Query 026632
Match_columns 235
No_of_seqs 117 out of 1657
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 10:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026632.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026632hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 6.9E-45 1.5E-49 309.1 21.3 224 10-235 222-445 (537)
2 COG0318 CaiC Acyl-CoA syntheta 100.0 7.2E-41 1.6E-45 290.3 21.7 225 10-235 211-438 (534)
3 COG0365 Acs Acyl-coenzyme A sy 100.0 1.5E-40 3.2E-45 281.5 19.7 222 7-235 207-433 (528)
4 PRK06334 long chain fatty acid 100.0 7.8E-40 1.7E-44 284.4 23.5 227 8-235 219-447 (539)
5 KOG1177 Long chain fatty acid 100.0 7.7E-41 1.7E-45 270.5 15.1 228 7-235 269-498 (596)
6 PLN02574 4-coumarate--CoA liga 100.0 3.8E-39 8.3E-44 281.4 22.9 224 12-235 243-467 (560)
7 PF00501 AMP-binding: AMP-bind 100.0 5.2E-39 1.1E-43 270.9 16.5 214 14-227 197-417 (417)
8 PTZ00342 acyl-CoA synthetase; 100.0 2E-38 4.3E-43 282.3 20.4 220 11-235 345-608 (746)
9 PLN02246 4-coumarate--CoA liga 100.0 1.6E-37 3.5E-42 269.9 23.6 228 8-235 219-449 (537)
10 PLN02614 long-chain acyl-CoA s 100.0 2.7E-38 5.7E-43 280.5 18.9 221 10-235 266-534 (666)
11 PLN02654 acetate-CoA ligase 100.0 5.7E-38 1.2E-42 278.6 20.9 228 7-235 311-550 (666)
12 COG1022 FAA1 Long-chain acyl-C 100.0 2.4E-38 5.2E-43 271.5 16.7 209 10-235 230-487 (613)
13 PLN02860 o-succinylbenzoate-Co 100.0 1.7E-37 3.7E-42 271.1 21.4 221 8-235 208-451 (563)
14 PRK08314 long-chain-fatty-acid 100.0 5.3E-37 1.1E-41 267.1 22.2 226 7-235 225-453 (546)
15 PRK13295 cyclohexanecarboxylat 100.0 8E-37 1.7E-41 266.1 23.2 223 9-235 234-456 (547)
16 PLN02736 long-chain acyl-CoA s 100.0 1.6E-37 3.5E-42 275.4 18.5 223 8-235 257-525 (651)
17 PRK07788 acyl-CoA synthetase; 100.0 6.4E-37 1.4E-41 266.8 21.9 220 8-235 243-464 (549)
18 PRK06839 acyl-CoA synthetase; 100.0 6.9E-37 1.5E-41 263.3 21.8 223 9-235 186-408 (496)
19 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 8.5E-37 1.8E-41 269.8 22.5 227 8-235 273-512 (625)
20 PRK08633 2-acyl-glycerophospho 100.0 6.6E-37 1.4E-41 286.4 21.9 226 8-235 818-1056(1146)
21 PTZ00237 acetyl-CoA synthetase 100.0 5.8E-37 1.3E-41 271.4 20.3 222 10-235 293-529 (647)
22 PRK06145 acyl-CoA synthetase; 100.0 1.4E-36 3.1E-41 261.6 21.7 225 9-235 186-410 (497)
23 PRK07656 long-chain-fatty-acid 100.0 1.4E-36 3.1E-41 262.3 21.5 228 7-235 201-429 (513)
24 TIGR02316 propion_prpE propion 100.0 1.3E-36 2.8E-41 268.7 21.5 227 8-235 269-509 (628)
25 PLN02861 long-chain-fatty-acid 100.0 3.9E-37 8.4E-42 273.0 18.2 220 11-235 264-531 (660)
26 PRK00174 acetyl-CoA synthetase 100.0 2.4E-36 5.2E-41 267.4 23.1 227 8-235 282-520 (637)
27 PRK07529 AMP-binding domain pr 100.0 3.6E-36 7.8E-41 265.9 23.7 224 8-235 249-482 (632)
28 PRK08316 acyl-CoA synthetase; 100.0 1.8E-36 3.9E-41 262.2 21.3 225 9-235 208-432 (523)
29 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.5E-36 7.6E-41 261.6 22.7 223 9-235 232-454 (538)
30 PRK08315 AMP-binding domain pr 100.0 3.6E-36 7.8E-41 262.6 22.0 228 8-235 235-464 (559)
31 PLN02330 4-coumarate--CoA liga 100.0 2.9E-36 6.4E-41 262.5 21.3 223 13-235 227-454 (546)
32 PRK05677 long-chain-fatty-acid 100.0 6.1E-36 1.3E-40 261.3 22.3 219 13-235 251-470 (562)
33 PRK04319 acetyl-CoA synthetase 100.0 4.4E-36 9.6E-41 262.6 21.3 224 8-235 241-469 (570)
34 PLN03051 acyl-activating enzym 100.0 4.1E-36 8.8E-41 259.0 20.7 224 8-235 155-394 (499)
35 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 7.3E-36 1.6E-40 259.0 22.2 225 8-235 219-445 (527)
36 PRK05605 long-chain-fatty-acid 100.0 6.3E-36 1.4E-40 261.8 21.7 221 12-235 261-482 (573)
37 PRK07638 acyl-CoA synthetase; 100.0 8E-36 1.7E-40 256.4 21.8 220 8-235 179-398 (487)
38 PRK07514 malonyl-CoA synthase; 100.0 6.4E-36 1.4E-40 257.9 20.9 223 8-235 192-414 (504)
39 PRK12583 acyl-CoA synthetase; 100.0 1.6E-35 3.5E-40 258.4 22.5 227 8-235 237-465 (558)
40 PRK07787 acyl-CoA synthetase; 100.0 1.3E-35 2.7E-40 254.3 20.8 222 8-235 164-388 (471)
41 PRK06060 acyl-CoA synthetase; 100.0 1.5E-35 3.2E-40 265.1 21.5 220 8-235 182-402 (705)
42 PRK06087 short chain acyl-CoA 100.0 1.5E-35 3.2E-40 258.1 20.6 225 8-235 223-447 (547)
43 PRK03640 O-succinylbenzoic aci 100.0 2.2E-35 4.9E-40 253.2 21.0 221 8-235 177-397 (483)
44 PRK09274 peptide synthase; Pro 100.0 2.3E-35 5E-40 257.2 21.2 220 8-235 210-457 (552)
45 PRK13382 acyl-CoA synthetase; 100.0 3.4E-35 7.3E-40 255.4 22.2 218 10-235 234-453 (537)
46 PRK06710 long-chain-fatty-acid 100.0 2.5E-35 5.4E-40 257.6 21.3 221 12-235 248-468 (563)
47 PRK07786 long-chain-fatty-acid 100.0 3.4E-35 7.3E-40 255.7 21.7 221 11-235 214-436 (542)
48 PRK09088 acyl-CoA synthetase; 100.0 5.9E-35 1.3E-39 251.0 22.8 223 10-235 173-398 (488)
49 PRK12492 long-chain-fatty-acid 100.0 6E-35 1.3E-39 255.1 22.7 220 13-235 258-478 (562)
50 KOG1256 Long-chain acyl-CoA sy 100.0 1E-35 2.2E-40 253.2 17.2 218 13-235 302-565 (691)
51 PRK10524 prpE propionyl-CoA sy 100.0 3.1E-35 6.6E-40 260.1 20.4 227 8-235 270-510 (629)
52 PRK06188 acyl-CoA synthetase; 100.0 4.8E-35 1E-39 253.7 20.5 223 8-235 204-430 (524)
53 TIGR01733 AA-adenyl-dom amino 100.0 8.4E-35 1.8E-39 244.5 21.4 223 8-235 156-392 (408)
54 COG1021 EntE Peptide arylation 100.0 2.8E-36 6.2E-41 239.4 10.9 228 5-235 222-451 (542)
55 PRK10946 entE enterobactin syn 100.0 8.1E-35 1.7E-39 253.0 20.7 226 7-235 217-446 (536)
56 PRK07769 long-chain-fatty-acid 100.0 2.4E-35 5.3E-40 260.8 16.8 226 8-235 216-500 (631)
57 PRK06164 acyl-CoA synthetase; 100.0 1.1E-34 2.4E-39 252.3 20.2 223 9-235 218-443 (540)
58 PRK05857 acyl-CoA synthetase; 100.0 9.8E-35 2.1E-39 252.7 19.9 221 10-235 211-439 (540)
59 PRK05852 acyl-CoA synthetase; 100.0 1.9E-34 4.1E-39 250.6 21.5 224 8-235 212-445 (534)
60 PRK06187 long-chain-fatty-acid 100.0 1.4E-34 3.1E-39 250.1 20.7 224 7-234 202-431 (521)
61 PLN02387 long-chain-fatty-acid 100.0 5E-35 1.1E-39 260.7 18.3 222 10-235 289-573 (696)
62 PTZ00216 acyl-CoA synthetase; 100.0 4.6E-35 1E-39 261.3 17.8 217 11-235 308-574 (700)
63 PRK13383 acyl-CoA synthetase; 100.0 2.8E-34 6.2E-39 248.5 21.6 219 9-235 213-433 (516)
64 TIGR02262 benz_CoA_lig benzoat 100.0 2.5E-34 5.3E-39 248.4 21.2 223 8-235 198-421 (508)
65 PRK07059 Long-chain-fatty-acid 100.0 3.1E-34 6.7E-39 250.4 21.7 220 13-235 252-472 (557)
66 PRK13390 acyl-CoA synthetase; 100.0 2.4E-34 5.1E-39 248.1 20.6 223 8-235 190-416 (501)
67 TIGR03205 pimA dicarboxylate-- 100.0 3.8E-34 8.2E-39 249.0 21.8 220 13-235 238-458 (541)
68 PRK08043 bifunctional acyl-[ac 100.0 3.2E-34 6.9E-39 256.8 21.6 218 8-235 401-628 (718)
69 PRK06155 crotonobetaine/carnit 100.0 5.1E-34 1.1E-38 248.2 22.2 219 8-235 216-437 (542)
70 TIGR03098 ligase_PEP_1 acyl-Co 100.0 4.2E-34 9.1E-39 247.1 21.5 223 9-235 198-431 (515)
71 PRK06178 acyl-CoA synthetase; 100.0 7.1E-34 1.5E-38 248.6 22.7 225 9-235 247-479 (567)
72 PRK07470 acyl-CoA synthetase; 100.0 3.8E-34 8.3E-39 248.3 20.2 221 10-235 203-431 (528)
73 TIGR03443 alpha_am_amid L-amin 100.0 1.9E-34 4.2E-39 274.0 19.8 225 7-235 450-715 (1389)
74 PLN02430 long-chain-fatty-acid 100.0 2.6E-34 5.7E-39 254.8 19.4 221 10-235 263-531 (660)
75 PRK12406 long-chain-fatty-acid 100.0 7.8E-34 1.7E-38 245.3 21.8 224 7-235 190-416 (509)
76 PRK05851 long-chain-fatty-acid 100.0 1.4E-34 3E-39 250.9 17.1 220 9-235 189-432 (525)
77 PRK08008 caiC putative crotono 100.0 1.2E-33 2.6E-38 244.6 21.9 222 10-235 211-435 (517)
78 PRK08180 feruloyl-CoA synthase 100.0 5.4E-34 1.2E-38 251.4 19.7 212 12-233 251-480 (614)
79 PRK12467 peptide synthase; Pro 100.0 2.9E-34 6.2E-39 289.9 20.0 225 7-235 3272-3508(3956)
80 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.6E-33 3.4E-38 242.9 21.5 225 8-235 177-410 (502)
81 PRK12316 peptide synthase; Pro 100.0 6.2E-34 1.3E-38 291.3 21.0 225 7-235 690-923 (5163)
82 PRK13391 acyl-CoA synthetase; 100.0 3E-33 6.5E-38 241.8 22.2 220 10-235 197-419 (511)
83 PRK10252 entF enterobactin syn 100.0 1.2E-33 2.5E-38 267.4 21.2 226 7-235 633-874 (1296)
84 PRK08276 long-chain-fatty-acid 100.0 2.2E-33 4.7E-38 242.1 21.1 220 11-235 185-406 (502)
85 PRK12476 putative fatty-acid-- 100.0 3.3E-34 7.2E-39 252.7 15.8 224 10-235 232-512 (612)
86 PRK07008 long-chain-fatty-acid 100.0 3.3E-33 7.2E-38 243.1 21.6 222 7-235 213-446 (539)
87 PRK12582 acyl-CoA synthetase; 100.0 9.2E-34 2E-38 250.4 18.3 212 13-234 264-493 (624)
88 PRK08751 putative long-chain f 100.0 2.8E-33 6.1E-38 244.5 21.0 220 13-235 254-474 (560)
89 KOG1175 Acyl-CoA synthetase [L 100.0 1.2E-33 2.6E-38 240.7 17.3 232 3-235 271-512 (626)
90 PRK07867 acyl-CoA synthetase; 100.0 7.1E-33 1.5E-37 240.4 22.4 218 8-235 188-418 (529)
91 PRK08974 long-chain-fatty-acid 100.0 1E-32 2.2E-37 241.1 22.2 221 11-235 248-469 (560)
92 PRK12316 peptide synthase; Pro 100.0 2.7E-33 5.9E-38 286.6 21.0 226 7-235 4729-4966(5163)
93 PRK12467 peptide synthase; Pro 100.0 3.4E-33 7.3E-38 282.2 21.2 226 7-235 1753-1991(3956)
94 PRK04813 D-alanine--poly(phosp 100.0 1.3E-32 2.9E-37 237.0 20.8 225 8-235 179-412 (503)
95 PRK05691 peptide synthase; Val 100.0 8.7E-33 1.9E-37 281.0 21.7 225 7-235 1308-1542(4334)
96 PRK03584 acetoacetyl-CoA synth 100.0 2.1E-32 4.6E-37 243.0 21.2 224 7-235 299-535 (655)
97 PLN03102 acyl-activating enzym 100.0 2.4E-32 5.2E-37 239.5 20.3 219 11-235 225-457 (579)
98 PRK05620 long-chain-fatty-acid 100.0 3.8E-32 8.2E-37 238.1 20.8 224 8-235 219-467 (576)
99 PRK07868 acyl-CoA synthetase; 100.0 2.4E-32 5.3E-37 251.1 20.1 217 8-235 641-873 (994)
100 PRK06814 acylglycerophosphoeth 100.0 6E-32 1.3E-36 253.0 23.1 218 8-235 829-1047(1140)
101 PRK13388 acyl-CoA synthetase; 100.0 5.9E-32 1.3E-36 235.3 21.1 220 7-235 185-417 (540)
102 PRK07445 O-succinylbenzoic aci 100.0 3.4E-32 7.3E-37 231.8 18.4 203 12-235 159-361 (452)
103 TIGR01217 ac_ac_CoA_syn acetoa 100.0 7.4E-32 1.6E-36 239.1 20.9 223 8-235 301-536 (652)
104 PLN02479 acetate-CoA ligase 100.0 8.7E-32 1.9E-36 235.5 20.7 223 9-235 232-467 (567)
105 PLN03052 acetate--CoA ligase; 100.0 1.5E-31 3.3E-36 239.0 22.0 224 8-235 392-626 (728)
106 PRK06018 putative acyl-CoA syn 100.0 1.9E-31 4.1E-36 232.2 22.1 220 9-235 216-447 (542)
107 PRK05850 acyl-CoA synthetase; 100.0 6.1E-32 1.3E-36 236.9 17.7 222 11-235 205-473 (578)
108 PRK05691 peptide synthase; Val 100.0 1E-31 2.3E-36 273.2 21.1 225 6-235 3903-4139(4334)
109 TIGR01923 menE O-succinylbenzo 100.0 2.4E-31 5.3E-36 225.5 19.4 211 7-234 146-356 (436)
110 PRK08279 long-chain-acyl-CoA s 100.0 4.2E-31 9.1E-36 232.6 19.8 220 8-235 235-476 (600)
111 PRK08162 acyl-CoA synthetase; 100.0 2.4E-30 5.2E-35 225.3 21.1 222 10-235 220-453 (545)
112 PRK09192 acyl-CoA synthetase; 100.0 6.7E-31 1.5E-35 230.4 17.2 226 7-235 212-475 (579)
113 PRK07768 long-chain-fatty-acid 100.0 2.2E-30 4.9E-35 225.6 19.7 220 14-235 195-451 (545)
114 PRK07798 acyl-CoA synthetase; 100.0 1.6E-29 3.6E-34 219.2 22.6 218 11-235 217-445 (533)
115 PRK09029 O-succinylbenzoic aci 100.0 2.9E-29 6.2E-34 214.3 18.5 198 8-235 171-368 (458)
116 PRK08308 acyl-CoA synthetase; 100.0 6.8E-29 1.5E-33 209.4 19.9 192 8-235 137-328 (414)
117 KOG1180 Acyl-CoA synthetase [L 100.0 5.4E-30 1.2E-34 211.0 10.7 222 9-234 275-552 (678)
118 PRK07824 O-succinylbenzoic aci 100.0 3.9E-28 8.4E-33 201.1 20.6 193 12-235 73-270 (358)
119 TIGR02155 PA_CoA_ligase phenyl 100.0 4.7E-28 1E-32 204.8 18.5 209 9-235 115-332 (422)
120 KOG1179 Very long-chain acyl-C 99.9 1.4E-26 3E-31 191.5 18.5 228 6-235 276-525 (649)
121 TIGR03335 F390_ftsA coenzyme F 99.9 1.4E-23 3E-28 178.3 18.5 207 9-234 126-343 (445)
122 TIGR02372 4_coum_CoA_lig 4-cou 99.9 1.3E-23 2.8E-28 175.0 16.6 174 14-235 139-312 (386)
123 COG1541 PaaK Coenzyme F390 syn 99.9 9.7E-23 2.1E-27 167.4 17.2 207 9-234 130-347 (438)
124 COG1020 EntF Non-ribosomal pep 99.9 1.4E-21 3E-26 173.5 19.4 226 7-234 401-632 (642)
125 PTZ00297 pantothenate kinase; 99.7 1.9E-16 4E-21 148.5 14.1 185 11-234 643-873 (1452)
126 TIGR02304 aden_form_hyp probab 99.6 1.6E-14 3.5E-19 121.3 13.1 151 49-231 175-340 (430)
127 KOG3628 Predicted AMP-binding 99.1 3.8E-09 8.3E-14 94.6 13.7 225 9-234 980-1265(1363)
128 PF04443 LuxE: Acyl-protein sy 99.1 1.9E-08 4E-13 83.1 16.7 164 35-222 161-350 (365)
129 KOG1178 Non-ribosomal peptide 98.9 1.8E-08 4E-13 91.7 11.8 201 33-235 257-491 (1032)
130 KOG3628 Predicted AMP-binding 98.7 1.1E-07 2.3E-12 85.7 10.9 218 11-228 308-601 (1363)
131 TIGR03089 conserved hypothetic 98.4 4.5E-07 9.8E-12 70.5 5.6 56 7-63 172-227 (227)
132 PRK09188 serine/threonine prot 98.1 2.4E-06 5.3E-11 70.7 4.1 34 196-234 207-244 (365)
133 PF03321 GH3: GH3 auxin-respon 98.0 3.1E-05 6.6E-10 67.6 8.9 124 86-233 266-408 (528)
134 PLN02249 indole-3-acetic acid- 98.0 0.00029 6.3E-09 62.1 14.2 126 86-233 301-447 (597)
135 PLN02247 indole-3-acetic acid- 97.8 0.00053 1.2E-08 60.2 12.2 128 87-234 293-455 (606)
136 PLN02620 indole-3-acetic acid- 97.7 0.00097 2.1E-08 58.6 12.3 129 86-234 303-461 (612)
137 TIGR02370 pyl_corrinoid methyl 86.6 11 0.00023 28.6 9.4 90 14-105 85-183 (197)
138 PRK02261 methylaspartate mutas 84.5 8.4 0.00018 27.3 7.4 47 23-69 15-62 (137)
139 cd02069 methionine_synthase_B1 69.3 48 0.001 25.5 8.2 90 14-107 90-187 (213)
140 cd02070 corrinoid_protein_B12- 65.6 12 0.00026 28.4 4.3 88 14-103 84-179 (201)
141 PF03808 Glyco_tran_WecB: Glyc 62.5 16 0.00035 27.0 4.3 77 37-119 3-80 (172)
142 PLN02736 long-chain acyl-CoA s 53.3 1.5E+02 0.0033 26.9 9.8 80 9-94 99-179 (651)
143 PF00455 DeoRC: DeoR C termina 50.7 95 0.0021 22.6 7.9 88 33-128 14-109 (161)
144 PF11142 DUF2917: Protein of u 50.4 54 0.0012 19.7 5.5 34 170-218 25-58 (63)
145 TIGR01501 MthylAspMutase methy 49.4 92 0.002 22.0 8.1 79 23-105 13-100 (134)
146 PRK10411 DNA-binding transcrip 48.9 1.2E+02 0.0027 23.7 7.5 90 33-130 88-184 (240)
147 PF00818 Ice_nucleation: Ice n 48.4 7.5 0.00016 16.4 0.3 9 119-127 1-9 (16)
148 PLN02387 long-chain-fatty-acid 46.0 2E+02 0.0044 26.4 9.5 82 9-96 127-209 (696)
149 COG2351 Transthyretin-like pro 44.8 50 0.0011 22.8 4.0 17 143-159 19-35 (124)
150 PF00501 AMP-binding: AMP-bind 41.5 1.2E+02 0.0027 25.2 7.0 57 9-67 42-99 (417)
151 PRK07788 acyl-CoA synthetase; 41.4 1.9E+02 0.0041 25.4 8.4 64 10-75 96-160 (549)
152 TIGR01733 AA-adenyl-dom amino 41.0 1.3E+02 0.0028 25.0 7.0 64 10-75 22-86 (408)
153 PRK04319 acetyl-CoA synthetase 40.7 2E+02 0.0042 25.5 8.4 63 10-74 95-158 (570)
154 TIGR03098 ligase_PEP_1 acyl-Co 40.5 1.7E+02 0.0037 25.2 7.9 62 10-73 47-109 (515)
155 PRK06155 crotonobetaine/carnit 40.4 2.1E+02 0.0046 25.2 8.5 66 9-76 67-133 (542)
156 KOG1177 Long chain fatty acid 39.7 2.2E+02 0.0047 25.3 7.8 88 7-96 96-198 (596)
157 PF06543 Lac_bphage_repr: Lact 39.7 26 0.00056 19.7 1.7 23 90-112 22-44 (49)
158 COG5012 Predicted cobalamin bi 39.2 1.8E+02 0.004 22.6 8.2 83 22-107 115-205 (227)
159 PRK08316 acyl-CoA synthetase; 39.2 1.8E+02 0.004 25.1 7.9 65 9-75 57-122 (523)
160 PTZ00237 acetyl-CoA synthetase 39.1 1.2E+02 0.0026 27.6 6.8 59 9-69 113-172 (647)
161 PRK08008 caiC putative crotono 39.1 2.4E+02 0.0052 24.4 8.6 63 9-73 58-121 (517)
162 PLN03102 acyl-activating enzym 38.3 2.1E+02 0.0045 25.5 8.2 62 9-72 60-122 (579)
163 PLN02654 acetate-CoA ligase 38.3 1.3E+02 0.0029 27.4 7.0 60 9-70 141-201 (666)
164 PRK05605 long-chain-fatty-acid 37.4 2.3E+02 0.0049 25.1 8.3 63 10-74 79-142 (573)
165 PRK06187 long-chain-fatty-acid 37.2 2.4E+02 0.0052 24.3 8.3 63 10-74 53-116 (521)
166 PRK06334 long chain fatty acid 37.0 1.9E+02 0.004 25.5 7.6 62 11-74 65-127 (539)
167 cd02071 MM_CoA_mut_B12_BD meth 36.8 1.4E+02 0.003 20.4 7.8 83 23-110 11-101 (122)
168 COG1922 WecG Teichoic acid bio 36.6 1.9E+02 0.0042 23.0 6.7 81 32-117 57-138 (253)
169 PF02310 B12-binding: B12 bind 35.9 1.3E+02 0.0029 20.1 6.2 47 22-69 11-59 (121)
170 PRK08751 putative long-chain f 35.6 2.1E+02 0.0046 25.2 7.8 63 8-72 71-134 (560)
171 PRK07514 malonyl-CoA synthase; 35.0 2.2E+02 0.0047 24.5 7.7 63 9-73 49-112 (504)
172 PF04915 DltD_N: DltD N-termin 34.9 18 0.0004 21.7 0.7 15 112-126 26-40 (62)
173 TIGR01217 ac_ac_CoA_syn acetoa 34.1 1.6E+02 0.0034 26.8 6.8 59 9-69 135-194 (652)
174 PRK07656 long-chain-fatty-acid 33.9 2.9E+02 0.0063 23.8 8.3 63 9-73 51-114 (513)
175 PRK13383 acyl-CoA synthetase; 33.7 2.9E+02 0.0063 24.0 8.2 65 9-75 81-146 (516)
176 PRK03584 acetoacetyl-CoA synth 32.6 2E+02 0.0043 26.1 7.2 59 9-69 135-194 (655)
177 TIGR02316 propion_prpE propion 32.6 1.9E+02 0.004 26.1 7.0 59 9-69 104-163 (628)
178 COG0365 Acs Acyl-coenzyme A sy 32.6 1.9E+02 0.0042 25.8 6.8 60 12-73 64-124 (528)
179 PRK08314 long-chain-fatty-acid 32.5 2.8E+02 0.0062 24.2 8.0 65 9-75 57-122 (546)
180 PRK05718 keto-hydroxyglutarate 32.2 2.4E+02 0.0051 21.7 8.1 85 32-124 80-166 (212)
181 PRK05850 acyl-CoA synthetase; 32.1 2.3E+02 0.005 25.1 7.5 63 11-75 57-123 (578)
182 PRK10524 prpE propionyl-CoA sy 31.9 1.8E+02 0.0039 26.1 6.8 59 9-69 105-164 (629)
183 PF05452 Clavanin: Clavanin; 31.9 20 0.00043 21.7 0.5 8 197-204 72-79 (80)
184 TIGR02188 Ac_CoA_lig_AcsA acet 31.5 1.7E+02 0.0037 26.3 6.6 59 9-69 109-168 (625)
185 PRK05677 long-chain-fatty-acid 31.5 2.8E+02 0.006 24.5 7.8 61 9-71 71-132 (562)
186 PRK06839 acyl-CoA synthetase; 31.3 3.4E+02 0.0073 23.3 8.7 64 9-74 49-113 (496)
187 PLN02574 4-coumarate--CoA liga 30.5 3.2E+02 0.007 24.1 8.1 66 8-75 87-153 (560)
188 TIGR00696 wecB_tagA_cpsF bacte 30.5 1.3E+02 0.0028 22.4 4.7 45 68-117 33-78 (177)
189 PRK09274 peptide synthase; Pro 30.4 2.3E+02 0.005 24.8 7.2 59 9-69 62-121 (552)
190 PLN02246 4-coumarate--CoA liga 30.0 2.9E+02 0.0064 24.1 7.7 63 9-73 71-134 (537)
191 PRK08162 acyl-CoA synthetase; 29.8 2.9E+02 0.0064 24.1 7.7 64 9-74 64-128 (545)
192 cd04910 ACT_AK-Ectoine_1 ACT d 29.7 1.4E+02 0.0031 18.5 4.3 51 51-116 19-69 (71)
193 PLN03052 acetate--CoA ligase; 29.2 2.3E+02 0.005 26.3 7.1 60 9-70 229-289 (728)
194 PLN02614 long-chain acyl-CoA s 28.9 3.7E+02 0.0081 24.6 8.3 65 9-75 100-165 (666)
195 PLN02861 long-chain-fatty-acid 27.5 4.7E+02 0.01 23.8 8.7 65 9-75 98-163 (660)
196 cd06533 Glyco_transf_WecG_TagA 27.4 1.4E+02 0.0029 22.0 4.4 73 39-117 3-76 (171)
197 PRK12406 long-chain-fatty-acid 27.1 3.6E+02 0.0078 23.3 7.7 64 10-75 33-97 (509)
198 PRK13388 acyl-CoA synthetase; 26.8 3.7E+02 0.0081 23.6 7.8 60 11-72 50-110 (540)
199 PLN02860 o-succinylbenzoate-Co 26.5 2.9E+02 0.0063 24.4 7.1 59 9-69 53-112 (563)
200 PF04723 GRDA: Glycine reducta 26.4 95 0.0021 22.1 3.1 27 99-128 17-43 (150)
201 PF08789 PBCV_basic_adap: PBCV 26.4 1.1E+02 0.0023 16.7 2.6 27 207-233 3-31 (40)
202 PRK06087 short chain acyl-CoA 26.4 2.9E+02 0.0062 24.2 7.0 58 9-68 70-128 (547)
203 PRK12476 putative fatty-acid-- 26.2 4.5E+02 0.0098 23.6 8.3 62 10-73 89-154 (612)
204 cd07080 ALDH_Acyl-CoA-Red_LuxC 26.1 3.2E+02 0.0069 23.5 7.0 51 12-62 112-166 (422)
205 PRK08279 long-chain-acyl-CoA s 26.1 4.7E+02 0.01 23.3 8.5 64 9-74 83-147 (600)
206 PTZ00342 acyl-CoA synthetase; 26.0 5.5E+02 0.012 24.1 9.9 77 14-96 131-208 (746)
207 PRK05620 long-chain-fatty-acid 26.0 4.2E+02 0.009 23.5 8.0 65 9-75 60-125 (576)
208 PRK09490 metH B12-dependent me 25.8 3.7E+02 0.008 27.0 7.9 86 14-103 753-846 (1229)
209 PRK05857 acyl-CoA synthetase; 25.6 3E+02 0.0065 24.2 7.0 60 9-70 62-122 (540)
210 PRK00174 acetyl-CoA synthetase 25.4 2.8E+02 0.0062 25.0 6.9 59 9-69 119-178 (637)
211 TIGR01923 menE O-succinylbenzo 25.3 3.5E+02 0.0076 22.6 7.2 59 10-70 21-80 (436)
212 PRK13295 cyclohexanecarboxylat 25.1 3.2E+02 0.0069 24.0 7.1 59 9-69 76-135 (547)
213 PRK07059 Long-chain-fatty-acid 24.6 4.9E+02 0.011 22.9 8.2 61 9-71 69-130 (557)
214 PRK08276 long-chain-fatty-acid 24.3 4.4E+02 0.0096 22.7 7.8 63 10-74 33-96 (502)
215 TIGR02082 metH 5-methyltetrahy 24.1 5.1E+02 0.011 25.9 8.4 89 14-106 734-830 (1178)
216 TIGR00640 acid_CoA_mut_C methy 23.9 2.6E+02 0.0057 19.6 7.7 84 22-110 13-104 (132)
217 cd02072 Glm_B12_BD B12 binding 23.7 2.7E+02 0.0057 19.6 8.5 80 23-106 11-99 (128)
218 KOG1176 Acyl-CoA synthetase [L 23.6 3.7E+02 0.0081 24.1 7.0 64 10-75 69-133 (537)
219 PRK12583 acyl-CoA synthetase; 23.5 3.7E+02 0.008 23.5 7.2 59 10-70 67-126 (558)
220 PRK06178 acyl-CoA synthetase; 22.9 4.9E+02 0.011 22.9 7.9 64 10-75 80-144 (567)
221 PRK09088 acyl-CoA synthetase; 22.9 4.1E+02 0.0088 22.8 7.2 58 10-69 44-102 (488)
222 PRK08315 AMP-binding domain pr 22.8 3.7E+02 0.008 23.6 7.0 60 9-70 64-124 (559)
223 PRK07867 acyl-CoA synthetase; 22.7 5.2E+02 0.011 22.6 8.5 61 11-73 52-113 (529)
224 PRK07529 AMP-binding domain pr 22.6 3.4E+02 0.0073 24.5 6.8 58 9-68 79-136 (632)
225 cd07124 ALDH_PutA-P5CDH-RocA D 22.4 5.4E+02 0.012 22.8 7.9 46 14-59 168-218 (512)
226 cd02067 B12-binding B12 bindin 22.4 2.5E+02 0.0054 18.8 8.6 48 22-70 10-59 (119)
227 PRK08974 long-chain-fatty-acid 22.4 4.2E+02 0.0091 23.3 7.3 60 9-70 70-130 (560)
228 PRK12492 long-chain-fatty-acid 22.4 4E+02 0.0086 23.5 7.1 60 9-70 71-131 (562)
229 PF10411 DsbC_N: Disulfide bon 22.3 98 0.0021 18.0 2.3 17 203-219 33-49 (57)
230 PRK09802 DNA-binding transcrip 22.1 4.1E+02 0.009 21.2 7.6 86 36-129 104-197 (269)
231 PRK06164 acyl-CoA synthetase; 22.0 3.7E+02 0.008 23.5 6.8 60 9-70 56-116 (540)
232 PLN02479 acetate-CoA ligase 22.0 5.6E+02 0.012 22.7 8.5 61 9-71 66-127 (567)
233 PRK06018 putative acyl-CoA syn 21.8 3.7E+02 0.0079 23.6 6.8 61 9-71 60-121 (542)
234 PRK04306 50S ribosomal protein 21.5 1.1E+02 0.0024 20.3 2.6 30 200-229 35-71 (98)
235 PF03744 BioW: 6-carboxyhexano 21.4 1.8E+02 0.0038 22.9 4.1 11 165-175 171-181 (239)
236 PRK06188 acyl-CoA synthetase; 21.3 4.6E+02 0.01 22.7 7.3 59 10-70 59-118 (524)
237 COG2875 CobM Precorrin-4 methy 21.1 72 0.0016 25.0 1.9 34 87-123 27-60 (254)
238 PLN02430 long-chain-fatty-acid 21.1 6.4E+02 0.014 23.0 8.6 65 9-75 97-162 (660)
239 PF04016 DUF364: Domain of unk 20.7 68 0.0015 23.0 1.6 40 85-124 59-98 (147)
240 KOG1257 NADP+-dependent malic 20.2 1.8E+02 0.004 25.8 4.3 55 49-103 377-457 (582)
241 PF06183 DinI: DinI-like famil 20.1 50 0.0011 20.1 0.7 26 98-123 8-33 (65)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=6.9e-45 Score=309.07 Aligned_cols=224 Identities=50% Similarity=0.842 Sum_probs=207.2
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCc
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSL 89 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~l 89 (235)
....|+.++.+|++|.+|++..+.+.+..|++++..+.++++.+++.+++|++|++.++|+++..|++.+.....+++++
T Consensus 222 ~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl 301 (537)
T KOG1176|consen 222 LTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSL 301 (537)
T ss_pred CCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCcc
Confidence 34479999999999999997777778888888888889999999999999999999999999999999986677789999
Q ss_pred eEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCc
Q 026632 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQL 169 (235)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~ 169 (235)
|.+..||+++++++.+++++.+|+..+.+.||+||+++.++.+...+. .+.+++|++++++...+.+ ++|+.+++++.
