ K T + L+G+GA+ V A + G+ AVK++ + EV L +
Sbjct: 10 FEDMYKLT---SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 165 LH-HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLR--VHIALDVAR 221
++N++ L+ + + + LV+ + GS+ +H+ + + +N R + DVA
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRDVAA 122
Query: 222 GLEYLH 227
L++LH
Sbjct: 123 ALDFLH 128
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLH 227
K LV M+ G + H+Y DE+ + + GLE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L Q +Q E+ +L L+H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
G C ++G+ LV ++ GSL +L G L A + G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYLH 129
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 11/116 (9%)
Query: 120 IGQGAFGPVY-----KAQMSTGETVAVKVLATDS-KQGEKEFQTEVMLLGRLHHRNLVNL 173
+G+G FG V TGE VAVK L Q +Q E+ +L L+H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 174 VGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
G C ++G+ LV ++ GSL +L G L A + G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL---FAQQICEGMAYLH 128
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLH 227
K LV M+ G + H+Y DE+ + + GLE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 119 LIGQGAFGPVYKAQ-MSTGETVAVKVLATDS--KQGE-KEFQTEVMLLGRLHHRNLVNLV 174
L+G+G+F VY+A+ + TG VA+K++ + K G + Q EV + +L H +++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
Y + LV G + +L + P + N H + G+ YLH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLH 129
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLH 227
K LV M+ G + H+Y DE+ + + GLE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNLVNLV 174
++G+G FG V+ QM +TG+ A K L + K +Q E +L ++H R +V+L
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLY--DENYGPLTWNLRVHIALDVARGLEYLH 227
K LV M+ G + H+Y DE+ + + GLE+LH
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH 306
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+GAF V + ++ TG A K++ T S + ++ + E + L H N+V L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENY 204
+E+G H LV+ ++ G L + Y
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY 99
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 115 NFTTLIGQGAFGPVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVN 172
NF T + + G ++K + G + VKVL S + ++F E L H N++
Sbjct: 13 NFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 173 LVGYC-AEKGQH-MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
++G C + H L+ + GSL + L++ + + V ALD ARG +LH
Sbjct: 72 VLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH 128
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ TG+ A K++ T S + ++ + E + L H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENY 204
+E+G H LV+ ++ G L + Y
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY 99
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ TG+ A K++ T S + ++ + E + L H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENY 204
+E+G H LV+ ++ G L + Y
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREY 99
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + QG
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG 56
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+ E+ ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + QG
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG 56
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+ E+ ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQG 151
S V + P Q+ + T +IG G+FG VY+A++ +GE VA+K + QG
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVL----QG 56
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQH--------MLVYVFMSKGSLASHLYDEN 203
+ E+ ++ +L H N+V L + G+ +L YV + +A H
Sbjct: 57 KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK 116
Query: 204 YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+++++ + R L Y+H CH
Sbjct: 117 QTLPVIYVKLYM-YQLFRSLAYIHSFGICH 145
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 95 VVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYK------AQMSTGETVAVKVLATDS 148
+VSA+ + ++ + + +GQG+FG VY+ + VA+K + +
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 149 KQGEK-EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----E 202
E+ EF E ++ + ++V L+G ++ +++ M++G L S+L E
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 203 N---YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
N P + + + +A ++A G+ YL+ H
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH 154
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 17/124 (13%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 82 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 224 EYLH 227
YL+
Sbjct: 141 AYLN 144
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 95 VVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYK------AQMSTGETVAVKVLATDS 148
+VSA+ + ++ + + +GQG+FG VY+ + VA+K + +
Sbjct: 1 MVSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA 60
Query: 149 KQGEK-EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYD-----E 202
E+ EF E ++ + ++V L+G ++ +++ M++G L S+L E
Sbjct: 61 SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 203 N---YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
N P + + + +A ++A G+ YL+ H
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH 154
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGLE 224
L+G ++ ++V M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 225 YLH 227
YL+
Sbjct: 145 YLN 147
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 17/124 (13%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYV-FMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGL 223
L+G + KGQ LV + M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVS-KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 224 EYLH 227
YL+
Sbjct: 144 AYLN 147
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGLE 224
L+G ++ ++V M+ G L S+L + N G P T + +A ++A G+
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 225 YLH 227
YL+
Sbjct: 144 YLN 146
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 111 KATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ T F ++G GAF V+ Q TG+ A+K + + + E+ +L ++ H N
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN 67
Query: 170 LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
+V L + LV +S G L + + G T + V ++YLH+
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 230 VSCH 233
H
Sbjct: 126 GIVH 129
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGLE 224
L+G ++ ++V M+ G L S+L + N G P T + +A ++A G+
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 225 YLH 227
YL+
Sbjct: 146 YLN 148
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGLE 224
L+G ++ ++V M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 225 YLH 227
YL+
Sbjct: 145 YLN 147
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGLE 224
L+G ++ ++V M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 225 YLH 227
YL+
Sbjct: 145 YLN 147
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 120 IGQGAFGPVYKA---QMSTGET---VAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + GE VAVK + + E+ EF E ++ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY------DENYG--PLTWNLRVHIALDVARGLE 224
L+G ++ ++V M+ G L S+L + N G P T + +A ++A G+
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 225 YLH 227
YL+
Sbjct: 145 YLN 147
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+ + D++ +G E+ LL L+H N+V L+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 71 IHTENKLYLVFEFLHQ 86
