Query 026631
Match_columns 235
No_of_seqs 228 out of 1643
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 10:33:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026631.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026631hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 99.8 5.8E-20 1.3E-24 172.0 6.4 60 171-234 4-63 (371)
2 KOG0713 Molecular chaperone (D 99.7 1.5E-18 3.2E-23 159.9 6.2 61 170-234 15-75 (336)
3 PRK14288 chaperone protein Dna 99.7 5.3E-17 1.2E-21 152.1 6.0 60 171-234 3-62 (369)
4 smart00271 DnaJ DnaJ molecular 99.7 2.6E-16 5.6E-21 109.8 7.5 60 171-233 1-60 (60)
5 PRK14296 chaperone protein Dna 99.6 2.2E-16 4.9E-21 148.1 6.2 59 171-234 4-62 (372)
6 PRK14279 chaperone protein Dna 99.6 3.6E-16 7.9E-21 147.6 7.0 60 171-234 9-68 (392)
7 cd06257 DnaJ DnaJ domain or J- 99.6 1.3E-15 2.7E-20 104.4 7.0 55 172-230 1-55 (55)
8 PRK14286 chaperone protein Dna 99.6 5.5E-16 1.2E-20 145.4 6.2 60 171-234 4-63 (372)
9 PF00226 DnaJ: DnaJ domain; I 99.6 9.5E-16 2.1E-20 108.7 4.6 59 172-233 1-59 (64)
10 PRK14285 chaperone protein Dna 99.6 1.6E-15 3.6E-20 141.9 7.0 60 171-234 3-62 (365)
11 KOG0712 Molecular chaperone (D 99.6 9.4E-16 2E-20 142.2 5.3 58 170-234 3-60 (337)
12 PRK14295 chaperone protein Dna 99.6 1.8E-15 4E-20 142.7 6.7 60 171-234 9-68 (389)
13 PRK14282 chaperone protein Dna 99.6 1.8E-15 3.9E-20 141.6 6.5 61 171-234 4-64 (369)
14 PRK14277 chaperone protein Dna 99.6 2.1E-15 4.6E-20 142.0 6.3 60 171-234 5-64 (386)
15 PRK14287 chaperone protein Dna 99.6 2.4E-15 5.1E-20 141.1 6.4 59 171-234 4-62 (371)
16 PRK14297 chaperone protein Dna 99.6 3E-15 6.6E-20 140.6 6.9 60 171-234 4-63 (380)
17 KOG0717 Molecular chaperone (D 99.6 2.4E-15 5.2E-20 143.4 5.9 64 168-234 5-68 (508)
18 PRK14301 chaperone protein Dna 99.6 3.3E-15 7.2E-20 140.2 6.7 60 171-234 4-63 (373)
19 KOG0716 Molecular chaperone (D 99.6 3.2E-15 7E-20 134.6 5.9 62 170-235 30-91 (279)
20 PRK14278 chaperone protein Dna 99.6 3.6E-15 7.8E-20 140.2 6.3 59 171-234 3-61 (378)
21 PRK14276 chaperone protein Dna 99.6 3.2E-15 7E-20 140.5 5.9 59 171-234 4-62 (380)
22 PRK14294 chaperone protein Dna 99.6 3.9E-15 8.4E-20 139.3 6.1 60 171-234 4-63 (366)
23 PRK14283 chaperone protein Dna 99.6 3.8E-15 8.3E-20 139.8 6.0 59 171-234 5-63 (378)
24 PRK14299 chaperone protein Dna 99.6 4E-15 8.6E-20 135.3 5.9 59 171-234 4-62 (291)
25 PTZ00037 DnaJ_C chaperone prot 99.6 2.6E-15 5.7E-20 143.2 4.9 56 171-234 28-83 (421)
26 PRK14298 chaperone protein Dna 99.6 4.1E-15 8.8E-20 139.8 6.0 59 171-234 5-63 (377)
27 PRK14284 chaperone protein Dna 99.6 4.4E-15 9.6E-20 140.0 6.3 59 172-234 2-60 (391)
28 PRK14281 chaperone protein Dna 99.5 5.3E-15 1.1E-19 139.9 6.4 60 171-234 3-62 (397)
29 PRK10767 chaperone protein Dna 99.5 5.9E-15 1.3E-19 138.1 6.6 60 171-234 4-63 (371)
30 PRK14291 chaperone protein Dna 99.5 5.4E-15 1.2E-19 139.1 5.9 59 171-234 3-61 (382)
31 PRK14280 chaperone protein Dna 99.5 6.2E-15 1.3E-19 138.4 6.0 59 171-234 4-62 (376)
32 PRK14292 chaperone protein Dna 99.5 1.7E-14 3.6E-19 135.1 6.9 60 170-234 1-60 (371)
33 KOG0691 Molecular chaperone (D 99.5 1.2E-14 2.7E-19 133.0 5.7 60 171-234 5-64 (296)
34 PRK14290 chaperone protein Dna 99.5 1.7E-14 3.6E-19 135.0 6.5 61 171-234 3-63 (365)
35 PRK14289 chaperone protein Dna 99.5 2.4E-14 5.1E-19 134.7 6.4 60 171-234 5-64 (386)
36 PRK10266 curved DNA-binding pr 99.5 2.1E-14 4.5E-19 131.4 5.8 59 171-234 4-62 (306)
37 KOG0718 Molecular chaperone (D 99.5 2E-14 4.4E-19 137.3 5.6 66 167-234 5-71 (546)
38 KOG0715 Molecular chaperone (D 99.5 2E-14 4.3E-19 131.1 5.3 58 172-234 44-101 (288)
39 PRK14300 chaperone protein Dna 99.5 3E-14 6.5E-19 133.6 5.8 59 171-234 3-61 (372)
40 COG2214 CbpA DnaJ-class molecu 99.5 7.2E-14 1.6E-18 115.7 6.1 63 169-234 4-66 (237)
41 PRK14293 chaperone protein Dna 99.5 5.8E-14 1.3E-18 131.7 5.7 59 171-234 3-61 (374)
42 KOG0719 Molecular chaperone (D 99.5 4.8E-14 1E-18 125.0 4.3 62 171-234 14-75 (264)
43 KOG0721 Molecular chaperone (D 99.4 2E-13 4.3E-18 119.9 5.8 62 169-234 97-158 (230)
44 PTZ00341 Ring-infected erythro 99.4 1.9E-13 4.2E-18 139.9 6.3 59 171-234 573-631 (1136)
45 PRK05014 hscB co-chaperone Hsc 99.4 8.3E-13 1.8E-17 112.2 7.3 63 172-234 2-67 (171)
46 PRK01356 hscB co-chaperone Hsc 99.4 7.1E-13 1.5E-17 112.3 5.7 65 170-234 1-66 (166)
47 PRK03578 hscB co-chaperone Hsc 99.3 4E-12 8.6E-17 108.7 7.3 64 171-234 6-72 (176)
48 PRK00294 hscB co-chaperone Hsc 99.3 4.2E-12 9.1E-17 108.4 7.1 64 171-234 4-70 (173)
49 PHA03102 Small T antigen; Revi 99.3 1.8E-12 3.9E-17 108.8 4.7 58 170-233 4-61 (153)
50 PRK09430 djlA Dna-J like membr 99.3 4.2E-12 9E-17 114.7 6.4 62 168-231 197-263 (267)
51 TIGR03835 termin_org_DnaJ term 99.2 7.2E-12 1.6E-16 126.0 6.1 59 171-234 2-60 (871)
52 KOG0624 dsRNA-activated protei 99.2 5.6E-12 1.2E-16 118.1 4.3 64 169-234 392-456 (504)
53 PTZ00100 DnaJ chaperone protei 99.2 1.2E-11 2.7E-16 99.4 5.4 52 170-229 64-115 (116)
54 KOG0714 Molecular chaperone (D 99.1 2.8E-11 6.1E-16 105.2 4.0 61 171-234 3-63 (306)
55 KOG0720 Molecular chaperone (D 99.1 1.4E-10 2.9E-15 111.1 4.9 60 170-234 234-293 (490)
56 PRK01773 hscB co-chaperone Hsc 99.0 3.5E-10 7.5E-15 96.6 6.6 65 170-234 1-68 (173)
57 KOG0550 Molecular chaperone (D 99.0 1.3E-10 2.9E-15 110.4 4.1 61 170-233 372-432 (486)
58 KOG0722 Molecular chaperone (D 99.0 2E-10 4.4E-15 103.5 3.5 63 166-233 28-90 (329)
59 COG5407 SEC63 Preprotein trans 99.0 2.4E-10 5.2E-15 109.6 3.3 64 169-234 96-162 (610)
60 PHA02624 large T antigen; Prov 99.0 4.9E-10 1.1E-14 111.3 4.9 58 170-233 10-67 (647)
61 TIGR00714 hscB Fe-S protein as 98.8 1.3E-08 2.8E-13 85.6 6.1 50 185-234 3-55 (157)
62 TIGR02349 DnaJ_bact chaperone 98.7 3.6E-08 7.8E-13 91.8 6.7 35 172-208 1-35 (354)
63 KOG1150 Predicted molecular ch 98.7 2.7E-08 5.9E-13 87.2 5.0 61 169-232 51-111 (250)
64 COG5269 ZUO1 Ribosome-associat 98.3 3.7E-07 8E-12 83.4 3.4 63 169-233 41-106 (379)
65 KOG1789 Endocytosis protein RM 98.3 9.5E-07 2.1E-11 92.0 5.6 56 170-230 1280-1337(2235)
66 KOG0568 Molecular chaperone (D 97.9 1.8E-05 3.9E-10 71.2 5.4 55 170-229 46-101 (342)
67 KOG0723 Molecular chaperone (D 97.7 6.8E-05 1.5E-09 59.8 5.4 53 172-232 57-109 (112)
68 COG1076 DjlA DnaJ-domain-conta 97.0 0.00057 1.2E-08 58.1 3.3 56 171-228 113-173 (174)
69 KOG3192 Mitochondrial J-type c 96.7 0.0016 3.6E-08 55.2 3.3 65 170-234 7-74 (168)
70 KOG0431 Auxilin-like protein a 96.6 0.0027 5.9E-08 61.8 5.0 45 185-229 400-449 (453)
71 COG1076 DjlA DnaJ-domain-conta 95.4 0.0055 1.2E-07 52.1 0.7 62 172-233 2-66 (174)
72 PF03656 Pam16: Pam16; InterP 90.7 0.61 1.3E-05 38.3 5.4 53 169-229 56-108 (127)
73 PF13446 RPT: A repeated domai 86.6 1.7 3.7E-05 30.5 4.8 29 169-199 3-31 (62)
74 PF14687 DUF4460: Domain of un 78.5 4.2 9E-05 32.6 4.6 47 186-232 7-55 (112)
75 COG2879 Uncharacterized small 40.0 49 0.0011 24.3 3.7 28 193-224 27-54 (65)
76 PF07709 SRR: Seven Residue Re 37.9 20 0.00043 18.4 1.0 13 217-229 2-14 (14)
77 PF12434 Malate_DH: Malate deh 31.7 51 0.0011 20.3 2.2 18 186-203 9-26 (28)
78 PHA03308 transcriptional regul 29.3 21 0.00045 37.7 0.4 16 16-31 876-891 (1463)
79 COG5552 Uncharacterized conser 22.7 3.1E+02 0.0068 20.9 5.6 32 174-207 6-37 (88)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=5.8e-20 Score=172.02 Aligned_cols=60 Identities=40% Similarity=0.552 Sum_probs=57.2