T Consensus 302 ~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~ 379 (537)
T KOG1176|consen 302 RSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQT 379 (537)
T ss_pred EEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc-CcccccCccccceEEEeeC-CCCCCCCCCCc
Confidence 999999999999999999999998999999999999987777665533 6889999999988887777 69999999999
Q ss_pred eEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 170 GEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 170 Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
||||++|+.++.||+++|+.|++.|+.+||++|||+|++|+||+++|++|.||+||.+|++|+|.|
T Consensus 380 GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~E 445 (537)
T KOG1176|consen 380 GEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAE 445 (537)
T ss_pred eEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHH
Confidence 999999999999999999999999977799999999999999999999999999999999999975
No 2
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.2e-41 Score=290.26 Aligned_cols=225 Identities=43% Similarity=0.663 Sum_probs=201.3
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
..++|++++++|++|.+|+...+..+++.|+++++.+ ++++..++..+.++++|++.++|+++..+++........+.
T Consensus 211 ~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~ 290 (534)
T COG0318 211 LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLS 290 (534)
T ss_pred CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccc
Confidence 5677999999999999999878888899999999998 59999999999999999999999999999998877766666
Q ss_pred C-ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 88 S-LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 88 ~-lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+ +|.++.||+++++++++++.+.|+...+++.||+||++++++...........+..|.|+|+++++++|++++++++
T Consensus 291 ~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p- 369 (534)
T COG0318 291 SSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP- 369 (534)
T ss_pred cceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-
Confidence 5 99999999999999999999999866899999999999877765544201345667999999999999987776666
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|++|||+++||+++.||+++|+.+.+.|..+|||+|||+|++|++|+++|.||.||+|+.+|++|+|+|
T Consensus 370 g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~e 438 (534)
T COG0318 370 GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEE 438 (534)
T ss_pred CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHH
Confidence 999999999999999999999999997744699999999999999999999999999999999999974
No 3
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.5e-40 Score=281.46 Aligned_cols=222 Identities=28% Similarity=0.363 Sum_probs=199.8
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC--C-CHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F-DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~--~-~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|++++..++.|++|++..++.+|.+|+++++.+. + +++.+++.++++++|.++.+|+.++.|.+....+.
T Consensus 207 ~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~ 286 (528)
T COG0365 207 HGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEP 286 (528)
T ss_pred hhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCccc
Confidence 34556889999999999999999999999999999999863 2 49999999999999999999999999999877666
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
.++++||.+.+.|||++++.++++.+.++ +.+.+.||+||++.+...... +.+.++.|.|+|++++.++|++ |++
T Consensus 287 ~dlssLr~~~SaGEPLnpe~~~w~~~~~g-~~i~d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~-g~~ 361 (528)
T COG0365 287 YDLSSLRVLGSAGEPLNPEAFEWFYSALG-VWILDIYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDE-GNP 361 (528)
T ss_pred ccchhheeeeccCCCCCHHHHHHHHHHhC-CCEeccccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCC-CCc
Confidence 78999999999999999999999999998 999999999999955554332 3345566999999999999976 999
Q ss_pred CCCCCceEEEEEcC--cccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGP--NMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~--~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|+ |+|+++.| +++.+||++|+.+.+.+... ||.|||.+++|+||+++|.||.||+||++|++|.|.|
T Consensus 362 ~~~~~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~E 433 (528)
T COG0365 362 VPPGV-GELVVRLPWPGMALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLE 433 (528)
T ss_pred CCCCc-eEEEEeCCCchhhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHH
Confidence 99999 99999986 99999999999999988444 9999999999999999999999999999999999864
No 4
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.8e-40 Score=284.44 Aligned_cols=227 Identities=26% Similarity=0.419 Sum_probs=198.4
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++++|++|.+|+...++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..+++........+
T Consensus 219 ~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 298 (539)
T PRK06334 219 FSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCL 298 (539)
T ss_pred cCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhccccc
Confidence 345667999999999999999777889999999998875 5799999999999999999999999999988765555678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.||+++++++.+++.+.|++..+++.||+||++.++...... .......+|+|+++++++++|++++++++.
T Consensus 299 ~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~ 377 (539)
T PRK06334 299 PSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITINTVN-SPKHESCVGMPIRGMDVLIVSEETKVPVSS 377 (539)
T ss_pred ccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEeccCC-CCCCCCcCceecCCCEEEEEcCCCCccCCC
Confidence 8999999999999999999999999778999999999998766643322 123345789999999999999878899999
Q ss_pred CCceEEEEEcCcccccccCCcccccccc-cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTI-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~-~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||+++|+.++.||+++++.+.... ..++||+|||+|+++++|++++.||.||+||++|++|+|.|
T Consensus 378 g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~e 447 (539)
T PRK06334 378 GETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEA 447 (539)
T ss_pred CceEEEEEecCcccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHH
Confidence 9999999999999999999988654322 24689999999999999999999999999999999999864
No 5
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=7.7e-41 Score=270.54 Aligned_cols=228 Identities=29% Similarity=0.422 Sum_probs=206.5
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
.++..+++++.+..|++|.+|.....+.+|..|+++|++ +.|++...++.|+++++|+++++|+++..|++..+....+
T Consensus 269 r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~ 348 (596)
T KOG1177|consen 269 RAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVD 348 (596)
T ss_pred HhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCc
Confidence 344455679999999999999889999999999999996 5689999999999999999999999999999999999999
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccc-cCCCCCCCCCcccccCCCcEEEEEeCCCCccC
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATME-NSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~-~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v 164 (235)
++++|.++.||+++|+++++.+.....-..+...||+||++++.+.. ..+..+....++|+.+++.+..++| +.|..+
T Consensus 349 ~s~lr~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v 427 (596)
T KOG1177|consen 349 LSSLRKGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEV 427 (596)
T ss_pred hhhhhhheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCcc
Confidence 99999999999999999999998865423477899999999877653 3333345567899999999999999 699999
Q ss_pred CCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+-|..|||+++|.+++.+||++++.+.++...+.||+|||.+++|++|.++++||.||+|+.+|++|+|.|
T Consensus 428 ~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~E 498 (596)
T KOG1177|consen 428 PLGTKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTE 498 (596)
T ss_pred ccCCCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999975
No 6
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.8e-39 Score=281.40 Aligned_cols=224 Identities=44% Similarity=0.795 Sum_probs=200.5
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc-CCCCCCCce
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-KKFDLSSLK 90 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-~~~~l~~lr 90 (235)
.++++++.+|++|.+|+...++.++..|+++++.+++++..+++.++++++|++.++|+++..+.+.... ....++++|
T Consensus 243 ~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr 322 (560)
T PLN02574 243 SDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLK 322 (560)
T ss_pred CCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccce
Confidence 5689999999999999987788888999999999999999999999999999999999999999887543 344678999
Q ss_pred EEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCce
Q 026632 91 LVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLG 170 (235)
Q Consensus 91 ~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~G 170 (235)
.++.+|+++++++++++.+.++++.+++.||+||++.+...............+|.|.++++++++|++++++++.|+.|
T Consensus 323 ~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~G 402 (560)
T PLN02574 323 QVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCG 402 (560)
T ss_pred EEEEecccCCHHHHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCe
Confidence 99999999999999999999977999999999999876543222211234568999999999999998899999999999
Q ss_pred EEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 171 EIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 171 el~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
||+++++.++.||+++++.+.+.+..+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 403 ei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~e 467 (560)
T PLN02574 403 ELWIQGPGVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPAD 467 (560)
T ss_pred EEEEECcchhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHH
Confidence 99999999999999999999888878999999999999999999999999999999999999864
No 7
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=5.2e-39 Score=270.90 Aligned_cols=214 Identities=40% Similarity=0.630 Sum_probs=187.9
Q ss_pred cEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCC---HHHHHHHHHhccceEEeecHHHHHHHHhcCCcC----CCCC
Q 026632 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD---LEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK----KFDL 86 (235)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~---~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~----~~~l 86 (235)
|++++++|++|.+|+...++.++..|+++++.+... ++.+++.++++++|+++++|+++..+++..+.. ...+
T Consensus 197 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l 276 (417)
T PF00501_consen 197 DRILSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDL 276 (417)
T ss_dssp TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTG
T ss_pred ceEEeeccccccccccccccccccccccccccccccccccccchhccccccccccccccccccccccccccccccccccc
Confidence 599999999999999889999999999999998654 477899999999999999999999999843222 3478
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++++|+++++++.+.+++.++..++++.||+||++.++..........+.+++|.|+++++++++|+++++++++
T Consensus 277 ~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~ 356 (417)
T PF00501_consen 277 SSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPP 356 (417)
T ss_dssp TT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBEST
T ss_pred ccccccccccccCChhhccccccccccccceecccccccceeeecccccccccccccccccccccccccccccccccccc
Confidence 88999999999999999999999998558999999999999887553222234567899999999999999888999999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEec
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYK 227 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~ 227 (235)
|+.|||++++|.++.||+++++.+.+.|..+|||+|||+|++|++|++++.||.||+||++
T Consensus 357 g~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 357 GEPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TSEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred cccccccccCCccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 9999999999999999999999999988666899999999999999999999999999974
No 8
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-38 Score=282.26 Aligned_cols=220 Identities=24% Similarity=0.360 Sum_probs=189.0
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhc--------CCcC
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKH--------GLVK 82 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~--------~~~~ 82 (235)
.++|++++++|++|.+++. ..+.+++.|+++++.+. ++..+++.|+++++|+++++|.++..|.+. ...+
T Consensus 345 ~~~d~~ls~LPL~Hi~~~~-~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~ 422 (746)
T PTZ00342 345 YNPKTHLSYLPISHIYERV-IAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLK 422 (746)
T ss_pred CCCCeEEEeCcHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHH
Confidence 3568999999999999994 56778999999998865 899999999999999999999999888642 1000
Q ss_pred ----------------------------------CCCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccc
Q 026632 83 ----------------------------------KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGI 128 (235)
Q Consensus 83 ----------------------------------~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~ 128 (235)
....+++|.+++||+++++++.+++++.++ +.+++.||+||+++.
T Consensus 423 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~gYGlTEt~~~ 501 (746)
T PTZ00342 423 RFLVKKILSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQGYGLTETTGP 501 (746)
T ss_pred HHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEEeeccCcccce
Confidence 001268999999999999999999998886 999999999999876
Q ss_pred cccccCCCCCCCCCcccccC-CCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEE
Q 026632 129 ATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGY 207 (235)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~p~-~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~ 207 (235)
++..... +...+++|.|+ |+++++++|.++....+..+.|||+++||.++.|||++|+.|++.|+.+|||+|||+|+
T Consensus 502 ~~~~~~~--~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~ 579 (746)
T PTZ00342 502 IFVQHAD--DNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQ 579 (746)
T ss_pred eeeccCC--CCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEE
Confidence 6654433 45668899998 99999999865555555567899999999999999999999999998899999999999
Q ss_pred EcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 208 FDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 208 ~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
+|++|+++++||+||+|++ +|++|+|++
T Consensus 580 ~d~dG~l~i~gR~kdlIkls~Ge~I~p~e 608 (746)
T PTZ00342 580 INKNGSLTFLDRSKGLVKLSQGEYIETDM 608 (746)
T ss_pred ECCCCeEEEEccCCCeEEeCCCEEEchHH
Confidence 9999999999999999996 799999964
No 9
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.6e-37 Score=269.92 Aligned_cols=228 Identities=46% Similarity=0.775 Sum_probs=204.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+........++
T Consensus 219 ~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~ 298 (537)
T PLN02246 219 LYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLS 298 (537)
T ss_pred cCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCcc
Confidence 44567799999999999999977788999999999999999999999999999999999999999999887666566788
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccC---CCCCCCCCcccccCCCcEEEEEeCCCCccC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENS---FAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~---~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v 164 (235)
++|.++.||+++++++.+.+.+.|++..+++.||+||++.++..... .......+.+|+|+++++++++|+++++++
T Consensus 299 ~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~ 378 (537)
T PLN02246 299 SIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASL 378 (537)
T ss_pred ceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcC
Confidence 99999999999999999999999987889999999999876543211 111234467899999999999998789999
Q ss_pred CCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|+.|||+++++.++.||+++++.+...+..++||+|||+++++++|++++.||.||+|+++|++|+|.+
T Consensus 379 ~~g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~e 449 (537)
T PLN02246 379 PRNQPGEICIRGPQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAE 449 (537)
T ss_pred CCCCceEEEEECCchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHH
Confidence 99999999999999999999999999888878899999999999999999999999999999999999863
No 10
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.7e-38 Score=280.49 Aligned_cols=221 Identities=29% Similarity=0.475 Sum_probs=184.0
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--------
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-------- 81 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-------- 81 (235)
..++|++++++|++|.++.. ....++..|+++++.+ +++..+++.++++++|+++++|+++..+.+....
T Consensus 266 ~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~ 343 (666)
T PLN02614 266 LTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFL 343 (666)
T ss_pred CCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHH
Confidence 45679999999999999984 5567788999998875 5899999999999999999999999877642100
Q ss_pred -------------------------CC-----------CCC-CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccc
Q 026632 82 -------------------------KK-----------FDL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTE 124 (235)
Q Consensus 82 -------------------------~~-----------~~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 124 (235)
.. ..+ +++|.+++||+++++++ +.+.+.++++++++.||+||
T Consensus 344 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE 422 (666)
T PLN02614 344 KKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTE 422 (666)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHh
Confidence 00 001 58999999999999876 56667776689999999999
Q ss_pred cccccccccCCCCCCCCCcccccCCCcEEEEEeC-C-CCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEec
Q 026632 125 TSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-D-TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHT 202 (235)
Q Consensus 125 ~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~-~-~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~T 202 (235)
++++.+...... ....+++|+|+|+++++++|. + .++++++|+.|||+++||.++.|||++|+.|++.| .+|||+|
T Consensus 423 ~~~~~~~~~~~~-~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f-~dGw~~T 500 (666)
T PLN02614 423 SCAGTFVSLPDE-LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVL-IDGWLHT 500 (666)
T ss_pred hhhheeeecccc-CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhh-ccCCccc
Confidence 986554333221 234578999999999999983 2 34789999999999999999999999999999998 6899999
Q ss_pred CceEEEcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 203 GDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 203 gDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
||+|++|++|+++|+||+||+||+ +|++|+|+|
T Consensus 501 GDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~e 534 (666)
T PLN02614 501 GDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVEN 534 (666)
T ss_pred ceEEEEcCCCCEEEEEcchhceecCCCeeecHHH
Confidence 999999999999999999999996 799999974
No 11
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=5.7e-38 Score=278.61 Aligned_cols=228 Identities=21% Similarity=0.280 Sum_probs=198.1
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc-
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV- 81 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~- 81 (235)
.+...++|++++..|++|++|+...++.+|+.|+++++.++ +++..+++.|+++++|++.++|++++.|.+....
T Consensus 311 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 390 (666)
T PLN02654 311 AFDYKPTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEY 390 (666)
T ss_pred hcCCCCCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccc
Confidence 34566779999999999999988888999999999999863 4899999999999999999999999999886532
Q ss_pred -CCCCCCCceEEEecccCCcHHHHHHHHHhCCC--CceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeC
Q 026632 82 -KKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 82 -~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~--~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~ 158 (235)
...+++++|.++++|+++++++++++.+.++. +.+.+.||+||+++..............+++|.|+++++++++|+
T Consensus 391 ~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~ 470 (666)
T PLN02654 391 VTRHSRKSLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDE 470 (666)
T ss_pred cccCChhheeEEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECC
Confidence 33467899999999999999999999999974 679999999999876554322212345678999999999999995
Q ss_pred CCCccCCCCCceEEEEEc--CcccccccCCccccccccc--CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 159 DTQKPLPPNQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 159 ~~~~~v~~g~~Gel~v~~--~~~~~~y~~~~~~~~~~~~--~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+|++++.++.|||++++ |+++.+|+++++.+...+. .+|||+|||++++|++|.+++.||+||+||++|++|+|+
T Consensus 471 -~g~~~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~ 549 (666)
T PLN02654 471 -KGKEIEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTA 549 (666)
T ss_pred -CCCCCCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHH
Confidence 78899999999999998 7899999999988876652 379999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 550 E 550 (666)
T PLN02654 550 E 550 (666)
T ss_pred H
Confidence 4
No 12
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=2.4e-38 Score=271.52 Aligned_cols=209 Identities=33% Similarity=0.494 Sum_probs=180.0
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--------c
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--------V 81 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~--------~ 81 (235)
..++|+.++++|+.|.+...+.....+..|.+....+ ++..+++.+.+++||.++++|.+|+.+-+... .
T Consensus 230 ~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~~~--~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~ 307 (613)
T COG1022 230 IGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLFKE--DPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAV 307 (613)
T ss_pred CCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEecC--CHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchh
Confidence 5578999999999999999655555555555555544 99999999999999999999998874432110 0
Q ss_pred ----------------------------------------CCCCCCCceEEEecccCCcHHHHHHHHHhCCCCceecccc
Q 026632 82 ----------------------------------------KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYG 121 (235)
Q Consensus 82 ----------------------------------------~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG 121 (235)
....-.++|.+++||+++++++.++++.. ++++...||
T Consensus 308 ~~~if~~a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYG 385 (613)
T COG1022 308 RRKLFRWALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYG 385 (613)
T ss_pred HHHHHHHHHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEec
Confidence 00011489999999999999999999876 599999999
Q ss_pred ccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEe
Q 026632 122 LTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVH 201 (235)
Q Consensus 122 ~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~ 201 (235)
+||+++.++..++. ....+++|.|+|++++++.|. |||+|+||.++.|||++|+.|++.|+.|||++
T Consensus 386 lTEts~~~~v~~~~--~~~~gtvG~p~p~~evKI~d~-----------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~ 452 (613)
T COG1022 386 LTETSAVVSVNPPD--RFVLGTVGKPLPGIEVKIADD-----------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFR 452 (613)
T ss_pred ccccccceEEcccc--CcccCCcCCcCCCceEEEccC-----------ceEEEecchhcchhcCChHHHhhhccccCCcc
Confidence 99999999987766 677789999999999999995 99999999999999999999999999999999
Q ss_pred cCceEEEcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 202 TGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 202 TgDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
|||+|.++++|+++++||+||+|++ +|++|.|++
T Consensus 453 TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~ 487 (613)
T COG1022 453 TGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEP 487 (613)
T ss_pred cCceeEEcCCCcEEEeecccceEECCCCcccChHH
Confidence 9999999999999999999999999 899999973
No 13
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=1.7e-37 Score=271.14 Aligned_cols=221 Identities=29% Similarity=0.474 Sum_probs=191.5
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFD 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~ 85 (235)
+...++|+++.++|++|..|+ ..++.++..|+++++.+++++..+++.++++++|++.++|+++..|++.... ....
T Consensus 208 ~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 286 (563)
T PLN02860 208 VGYGEDDVYLHTAPLCHIGGL-SSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKV 286 (563)
T ss_pred cCCCCCCEEEEecCchhhccH-HHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhcccc
Confidence 445667999999999999998 5788999999999999999999999999999999999999999999876432 2245
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---------------------CCCCCcc
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---------------------SRNIGSA 144 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---------------------~~~~~~~ 144 (235)
++++|.++.||+++++++.+.+++.|++.++++.||+||+++.+........ ......+
T Consensus 287 ~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 366 (563)
T PLN02860 287 FPSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCV 366 (563)
T ss_pred ccceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCccc
Confidence 7899999999999999999999999987999999999999865443211100 0112257
Q ss_pred cccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCce
Q 026632 145 GALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELI 224 (235)
Q Consensus 145 g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i 224 (235)
|+|++++++++++++ +|+.|||++++|.++.||+++++.+...+..+|||+|||+|+++++|++++.||+||+|
T Consensus 367 G~p~~~~~v~i~~~~------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i 440 (563)
T PLN02860 367 GKPAPHVELKIGLDE------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRI 440 (563)
T ss_pred CCccCCcEEEEecCC------CCceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeeccccee
Confidence 999999999999864 68899999999999999999999999888789999999999999999999999999999
Q ss_pred EeccEEeecCC
Q 026632 225 KYKGFQVTSNW 235 (235)
Q Consensus 225 ~~~G~~v~p~~ 235 (235)
|++|++|+|.|
T Consensus 441 ~~~G~~v~p~e 451 (563)
T PLN02860 441 KTGGENVYPEE 451 (563)
T ss_pred EECCEEccHHH
Confidence 99999999864
No 14
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-37 Score=267.12 Aligned_cols=226 Identities=32% Similarity=0.534 Sum_probs=201.3
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+....+|++++++|++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++........+
T Consensus 225 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~ 304 (546)
T PRK08314 225 WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDL 304 (546)
T ss_pred hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCc
Confidence 34456779999999999999998888999999999999999999999999999999999999999999887765556678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.||+++++++.+++.+.|+ .++++.||+||++......... ......+|.|+++++++++|++++++++.
T Consensus 305 ~~l~~~~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~~~~~~ 381 (546)
T PRK08314 305 SSLRYIGGGGAAMPEAVAERLKELTG-LDYVEGYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETLEELPP 381 (546)
T ss_pred hhhheeeeccccCCHHHHHHHHHHcC-CcEEecccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCCcCCCC
Confidence 89999999999999999999999996 8999999999998765543322 23456789999999999999888999999
Q ss_pred CCceEEEEEcCcccccccCCccccccccc---CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTID---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~---~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||+++++.++.||+++++.+++.|. ..+||+|||+++++++|++++.||+||+|+++|++|+|+|
T Consensus 382 g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~e 453 (546)
T PRK08314 382 GEVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAE 453 (546)
T ss_pred CCceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHH
Confidence 99999999999999999999988887763 2459999999999999999999999999999999999864
No 15
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=8e-37 Score=266.12 Aligned_cols=223 Identities=25% Similarity=0.356 Sum_probs=198.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
...++|++++.+|++|..|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+........+++
T Consensus 234 ~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~ 313 (547)
T PRK13295 234 GLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSS 313 (547)
T ss_pred CCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCccc
Confidence 34567999999999999998888999999999999999889999999999999999999999999999877666667889
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++.+|+++++++.+++.+.++ +++++.||+||++.++..............+|+|.++++++++|+ ++++++.|+
T Consensus 314 l~~~~~~G~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~-~~~~~~~g~ 391 (547)
T PRK13295 314 LRTFLCAGAPIPGALVERARAALG-AKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDA-DGAPLPAGQ 391 (547)
T ss_pred ceEEEEecCCCCHHHHHHHHHHhC-CCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECC-CCCCCCCCC
Confidence 999999999999999999999985 999999999999876654432211233457899999999999995 789999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++++.++.||+++++.+... .+|||+|||+++++++|++++.||.||+|+++|++|+|.+
T Consensus 392 ~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~ 456 (547)
T PRK13295 392 IGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVE 456 (547)
T ss_pred CCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHH
Confidence 9999999999999999999888765 6789999999999999999999999999999999999863
No 16
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.6e-37 Score=275.41 Aligned_cols=223 Identities=29% Similarity=0.429 Sum_probs=187.2
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc------
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV------ 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~------ 81 (235)
+...++|++++++|++|.+++. .++.++..|+++++.+. ++..+++.++++++|+++++|+++..+.+....
T Consensus 257 ~~~~~~d~~l~~lPl~h~~~~~-~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~ 334 (651)
T PLN02736 257 TKFYPSDVHISYLPLAHIYERV-NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESG 334 (651)
T ss_pred cCCCCCCEEEEeCCHHHHHHHH-HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhccc
Confidence 3456779999999999999994 67888999999998765 889999999999999999999998877543100
Q ss_pred ----------------------CCC-------------CC-CCceEEEecccCCcHHHHHHHHHhCCCCceecccccccc
Q 026632 82 ----------------------KKF-------------DL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTET 125 (235)
Q Consensus 82 ----------------------~~~-------------~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 125 (235)
... .+ +++|.+++||+++++++.+++++.++ +++++.||+||+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~~YG~TE~ 413 (651)
T PLN02736 335 GLKERLFNAAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLEGYGMTET 413 (651)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEEEechHHh
Confidence 000 01 47999999999999999999998886 899999999999
Q ss_pred ccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCcc---CCCCCceEEEEEcCcccccccCCcccccccccCCCeEec
Q 026632 126 SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP---LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHT 202 (235)
Q Consensus 126 g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~---v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~T 202 (235)
++.+...... ....+++|+|+|+++++++|.++++. ..+++.|||+++||.++.||+++|+.+.+.|+.+|||+|
T Consensus 414 ~~~~~~~~~~--~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~T 491 (651)
T PLN02736 414 SCVISGMDEG--DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHT 491 (651)
T ss_pred chheeccCCC--CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeec
Confidence 8766544332 34567899999999999998544322 233457999999999999999999999999988999999
Q ss_pred CceEEEcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 203 GDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 203 gDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
||+|++|++|+++|.||+||+||+ +|++|+|+|
T Consensus 492 GDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~e 525 (651)
T PLN02736 492 GDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEK 525 (651)
T ss_pred cceEEEcCCCcEEEEEechhheEcCCCcEechHH
Confidence 999999999999999999999997 799999974
No 17
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.4e-37 Score=266.83 Aligned_cols=220 Identities=27% Similarity=0.381 Sum_probs=192.3
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFD 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~ 85 (235)
+...++|+++++.|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.... ....
T Consensus 243 ~~~~~~d~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 321 (549)
T PRK07788 243 VPFRAGETTLLPAPMFHATGW-AHLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYD 321 (549)
T ss_pred CCCCcCCeEEEccchHHHHHH-HHHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCC
Confidence 334567999999999999999 5677889999999999889999999999999999999999999999887654 4456
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
++++|.+++||+++++++.+++.+.|+ ..+++.||+||++.++..... ......+.+|+|+++++++++|+ ++++++
T Consensus 322 ~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~l~~~YG~TE~~~~~~~~~~-~~~~~~~~vG~~~~~~~~~i~d~-~~~~~~ 398 (549)
T PRK07788 322 TSSLKIIFVSGSALSPELATRALEAFG-PVLYNLYGSTEVAFATIATPE-DLAEAPGTVGRPPKGVTVKILDE-NGNEVP 398 (549)
T ss_pred CCceeEEEEeCCCCCHHHHHHHHHHhC-ccceeccCcchhchhhccChh-hhhhcCCCcccCCCCcEEEEECC-CcCCCC
Confidence 789999999999999999999999997 789999999999865543322 11234567999999999999995 789999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++++.++.||++++.. .. .+|||+|||+++++++|++++.||+||+||++|++|+|.+
T Consensus 399 ~g~~Gel~v~g~~~~~gY~~~~~~---~~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~e 464 (549)
T PRK07788 399 RGVVGRIFVGNGFPFEGYTDGRDK---QI-IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAE 464 (549)
T ss_pred CCCeEEEEEeCCCccccccCCCcc---cc-cCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHH
Confidence 999999999999999999988765 12 5799999999999999999999999999999999999864
No 18
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.9e-37 Score=263.32 Aligned_cols=223 Identities=33% Similarity=0.485 Sum_probs=199.4
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
....+|++++.+|++|.+|+...++.++..|+++++.+.++++.+++.++++++|++.++|++++.+++........+++
T Consensus 186 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 265 (496)
T PRK06839 186 DLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQS 265 (496)
T ss_pred CCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcc
Confidence 45567999999999999999877789999999999998899999999999999999999999999999887666667889
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++.||+++++++.+.+.+. ++++.+.||+||++.++............+.+|+|+++++++++|+ +++.++.|+
T Consensus 266 lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~ 342 (496)
T PRK06839 266 VRWFYNGGAPCPEELMREFIDR--GFLFGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDE-NKNKVEVGE 342 (496)
T ss_pred cceEEECCCCCCHHHHHHHHHh--CCeeEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECC-CcCCCCCCC
Confidence 9999999999999999999886 5899999999999976554333322345678999999999999996 667799999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++++.++.+|+++++.+...+ .+|||+|||+++++++|++++.||.||+|+.+|++|+|.+
T Consensus 343 ~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 408 (496)
T PRK06839 343 VGELLIRGPNVMKEYWNRPDATEETI-QDGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLE 408 (496)
T ss_pred ceEEEEECCCcchhhcCChHHHHHHH-cCCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHH
Confidence 99999999999999999999888777 6899999999999999999999999999999999999864
No 19
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=8.5e-37 Score=269.79 Aligned_cols=227 Identities=28% Similarity=0.382 Sum_probs=196.6
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-- 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-- 81 (235)
+...++|++++..|++|+.++...++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+....