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+ + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVYVFMSK 192
+ + LV+ F+ +
Sbjct: 70 IHTENKLYLVFEFLHQ 85
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 147 YLNANKFVH 155
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 116 FTTLIGQGAFGPVYKAQ-MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
F +G+G F V + + G A+K + +Q +E Q E + +H N++ LV
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 175 GYCAE----KGQHMLVYVFMSKGSLASHL--YDENYGPLTWNLRVHIALDVARGLEYLH 227
YC K + L+ F +G+L + + + LT + + + L + RGLE +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 138 YLNANKFVH 146
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 144 YLNANKFVH 152
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 177 CAEKGQHMLVY 187
+ + LV+
Sbjct: 74 IHTENKLYLVF 84
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSK-QGEKEFQT-EVMLLGRLHHRNLVNLVGY 176
IG+G +G VYKA+ TGE VA+K + D++ +G E+ LL L+H N+V L+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 177 CAEKGQHMLVY 187
+ + LV+
Sbjct: 70 IHTENKLYLVF 80
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 147 YLNANKFVH 155
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 5/127 (3%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH 166
D ++ NF IG+G+ G V A + TG+ VAVK + +Q + EV+++ H
Sbjct: 42 DPREYLANFIK-IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH 100
Query: 167 HRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
H N+V++ + +V F+ G+L + + + + L V R L YL
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYL 157
Query: 227 HDGVSCH 233
H+ H
Sbjct: 158 HNQGVIH 164
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 153 YLNANKFVH 161
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 140 YLNANKFVH 148
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 95 VVSASGIPEY---------SYKDLQKATCNFTTLIGQGAFGPVYK------AQMSTGETV 139
V+ AS PEY ++ + + +GQG+FG VY+ + V
Sbjct: 21 VLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV 80
Query: 140 AVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASH 198
A+K + + E+ EF E ++ + ++V L+G ++ +++ M++G L S+
Sbjct: 81 AIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSY 140
Query: 199 LYD-----EN---YGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
L EN P + + + +A ++A G+ YL+ H
Sbjct: 141 LRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH 183
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYD-----EN---YGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L EN P + + + +A ++A G+
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 140 YLNANKFVH 148
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 97 SASGIPEYSYKDLQKATCNFTTLIGQGAFGPV-YKAQMSTGETVAVKVLATDSKQGEKEF 155
+A+ E S K++ + + GQG FG V + STG +VA+K + D + +E
Sbjct: 10 AAAAADERSRKEMDRF--QVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL 67
Query: 156 QTEVMLLGRLHHRNLVNLVGY 176
Q + L LHH N+V L Y
Sbjct: 68 QI-MQDLAVLHHPNIVQLQSY 87
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ A + VAVK + S E F E ++ L H
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 242
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L ++ +++ FM+KGSL L + + + +A G+ ++
Sbjct: 243 DKLVKLHAVVTKEPIYIITE-FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 228 DGVSCH 233
H
Sbjct: 302 QRNYIH 307
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ A + VAVK + S E F E ++ L H
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 69
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L ++ +++ FM+KGSL L + + + +A G+ ++
Sbjct: 70 DKLVKLHAVVTKEPIYIITE-FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 228 DGVSCH 233
H
Sbjct: 129 QRNYIH 134
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV---NL 173
IG GA+G V A+ TG+ VA+K + A D K E+ +L H N++ ++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ G+ VYV + H + PLT + + RGL+Y+H H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIH 181
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV---NL 173
IG GA+G V A+ TG+ VA+K + A D K E+ +L H N++ ++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 174 VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ G+ VYV + H + PLT + + RGL+Y+H H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIH 182
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G++G V+K + TG+ VA+K + D +K E+ +L +L H NLVNL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 177 CAEKGQHMLVYVF 189
K + LV+ +
Sbjct: 71 FRRKRRLHLVFEY 83
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 2/126 (1%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHH 167
++ + + +G G FG V+ A + VAVK + S E F E ++ L H
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQH 236
Query: 168 RNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
LV L ++ +++ FM+KGSL L + + + +A G+ ++
Sbjct: 237 DKLVKLHAVVTKEPIYIITE-FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 228 DGVSCH 233
H
Sbjct: 296 QRNYIH 301
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG VYK T E VA+K++ +++ ++ Q E+ +L + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERK 137
Query: 232 CH 233
H
Sbjct: 138 IH 139
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ +KG LV + G L + R I V G+ Y+H H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKIVH 155
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GE V + V + S + KE E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIAL 217
+ + ++ L+G C L+ M G L ++ + +N G L W +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 218 DVARGLEYLHDGVSCH 233
+A+G+ YL D H
Sbjct: 127 QIAKGMNYLEDRRLVH 142
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ +KG LV + G L + R I V G+ Y+H H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKIVH 149
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 228 DGVSCH 233
D H
Sbjct: 139 DRRLVH 144
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GE V + V + S + KE E ++
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 72
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIAL 217
+ + ++ L+G C L+ M G L ++ + +N G L W +
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 125
Query: 218 DVARGLEYLHDGVSCH 233
+A+G+ YL D H
Sbjct: 126 QIAKGMNYLEDRRLVH 141
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GE V + V + S + KE E ++
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 73
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIAL 217
+ + ++ L+G C L+ M G L ++ + +N G L W +
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CV 126
Query: 218 DVARGLEYLHDGVSCH 233
+A+G+ YL D H
Sbjct: 127 QIAKGMNYLEDRRLVH 142
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY--------DENYGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L + P + + + +A ++A G+
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 153 YLNANKFVH 161
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 85
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 86 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 138
Query: 228 DGVSCH 233
D H
Sbjct: 139 DRRLVH 144
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 170 LVNL--VGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+V V Y + + LV ++ G L L + L + + + + +G+EYL
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYL 127
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 88 EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLAT 146
E ++ ++ + G P+ Y +K IGQGA G VY A ++TG+ VA++ +
Sbjct: 5 EILEKLRIIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NY 204