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. ++|+++|++|++||+||+||+|+
T Consensus 4 ~dyYeiLGV~k~A--s~~EIKkAYRkLA~kyHPD~n~g~--~~AeeKFKEI~eAYEVLsD~eKR 63 (371)
T COG0484 4 RDYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNPGD--KEAEEKFKEINEAYEVLSDPEKR 63 (371)
T ss_pred cchhhhcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhCCHHHH
Confidence 5999999999999 999999999999999999999964 68999999999999999999885
No 2
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.5e-18 Score=159.92 Aligned_cols=61 Identities=36% Similarity=0.466 Sum_probs=58.2
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+|||+||||+++| +.+|||+|||+||++|||||++++ +.|.++|+.|+.||+||+||.++
T Consensus 15 ~rDfYelLgV~k~A--sd~eIKkAYRKLALk~HPDkNpdd--p~A~e~F~~in~AYEVLsDpekR 75 (336)
T KOG0713|consen 15 GRDFYELLGVPKNA--SDQEIKKAYRKLALKYHPDKNPDD--PNANEKFKEINAAYEVLSDPEKR 75 (336)
T ss_pred CCCHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHHHhcCHHHH
Confidence 37999999999999 999999999999999999999987 78999999999999999999874
No 3
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.67 E-value=5.3e-17 Score=152.06 Aligned_cols=60 Identities=42% Similarity=0.555 Sum_probs=55.7
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. ++|+++|++|++||+||+||.++
T Consensus 3 ~dyY~vLgv~~~A--s~~eIkkayrkla~k~HPD~~~~~--~~a~~~f~~i~~AYevLsd~~kR 62 (369)
T PRK14288 3 LSYYEILEVEKHS--NQETIKKSYRKLALKYHPDRNAGD--KEAEEKFKLINEAYGVLSDEKKR 62 (369)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--cHHHHHHHHHHHHHHHhccHHHH
Confidence 5999999999999 999999999999999999999753 46899999999999999999874
No 4
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.66 E-value=2.6e-16 Score=109.79 Aligned_cols=60 Identities=42% Similarity=0.626 Sum_probs=55.3
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCcc
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k 233 (235)
.+||+||||++++ +.++|++||+++++++|||++++. .+.+++.|+.|++||++|+||.+
T Consensus 1 ~~~y~vLgl~~~~--~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~~~~~l~~Ay~~L~~~~~ 60 (60)
T smart00271 1 TDYYEILGVPRDA--SLDEIKKAYRKLALKYHPDKNPGD-KEEAEEKFKEINEAYEVLSDPEK 60 (60)
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHHHcCCCC
Confidence 3799999999999 999999999999999999999864 46799999999999999999864
No 5
>PRK14296 chaperone protein DnaJ; Provisional
Probab=99.64 E-value=2.2e-16 Score=148.09 Aligned_cols=59 Identities=25% Similarity=0.347 Sum_probs=55.2
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++ +.|+++|++|++||+||+||.|+
T Consensus 4 ~dyY~~Lgv~~~a--~~~eik~ayrkla~~~HPD~n~~---~~a~~~F~~i~~AyevLsD~~KR 62 (372)
T PRK14296 4 KDYYEVLGVSKTA--SEQEIRQAYRKLAKQYHPDLNKS---PDAHDKMVEINEAADVLLDKDKR 62 (372)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---chHHHHHHHHHHHHHHhcCHHHh
Confidence 4999999999999 99999999999999999999875 36899999999999999999875
No 6
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.63 E-value=3.6e-16 Score=147.58 Aligned_cols=60 Identities=35% Similarity=0.479 Sum_probs=56.3
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. +.|+++|++|++||++|+||.|+
T Consensus 9 ~Dyy~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vLsD~~KR 68 (392)
T PRK14279 9 KDFYKELGVSSDA--SAEEIKKAYRKLARELHPDANPGD--PAAEERFKAVSEAHDVLSDPAKR 68 (392)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCC--hHHHHHHHHHHHHHHHhcchhhh
Confidence 5999999999999 999999999999999999999764 57899999999999999999885
No 7
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.62 E-value=1.3e-15 Score=104.39 Aligned_cols=55 Identities=42% Similarity=0.604 Sum_probs=51.7
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccC
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCD 230 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsD 230 (235)
+||+||||++.+ +.++|+++||+|++++|||+.++. +.+.+.|+.|++||++|+|
T Consensus 1 ~~y~vLgl~~~~--~~~~ik~~y~~l~~~~HPD~~~~~--~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDA--SDEEIKKAYRKLALKYHPDKNPDD--PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcC
Confidence 689999999999 999999999999999999999864 5789999999999999986
No 8
>PRK14286 chaperone protein DnaJ; Provisional
Probab=99.61 E-value=5.5e-16 Score=145.37 Aligned_cols=60 Identities=40% Similarity=0.583 Sum_probs=55.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. ++|+++|++|++||+||+||.++
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kR 63 (372)
T PRK14286 4 RSYYDILGVSKSA--NDEEIKSAYRKLAIKYHPDKNKGN--KESEEKFKEATEAYEILRDPKKR 63 (372)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhccHHHH
Confidence 4999999999999 999999999999999999998754 56899999999999999999874
No 9
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.59 E-value=9.5e-16 Score=108.72 Aligned_cols=59 Identities=37% Similarity=0.549 Sum_probs=54.6
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCcc
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k 233 (235)
+||+||||++++ +.++|+++|+++++++|||+.++.. ..+++.|..|++||++|++|.+
T Consensus 1 ~~y~iLgl~~~~--~~~eik~~y~~l~~~~HPD~~~~~~-~~~~~~~~~i~~Ay~~L~~~~~ 59 (64)
T PF00226_consen 1 NPYEILGLPPDA--SDEEIKKAYRRLSKQYHPDKNSGDE-AEAEEKFARINEAYEILSDPER 59 (64)
T ss_dssp HHHHHCTSTTTS--SHHHHHHHHHHHHHHTSTTTGTSTH-HHHHHHHHHHHHHHHHHHSHHH
T ss_pred ChHHHCCCCCCC--CHHHHHHHHHhhhhccccccchhhh-hhhhHHHHHHHHHHHHhCCHHH
Confidence 589999999999 9999999999999999999988763 4689999999999999999865
No 10
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.59 E-value=1.6e-15 Score=141.88 Aligned_cols=60 Identities=35% Similarity=0.555 Sum_probs=55.9
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. +.|+++|++|++||++|+||.++
T Consensus 3 ~d~y~iLgv~~~a--~~~eIk~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr 62 (365)
T PRK14285 3 RDYYEILGLSKGA--SKDEIKKAYRKIAIKYHPDKNKGN--KEAESIFKEATEAYEVLIDDNKR 62 (365)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHcCcchh
Confidence 5999999999999 999999999999999999998764 56889999999999999999875
No 11
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.59 E-value=9.4e-16 Score=142.23 Aligned_cols=58 Identities=40% Similarity=0.534 Sum_probs=54.9
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
...+|+||||.++| +.+|||+|||+||++|||||+++ +.++|++|..||+||+||+|+
T Consensus 3 ~~~~y~il~v~~~A--s~~eikkayrkla~k~HpDkn~~-----~~ekfkei~~AyevLsd~ekr 60 (337)
T KOG0712|consen 3 NTKLYDILGVSPDA--SEEEIKKAYRKLALKYHPDKNPD-----AGEKFKEISQAYEVLSDPEKR 60 (337)
T ss_pred ccccceeeccCCCc--CHHHHHHHHHHHHHHhCCCCCcc-----HHHHHHHHHHHHHHhcCHHHH
Confidence 35899999999999 99999999999999999999997 789999999999999999875
No 12
>PRK14295 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=1.8e-15 Score=142.70 Aligned_cols=60 Identities=37% Similarity=0.517 Sum_probs=55.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. ++|+++|++|++||++|+||.++
T Consensus 9 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r 68 (389)
T PRK14295 9 KDYYKVLGVPKDA--TEAEIKKAYRKLAREYHPDANKGD--AKAEERFKEISEAYDVLSDEKKR 68 (389)
T ss_pred cCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hhHHHHHHHHHHHHHHHCchhhH
Confidence 5999999999999 999999999999999999998754 46899999999999999999864
No 13
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.58 E-value=1.8e-15 Score=141.62 Aligned_cols=61 Identities=34% Similarity=0.566 Sum_probs=55.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. ++.|+++|++|++||++|+||.++