T Consensus 273 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 352 (625)
T TIGR02188 273 FDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWV 352 (625)
T ss_pred cCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCccc
Confidence 4456679999999999999987788999999999999753 4899999999999999999999999999886543
Q ss_pred CCCCCCCceEEEecccCCcHHHHHHHHHhCCC--CceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCC
Q 026632 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD 159 (235)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~--~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~ 159 (235)
....++++|.++++|+++++++++++.+.++. +.+++.||+||+++++..........+.+.+|+|+++++++++| +
T Consensus 353 ~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~ 431 (625)
T TIGR02188 353 KKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-E 431 (625)
T ss_pred ccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-C
Confidence 23457899999999999999999999998863 78999999999997655432222234567899999999999999 5
Q ss_pred CCccCC-CCCceEEEEEc--CcccccccCCccccccccc--CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 160 TQKPLP-PNQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 160 ~~~~v~-~g~~Gel~v~~--~~~~~~y~~~~~~~~~~~~--~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+|++++ .|+.|||++++ |+++.+|+++++.+...+. .+|||+|||++++|++|++++.||+||+||++|++|+|+
T Consensus 432 ~g~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~ 511 (625)
T TIGR02188 432 EGNPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTA 511 (625)
T ss_pred CCCCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHH
Confidence 889999 99999999999 6899999999987776653 478999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 512 e 512 (625)
T TIGR02188 512 E 512 (625)
T ss_pred H
Confidence 4
No 20
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.6e-37 Score=286.44 Aligned_cols=226 Identities=32% Similarity=0.470 Sum_probs=200.9
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++.+|++|.+|+...++.++..|+++++.+ .++++.+++.++++++|++.++|++++.+.+........+
T Consensus 818 ~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 897 (1146)
T PRK08633 818 FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMF 897 (1146)
T ss_pred cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccC
Confidence 345677999999999999999777899999999999876 4789999999999999999999999999988766666678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC--------CCCCCCcccccCCCcEEEEEeC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA--------GSRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~--------~~~~~~~~g~p~~~~~~~~~d~ 158 (235)
+++|.++.||+++++++.+.+++.++ .++++.||+||+++++....... ...+.+++|+|.|+++++++|+
T Consensus 898 ~~lr~~~~gg~~~~~~~~~~~~~~~g-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~ 976 (1146)
T PRK08633 898 ASLRLVVAGAEKLKPEVADAFEEKFG-IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDP 976 (1146)
T ss_pred CCeeeEEEcCCcCCHHHHHHHHHHhC-CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcC
Confidence 89999999999999999999999996 99999999999988765432211 0124568999999999999998
Q ss_pred CCCccCCCCCceEEEEEcCcccccccCCcccccccccCC----CeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 159 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK----GWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 159 ~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~----g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+++++++.|+.|||+++|+.++.||+++++.+++.+ .+ +||+|||++++|++|++++.||.||+||++|++|+|+
T Consensus 977 ~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~-~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~ 1055 (1146)
T PRK08633 977 ETFEELPPGEDGLILIGGPQVMKGYLGDPEKTAEVI-KDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLG 1055 (1146)
T ss_pred CCCccCCCCCceEEEEcCCCccccccCCccchHHHh-hcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHH
Confidence 889999999999999999999999999999988877 34 8999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 1056 e 1056 (1146)
T PRK08633 1056 A 1056 (1146)
T ss_pred H
Confidence 4
No 21
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-37 Score=271.36 Aligned_cols=222 Identities=25% Similarity=0.336 Sum_probs=191.2
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC--CC----HHHHHHHHHhccceEEeecHHHHHHHHhcCCc--
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FD----LEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-- 81 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~--~~----~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-- 81 (235)
...+|++++..|++|+.++ ..++.++..|+++++.+. +. +..+++.++++++|++.++|++++.|.+....
T Consensus 293 ~~~~d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 371 (647)
T PTZ00237 293 KDIPTVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEAT 371 (647)
T ss_pred CCCCcEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccc
Confidence 3456999999999999876 578899999999999764 12 68899999999999999999999999875321
Q ss_pred ---CCCCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeC
Q 026632 82 ---KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 82 ---~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~ 158 (235)
...+++++|.++++|+++++++.+++.+.++ +.+++.||+||++++....... .....+++|+|+++++++++|+
T Consensus 372 ~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g-~~i~~~yG~TE~~~~~~~~~~~-~~~~~~s~G~p~~g~~~~i~d~ 449 (647)
T PTZ00237 372 IIRSKYDLSNLKEIWCGGEVIEESIPEYIENKLK-IKSSRGYGQTEIGITYLYCYGH-INIPYNATGVPSIFIKPSILSE 449 (647)
T ss_pred ccccccCcchheEEEecCccCCHHHHHHHHHhcC-CCEEeeechHHhChhhhccCCC-CCCCCCCCccCcCCceEEEECC
Confidence 2346789999999999999999999999987 9999999999999765533221 1233478999999999999995
Q ss_pred CCCccCCCCCceEEEEEcC---cccccccCCcccccccccC-CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 159 DTQKPLPPNQLGEIWLRGP---NMMRGYYNNEQATKLTIDK-KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 159 ~~~~~v~~g~~Gel~v~~~---~~~~~y~~~~~~~~~~~~~-~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+|++++.|+.|||++++| +++.+||++++.+.+.|.. +|||+|||++++|++|++++.||+||+||++|++|+|+
T Consensus 450 -~g~~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~ 528 (647)
T PTZ00237 450 -DGKELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLN 528 (647)
T ss_pred -CCCCCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHH
Confidence 899999999999999986 7899999999988877743 79999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 529 e 529 (647)
T PTZ00237 529 T 529 (647)
T ss_pred H
Confidence 4
No 22
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-36 Score=261.59 Aligned_cols=225 Identities=31% Similarity=0.483 Sum_probs=200.8
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
....+|+++...|++|.+++....+.+++.|+++++.+.+++..+++.++++++|++.++|+++..+++........+++
T Consensus 186 ~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~ 265 (497)
T PRK06145 186 GLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDS 265 (497)
T ss_pred CCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCcccccccc
Confidence 45667999999999999999777788899999999999899999999999999999999999999998876666667789
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++.||+++++++.+++.+.|++.++++.||+||++...............+.+|+|+++++++++|+ +++.++.|+
T Consensus 266 l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~~~ 344 (497)
T PRK06145 266 LAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADG-AGRWLPPNM 344 (497)
T ss_pred ceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECC-CCCCCCCCC
Confidence 9999999999999999999999987899999999999986554332211234567899999999999995 788999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++|+.++.||+++++.+.+.| .++||+|||+++++++|++++.||+||+|+++|++|+|++
T Consensus 345 ~Gel~v~g~~~~~Gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ 410 (497)
T PRK06145 345 KGEICMRGPKVTKGYWKDPEKTAEAF-YGDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSE 410 (497)
T ss_pred ceEEEEECcchhhhhcCChHHHHHHH-hCCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHH
Confidence 99999999999999999999998887 6899999999999999999999999999999999999863
No 23
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-36 Score=262.29 Aligned_cols=228 Identities=36% Similarity=0.579 Sum_probs=203.7
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+...++|++++.+|++|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+........+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~ 280 (513)
T PRK07656 201 YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDL 280 (513)
T ss_pred hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCc
Confidence 34456679999999999999998889999999999999888899999999999999999999999999999877777778
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC-CCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~-~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
+++|.++.||+++++++.+.+.+.++...+++.||+||+++++..+..... ......+|.|+++++++++|+ ++++++
T Consensus 281 ~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~-~~~~~~ 359 (513)
T PRK07656 281 SSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNE-LGEEVP 359 (513)
T ss_pred cceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECC-CCCCCC
Confidence 999999999999999999999999973389999999999887765543221 122568999999999999995 789999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++++.++.+|++++..+...+..++||+|||+++++++|.+++.||.||+|+++|.+++|.+
T Consensus 360 ~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~ 429 (513)
T PRK07656 360 VGEVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAE 429 (513)
T ss_pred CCCceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHH
Confidence 9999999999999999999999888888866899999999999999999999999999999999999853
No 24
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.3e-36 Score=268.71 Aligned_cols=227 Identities=21% Similarity=0.248 Sum_probs=193.7
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--c
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--V 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~--~ 81 (235)
+...++|++++..|++|..|+...++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+... .
T Consensus 269 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 348 (628)
T TIGR02316 269 FGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWL 348 (628)
T ss_pred cCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCccc
Confidence 4456679999999999999987788999999999999863 478999999999999999999999998887643 2
Q ss_pred CCCCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCC--CCCCCCCcccccCCCcEEEEEeCC
Q 026632 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF--AGSRNIGSAGALAPGVEALIVSVD 159 (235)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~--~~~~~~~~~g~p~~~~~~~~~d~~ 159 (235)
...+++++|.++++|+++++++.+++.+.++ ..+++.||+||++......... ......+++|+|+++++++++|++
T Consensus 349 ~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~~-~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~ 427 (628)
T TIGR02316 349 RKHDLSSLHWLFLAGEPLDEPTAHWITDGLG-KPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEA 427 (628)
T ss_pred ccCCccceeEEEEecCCCCHHHHHHHHHHhC-CCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECC
Confidence 3446889999999999999999999999886 8899999999998543322211 112345778999999999999977
Q ss_pred CCccCCCCCceEEEEEcC---cccccccCCcccccccc---cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeec
Q 026632 160 TQKPLPPNQLGEIWLRGP---NMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 160 ~~~~v~~g~~Gel~v~~~---~~~~~y~~~~~~~~~~~---~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
+|++++.|+.|||++++| ..+.+|+++++.+.+.+ ..++||+|||+|++|++|++++.||+||+||++|++|+|
T Consensus 428 ~g~~~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~ 507 (628)
T TIGR02316 428 TGRPCGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGT 507 (628)
T ss_pred CCCCCCCCCcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCH
Confidence 899999999999999998 46789999888766544 257799999999999999999999999999999999998
Q ss_pred CC
Q 026632 234 NW 235 (235)
Q Consensus 234 ~~ 235 (235)
+|
T Consensus 508 ~e 509 (628)
T TIGR02316 508 RE 509 (628)
T ss_pred HH
Confidence 64
No 25
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=3.9e-37 Score=273.02 Aligned_cols=220 Identities=27% Similarity=0.430 Sum_probs=180.3
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcC-----------
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG----------- 79 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~----------- 79 (235)
.++|++++++|++|.++... .+.++..|+++++.+ +++..+++.|+++++|+++++|+++..+.+..
T Consensus 264 ~~~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~ 341 (660)
T PLN02861 264 TEEDSYFSYLPLAHVYDQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLR 341 (660)
T ss_pred CCCCEEEEECcHHHHHHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHH
Confidence 46799999999999999854 556899999998874 58999999999999999999999998876410
Q ss_pred --------------------------CcCCC-------CC-CCceEEEecccCCcHHHHHHHHHhCCCCceecccccccc
Q 026632 80 --------------------------LVKKF-------DL-SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTET 125 (235)
Q Consensus 80 --------------------------~~~~~-------~l-~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~ 125 (235)
..... .+ .++|.+++||+++++++.+ |.+.++...+++.||+||+
T Consensus 342 ~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~ 420 (660)
T PLN02861 342 KKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTES 420 (660)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhh
Confidence 00000 01 4789999999999999855 6666664579999999999
Q ss_pred ccccccccCCCCCCCCCcccccCCCcEEEEEeC-CCC-ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecC
Q 026632 126 SGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQ-KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTG 203 (235)
Q Consensus 126 g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~-~~~-~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~Tg 203 (235)
++.++...... ....+++|+|+++++++++|. +.| ..+++++.|||+++||.++.||+++|+.+.+.| .+|||+||
T Consensus 421 ~~~~~~~~~~~-~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f-~dGw~~TG 498 (660)
T PLN02861 421 CGGCFTSIANV-FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVL-IDGWFHTG 498 (660)
T ss_pred hhceeeccccc-CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhh-hccCcccC
Confidence 87555332221 234578999999999999983 334 445567789999999999999999999999999 68999999
Q ss_pred ceEEEcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 204 DLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 204 Dl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
|+|++|++|+++|.||+||+||+ +|++|+|+|
T Consensus 499 Dlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~e 531 (660)
T PLN02861 499 DIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVEN 531 (660)
T ss_pred ceEEECCCCcEEEEeccccceEcCCCeEEcHHH
Confidence 99999999999999999999997 799999974
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-36 Score=267.43 Aligned_cols=227 Identities=30% Similarity=0.402 Sum_probs=195.8
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-- 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-- 81 (235)
+...++|++++..|++|..++...++.+|..|+++++.+. +++..+++.++++++|++.++|++++.|.+....
T Consensus 282 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 361 (637)
T PRK00174 282 FDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHP 361 (637)
T ss_pred cCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCccc
Confidence 3455679999999999999987789999999999999753 4799999999999999999999999999886543
Q ss_pred CCCCCCCceEEEecccCCcHHHHHHHHHhCCC--CceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCC
Q 026632 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPS--ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD 159 (235)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~--~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~ 159 (235)
....++++|.++.+|+++++++.+++.+.++. +.+++.||+||++.+...........+.+.+|+|+++++++++|+
T Consensus 362 ~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~- 440 (637)
T PRK00174 362 KKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDE- 440 (637)
T ss_pred ccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECC-
Confidence 23457899999999999999999999998863 789999999999976554322212334568999999999999994
Q ss_pred CCccCCCCCceEEEEEc--CcccccccCCccccccccc--CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 160 TQKPLPPNQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 160 ~~~~v~~g~~Gel~v~~--~~~~~~y~~~~~~~~~~~~--~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++++.|+.|||++++ |+++.||+++++.+.+.+. .+|||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 441 ~g~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~e 520 (637)
T PRK00174 441 EGNPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAE 520 (637)
T ss_pred CCCCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHH
Confidence 78999999999999999 6899999999988776652 4789999999999999999999999999999999999864
No 27
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.6e-36 Score=265.93 Aligned_cols=224 Identities=29% Similarity=0.503 Sum_probs=191.4
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCC---C---HHHHHHHHHhccceEEeecHHHHHHHHhcCCc
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF---D---LEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~---~---~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~ 81 (235)
+...++|++++.+|++|..++...++.++..|+++++.++. + ...+++.++++++|++.++|+++..+.+....
T Consensus 249 ~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~ 328 (632)
T PRK07529 249 LGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVD 328 (632)
T ss_pred cCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccc
Confidence 33467799999999999999988899999999999997642 2 36889999999999999999999999887533
Q ss_pred CCCCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeC-CC
Q 026632 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DT 160 (235)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~-~~ 160 (235)
..+++++|.+++||+++++++.+++.+.++ +++++.||+||+++++...+.. .....+++|.|+|+..++++.. ++
T Consensus 329 -~~~~~slr~v~~gg~~l~~~l~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~-~~~~~~svG~~~p~~~v~i~~~d~~ 405 (632)
T PRK07529 329 -GHDISSLRYALCGAAPLPVEVFRRFEAATG-VRIVEGYGLTEATCVSSVNPPD-GERRIGSVGLRLPYQRVRVVILDDA 405 (632)
T ss_pred -CCCccceEEEEEcCCCCCHHHHHHHHHHhC-CcEeeeecccccCcccccCCcc-ccccCCCcccccCCceEEEEEcCCC
Confidence 346789999999999999999999999886 9999999999998766544322 2345678999999999888632 34
Q ss_pred C---ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 161 Q---KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 161 ~---~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+ ++++.|+.|||+++||.++.||++++. +...+..++||+|||+|+++++|++++.||+||+|+++|++|+|++
T Consensus 406 g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~e 482 (632)
T PRK07529 406 GRYLRDCAVDEVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAA 482 (632)
T ss_pred CcccccCCCCCceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHH
Confidence 5 789999999999999999999998654 4555557899999999999999999999999999999999999864
No 28
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-36 Score=262.24 Aligned_cols=225 Identities=33% Similarity=0.487 Sum_probs=203.1
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
...++|++++.+|++|.+++...++.++..|+++++.+..+++.+++.++++++|++.++|+++..+.+........+++
T Consensus 208 ~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 287 (523)
T PRK08316 208 DMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSS 287 (523)
T ss_pred CCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCccc
Confidence 35567999999999999999777778899999999998889999999999999999999999999999887666667889
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++.||++++.++.+.+++.+++.++++.||+||++.++............+++|+|++++++++.|+ ++++++.|+
T Consensus 288 l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~ 366 (523)
T PRK08316 288 LRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDD-DGNDVAPGE 366 (523)
T ss_pred ceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcC-CCCCCCCCC
Confidence 9999999999999999999999977999999999999987766443322344578899999999999995 789999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++++.++.+|+++++.+++.| .++||+|||+|+++++|.+++.||+||+|+.+|++|+|++
T Consensus 367 ~Gei~v~~~~~~~~y~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~ 432 (523)
T PRK08316 367 VGEIVHRSPQLMLGYWDDPEKTAEAF-RGGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASRE 432 (523)
T ss_pred cceEEEECCchhhhhcCCHHHHHHHh-hCCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHH
Confidence 99999999999999999999888887 7899999999999999999999999999999999999863
No 29
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.5e-36 Score=261.61 Aligned_cols=223 Identities=22% Similarity=0.291 Sum_probs=195.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
....+|++++++|++|..|+...++.++..|+++++.+.+++..+++.+++++++++.++|+++..+.+........+++
T Consensus 232 ~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~ 311 (538)
T TIGR03208 232 ELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPS 311 (538)
T ss_pred CCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCc
Confidence 34567999999999999998888999999999999998899999999999999999999999999888765544556789
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++++|+++++++.+++.+.++ +.+++.||+||++.+................|+|.+++.++++|+ ++++++.|+
T Consensus 312 l~~~~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~-~~~~~~~g~ 389 (538)
T TIGR03208 312 LFTFLCAGAPIPGILVERAWELLG-ALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDA-NGAKLSQGE 389 (538)
T ss_pred ceEEEEcCCCCCHHHHHHHHHHcC-CeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECC-CCCCCcCCC
Confidence 999999999999999999999886 899999999999877654432211222346899999999999995 788999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++++.++.||+++++.+.. ..++||+|||+++++++|++++.||+||+|+.+|++|+|.+
T Consensus 390 ~Gel~v~g~~~~~gy~~~~~~~~~--~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~e 454 (538)
T TIGR03208 390 TGRLLVRGCSNFGGYLKRPHLNST--DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVE 454 (538)
T ss_pred CcEEEEecCcccccccCCcccccc--cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHH
Confidence 999999999999999999887653 47899999999999999999999999999999999999864
No 30
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.6e-36 Score=262.58 Aligned_cols=228 Identities=29% Similarity=0.476 Sum_probs=202.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEE-ccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIIL-MAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|+++..+|++|..|+...++.++..|+++++ ...+++..+++.++++++|.++++|+++..++.........+
T Consensus 235 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~ 314 (559)
T PRK08315 235 MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDL 314 (559)
T ss_pred cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCc
Confidence 4456679999999999999998889999999999995 456799999999999999999999999998888766666678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC-CCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
+++|.++.+|+++++++.+.+.+.++..++++.||+||++.+++...... .......+|+|++++.++++|++++++++
T Consensus 315 ~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~ 394 (559)
T PRK08315 315 SSLRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVP 394 (559)
T ss_pred hhhheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCC
Confidence 99999999999999999999999998667999999999998766543221 12345688999999999999987799999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++++.++.||++++..+...+..++||+|||+++++++|.+++.||.||+|+.+|++|+|++
T Consensus 395 ~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~e 464 (559)
T PRK08315 395 RGEQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPRE 464 (559)
T ss_pred CCCceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHH
Confidence 9999999999999999999999988888767899999999999999999999999999999999999863
No 31
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2.9e-36 Score=262.53 Aligned_cols=223 Identities=41% Similarity=0.752 Sum_probs=196.3
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC--Cce
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS--SLK 90 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~--~lr 90 (235)
.++.+.++|++|.+|+...++.++..|+++++.+++++..+++.++++++|++.++|+++..+.+........+. ++|
T Consensus 227 ~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~ 306 (546)
T PLN02330 227 QVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQ 306 (546)
T ss_pred ceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheee
Confidence 468999999999999977888999999999999999999999999999999999999999999886554443443 578
Q ss_pred EEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---CCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 91 LVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---SRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 91 ~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
.++.+|+++++++++++.+.|+++++++.||+||++++......... ......+|.|+++++++++|++++++++.|
T Consensus 307 ~i~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g 386 (546)
T PLN02330 307 AIMTAAAPLAPELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKN 386 (546)
T ss_pred eEEEcCCcCCHHHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCC
Confidence 99999999999999999999977999999999999865543211110 123357899999999999998889999999
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||+++++.++.||+++++.+.+.++.+|||+|||+++++++|.+++.||.+|+|+++|++|+|.+
T Consensus 387 ~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~ 454 (546)
T PLN02330 387 TPGELCVRSQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAE 454 (546)
T ss_pred CceEEEEecchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHH
Confidence 99999999999999999999999888878999999999999999999999999999999999999863
No 32
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.1e-36 Score=261.35 Aligned_cols=219 Identities=28% Similarity=0.529 Sum_probs=194.9
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceE
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 91 (235)
.+++++.+|++|.+++...++.++..|++.++.+ +.++..+++.++++++|+++++|+++..+.+........++++|.
T Consensus 251 ~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~ 330 (562)
T PRK05677 251 CEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKL 330 (562)
T ss_pred ccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceE
Confidence 4789999999999999777888888888777665 568999999999999999999999999998866555556789999
Q ss_pred EEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceE
Q 026632 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (235)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Ge 171 (235)
++.||+++++++.+.+.+.++ +++++.||+||+++++...... ..+.+++|.|+++++++++|+ ++++++.|+.||
T Consensus 331 v~~gG~~~~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d~-~~~~~~~g~~Ge 406 (562)
T PRK05677 331 TLSGGMALQLATAERWKEVTG-CAICEGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVIDD-DGNELPLGEVGE 406 (562)
T ss_pred EEEcCccCCHHHHHHHHHHcC-CCeeccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEECC-CCCCCCCCCCeE
Confidence 999999999999999999886 8999999999998776544332 334567999999999999996 689999999999
Q ss_pred EEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 172 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 172 l~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|++++|.++.||+++++.+.+.|..++||+|||+++++++|++++.||++|+|+++|++|+|+|
T Consensus 407 l~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~e 470 (562)
T PRK05677 407 LCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNE 470 (562)
T ss_pred EEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHH
Confidence 9999999999999999999999877999999999999999999999999999999999999864
No 33
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.4e-36 Score=262.64 Aligned_cols=224 Identities=29% Similarity=0.416 Sum_probs=196.9
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~ 84 (235)
+...++|++++..|++|.+|+...++.++..|+++++.+ .+++..+++.++++++|+++++|++++.+.+.... ...
T Consensus 241 ~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 320 (570)
T PRK04319 241 LDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKY 320 (570)
T ss_pred cCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccC
Confidence 345567999999999999998788999999999999875 57999999999999999999999999999876432 234
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v 164 (235)
.++++|.++++|+++++++.+++.+.++ .++++.||+||++.++...... .....+++|+|+++++++++|+ +++++
T Consensus 321 ~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d~-~~~~~ 397 (570)
T PRK04319 321 DLSSLRHILSVGEPLNPEVVRWGMKVFG-LPIHDNWWMTETGGIMIANYPA-MDIKPGSMGKPLPGIEAAIVDD-QGNEL 397 (570)
T ss_pred CcccceEEEEcccCCCHHHHHHHHHHhC-CCeEeceeecccCCEEEecCCC-CCCCCCcCcCCCCCCEEEEECC-CCCCC
Confidence 5789999999999999999999999886 8999999999999765543222 1344578999999999999995 78888
Q ss_pred CCCCceEEEEEc--CcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQLGEIWLRG--PNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~Gel~v~~--~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|+.|||++++ |.++.||+++++.+.+.+ .+|||+|||+++++++|++++.||+||+|+++|++|+|.|
T Consensus 398 ~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~~-~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~e 469 (570)
T PRK04319 398 PPNRMGNLAIKKGWPSMMRGIWNNPEKYESYF-AGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFE 469 (570)
T ss_pred CCCCceEEEEcCCCChHHhHhcCCHHHhhhhh-cCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHH
Confidence 999999999997 899999999999998888 5899999999999999999999999999999999999864
No 34
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.1e-36 Score=259.00 Aligned_cols=224 Identities=17% Similarity=0.156 Sum_probs=182.6
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--cCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VKKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~--~~~~ 84 (235)
+....+|++++.+|++|..++ ..++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|.+... ....
T Consensus 155 ~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~ 233 (499)
T PLN03051 155 MDIQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGL 233 (499)
T ss_pred cCCCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccC
Confidence 345567999999999999998 578899999999999874 788999999999999999999999999887643 3344
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCC-CCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
+++++|.+++||+++++++.+++.+.++ +..+++.||+||++......... .....+++|+|.++++++++|+ ++++
T Consensus 234 ~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~ivd~-~g~~ 311 (499)
T PLN03051 234 DWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL-QPQAPGAFSTASLGTRFVLLND-NGVP 311 (499)
T ss_pred CchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc-CCCCCccccCCCCCceEEEECC-CCCC
Confidence 6789999999999999999988877432 27899999999987543322211 1234567999999999999994 7899
Q ss_pred CCCC--CceEEEEEcCcc--cccccCCccccccccc--------CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEe
Q 026632 164 LPPN--QLGEIWLRGPNM--MRGYYNNEQATKLTID--------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 231 (235)
Q Consensus 164 v~~g--~~Gel~v~~~~~--~~~y~~~~~~~~~~~~--------~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v 231 (235)
++.| +.|||++++|.+ +.+|++++. +...+. ...||+|||+|++|++|+++++||+||+||++|++|
T Consensus 312 ~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v 390 (499)
T PLN03051 312 YPDDQPCVGEVALAPPMLGASDRLLNADH-DKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKT 390 (499)
T ss_pred CCCCCCcceEEEEecCcCCCCccccCCcc-cceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEEC
Confidence 9988 579999999976 579997653 332221 122799999999999999999999999999999999
Q ss_pred ecCC
Q 026632 232 TSNW 235 (235)
Q Consensus 232 ~p~~ 235 (235)
+|.|
T Consensus 391 ~p~E 394 (499)
T PLN03051 391 SSVE 394 (499)
T ss_pred CHHH
Confidence 9864
No 35
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=7.3e-36 Score=259.03 Aligned_cols=225 Identities=26% Similarity=0.384 Sum_probs=197.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHH-HHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+....+|++++.+|++|.+++.. .++.++..|+++++.+++++..+++.++++++|++.++|+++..+.+..+.....+
T Consensus 219 ~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~ 298 (527)
T TIGR02275 219 CWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDL 298 (527)
T ss_pred cCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCc
Confidence 34456799999999999999854 47889999999999888899999999999999999999999999988776666678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccC-CCcEEEEEeCCCCccCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQKPLP 165 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~d~~~~~~v~ 165 (235)
+++|.+++||+++++++.+++.+.++ +++++.||+||++...... .........++|+|+ ++..++++|+ ++++++
T Consensus 299 ~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~~~~~~~~v~i~d~-~g~~~~ 375 (527)
T TIGR02275 299 SSLKLLQVGGAKFSEAAARRVPAVFG-CQLQQVFGMAEGLVNYTRL-DDPAEIIFTTQGRPMSPDDEVRVVDD-HGNPVA 375 (527)
T ss_pred cceEEEEEcCCCCCHHHHHHHHHHhC-CeEEeeeccCccCccccCC-CCccccccccCCCCCCCCceEEEECC-CCCCCC
Confidence 89999999999999999999999886 8999999999976443321 111133446789999 4789999995 789999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++++.++.||+++++.+...+..++||+|||+++++++|++++.||.||+|+.+|++|+|.+
T Consensus 376 ~g~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~e 445 (527)
T TIGR02275 376 PGETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEE 445 (527)
T ss_pred CCCceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHH
Confidence 9999999999999999999999999988888999999999999999999999999999999999999864
No 36
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.3e-36 Score=261.82 Aligned_cols=221 Identities=33% Similarity=0.511 Sum_probs=199.5
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceE
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 91 (235)
.++++++.+|++|.+|+...+..++..|+++++.+.++++.+++.++++++|++.++|++++.+.+........++++|.
T Consensus 261 ~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 340 (573)
T PRK05605 261 GPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRN 340 (573)
T ss_pred CCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccE
Confidence 46899999999999999777888899999999998889999999999999999999999999999887767777899999
Q ss_pred EEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCC-CccCCCCCce
Q 026632 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT-QKPLPPNQLG 170 (235)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~-~~~v~~g~~G 170 (235)
++.||+++++++.+.+.+.++ ..+++.||+||+++++...... .....+.+|+|.++..++++|+++ +++++.|+.|
T Consensus 341 i~~gg~~l~~~~~~~~~~~~~-~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~G 418 (573)
T PRK05605 341 AFSGAMALPVSTVELWEKLTG-GLLVEGYGLTETSPIIVGNPMS-DDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEG 418 (573)
T ss_pred EEECCCcCCHHHHHHHHHHhC-CCeecccccchhchhhhcCCcc-cCCcCCccccCCCCCEEEEEcCCCCCccCCCCCee
Confidence 999999999999999998886 8999999999999876654322 133456899999999999999766 6899999999
Q ss_pred EEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 171 EIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 171 el~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
||+++++.++.+|+++++.+.+.| .+|||+|||+++++++|++++.||+||+++.+|++|+|++
T Consensus 419 el~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~e 482 (573)
T PRK05605 419 ELLVRGPQVFKGYWNRPEETAKSF-LDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAE 482 (573)
T ss_pred EEEEecCchhhhhcCChhHhhhcc-cCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHH
Confidence 999999999999999999998888 5679999999999999999999999999999999999864
No 37
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8e-36 Score=256.39 Aligned_cols=220 Identities=22% Similarity=0.331 Sum_probs=193.7
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|+++...|++|..++ ..++.+++.|+++++.+.+++..+++.++++++|++.++|+++..+.+... ...