+ ++ E++++ + N+VN + + +V +++ GSL + + +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G + R + + LE+LH H
Sbjct: 117 GQIAAVCR-----ECLQALEFLHSNQVIH 140
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ +KG LV + G L + R I V G+ Y+H H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKIVH 173
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGVSCH 233
D H
Sbjct: 137 DRRLVH 142
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ +KG LV + G L + R I V G+ Y+H H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKIVH 172
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 120 IGQGAFGPVYK------AQMSTGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVN 172
+GQG+FG VY+ + VA+K + + E+ EF E ++ + ++V
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLY--------DENYGPLTWNLRVHIALDVARGLE 224
L+G ++ +++ M++G L S+L + P + + + +A ++A G+
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 225 YLHDGVSCH 233
YL+ H
Sbjct: 143 YLNANKFVH 151
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGVSCH 233
D H
Sbjct: 138 DRRLVH 143
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 82
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 83 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 135
Query: 228 DGVSCH 233
D H
Sbjct: 136 DRRLVH 141
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGVSCH 233
D H
Sbjct: 135 DRRLVH 140
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGVSCH 233
D H
Sbjct: 137 DRRLVH 142
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 56 VLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCR 115
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 116 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 168
Query: 228 DGVSCH 233
D H
Sbjct: 169 DRRLVH 174
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGVSCH 233
D H
Sbjct: 135 DRRLVH 140
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ G+ A K++ T S + ++ + E + L H N+V L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENY 204
+E+G H L++ ++ G L + Y
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREY 117
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 228 DGVSCH 233
D H
Sbjct: 142 DRRLVH 147
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 109 LQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLL 162
L++ ++G GAFG VYK + GE V + V + S + KE E ++
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIAL 217
+ + ++ L+G C L+ M G L ++ + +N G L W +
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CV 124
Query: 218 DVARGLEYLHDGVSCH 233
+A+G+ YL D H
Sbjct: 125 QIAKGMNYLEDRRLVH 140
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 83
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 84 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 136
Query: 228 DGVSCH 233
D H
Sbjct: 137 DRRLVH 142
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGVSCH 233
D H
Sbjct: 138 DRRLVH 143
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 88
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 89 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 141
Query: 228 DGVSCH 233
D H
Sbjct: 142 DRRLVH 147
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGVSCH 233
D H
Sbjct: 135 DRRLVH 140
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 21/126 (16%)
Query: 119 LIGQGAFGPVYKAQMST-GETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG-- 175
LIG G FG V+KA+ G+T +K + ++++ E+ EV L +L H N+V+ G
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVHYNGCW 73
Query: 176 ----YCAE---------KGQHMLVYV-FMSKGSLASHLYDENYGPLTWNLRVHIALDVAR 221
Y E K + + + + F KG+L + L L + + + +
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITK 133
Query: 222 GLEYLH 227
G++Y+H
Sbjct: 134 GVDYIH 139
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 87
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 88 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 140
Query: 228 DGVSCH 233
D H
Sbjct: 141 DRRLVH 146
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 91
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 92 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 144
Query: 228 DGVSCH 233
D H
Sbjct: 145 DRRLVH 150
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 90 FKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDS 148
K+ + S + PE + L+K +G+G++G VYKA TG+ VA+K + +S
Sbjct: 15 LKKLDEDSLTKQPEEVFDVLEK--------LGEGSYGSVYKAIHKETGQIVAIKQVPVES 66
Query: 149 KQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLT 208
+E E+ ++ + ++V G + +V + GS++ + N LT
Sbjct: 67 DL--QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LT 123
Query: 209 WNLRVHIALDVARGLEYLH 227
+ I +GLEYLH
Sbjct: 124 EDEIATILQSTLKGLEYLH 142
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 81
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 82 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 134
Query: 228 DGVSCH 233
D H
Sbjct: 135 DRRLVH 140
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGVSCH 233
D H
Sbjct: 138 DRRLVH 143
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 76 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 128
Query: 228 DGVSCH 233
D H
Sbjct: 129 DRRLVH 134
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 84
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 85 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 137
Query: 228 DGVSCH 233
D H
Sbjct: 138 DRRLVH 143
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 106
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A+G+ YL
Sbjct: 107 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE 159
Query: 228 DGVSCH 233
D H
Sbjct: 160 DRRLVH 165
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G +G V+KA+ T E VA+K V D +G E+ LL L H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV+ F + +D G L + + +GL + H
Sbjct: 70 LHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVK-VLATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G +G V+KA+ T E VA+K V D +G E+ LL L H+N+V L
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ LV+ F + +D G L + + +GL + H
Sbjct: 70 LHSDKKLTLVFEFCDQD--LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLA---TDSKQGEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G+FG V + TG+ AVKV++ K ++ EV LL +L H N+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHL 199
+ +KG LV + G L +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEI 117
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 170 LVNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+V G G+ LV ++ G L L + L + + + + +G+EYL
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYL 131
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 170 LVNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+V G G+ LV ++ G L L + L + + + + +G+EYL
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYL 143
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 115 NFTTLIGQGAFGPVYKAQM-----STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRN 169
+ + +G+G FG V + +TG VAVK L +++FQ E+ +L LH
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 170 LVNLVGYCAEKGQH--MLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
+V G G+ LV ++ G L L + L + + + + +G+EYL
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL-QRHRARLDASRLLLYSSQICKGMEYL 130
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG--EKEFQTEVMLLGRLHHRNLVNL 173
T +G+G +G VYKA T ETVA+K + + ++ EV LL L HRN++ L
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTE--VMLLGRLHHRNLVNLV-- 174