T Consensus 4 ~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~vL~d~~kR 64 (369)
T PRK14282 4 KDYYEILGVSRNA--TQEEIKRAYKRLVKEWHPDRHPEN-RKEAEQKFKEIQEAYEVLSDPQKR 64 (369)
T ss_pred CChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCccc-hhHHHHHHHHHHHHHHHhcChhhH
Confidence 4999999999999 999999999999999999998753 246899999999999999999874
No 14
>PRK14277 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=2.1e-15 Score=142.01 Aligned_cols=60 Identities=37% Similarity=0.488 Sum_probs=55.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. +.|+++|++|++||++|+||.++
T Consensus 5 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr 64 (386)
T PRK14277 5 KDYYEILGVDRNA--TEEEIKKAYRRLAKKYHPDLNPGD--KEAEQKFKEINEAYEILSDPQKR 64 (386)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhCCHHHH
Confidence 5999999999999 999999999999999999999854 56899999999999999999864
No 15
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=2.4e-15 Score=141.09 Aligned_cols=59 Identities=36% Similarity=0.517 Sum_probs=55.0
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||+++. +.|+++|++|++||++|+||.++
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~~~~~f~~i~~Ay~~L~d~~kR 62 (371)
T PRK14287 4 RDYYEVLGVDRNA--SVDEVKKAYRKLARKYHPDVNKA---PDAEDKFKEVKEAYDTLSDPQKK 62 (371)
T ss_pred CCHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCcHhHH
Confidence 4999999999999 99999999999999999999874 46889999999999999999874
No 16
>PRK14297 chaperone protein DnaJ; Provisional
Probab=99.57 E-value=3e-15 Score=140.60 Aligned_cols=60 Identities=38% Similarity=0.566 Sum_probs=55.9
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.++||+|||+||++||||++++. ++|+++|++|++||++|+||.++
T Consensus 4 ~d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r 63 (380)
T PRK14297 4 KDYYEVLGLEKGA--SDDEIKKAFRKLAIKYHPDKNKGN--KEAEEKFKEINEAYQVLSDPQKK 63 (380)
T ss_pred CChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--HHHHHHHHHHHHHHHHhcCHhhh
Confidence 4999999999999 999999999999999999999764 57899999999999999999875
No 17
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.57 E-value=2.4e-15 Score=143.36 Aligned_cols=64 Identities=28% Similarity=0.432 Sum_probs=58.4
Q ss_pred CCccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 168 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 168 ~~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
..+..||+||||...+ +..+||++||+|||+||||++++. .++|+++|+.|+.||+||+||..+
T Consensus 5 ~~~~c~YE~L~v~~~a--~d~eik~~YRklALq~HPDknpd~-ieeat~~F~~i~aAYeVLSdp~eR 68 (508)
T KOG0717|consen 5 FKKRCYYEVLGVERDA--DDDEIKKNYRKLALQYHPDKNPDR-IEEATQQFQLIQAAYEVLSDPQER 68 (508)
T ss_pred hhhhHHHHHhcccccC--CHHHHHHHHHHHHHhhCCCCCCcc-HHHHHHHHHHHHHHHHHhcChHhh
Confidence 3457999999999999 999999999999999999998864 478999999999999999999754
No 18
>PRK14301 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.3e-15 Score=140.18 Aligned_cols=60 Identities=35% Similarity=0.532 Sum_probs=55.9
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.++||+|||+||++||||++++. ++|+++|++|++||+||+||.++
T Consensus 4 ~~~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kr 63 (373)
T PRK14301 4 RDYYEVLGVSRDA--SEDEIKKAYRKLALQYHPDRNPDN--PEAEQKFKEAAEAYEVLRDAEKR 63 (373)
T ss_pred CChHHhcCCCCCC--CHHHHHHHHHHHHHHhCCCcCCCC--hHHHHHHHHHHHHHHHhcchhhh
Confidence 5999999999999 999999999999999999999764 56899999999999999999874
No 19
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.56 E-value=3.2e-15 Score=134.58 Aligned_cols=62 Identities=34% Similarity=0.486 Sum_probs=58.2
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccCC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAVD 235 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~~ 235 (235)
-.++|+||||++++ +.++||+|||+|+++||||++++. +++..+|++||.||+||+||.+++
T Consensus 30 ~~~LYdVLgl~k~a--t~d~IKKaYR~L~~k~HPD~~gd~--P~~~dkf~eIN~Ay~ILsD~~kR~ 91 (279)
T KOG0716|consen 30 RLDLYDVLGLPKTA--TKDEIKKAYRKLALKYHPDKNGDN--PEATDKFKEINTAYAILSDPTKRN 91 (279)
T ss_pred hhHHHHHhCCCccc--chHHHHHHHHHHHHHhCCCcCCCC--chhHHHHHHHHHHHHHhcChhhhh
Confidence 37999999999999 999999999999999999999986 689999999999999999998863
No 20
>PRK14278 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.6e-15 Score=140.16 Aligned_cols=59 Identities=34% Similarity=0.399 Sum_probs=55.1
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.++||+|||+||++||||++++ ++|+++|++|++||++|+||.++
T Consensus 3 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~hpD~~~~---~~a~~~f~~i~~Ay~vL~d~~~r 61 (378)
T PRK14278 3 RDYYGLLGVSRNA--SDAEIKRAYRKLARELHPDVNPD---EEAQEKFKEISVAYEVLSDPEKR 61 (378)
T ss_pred CCcceecCCCCCC--CHHHHHHHHHHHHHHHCCCCCCc---HHHHHHHHHHHHHHHHhchhhhh
Confidence 4899999999999 99999999999999999999974 47899999999999999999874
No 21
>PRK14276 chaperone protein DnaJ; Provisional
Probab=99.56 E-value=3.2e-15 Score=140.49 Aligned_cols=59 Identities=32% Similarity=0.492 Sum_probs=55.1
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.++
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~---~~a~~~f~~i~~Ay~vL~d~~kR 62 (380)
T PRK14276 4 TEYYDRLGVSKDA--SQDEIKKAYRKLSKKYHPDINKE---PGAEEKYKEVQEAYETLSDPQKR 62 (380)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhcCHhhh
Confidence 5999999999999 99999999999999999999975 35899999999999999999874
No 22
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=3.9e-15 Score=139.25 Aligned_cols=60 Identities=37% Similarity=0.552 Sum_probs=55.6
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. ++++++|++|++||++|+||.++
T Consensus 4 ~d~y~~lgv~~~a--~~~eik~ayr~la~~~HPD~~~~~--~~~~~~f~~~~~Ay~vL~d~~~r 63 (366)
T PRK14294 4 RDYYEILGVTRDA--SEEEIKKSYRKLAMKYHPDRNPGD--KEAEELFKEAAEAYEVLSDPKKR 63 (366)
T ss_pred CChHHHhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--hHHHHHHHHHHHHHHHhccHHHH
Confidence 5999999999999 999999999999999999999764 46899999999999999999764
No 23
>PRK14283 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=3.8e-15 Score=139.83 Aligned_cols=59 Identities=37% Similarity=0.457 Sum_probs=55.1
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++ +.|+++|++|++||++|+||.++
T Consensus 5 ~d~y~~Lgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~a~~~f~~i~~Ay~~Lsd~~kR 63 (378)
T PRK14283 5 RDYYEVLGVDRNA--DKKEIKKAYRKLARKYHPDVSEE---EGAEEKFKEISEAYAVLSDDEKR 63 (378)
T ss_pred CChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhchhHHH
Confidence 4999999999999 99999999999999999999875 46899999999999999999874
No 24
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4e-15 Score=135.32 Aligned_cols=59 Identities=32% Similarity=0.432 Sum_probs=54.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||+++. +.++++|++|++||++|+||.++
T Consensus 4 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~kr 62 (291)
T PRK14299 4 KDYYAILGVPKNA--SQDEIKKAFKKLARKYHPDVNKS---PGAEEKFKEINEAYTVLSDPEKR 62 (291)
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhcCHHHH
Confidence 5999999999999 99999999999999999999874 46899999999999999998763
No 25
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=99.55 E-value=2.6e-15 Score=143.19 Aligned_cols=56 Identities=36% Similarity=0.445 Sum_probs=52.1
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+||+||||+++| +.+|||+|||+||++||||++++ .++|++|++||++|+||.|+