T Consensus 179 ~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~ 253 (487)
T PRK07638 179 FHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR----VIE 253 (487)
T ss_pred cCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC----cCC
Confidence 345677999999999999887 678899999999999999999999999999999999999999999987632 234
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
+.+.++.+|+++++++.+++.+.|++.++++.||+||++.++..... ........+|+|++++.++++|+ ++++++.|
T Consensus 254 ~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d~-~g~~~~~g 331 (487)
T PRK07638 254 NKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDE-ESERRPNSVGRPFHNVQVRICNE-AGEEVQKG 331 (487)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEeccc-ccCCCCCCCCcccCCcEEEEECC-CCCCCCCC
Confidence 56677889999999999999999988999999999999987665432 22445568999999999999995 78999999
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||+++++.++.||+++++.+.+.+ .+|||+|||++++|++|++++.||++|+|+++|++|+|.+
T Consensus 332 ~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~e 398 (487)
T PRK07638 332 EIGTVYVKSPQFFMGYIIGGVLARELN-ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEE 398 (487)
T ss_pred CCeEEEEecccceeeecCCHHHHhhhc-cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHH
Confidence 999999999999999999988776654 7899999999999999999999999999999999999853
No 38
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=6.4e-36 Score=257.86 Aligned_cols=223 Identities=31% Similarity=0.479 Sum_probs=199.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
....++|++++.+|++|..|+...++.++..|+++++.+..++..+++.+. ++|++.++|+++..+++........++
T Consensus 192 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~ 269 (504)
T PRK07514 192 WRFTPDDVLIHALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAA 269 (504)
T ss_pred hCCCCccEEEEecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCccccc
Confidence 345667999999999999999778889999999999999899999999994 699999999999999887766666788
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.++.||+++++++.+.+.+.++ .++++.||+||++....... ........+|.|+++++++++|++++++++.|
T Consensus 270 ~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~--~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g 346 (504)
T PRK07514 270 HMRLFISGSAPLLAETHREFQERTG-HAILERYGMTETNMNTSNPY--DGERRAGTVGFPLPGVSLRVTDPETGAELPPG 346 (504)
T ss_pred ceeeEEecCCCCCHHHHHHHHHHhC-CcceeecccccccccccCCc--cccccCcccccCCCCcEEEEEECCCCCCCCCC
Confidence 9999999999999999999999886 89999999999986544322 11334567899999999999998899999999
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||+++++.++.||+++++.+++.|..++||+|||+++++++|.+++.||+||+|+++|++|+|.+
T Consensus 347 ~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~ 414 (504)
T PRK07514 347 EIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKE 414 (504)
T ss_pred CceEEEEecCCccccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHH
Confidence 99999999999999999999999988877899999999999999999999999999999999999864
No 39
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-35 Score=258.39 Aligned_cols=227 Identities=31% Similarity=0.512 Sum_probs=201.2
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++..|++|.+|+...++.++..|+++++.. .+++..+++.++++++|++.++|+++..+.+.......++
T Consensus 237 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~ 316 (558)
T PRK12583 237 LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDL 316 (558)
T ss_pred hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCc
Confidence 344567999999999999999889999999999999754 5789999999999999999999999988887766666678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC-CCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
+++|.++.+|+++++++.+++.+.++...+++.||+||+++++....... .......+|+|.+++.++++|++ +++++
T Consensus 317 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~ 395 (558)
T PRK12583 317 SSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVP 395 (558)
T ss_pred hhheEEEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCC
Confidence 99999999999999999999999998678999999999998776543221 12345688999999999999975 89999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++++.++.||++++..+...+..++||+|||+++++++|++++.||+||+|+.+|.+|+|++
T Consensus 396 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~ 465 (558)
T PRK12583 396 RGEIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPRE 465 (558)
T ss_pred CCCeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHH
Confidence 9999999999999999999999988887777899999999999999999999999999999999999863
No 40
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-35 Score=254.26 Aligned_cols=222 Identities=29% Similarity=0.442 Sum_probs=194.6
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++.+|++|..|++..++.++..|+++++.+.+++..+++.++ ++++++.++|+++..+.+.... ...++
T Consensus 164 ~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~ 241 (471)
T PRK07787 164 WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-ARALR 241 (471)
T ss_pred cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-ccccc
Confidence 445567999999999999999888999999999999998899999999999 9999999999999999875433 23578
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC-C
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP-P 166 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~-~ 166 (235)
++|.++.||+++++++.+++.+.++ .++++.||+||++........ .....+.+|+|+++++++++|+ ++++++ .
T Consensus 242 ~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~--~~~~~~~vG~~~~g~~~~i~d~-~~~~~~~~ 317 (471)
T PRK07787 242 GARLLVSGSAALPVPVFDRLAALTG-HRPVERYGMTETLITLSTRAD--GERRPGWVGLPLAGVETRLVDE-DGGPVPHD 317 (471)
T ss_pred ceeEEEECCCCCCHHHHHHHHHHcC-CCeecccCccccCcceecCCC--CcccCCcccccCCCcEEEEECC-CCCCCCCC
Confidence 9999999999999999999999886 899999999999865443322 2344568999999999999996 577786 4
Q ss_pred CC-ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEecc-CCceEeccEEeecCC
Q 026632 167 NQ-LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI-KELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~-~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~-~d~i~~~G~~v~p~~ 235 (235)
|+ .|||+++|+.++.+|+++++.+.+.+..++||+|||+++++++|++++.||+ ||+++.+|++|+|.+
T Consensus 318 ~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~e 388 (471)
T PRK07787 318 GETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGE 388 (471)
T ss_pred CCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHH
Confidence 54 7999999999999999999999998877899999999999999999999996 899999999999864
No 41
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-35 Score=265.09 Aligned_cols=220 Identities=20% Similarity=0.295 Sum_probs=191.8
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...+.|++++..|++|.+++...++.++..|+++++.+ .+++..+++.++++++|+++++|+++..+.+... ...+
T Consensus 182 ~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~ 259 (705)
T PRK06060 182 LRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSF 259 (705)
T ss_pred hCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccc
Confidence 345567999999999999998777889999999999987 4688999999999999999999999999887543 2356
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.||+++++++.+.+.+.|++.++++.||+||++.+....... ......+|+|+++++++++|+ ++++++.
T Consensus 260 ~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d~-~g~~~~~ 336 (705)
T PRK06060 260 RSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVAP-DGTTAGP 336 (705)
T ss_pred cceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCC--CCCcCcccccCCCcEEEEECC-CCCCCCC
Confidence 8999999999999999999999999878999999999998655433221 234567899999999999995 7899999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||+++|+.++.||+++++.+. ..++||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 337 g~~GEl~i~g~~v~~GY~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~e 402 (705)
T PRK06060 337 GVEGDLWVRGPAIAKGYWNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPRE 402 (705)
T ss_pred CCceEEEEccchhhhhhhCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHH
Confidence 9999999999999999999988653 35789999999999999999999999999999999999864
No 42
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=1.5e-35 Score=258.13 Aligned_cols=225 Identities=28% Similarity=0.411 Sum_probs=198.7
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
....++|++++.+|++|.+|++..++.+++.|+++++.+.+++..+++.++++++++++++|+.+..+++........++
T Consensus 223 ~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~ 302 (547)
T PRK06087 223 LNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLS 302 (547)
T ss_pred cCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCC
Confidence 34567799999999999999988899999999999999999999999999999999999998888888877655566788
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.++.||+++++++.+.+.+. ++++++.||+||++++................|.|++++.++++| +++++++.|
T Consensus 303 ~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g 379 (547)
T PRK06087 303 ALRFFLCGGTTIPKKVARECQQR--GIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPG 379 (547)
T ss_pred CeEEEEEcCCCCCHHHHHHHHHc--CCcEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCC
Confidence 99999999999999999988765 599999999999998766543222123345689999999999999 478999999
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||+++++.++.||+++++.+...+..++||+|||+++++++|++++.||.+|+|+.+|++|+|.+
T Consensus 380 ~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~ 447 (547)
T PRK06087 380 CEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSRE 447 (547)
T ss_pred CcceEEEecccccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHH
Confidence 99999999999999999999998888877899999999999999999999999999999999999853
No 43
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.2e-35 Score=253.25 Aligned_cols=221 Identities=33% Similarity=0.484 Sum_probs=193.2
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++.+|++|.+++ ..++.++..|+++++.+..++..+++.++++++|++.++|+++..+.+..... ....
T Consensus 177 ~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~ 254 (483)
T PRK03640 177 LGLTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPS 254 (483)
T ss_pred cCCCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCC
Confidence 345677999999999999998 56788899999999999999999999999999999999999999998764333 2346
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.++.+|+++++++.+.+++. ++++++.||+||++..+............+.+|+|++++++++.++ +++++.|
T Consensus 255 ~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~~g 330 (483)
T PRK03640 255 SFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD--GVVVPPF 330 (483)
T ss_pred cceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecC--CCcCCCC
Confidence 89999999999999999998875 5999999999999865444333322345678999999999999884 4889999
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||++++|.++.||+++++.+...+ .++||+|||+++++++|.+++.||+||++|.+|++|+|.+
T Consensus 331 ~~Gel~v~g~~~~~gy~~~~~~~~~~~-~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ 397 (483)
T PRK03640 331 EEGEIVVKGPNVTKGYLNREDATRETF-QDGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAE 397 (483)
T ss_pred CceEEEEECcchhhhhcCCHHHHHHHH-hcCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHH
Confidence 999999999999999999999888887 7899999999999999999999999999999999999853
No 44
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.3e-35 Score=257.22 Aligned_cols=220 Identities=30% Similarity=0.462 Sum_probs=185.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-------CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-------KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-------~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~ 80 (235)
+...++|+.++++|++|.+++ ..|+++++.+ .+++..+++.++++++|+++++|+++..|.+...
T Consensus 210 ~~~~~~~~~~~~~pl~~~~~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 281 (552)
T PRK09274 210 YGIEPGEIDLPTFPLFALFGP--------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGE 281 (552)
T ss_pred hCCCCCceeeeccCHHHhhhh--------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhh
Confidence 345567999999999987654 3477777754 3589999999999999999999999999998766
Q ss_pred cCCCCCCCceEEEecccCCcHHHHHHHHHhCCC-CceeccccccccccccccccCC------C--CCCCCCcccccCCCc
Q 026632 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS-ATVIQGYGLTETSGIATMENSF------A--GSRNIGSAGALAPGV 151 (235)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~-~~i~~~yG~tE~g~~~~~~~~~------~--~~~~~~~~g~p~~~~ 151 (235)
.....++++|.+++||+++++++.+++.+.|+. +++++.||+||+++++...... . .......+|+|++++
T Consensus 282 ~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 361 (552)
T PRK09274 282 ANGIKLPSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGV 361 (552)
T ss_pred hcCCCCchhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCc
Confidence 566678999999999999999999999999973 7999999999998765543211 0 011123589999999
Q ss_pred EEEEEeCC--------CCccCCCCCceEEEEEcCcccccccCCcccccccc--cCCC--eEecCceEEEcCCCcEEEEec
Q 026632 152 EALIVSVD--------TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI--DKKG--WVHTGDLGYFDGDGQLYVVDR 219 (235)
Q Consensus 152 ~~~~~d~~--------~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~--~~~g--~~~TgDl~~~~~~g~~~~~GR 219 (235)
+++++|++ ++++++.|+.|||++++|.++.||+++++.+...+ +.+| ||+|||+|++|++|++++.||
T Consensus 362 ~~~ivd~~~~~~~~~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR 441 (552)
T PRK09274 362 EVRIIAISDAPIPEWDDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGR 441 (552)
T ss_pred eEEEEeccccccccccccccCCCCCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEec
Confidence 99999953 46789999999999999999999999999887765 3456 999999999999999999999
Q ss_pred cCCceEeccEEeecCC
Q 026632 220 IKELIKYKGFQVTSNW 235 (235)
Q Consensus 220 ~~d~i~~~G~~v~p~~ 235 (235)
.||+|+++|++|+|+|
T Consensus 442 ~~d~i~~~G~~v~p~e 457 (552)
T PRK09274 442 KAHRVETAGGTLYTIP 457 (552)
T ss_pred cCCeEEECCEEECcHH
Confidence 9999999999999975
No 45
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-35 Score=255.41 Aligned_cols=218 Identities=25% Similarity=0.376 Sum_probs=189.4
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCCCCC
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFDLS 87 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~l~ 87 (235)
...+|+++..+|++|.+|+ ..++.++..|+++++.+.++++.+++.++++++|++.++|+++..+++.... ...+++
T Consensus 234 ~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~ 312 (537)
T PRK13382 234 WRAEEPTVIVAPMFHAWGF-SQLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGR 312 (537)
T ss_pred CCCCCeEEEecChHhhhHH-HHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCcc
Confidence 3467899999999999999 6788899999999999899999999999999999999999999999876432 223456
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.++.||+++++++++.+.+.++ ..+++.||+||++.++...... .....+++|+|.++++++++|+ ++++++.|
T Consensus 313 ~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~vG~p~~~~~~~i~d~-~~~~~~~g 389 (537)
T PRK13382 313 SLRFAAASGSRMRPDVVIAFMDQFG-DVIYNNYNATEAGMIATATPAD-LRAAPDTAGRPAEGTEIRILDQ-DFREVPTG 389 (537)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHcC-CcEEecccccccCcceecChhH-hccCCCCccccCcCcEEEEECC-CCCCCCCC
Confidence 8999999999999999999999997 7899999999999766543321 2345578999999999999996 78999999
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||++++|.++.||+ ++.+.. + .+|||+|||+++++++|++++.||+||+|+++|++|+|.+
T Consensus 390 ~~GEl~v~g~~~~~gY~--~~~~~~-~-~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~e 453 (537)
T PRK13382 390 EVGTIFVRNDTQFDGYT--SGSTKD-F-HDGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIE 453 (537)
T ss_pred CeeEEEEEcCCcccCcc--ccchhh-c-cCCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHH
Confidence 99999999999999998 444443 3 4799999999999999999999999999999999999863
No 46
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-35 Score=257.56 Aligned_cols=221 Identities=39% Similarity=0.700 Sum_probs=196.3
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceE
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 91 (235)
.++++++++|++|.+|+...+..++..|+++++.+++++..+++.++++++|++.++|+++..+.+........++++|.
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 327 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRA 327 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhh
Confidence 34788999999999998777778999999999998899999999999999999999999999998876555556789999
Q ss_pred EEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceE
Q 026632 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (235)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Ge 171 (235)
++.||+++++++.+++.+.++ .++++.||+||++.++...... .....+..|+|+++..+++++++++++++.|+.||
T Consensus 328 v~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Ge 405 (563)
T PRK06710 328 CISGSAPLPVEVQEKFETVTG-GKLVEGYGLTESSPVTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGE 405 (563)
T ss_pred eeeCCCcCCHHHHHHHHHhhC-CCEecccccccCccccccCccc-ccccCCccCCCCCCCeEEEEECCCCccCCCCCceE
Confidence 999999999999999999885 8999999999999765433221 12334678999999999999988899999999999
Q ss_pred EEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 172 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 172 l~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+++++.++.+|+++++.+...+ .+|||+|||+++++++|++++.||.||+|+++|.+|+|++
T Consensus 406 l~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~e 468 (563)
T PRK06710 406 IVVKGPQIMKGYWNKPEETAAVL-QDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPRE 468 (563)
T ss_pred EEEecCccchhhhCChHHHhhhc-ccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHH
Confidence 99999999999999999988877 6899999999999999999999999999999999999864
No 47
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-35 Score=255.69 Aligned_cols=221 Identities=31% Similarity=0.492 Sum_probs=195.4
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
.++|++++..|++|.+|+ ..++.++..|+++++.+ .+++..+++.++++++|.++++|+++..+++........ .+
T Consensus 214 ~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~ 291 (542)
T PRK07786 214 INSDVGFVGVPLFHIAGI-GSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LA 291 (542)
T ss_pred CCCceEEEecchHHHHHH-HHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cc
Confidence 456999999999999998 68889999999999875 579999999999999999999999999998875543322 37
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++.||+++++++++.+.+.|++.++++.||+||++.+...............+|+|++++.++++|+ +++.++.|+
T Consensus 292 lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~~~~~g~ 370 (542)
T PRK07786 292 LRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDE-NMNDVPVGE 370 (542)
T ss_pred eEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECC-CCCCCcCCC
Confidence 9999999999999999999999988999999999999977664433322345578999999999999995 789999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++++.++.||+++++.+...| .++||+|||+++++++|++++.||.||+|+++|++|+|++
T Consensus 371 ~Gel~v~g~~~~~gy~~~~~~~~~~f-~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~e 436 (542)
T PRK07786 371 VGEIVYRAPTLMSGYWNNPEATAEAF-AGGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAE 436 (542)
T ss_pred ceEEEEEChhhhhhhcCCHHHHHHHh-hCCcccccceEEEcCCceEEEEecccceEEeCCEEECHHH
Confidence 99999999999999999999998888 6899999999999999999999999999999999999864
No 48
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-35 Score=251.04 Aligned_cols=223 Identities=28% Similarity=0.451 Sum_probs=194.3
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHH--hccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIE--KHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~--~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
...+|++++.+|++|.+|+...++.++..|+++++.+.+++..++..+. ++++|.++++|+++..+.+........++
T Consensus 173 ~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 252 (488)
T PRK09088 173 VDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALR 252 (488)
T ss_pred CCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccc
Confidence 4567999999999999999888889999999999998889999998886 47899999999999998876655555678
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCC-CCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF-AGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~-~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
++|.++.||++++.+..+.+.+. ++++++.||+||++.+....... ....+.+++|.|+++++++++|+ ++++++.
T Consensus 253 ~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~-~~~~~~~ 329 (488)
T PRK09088 253 HLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDD-QGNDCPA 329 (488)
T ss_pred cceEEEecCCCCCHHHHHHHHHh--CCceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECC-CCCCCcC
Confidence 99999999999999998888765 58999999999998754322111 11234567999999999999995 7899999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||++++|.++.||+++++.+++.+..+|||+|||+++++++|.+++.||.||+|+.+|++|+|++
T Consensus 330 g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~ 398 (488)
T PRK09088 330 GVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAE 398 (488)
T ss_pred CCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHH
Confidence 999999999999999999999999888877999999999999999999999999999999999999864
No 49
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6e-35 Score=255.13 Aligned_cols=220 Identities=32% Similarity=0.557 Sum_probs=194.8
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceE
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 91 (235)
++++++.+|++|.+++....+..+..|+..++.. +.++..+++.++++++|.+.++|+++..+.+........++++|.
T Consensus 258 ~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~ 337 (562)
T PRK12492 258 QEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKL 337 (562)
T ss_pred CeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeE
Confidence 3678999999999999777788888888776654 568999999999999999999999999999877666667889999
Q ss_pred EEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceE
Q 026632 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (235)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Ge 171 (235)
+++||+++++++.+.+.+.++ +++++.||+||++.++...... .....+.+|+|+++++++++|+ +++++++|+.||
T Consensus 338 ~~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~~v~ivd~-~~~~~~~g~~Ge 414 (562)
T PRK12492 338 TNSGGTALVKATAERWEQLTG-CTIVEGYGLTETSPVASTNPYG-ELARLGTVGIPVPGTALKVIDD-DGNELPLGERGE 414 (562)
T ss_pred EEeccccCCHHHHHHHHHHhC-CceeeccCccccCceeeecCCc-ccccCCccceecCCCEEEEECC-CCCCCCCCCceE
Confidence 999999999999999999886 9999999999998876544322 1334567899999999999996 789999999999
Q ss_pred EEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 172 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 172 l~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+++++.++.||+++++.+.+.|..++||+|||+++++++|++++.||.||+|+++|++|+|++
T Consensus 415 l~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~e 478 (562)
T PRK12492 415 LCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNE 478 (562)
T ss_pred EEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHH
Confidence 9999999999999999999888877899999999999999999999999999999999999864
No 50
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1e-35 Score=253.21 Aligned_cols=218 Identities=32% Similarity=0.487 Sum_probs=187.4
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCC------------
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL------------ 80 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~------------ 80 (235)
+|++++++|+.|++... .-...+..|+++.+..+ |+..+.+.|++.+||.+.++|.+++.+-+..+
T Consensus 302 ~dv~lSyLPLAHi~er~-~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~ 379 (691)
T KOG1256|consen 302 DDVYLSYLPLAHIFERV-VELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRK 379 (691)
T ss_pred CceEEEeCcHHHHHHHH-HHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHH
Confidence 59999999999999995 55555588999999874 99999999999999999999998774332110
Q ss_pred --------------cCCCCC-------------------CCceEEEecccCCcHHHHHHHHHhCCCCceecccccccccc
Q 026632 81 --------------VKKFDL-------------------SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSG 127 (235)
Q Consensus 81 --------------~~~~~l-------------------~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~ 127 (235)
..+... .++|.+++|++|+++++.+.++..++ +++++.||+||+.+
T Consensus 380 l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-~~v~eGYGlTEts~ 458 (691)
T KOG1256|consen 380 LFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-CRVLEGYGLTETSA 458 (691)
T ss_pred HHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC-ceeeecccccccCC
Confidence 011111 48999999999999999999999986 99999999999996
Q ss_pred ccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEE
Q 026632 128 IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGY 207 (235)
Q Consensus 128 ~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~ 207 (235)
.++..... +...+++|.|+|+.+++++|+.+-+--..|..|||||+|+.++.||+++|+.|++.++.+||++|||+|+
T Consensus 459 g~~~~~~~--d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~ 536 (691)
T KOG1256|consen 459 GTTLTLPG--DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGE 536 (691)
T ss_pred ceEeccCC--CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhcccccccccccee
Confidence 55554443 3478999999999999999987777777777899999999999999999999999999999999999999
Q ss_pred EcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 208 FDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 208 ~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
++++|.+.|+||+|+++|+ .|+.|.|++
T Consensus 537 ~~p~G~l~IidRkK~ifklaqGEyVaPe~ 565 (691)
T KOG1256|consen 537 WDPNGTLKIIDRKKNIFKLAQGEYVAPEK 565 (691)
T ss_pred ECCCccEEEEecccceEEcCCCCccChHH
Confidence 9999999999999999999 799999863
No 51
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-35 Score=260.07 Aligned_cols=227 Identities=24% Similarity=0.336 Sum_probs=192.4
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc----CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA----KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-- 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~----~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-- 81 (235)
+...++|++++..|++|..++...++.++..|+++++.+ .+++..+++.++++++|++.++|++++.+.+....
T Consensus 270 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~ 349 (629)
T PRK10524 270 FGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALL 349 (629)
T ss_pred cCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccc
Confidence 445667999999999999998778899999999999976 34789999999999999999999999988875432
Q ss_pred CCCCCCCceEEEecccCCcHHHHHHHHHhCCCCceecccccccccccccc-ccC-CCCCCCCCcccccCCCcEEEEEeCC
Q 026632 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATM-ENS-FAGSRNIGSAGALAPGVEALIVSVD 159 (235)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~-~~~-~~~~~~~~~~g~p~~~~~~~~~d~~ 159 (235)
...+++++|.++++|+++++++.+++.+.++ .++++.||+||++..... .+. .......+++|+|+++++++++|++
T Consensus 350 ~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~ 428 (629)
T PRK10524 350 RKHDLSSLRALFLAGEPLDEPTASWISEALG-VPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEV 428 (629)
T ss_pred cccChhheeEEEEeCCCCCHHHHHHHHHhcC-CCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCC
Confidence 3346789999999999999999999999886 899999999999843322 221 1112345688999999999999976
Q ss_pred CCccCCCCCceEEEEEcC---cccccccCCccccccccc---CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeec
Q 026632 160 TQKPLPPNQLGEIWLRGP---NMMRGYYNNEQATKLTID---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 160 ~~~~v~~g~~Gel~v~~~---~~~~~y~~~~~~~~~~~~---~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
+|++++.|+.|||++++| ..+.+|+++++.+...+. .++||+|||+++++++|++++.||.||+||++|++|+|
T Consensus 429 ~g~~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p 508 (629)
T PRK10524 429 TGEPCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGT 508 (629)
T ss_pred CCCCCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCH
Confidence 899999999999999998 477899999877665432 46899999999999999999999999999999999998
Q ss_pred CC
Q 026632 234 NW 235 (235)
Q Consensus 234 ~~ 235 (235)
.|
T Consensus 509 ~e 510 (629)
T PRK10524 509 RE 510 (629)
T ss_pred HH
Confidence 64
No 52
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-35 Score=253.70 Aligned_cols=223 Identities=34% Similarity=0.527 Sum_probs=197.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++.+|++|.+|+ .++.+++.|+++++.+++++..+++.++++++|++.++|+++..+++........++
T Consensus 204 ~~~~~~~~~l~~~pl~~~~g~--~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~ 281 (524)
T PRK06188 204 WEWPADPRFLMCTPLSHAGGA--FFLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLS 281 (524)
T ss_pred cCCCcCcEEEEecCchhhhhH--HHHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCc
Confidence 344567999999999999887 357889999999999999999999999999999999999999999988766666789
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC----CCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA----GSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~----~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
++|.++.||++++++..+.+.+.++ ..+++.||+||++.++....... ......++|+|++++.++++|+ ++++
T Consensus 282 ~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~-~~~~ 359 (524)
T PRK06188 282 SLETVYYGASPMSPVRLAEAIERFG-PIFAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDE-DGRE 359 (524)
T ss_pred ceeEEEEcCCCCCHHHHHHHHHHhC-chhhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcC-CCCC
Confidence 9999999999999999999999887 77999999999976555432211 1234467899999999999996 6899
Q ss_pred CCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|+.|||+++++.++.||++++..+...+ .+|||+|||+++++++|++++.||.+|+|+++|++|+|++
T Consensus 360 ~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~ 430 (524)
T PRK06188 360 VAQGEVGEICVRGPLVMDGYWNRPEETAEAF-RDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPRE 430 (524)
T ss_pred CCCCCeeEEEEECcchhhhhcCChHHhhhhh-cCCceeecceEEEcCCccEEEEeccccceecCCEEECHHH
Confidence 9999999999999999999999999888887 7899999999999999999999999999999999999863
No 53
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=8.4e-35 Score=244.48 Aligned_cols=223 Identities=26% Similarity=0.335 Sum_probs=194.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCC---HHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD---LEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~---~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
+...+.|++++..|++|.+++ ..++.++..|+++++.++.. +..+.+.++++++|.+.++|++++.+.+... .
T Consensus 156 ~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~ 231 (408)
T TIGR01733 156 YGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---P 231 (408)
T ss_pred cCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---h
Confidence 344567999999999999998 68899999999999987643 6889999999999999999999999988764 4
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC-CC--CCCcccccCCCcEEEEEeCCCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SR--NIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~-~~--~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
.++++|.++.+|+++++++.+++.+.++++.+++.||+||+++++........ .. ....+|.|++++++++++++ +
T Consensus 232 ~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~-~ 310 (408)
T TIGR01733 232 ALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDD-L 310 (408)
T ss_pred cccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCC-C
Confidence 67899999999999999999999999987899999999999987753322211 11 25679999999999999975 8
Q ss_pred ccCCCCCceEEEEEcCcccccccCCcccccccccCC------C--eEecCceEEEcCCCcEEEEeccCCceEeccEEeec
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK------G--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~------g--~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
+++++|+.|||+++++.++.+|+++++.+.+.+... + ||+|||+++++++|++++.||.||+|+++|++|+|
T Consensus 311 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i~~~G~~v~~ 390 (408)
T TIGR01733 311 RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQVKIRGYRIEL 390 (408)
T ss_pred CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEEEeCeEEech
Confidence 999999999999999999999999999888777332 3 99999999999999999999999999999999998
Q ss_pred CC
Q 026632 234 NW 235 (235)
Q Consensus 234 ~~ 235 (235)
++
T Consensus 391 ~~ 392 (408)
T TIGR01733 391 GE 392 (408)
T ss_pred HH
Confidence 74
No 54
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.8e-36 Score=239.44 Aligned_cols=228 Identities=29% Similarity=0.405 Sum_probs=203.6
Q ss_pred eeeccCCCCcEEEEecChhHHHhHHH-HHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 5 DQETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 5 ~~~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
...|...++++.++.+|..|-+-+.. ..+..++.|+++|+.+..+++.....|+++++|+...+|.+...+++..+...
T Consensus 222 aEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~ 301 (542)
T COG1021 222 AEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWER 301 (542)
T ss_pred hhhhCcCccceEEEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhccc
Confidence 34566677899999999999877632 46788999999999999999999999999999999999999999999888888
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccC-CCcEEEEEeCCCCc
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQK 162 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~d~~~~~ 162 (235)
.+++++|.+=.||..+++++.+++...++ +.+-.+|||.|.-..-+.. .+..+....+-|+|+ |.-+++++| ++|+
T Consensus 302 ~~LsSLrllQVGGarl~~~~Arrv~~~lg-C~LQQVFGMAEGLvnyTRL-DDp~E~i~~TQGrPlsP~DEvrvvD-~dg~ 378 (542)
T COG1021 302 ADLSSLRLLQVGGARLSATLARRVPAVLG-CQLQQVFGMAEGLVNYTRL-DDPPEIIIHTQGRPLSPDDEVRVVD-ADGN 378 (542)
T ss_pred CCchheeEEeecCcccCHHHHhhchhhhC-chHHHHhhhhhhhhccccc-CCchHheeecCCCcCCCcceeEEec-CCCC
Confidence 89999999999999999999999999997 9999999999987554432 222244456778888 778999999 5999
Q ss_pred cCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 163 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 163 ~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+|++||.|+|..+||..++|||+.|+-++..|+.+|+|+|||+++++++|++.+.||.||.||.+|+||..+|
T Consensus 379 pv~pGE~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeE 451 (542)
T COG1021 379 PVAPGEVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEE 451 (542)
T ss_pred CCCCCCcceeeecCCeeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997653
No 55
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=8.1e-35 Score=252.99 Aligned_cols=226 Identities=26% Similarity=0.380 Sum_probs=195.2
Q ss_pred eccCCCCcEEEEecChhHHHhHHH-HHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcC--CcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHG--LVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~--~~~~ 83 (235)
.+...++|++++.+|++|.+++.. .++.++..|+++++.+.+++..+++.+++++++++.++|+++..+++.. ....
T Consensus 217 ~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 296 (536)
T PRK10946 217 ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSR 296 (536)
T ss_pred hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCcc
Confidence 344567799999999999988743 5788899999999998889999999999999999999999999988763 2233
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccC-CCcEEEEEeCCCCc
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQK 162 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~d~~~~~ 162 (235)
..++++|.++.||+++++++.+.+.+.++ +++++.||+||+...... ..........++|.|+ +++.++++|+ +++
T Consensus 297 ~~~~~l~~v~~gg~~l~~~~~~~~~~~~g-~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~v~i~d~-~~~ 373 (536)
T PRK10946 297 AQLASLKLLQVGGARLSETLARRIPAELG-CQLQQVFGMAEGLVNYTR-LDDSDERIFTTQGRPMSPDDEVWVADA-DGN 373 (536)
T ss_pred ccccceeEEEECCCCCCHHHHHHHHHhcC-CeEEEeecccccceeeec-CCCccccccccCCcccCCCceEEEECC-CCC
Confidence 45789999999999999999999999886 999999999997543322 1111123456789998 7899999994 789
Q ss_pred cCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 163 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 163 ~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++|+.|||+++|+.++.||+++++.+.+.+..++||+|||+++++++|++++.||.+|+|+++|++|+|.+
T Consensus 374 ~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~e 446 (536)
T PRK10946 374 PLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEE 446 (536)
T ss_pred CCCCCCccEEEEecCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHH
Confidence 9999999999999999999999999999998888999999999999999999999999999999999999853
No 56
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-35 Score=260.75 Aligned_cols=226 Identities=26% Similarity=0.401 Sum_probs=184.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC--C--CHHHHHHHHHhccc---eEEeecHHHHHHHHhc--
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F--DLEMFLRAIEKHRV---THIWVVPPLILALAKH-- 78 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~--~--~~~~~~~~l~~~~~---t~~~~~p~~~~~l~~~-- 78 (235)
+...++|++++++|++|.+|+. .++.+++.|+++++.++ + ++..+++.+.++++ +.+.+.|+++..+...
T Consensus 216 ~~~~~~d~~l~~~Pl~h~~gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~ 294 (631)
T PRK07769 216 LEGQEGDRGVSWLPFFHDMGLI-TVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARG 294 (631)
T ss_pred cCCCCcceEEEeCCCcCchhhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhc
Confidence 3445679999999999999995 45566677888887653 4 89999999998876 7889999987766643
Q ss_pred -CC--cCCCCCCCceEEEecccCCcHHHHHHHHHhCC-----CCceeccccccccccccccccCCCCC------------
Q 026632 79 -GL--VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAGS------------ 138 (235)
Q Consensus 79 -~~--~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~i~~~yG~tE~g~~~~~~~~~~~~------------ 138 (235)
.. ....+++++|.+++||+++++++.+++.+.|+ +..+++.||+||++.++.........
T Consensus 295 ~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (631)
T PRK07769 295 LPKDGEPPLDLSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNA 374 (631)
T ss_pred cchhcccCcchhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhC
Confidence 11 11346789999999999999999999999873 24699999999998655543211100
Q ss_pred -------------CCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCccccccccc----------
Q 026632 139 -------------RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID---------- 195 (235)
Q Consensus 139 -------------~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~---------- 195 (235)
....++|+|.++..++++|++++++++.|+.|||+++||+++.||+++++.+++.|.