LIG+G +G VYK + VAVKV + ++Q F E + + + H N+ +
Sbjct: 20 LIGRGRYGAVYKGSLDE-RPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVG 75
Query: 175 --GYCAE-KGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
A+ + +++LV + GSL +L + W +A V RGL YLH
Sbjct: 76 DERVTADGRMEYLLVMEYYPNGSLXKYL---SLHTSDWVSSCRLAHSVTRGLAYLH 128
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCA 178
+IG G+FG V++A++ + VA+K + D + +E Q ++ + H N+V+L +
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQ----IMRIVKHPNVVDLKAFFY 102
Query: 179 EKG 181
G
Sbjct: 103 SNG 105
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 18/126 (14%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVN 172
++G GAFG VYK + GE V + V + S + KE E ++ + + ++
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCR 78
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHL--YDENYGP---LTWNLRVHIALDVARGLEYLH 227
L+G C L+ M G L ++ + +N G L W + +A G+ YL
Sbjct: 79 LLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLE 131
Query: 228 DGVSCH 233
D H
Sbjct: 132 DRRLVH 137
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + +G + L
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL 104
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + +G + L
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL 104
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 71
Query: 176 YCAEKGQHMLVYVFMSKGSL 195
E+ H LV+ ++ G L
Sbjct: 72 SIQEESFHYLVFDLVTGGEL 91
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 176 YCAEKGQHMLVYVFMSKGSL 195
E+ H LV+ ++ G L
Sbjct: 73 SIQEESFHYLVFDLVTGGEL 92
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 72
Query: 176 YCAEKGQHMLVYVFMSKGSL 195
E+ H LV+ ++ G L
Sbjct: 73 SIQEESFHYLVFDLVTGGEL 92
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 88 EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLAT 146
E ++ + + G P+ Y +K IGQGA G VY A ++TG+ VA++ +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NY 204
+ ++ E++++ + N+VN + + +V +++ GSL + + +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G + R + + LE+LH H
Sbjct: 116 GQIAAVCR-----ECLQALEFLHSNQVIH 139
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATDSKQGEKEFQT---EVMLLGRLHHRNLVNLVG 175
+G+GAF V + +TG A K++ T K ++FQ E + +L H N+V L
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINT-KKLSARDFQKLEREARICRKLQHPNIVRLHD 95
Query: 176 YCAEKGQHMLVYVFMSKGSL 195
E+ H LV+ ++ G L
Sbjct: 96 SIQEESFHYLVFDLVTGGEL 115
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 88 EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLAT 146
E ++ + + G P+ Y +K IGQGA G VY A ++TG+ VA++ +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NY 204
+ ++ E++++ + N+VN + + +V +++ GSL + + +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G + R + + LE+LH H
Sbjct: 116 GQIAAVCR-----ECLQALEFLHSNQVIH 139
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 88 EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLAT 146
E ++ + + G P+ Y +K IGQGA G VY A ++TG+ VA++ +
Sbjct: 4 EILEKLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNL 55
Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NY 204
+ ++ E++++ + N+VN + + +V +++ GSL + + +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G + R + + LE+LH H
Sbjct: 116 GQIAAVCR-----ECLQALEFLHSNQVIH 139
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 16/149 (10%)
Query: 88 EGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLAT 146
E ++ + + G P+ Y +K IGQGA G VY A ++TG+ VA++ +
Sbjct: 5 EILEKLRSIVSVGDPKKKYTRFEK--------IGQGASGTVYTAMDVATGQEVAIRQMNL 56
Query: 147 DSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDE--NY 204
+ ++ E++++ + N+VN + + +V +++ GSL + + +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 205 GPLTWNLRVHIALDVARGLEYLHDGVSCH 233
G + R + + LE+LH H
Sbjct: 117 GQIAAVCR-----ECLQALEFLHSNQVIH 140
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 109 LQKATC-------NFTTLIGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKE 154
LQ TC +G G+FG V + + +G+TV AVK L D + +
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH 214
F EV + L HRNL+ L G M V GSL L ++ G
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSR 125
Query: 215 IALDVARGLEYL 226
A+ VA G+ YL
Sbjct: 126 YAVQVAEGMGYL 137
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 16/132 (12%)
Query: 109 LQKATC-------NFTTLIGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKE 154
LQ TC +G G+FG V + + +G+TV AVK L D + +
Sbjct: 8 LQSLTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDD 67
Query: 155 FQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH 214
F EV + L HRNL+ L G M V GSL L ++ G
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSR 125
Query: 215 IALDVARGLEYL 226
A+ VA G+ YL
Sbjct: 126 YAVQVAEGMGYL 137
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + ++ G+ A ++ T S + ++ + E + L H N+V L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENY 204
+E+G H L++ ++ G L + Y
Sbjct: 79 ISEEGHHYLIFDLVTGGELFEDIVAREY 106
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYL 131
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 80 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYL 131
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 97 SASGIPEY----SYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG 151
+AS +P+Y S +D + +G+GA VY+ Q T + A+KVL +
Sbjct: 34 TASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK- 92
Query: 152 EKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENY 204
K +TE+ +L RL H N++ L + LV ++ G L + ++ Y
Sbjct: 93 -KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY 144
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYL 127
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYREL 99
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYL 127
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 9/114 (7%)
Query: 120 IGQGAFGPVYKAQMS--TGETV--AVKVLATD---SKQGEKEFQTEVMLLGRLHHRNLVN 172
+G G+FG V + + +G+TV AVK L D + +F EV + L HRNL+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYL 226
L G M V GSL L ++ G A+ VA G+ YL
Sbjct: 76 LYGVVLTPPMKM-VTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYL 127
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL 99
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL 100
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL 100
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL 104
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL 101
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL 99
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL 99
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL 100
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL 99
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL 104
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL 99
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 75 YFHDATRVYLILEYAPLGTVYREL 98
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL 99
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL 101
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 76 YFHDATRVYLILEYAPLGTVYREL 99
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL 125
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL 116
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 102 YFHDATRVYLILEYAPLGTVYREL 125
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL 104
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL 103