T Consensus 28 ~d~Y~vLGV~~~A--s~~eIKkAYrkla~k~HPDk~~~------~e~F~~i~~AYevLsD~~kR 83 (421)
T PTZ00037 28 EKLYEVLNLSKDC--TTSEIKKAYRKLAIKHHPDKGGD------PEKFKEISRAYEVLSDPEKR 83 (421)
T ss_pred hhHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCch------HHHHHHHHHHHHHhccHHHH
Confidence 5999999999999 99999999999999999999753 48999999999999999874
No 26
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.1e-15 Score=139.85 Aligned_cols=59 Identities=42% Similarity=0.589 Sum_probs=55.0
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||+++. +.++++|++|++||++|+||.++
T Consensus 5 ~d~y~iLgv~~~a--~~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vL~d~~kR 63 (377)
T PRK14298 5 RDYYEILGLSKDA--SVEDIKKAYRKLAMKYHPDKNKE---PDAEEKFKEISEAYAVLSDAEKR 63 (377)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHhCccccCC---hhHHHHHHHHHHHHHHhcchHhh
Confidence 4999999999999 99999999999999999999874 46889999999999999999874
No 27
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=4.4e-15 Score=140.03 Aligned_cols=59 Identities=39% Similarity=0.595 Sum_probs=55.2
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
|||+||||+++| +.+|||+|||+||++||||++++. +.|+++|++|++||++|+||.++
T Consensus 2 d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~kR 60 (391)
T PRK14284 2 DYYTILGVSKTA--SPEEIKKAYRKLAVKYHPDKNPGD--AEAEKRFKEVSEAYEVLSDAQKR 60 (391)
T ss_pred CHHHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc--hHHHHHHHHHHHHHHHhcCHHHH
Confidence 899999999999 999999999999999999999864 56899999999999999999764
No 28
>PRK14281 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.3e-15 Score=139.85 Aligned_cols=60 Identities=35% Similarity=0.531 Sum_probs=55.6
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.++
T Consensus 3 ~d~y~iLgv~~~a--~~~eikkayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~vL~d~~~r 62 (397)
T PRK14281 3 RDYYEVLGVSRSA--DKDEIKKAYRKLALKYHPDKNPDN--KEAEEHFKEVNEAYEVLSNDDKR 62 (397)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCcCCCc--hHHHHHHHHHHHHHHHhhhhhhh
Confidence 4999999999999 999999999999999999999764 46889999999999999999864
No 29
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.55 E-value=5.9e-15 Score=138.10 Aligned_cols=60 Identities=38% Similarity=0.581 Sum_probs=55.6
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.++||+|||+||++||||++++. +.|+++|++|++||++|+||.++
T Consensus 4 ~d~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~r 63 (371)
T PRK10767 4 RDYYEVLGVSRNA--SEDEIKKAYRKLAMKYHPDRNPGD--KEAEEKFKEIKEAYEVLSDPQKR 63 (371)
T ss_pred CChHHhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHHHHHHHHhcchhhh
Confidence 4999999999999 999999999999999999999754 46899999999999999999864
No 30
>PRK14291 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=5.4e-15 Score=139.09 Aligned_cols=59 Identities=39% Similarity=0.505 Sum_probs=54.9
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.++||+|||+||++||||++++ +.|+++|++|++||++|+||.++
T Consensus 3 ~d~Y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~vLsd~~kR 61 (382)
T PRK14291 3 KDYYEILGVSRNA--TQEEIKKAYRRLARKYHPDFNKN---PEAEEKFKEINEAYQVLSDPEKR 61 (382)
T ss_pred CCHHHhhCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC---ccHHHHHHHHHHHHHHhcCHHHH
Confidence 4999999999999 99999999999999999999976 36889999999999999999764
No 31
>PRK14280 chaperone protein DnaJ; Provisional
Probab=99.54 E-value=6.2e-15 Score=138.44 Aligned_cols=59 Identities=36% Similarity=0.502 Sum_probs=55.0
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.++||+|||+||++||||+++.. .|+++|++|++||++|+||.++
T Consensus 4 ~~~y~iLgv~~~a--~~~eik~ayr~la~~~HpD~~~~~---~a~~~f~~i~~Ay~vL~d~~kr 62 (376)
T PRK14280 4 RDYYEVLGVSKSA--SKDEIKKAYRKLSKKYHPDINKEE---GADEKFKEISEAYEVLSDDQKR 62 (376)
T ss_pred CChHHhhCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc---cHHHHHHHHHHHHHHhccHhHH
Confidence 5999999999999 999999999999999999998753 5899999999999999999874
No 32
>PRK14292 chaperone protein DnaJ; Provisional
Probab=99.52 E-value=1.7e-14 Score=135.08 Aligned_cols=60 Identities=37% Similarity=0.529 Sum_probs=55.7
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
|.|||+||||+++| +.++||+|||+||++||||+++. +.|+++|++|++||++|+||.++
T Consensus 1 ~~d~y~~Lgv~~~a--~~~~ik~ayr~l~~~~hpD~~~~---~~a~~~~~~i~~Ay~vL~d~~~r 60 (371)
T PRK14292 1 MMDYYELLGVSRTA--SADEIKSAYRKLALKYHPDRNKE---KGAAEKFAQINEAYAVLSDAEKR 60 (371)
T ss_pred CCChHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC---hhHHHHHHHHHHHHHHhcchhhh
Confidence 46999999999999 99999999999999999999974 46899999999999999999874
No 33
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=1.2e-14 Score=133.00 Aligned_cols=60 Identities=35% Similarity=0.538 Sum_probs=56.6
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||.||||+..+ +..+|++|||..|++|||||++++ +.|.++|+.|.+||+||+|+.++
T Consensus 5 ~dyY~lLgi~~~a--t~~eIkKaYr~kaL~~HPDKNp~d--P~A~ekFq~L~eAy~VL~D~~~R 64 (296)
T KOG0691|consen 5 TDYYDLLGISEDA--TDAEIKKAYRKKALQYHPDKNPGD--PQAAEKFQELSEAYEVLSDEESR 64 (296)
T ss_pred chHHHHhCCCCCC--CHHHHHHHHHHHHHhcCCCCCCCC--hHHHHHHHHHHHHHHHhcCHHHH
Confidence 5999999999999 999999999999999999999987 56999999999999999998753
No 34
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.51 E-value=1.7e-14 Score=134.98 Aligned_cols=61 Identities=46% Similarity=0.620 Sum_probs=55.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. .++|+++|++|++||++|+||.++
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~-~~~a~~~f~~i~~Ay~~L~d~~~r 63 (365)
T PRK14290 3 KDYYKILGVDRNA--SQEDIKKAFRELAKKWHPDLHPGN-KAEAEEKFKEISEAYEVLSDPQKR 63 (365)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCCc-hhHHHHHHHHHHHHHHHhcChhhh
Confidence 5999999999999 999999999999999999998754 246899999999999999999864
No 35
>PRK14289 chaperone protein DnaJ; Provisional
Probab=99.50 E-value=2.4e-14 Score=134.75 Aligned_cols=60 Identities=35% Similarity=0.580 Sum_probs=55.7
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||++++. ++|+++|++|++||++|+||.++
T Consensus 5 ~~~y~~Lgv~~~a--~~~eik~ayr~la~~~HpD~~~~~--~~a~~~f~~i~~Ay~~L~d~~~R 64 (386)
T PRK14289 5 RDYYEVLGVSKTA--TVDEIKKAYRKKAIQYHPDKNPGD--KEAEEKFKEAAEAYDVLSDPDKR 64 (386)
T ss_pred CCHHHHcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCC--hHHHHHHHHHHHHHHHhcCHHHH
Confidence 5999999999999 999999999999999999999864 57999999999999999999753
No 36
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=99.50 E-value=2.1e-14 Score=131.37 Aligned_cols=59 Identities=31% Similarity=0.447 Sum_probs=54.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||++.+ +.++||+|||+||++||||+++. +.++++|++|++||++|+||.++
T Consensus 4 ~d~y~~Lgv~~~a--~~~eik~ayr~la~k~HPD~~~~---~~~~~~f~~i~~Ay~~L~~~~kr 62 (306)
T PRK10266 4 KDYYAIMGVKPTD--DLKTIKTAYRRLARKYHPDVSKE---PDAEARFKEVAEAWEVLSDEQRR 62 (306)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---ccHHHHHHHHHHHHHHhhhHHHH
Confidence 5999999999999 99999999999999999999865 36899999999999999999764
No 37
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=2e-14 Score=137.31 Aligned_cols=66 Identities=35% Similarity=0.426 Sum_probs=59.5
Q ss_pred CCCccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHHHHHHHccCCccC
Q 026631 167 ESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 167 ~~~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~-~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