T Consensus 375 ~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~ 454 (631)
T PRK07769 375 GRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSES 454 (631)
T ss_pred CCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccc
Confidence 012368999999999999987899999999999999999999999999999888773
Q ss_pred -------CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 196 -------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 196 -------~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.+|||+|||+|+++ +|++++.||+||+||++|++|+|.|
T Consensus 455 ~~~~~~~~~gw~~TGDlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~e 500 (631)
T PRK07769 455 HAEGAPDDALWVRTGDYGVYF-DGELYITGRVKDLVIIDGRNHYPQD 500 (631)
T ss_pred cccCcccCCCeeeccccccEE-CCEEEEEcccccEEEECCeeeCHHH
Confidence 24899999999994 8999999999999999999999864
No 57
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-34 Score=252.33 Aligned_cols=223 Identities=29% Similarity=0.450 Sum_probs=190.4
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
...++|++++++|++|.+|+ ..++.++..|+++++.+.+++..+++.++++++|+++++|+++..+.+.. .....+++
T Consensus 218 ~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~ 295 (540)
T PRK06164 218 GYDPGAVLLAALPFCGVFGF-STLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPS 295 (540)
T ss_pred CCCCCCEEEEcCCchhHHHH-HHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcc
Confidence 34577999999999999999 57899999999999999999999999999999999999999999998873 23446788
Q ss_pred ceEEEecc-cCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC-CCCCCcccccC-CCcEEEEEeCCCCccCC
Q 026632 89 LKLVGSGA-APLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-SRNIGSAGALA-PGVEALIVSVDTQKPLP 165 (235)
Q Consensus 89 lr~i~~~G-~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~-~~~~~~~g~p~-~~~~~~~~d~~~~~~v~ 165 (235)
+|.+..++ .+...++.+++.+. ++++++.||+||++++......... .......|.|. +++.++++|++++++++
T Consensus 296 l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 373 (540)
T PRK06164 296 ARLFGFASFAPALGELAALARAR--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLP 373 (540)
T ss_pred eeeeeeccCCcchHHHHHHHhhc--CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCC
Confidence 99886665 55667777777765 5899999999999876654432211 11223456665 88999999988999999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++|+.++.||+++++.+...+..++||+|||+|+++++|.+++.||.||+|+++|++|+|++
T Consensus 374 ~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~e 443 (540)
T PRK06164 374 DGESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAE 443 (540)
T ss_pred CCCeeEEEEecccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHH
Confidence 9999999999999999999999999998888899999999999999999999999999999999999864
No 58
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.8e-35 Score=252.66 Aligned_cols=221 Identities=26% Similarity=0.374 Sum_probs=186.0
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCc
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSL 89 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~l 89 (235)
...++++++.+|++|.++++ .++.+++.|+++++. +.++..+++.++++++|++.++|+++..+.+........++++
T Consensus 211 ~~~~~~~~~~~p~~h~~~l~-~~~~~l~~G~~~v~~-~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~l 288 (540)
T PRK05857 211 WVVGETTYSPLPATHIGGLW-WILTCLMHGGLCVTG-GENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSL 288 (540)
T ss_pred cccCceeeecCCccccchHH-HHHHHhhcceeEEec-CCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccc
Confidence 34568999999999999994 677889999988764 4688999999999999999999999999988776666678999
Q ss_pred eEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---CCCCCcccccCCCcEEEEEeCCCCccC--
Q 026632 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---SRNIGSAGALAPGVEALIVSVDTQKPL-- 164 (235)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~~~d~~~~~~v-- 164 (235)
|.++.+|++++....++ .+.++ +++++.||+||++......+.... ....+++|+|+++++++++|++...++
T Consensus 289 r~~~~gG~~~~~~~~~~-~~~~g-~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~ 366 (540)
T PRK05857 289 RLVGYGGSRAIAADVRF-IEATG-VRTAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAP 366 (540)
T ss_pred eEEEEcCccCCchhHHH-HHHhC-CeeecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCcccc
Confidence 99999999999888764 45665 999999999999865433222111 123468999999999999996443333
Q ss_pred ---CCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 ---PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ---~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|+.|||++++|.++.||+++++.+.+.+ .+|||+|||++++|++|++++.||.||+||++|++|+|+|
T Consensus 367 ~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~e 439 (540)
T PRK05857 367 GAGPSASFGTLWIKSPANMLGYWNNPERTAEVL-IDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDE 439 (540)
T ss_pred ccCCCCCcceEEEeCcchhhhhhCCccchhhhc-CCCceeccceEEEcCCceEEEeccccccEecCCEEECHHH
Confidence 457899999999999999999999998888 6899999999999999999999999999999999999864
No 59
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-34 Score=250.58 Aligned_cols=224 Identities=28% Similarity=0.470 Sum_probs=193.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcC--C
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK--K 83 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~--~ 83 (235)
+....+|++++++|++|..|+...++.++..|+++++++ .+++..+++.++++++|.+.++|+++..+.+..... .
T Consensus 212 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 291 (534)
T PRK05852 212 YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSG 291 (534)
T ss_pred hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccccc
Confidence 345667999999999999999888999999999999864 478999999999999999999999999998865432 3
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC------CCCCCCcccccCCCcEEEEEe
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA------GSRNIGSAGALAPGVEALIVS 157 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~------~~~~~~~~g~p~~~~~~~~~d 157 (235)
..++++|.+..+|+++++++++.+.+.|+ .++++.||+||++.++....... .....+..|. .++++++++|
T Consensus 292 ~~~~~lr~i~~~G~~~~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d 369 (534)
T PRK05852 292 RKPAALRFIRSCSAPLTAETAQALQTEFA-APVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVG 369 (534)
T ss_pred ccCCCeeEEEECCCCCCHHHHHHHHHHhC-CChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEEC
Confidence 35789999999999999999999999996 89999999999997666432210 0112233444 6999999999
Q ss_pred CCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 158 VDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 158 ~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+ +++++++|+.|||+++++.++.||+++++.+.+.+ .+|||+|||++++|++|++++.||.+|+|+.+|.+|+|.+
T Consensus 370 ~-~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~~~-~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~ 445 (534)
T PRK05852 370 S-DGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAANF-TDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPER 445 (534)
T ss_pred C-CCCCCCCCCceEEEEecCcccchhcCCcccchhhh-cCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHH
Confidence 5 78999999999999999999999999999998887 6899999999999999999999999999999999999864
No 60
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-34 Score=250.09 Aligned_cols=224 Identities=39% Similarity=0.596 Sum_probs=198.8
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+...++|++++.+|++|.+++. ..+.++..|+++++.+.+++..+++.++++++|.++++|+++..+.+........+
T Consensus 202 ~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~ 280 (521)
T PRK06187 202 WLKLSRDDVYLVIVPMFHVHAWG-LPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDF 280 (521)
T ss_pred hhCCCCCCEEEEeCCchHHhhHH-HHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCc
Confidence 34456779999999999999995 44559999999999988899999999999999999999999999998887766788
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC----CCCCCcccccCCCcEEEEEeCCCCc
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG----SRNIGSAGALAPGVEALIVSVDTQK 162 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~----~~~~~~~g~p~~~~~~~~~d~~~~~ 162 (235)
+++|.++.+|+++++++.+++.+.| ++++++.||+||+++++........ .......|+|++++.++++|+ +++
T Consensus 281 ~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-~~~ 358 (521)
T PRK06187 281 SSLRLVIYGGAALPPALLREFKEKF-GIDLVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDD-DGD 358 (521)
T ss_pred chhhEEEEcCcCCCHHHHHHHHHHh-CcchheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECC-CCC
Confidence 9999999999999999999999998 4999999999999987665433211 125568899999999999996 678
Q ss_pred cCCC--CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 163 PLPP--NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 163 ~v~~--g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+++. |+.|||+++++.++.+|+++++.+.+.+ .++||+|||+++++++|.+++.||.+|+|+.+|.+++|.
T Consensus 359 ~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~-~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~ 431 (521)
T PRK06187 359 ELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETI-DGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPR 431 (521)
T ss_pred CCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHh-hCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHH
Confidence 8988 9999999999999999999999888887 677999999999999999999999999999999999985
No 61
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=5e-35 Score=260.75 Aligned_cols=222 Identities=27% Similarity=0.361 Sum_probs=176.7
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCC--------HHHHHHHHHhccceEEeecHHHHHHHHhcCCc
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD--------LEMFLRAIEKHRVTHIWVVPPLILALAKHGLV 81 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~--------~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~ 81 (235)
..++|++++++|++|.+++. .....+..|+++....... +..+++.++++++|++.++|+++..+.+....
T Consensus 289 ~~~~d~~l~~lPl~Hi~~~~-~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~ 367 (696)
T PLN02387 289 LGKNDVYLAYLPLAHILELA-AESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRK 367 (696)
T ss_pred CCCCCEEEEECcHHHHHHHH-HHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHH
Confidence 45679999999999999984 4444566777776644321 23456789999999999999999887643210
Q ss_pred C-------------------------------C----------------CCCCCceEEEecccCCcHHHHHHHHHhCCCC
Q 026632 82 K-------------------------------K----------------FDLSSLKLVGSGAAPLGKELMEECAKNVPSA 114 (235)
Q Consensus 82 ~-------------------------------~----------------~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~ 114 (235)
. . ...+++|.+++||+++++++.+.++..++ +
T Consensus 368 ~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g-~ 446 (696)
T PLN02387 368 KVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLG-A 446 (696)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcC-C
Confidence 0 0 00158999999999999999988887786 9
Q ss_pred ceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCC-CccC--CCCCceEEEEEcCcccccccCCccccc
Q 026632 115 TVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT-QKPL--PPNQLGEIWLRGPNMMRGYYNNEQATK 191 (235)
Q Consensus 115 ~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~-~~~v--~~g~~Gel~v~~~~~~~~y~~~~~~~~ 191 (235)
.+++.||+||+++.++..... +...+++|.|+|+++++++|.++ +..+ .+++.|||+++||.++.||+++|+.|.
T Consensus 447 ~v~~~YG~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~ 524 (696)
T PLN02387 447 PIGQGYGLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTD 524 (696)
T ss_pred CeeEeechhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHh
Confidence 999999999998766554332 34567899999999999999433 3333 344579999999999999999999999
Q ss_pred cccc--CCC--eEecCceEEEcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 192 LTID--KKG--WVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 192 ~~~~--~~g--~~~TgDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
+.|. .+| ||+|||+|++|++|+++|.||+||+||+ +|++|+|+|
T Consensus 525 ~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~e 573 (696)
T PLN02387 525 EVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGK 573 (696)
T ss_pred hhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHH
Confidence 9883 345 9999999999999999999999999998 699999964
No 62
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-35 Score=261.34 Aligned_cols=217 Identities=28% Similarity=0.428 Sum_probs=176.7
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHH-------HHHhccceEEeecHHHHHHHHhcCCc--
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLR-------AIEKHRVTHIWVVPPLILALAKHGLV-- 81 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~-------~l~~~~~t~~~~~p~~~~~l~~~~~~-- 81 (235)
.++|++++++|++|.++.. .....+..|+++++. ++..+.+ .++++++|++.++|++++.+.+....
T Consensus 308 ~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~ 383 (700)
T PTZ00216 308 EEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKL 383 (700)
T ss_pred CCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHH
Confidence 4679999999999999984 455667788877763 4555554 68899999999999998877542110
Q ss_pred -----------------------CC----------------CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccc
Q 026632 82 -----------------------KK----------------FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGL 122 (235)
Q Consensus 82 -----------------------~~----------------~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~ 122 (235)
.+ ...+++|.+++||+++++++.++++..++ ++++.||+
T Consensus 384 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~~~YG~ 461 (700)
T PTZ00216 384 PPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVIQGWGL 461 (700)
T ss_pred hccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHhhccCc
Confidence 00 00157999999999999999988877664 89999999
Q ss_pred cccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCC-ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEe
Q 026632 123 TETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ-KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVH 201 (235)
Q Consensus 123 tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~-~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~ 201 (235)
||+++++...... +...+++|+|+++++++++|.++. ...++++.|||+|+||.++.||+++|+.+++.|+.+|||+
T Consensus 462 TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~ 539 (700)
T PTZ00216 462 TETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFH 539 (700)
T ss_pred ccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCee
Confidence 9998766544332 345678999999999999996432 2345667899999999999999999999999998899999
Q ss_pred cCceEEEcCCCcEEEEeccCCceE-eccEEeecCC
Q 026632 202 TGDLGYFDGDGQLYVVDRIKELIK-YKGFQVTSNW 235 (235)
Q Consensus 202 TgDl~~~~~~g~~~~~GR~~d~i~-~~G~~v~p~~ 235 (235)
|||+|+++++|.+++.||+||+|| .+|++|+|+|
T Consensus 540 TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~e 574 (700)
T PTZ00216 540 TGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEA 574 (700)
T ss_pred ccceEEEcCCCcEEEEEehHhheecCCCceeccHH
Confidence 999999999999999999999998 7999999864
No 63
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-34 Score=248.49 Aligned_cols=219 Identities=22% Similarity=0.311 Sum_probs=189.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFDL 86 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~l 86 (235)
...++|+++..+|++|.+|+ ..++.++..|+++++.+.++++.+++.++++++|.+.++|+++..+.+..+. ....+
T Consensus 213 ~~~~~d~~~~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 291 (516)
T PRK13383 213 RLRTGSRISVAMPMFHGLGL-GMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPL 291 (516)
T ss_pred ccCCCCeEEEecCCcchhhH-HHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCC
Confidence 34567999999999999999 5678889999999998889999999999999999999999999998875432 12357
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.+++||+++++++.+++.+.|+ ..+++.||+||++..+...... .......+|+|+++++++++|+ ++++++.
T Consensus 292 ~~lr~i~~gG~~l~~~~~~~~~~~~g-~~v~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~-~~~~~~~ 368 (516)
T PRK13383 292 PQLRVVMSSGDRLDPTLGQRFMDTYG-DILYNGYGSTEVGIGALATPAD-LRDAPETVGKPVAGCPVRILDR-NNRPVGP 368 (516)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHcC-chhhhcccccccccceeccccc-cccCCCcccCCCCCcEEEEECC-CCCCCCC
Confidence 89999999999999999999999997 8899999999998765443321 1344568999999999999995 7899999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||+++++.++.+|++++.. .+ .+|||+|||+++++++|++++.||.||+|+++|++|+|++
T Consensus 369 g~~Gel~v~g~~~~~~Y~~~~~~---~~-~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~e 433 (516)
T PRK13383 369 RVTGRIFVGGELAGTRYTDGGGK---AV-VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRA 433 (516)
T ss_pred CCceEEEEecCcccccccCCchh---he-ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHH
Confidence 99999999999999999987542 22 5799999999999999999999999999999999999863
No 64
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.5e-34 Score=248.39 Aligned_cols=223 Identities=22% Similarity=0.323 Sum_probs=196.4
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+....+|+++..+|++|..++...++.++..|+++++.++ +++..+++.|+++++|++.++|+++..+++.........
T Consensus 198 ~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~ 277 (508)
T TIGR02262 198 LGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQ 277 (508)
T ss_pred cCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCcccccccc
Confidence 3455669999999999999997788889999999988764 689999999999999999999999888877654444456
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
.++|.++.+|+++++++.+.|.+.|+ +++++.||+||++.++...... +...+.+|+|++++.++++| ++++++++
T Consensus 278 ~~l~~~~~~G~~l~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d-~~~~~~~~ 353 (508)
T TIGR02262 278 VRLRLCTSAGEALPAEVGQRWQARFG-VDIVDGIGSTEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVG-DGGQDVAA 353 (508)
T ss_pred ccceeEEEcCCCCCHHHHHHHHHHhC-CchhhCccccccCceeecCCcc--CCCCCCcCCCCCCcEEEEEC-CCCCCCCC
Confidence 78999999999999999999999996 8999999999999766543222 33456789999999999999 68999999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||+++++.++.+|+++++.+...+ .++||+|||+++++++|.+++.||.||+|+.+|++|+|.+
T Consensus 354 g~~Gel~i~~~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ 421 (508)
T TIGR02262 354 GEPGELLISGPSSATMYWNNRAKTRDTF-QGEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFE 421 (508)
T ss_pred CCeeEEEEecCccccccCCCHHHhHhhh-hcCceeccceEEEcCCccEEEeccccceeeeCCEEECHHH
Confidence 9999999999999999999999988877 6899999999999999999999999999999999999863
No 65
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-34 Score=250.40 Aligned_cols=220 Identities=31% Similarity=0.501 Sum_probs=194.4
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceE
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 91 (235)
.+.+++.+|++|.+++....+.++..|++.++.+ ..++..+++.++++++|.+.++|+++..+.+........++++|.
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~ 331 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIV 331 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheE
Confidence 3578889999999998777788888888877665 458999999999999999999999999998877666667889999
Q ss_pred EEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceE
Q 026632 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (235)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Ge 171 (235)
++.||+++++.+.+.+.+.++ +++++.||+||++.++...... .......+|.|++++.++++|+ ++++++.|+.||
T Consensus 332 ~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d~-~~~~~~~g~~Ge 408 (557)
T PRK07059 332 ANGGGMAVQRPVAERWLEMTG-CPITEGYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVSIRDD-DGNDLPLGEPGE 408 (557)
T ss_pred EEeccccCCHHHHHHHHHHhC-CCeeeccccccccchhhcCCCC-CCCcCCcccCccCCcEEEEECC-CCCCCCCCCceE
Confidence 999999999999999999886 9999999999999876644322 2334568999999999999995 789999999999
Q ss_pred EEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 172 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 172 l~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+++++.++.||+++++.+...+..+|||+|||+++++++|.+++.||++|+|+++|++|+|++
T Consensus 409 l~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~ 472 (557)
T PRK07059 409 ICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNE 472 (557)
T ss_pred EEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHH
Confidence 9999999999999999999888878999999999999999999999999999999999999863
No 66
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-34 Score=248.09 Aligned_cols=223 Identities=24% Similarity=0.359 Sum_probs=190.4
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFD 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~ 85 (235)
+....+|+++.++|++|.+++... ...+..|+++++.+.+++..+++.++++++|++.++|+++..+.+.... ....
T Consensus 190 ~~~~~~~~~~~~~p~~h~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 268 (501)
T PRK13390 190 YDISESDIYYSSAPIYHAAPLRWC-SMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYD 268 (501)
T ss_pred hCCCCCCeEEecccchhhhHHHHH-HHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCC
Confidence 445667999999999999988433 4456789999999889999999999999999999999999988875432 2345
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
++++|.++.+|+++++++.+.+.+.++ ..+++.||+||+++++...... .....+.+|+|.++ .++++| +++++++
T Consensus 269 ~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g-~~~i~d-~~~~~~~ 344 (501)
T PRK13390 269 VSSLRAVIHAAAPCPVDVKHAMIDWLG-PIVYEYYSSTEAHGMTFIDSPD-WLAHPGSVGRSVLG-DLHICD-DDGNELP 344 (501)
T ss_pred hhhhheEEEcCCCCCHHHHHHHHHhcC-CceeeeecccccCceEEecchh-hccCCCCcCCcccc-eEEEEC-CCCCCCC
Confidence 779999999999999999999999886 8899999999998765433211 12345678999999 789998 4889999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccC--CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDK--KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~--~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+|+.|||+++++.++.+|+++++.+.+.+.. ++|++|||+++++++|++++.||.||+|+++|++|+|++
T Consensus 345 ~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~e 416 (501)
T PRK13390 345 AGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQE 416 (501)
T ss_pred CCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHH
Confidence 9999999999999999999999998887643 679999999999999999999999999999999999864
No 67
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=3.8e-34 Score=249.02 Aligned_cols=220 Identities=38% Similarity=0.622 Sum_probs=194.1
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEE
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLV 92 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i 92 (235)
.+++++..|++|.+++...++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+++........++++|.+
T Consensus 238 ~~~~l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i 317 (541)
T TIGR03205 238 VERVICVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATI 317 (541)
T ss_pred CceEEEeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceE
Confidence 47999999999999998888999999999999888899999999999999999999999999987654444567899999
Q ss_pred EecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEe-CCCCccCCCCCceE
Q 026632 93 GSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVS-VDTQKPLPPNQLGE 171 (235)
Q Consensus 93 ~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d-~~~~~~v~~g~~Ge 171 (235)
+.||+++++++.+++.+.++ .++++.||+||++.++....... ....+.+|.|++++.+++.+ .+.+++++.|+.||
T Consensus 318 ~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Ge 395 (541)
T TIGR03205 318 GSGGAPLPVEVANFFERKTG-LKLKSGWGMTETCSPGTGHPPEG-PDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGE 395 (541)
T ss_pred EEccccCCHHHHHHHHHHhC-CCeecccccccCCcccccCCCCC-CCCCCCcceeccCceeEEEecCCCCccCCCCCeeE
Confidence 99999999999999998886 89999999999998766543221 23456789999999988765 35678999999999
Q ss_pred EEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 172 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 172 l~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+++++.++.||+++++.+.+.+ .++||+|||+++++++|++++.||.||+|+.+|++|+|++
T Consensus 396 l~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~e 458 (541)
T TIGR03205 396 LRIRGPNVTRGYWNRPEESAEAF-VGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQM 458 (541)
T ss_pred EEEecCCccccccCChhhhHhhh-ccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHH
Confidence 99999999999999999988887 6889999999999999999999999999999999999864
No 68
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.2e-34 Score=256.85 Aligned_cols=218 Identities=25% Similarity=0.444 Sum_probs=183.5
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++.+|++|.+|+...++.++..|+++++.+. ++...+++.+.++++|.++++|+++..+.+.. ...++
T Consensus 401 ~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~ 478 (718)
T PRK08043 401 ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDF 478 (718)
T ss_pred hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--Ccccc
Confidence 3456779999999999999997788999999999998874 57788899999999999999999988876642 23457
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.||+++++++.+.+++.|+ +++++.||+||+++++...... ....+++|+|+|+++++++|. ++ .
T Consensus 479 ~~lr~i~~gg~~l~~~~~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~-~~----~ 550 (718)
T PRK08043 479 ARLRYVVAGAEKLQESTKQLWQDKFG-LRILEGYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSV-PG----I 550 (718)
T ss_pred cceEEEEEeCccCCHHHHHHHHHHcC-CCeecccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecC-CC----C
Confidence 89999999999999999999999886 8999999999998766543322 335678999999999999985 33 2
Q ss_pred CCceEEEEEcCcccccccCC--ccc-------ccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNN--EQA-------TKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~--~~~-------~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|||+++|++++.||+++ ++. +.+.+..+|||+|||+|++|++|++++.||+||+|+++|++|+|.|
T Consensus 551 ~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~e 628 (718)
T PRK08043 551 EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEM 628 (718)
T ss_pred CCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHH
Confidence 56699999999999999983 432 2222235799999999999999999999999999999999999864
No 69
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=5.1e-34 Score=248.24 Aligned_cols=219 Identities=27% Similarity=0.404 Sum_probs=193.8
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...+++++++++|++|..++ ..++.++..|+++++.+++++..+++.|+++++|++.++|+++..+.+.........+
T Consensus 216 ~~~~~~~~~l~~~pl~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~ 294 (542)
T PRK06155 216 LEIGADDVLYTTLPLFHTNAL-NAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAH 294 (542)
T ss_pred cCCCCCCEEEEecCHHHHHHH-HHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccC
Confidence 345677999999999999999 5679999999999999999999999999999999999999999999887766666677
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.++.+| +++++.+.+.+.++ +++++.||+||++.++..... ....+.+|.|.++++++++|+ ++++++.|
T Consensus 295 ~l~~~~~g~--~~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d~-~~~~~~~g 367 (542)
T PRK06155 295 RVRVALGPG--VPAALHAAFRERFG-VDLLDGYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVDE-HDQELPDG 367 (542)
T ss_pred ceEEEEEcC--CCHHHHHHHHHHcC-CCEEeeecccccCccccCCCC---CCCCCCcCccCCCceEEEECC-CCCCCCCC
Confidence 899887665 57899999999886 899999999999987664321 345577899999999999995 68999999
Q ss_pred CceEEEEEcC---cccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGP---NMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~---~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||+++++ .++.||+++++.+...+ .++||+|||+++++++|++++.||.+|+|+.+|++|+|++
T Consensus 368 ~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~-~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~e 437 (542)
T PRK06155 368 EPGELLLRADEPFAFATGYFGMPEKTVEAW-RNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFE 437 (542)
T ss_pred CceEEEEecCCccccchhhcCCHHHHHHhh-cCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHH
Confidence 9999999998 68999999999888887 7899999999999999999999999999999999999864
No 70
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=4.2e-34 Score=247.12 Aligned_cols=223 Identities=26% Similarity=0.366 Sum_probs=194.1
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
...++|++++.+|++|.+|+ ..++.++..|+++++.++++++.+++.++++++|++.++|+++..+.+.... ...+++
T Consensus 198 ~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~~~ 275 (515)
T TIGR03098 198 ENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWP-ESAAPS 275 (515)
T ss_pred CCCcccEEEEECchhhHhHH-HHHHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccC-CCCccc
Confidence 44567999999999999998 5789999999999999989999999999999999999999999998875332 235789
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++++|+++++++.+.+++.+++..+++.||+||++......+. ......+.+|+|+++++++++++ ++++++.|+
T Consensus 276 l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~~~i~~~-~~~~~~~~~ 353 (515)
T TIGR03098 276 LRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPE-EVDRRPDSIGKAIPNAEVLVLRE-DGSECAPGE 353 (515)
T ss_pred eEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccc-cccCCCCCcceecCCCEEEEECC-CCCCCCCCC
Confidence 9999999999999999999999977899999999999865544322 12345678999999999999995 788999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccC-----------CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDK-----------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~-----------~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++++.++.+|+++++.+...+.. ++|++|||+++++++|++++.||.||+|+.+|++|+|++
T Consensus 354 ~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~e 431 (515)
T TIGR03098 354 EGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTE 431 (515)
T ss_pred ceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHH
Confidence 9999999999999999998877655422 348999999999999999999999999999999999864
No 71
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.1e-34 Score=248.59 Aligned_cols=225 Identities=31% Similarity=0.472 Sum_probs=193.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
...++|++++++|++|.+|+...++.++..|+++++.+++++..+++.++++++|.+.++|+.+..+.+........+++
T Consensus 247 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 247 VGGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSS 326 (567)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcch
Confidence 34667999999999999999778899999999999999999999999999999999999999999888766555556778
Q ss_pred ceEEEec--ccCCcHHHHHHHHHhCCCCcee-ccccccccccccccccCCC-C----CCCCCcccccCCCcEEEEEeCCC
Q 026632 89 LKLVGSG--AAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFA-G----SRNIGSAGALAPGVEALIVSVDT 160 (235)
Q Consensus 89 lr~i~~~--G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~g~~~~~~~~~~-~----~~~~~~~g~p~~~~~~~~~d~~~ 160 (235)
+|.+..+ ++++++++.+.+++.++ ..++ +.||+||++.......... . ......+|.|+++++++++|+++
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~ 405 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFET 405 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCC
Confidence 8886544 58999999999999987 5555 5799999987654332111 0 12335689999999999999878
Q ss_pred CccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 161 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 161 ~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+++++.|+.|||++++++++.||+++++.+.+.+ .+|||+|||+++++++|++++.||++|+|+.+|++|+|++
T Consensus 406 ~~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~-~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~e 479 (567)
T PRK06178 406 GELLPLGAEGEIVVRTPSLLKGYWNKPEATAEAL-RDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSE 479 (567)
T ss_pred CCcCCCCCceEEEEECCcccccccCChhhhhhcc-cCCceeecceEEEecCCeEEEEecccccEEECCEEECHHH
Confidence 9999999999999999999999999999888877 6899999999999999999999999999999999999864
No 72
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-34 Score=248.28 Aligned_cols=221 Identities=31% Similarity=0.534 Sum_probs=190.6
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
..+.|+++.++|++|.+++. .++ .+..|++.++.+ +++++.+++.++++++|.+.++|+++..+.+........++
T Consensus 203 ~~~~d~~l~~~p~~~~~~~~-~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 280 (528)
T PRK07470 203 TTEQDASLVVAPLSHGAGIH-QLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHS 280 (528)
T ss_pred CCcccEEEEeccchhHHHHH-HHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCc
Confidence 34569999999999999984 444 566777776654 57899999999999999999999999999988766666788
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCC------CCCCCCCcccccCCCcEEEEEeCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF------AGSRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~------~~~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
++|.++.+|++++++..+++.+.++ ..+++.||+||+++.+...+.. ......+.+|.|.+++.++++|+ ++
T Consensus 281 ~lr~~~~gG~~l~~~~~~~~~~~~g-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~-~~ 358 (528)
T PRK07470 281 SLRYVIYAGAPMYRADQKRALAKLG-KVLVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDD-EG 358 (528)
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHhC-cHHHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECC-CC
Confidence 9999999999999999999999886 8899999999998765543211 01234567899999999999995 78
Q ss_pred ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++.|+.|||+++++.++.||+++++.+...+ .++||+|||+++++++|++++.||.||+|+.+|++|+|.+
T Consensus 359 ~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~-~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~ 431 (528)
T PRK07470 359 RELPPGETGEICVIGPAVFAGYYNNPEANAKAF-RDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPRE 431 (528)
T ss_pred CCCCCCCceEEEEeCCccchhhcCCHHHHHhhh-cCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHH
Confidence 999999999999999999999999999888877 7899999999999999999999999999999999999863
No 73
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.9e-34 Score=274.05 Aligned_cols=225 Identities=17% Similarity=0.161 Sum_probs=192.1
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|++++++|++|..++ ..++.+|+.|+++++.+. .++..+++.++++++|++.++|+++..+.... .
T Consensus 450 ~~~~~~~d~~~~~~~~~~d~~~-~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~ 525 (1389)
T TIGR03443 450 RFGLSENDKFTMLSGIAHDPIQ-RDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---T 525 (1389)
T ss_pred hcCCCCCCEEEEecCceecchH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---c
Confidence 3445677999999999999888 688999999999999864 36889999999999999999999999887543 2
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---------CCCCCcccccCCCcEEE
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---------SRNIGSAGALAPGVEAL 154 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~~~~~ 154 (235)
..++++|.++.||++++++..+.+.+.+++++++|.||+||++.++........ .......|+|++++++.
T Consensus 526 ~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 605 (1389)
T TIGR03443 526 TPIPSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLL 605 (1389)
T ss_pred ccCCCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEE
Confidence 357899999999999999999999988878999999999999876554321110 01234689999999999
Q ss_pred EEeCC-CCccCCCCCceEEEEEcCcccccccCCccccccccc----------------------------CCCeEecCce
Q 026632 155 IVSVD-TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID----------------------------KKGWVHTGDL 205 (235)
Q Consensus 155 ~~d~~-~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~----------------------------~~g~~~TgDl 205 (235)
++|++ .+++++.|+.|||+|+||.++.||+++|+.+.+.|. .++||+|||+
T Consensus 606 ivd~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDl 685 (1389)
T TIGR03443 606 VVNRNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDL 685 (1389)
T ss_pred EECCccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCc
Confidence 99964 358899999999999999999999999999887762 2579999999
Q ss_pred EEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 206 GYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 206 ~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+++++|.+++.||+||+||++|++|+|.|
T Consensus 686 g~~~~dG~l~~~GR~dd~Iki~G~rI~p~e 715 (1389)
T TIGR03443 686 GRYLPDGNVECCGRADDQVKIRGFRIELGE 715 (1389)
T ss_pred eeEcCCCCEEEecccCCEEEeCcEEecHHH
Confidence 999999999999999999999999999864
No 74
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.6e-34 Score=254.79 Aligned_cols=221 Identities=33% Similarity=0.426 Sum_probs=180.9
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--------
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-------- 81 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-------- 81 (235)
..++|++++++|++|.++... .+.++..|+++++.+. ++..+++.+++.++|++.++|.+++.+.+....