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 120 IGQGAFGPVYK-AQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+G+GAF V + + + + A K++ T S + ++ + E + L H N+V L
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYDENY 204
+E+G H LV+ ++ G L + Y
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREY 126
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 119 LIGQGAFGPVYKAQMSTG-ETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGY 176
+IG GA V A + E VA+K + + Q E E+ + + HH N+V+
Sbjct: 17 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 76
Query: 177 CAEKGQHMLVYVFMSKGS---LASHLY---DENYGPLTWNLRVHIALDVARGLEYLHDGV 230
K + LV +S GS + H+ + G L + I +V GLEYLH
Sbjct: 77 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 136
Query: 231 SCH 233
H
Sbjct: 137 QIH 139
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 13/143 (9%)
Query: 93 SNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQ 150
N+ S PE + L+K IG+G+FG V+K T + VA+K++ +++
Sbjct: 16 ENLYFQSMDPEELFTKLEK--------IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED 67
Query: 151 GEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWN 210
++ Q E+ +L + + G + + ++ ++ GS L GPL
Sbjct: 68 EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDET 124
Query: 211 LRVHIALDVARGLEYLHDGVSCH 233
I ++ +GL+YLH H
Sbjct: 125 QIATILREILKGLDYLHSEKKIH 147
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 232 CH 233
H
Sbjct: 126 IH 127
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 119 LIGQGAFGPVYKAQMSTG-ETVAVKVLATDSKQGE-KEFQTEVMLLGRLHHRNLVNLVGY 176
+IG GA V A + E VA+K + + Q E E+ + + HH N+V+
Sbjct: 22 VIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTS 81
Query: 177 CAEKGQHMLVYVFMSKGS---LASHLY---DENYGPLTWNLRVHIALDVARGLEYLHDGV 230
K + LV +S GS + H+ + G L + I +V GLEYLH
Sbjct: 82 FVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG 141
Query: 231 SCH 233
H
Sbjct: 142 QIH 144
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 232 CH 233
H
Sbjct: 141 IH 142
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 34.3 bits (77), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 7/122 (5%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
G + + ++ ++ GS L GPL I ++ +GL+YLH
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 232 CH 233
H
Sbjct: 126 IH 127
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
LIG G FG V+KA+ G+T ++ + ++++ E+ EV L +L H N+V+ G
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVHYNG 72
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.9 bits (76), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 110 QKATCNFTTLIGQGAFGPVYKAQMSTGETV-AVKVL---ATDSKQGEKEFQTEV-MLLGR 164
+ + +F +IG+G+FG V A+ E AVKVL A K+ EK +E +LL
Sbjct: 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKN 95
Query: 165 LHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLE 224
+ H LV L + V +++ G L HL E L R + A ++A L
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF-LEPRARFYAA-EIASALG 153
Query: 225 YLH 227
YLH
Sbjct: 154 YLH 156
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 10/145 (6%)
Query: 97 SASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKA--QMSTGETVAVKVLATDSKQGEKE 154
A G Y D + + +G+G FG V + G VA+K++ K E
Sbjct: 18 DAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAA 77
Query: 155 FQTEVMLLGRLHHRN------LVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLT 208
+ E+ +L +++ ++ V + + G HM + + S L D NY P
Sbjct: 78 -RLEINVLEKINEKDPDNKNLCVQMFDWFDYHG-HMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 209 WNLRVHIALDVARGLEYLHDGVSCH 233
+ H+A + + +++LHD H
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLTH 160
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVL--ATDSKQG-EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL A K G E + + EV + L H N++ L G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 73 YFHDATRVYLILEYAPLGTVYREL 96
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ---GEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G FG V Q+ +TG+ A K L + GE E +L +++ R +V+L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
K LV M+ G L H+Y V A ++ GLE LH
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 119 LIGQGAFGPVYKAQM-STGETVAVKVLATDSKQ---GEKEFQTEVMLLGRLHHRNLVNLV 174
++G+G FG V Q+ +TG+ A K L + GE E +L +++ R +V+L
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLA 250
Query: 175 GYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
K LV M+ G L H+Y V A ++ GLE LH
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH 303
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLG 163
DL IG+G F V A+ + TG+ VAVK++ +S +K F+ EV ++
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMK 61
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
L+H N+V L + LV + S G + +L
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 97
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
N ++G+G+FG V K + T + AVKV+ A+ + EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
L + +V + G L + + + I V G+ Y+H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMH 138
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQT--EVMLLGRL---HHRNLVNL 173
IG GA+G VYKA+ +G VA+K + + + T EV LL RL H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 174 VGYCA 178
+ CA
Sbjct: 72 MDVCA 76
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQT--EVMLLGRL---HHRNLVNL 173
IG GA+G VYKA+ +G VA+K + + + T EV LL RL H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 174 VGYCA 178
+ CA
Sbjct: 72 MDVCA 76
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 69/159 (43%), Gaps = 18/159 (11%)
Query: 41 NSSSRRAATLPIRANGVDSCSILSDSTVGPESPVKSGRNGNGKSMWLEGFKRS-NVVSAS 99
NS R + P RA + + + GP SP + + + E F+ + +V
Sbjct: 95 NSLRRDSPPPPARARQENG---MPEKPPGPRSPQREPQRVSH-----EQFRAALQLVVDP 146
Query: 100 GIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTE 158
G P SY D NF IG+G+ G V A + S+G+ VAVK + +Q + E
Sbjct: 147 GDPR-SYLD------NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNE 198
Query: 159 VMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS 197
V+++ H N+V + + +V F+ G+L
Sbjct: 199 VVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 237
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQT--EVMLLGRL---HHRNLVNL 173
IG GA+G VYKA+ +G VA+K + + + T EV LL RL H N+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 174 VGYCA 178
+ CA
Sbjct: 72 MDVCA 76
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Query: 115 NFTTLIGQGAFGPVYKAQ-MSTGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
N ++G+G+FG V K + T + AVKV+ A+ + EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
L + +V + G L + + + I V G+ Y+H
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMH 138
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 19/102 (18%)
Query: 120 IGQGAFGPVYKAQMSTGET-VAVKVL----------ATDSKQGEK---EFQTEVMLLGRL 165
+G GA+G V + G + A+KV+ + D+K EK E E+ LL L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 166 HHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS-----HLYDE 202
H N++ L +K LV F G L H +DE
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDE 145
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL + E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL 103
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 120 IGQGAFGPVYKAQMSTGETV-AVKVLATDSKQG---EKEFQTEVMLLGRLHHRNLVNLVG 175
+G+G FG VY A+ + + A+KVL + E + + EV + L H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
Y + + L+ + G++ L
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL 103