+.+..++|.+|||+++| +.+||++|||++++.|||||+.++. ++.|+++|+.|..||+||+||.++
T Consensus 5 e~~e~e~Ya~LNlpkdA--t~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kR 71 (546)
T KOG0718|consen 5 ELDEIELYALLNLPKDA--TDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKR 71 (546)
T ss_pred ccchhhHHHHhCCCccc--CHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 34446999999999999 9999999999999999999998544 667999999999999999999874
No 38
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.49 E-value=2e-14 Score=131.15 Aligned_cols=58 Identities=34% Similarity=0.496 Sum_probs=55.5
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
+||+||||+++| +..|||+||++||++||||.+.+. .|+++|++|.+||++|+|++|+
T Consensus 44 d~Y~vLgv~~~A--t~~EIK~Af~~LaKkyHPD~n~~~---~a~~kF~eI~~AYEiLsd~eKR 101 (288)
T KOG0715|consen 44 DYYKVLGVSRNA--TLSEIKSAFRKLAKKYHPDVNKDK---EASKKFKEISEAYEILSDEEKR 101 (288)
T ss_pred chhhhhCcCCCC--CHHHHHHHHHHHHHhhCCCCCCCc---chhhHHHHHHHHHHHhcCHHHH
Confidence 999999999999 999999999999999999999885 7999999999999999999874
No 39
>PRK14300 chaperone protein DnaJ; Provisional
Probab=99.48 E-value=3e-14 Score=133.63 Aligned_cols=59 Identities=36% Similarity=0.441 Sum_probs=54.5
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||+++| +.+|||+|||+||++||||+++. +.++++|++|++||++|+||.++
T Consensus 3 ~~~y~iLgv~~~a--s~~eik~ayr~la~~~HPD~~~~---~~~~~~f~~i~~Ay~~L~d~~~r 61 (372)
T PRK14300 3 QDYYQILGVSKTA--SQADLKKAYLKLAKQYHPDTTDA---KDAEKKFKEINAAYDVLKDEQKR 61 (372)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---cCHHHHHHHHHHHHHHhhhHhHh
Confidence 5999999999999 99999999999999999999874 35889999999999999999764
No 40
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.46 E-value=7.2e-14 Score=115.75 Aligned_cols=63 Identities=46% Similarity=0.663 Sum_probs=57.1
Q ss_pred CccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 169 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 169 ~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+.+||+||||++++ +..+|++|||++|++||||+++.... .++++|+.|++||++|+|+.++
T Consensus 4 ~~~~~y~iLgv~~~a--s~~eik~ayrkla~~~HPD~~~~~~~-~a~~~f~~i~~Ay~vLsd~~~r 66 (237)
T COG2214 4 DLLDYYEILGVPPNA--SLEEIKKAYRKLALKYHPDRNPGDPK-VAEEKFKEINEAYEILSDPERR 66 (237)
T ss_pred hhhhHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCchh-HHHHHHHHHHHHHHHhhCHHHH
Confidence 457999999999999 99999999999999999999997632 5999999999999999998753
No 41
>PRK14293 chaperone protein DnaJ; Provisional
Probab=99.46 E-value=5.8e-14 Score=131.73 Aligned_cols=59 Identities=34% Similarity=0.487 Sum_probs=54.6
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.|||+||||++++ +.++||+|||+||++||||+++.. .++++|++|++||++|+||.++
T Consensus 3 ~d~y~vLgv~~~a--~~~eik~ayr~la~~~HPD~~~~~---~a~~~f~~i~~Ay~vL~~~~~R 61 (374)
T PRK14293 3 ADYYEILGVSRDA--DKDELKRAYRRLARKYHPDVNKEP---GAEDRFKEINRAYEVLSDPETR 61 (374)
T ss_pred CChhhhcCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCc---CHHHHHHHHHHHHHHHhchHHH
Confidence 5899999999999 999999999999999999998753 5889999999999999999864
No 42
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.45 E-value=4.8e-14 Score=125.03 Aligned_cols=62 Identities=31% Similarity=0.433 Sum_probs=57.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.++|+||||.++| +..+|++||++|++++|||+++...+.+|.++|+.|+.||+||+|.+++
T Consensus 14 ~d~YevLGVer~a--~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR 75 (264)
T KOG0719|consen 14 KDLYEVLGVERDA--TDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKR 75 (264)
T ss_pred cCHHHHhhhcccC--CHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 5999999999999 9999999999999999999998766778999999999999999997653
No 43
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=2e-13 Score=119.87 Aligned_cols=62 Identities=32% Similarity=0.468 Sum_probs=56.3
Q ss_pred CccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 169 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 169 ~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
...|||+||||++++ +..|||+|||+|++++||||.+.. ...++.|..|.+||+.|+|++.+
T Consensus 97 ~~fDPyEILGl~pga--s~~eIKkaYR~LSik~HPDK~~~~--~~~e~~~~~I~KAY~aLTD~~sr 158 (230)
T KOG0721|consen 97 QKFDPYEILGLDPGA--SEKEIKKAYRRLSIKYHPDKQPPE--EGDEEFFEAIAKAYQALTDKKSR 158 (230)
T ss_pred hcCCcHHhhCCCCCC--CHHHHHHHHHHhhhhhCCCcCCCc--chhHHHHHHHHHHHHHhcchhhH
Confidence 346999999999999 999999999999999999999875 36888999999999999998764
No 44
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.41 E-value=1.9e-13 Score=139.87 Aligned_cols=59 Identities=24% Similarity=0.277 Sum_probs=55.4
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+||+||||+++| +..+||+|||+||++||||+++++ .|.++|+.|.+||++|+||.++
T Consensus 573 ~dYYdILGVs~dA--S~~EIKKAYRKLAlkyHPDKN~~~---~A~ekFq~I~EAYeVLSDp~kR 631 (1136)
T PTZ00341 573 TLFYDILGVGVNA--DMKEISERYFKLAENYYPPKRSGN---EGFHKFKKINEAYQILGDIDKK 631 (1136)
T ss_pred CChHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCc---hHHHHHHHHHHHHHHhCCHHHH
Confidence 7999999999999 999999999999999999999864 5888999999999999999874
No 45
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.38 E-value=8.3e-13 Score=112.22 Aligned_cols=63 Identities=22% Similarity=0.272 Sum_probs=55.0
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCccC
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~---~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
+||+||||++.+.++..+|+++||++++++|||+..+.. +..+.+.+..|++||++|+||.++
T Consensus 2 ~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~R 67 (171)
T PRK05014 2 DYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKR 67 (171)
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHH
Confidence 899999999986568999999999999999999987543 234778999999999999999763
No 46
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.36 E-value=7.1e-13 Score=112.27 Aligned_cols=65 Identities=26% Similarity=0.262 Sum_probs=54.9
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHHHHHHHccCCccC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~-~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
|.+||+||||++...++..+|+++||+|++++|||+..... +..+.+.+..|++||++|+||.++
T Consensus 1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~R 66 (166)
T PRK01356 1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKR 66 (166)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 46899999999986569999999999999999999987532 223556789999999999999753
No 47
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.31 E-value=4e-12 Score=108.68 Aligned_cols=64 Identities=30% Similarity=0.332 Sum_probs=54.9
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSK---AVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~---~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+||+||||++...++..+|+++||+|++++|||+++.... ..+.+.+..||+||++|+||.++
T Consensus 6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~R 72 (176)
T PRK03578 6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKR 72 (176)
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhH
Confidence 69999999999876699999999999999999999875432 23566789999999999999764
No 48
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.31 E-value=4.2e-12 Score=108.36 Aligned_cols=64 Identities=27% Similarity=0.279 Sum_probs=56.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~---~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+||++|||++...++..+|+++||+|++++|||++.+.. +..+.+.+..|++||++|+||.++