T Consensus 263 ~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~ 340 (660)
T PLN02430 263 MTHDDVYLSFLPLAHILDRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPR 340 (660)
T ss_pred CCCCCEEEEeCcHHHHHHHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHH
Confidence 346799999999999999854 5667889999988754 788999999999999999999998877642100
Q ss_pred -----------------------CCC--------------CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccc
Q 026632 82 -----------------------KKF--------------DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTE 124 (235)
Q Consensus 82 -----------------------~~~--------------~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 124 (235)
... ..+++|.+++||+++++++.+.++ .+++..+++.||+||
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE 419 (660)
T PLN02430 341 RRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTE 419 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhh
Confidence 000 015899999999999999876655 455478999999999
Q ss_pred cccccccccCCCCCCCCCcccccCCCcEEEEEeC-CCC-ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEec
Q 026632 125 TSGIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQ-KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHT 202 (235)
Q Consensus 125 ~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~-~~~-~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~T 202 (235)
++++.+...... ....+++|.|.+++++++.|. +.+ .+++.+..|||+++||.++.||+++|+.+++.+ .+|||+|
T Consensus 420 ~~~~~~~~~~~~-~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~-~dGw~~T 497 (660)
T PLN02430 420 TLGPTTLGFPDE-MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVM-KDGWFHT 497 (660)
T ss_pred hhhceEeecccc-CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhh-hccceec
Confidence 987665443221 234678999999999999873 333 556667789999999999999999999999988 7999999
Q ss_pred CceEEEcCCCcEEEEeccCCceEe-ccEEeecCC
Q 026632 203 GDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSNW 235 (235)
Q Consensus 203 gDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~~ 235 (235)
||+|+++++|++++.||+||+|++ +|++|+|++
T Consensus 498 GDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~ 531 (660)
T PLN02430 498 GDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEY 531 (660)
T ss_pred cceEEECCCCcEEEEEcccccEEcCCCcEEchHH
Confidence 999999999999999999999997 699999964
No 75
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=7.8e-34 Score=245.34 Aligned_cols=224 Identities=27% Similarity=0.418 Sum_probs=192.7
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKF 84 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~ 84 (235)
.+...+++++++..|++|..+. ...+.++..|+++++.+.++++.+++.++++++|++.++|+++..+++.... ...
T Consensus 190 ~~~~~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 268 (509)
T PRK12406 190 IYGLKPGIRALLTGPLYHSAPN-AYGLRAGRLGGVLVLQPRFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKY 268 (509)
T ss_pred hcCCCCCceEEEEeCCcccchH-HHHHHHHhhheEEEEccCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccC
Confidence 3445667999999999999887 4455678889999998888999999999999999999999999998875432 234
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v 164 (235)
+++++|.++.||+++++++.+++.+.++ +.+++.||+||++.++...... .....+.+|.|++++.++++|+ +++++
T Consensus 269 ~~~~l~~v~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~-~~~~~ 345 (509)
T PRK12406 269 DVSSLRHVIHAAAPCPADVKRAMIEWWG-PVIYEYYGSTESGAVTFATSED-ALSHPGTVGKAAPGAELRFVDE-DGRPL 345 (509)
T ss_pred CCCceeEEEEcCCCCCHHHHHHHHHHcC-CcEEeeccccccCceEecCccc-ccccCCCcCccCCCcEEEEECC-CCCCC
Confidence 5789999999999999999999999886 8899999999999866543221 2334567899999999999995 78999
Q ss_pred CCCCceEEEEEcCcccc-cccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQLGEIWLRGPNMMR-GYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~Gel~v~~~~~~~-~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|+.|||+++++.++. +|+++++.+...+ .++||+|||+++++++|++++.||.||+|+++|++|+|.+
T Consensus 346 ~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~-~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~ 416 (509)
T PRK12406 346 PQGEIGEIYSRIAGNPDFTYHNKPEKRAEID-RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAE 416 (509)
T ss_pred CCCCceEEEEECCccccccccCCchhccccc-CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHH
Confidence 99999999999998765 8999888877665 7899999999999999999999999999999999999863
No 76
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.4e-34 Score=250.92 Aligned_cols=220 Identities=28% Similarity=0.377 Sum_probs=175.9
Q ss_pred cCC-CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC--C--CHHHHHHHHHhccceEEeecHHHHHHHHhcCC-cC
Q 026632 9 AGE-LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--F--DLEMFLRAIEKHRVTHIWVVPPLILALAKHGL-VK 82 (235)
Q Consensus 9 ~~~-~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~--~--~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~-~~ 82 (235)
... ++|++++++|++|.+|+ ..++.+++.|+++++.+. + ++..+++.++++++|.+...|.++..+.+... ..
T Consensus 189 ~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~ 267 (525)
T PRK05851 189 GLDAATDVGCSWLPLYHDMGL-AFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVS 267 (525)
T ss_pred CCCCCCCeEEEcCCCccCccH-HHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhcccc
Confidence 344 67999999999999999 577899999999999763 4 67889999999999977554444444433221 22
Q ss_pred CCCCCCceEEEecccCCcHHHHHHHHHh---CC--CCceeccccccccccccccccCCC-------------CCCCCCcc
Q 026632 83 KFDLSSLKLVGSGAAPLGKELMEECAKN---VP--SATVIQGYGLTETSGIATMENSFA-------------GSRNIGSA 144 (235)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~---~~--~~~i~~~yG~tE~g~~~~~~~~~~-------------~~~~~~~~ 144 (235)
...++++|.+++||+++++++.++|.+. ++ +..+++.||+||++.++....... .......+
T Consensus 268 ~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 347 (525)
T PRK05851 268 DVDLGALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVL 347 (525)
T ss_pred CCCHHHhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeee
Confidence 3457899999999999999999999874 33 245999999999986554321110 01223568
Q ss_pred cccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCce
Q 026632 145 GALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELI 224 (235)
Q Consensus 145 g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i 224 (235)
|+|+++++++++|++.+.+++.|+.|||+++|++++.||+++++.+ .++||+|||+++++ +|.+++.||+||+|
T Consensus 348 G~p~~g~~v~i~d~~~~~~~~~g~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i 421 (525)
T PRK05851 348 GNPIPGMEVRISPGDGAAGVAGREIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELI 421 (525)
T ss_pred cCCCCCcEEEEECCCCCccCCCCCeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEE
Confidence 9999999999999766677999999999999999999999987632 57899999999996 79999999999999
Q ss_pred EeccEEeecCC
Q 026632 225 KYKGFQVTSNW 235 (235)
Q Consensus 225 ~~~G~~v~p~~ 235 (235)
|++|++|+|.|
T Consensus 422 ~~~G~~v~p~e 432 (525)
T PRK05851 422 TVAGRNIFPTE 432 (525)
T ss_pred EECCEEeCHHH
Confidence 99999999864
No 77
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.2e-33 Score=244.59 Aligned_cols=222 Identities=27% Similarity=0.389 Sum_probs=193.7
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCc
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSL 89 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~l 89 (235)
..++|++++++|++|..+....++.++..|+++++.+++++..+++.++++++|++.++|++++.+.............+
T Consensus 211 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l 290 (517)
T PRK08008 211 LRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCL 290 (517)
T ss_pred CCCCCeEEEecCcHHHHHHHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccc
Confidence 35669999999999998887888999999999999999999999999999999999999999998887654444445678
Q ss_pred eEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCc
Q 026632 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQL 169 (235)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~ 169 (235)
|.+..+ .+++++..+.+.+.++ +++++.||+||++..+...... ......++|.|+++++++++|+ ++++++.|+.
T Consensus 291 ~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~g~~~~i~d~-~~~~~~~g~~ 366 (517)
T PRK08008 291 REVMFY-LNLSDQEKDAFEERFG-VRLLTSYGMTETIVGIIGDRPG-DKRRWPSIGRPGFCYEAEIRDD-HNRPLPAGEI 366 (517)
T ss_pred eeeEEe-cCCCHHHHHHHHHHhC-CeEEeeccccccccccccCCcc-ccccCCccccCCCCcEEEEECC-CCCCCCCCCc
Confidence 887765 4799999999999886 9999999999998655443322 1334567999999999999994 7899999999
Q ss_pred eEEEEEc---CcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 170 GEIWLRG---PNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 170 Gel~v~~---~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|||++++ +.++.||+++++.+.+.+..+|||+|||+++++++|++++.||.||+|+.+|++|+|.+
T Consensus 367 Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~ 435 (517)
T PRK08008 367 GEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVE 435 (517)
T ss_pred ceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHH
Confidence 9999997 68999999999999999988999999999999999999999999999999999999864
No 78
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=5.4e-34 Score=251.41 Aligned_cols=212 Identities=26% Similarity=0.297 Sum_probs=178.3
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCH---HHHHHHHHhccceEEeecHHHHHHHHhcCCc----CC
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDL---EMFLRAIEKHRVTHIWVVPPLILALAKHGLV----KK 83 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~---~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~----~~ 83 (235)
+++++++++|++|.+|+...++.+++.|+++++.++ +++ ..+++.++++++|+++++|+++..|++.... ..
T Consensus 251 ~~~~~l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~ 330 (614)
T PRK08180 251 EPPVLVDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRR 330 (614)
T ss_pred CCcEEEEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhh
Confidence 458999999999999987888899999999999763 443 5678889999999999999999988764322 22
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHh----CC-CCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeC
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKN----VP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~----~~-~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~ 158 (235)
..++++|.+++||+++++++.+.+.+. ++ ++.+++.||+||+++++...... ....+++|+|+++++++++|+
T Consensus 331 ~~~~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~ 408 (614)
T PRK08180 331 RFFSRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVPV 408 (614)
T ss_pred hhccceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc--cCCCCcccCccCCcEEEEecC
Confidence 356899999999999999999999875 33 36799999999998766543322 345678999999999999874
Q ss_pred CCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEE----cCCCcEEEEeccCCceEe-ccEEeec
Q 026632 159 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF----DGDGQLYVVDRIKELIKY-KGFQVTS 233 (235)
Q Consensus 159 ~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~----~~~g~~~~~GR~~d~i~~-~G~~v~p 233 (235)
|..|||+++||+++.||+++|+.+.+.|+.+|||+|||+|++ |++|++++.||+||+|++ +|++|++
T Consensus 409 --------~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~ 480 (614)
T PRK08180 409 --------GGKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSV 480 (614)
T ss_pred --------CCCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecc
Confidence 446999999999999999999999998877999999999999 467899999999998885 7998874
No 79
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.9e-34 Score=289.87 Aligned_cols=225 Identities=20% Similarity=0.297 Sum_probs=197.2
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC--CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~--~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
.+...++|++++++|++|..+. ..++.+|..|+++++.+. +++..+++.++++++|++.++|+++..+.+... ..
T Consensus 3272 ~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~ 3348 (3956)
T PRK12467 3272 AYELDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GA 3348 (3956)
T ss_pred hcCCCcCCEEEEecCccHhHHH-HHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--cc
Confidence 4556678999999999999887 788999999999999875 689999999999999999999999999987532 33
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---CCCCCcccccCCCcEEEEEeCCCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---SRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
.++++|.++.|||++++++.+.+.+.+++.+++|.||+||++..++....... .....++|+|++++++.++| +.+
T Consensus 3349 ~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~ 3427 (3956)
T PRK12467 3349 DCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQL 3427 (3956)
T ss_pred CCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCC
Confidence 57889999999999999999999998887899999999999876654322111 12235789999999999999 479
Q ss_pred ccCCCCCceEEEEEcCcccccccCCcccccccccCC-------CeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK-------GWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~-------g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
++++.|+.|||+|+|+.+++||+++|+.|++.|..+ +||+|||+|+++++|.+++.||+||+||++|++|.|.
T Consensus 3428 ~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~ 3507 (3956)
T PRK12467 3428 NPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELG 3507 (3956)
T ss_pred CCCCCCCCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHH
Confidence 999999999999999999999999999999988544 3699999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 3508 E 3508 (3956)
T PRK12467 3508 E 3508 (3956)
T ss_pred H
Confidence 4
No 80
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.6e-33 Score=242.88 Aligned_cols=225 Identities=20% Similarity=0.244 Sum_probs=191.7
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
+....+|+++++.|++|..++ ..++.++..|+++++.++ .++..+++.+++++++.+.++|+++..+.........
T Consensus 177 ~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~ 255 (502)
T TIGR01734 177 FPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQE 255 (502)
T ss_pred CCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccc
Confidence 345667999999999999988 678899999999999875 4789999999999999999999998877765544555
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCC---CCCCCCCcccccCCCcEEEEEeCCCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF---AGSRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
.++++|.++.+|+++++++.+.+.+.+++.++++.||+||++.+....... ........+|.|.++++++++++ ++
T Consensus 256 ~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~-~~ 334 (502)
T TIGR01734 256 NYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDE-EG 334 (502)
T ss_pred cCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECC-CC
Confidence 678999999999999999999999999879999999999998644432211 11223346899999999999995 68
Q ss_pred ccCCCCCceEEEEEcCcccccccCCcccccccc---cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~---~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++.|+.|||+++++.++.||+++++.+.+.+ ...+||+|||+|+++++ ++++.||.+|+|+++|++|+|++
T Consensus 335 ~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~ 410 (502)
T TIGR01734 335 EPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELED 410 (502)
T ss_pred CCCCCCCeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHH
Confidence 999999999999999999999999998887765 23469999999999876 99999999999999999999864
No 81
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.2e-34 Score=291.25 Aligned_cols=225 Identities=20% Similarity=0.267 Sum_probs=196.2
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc---CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~---~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|++++.+|++|..++ ..++.+|..|+++++.+ .+++..+++.++++++|++.++|++++.|.+... .
T Consensus 690 ~~~~~~~d~~l~~~p~~fd~~~-~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~ 766 (5163)
T PRK12316 690 AYGLGVGDTVLQKTPFSFDVSV-WEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--V 766 (5163)
T ss_pred hcCCCCCCEEEeeCCeehHHHH-HHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--c
Confidence 3445677999999999999998 68899999999999985 3689999999999999999999999999987543 2
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
..++++|.+++|||++++++.+.+.+.+++.+++|.||+||++..+..............+|+|+++++++++|+ ++++
T Consensus 767 ~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~-~~~~ 845 (5163)
T PRK12316 767 ASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDA-NLEP 845 (5163)
T ss_pred ccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECC-CCCC
Confidence 357899999999999999999999888888999999999999865443222222334457899999999999995 7899
Q ss_pred CCCCCceEEEEEcCcccccccCCccccccccc------CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTID------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~------~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|+.|||+|+|+.++.||+++|+.+++.|. .++||+|||+|+++++|.+++.||+||+||++|++|+|.|
T Consensus 846 ~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~E 923 (5163)
T PRK12316 846 VPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGE 923 (5163)
T ss_pred CCCCCceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHH
Confidence 99999999999999999999999999988773 2459999999999999999999999999999999999865
No 82
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3e-33 Score=241.84 Aligned_cols=220 Identities=29% Similarity=0.422 Sum_probs=190.1
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCCCCC
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFDLS 87 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~l~ 87 (235)
..+++++++.+|++|.+++ ...+.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.... ...+++
T Consensus 197 ~~~~~~~l~~~p~~h~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~ 275 (511)
T PRK13391 197 FRSDMVYLSPAPLYHSAPQ-RAVMLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLS 275 (511)
T ss_pred CCCCCeEEEcCCHHHHHHH-HHHHHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCcc
Confidence 3566899999999999988 5667888999999999889999999999999999999999999888765432 233578
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.++.||+++++++.+.+++.++ ..+++.||+||++.+....... .....+.+|+|.++ .++++| +++++++.|
T Consensus 276 ~l~~~~~gg~~~~~~~~~~~~~~~g-~~v~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g 351 (511)
T PRK13391 276 SLEVAIHAAAPCPPQVKEQMIDWWG-PIIHEYYAATEGLGFTACDSEE-WLAHPGTVGRAMFG-DLHILD-DDGAELPPG 351 (511)
T ss_pred ceeEEEEccCCCCHHHHHHHHHHcC-CceeeeeccccccceEEecCcc-ccccCCCcCCcccc-eEEEEC-CCCCCCCCC
Confidence 9999999999999999999999886 8899999999999765543221 13345688999999 688888 478999999
Q ss_pred CceEEEEEcCcccccccCCcccccccccCC-CeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKK-GWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~-g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||+++++ ++.+|+++++.+...+..+ +||+|||+++++++|++++.||.||+++.+|++|+|++
T Consensus 352 ~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~e 419 (511)
T PRK13391 352 EPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQE 419 (511)
T ss_pred CceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHH
Confidence 9999999999 8889999999888877554 99999999999999999999999999999999999864
No 83
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.2e-33 Score=267.39 Aligned_cols=226 Identities=19% Similarity=0.198 Sum_probs=194.5
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|++++..|++|..++ ..++.+|..|+++++.++ .++..+++.++++++|++.++|+++..+++......
T Consensus 633 ~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~ 711 (1296)
T PRK10252 633 HYPLTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEG 711 (1296)
T ss_pred hcCCCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccc
Confidence 4556677999999999999998 678899999999999763 589999999999999999999999998887643322
Q ss_pred --CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC-----CCCCCcccccCCCcEEEEE
Q 026632 84 --FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG-----SRNIGSAGALAPGVEALIV 156 (235)
Q Consensus 84 --~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~-----~~~~~~~g~p~~~~~~~~~ 156 (235)
..++++|.++.||+++++++.+.+.+.++ ++++|.||+||++.++........ .......|+|+++..+.++
T Consensus 712 ~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~-~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~ 790 (1296)
T PRK10252 712 ARQSCASLRQVFCSGEALPADLCREWQQLTG-APLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRIL 790 (1296)
T ss_pred ccccCCCccEEEEecCCCCHHHHHHHHhcCC-CEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEE
Confidence 24678999999999999999999998875 899999999999876654332211 1223568999999999999
Q ss_pred eCCCCccCCCCCceEEEEEcCcccccccCCcccccccccC------CCeEecCceEEEcCCCcEEEEeccCCceEeccEE
Q 026632 157 SVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQ 230 (235)
Q Consensus 157 d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~------~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~ 230 (235)
| +.+++++.|+.|||+|+|+.++.||+++++.+.+.|.. ++||+|||+++++++|.+++.||+||+||++|++
T Consensus 791 d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~r 869 (1296)
T PRK10252 791 D-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQR 869 (1296)
T ss_pred C-CCCCCCCCCCceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEE
Confidence 9 58999999999999999999999999999999888743 3499999999999999999999999999999999
Q ss_pred eecCC
Q 026632 231 VTSNW 235 (235)
Q Consensus 231 v~p~~ 235 (235)
|+|.|
T Consensus 870 i~~~e 874 (1296)
T PRK10252 870 IELGE 874 (1296)
T ss_pred ecHHH
Confidence 99864
No 84
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-33 Score=242.13 Aligned_cols=220 Identities=29% Similarity=0.438 Sum_probs=193.2
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--CCCCCCC
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV--KKFDLSS 88 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~--~~~~l~~ 88 (235)
..++++++..|++|.+++ ...+.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.... ...++++
T Consensus 185 ~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 263 (502)
T PRK08276 185 GPDSVYLSPAPLYHTAPL-RFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSS 263 (502)
T ss_pred CCCCEEEEcCcHHHHHHH-HHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCccc
Confidence 356899999999999998 4556789999999999889999999999999999999999999999876543 2345789
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.++.+|++++.++.+++.+.++ ..+++.||+||++.++...... .....+.+|+|+ +..++++|+ ++++++.|+
T Consensus 264 lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~~yG~tE~~~~~~~~~~~-~~~~~~~~G~~~-~~~~~i~d~-~~~~~~~g~ 339 (502)
T PRK08276 264 LRVAIHAAAPCPVEVKRAMIDWWG-PIIHEYYASSEGGGVTVITSED-WLAHPGSVGKAV-LGEVRILDE-DGNELPPGE 339 (502)
T ss_pred ceEEEecCCCCCHHHHHHHHHHhC-cHhhhhcccccccceeEecCcc-ccccCCCcceec-ccEEEEECC-CCCCCcCCC
Confidence 999999999999999999999886 7899999999999865543322 133446789999 889999995 789999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++++.++.+|+++++.+...+..++||+|||+++++++|.+++.||.||+++.+|++|+|++
T Consensus 340 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~ 406 (502)
T PRK08276 340 IGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQE 406 (502)
T ss_pred ceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHH
Confidence 9999999999999999999999988877799999999999999999999999999999999999863
No 85
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.3e-34 Score=252.71 Aligned_cols=224 Identities=26% Similarity=0.415 Sum_probs=178.4
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CC--CHHHHHHHHH--hccceEEeecHHHHHHHHhcCC----
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KF--DLEMFLRAIE--KHRVTHIWVVPPLILALAKHGL---- 80 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~--~~~~~~~~l~--~~~~t~~~~~p~~~~~l~~~~~---- 80 (235)
..+++++++++|++|..|+...++.++..|.++++.+ .+ ++..+++.++ +++++.+..+|+++..+.....
T Consensus 232 ~~~~~~~l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~ 311 (612)
T PRK12476 232 LDRNTHGVSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAE 311 (612)
T ss_pred CCCCceEEEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhh
Confidence 3566899999999999999655555555555555543 23 8899999994 5889999999998887766421
Q ss_pred cCCCCCCCceEEEecccCCcHHHHHHHHHhCC-----CCceeccccccccccccccccCCCC------------------
Q 026632 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAG------------------ 137 (235)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~i~~~yG~tE~g~~~~~~~~~~~------------------ 137 (235)
.....++++| ++.||+++++++.+.+.+.|+ ..++++.||+||++..+........
T Consensus 312 ~~~~~l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 390 (612)
T PRK12476 312 GDDIDLSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVR 390 (612)
T ss_pred hcCcchhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeee
Confidence 1234678999 999999999999999999873 2458999999999765433211100
Q ss_pred -------CCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCccccccccc---------------
Q 026632 138 -------SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID--------------- 195 (235)
Q Consensus 138 -------~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~--------------- 195 (235)
.....++|+|+++.+++++|++++++++.|+.|||+++|+.++.||+++++.+.+.|.
T Consensus 391 ~~~~~~~~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~ 470 (612)
T PRK12476 391 VAADAPNAVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADG 470 (612)
T ss_pred cCCCCCCcceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhcccccccccccc
Confidence 0012468999999999999976699999999999999999999999999999888773
Q ss_pred ---CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 196 ---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 196 ---~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.++||+|||+|++ ++|++++.||+||+||++|++|+|+|
T Consensus 471 ~~~~~~w~~TGDlg~~-~dG~l~i~GR~~d~I~~~G~~I~p~e 512 (612)
T PRK12476 471 AADDGTWLRTGDLGVY-LDGELYITGRIADLIVIDGRNHYPQD 512 (612)
T ss_pred ccCCCCeeecccccee-ECCEEEEEeccCcEEEECCcccCHHH
Confidence 1359999999998 59999999999999999999999864
No 86
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.3e-33 Score=243.06 Aligned_cols=222 Identities=25% Similarity=0.372 Sum_probs=187.6
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
.+...++|+++++.|++|.+++ ..++.++..|+++++.+ .+++..+++.++++++|.+.++|+++..+.+..+.....
T Consensus 213 ~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 291 (539)
T PRK07008 213 AMGLSARDAVLPVVPMFHVNAW-GLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLR 291 (539)
T ss_pred ccCCCCCceEEecCchHHhhhH-HHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCC
Confidence 3444567999999999999888 55677888999999874 579999999999999999999999999999877666667
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC------C---CCCCCcccccCCCcEEEEE
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA------G---SRNIGSAGALAPGVEALIV 156 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~------~---~~~~~~~g~p~~~~~~~~~ 156 (235)
++++|.++.+|+++++++.+.+.+.++ +.+++.||+||++..+....... . ......+|+|+|++.++++
T Consensus 292 ~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~ 370 (539)
T PRK07008 292 FSTLRRTVIGGSACPPAMIRTFEDEYG-VEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIV 370 (539)
T ss_pred cccceEEEEcCCCCCHHHHHHHHHHhC-CceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEE
Confidence 889999999999999999999999886 89999999999997654332110 0 0113568999999999999
Q ss_pred eCCCCccCCCC--CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 157 SVDTQKPLPPN--QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 157 d~~~~~~v~~g--~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
|+ ++++++.+ +.|||+++++.++.+|++++.. .+ .+|||+|||+++++++|++++.||.||+|+++|++|+|.
T Consensus 371 d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~---~~-~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~ 445 (539)
T PRK07008 371 GD-DGRELPWDGKAFGDLQVRGPWVIDRYFRGDAS---PL-VDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSI 445 (539)
T ss_pred CC-CCCccCCCCCcceEEEEeCCccchhhcCChhh---hh-cCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHH
Confidence 95 77777743 5799999999999999998732 33 478999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
+
T Consensus 446 e 446 (539)
T PRK07008 446 D 446 (539)
T ss_pred H
Confidence 3
No 87
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.2e-34 Score=250.38 Aligned_cols=212 Identities=25% Similarity=0.287 Sum_probs=177.2
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCH---HHHHHHHHhccceEEeecHHHHHHHHhcCCcC----CC
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDL---EMFLRAIEKHRVTHIWVVPPLILALAKHGLVK----KF 84 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~---~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~----~~ 84 (235)
.+++++++|++|.+|+...++.++..|+++++.++ +++ ..+++.++++++|++.++|+++..|.+..... ..
T Consensus 264 ~~~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~ 343 (624)
T PRK12582 264 PPVSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRS 343 (624)
T ss_pred CceEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHH
Confidence 58999999999999997778889999999999763 333 45677788999999999999998887643222 12
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhC----C-CCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNV----P-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD 159 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~----~-~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~ 159 (235)
.++++|.+++||+++++++.+++.+.+ + ++.+++.||+||++.++...... ....+++|+|++++++++++
T Consensus 344 ~~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~-- 419 (624)
T PRK12582 344 FFKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLAP-- 419 (624)
T ss_pred HhhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC--CCCCCCCCcCCCCcEEEEcc--
Confidence 467999999999999999999998863 3 36799999999998766532222 34567899999999998864
Q ss_pred CCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEE-c---CCCcEEEEeccCCceEe-ccEEeecC
Q 026632 160 TQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF-D---GDGQLYVVDRIKELIKY-KGFQVTSN 234 (235)
Q Consensus 160 ~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~-~---~~g~~~~~GR~~d~i~~-~G~~v~p~ 234 (235)
.|+.|||+++||.++.||+++|+.+.+.|+.+|||+|||+|++ | ++|++++.||+||+|++ +|++|+|.
T Consensus 420 ------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~ 493 (624)
T PRK12582 420 ------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVG 493 (624)
T ss_pred ------CCCceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechH
Confidence 5788999999999999999999999999878999999999998 4 46899999999999996 79999975
No 88
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.8e-33 Score=244.46 Aligned_cols=220 Identities=31% Similarity=0.514 Sum_probs=191.3
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceE
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 91 (235)
++++++.+|++|.+++....+.++..|++.++. .++++..+++.++++++|++.++|+++..+.+........++++|.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 333 (560)
T PRK08751 254 CEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKM 333 (560)
T ss_pred CceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhhee
Confidence 367889999999999866666677677766654 4568999999999999999999999999999876555567889999
Q ss_pred EEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceE
Q 026632 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (235)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Ge 171 (235)
++.||+++++++.+.+.+.++ +.+++.||+||+++++...... .....+.+|.|++++.++++| +++++++.|+.||
T Consensus 334 v~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Ge 410 (560)
T PRK08751 334 TLGGGMAVQRSVAERWKQVTG-LTLVEAYGLTETSPAACINPLT-LKEYNGSIGLPIPSTDACIKD-DAGTVLAIGEIGE 410 (560)
T ss_pred eeeCCCCCCHHHHHHHHHHhC-CeEEEeeccccCCCceeccccc-ccccCCCcCccCCCceEEEEC-CCCCCCCCCCceE
Confidence 999999999999999999886 8899999999998866544322 123446789999999999999 4889999999999
Q ss_pred EEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 172 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 172 l~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+++++.++.||+++++.+.+.+..+|||+|||+++++++|++++.||.+|+|+++|++|+|.+
T Consensus 411 l~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~e 474 (560)
T PRK08751 411 LCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNE 474 (560)
T ss_pred EEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHH
Confidence 9999999999999999999888877899999999999999999999999999999999999863
No 89
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-33 Score=240.68 Aligned_cols=232 Identities=26% Similarity=0.403 Sum_probs=203.0
Q ss_pred eeeeeccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCC
Q 026632 3 TMDQETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL 80 (235)
Q Consensus 3 ~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~ 80 (235)
+...+++..+.|++.++....|+.|.+...+.+|.+|+++++.+ ++++..+++.+.++++|+++..|+.++.+.+...
T Consensus 271 ~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~ 350 (626)
T KOG1175|consen 271 TSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQ 350 (626)
T ss_pred hcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhcc
Confidence 34567778888999999999999999999999999999999996 4599999999999999999999999997776554
Q ss_pred cC--CCCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeC
Q 026632 81 VK--KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 81 ~~--~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~ 158 (235)
.. ..++++||++.+.||++.++..+++.+.++...|++.||+||+|+.+........+.+++..+.|+++..+.+.|+
T Consensus 351 ~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de 430 (626)
T KOG1175|consen 351 EDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDE 430 (626)
T ss_pred ccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECC
Confidence 43 3345679999999999999999999999974469999999999998876554422578899999999999999996
Q ss_pred CCCccCCCC-CceEEEEEc--C-cccccccCCcccccccccC--CCeEecCceEEEcCCCcEEEEeccCCceEeccEEee
Q 026632 159 DTQKPLPPN-QLGEIWLRG--P-NMMRGYYNNEQATKLTIDK--KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 232 (235)
Q Consensus 159 ~~~~~v~~g-~~Gel~v~~--~-~~~~~y~~~~~~~~~~~~~--~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~ 232 (235)
+|++++.+ +.|+|+++. | .++++|++|++....+... .|+|.|||.+++|++|++++.||.||+||++|+|++
T Consensus 431 -~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRig 509 (626)
T KOG1175|consen 431 -NGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIG 509 (626)
T ss_pred -CCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeec
Confidence 88888876 889999997 4 7799999999966655545 899999999999999999999999999999999999
Q ss_pred cCC
Q 026632 233 SNW 235 (235)
Q Consensus 233 p~~ 235 (235)
++|
T Consensus 510 taE 512 (626)
T KOG1175|consen 510 TAE 512 (626)
T ss_pred HHH
Confidence 865
No 90
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.1e-33 Score=240.42 Aligned_cols=218 Identities=26% Similarity=0.351 Sum_probs=185.3
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...+.|++++.+|++|..++...++.++..|+++++.+++++..+++.++++++|++.++|+.+..++...+......+
T Consensus 188 ~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~ 267 (529)
T PRK07867 188 FGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADN 267 (529)
T ss_pred hCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCccccccc
Confidence 34566799999999999999977788899999999999889999999999999999999999999988876544333345
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|. +.||+.+++.. +++.+.++ +++++.||+||++.++...+ ....+.+|.|.++ +++++++++++++.|
T Consensus 268 ~lr~-~~gg~~~~~~~-~~~~~~~g-~~l~~~YG~TE~~~~~~~~~----~~~~~~~g~~~~~--~~i~~~~~~~~~~~g 338 (529)
T PRK07867 268 PLRI-VYGNEGAPGDI-ARFARRFG-CVVVDGFGSTEGGVAITRTP----DTPPGALGPLPPG--VAIVDPDTGTECPPA 338 (529)
T ss_pred ceEE-EecCCCChHHH-HHHHHHhC-CcEEEeecccccccccccCC----CCCCCCcCCCCCC--EEEEECCCCCCCCCC
Confidence 7774 55888887765 66777785 89999999999986654322 2234578999998 677887788889988
Q ss_pred C------------ceEEEE-EcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 168 Q------------LGEIWL-RGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 168 ~------------~Gel~v-~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+ .|||++ +++.++.||+++++.+...+ .+|||+|||+++++++|++++.||.||+|+++|++|+|.