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAVK++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
+ L+H N+V L + LV + S G + +L
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAVK++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
+ L+H N+V L + LV + S G + +L
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAVK++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
+ L+H N+V L + LV + S G + +L
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
Query: 115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
N ++G+G+FG V K + T + AVKV+ A+ + EV LL +L H N++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHL 199
L + +V + G L +
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEI 112
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
+IG+GAF V + TG+ AVK++ + ++ + E + L H ++V
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGV 230
L+ + G +V+ FM L + ++ V H + L Y HD
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 231 SCH 233
H
Sbjct: 151 IIH 153
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINAMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 7/118 (5%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQ---TEVMLLGRLHHRNL 170
NF ++G+G+FG V A + T E A+K+L D + + + E +L L
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF 81
Query: 171 VNLVGYCAEKGQHM-LVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
+ + C + + V +++ G L H+ + G V A +++ GL +LH
Sbjct: 82 LTQLHSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLH 137
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAV+++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
+ L+H N+V L + LV + S G + +L
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 65
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRI 94
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 108 DLQKATCNFTTL--IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVML 161
D Q N+ L IG+G F V A+ + TG+ VAV+++ +S +K F+ EV +
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRI 66
Query: 162 LGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
+ L+H N+V L + LV + S G + +L
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGY 176
++G+GA V + T + AVK++ EV +L + HRN++ L+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHD 228
E+ + LV+ M GS+ SH++ ++ L ++ V DVA L++LH+
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHN 129
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.0 bits (71), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA+G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 67
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRI 96
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 6/113 (5%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLH-HRNLVNLVGY 176
++G+GA V + T + AVK++ EV +L + HRN++ L+ +
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 177 CAEKGQHMLVYVFMSKGSLASHLYD-ENYGPLTWNLRVHIALDVARGLEYLHD 228
E+ + LV+ M GS+ SH++ ++ L ++ V DVA L++LH+
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHN 129
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEK-EFQTEVMLLGRLHHRNLVNLVGYC 177
+G+G + VYK + T VA+K + + ++G EV LL L H N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVSCH 233
+ LV+ ++ K L +L D N+++ + + RGL Y H H
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHRQKVLH 123
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 119 LIGQGAFGPVYKAQMSTGETVAVKVLATDS-------KQGEKEFQTEVMLLGRLHHRNLV 171
L+G+G++G V ++ ET+ + + GE + E+ LL RL H+N++
Sbjct: 12 LLGEGSYGKV--KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVI 69
Query: 172 NLVG--YCAEKGQHMLV 186
LV Y EK + +V
Sbjct: 70 QLVDVLYNEEKQKMYMV 86
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 70
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 71 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 125
Query: 220 ARGLEYLHDGVSCH 233
+ L YL H
Sbjct: 126 STALAYLESKRFVH 139
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 9 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 68
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 69 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 123
Query: 220 ARGLEYLHDGVSCH 233
+ L YL H
Sbjct: 124 STALAYLESKRFVH 137
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYG 205
+ H ++V L+G E V++ M + G L S L Y
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS 107
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 8/123 (6%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
+IG+G F V + TG+ AVK++ + ++ + E + L H ++V
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGV 230
L+ + G +V+ FM L + ++ V H + L Y HD
Sbjct: 93 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 152
Query: 231 SCH 233
H
Sbjct: 153 IIH 155
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 63 LSDSTVGPESPVKSGRNGNGKSMWLEGFKRS-NVVSASGIPEYSYKDLQKATCNFTTLIG 121
+ + GP SP + + + E F+ + +V G P SY D NF IG
Sbjct: 37 MPEKPPGPRSPQREPQRVSH-----EQFRAALQLVVDPGDPR-SYLD------NFIK-IG 83
Query: 122 QGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEK 180
+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 84 EGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG 143
Query: 181 GQHMLVYVFMSKGSLAS 197
+ +V F+ G+L
Sbjct: 144 DELWVVMEFLEGGALTD 160
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 16/80 (20%)
Query: 75 KSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS 134
++GR + K E F +++ D+ K IGQG FG +Y A M+
Sbjct: 8 QAGRQSSAKRHLAEQFAVGEIIT----------DMAKKEWKVGLPIGQGGFGCIYLADMN 57
Query: 135 TGETV------AVKVLATDS 148
+ E+V VKV +D+
Sbjct: 58 SSESVGSDAPCVVKVEPSDN 77
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 12/105 (11%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 8 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 67
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENY 204
+ H ++V L+G E V++ M + G L S L Y
Sbjct: 68 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKY 108
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 13/134 (9%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 34 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 93
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYGPLTWNLRVHIALDV 219
+ H ++V L+G E V++ M + G L S L Y L + A +
Sbjct: 94 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQL 148
Query: 220 ARGLEYLHDGVSCH 233
+ L YL H
Sbjct: 149 STALAYLESKRFVH 162
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEKE-FQTEVMLL 162
++Q+ IG+G FG V++ + E VA+K + +E F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYG 205
+ H ++V L+G E V++ M + G L S L Y
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS 107
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 16/80 (20%)
Query: 75 KSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS 134
++GR + K E F +++ D+ A IGQG FG +Y A M+
Sbjct: 8 QAGRQSSAKRHLAEQFAVGEIIT----------DMAAAAWKVGLPIGQGGFGCIYLADMN 57
Query: 135 TGETV------AVKVLATDS 148
+ E+V VKV +D+
Sbjct: 58 SSESVGSDAPCVVKVEPSDN 77
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGETVAVKVLATDSKQG-----EKEFQTEVMLL 162
++Q+ IG+G FG V++ + E A+ V K ++F E + +
Sbjct: 3 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFM---SKGSLASHLYDENYG 205
+ H ++V L+G E V++ M + G L S L Y
Sbjct: 63 RQFDHPHIVKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS 104
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 16/80 (20%)
Query: 75 KSGRNGNGKSMWLEGFKRSNVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMS 134