T Consensus 4 ~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~R 70 (173)
T PRK00294 4 PCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRR 70 (173)
T ss_pred CChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhh
Confidence 5899999999998789999999999999999999987543 344788999999999999999764
No 49
>PHA03102 Small T antigen; Reviewed
Probab=99.31 E-value=1.8e-12 Score=108.76 Aligned_cols=58 Identities=28% Similarity=0.316 Sum_probs=51.3
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCcc
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k 233 (235)
...+|+||||+++|-.+.++||+|||++|+++|||++++ +++|++|++||++|+|+.+
T Consensus 4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~------~e~~k~in~Ay~~L~d~~~ 61 (153)
T PHA03102 4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD------EEKMKELNTLYKKFRESVK 61 (153)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch------hHHHHHHHHHHHHHhhHHH
Confidence 357899999999875589999999999999999999653 4799999999999999865
No 50
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.29 E-value=4.2e-12 Score=114.72 Aligned_cols=62 Identities=26% Similarity=0.374 Sum_probs=54.4
Q ss_pred CCccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----CChHHHHHHHHHHHHHHHHccCC
Q 026631 168 SDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG-----SSKAVAEEKFKLCSAAYQSLCDK 231 (235)
Q Consensus 168 ~~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~-----~~~~~a~ekF~~I~eAYevLsDp 231 (235)
..+.++|+||||++++ +.++||+|||+|+++||||+..+ ...+.++++|++|++||++|+..
T Consensus 197 ~~~~~ay~vLgv~~~a--s~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 197 PTLEDAYKVLGVSESD--DDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred CcHHhHHHHcCCCCCC--CHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 4568999999999999 99999999999999999999643 12356899999999999999864
No 51
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=99.25 E-value=7.2e-12 Score=126.05 Aligned_cols=59 Identities=25% Similarity=0.342 Sum_probs=54.5
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+||+||||++++ +.++||+|||+|+++||||++++ +.+.++|++|++||++|+||.++
T Consensus 2 ~DYYeVLGVs~dA--S~eEIKKAYRKLAKKyHPDKn~~---~eAeekFqeINEAYEVLSDP~KR 60 (871)
T TIGR03835 2 RDYYEVLGIDRDA--DEQEIKKAFRKLAKKYHPDRNKA---PDAASIFAEINEANDVLSNPKKR 60 (871)
T ss_pred CChhHhcCCCCCC--CHHHHHHHHHHHHHHHCcCCCCC---hhHHHHHHHHHHHHHHhCCHHHH
Confidence 4899999999999 99999999999999999999876 46888999999999999998763
No 52
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.23 E-value=5.6e-12 Score=118.07 Aligned_cols=64 Identities=33% Similarity=0.414 Sum_probs=59.1
Q ss_pred CccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHHHHHHHHHccCCccC
Q 026631 169 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 169 ~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~-~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.-+|||+||||.++| +..||.+|||++|++||||..++.+ ++.|+.+|..|..|-+||+||+++
T Consensus 392 ~kRDYYKILGVkRnA--sKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkR 456 (504)
T KOG0624|consen 392 GKRDYYKILGVKRNA--SKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKR 456 (504)
T ss_pred ccchHHHHhhhcccc--cHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHH
Confidence 347999999999999 9999999999999999999998765 667999999999999999999874
No 53
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.23 E-value=1.2e-11 Score=99.41 Aligned_cols=52 Identities=17% Similarity=0.165 Sum_probs=46.8
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHcc
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLC 229 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLs 229 (235)
..++|+||||++++ +.++|+++||+|++++|||+.+ ..+.|++|++||++|.
T Consensus 64 ~~eAy~ILGv~~~A--s~~eIkkaYRrLa~~~HPDkgG------s~~~~~kIneAyevL~ 115 (116)
T PTZ00100 64 KSEAYKILNISPTA--SKERIREAHKQLMLRNHPDNGG------STYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHHcCCCCCC--CHHHHHHHHHHHHHHhCCCCCC------CHHHHHHHHHHHHHHh
Confidence 36999999999999 9999999999999999999853 2468899999999985
No 54
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.14 E-value=2.8e-11 Score=105.15 Aligned_cols=61 Identities=43% Similarity=0.592 Sum_probs=55.8
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.++|.||||.+.+ +.++|++||+++|++||||+++.. ...++.+|++|.+||++|+|+.++
T Consensus 3 ~d~~~~l~i~~~a--s~~~i~ka~~~~a~~~hpdk~~~~-~~~~~~~~~~~~ea~~~ls~~~kr 63 (306)
T KOG0714|consen 3 KDYYKILGIARSA--SEEDIKKAYRKLALKYHPDKNPSP-KEVAEAKFKEIAEAYEVLSDPKKR 63 (306)
T ss_pred ccHHHHhCccccc--cHHHHHHHHHHHHHhhCCCCCCCc-hhhHHHHHhhhhccccccCCHHHh
Confidence 5899999999999 888999999999999999998877 667777999999999999999874
No 55
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.06 E-value=1.4e-10 Score=111.11 Aligned_cols=60 Identities=30% Similarity=0.378 Sum_probs=56.3
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCccC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
..|+|.||||++++ +.++||+.||++|+..||||+-. +.|+|.|+.|+.||++|+|+.++
T Consensus 234 ~~daYsvlGl~~d~--sd~~lKk~Yrk~A~LVhPDKn~~---~~A~Eafk~Lq~Afevig~~~kR 293 (490)
T KOG0720|consen 234 ILDAYSALGLPSDC--SDADLKKNYRKKAMLVHPDKNMI---PRAEEAFKKLQVAFEVIGDSVKR 293 (490)
T ss_pred CCCchhhcCCCCCC--CHHHHHHHHHhhceEeCCCccCC---hhHHHHHHHHHHHHHHhcchhhh
Confidence 68999999999999 99999999999999999999984 57999999999999999998764
No 56
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.05 E-value=3.5e-10 Score=96.60 Aligned_cols=65 Identities=23% Similarity=0.150 Sum_probs=57.2
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCccC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~---~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
|.|||++|||++...++...|+++|+.|.+++|||+....+ +..+.+.-..||+||++|+||.++
T Consensus 1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~R 68 (173)
T PRK01773 1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILR 68 (173)
T ss_pred CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHH
Confidence 56999999999998789999999999999999999987654 234778889999999999999753
No 57
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=1.3e-10 Score=110.44 Aligned_cols=61 Identities=36% Similarity=0.514 Sum_probs=57.5
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCcc
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k 233 (235)
-.++|.||||...+ +..+||+|||++|+.+|||++.+. +.+++.+|++|-+||.+|+||.+
T Consensus 372 Rkd~ykilGi~~~a--s~~eikkayrk~AL~~Hpd~~ags-q~eaE~kFkevgeAy~il~d~~k 432 (486)
T KOG0550|consen 372 RKDWYKILGISRNA--SDDEIKKAYRKLALVHHPDKNAGS-QKEAEAKFKEVGEAYTILSDPMK 432 (486)
T ss_pred hhhHHHHhhhhhhc--ccchhhhHHHHHHHHhCCCcCcch-hHHHHHHHHHHHHHHHHhcCHHH
Confidence 37999999999999 999999999999999999999886 67899999999999999999876
No 58
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=2e-10 Score=103.53 Aligned_cols=63 Identities=24% Similarity=0.344 Sum_probs=56.4
Q ss_pred CCCCccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCcc
Q 026631 166 SESDMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 166 ~~~~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k 233 (235)
.-+...|.|+||||.+++ +..+|++|||+||+++|||+++++ +..+.|+.|..||++|.|.+.