T Consensus 339 ~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~-~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~ 417 (529)
T PRK07867 339 EDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERM-RGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTA 417 (529)
T ss_pred ccccccccccCCcceEEEEecCCcccccccCChHhhhhhh-cCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHH
Confidence 8 999999 99999999999999988887 689999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 418 e 418 (529)
T PRK07867 418 P 418 (529)
T ss_pred H
Confidence 4
No 91
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1e-32 Score=241.05 Aligned_cols=221 Identities=32% Similarity=0.513 Sum_probs=194.0
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCc
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSL 89 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~l 89 (235)
..++.++..+|++|.+++....+.++..|+++++.. ..++..+++.++++++|.+.++|+++..+.+........++++
T Consensus 248 ~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 327 (560)
T PRK08974 248 PGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSL 327 (560)
T ss_pred CCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccce
Confidence 345788999999999998777788888898877764 4688999999999999999999999999988766556667899
Q ss_pred eEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCc
Q 026632 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQL 169 (235)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~ 169 (235)
|.++.||+++++.+.+.+.+.++ +++++.||+||++.++...... .......+|.|++++.++++++ ++++++.|+.
T Consensus 328 r~~~~gg~~~~~~~~~~~~~~~g-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~-~~~~~~~g~~ 404 (560)
T PRK08974 328 KLSVGGGMAVQQAVAERWVKLTG-QYLLEGYGLTECSPLVSVNPYD-LDYYSGSIGLPVPSTEIKLVDD-DGNEVPPGEP 404 (560)
T ss_pred eEEEecCccCCHHHHHHHHHHhC-CcEEeeecccccCceeeccCCC-CcccCCccccCcCCCEEEEECC-CCCCCCCCCc
Confidence 99999999999999999999875 8999999999999876654332 2334567899999999999995 7899999999
Q ss_pred eEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 170 GEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 170 Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|||+++++.++.+|+++++.+...+ .+|||+|||+++++++|.+++.||++|+|+++|++|+|++
T Consensus 405 Gel~v~g~~~~~gy~~~~~~~~~~~-~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~ 469 (560)
T PRK08974 405 GELWVKGPQVMLGYWQRPEATDEVI-KDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNE 469 (560)
T ss_pred eEEEEecCCcchhhcCChhhhhhhh-hcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHH
Confidence 9999999999999999999888887 7899999999999999999999999999999999999853
No 92
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.7e-33 Score=286.55 Aligned_cols=226 Identities=20% Similarity=0.280 Sum_probs=197.9
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC--CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~--~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
.+...++|++++++|++|..+. ..++.+|..|+++++.+. +++..+++.++++++|++.++|++++.+.+......
T Consensus 4729 ~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~- 4806 (5163)
T PRK12316 4729 RYELTPDDRVLQFMSFSFDGSH-EGLYHPLINGASVVIRDDSLWDPERLYAEIHEHRVTVLVFPPVYLQQLAEHAERDG- 4806 (5163)
T ss_pred hcCCCcCCeEEEecCcchhhHH-HHHHHHHhCCCEEEEcCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhcccc-
Confidence 4556677999999999999998 688999999999999864 389999999999999999999999999987654433
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC---CCCCCCcccccCCCcEEEEEeCCCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
.++++|.++.|||++++++.+.+.+.+++++++|.||+||++.++....... .......+|+|++++.++++| +.+
T Consensus 4807 ~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~ 4885 (5163)
T PRK12316 4807 EPPSLRVYCFGGEAVAQASYDLAWRALKPVYLFNGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLD-GQL 4885 (5163)
T ss_pred CCCCccEEEEecccCCHHHHHHHHHhCCCCEEEecccCccceEEEEEEEcccccccCCCCCcccccccCCEEEEEC-CCC
Confidence 6789999999999999999999888887799999999999998766443221 123445789999999999999 588
Q ss_pred ccCCCCCceEEEEEcCcccccccCCcccccccccC-------CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK-------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~-------~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
++++.|+.|||+|+||.+++||+++|+.+++.|.. .+||+|||+++++++|.+++.||+||+||++|++|.|.
T Consensus 4886 ~~~p~g~~GEl~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~ 4965 (5163)
T PRK12316 4886 NPLPVGVAGELYLGGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRADGVIDYLGRVDHQVKIRGFRIELG 4965 (5163)
T ss_pred CcCCCCCCceEEECCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECCCCcEEEeccccceEeeccEeecHH
Confidence 99999999999999999999999999999888832 35999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 4966 e 4966 (5163)
T PRK12316 4966 E 4966 (5163)
T ss_pred H
Confidence 4
No 93
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.4e-33 Score=282.18 Aligned_cols=226 Identities=23% Similarity=0.295 Sum_probs=195.9
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|+++++.|++|..++ ..++.+|..|+++++.++ .++..+++.++++++|++.++|+++..|.+... ..
T Consensus 1753 ~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~ 1830 (3956)
T PRK12467 1753 AYQLSAADVVLQFTSFAFDVSV-WELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QV 1830 (3956)
T ss_pred hcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-cc
Confidence 4455677999999999999998 678999999999999864 479999999999999999999999999987532 23
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCC---CCCCCCCcccccCCCcEEEEEeCCC
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF---AGSRNIGSAGALAPGVEALIVSVDT 160 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~---~~~~~~~~~g~p~~~~~~~~~d~~~ 160 (235)
..++++|.++.|||++++++.+.+.+.+++.+++|.||+||++..++..... ........+|+|++++.+.++| +.
T Consensus 1831 ~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~ 1909 (3956)
T PRK12467 1831 EHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-AS 1909 (3956)
T ss_pred ccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CC
Confidence 3578999999999999999999999998878899999999998766543221 1122345789999999999999 48
Q ss_pred CccCCCCCceEEEEEcCcccccccCCccccccccc-------CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeec
Q 026632 161 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 161 ~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-------~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
+++++.|+.|||+|+|+.+++||+++|+.+++.|. ..+||+|||+++++++|.++++||+||+||++|++|.|
T Consensus 1910 ~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel 1989 (3956)
T PRK12467 1910 LNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIEL 1989 (3956)
T ss_pred CCCCCCCCceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEech
Confidence 99999999999999999999999999999998873 23599999999999999999999999999999999998
Q ss_pred CC
Q 026632 234 NW 235 (235)
Q Consensus 234 ~~ 235 (235)
.|
T Consensus 1990 ~e 1991 (3956)
T PRK12467 1990 GE 1991 (3956)
T ss_pred HH
Confidence 64
No 94
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.3e-32 Score=237.02 Aligned_cols=225 Identities=22% Similarity=0.280 Sum_probs=192.7
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
+.....+++++..|++|..++ ..++.++..|+++++.++ .++..+++.+++++++.+..+|+++..+.........
T Consensus 179 ~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~ 257 (503)
T PRK04813 179 FALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEE 257 (503)
T ss_pred cCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcc
Confidence 344567999999999999998 677899999999998875 4789999999999999999999998887665555556
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC---CCCCCCcccccCCCcEEEEEeCCCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
.++++|.++++|+++++.+.+++.+.|++..+++.||+||++..+....... .......+|.|.++++++++| +++
T Consensus 258 ~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~ 336 (503)
T PRK04813 258 HLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEG 336 (503)
T ss_pred cCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCC
Confidence 7889999999999999999999999997789999999999986554322211 123344689999999999999 588
Q ss_pred ccCCCCCceEEEEEcCcccccccCCccccccccc---CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID---KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~---~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++.|+.|||+++++.++.||+++++.+...|. ..+||+|||++++ ++|++++.||.||+|+++|++|+|.+
T Consensus 337 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~ 412 (503)
T PRK04813 337 TKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEE 412 (503)
T ss_pred CCCCCCCceEEEEeccccccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHH
Confidence 9999999999999999999999999998887762 2359999999999 89999999999999999999999863
No 95
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=8.7e-33 Score=280.98 Aligned_cols=225 Identities=23% Similarity=0.297 Sum_probs=196.4
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc---CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA---KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~---~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|++++..|++|..++ ..++.+|..|+++++.+ ..++..+++.++++++|++.++|+++..+.+... .
T Consensus 1308 ~~~~~~~d~~l~~~~~~fd~s~-~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~ 1384 (4334)
T PRK05691 1308 TYALDDSDVLMQKAPISFDVSV-WECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--A 1384 (4334)
T ss_pred hcCCCCCCEEEEeCCccHHHHH-HHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--c
Confidence 3455677999999999999998 68899999999999985 3689999999999999999999999999886533 2
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
..++++|.++.|||++++++.+.+.+.+++++++|.||+||++..+........+.....+|+|++++.+.++|+ .+++
T Consensus 1385 ~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~-~~~~ 1463 (4334)
T PRK05691 1385 AACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDA-ELNL 1463 (4334)
T ss_pred ccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECC-CCCC
Confidence 357899999999999999999999999988999999999999876554322222334567899999999999995 7899
Q ss_pred CCCCCceEEEEEcCcccccccCCcccccccccC-------CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK-------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~-------~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|+.|||+|+|+.+++||+++|+.+.+.|.. .+||+|||+++++++|.+++.||+|++||++|++|.|.|
T Consensus 1464 vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~e 1542 (4334)
T PRK05691 1464 LPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEE 1542 (4334)
T ss_pred CCCCCceEEEecCcccchhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHH
Confidence 999999999999999999999999999888732 359999999999999999999999999999999999864
No 96
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-32 Score=242.96 Aligned_cols=224 Identities=17% Similarity=0.164 Sum_probs=184.5
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL-- 80 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~-- 80 (235)
.+...++|++++..++.|+.+. .++.+|..|+++++.+. +++..+++.++++++|++.++|+++..+.+...
T Consensus 299 ~~~~~~~d~~~~~~~~~~~~~~--~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 376 (655)
T PRK03584 299 HCDLGPGDRFFWYTTCGWMMWN--WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVP 376 (655)
T ss_pred hcCCCCCCEEEEcCCchHHhHH--HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCc
Confidence 3455677999999999998654 46789999999999752 489999999999999999999999998876532
Q ss_pred cCCCCCCCceEEEecccCCcHHHHHHHHHhCC-CCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCC
Q 026632 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVD 159 (235)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~ 159 (235)
....+++++|.++++|+++++++.+++.+.++ ++.+.+.||+||++......... .....+++|.|.++++++++|+
T Consensus 377 ~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~~~ivd~- 454 (655)
T PRK03584 377 GETHDLSALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPL-LPVYRGEIQCRGLGMAVEAWDE- 454 (655)
T ss_pred cccCChhheEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCC-CCcCCCccCCCcCCceeEEECC-
Confidence 22346789999999999999999999999884 57899999999986543322211 1334577899999999999995
Q ss_pred CCccCCCCCceEEEEEcC--cccccccCCccccc--ccc--cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeec
Q 026632 160 TQKPLPPNQLGEIWLRGP--NMMRGYYNNEQATK--LTI--DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 160 ~~~~v~~g~~Gel~v~~~--~~~~~y~~~~~~~~--~~~--~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
+|+++ .|+.|||++++| +++.||+++++.+. ..+ ..+|||+|||++++|++|++++.||+||+||++|++|+|
T Consensus 455 ~g~~~-~g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p 533 (655)
T PRK03584 455 DGRPV-VGEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGT 533 (655)
T ss_pred CCCCC-CCCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECH
Confidence 78888 899999999995 78999999887532 121 125799999999999999999999999999999999998
Q ss_pred CC
Q 026632 234 NW 235 (235)
Q Consensus 234 ~~ 235 (235)
.|
T Consensus 534 ~E 535 (655)
T PRK03584 534 AE 535 (655)
T ss_pred HH
Confidence 64
No 97
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.4e-32 Score=239.45 Aligned_cols=219 Identities=28% Similarity=0.437 Sum_probs=177.2
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCce
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLK 90 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr 90 (235)
...++++..+|++|..++ ...+.++..|+++++.+++++..+++.|+++++|++.++|+++..|.+.........++++
T Consensus 225 ~~~~~~l~~~pl~h~~g~-~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 303 (579)
T PLN03102 225 GTCPVYLWTLPMFHCNGW-TFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPV 303 (579)
T ss_pred CCCCeEEecCChhhhcch-hHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccce
Confidence 345789999999999998 5667788889999988888999999999999999999999999999886544333456788
Q ss_pred EEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC-----C-------CCCCCcccccCCCcEEEEEeC
Q 026632 91 LVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-----G-------SRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 91 ~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~-----~-------~~~~~~~g~p~~~~~~~~~d~ 158 (235)
.+++||+++++++.+.+.+ ++ .++++.||+||+++.+....... . ....+..+.+.+ .+.+++.
T Consensus 304 ~~~~gg~~~~~~~~~~~~~-~g-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~ 379 (579)
T PLN03102 304 HVLTGGSPPPAALVKKVQR-LG-FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNK 379 (579)
T ss_pred EEEECCCCCCHHHHHHHHH-cC-CeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEecc
Confidence 8999999999999999876 54 89999999999986443221100 0 011122233333 4556666
Q ss_pred CCCccCCC--CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 159 DTQKPLPP--NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 159 ~~~~~v~~--g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.+++++. ++.|||++++|.++.||+++++.+.+.| .+|||+|||+|++|++|++++.||+||+|+++|++|+|.|
T Consensus 380 ~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f-~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~e 457 (579)
T PLN03102 380 ETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAF-KHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVE 457 (579)
T ss_pred ccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhh-ccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHH
Confidence 67777764 3689999999999999999999999888 6899999999999999999999999999999999999864
No 98
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.8e-32 Score=238.15 Aligned_cols=224 Identities=24% Similarity=0.357 Sum_probs=186.4
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+....+|++++.+|++|.+++ ..++.++..|+++++.+ .+++..+++.++++++++++++|+++..+...........
T Consensus 219 ~~~~~~~~~l~~~pl~h~~g~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 297 (576)
T PRK05620 219 LAVTHGESFLCCVPIYHVLSW-GVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPER 297 (576)
T ss_pred cCCCCCCeEEEeCChHHhhhh-HHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCccc
Confidence 445667999999999999998 56788899999998875 5789999999999999999999999988876543333345
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---C---CCCCcccccCCCcEEEEEeCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---S---RNIGSAGALAPGVEALIVSVDT 160 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---~---~~~~~~g~p~~~~~~~~~d~~~ 160 (235)
.++|.++.+|+++++++.+.+.+.++ +++++.||+||++.++........ . ......|++.++++++++++
T Consensus 298 ~~l~~~~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-- 374 (576)
T PRK05620 298 MSLQEIYVGGSAVPPILIKAWEERYG-VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-- 374 (576)
T ss_pred CceeEEEEcCCCCCHHHHHHHHHHhC-CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC--
Confidence 68999999999999999999999886 899999999999976554322110 0 11236788999999999984
Q ss_pred CccCC--CCCceEEEEEcCcccccccCCcccc----------------cccccCCCeEecCceEEEcCCCcEEEEeccCC
Q 026632 161 QKPLP--PNQLGEIWLRGPNMMRGYYNNEQAT----------------KLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKE 222 (235)
Q Consensus 161 ~~~v~--~g~~Gel~v~~~~~~~~y~~~~~~~----------------~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d 222 (235)
++.++ +++.|||+++++.++.+|+++++.+ ...+..++||+|||+++++++|.+++.||.||
T Consensus 375 g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d 454 (576)
T PRK05620 375 GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARD 454 (576)
T ss_pred CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhh
Confidence 66664 5788999999999999999998877 22344578999999999999999999999999
Q ss_pred ceEeccEEeecCC
Q 026632 223 LIKYKGFQVTSNW 235 (235)
Q Consensus 223 ~i~~~G~~v~p~~ 235 (235)
+|+.+|++|+|++
T Consensus 455 ~i~~~G~~i~~~e 467 (576)
T PRK05620 455 VIRSGGEWIYSAQ 467 (576)
T ss_pred hhhcCCEEEcHHH
Confidence 9999999999864
No 99
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.4e-32 Score=251.13 Aligned_cols=217 Identities=21% Similarity=0.262 Sum_probs=174.9
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++.+|++|.+|+...++.++..|+++++.++++++.+++.|+++++|+++++|+++..+++........++
T Consensus 641 ~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~ 720 (994)
T PRK07868 641 AALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNH 720 (994)
T ss_pred cCCCCCCeEEEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCC
Confidence 34566799999999999999977777788888888888889999999999999999999999999999886544444677
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCc-EEEEE--e-------
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGV-EALIV--S------- 157 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~-~~~~~--d------- 157 (235)
++|.++ |+.+++++++++.+.|+++.+++.||+||++.+.... . ..+.+++|+|++++ ++++. |
T Consensus 721 slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~~~--~--~~~~~svG~p~pg~~~v~i~~~d~~~g~li 794 (994)
T PRK07868 721 PVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLANV--S--GAKIGSKGRPLPGAGRVELAAYDPEHDLIL 794 (994)
T ss_pred ceEEEe--cCCCCHHHHHHHHHHhCchheeeeeeccccccccccc--C--CCCCcccCCccCCCCceeEEEecCcCCcee
Confidence 899877 3349999999999999878999999999987654321 1 23457899999997 56553 1
Q ss_pred -CCCC--ccCCCCCceEEEEEcCcccccccCCcccc--ccccc-CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEe
Q 026632 158 -VDTQ--KPLPPNQLGEIWLRGPNMMRGYYNNEQAT--KLTID-KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQV 231 (235)
Q Consensus 158 -~~~~--~~v~~g~~Gel~v~~~~~~~~y~~~~~~~--~~~~~-~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v 231 (235)
.++| +.++.|+.|||+++++.. + +|+.+ ...|. .+|||+|||+|++|++|++++.||+||+||++|++|
T Consensus 795 ~d~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I 869 (994)
T PRK07868 795 EDDRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPV 869 (994)
T ss_pred ecCCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceE
Confidence 1345 567899999999998753 2 33322 22232 479999999999999999999999999999999999
Q ss_pred ecCC
Q 026632 232 TSNW 235 (235)
Q Consensus 232 ~p~~ 235 (235)
+|+|
T Consensus 870 ~p~E 873 (994)
T PRK07868 870 YTEP 873 (994)
T ss_pred cHHH
Confidence 9864
No 100
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6e-32 Score=252.99 Aligned_cols=218 Identities=25% Similarity=0.420 Sum_probs=185.3
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++.+|++|.+++...++.++..|+++++.+. .+...+.+.++++++|++.++|+++..+.+.. ...++
T Consensus 829 ~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~ 906 (1140)
T PRK06814 829 IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDF 906 (1140)
T ss_pred hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccc
Confidence 4456779999999999999997788999999999998864 56788899999999999999999999887753 33467
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.||+++++++.+.+.+.++ .++++.||+||+++.+...... ....+++|+|.|++++++.+.+ + .
T Consensus 907 ~~lr~v~~gg~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~~-~----~ 978 (1140)
T PRK06814 907 RSLRYVFAGAEKVKEETRQTWMEKFG-IRILEGYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPVP-G----I 978 (1140)
T ss_pred cceeEEEEcCCcCCHHHHHHHHHHhC-CcEEeccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeecC-C----C
Confidence 89999999999999999999999886 8999999999999866543322 3445689999999999998742 2 3
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|||+++++.++.||+++++........+|||+|||++++|++|++++.||.||+||++|++|+|.|
T Consensus 979 ~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~e 1047 (1140)
T PRK06814 979 DEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAA 1047 (1140)
T ss_pred CCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHH
Confidence 678999999999999999876543222236899999999999999999999999999999999999864
No 101
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.9e-32 Score=235.26 Aligned_cols=220 Identities=24% Similarity=0.321 Sum_probs=180.9
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+....+|+++.++|++|.+++...++.++..|+++++.+.+++..+++.++++++|++...|+.+..++..........
T Consensus 185 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~ 264 (540)
T PRK13388 185 RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDAD 264 (540)
T ss_pred HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccc
Confidence 34456679999999999999997667778999999999888899999999999999999999999998887654333233
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEE-----------E
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEAL-----------I 155 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~-----------~ 155 (235)
.++|.+ . |++++++..+.+.+.++ .++++.||+||++.++.... ....+.+|+|++++.+. +
T Consensus 265 ~~l~~~-~-G~~~~~~~~~~~~~~~~-~~l~~~YG~tE~~~~~~~~~----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~ 337 (540)
T PRK13388 265 NPLRVA-F-GNEASPRDIAEFSRRFG-CQVEDGYGSSEGAVIVVREP----GTPPGSIGRGAPGVAIYNPETLTECAVAR 337 (540)
T ss_pred cceEEE-E-CCCCCHHHHHHHHHHhC-CceecccccccccceeecCC----CCCCCCCCCCCCCcEEEcCCCCcccccee
Confidence 456643 3 56778888899999886 89999999999987665322 23356789999987642 3
Q ss_pred EeCCCCccC-CCCCceEEEEE-cCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeec
Q 026632 156 VSVDTQKPL-PPNQLGEIWLR-GPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 156 ~d~~~~~~v-~~g~~Gel~v~-~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
+| ++|+++ ++++.|||+++ ++.++.||+++++.+.+.+ .+|||+|||+++++++|++++.||+||+||++|++|+|
T Consensus 338 ~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~-~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p 415 (540)
T PRK13388 338 FD-AHGALLNADEAIGELVNTAGAGFFEGYYNNPEATAERM-RHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSA 415 (540)
T ss_pred cc-CccccccCCCcceEEEEecCCcccccccCChHHHHHHh-hcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCH
Confidence 33 345554 45678999998 9999999999999998887 68999999999999999999999999999999999998
Q ss_pred CC
Q 026632 234 NW 235 (235)
Q Consensus 234 ~~ 235 (235)
.+
T Consensus 416 ~e 417 (540)
T PRK13388 416 AP 417 (540)
T ss_pred HH
Confidence 64
No 102
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=3.4e-32 Score=231.83 Aligned_cols=203 Identities=25% Similarity=0.328 Sum_probs=163.9
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceE
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKL 91 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~ 91 (235)
.+++.++++|++|.+|+ ..++.++..|+++++.+..+..........+++++++++|+++..+.+.. ...++++|.
T Consensus 159 ~~~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l~~l~~ 234 (452)
T PRK07445 159 QQVNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWLAQFRT 234 (452)
T ss_pred CCCceEeccCchhhhhH-HHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhhhcceE
Confidence 34578899999999999 57788999999999987432222233445788999999999999988632 234789999
Q ss_pred EEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceE
Q 026632 92 VGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGE 171 (235)
Q Consensus 92 i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Ge 171 (235)
++.||+++++++.+.+.+ + +.++++.||+||++..+..............+|+|.++++++++ .|+.||
T Consensus 235 i~~gG~~l~~~~~~~~~~-~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~---------~g~~Ge 303 (452)
T PRK07445 235 ILLGGAPAWPSLLEQARQ-L-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP---------ANQTGN 303 (452)
T ss_pred EEECCccCCHHHHHHHHh-c-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc---------CCCcce
Confidence 999999999999998876 4 58999999999998654433222112234578999999999887 367899
Q ss_pred EEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 172 IWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 172 l~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|++++|.++.||++++. ..++||+|||++++|++|++++.||+||+|+++|++|+|.|
T Consensus 304 l~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~e 361 (452)
T PRK07445 304 ITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAE 361 (452)
T ss_pred EEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHH
Confidence 99999999999997532 25789999999999999999999999999999999999864
No 103
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=7.4e-32 Score=239.13 Aligned_cols=223 Identities=17% Similarity=0.166 Sum_probs=179.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--c
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--V 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~--~ 81 (235)
+...++|++++..|+.|+... .++.+|..|+++++.+. .++..+++.++++++|++..+|+++..+.+... .
T Consensus 301 ~~~~~~d~~~~~~~~~~~~~~--~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~ 378 (652)
T TIGR01217 301 CDLGPGDRLFYYTTTGWMMWN--WLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPA 378 (652)
T ss_pred cCCCCCcEEEEeCCcchhhhH--HHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCcc
Confidence 455677999999999998643 35689999999999852 378999999999999998887777766654321 2
Q ss_pred CCCCCCCceEEEecccCCcHHHHHHHHHhCC-CCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCC
Q 026632 82 KKFDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT 160 (235)
Q Consensus 82 ~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~ 160 (235)
...+++++|.++++|+++++++.+++.+.++ +..+.+.||+||++.+....... .....+++|.|.++++++++|+ +
T Consensus 379 ~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~ivd~-~ 456 (652)
T TIGR01217 379 RTHDLSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPT-LPVHIGEIQAPGLGTAVQSWDP-E 456 (652)
T ss_pred ccCChhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCC-CCCcCCccCCCcCCCceEEECC-C
Confidence 3446889999999999999999999999885 34577899999986443322211 1334567889999999999995 7
Q ss_pred CccCCCCCceEEEEEcC--cccccccCCccccc--cc-c-cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 161 QKPLPPNQLGEIWLRGP--NMMRGYYNNEQATK--LT-I-DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 161 ~~~v~~g~~Gel~v~~~--~~~~~y~~~~~~~~--~~-~-~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
|+++ .|+.|||++++| .++.+||++++.+. .. + +.+|||+|||+|++|++|++++.||+||+||++|++|+|+
T Consensus 457 g~~~-~g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~ 535 (652)
T TIGR01217 457 GKPV-TGEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSA 535 (652)
T ss_pred CCCC-CCCccEEEEecCCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHH
Confidence 8888 599999999996 68899999987543 22 2 1368999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 536 E 536 (652)
T TIGR01217 536 E 536 (652)
T ss_pred H
Confidence 4
No 104
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=8.7e-32 Score=235.48 Aligned_cols=223 Identities=27% Similarity=0.388 Sum_probs=181.7
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC-CCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK-FDLS 87 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~-~~l~ 87 (235)
...++|++++.+|++|.+++...+..+++.|.++++ ..+++..+++.++++++|++.++|+++..+.+...... ..++
T Consensus 232 ~~~~~~~~~~~~p~~h~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 310 (567)
T PLN02479 232 GMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICL-RQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLP 310 (567)
T ss_pred CCCCCCEEEEecchhhhhhHHHHHHHHhhcCceEec-cCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhccccccc
Confidence 345668999999999999986555566677766655 56899999999999999999999999999887654333 2578
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCC---------CCCCCCCcccccCCCcE-EEEEe
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSF---------AGSRNIGSAGALAPGVE-ALIVS 157 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~---------~~~~~~~~~g~p~~~~~-~~~~d 157 (235)
++|.++.+|+++++++.+++.+. +.++++.||+||+++.+..+... .........|.+.++.. ++++|
T Consensus 311 ~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d 388 (567)
T PLN02479 311 RVVHVMTAGAAPPPSVLFAMSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVD 388 (567)
T ss_pred ceeEEEEcCCCCCHHHHHHHHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEc
Confidence 89999999999999999999875 48999999999996543322100 00011124566777765 78888
Q ss_pred CCCCccCCCC--CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 158 VDTQKPLPPN--QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 158 ~~~~~~v~~g--~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++++++.+ +.|||+++++.++.||+++++.+.+.+ .++||+|||+++++++|++++.||.||+|+++|++|+|+|
T Consensus 389 ~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~-~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~e 467 (567)
T PLN02479 389 TKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAF-ANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLE 467 (567)
T ss_pred CCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchh-cCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHH
Confidence 7678888754 689999999999999999999999988 6899999999999999999999999999999999999864
No 105
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-31 Score=238.96 Aligned_cols=224 Identities=17% Similarity=0.158 Sum_probs=182.3
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++..|++|+++. ..++.+|..|+++++.++ +++..+++.++++++|++.++|+++..+.+.......++
T Consensus 392 ~~l~~~d~~~~~~~l~w~~g~-~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dl 470 (728)
T PLN03052 392 LDIRKGDIVCWPTNLGWMMGP-WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDW 470 (728)
T ss_pred cCCCCCcEEEECCCcHHHhHH-HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCCh
Confidence 345677999999999999998 577899999999999874 466789999999999999999999999987754455678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++++|++++++..+++.+.++...+.+.||+||++++....... .....+.+|.|.+++++.++| ++|++++.
T Consensus 471 ssLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~ 548 (728)
T PLN03052 471 SSIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL-QPQAFAAFSTPAMGCKLFILD-DSGNPYPD 548 (728)
T ss_pred hheeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCC-CCCCCCccccCCCCceEEEEC-CCCCCCCC
Confidence 9999999999999999999988887656799999999998754432221 133456789999999999999 48999999
Q ss_pred CC--ceEEEEEcCc--ccccccCCcccccccc------cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQ--LGEIWLRGPN--MMRGYYNNEQATKLTI------DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~--~Gel~v~~~~--~~~~y~~~~~~~~~~~------~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+ .|||+++++. ...+|++++. ....| +...||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 549 g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~E 626 (728)
T PLN03052 549 DAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVE 626 (728)
T ss_pred CCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHH
Confidence 85 6999997642 2345555432 22222 12238999999999999999999999999999999999865
No 106
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-31 Score=232.20 Aligned_cols=220 Identities=25% Similarity=0.360 Sum_probs=185.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
...++|+++...|++|.+++ ...+.++..|+++++.. .+++..+++.++++++|.+.++|+++..+.+........++
T Consensus 216 ~~~~~d~~~~~~p~~h~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~ 294 (542)
T PRK06018 216 GTSAADTMLPVVPLFHANSW-GIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLP 294 (542)
T ss_pred CCCCCCEEEEecCHHHHhhh-HHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcc
Confidence 34566999999999999998 45567889999998875 57899999999999999999999999999887766666788
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---------CCCCCcccccCCCcEEEEEeC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---------SRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~~~~~~~d~ 158 (235)
++|.++.+|+++++++.+++++ ++ .++++.||+||++.++........ .......|+|.++++++++|+
T Consensus 295 ~lr~~~~~G~~l~~~~~~~~~~-~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~ 372 (542)
T PRK06018 295 HLKMVVCGGSAMPRSMIKAFED-MG-VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDD 372 (542)
T ss_pred cceEEEEcCCCCCHHHHHHHHH-hC-CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECC
Confidence 9999999999999999999999 75 999999999999987654321100 011246799999999999995
Q ss_pred CCCccCCCC--CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 159 DTQKPLPPN--QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 159 ~~~~~v~~g--~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+++.++.+ +.|||+++++.++.+|+++. ...++.++||+|||+++++++|++++.||.+|+|+++|++|+|.+
T Consensus 373 -~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~e 447 (542)
T PRK06018 373 -AGKELPWDGKTFGRLKVRGPAVAAAYYRVD---GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSID 447 (542)
T ss_pred -CCCCCCCCCCceeEEEEecCCcchhhhcCc---ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHH
Confidence 77777653 67999999999999999842 334457899999999999999999999999999999999999863
No 107
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.1e-32 Score=236.91 Aligned_cols=222 Identities=23% Similarity=0.414 Sum_probs=175.7
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCC----CHHHHHHHHHhccceEEeecHHHHHHHHhc-C---CcC
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILALAKH-G---LVK 82 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~----~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~-~---~~~ 82 (235)
.+++++++++|++|..|+...++.+++.|+++++.++. ++..+++.+++++++. ...|+++..+... . ...
T Consensus 205 ~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~-~~~p~~~~~~~~~~~~~~~~~ 283 (578)
T PRK05850 205 PPDTTVVSWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAF-SAAPNFAFELAVRKTSDDDMA 283 (578)
T ss_pred CCcceEEEECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeE-EeCCcHHHHHHHHhcchhhhc
Confidence 34689999999999999988899999999999998642 7899999999999985 4566654443321 1 112
Q ss_pred CCCCCCceEEEecccCCcHHHHHHHHHhCC-----CCceeccccccccccccccccCCCC--------------------
Q 026632 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAG-------------------- 137 (235)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~i~~~yG~tE~g~~~~~~~~~~~-------------------- 137 (235)
...++++|.++.||+++++++.++|.+.|+ +..+++.||+||++..+........