++GR + K E F +++ D+ K IGQG FG +Y A M+
Sbjct: 8 QAGRQSSAKRHLAEQFAVGEIIT----------DMAKKEWKVGLPIGQGGFGCIYLADMN 57
Query: 135 TGETV------AVKVLATDS 148
+ E+V VKV +D+
Sbjct: 58 SSESVGSDAPCVVKVEPSDN 77
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 8/123 (6%)
Query: 119 LIGQGAFGPVYKA-QMSTGETVAVKVL-----ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
+IG+G F V + TG+ AVK++ + ++ + E + L H ++V
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRV--HIALDVARGLEYLHDGV 230
L+ + G +V+ FM L + ++ V H + L Y HD
Sbjct: 91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN 150
Query: 231 SCH 233
H
Sbjct: 151 IIH 153
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Query: 116 FTTL--IGQGAFGPVYKA-QMSTGETVAVKVL-ATDSKQGEKEFQTEVMLLGRLHHRNLV 171
FT L IG+G+FG V+K T + VA+K++ +++ ++ Q E+ +L + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 172 NLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLHDGVS 231
G + + ++ ++ GS L GP + ++ +GL+YLH
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLL---RAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 232 CH 233
H
Sbjct: 142 IH 143
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 120 IGQGAFGPVYKA-QMSTGETVAVKVLATD-----SKQGEKEFQTEVMLLGRLHHRNLVNL 173
IGQG++G V A + T A+K++ + + + + +TEV L+ +LHH N+ L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 82 GKSMWLEGFKRS-NVVSASGIPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQM-STGETV 139
G M E F+ + +V G P SY D NF IG+G+ G V A + S+G+ V
Sbjct: 1 GSHMSHEQFRAALQLVVDPGDPR-SYLD------NFIK-IGEGSTGIVCIATVRSSGKLV 52
Query: 140 AVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLAS 197
AVK + +Q + EV+++ H N+V + + +V F+ G+L
Sbjct: 53 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 110
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 108 DLQKATCNFTTLIGQGAFGPV----YKAQMSTGETVAVKVLATDSKQGEKE-FQTEVMLL 162
++Q+ IG+G FG V Y + + VA+K + +E F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 195
+ H ++V L+G E V++ M +L
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTL 94
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 158 EVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVF--MSKGSLASHLYDENYGPLTWNLRVHI 215
E+ +L +L H N+V LV + + L VF +++G + PL+ +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---PTLKPLSEDQARFY 142
Query: 216 ALDVARGLEYLH 227
D+ +G+EYLH
Sbjct: 143 FQDLIKGIEYLH 154
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 108 DLQKATCNFTTLIGQGAFGPV----YKAQMSTGETVAVKVLATDSKQGEKE-FQTEVMLL 162
++Q+ IG+G FG V Y + + VA+K + +E F E + +
Sbjct: 6 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTM 65
Query: 163 GRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 195
+ H ++V L+G E V++ M +L
Sbjct: 66 RQFDHPHIVKLIGVITENP----VWIIMELCTL 94
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
NF IG+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 33 NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 91
Query: 174 VGYCAEKGQHMLVYVFMSKGSLAS 197
+ +V F+ G+L
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTD 115
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEKE-F 155
+P ++Q+ IG+G FG V++ + E VA+K + +E F
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 156 QTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 195
E + + + H ++V L+G E V++ M +L
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTL 474
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
NF IG+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 35 NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 93
Query: 174 VGYCAEKGQHMLVYVFMSKGSLAS 197
+ +V F+ G+L
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTD 117
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 115 NFTTLIGQGAFGPVYKAQM-STGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNL 173
NF IG+G+ G V A + S+G+ VAVK + +Q + EV+++ H N+V +
Sbjct: 24 NFIK-IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEM 82
Query: 174 VGYCAEKGQHMLVYVFMSKGSLAS 197
+ +V F+ G+L
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTD 106
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 101 IPEYSYKDLQKATCNFTTLIGQGAFGPVYKAQMSTGE----TVAVKVLATDSKQGEKE-F 155
+P ++Q+ IG+G FG V++ + E VA+K + +E F
Sbjct: 379 MPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF 438
Query: 156 QTEVMLLGRLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSL 195
E + + + H ++V L+G E V++ M +L
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVITENP----VWIIMELCTL 474
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 120 IGQGAFGPVYKAQ-MSTGETVAVKVL---ATDSKQGEKEFQTEVMLLGRLHHRNLVNLVG 175
IG+G F V A+ + TG VAVK++ + +K F+ EV ++ L+H N+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFE 81
Query: 176 YCAEKGQHMLVYVFMSKGSLASHL 199
+ LV + S G + +L
Sbjct: 82 VIETEKTLYLVMEYASGGEVFDYL 105
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 120 IGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQT-----EVMLLGRL---HHRNL 170
IG GA+G VYKA+ +G VA+K + + G EV LL RL H N+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 171 VNLVGYCA 178
V L+ CA
Sbjct: 77 VRLMDVCA 84
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 115 NFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQG---EKEFQTEVMLLGRLHHRNL 170
+ +G+GA G V A T E VAVK++ D K+ + + E+ + L+H N+
Sbjct: 9 DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV--DMKRAVDCPENIKKEICINKMLNHENV 66
Query: 171 VNLVGYCAEKGQHMLVYVFMSKGSLASHL 199
V G+ E L + S G L +
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRI 95
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 119 LIGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
++GQGAFG V KA+ + + K+ T+ K +EVMLL L+H+ +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLNHQYVVRYYAA 70
Query: 177 CAEK 180
E+
Sbjct: 71 WLER 74
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 119 LIGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
++GQGAFG V KA+ + + K+ T+ K +EVMLL L+H+ +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVMLLASLNHQYVVRYYAA 70
Query: 177 CAEK 180
E+
Sbjct: 71 WLER 74
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 113 TCNFTTL--IGQGAFGPVYK-AQMSTGETVAVK------VLATDSKQGEKEFQTEVMLLG 163
T F L IG G FG V+K + G A+K + D + +E +LG
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG 66
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA---LDVA 220
+ H ++V AE ++ + + GSLA + ENY +++ + L V
Sbjct: 67 Q--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 123
Query: 221 RGLEYLHDGVSCHL 234
RGL Y+H H+
Sbjct: 124 RGLRYIHSMSLVHM 137
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 113 TCNFTTL--IGQGAFGPVYK-AQMSTGETVAVK------VLATDSKQGEKEFQTEVMLLG 163
T F L IG G FG V+K + G A+K + D + +E +LG
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG 68
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA---LDVA 220
+ H ++V AE ++ + + GSLA + ENY +++ + L V
Sbjct: 69 Q--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 125
Query: 221 RGLEYLHDGVSCHL 234
RGL Y+H H+
Sbjct: 126 RGLRYIHSMSLVHM 139
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 113 TCNFTTL--IGQGAFGPVYK-AQMSTGETVAVK------VLATDSKQGEKEFQTEVMLLG 163
T F L IG G FG V+K + G A+K + D + +E +LG
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG 64
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA---LDVA 220
+ H ++V AE ++ + + GSLA + ENY +++ + L V
Sbjct: 65 Q--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 121
Query: 221 RGLEYLHDGVSCHL 234
RGL Y+H H+
Sbjct: 122 RGLRYIHSMSLVHM 135