T Consensus 28 LYCG~enCYdVLgV~Rea--~KseIakAYRqLARrhHPDr~r~~---e~k~~F~~iAtayeilkd~e~ 90 (329)
T KOG0722|consen 28 LYCGAENCYDVLGVAREA--NKSEIAKAYRQLARRHHPDRNRDP---ESKKLFVKIATAYEILKDNET 90 (329)
T ss_pred hcccchhHHHHhhhhhhc--cHHHHHHHHHHHHHHhCCcccCCc---hhhhhhhhhhcccccccchhh
Confidence 345568999999999999 999999999999999999999985 466899999999999998653
No 59
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.98 E-value=2.4e-10 Score=109.57 Aligned_cols=64 Identities=30% Similarity=0.413 Sum_probs=58.0
Q ss_pred CccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---CChHHHHHHHHHHHHHHHHccCCccC
Q 026631 169 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG---SSKAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 169 ~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~---~~~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
.+-|+|+||||..++ +..+||++||+|++|+||||.+. ..+.+.+++++.|++||..|+|.+.+
T Consensus 96 ~~fDPyEILGI~~~t--s~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~r 162 (610)
T COG5407 96 RGFDPYEILGIDQDT--SERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRR 162 (610)
T ss_pred cCCChHHhhcccCCC--cHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 346999999999999 99999999999999999999886 55678999999999999999997653
No 60
>PHA02624 large T antigen; Provisional
Probab=98.97 E-value=4.9e-10 Score=111.28 Aligned_cols=58 Identities=26% Similarity=0.285 Sum_probs=51.5
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCcc
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k 233 (235)
..++|+||||++++-.+.++||+|||++|++||||+.+ .+++|++|++||++|+|+.+
T Consensus 10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG------deekfk~Ln~AYevL~d~~k 67 (647)
T PHA02624 10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG------DEEKMKRLNSLYKKLQEGVK 67 (647)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC------cHHHHHHHHHHHHHHhcHHH
Confidence 46899999999977558999999999999999999964 35799999999999999765
No 61
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.77 E-value=1.3e-08 Score=85.56 Aligned_cols=50 Identities=28% Similarity=0.414 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCccC
Q 026631 185 LKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 185 ~s~~eIKkAYRklalk~HPDk~~~~~---~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
++..+|+++||+|++++|||+.+... +..+.+.+..|++||++|+||.++
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~R 55 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMR 55 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhh
Confidence 58899999999999999999976543 345889999999999999999864
No 62
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.67 E-value=3.6e-08 Score=91.82 Aligned_cols=35 Identities=37% Similarity=0.600 Sum_probs=33.4
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQG 208 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~ 208 (235)
|||+||||+++| +.++||+|||+||++||||+++.
T Consensus 1 d~y~~Lgv~~~a--~~~~ik~ayr~la~~~HPD~~~~ 35 (354)
T TIGR02349 1 DYYEILGVSKDA--SEEEIKKAYRKLAKKYHPDRNKD 35 (354)
T ss_pred ChHHhCCCCCCC--CHHHHHHHHHHHHHHHCCCCCCC
Confidence 699999999999 99999999999999999999973
No 63
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=2.7e-08 Score=87.15 Aligned_cols=61 Identities=23% Similarity=0.293 Sum_probs=55.7
Q ss_pred CccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCc
Q 026631 169 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKL 232 (235)
Q Consensus 169 ~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~ 232 (235)
-..++|+||.|.|.. +.++||+.||+|++..|||+++++ .+.|...|..|..||.+|-|+.
T Consensus 51 fnLNpfeVLqIdpev--~~edikkryRklSilVHPDKN~Dd-~~rAqkAFdivkKA~k~l~n~~ 111 (250)
T KOG1150|consen 51 FNLNPFEVLQIDPEV--TDEDIKKRYRKLSILVHPDKNPDD-AERAQKAFDIVKKAYKLLENDK 111 (250)
T ss_pred cccChHHHHhcCCCC--CHHHHHHHHHhhheeecCCCCccc-HHHHHHHHHHHHHHHHHHhCHH
Confidence 348999999999999 999999999999999999999976 3568899999999999998875
No 64
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.32 E-value=3.7e-07 Score=83.39 Aligned_cols=63 Identities=24% Similarity=0.270 Sum_probs=52.2
Q ss_pred CccchhhhcCCCC---CCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCcc
Q 026631 169 DMASDRQTLGLCA---SGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 169 ~~~d~YeILGL~~---~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~k 233 (235)
...|+|.+|||+. -+ +..+|.+|.++.+.+||||+..........+.|++|+.||++|+|+.+
T Consensus 41 k~~DlYa~lgLskyR~ka--~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~ 106 (379)
T COG5269 41 KKVDLYALLGLSKYRTKA--IPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKL 106 (379)
T ss_pred hhhhHHHHhchHhhhcCC--CcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHH
Confidence 3479999999995 34 788899999999999999998432223567899999999999999865
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.28 E-value=9.5e-07 Score=92.00 Aligned_cols=56 Identities=25% Similarity=0.395 Sum_probs=47.5
Q ss_pred ccchhhhcCCCCC-CCC-CHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccC
Q 026631 170 MASDRQTLGLCAS-GPL-KLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCD 230 (235)
Q Consensus 170 ~~d~YeILGL~~~-a~~-s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsD 230 (235)
+.+.|+||.|+-+ .+. ..+.||++|++||++|||||+|. ..++|..+++||+.|+.
T Consensus 1280 ~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE-----GRemFe~VnKAYE~L~~ 1337 (2235)
T KOG1789|consen 1280 VDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE-----GREMFERVNKAYELLSS 1337 (2235)
T ss_pred hHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch-----HHHHHHHHHHHHHHHHH
Confidence 4789999999853 222 44889999999999999999985 57999999999999983
No 66
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.89 E-value=1.8e-05 Score=71.17 Aligned_cols=55 Identities=20% Similarity=0.297 Sum_probs=48.9
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHH-Hcc
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQ-SLC 229 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYe-vLs 229 (235)
+..+|.||||..++ +.++|+.||..||+++|||..... ...+.|++|.+||. ||.
T Consensus 46 ~~e~fril~v~e~~--~adevr~af~~lakq~hpdsgs~~---adaa~f~qideafrkvlq 101 (342)
T KOG0568|consen 46 IMECFRILGVEEGA--DADEVREAFHDLAKQVHPDSGSEE---ADAARFIQIDEAFRKVLQ 101 (342)
T ss_pred HHHHHHHhcccccC--chhHHHHHHHHHHHHcCCCCCCcc---ccHHHHHHHHHHHHHHHH
Confidence 46799999999999 999999999999999999988753 46688999999998 665
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.71 E-value=6.8e-05 Score=59.79 Aligned_cols=53 Identities=25% Similarity=0.151 Sum_probs=45.3
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHccCCc
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLCDKL 232 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLsDp~ 232 (235)
..-.||||.++. +.+.||.|+|++.+..|||+.+.+ -.-..|++|+++|....