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 16/134 (11%)
Query: 113 TCNFTTL--IGQGAFGPVYK-AQMSTGETVAVK------VLATDSKQGEKEFQTEVMLLG 163
T F L IG G FG V+K + G A+K + D + +E +LG
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHA-VLG 66
Query: 164 RLHHRNLVNLVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIA---LDVA 220
+ H ++V AE ++ + + GSLA + ENY +++ + L V
Sbjct: 67 Q--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQVG 123
Query: 221 RGLEYLHDGVSCHL 234
RGL Y+H H+
Sbjct: 124 RGLRYIHSMSLVHM 137
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+LIG+G+FG V KA E VA+K++ + K + Q EV LL L +++ + Y
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLL-ELMNKHDTEMKYY 117
Query: 177 CAEKGQHMLV--YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEYL 226
+H + ++ + L+ +LYD N+ ++ NL A + L +L
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 20/135 (14%)
Query: 108 DLQKATCNFTTLIGQGAFGPVYKAQMSTGE-TVAVKVLATDSKQGEKE-FQTEVMLLGRL 165
D + C +G+G FG V++A+ + A+K + +++ +E EV L +L
Sbjct: 6 DFEPIQC-----LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 60
Query: 166 HHRNLVNLVGYCAEKG-------QHMLVYVFMS-KGSLASHLYDENYGPLTWNLR----- 212
H +V EK VY+++ + +L D G T R
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 213 VHIALDVARGLEYLH 227
+HI L +A +E+LH
Sbjct: 121 LHIFLQIAEAVEFLH 135
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+LIG+G+FG V KA E VA+K++ + K + Q EV LL L +++ + Y
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLL-ELMNKHDTEMKYY 98
Query: 177 CAEKGQHMLV--YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEYL 226
+H + ++ + L+ +LYD N+ ++ NL A + L +L
Sbjct: 99 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 118 TLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
+LIG+G+FG V KA E VA+K++ + K + Q EV LL L +++ + Y
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLL-ELMNKHDTEMKYY 117
Query: 177 CAEKGQHMLV--YVFMSKGSLASHLYD----ENYGPLTWNLRVHIALDVARGLEYL 226
+H + ++ + L+ +LYD N+ ++ NL A + L +L
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
++GQG+FG V+ + +G + A+KVL AT + + E +L ++H +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
L +G+ L+ F+ G L + L E +++ ++A ++A L++LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF-TEEDVKFYLA-ELALALDHLH 143
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 11/121 (9%)
Query: 120 IGQGAFG-PVYKAQMSTGETVAVKVLATD--SKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
IG+G+FG + G +K + S + +E + EV +L + H N+V
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 177 CAEKGQHMLVYVFMSKGSLASH-------LYDENYGPLTWNLRVHIALDVARGLEYLHDG 229
E G +V + G L L+ E+ L W +++ +AL + LH
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED-QILDWFVQICLALKHVHDRKILHRD 150
Query: 230 V 230
+
Sbjct: 151 I 151
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 28.1 bits (61), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
++GQG+FG V+ + +G + A+KVL AT + + E +L ++H +V
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 90
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
L +G+ L+ F+ G L + L E +++ ++A ++A L++LH
Sbjct: 91 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA-ELALALDHLH 143
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 119 LIGQGAFGPVYKAQMSTG----ETVAVKVL--ATDSKQGEKEFQTEVMLLGRLHHRNLVN 172
++GQG+FG V+ + +G + A+KVL AT + + E +L ++H +V
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVK 91
Query: 173 LVGYCAEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVHIALDVARGLEYLH 227
L +G+ L+ F+ G L + L E +++ ++A ++A L++LH
Sbjct: 92 LHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFT-EEDVKFYLA-ELALALDHLH 144
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRL---HHRNLVN 172
IG+GA+G V+KA+ + G VA+K + + + T EV +L L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LVGYCA---EKGQHMLVYVFMSKGSLASHLYDENYGP-LTWNLRVHIALDVARGLEYLHD 228
L C + L VF + D+ P + + + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 229 GVSCH 233
H
Sbjct: 139 HRVVH 143
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 19/139 (13%)
Query: 106 YKDLQKATCNFTTLIGQGAFGPVYKA-QMSTGETVAVKVLATDSKQGEKEFQTEVMLLGR 164
Y DL+ C G G V+ A + VA+K + Q K E+ ++ R
Sbjct: 13 YMDLKPLGC--------GGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRR 64
Query: 165 LHHRNLVNLVGYCAEKGQHM---------LVYVFMSKGSLASHLYDE-NYGPLTWNLRVH 214
L H N+V + G + L V++ + + + L + GPL
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL 124
Query: 215 IALDVARGLEYLHDGVSCH 233
+ RGL+Y+H H
Sbjct: 125 FMYQLLRGLKYIHSANVLH 143
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD 147
NF ++G+G+FG V ++ T E AVK+L D
Sbjct: 344 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD 377
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 115 NFTTLIGQGAFGPVYKAQMS-TGETVAVKVLATD 147
NF ++G+G+FG V ++ T E AVK+L D
Sbjct: 23 NFLMVLGKGSFGKVMLSERKGTDELYAVKILKKD 56
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 11/119 (9%)
Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRL---HHRNLVN 172
IG+GA+G V+KA+ + G VA+K + + + T EV +L L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LVGYCA---EKGQHMLVYVFMSKGSLASHLYDENYGP-LTWNLRVHIALDVARGLEYLH 227
L C + L VF + D+ P + + + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH 137
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 120 IGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQT--EVMLLGRL---HHRNLVN 172
IG+GA+G V+KA+ + G VA+K + + + T EV +L L H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 173 LVGYCA---EKGQHMLVYVFMSKGSLASHLYDENYGP-LTWNLRVHIALDVARGLEYLHD 228
L C + L VF + D+ P + + + RGL++LH
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 229 GVSCH 233
H
Sbjct: 139 HRVVH 143
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L+ R +++LV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLA---LNERIMLSLVSTG 249
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 228 D 228
+
Sbjct: 310 N 310
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L+ R +++LV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLA---LNERIMLSLVSTG 249
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 228 D 228
+
Sbjct: 310 N 310
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L+ R +++LV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLA---LNERIMLSLVSTG 249
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 228 D 228
+
Sbjct: 310 N 310
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 119 LIGQGAFGPVYKAQMS-TGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYC 177
+IG+G FG VY + + TG+ A+K L K+ K Q E + L+ R +++LV
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCL---DKKRIKMKQGETLA---LNERIMLSLVSTG 248
Query: 178 AEKGQHMLVYVFMSKGSLASHLYDENYGPLTWNLRVH----------IALDVARGLEYLH 227
+ Y F + L+ L N G L ++L H A ++ GLE++H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 228 D 228
+
Sbjct: 309 N 309
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 119 LIGQGAFGPVYKAQ--MSTGETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGY 176
++GQGAFG V KA+ + + K+ T+ K +EV LL L+H+ +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS--TILSEVXLLASLNHQYVVRYYAA 70
Query: 177 CAEK 180
E+
Sbjct: 71 WLER 74
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,543,518
Number of Sequences: 62578
Number of extensions: 262781
Number of successful extensions: 1301
Number of sequences better than 100.0: 600
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 818
Number of HSP's gapped (non-prelim): 603
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)