T Consensus 57 EA~lIL~v~~s~--~k~KikeaHrriM~~NHPD~GGSP------YlAsKINEAKdlLe~~~ 109 (112)
T KOG0723|consen 57 EAALILGVTPSL--DKDKIKEAHRRIMLANHPDRGGSP------YLASKINEAKDLLEGTS 109 (112)
T ss_pred HHHHHhCCCccc--cHHHHHHHHHHHHHcCCCcCCCCH------HHHHHHHHHHHHHhccc
Confidence 455899999999 999999999999999999999865 34467999999997543
No 68
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.00 E-value=0.00057 Score=58.06 Aligned_cols=56 Identities=23% Similarity=0.359 Sum_probs=48.9
Q ss_pred cchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHHHHHHHc
Q 026631 171 ASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS-----KAVAEEKFKLCSAAYQSL 228 (235)
Q Consensus 171 ~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~-----~~~a~ekF~~I~eAYevL 228 (235)
.+.|.+||+.... ...+|+++|+++...+|||+..... ...+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~--~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKA--DQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhh--hHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 6899999999999 9999999999999999999864322 245899999999999875
No 69
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=96.65 E-value=0.0016 Score=55.23 Aligned_cols=65 Identities=28% Similarity=0.222 Sum_probs=53.7
Q ss_pred ccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCccC
Q 026631 170 MASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLAV 234 (235)
Q Consensus 170 ~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~---~~~a~ekF~~I~eAYevLsDp~k~ 234 (235)
..+||.++|......+.+.-++--|....+++|||+...+. ...|.+.-..|++||.+|.||.++
T Consensus 7 ~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~R 74 (168)
T KOG3192|consen 7 PSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLAR 74 (168)
T ss_pred HHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHH
Confidence 46899999998877778888887899999999999954322 125888999999999999999764
No 70
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=96.61 E-value=0.0027 Score=61.78 Aligned_cols=45 Identities=33% Similarity=0.467 Sum_probs=35.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCC----hH-HHHHHHHHHHHHHHHcc
Q 026631 185 LKLEDVKLAYRVCALKWHPDRHQGSS----KA-VAEEKFKLCSAAYQSLC 229 (235)
Q Consensus 185 ~s~~eIKkAYRklalk~HPDk~~~~~----~~-~a~ekF~~I~eAYevLs 229 (235)
++.++||+|||+.+|..||||.+... ++ .+++.|-.+.+|+....
T Consensus 400 Vtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~ 449 (453)
T KOG0431|consen 400 VTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFN 449 (453)
T ss_pred cCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 58999999999999999999987542 12 36777888888887543
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=95.39 E-value=0.0055 Score=52.06 Aligned_cols=62 Identities=31% Similarity=0.388 Sum_probs=49.8
Q ss_pred chhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC---hHHHHHHHHHHHHHHHHccCCcc
Q 026631 172 SDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSS---KAVAEEKFKLCSAAYQSLCDKLA 233 (235)
Q Consensus 172 d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~---~~~a~ekF~~I~eAYevLsDp~k 233 (235)
+++.++|+++.+....+.++..|+.+.+.+|||+..... ...+.+.+..++.||.+|.+|.+
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ 66 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLL 66 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 456677777776667788999999999999999987544 22366789999999999999864
No 72
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=90.68 E-value=0.61 Score=38.30 Aligned_cols=53 Identities=15% Similarity=0.055 Sum_probs=34.8
Q ss_pred CccchhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHHHHHHcc
Q 026631 169 DMASDRQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQGSSKAVAEEKFKLCSAAYQSLC 229 (235)
Q Consensus 169 ~~~d~YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~~~~~~~a~ekF~~I~eAYevLs 229 (235)
.+.....||||++.. +.++|.+.|..|-...+|++.+. .-.--.|..|.+.|.
T Consensus 56 tl~EA~~ILnv~~~~--~~eeI~k~y~~Lf~~Nd~~kGGS------fYLQSKV~rAKErl~ 108 (127)
T PF03656_consen 56 TLDEARQILNVKEEL--SREEIQKRYKHLFKANDPSKGGS------FYLQSKVFRAKERLE 108 (127)
T ss_dssp -HHHHHHHHT--G----SHHHHHHHHHHHHHHT-CCCTS-------HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCCCcc--CHHHHHHHHHHHHhccCCCcCCC------HHHHHHHHHHHHHHH
Confidence 346888999999977 99999999999999999997653 122234555555543
No 73
>PF13446 RPT: A repeated domain in UCH-protein
Probab=86.59 E-value=1.7 Score=30.53 Aligned_cols=29 Identities=14% Similarity=0.129 Sum_probs=25.7
Q ss_pred CccchhhhcCCCCCCCCCHHHHHHHHHHHHH
Q 026631 169 DMASDRQTLGLCASGPLKLEDVKLAYRVCAL 199 (235)
Q Consensus 169 ~~~d~YeILGL~~~a~~s~~eIKkAYRklal 199 (235)
++...|++|||++.. +.+.|-.+|.....
T Consensus 3 ~~~~Ay~~Lgi~~~~--~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 3 DVEEAYEILGIDEDT--DDDFIISAFQSKVN 31 (62)
T ss_pred CHHHHHHHhCcCCCC--CHHHHHHHHHHHHH
Confidence 346789999999998 99999999988877
No 74
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=78.55 E-value=4.2 Score=32.58 Aligned_cols=47 Identities=30% Similarity=0.329 Sum_probs=36.6
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCC--ChHHHHHHHHHHHHHHHHccCCc
Q 026631 186 KLEDVKLAYRVCALKWHPDRHQGS--SKAVAEEKFKLCSAAYQSLCDKL 232 (235)
Q Consensus 186 s~~eIKkAYRklalk~HPDk~~~~--~~~~a~ekF~~I~eAYevLsDp~ 232 (235)
+..+++.|.|..-++.|||..... .+...++-++.|+.-.+.|..+.
T Consensus 7 ~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~~~ 55 (112)
T PF14687_consen 7 SSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKKRK 55 (112)
T ss_pred hhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhccC
Confidence 678899999999999999976532 23456677888888888887643
No 75
>COG2879 Uncharacterized small protein [Function unknown]
Probab=40.05 E-value=49 Score=24.27 Aligned_cols=28 Identities=36% Similarity=0.450 Sum_probs=22.5
Q ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHHHH
Q 026631 193 AYRVCALKWHPDRHQGSSKAVAEEKFKLCSAA 224 (235)
Q Consensus 193 AYRklalk~HPDk~~~~~~~~a~ekF~~I~eA 224 (235)
.|-+-.++.|||+.+- ..+|.|++++.|
T Consensus 27 nYVehmr~~hPd~p~m----T~~EFfrec~da 54 (65)
T COG2879 27 NYVEHMRKKHPDKPPM----TYEEFFRECQDA 54 (65)
T ss_pred HHHHHHHHhCcCCCcc----cHHHHHHHHHHh
Confidence 5777788999999875 378889988876
No 76
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=37.90 E-value=20 Score=18.35 Aligned_cols=13 Identities=38% Similarity=0.649 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHcc
Q 026631 217 KFKLCSAAYQSLC 229 (235)
Q Consensus 217 kF~~I~eAYevLs 229 (235)
.|..|..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 4778888888774
No 77
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=31.65 E-value=51 Score=20.33 Aligned_cols=18 Identities=33% Similarity=0.510 Sum_probs=15.2
Q ss_pred CHHHHHHHHHHHHHHhCC
Q 026631 186 KLEDVKLAYRVCALKWHP 203 (235)
Q Consensus 186 s~~eIKkAYRklalk~HP 203 (235)
..++.+.+.|+.|+.||-
T Consensus 9 ~~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 9 NKEDKRAQLRQAALEYHE 26 (28)
T ss_pred chHHHHHHHHHHHHHhcc
Confidence 457889999999999993
No 78
>PHA03308 transcriptional regulator ICP4; Provisional
Probab=29.35 E-value=21 Score=37.71 Aligned_cols=16 Identities=50% Similarity=0.717 Sum_probs=11.4
Q ss_pred cchhhhhccccchhhh
Q 026631 16 FINLRAALFHSTPVLE 31 (235)
Q Consensus 16 ~~~~~~a~fhstp~~~ 31 (235)
.+.+.-|+||||||+.
T Consensus 876 ~s~i~~alfhstpvsp 891 (1463)
T PHA03308 876 ISEIGEALFHSTPVSP 891 (1463)
T ss_pred HHHHHHhhhccCCCCc
Confidence 4457778888888764
No 79
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=22.69 E-value=3.1e+02 Score=20.90 Aligned_cols=32 Identities=13% Similarity=0.066 Sum_probs=25.0
Q ss_pred hhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC
Q 026631 174 RQTLGLCASGPLKLEDVKLAYRVCALKWHPDRHQ 207 (235)
Q Consensus 174 YeILGL~~~a~~s~~eIKkAYRklalk~HPDk~~ 207 (235)
-+++|+.+-+ +..||+.|-+..++|..--.++
T Consensus 6 k~LfnfdPPA--T~~EvrdAAlQfVRKlSGtT~P 37 (88)
T COG5552 6 KELFNFDPPA--TPVEVRDAALQFVRKLSGTTHP 37 (88)
T ss_pred HHHhCCCCCC--CcHHHHHHHHHHHHHhcCCCCc
Confidence 4678999999 9999999988888877444333
Done!