T Consensus 284 ~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 363 (578)
T PRK05850 284 GLDLGGVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCE 363 (578)
T ss_pred CcchhhheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecC
Confidence 345678999999999999999999998874 2468999999998754432211000
Q ss_pred ---CCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCccccccccc-----------CCCeEecC
Q 026632 138 ---SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-----------KKGWVHTG 203 (235)
Q Consensus 138 ---~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-----------~~g~~~Tg 203 (235)
......+|.|. +.+++++|++++++++.|+.|||+++|+.++.||+++++.+++.|. .++||+||
T Consensus 364 ~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TG 442 (578)
T PRK05850 364 TGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTG 442 (578)
T ss_pred CCCCceEEeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeecc
Confidence 00001234443 4789999987889999999999999999999999999999988873 25799999
Q ss_pred ceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 204 DLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 204 Dl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+++++ +|++++.||+||+|+++|++|+|+|
T Consensus 443 Dl~~~~-~G~l~~~GR~~d~i~~~G~~i~p~e 473 (578)
T PRK05850 443 DLGFIS-EGELFIVGRIKDLLIVDGRNHYPDD 473 (578)
T ss_pred ceeeEE-CCEEEEEcccccEEEECCeecCHHH
Confidence 999997 8999999999999999999999864
No 108
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1e-31 Score=273.19 Aligned_cols=225 Identities=18% Similarity=0.224 Sum_probs=196.0
Q ss_pred eeccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcC
Q 026632 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK 82 (235)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~ 82 (235)
..+...++|++++..|+++..+. ..++.++..|+++++.+. .++..+++.++++++|++..+|+++..++...
T Consensus 3903 ~~~~~~~~~~~~~~~s~~fd~s~-~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~--- 3978 (4334)
T PRK05691 3903 PYLALSEADVIAQTASQSFDISV-WQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED--- 3978 (4334)
T ss_pred HhcCCCccceEEEecCCchhHHH-HHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---
Confidence 34556778999999999999999 688999999999999864 57999999999999999999999999887542
Q ss_pred CCCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC--CCCCCcccccCCCcEEEEEeCCC
Q 026632 83 KFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG--SRNIGSAGALAPGVEALIVSVDT 160 (235)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~--~~~~~~~g~p~~~~~~~~~d~~~ 160 (235)
...++++|.++.|||++++++.+.|.+.+++++++|.||+||++..+........ ......+|+|+++..+.++| +.
T Consensus 3979 ~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~ 4057 (4334)
T PRK05691 3979 RQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EA 4057 (4334)
T ss_pred cccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CC
Confidence 2346789999999999999999999998888999999999999986654332211 22234689999999999999 58
Q ss_pred CccCCCCCceEEEEEcCcccccccCCccccccccc-------CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeec
Q 026632 161 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 161 ~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-------~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
++++|.|..|||+|+|+.+++||+++|+.|++.|. .++||+|||+++++++|.+.++||+|+.||++|+||.+
T Consensus 4058 ~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel 4137 (4334)
T PRK05691 4058 LELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIEL 4137 (4334)
T ss_pred CCCCCCCCceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecH
Confidence 99999999999999999999999999999998883 34699999999999999999999999999999999987
Q ss_pred CC
Q 026632 234 NW 235 (235)
Q Consensus 234 ~~ 235 (235)
.|
T Consensus 4138 ~e 4139 (4334)
T PRK05691 4138 GE 4139 (4334)
T ss_pred HH
Confidence 64
No 109
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.98 E-value=2.4e-31 Score=225.46 Aligned_cols=211 Identities=30% Similarity=0.465 Sum_probs=177.2
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+...++|++++.+|++|.+++ ..++.++..|+++++.+.+ ..+++.++++++|.+.++|+++..+++.....
T Consensus 146 ~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~---- 218 (436)
T TIGR01923 146 NLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNRLLDEGGHN---- 218 (436)
T ss_pred hcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC----
Confidence 3445667999999999999998 6788999999999998765 38999999999999999999999998865422
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.+|+++++++.+.+.+. +..+++.||+||++.............. ..+|.|++++++++..++.
T Consensus 219 ~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~-~~~G~~~~~~~~~i~~~~~------ 289 (436)
T TIGR01923 219 ENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHAR-PDVGRPLAGREIKIKVDNK------ 289 (436)
T ss_pred CceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccc-cCCCccCCCcEEEEEeCCC------
Confidence 689999999999999999998764 5999999999999876554333221222 2489999999999844322
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
++.|||+++++.++.+|+++++.+...+ .++||+|||+++++++|++++.||.||+||++|++|+|.
T Consensus 290 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~-~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~ 356 (436)
T TIGR01923 290 EGHGEIMVKGANLMKGYLYQGELTPAFE-QQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPE 356 (436)
T ss_pred CCceEEEEECCccchhhCCChhhhhhhh-cCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHH
Confidence 2779999999999999999877766554 679999999999999999999999999999999999985
No 110
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.98 E-value=4.2e-31 Score=232.60 Aligned_cols=220 Identities=23% Similarity=0.295 Sum_probs=175.9
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++.+|++|.+|+...++.++..|+++++.+++++..+++.++++++|++.++|++++.+.+..........
T Consensus 235 ~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~ 314 (600)
T PRK08279 235 LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDH 314 (600)
T ss_pred cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCc
Confidence 45667799999999999999988888899999999999999999999999999999999999999998876554444456
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCC----CcEEEEEeCCCC--
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAP----GVEALIVSVDTQ-- 161 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~----~~~~~~~d~~~~-- 161 (235)
++|.+ +|+.+++++++.+.+.|+...+++.||+||++...... ....+++|.+.+ ...+...+.+.+
T Consensus 315 ~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 387 (600)
T PRK08279 315 RLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEP 387 (600)
T ss_pred ceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCce
Confidence 77764 47789999999999999856799999999998643321 122344555444 333322222222
Q ss_pred --------ccCCCCCceEEE--EEcCcccccccCCcccccccc------cCCCeEecCceEEEcCCCcEEEEeccCCceE
Q 026632 162 --------KPLPPNQLGEIW--LRGPNMMRGYYNNEQATKLTI------DKKGWVHTGDLGYFDGDGQLYVVDRIKELIK 225 (235)
Q Consensus 162 --------~~v~~g~~Gel~--v~~~~~~~~y~~~~~~~~~~~------~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~ 225 (235)
..++.|+.||++ +.++.++.|| ++++.+...+ ..++||+|||+|+++++|++++.||.||+||
T Consensus 388 i~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik 466 (600)
T PRK08279 388 VRDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFR 466 (600)
T ss_pred eeCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEE
Confidence 357889999998 6789999999 8887776654 2368999999999999999999999999999
Q ss_pred eccEEeecCC
Q 026632 226 YKGFQVTSNW 235 (235)
Q Consensus 226 ~~G~~v~p~~ 235 (235)
++|++|+|+|
T Consensus 467 ~~G~~i~p~e 476 (600)
T PRK08279 467 WKGENVATTE 476 (600)
T ss_pred ECCcccCHHH
Confidence 9999999864
No 111
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.97 E-value=2.4e-30 Score=225.35 Aligned_cols=222 Identities=27% Similarity=0.356 Sum_probs=176.7
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCc
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSL 89 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~l 89 (235)
...++++++.+|++|..++...++.++ .+++.++..++++..+++.++++++|++.++|+++..|++........+.+.
T Consensus 220 ~~~~~~~l~~~pl~h~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 298 (545)
T PRK08162 220 MPKHPVYLWTLPMFHCNGWCFPWTVAA-RAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHP 298 (545)
T ss_pred CCCCCeeEeccCcHhhhhHHHHHHHHH-HccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccc
Confidence 445689999999999999855544445 4555555567899999999999999999999999999998755444445567
Q ss_pred eEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC-C--------CCCCCcccccCCC-cEEEEEeCC
Q 026632 90 KLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-G--------SRNIGSAGALAPG-VEALIVSVD 159 (235)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~-~--------~~~~~~~g~p~~~-~~~~~~d~~ 159 (235)
+.++.+|+++++++.+.+.+. +.++++.||+||+++.+..+.... . .......|.+.+. ..++++|++
T Consensus 299 ~~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~ 376 (545)
T PRK08162 299 VHAMVAGAAPPAAVIAKMEEI--GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPD 376 (545)
T ss_pred eEEEECCCCCCHHHHHHHHHh--CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCC
Confidence 778899999999999998764 489999999999975444322110 0 0112334555442 357888877
Q ss_pred CCccCCC-C-CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 160 TQKPLPP-N-QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 160 ~~~~v~~-g-~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++++. | +.|||+++++.++.||+++++.+...| .++||+|||++++|++|++++.||.||+++.+|++|+|.+
T Consensus 377 ~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~e 453 (545)
T PRK08162 377 TMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAF-AGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIE 453 (545)
T ss_pred CCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHh-hCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHH
Confidence 8888875 3 469999999999999999999998888 7899999999999999999999999999999999999863
No 112
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.97 E-value=6.7e-31 Score=230.41 Aligned_cols=226 Identities=25% Similarity=0.409 Sum_probs=180.9
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcC---
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHG--- 79 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~--- 79 (235)
.+...++|++++++|++|.+|+...++.++..|+++++.+. .++..+++.+.+++++.....|..+..+....
T Consensus 212 ~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~ 291 (579)
T PRK09192 212 GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK 291 (579)
T ss_pred cccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc
Confidence 44556779999999999999998788888999999877652 26889999999999987665444333333222
Q ss_pred CcCCCCCCCceEEEecccCCcHHHHHHHHHhCCC-----CceeccccccccccccccccCCCC-----------------
Q 026632 80 LVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPS-----ATVIQGYGLTETSGIATMENSFAG----------------- 137 (235)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~-----~~i~~~yG~tE~g~~~~~~~~~~~----------------- 137 (235)
.....+++++|.++.||+++++++.+.+.+.++. ..+++.||+||++.+.........
T Consensus 292 ~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (579)
T PRK09192 292 DLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKA 371 (579)
T ss_pred cccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCcee
Confidence 1223467899999999999999999999998742 358899999999865543221100
Q ss_pred ---------CCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEE
Q 026632 138 ---------SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF 208 (235)
Q Consensus 138 ---------~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~ 208 (235)
......+|+|+|+++++++|+ +++.++.|+.|||+++++.++.||+++ ..+.+.+..++||+|||++++
T Consensus 372 ~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~-~~~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~ 449 (579)
T PRK09192 372 VAPGAETRRVRTFVNCGKALPGHEIEIRNE-AGMPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL 449 (579)
T ss_pred eccCCCCccceeEeecCCcCCCcEEEEECC-CCCCCCCCCEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE
Confidence 001236899999999999995 688999999999999999999999999 566666778999999999999
Q ss_pred cCCCcEEEEeccCCceEeccEEeecCC
Q 026632 209 DGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 209 ~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++|++++.||.||+||++|++|+|.|
T Consensus 450 -~~G~l~~~GR~dd~i~~~G~~v~p~e 475 (579)
T PRK09192 450 -LDGYLYITGRAKDLIIINGRNIWPQD 475 (579)
T ss_pred -ECCEEEEEeccccEEEECCCccCHHH
Confidence 89999999999999999999999864
No 113
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.97 E-value=2.2e-30 Score=225.56 Aligned_cols=220 Identities=28% Similarity=0.441 Sum_probs=178.7
Q ss_pred cEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcC----CcCCCC
Q 026632 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHG----LVKKFD 85 (235)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~----~~~~~~ 85 (235)
|++++++|++|.+|+...++.++..|+++++.++ .++..+++.+++++++++...|..+..+.+.. .....+
T Consensus 195 d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 274 (545)
T PRK07768 195 DVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFD 274 (545)
T ss_pred ceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCC
Confidence 8999999999999997778889999999988764 26788999999999999877777666555432 111356
Q ss_pred CCCceEEEecccCCcHHHHHHHHHh---CC--CCceeccccccccccccccccCCCC-----------------------
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKN---VP--SATVIQGYGLTETSGIATMENSFAG----------------------- 137 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~---~~--~~~i~~~yG~tE~g~~~~~~~~~~~----------------------- 137 (235)
++++|.++.+|+++++++.+++.+. ++ ...+++.||+||++..+........
T Consensus 275 ~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (545)
T PRK07768 275 LSSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKG 354 (545)
T ss_pred chheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCC
Confidence 7899999999999999999999874 43 2359999999999875543221100
Q ss_pred -CCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEE
Q 026632 138 -SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYV 216 (235)
Q Consensus 138 -~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~ 216 (235)
.......|+|+++++++++| ++++++++|+.|||+++++.++.+|++++... .....++||+|||+++++++|.+++
T Consensus 355 ~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~-~~~~~~g~~~TGDl~~~~~~g~l~~ 432 (545)
T PRK07768 355 NTRRLATLGPPLPGLEVRVVD-EDGQVLPPRGVGVIELRGESVTPGYLTMDGFI-PAQDADGWLDTGDLGYLTEEGEVVV 432 (545)
T ss_pred CcceEEeccCCCCCCEEEEEC-CCCCCCCCCCEEEEEEccCcccccccCCCCCc-ccccCCCeeeccceEEEecCCEEEE
Confidence 11234689999999999999 57899999999999999999999999765443 3334678999999999999999999
Q ss_pred EeccCCceEeccEEeecCC
Q 026632 217 VDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 217 ~GR~~d~i~~~G~~v~p~~ 235 (235)
.||.||+|+++|++|+|++
T Consensus 433 ~GR~~d~i~~~G~~v~~~e 451 (545)
T PRK07768 433 CGRVKDVIIMAGRNIYPTD 451 (545)
T ss_pred EccccceEEECCEecCHHH
Confidence 9999999999999999864
No 114
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.97 E-value=1.6e-29 Score=219.21 Aligned_cols=218 Identities=22% Similarity=0.284 Sum_probs=180.4
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHH-HHHhcCC-cCCCCC
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLIL-ALAKHGL-VKKFDL 86 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~-~l~~~~~-~~~~~l 86 (235)
..+++++..+|++|..++ ..++.+++.|+++++.+ .+++..+++.++++++|.+.++|+.+. .+.+... .....+
T Consensus 217 ~~~~~~~~~~pl~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~ 295 (533)
T PRK07798 217 GPGMRRFPAPPLMHGAGQ-WAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDL 295 (533)
T ss_pred CCCceEEEecchhhhhhH-HHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCC
Confidence 456899999999999999 47889999999999998 789999999999999999999986553 3333322 234467
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCccc--ccCCCcEEEEEeCCCCccC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAG--ALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g--~p~~~~~~~~~d~~~~~~v 164 (235)
+++|.++.||+++++++.+++.+.+++..+++.||+||++.+........ . ...| .+.++..++++++ +++++
T Consensus 296 ~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-~---~~~g~~~~~~~~~~~i~~~-~~~~~ 370 (533)
T PRK07798 296 SSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-A---VHTGGPRFTIGPRTVVLDE-DGNPV 370 (533)
T ss_pred CceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC-C---ccCCCCccCCCceEEEECC-CCCCC
Confidence 89999999999999999999999997789999999999976555332111 1 1223 6778899999995 67799
Q ss_pred CCCCc--eEEEEEcCcccccccCCcccccccccC---CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQL--GEIWLRGPNMMRGYYNNEQATKLTIDK---KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~--Gel~v~~~~~~~~y~~~~~~~~~~~~~---~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|+. |+++ +++.++.+|+++++.+...|.. .+||+|||+++++++|++++.||.||+|+.+|++|+|++
T Consensus 371 ~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~e 445 (533)
T PRK07798 371 EPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEE 445 (533)
T ss_pred CCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHH
Confidence 99987 7665 5668999999999988877732 359999999999999999999999999999999999864
No 115
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.97 E-value=2.9e-29 Score=214.30 Aligned_cols=198 Identities=30% Similarity=0.461 Sum_probs=166.2
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|+++..+|++|.+|+ ..++.++..|+++++.+. ..+++.+. +++.+..+|+++..++..... ..
T Consensus 171 ~~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~ 240 (458)
T PRK09029 171 MPFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PL 240 (458)
T ss_pred CCCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc----CC
Confidence 445567999999999999998 577788999999999774 55667774 689999999999998876543 34
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.+++||+++++++.+.+.+. +.++++.||+||++........ .....+|+|++++.+++.+
T Consensus 241 ~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~---------- 304 (458)
T PRK09029 241 SLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTEMASTVCAKRA----DGLAGVGSPLPGREVKLVD---------- 304 (458)
T ss_pred cceEEEECCCCCCHHHHHHHHHc--CCcEeccccccccCcceeccCC----CCCCCCCCCCCCCEEEEeC----------
Confidence 79999999999999999998864 5899999999999875443221 1224589999999999876
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|||+++++.++.||+++++.+.... .++||+|||+++++ +|++++.||+||+||++|++|+|.|
T Consensus 305 --gel~v~g~~~~~gY~~~~~~~~~~~-~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~e 368 (458)
T PRK09029 305 --GEIWLRGASLALGYWRQGQLVPLVN-DEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEE 368 (458)
T ss_pred --CEEEEecCceeeeeecCcccccccc-CCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHH
Confidence 8999999999999999888776443 68999999999999 9999999999999999999999864
No 116
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.97 E-value=6.8e-29 Score=209.44 Aligned_cols=192 Identities=20% Similarity=0.242 Sum_probs=164.3
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+....+|+++..+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|.++++|+++..+.+.... ..
T Consensus 137 ~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~ 212 (414)
T PRK08308 137 LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----TF 212 (414)
T ss_pred hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cc
Confidence 33456689999999999999988899999999999999888999999999999999999999999999876432 23
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
+++.++.+|+++++++.+.+++. ..++++.||+||++++.... . ......+|+|++++++++.+. .+
T Consensus 213 ~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~--~--~~~~~~~G~p~~~~~~~~~~~-------~~ 279 (414)
T PRK08308 213 QFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP--D--MKSHLDLGNPLPHVSVSAGSD-------EN 279 (414)
T ss_pred cccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC--C--CCCCCccCccCCCeEEEEecC-------CC
Confidence 68899999999999999999887 36899999999998654321 1 233467899999999988752 36
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.||+++++ .++||+|||+++++++|++++.||.||+||++|++|+|.|
T Consensus 280 ~~gel~v~~-------------------~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~e 328 (414)
T PRK08308 280 APEEIVVKM-------------------GDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIE 328 (414)
T ss_pred CCceEEEEc-------------------CCceEECCceEEECCCccEEEecccCCeEEECCEEECHHH
Confidence 679999975 3579999999999999999999999999999999999864
No 117
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=99.96 E-value=5.4e-30 Score=210.99 Aligned_cols=222 Identities=29% Similarity=0.401 Sum_probs=182.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCC----HHHH----HHHHHhccceEEeecHHHHHHHHhcCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD----LEMF----LRAIEKHRVTHIWVVPPLILALAKHGL 80 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~----~~~~----~~~l~~~~~t~~~~~p~~~~~l~~~~~ 80 (235)
...+.|+++.++|+-|.+-+ ..=+.++..|+++-..++.+ ...+ -..+...+||.+.++|.+|.++.+-..
T Consensus 275 ~lg~~D~yi~yLPLAHIlEl-~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl 353 (678)
T KOG1180|consen 275 ELGPKDRYIAYLPLAHILEL-TAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVL 353 (678)
T ss_pred ccCCCceEEEechHHHHHHH-HHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHH
Confidence 34566999999999999999 56677888899998876532 1122 235678899999999998774433100
Q ss_pred -------------------------c-CC----------------CCCCCceEEEecccCCcHHHHHHHHHhCCCCceec
Q 026632 81 -------------------------V-KK----------------FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQ 118 (235)
Q Consensus 81 -------------------------~-~~----------------~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~ 118 (235)
. .. ..--++|.+++||+|++++..+.+.-.+. +++..
T Consensus 354 ~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C-~Pv~q 432 (678)
T KOG1180|consen 354 SKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFC-CPVLQ 432 (678)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcc-ccccc
Confidence 0 00 01138999999999999999999888775 79999
Q ss_pred cccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC--ceEEEEEcCcccccccCCcccccccccC
Q 026632 119 GYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ--LGEIWLRGPNMMRGYYNNEQATKLTIDK 196 (235)
Q Consensus 119 ~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~--~Gel~v~~~~~~~~y~~~~~~~~~~~~~ 196 (235)
.||.||++.-++..... +...+.+|.|++-++++++|-+++.=-..+. +|||+++|+.+..||+++|+.|++.|+.
T Consensus 433 GYGLTEtca~~tv~e~~--d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~ 510 (678)
T KOG1180|consen 433 GYGLTETCAAATVLEPE--DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTV 510 (678)
T ss_pred cccccchhcccEecChh--hcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhcee
Confidence 99999999877776555 6667899999999999999977766555554 8999999999999999999999999987
Q ss_pred -CC--eEecCceEEEcCCCcEEEEeccCCceEe-ccEEeecC
Q 026632 197 -KG--WVHTGDLGYFDGDGQLYVVDRIKELIKY-KGFQVTSN 234 (235)
Q Consensus 197 -~g--~~~TgDl~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 234 (235)
+| ||+|||+|.+.++|++.|++|++|+||+ +|+-|+.+
T Consensus 511 ~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~ 552 (678)
T KOG1180|consen 511 EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLG 552 (678)
T ss_pred cCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehH
Confidence 88 9999999999999999999999999999 89999865
No 118
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.96 E-value=3.9e-28 Score=201.15 Aligned_cols=193 Identities=27% Similarity=0.400 Sum_probs=160.9
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEE---ccCCCHHHHHHHHHhcc--ceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIIL---MAKFDLEMFLRAIEKHR--VTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~---~~~~~~~~~~~~l~~~~--~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
..++++..+|++|.+|+ ..++.++..|++.++ ...+++..+++.+++++ .++...+|+.+..+....... ..+
T Consensus 73 ~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~-~~~ 150 (358)
T PRK07824 73 GPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAAT-AAL 150 (358)
T ss_pred CCCeEEEECChHHHHHH-HHHHHHHHcCCeEEecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcccc-CCc
Confidence 34788999999999998 567888888998887 34578999999999998 566677888887776654332 357
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.||+++++++.+.+.+. ++++++.||+||++..+. ..|.|++++++++.+
T Consensus 151 ~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE~~~~~~------------~~G~~~~g~~v~i~~--------- 207 (358)
T PRK07824 151 AELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSETSGGCV------------YDGVPLDGVRVRVED--------- 207 (358)
T ss_pred ccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCccCCCcC------------cCceeCCCCEEEecC---------
Confidence 899999999999999999998864 599999999999875322 247889999988843
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|||+++++.++.||+++++.. .+..+|||+|||++++ ++|.+++.||.||+|+++|++|+|++
T Consensus 208 ---Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~e 270 (358)
T PRK07824 208 ---GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQV 270 (358)
T ss_pred ---CEEEEecCccccccCCCcccc--cccCCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHH
Confidence 899999999999999987643 3446789999999999 88999999999999999999999864
No 119
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.96 E-value=4.7e-28 Score=204.85 Aligned_cols=209 Identities=19% Similarity=0.155 Sum_probs=161.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC--C
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD--L 86 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~--l 86 (235)
+..++|++++..++.+..+.+...+.+...|++++..+..+++.+++.|++++++++.++|+++..|++.....+.. .
T Consensus 115 g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~ 194 (422)
T TIGR02155 115 GGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQ 194 (422)
T ss_pred CCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCccc
Confidence 44567898887776655554455667788899998877778899999999999999999999999988765433322 3
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceecccccccccc-ccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSG-IATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~-~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
.++|.++++|+++++++.+.+.+.|+ +++++.||+||+++ .....+.. ...+.. .+.+.+.++++|++++++++
T Consensus 195 ~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~~YG~tE~~~~~~~~~~~~---~~~g~~-~~~~~~~~eivd~~~g~~v~ 269 (422)
T TIGR02155 195 TSLQVGIFGAEPWTNAMRKEIEARLG-MKATDIYGLSEVIGPGVAMECVE---TQDGLH-IWEDHFYPEIIDPHTGEVLP 269 (422)
T ss_pred CceEEEEEeCCcCCHHHHHHHHHHhC-CceEecccchhhcCCceeecccc---cCCCce-EecCeeEEEEECCCCCCCCC
Confidence 58999999999999999999999997 99999999999853 22222211 111111 12245778899988999999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCC-C-----cEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD-G-----QLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~-g-----~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+|+.|||++++.+ ...+ +.+||+|||+++++++ | .+++.||.||+|+++|++|+|.+
T Consensus 270 ~Ge~Gelvvt~~~------------~~~~-p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~e 332 (422)
T TIGR02155 270 DGEEGELVFTTLT------------KEAL-PVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQ 332 (422)
T ss_pred CCCeeEEEEecCC------------cccc-ceeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHH
Confidence 9999999998732 2333 6789999999999765 3 46899999999999999999853
No 120
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=99.95 E-value=1.4e-26 Score=191.53 Aligned_cols=228 Identities=22% Similarity=0.248 Sum_probs=181.6
Q ss_pred eeccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
+.++..++|+++.++|++|.+|.+..+..++..|+|+|+.++|+...+|+...++++|++..+--+.+.|+..+......
T Consensus 276 ~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er 355 (649)
T KOG1179|consen 276 YVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEER 355 (649)
T ss_pred HHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhc
Confidence 34667788999999999999999999999999999999999999999999999999999999999999999998887777
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceecccccccccccccc-ccCCCCCCCCCcccccCCCcEEEEEeCCCCc--
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATM-ENSFAGSRNIGSAGALAPGVEALIVSVDTQK-- 162 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~-~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~-- 162 (235)
-+++|..+ |.-+.+++++.|.++|+..+|.+.||+||...-... +...++-.......+-+.-+++.-.|+++++
T Consensus 356 ~HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~N~d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~i 433 (649)
T KOG1179|consen 356 QHKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLVNYDGRVGACGFMSRLLKLLYPFRLIKVDPETGEPI 433 (649)
T ss_pred CceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceeeeecCccccccchhhhhhhccceEEEEecCCCCcee
Confidence 78888887 566999999999999998889999999998753221 1111111111112222233445555666666
Q ss_pred --------cCCCCCceEEEEE--c--C-cccccccCCcccccccc------cCCCeEecCceEEEcCCCcEEEEeccCCc
Q 026632 163 --------PLPPNQLGEIWLR--G--P-NMMRGYYNNEQATKLTI------DKKGWVHTGDLGYFDGDGQLYVVDRIKEL 223 (235)
Q Consensus 163 --------~v~~g~~Gel~v~--~--~-~~~~~y~~~~~~~~~~~------~~~g~~~TgDl~~~~~~g~~~~~GR~~d~ 223 (235)
+|++||.|.++-+ . | ..|.||.++...+++.. ..|-||+|||+-..|+.|++|+.+|..|+
T Consensus 434 Rd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDT 513 (649)
T KOG1179|consen 434 RDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDT 513 (649)
T ss_pred ecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCc
Confidence 5689999977543 2 2 33889998766665444 23559999999999999999999999999
Q ss_pred eEeccEEeecCC
Q 026632 224 IKYKGFQVTSNW 235 (235)
Q Consensus 224 i~~~G~~v~p~~ 235 (235)
+...|++|+.+|
T Consensus 514 FRWKGENVsTtE 525 (649)
T KOG1179|consen 514 FRWKGENVSTTE 525 (649)
T ss_pred eeecCCcccHHH
Confidence 999999999765
No 121
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.92 E-value=1.4e-23 Score=178.32 Aligned_cols=207 Identities=19% Similarity=0.075 Sum_probs=153.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC--CC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF--DL 86 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~--~l 86 (235)
+..++|+++.+.|+.+..+.....+.+...|++++.... ....++.+++++++++.++|+.+..+++..+..+. ..
T Consensus 126 G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~ 203 (445)
T TIGR03335 126 GFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAE 203 (445)
T ss_pred CCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCccc
Confidence 445679999999988877765566677888888765443 35678899999999999999998888765443332 23
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
.++|.++.+|+++++++.+.+.+.|+ +++++.||+||++. +. .+.. ..+ ...+.+.+.++++|++++.++++
T Consensus 204 ~~lr~ii~gGE~l~~~~r~~ie~~~g-~~v~~~YG~TE~~~-~~-~c~~----~~g-~h~~~d~~~vEIvDp~~~~~vp~ 275 (445)
T TIGR03335 204 SSIRRLVVGGESFADESRNYVEELWG-CEVYNTYGSTEGTM-CG-ECQA----VAG-LHVPEDLVHLDVYDPRHQRFLPD 275 (445)
T ss_pred CcceEEEEcCCCCCHHHHHHHHHHhC-CcEEecCChhhhhh-eE-EecC----CCC-ccccCCceEEEEEcCCCCCCCcC
Confidence 68999999999999999999999996 99999999999863 22 2211 001 11233557899999988899999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEc-CCC--------cEEEEeccCCceEeccEEeecC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFD-GDG--------QLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~-~~g--------~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
|+.|||++++-.-.. ....+ +--.|+|||++++. .+. ++...||.||+++++|.+|+|.
T Consensus 276 Ge~GELvvT~L~~~~--------~r~~~-PliRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~ 343 (445)
T TIGR03335 276 GECGRIVLTTLLKPG--------ERCGS-LLINYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRV 343 (445)
T ss_pred CCceEEEEEecCCCC--------ccCCc-eEEEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHH
Confidence 999999998732100 00011 34469999999963 221 2445799999999999999985
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.91 E-value=1.3e-23 Score=174.99 Aligned_cols=174 Identities=20% Similarity=0.220 Sum_probs=137.3
Q ss_pred cEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEEE
Q 026632 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVG 93 (235)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~ 93 (235)
|++++++|++|.+|+...++.++..|+++++.+++++..+++.++.+ |+++++|++++.+.+.. ..++++|. +
T Consensus 139 dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i 211 (386)
T TIGR02372 139 RRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-V 211 (386)
T ss_pred CeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-E
Confidence 68999999999999877888899999999998888999888888754 78999999999987653 24567775 6
Q ss_pred ecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEE
Q 026632 94 SGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIW 173 (235)
Q Consensus 94 ~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~ 173 (235)
++|+++++++++.+++. +...+++.||+||+++++.... ....++|.|++++.+ + ++..
T Consensus 212 ~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~-------~~~~~~~~p~~~~~~-~--~~~~---------- 270 (386)
T TIGR02372 212 SSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA-------PDDPFRLLPDLACFA-D--TLSS---------- 270 (386)
T ss_pred ecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC-------CCCCcccCCCccccC-C--CccC----------
Confidence 78999999999999886 4357999999999988655321 123456777665432 1 1100
Q ss_pred EEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 174 LRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 174 v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.+ +..|++|||+++++++|++++.||+||+|+++|++|+|++
T Consensus 271 -~g-------------------~~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~e 312 (386)
T TIGR02372 271 -AG-------------------LARRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGH 312 (386)
T ss_pred -CC-------------------ccceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHH
Confidence 01 1236899999999999999999999999999999999864
No 123
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.90 E-value=9.7e-23 Score=167.41 Aligned_cols=207 Identities=20% Similarity=0.149 Sum_probs=162.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC--CCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK--FDL 86 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~--~~l 86 (235)
+...+|++..+..+.-..|.....+.+-..|++++...+-+.+..++++..+++|++.++|+++..|++..+..+ ..-
T Consensus 130 g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~ 209 (438)
T COG1541 130 GVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDK 209 (438)
T ss_pred cCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhh
Confidence 345567777777644434433555666667888777777789999999999999999999999999999887764 344
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
.++|.++.|+|++++++++.+.+.|+ +++++.||+||..+.++..|......+ -.-+...++++||++++.+++
T Consensus 210 ~~lk~~i~gaE~~see~R~~ie~~~g-~~~~diYGltE~~g~g~~eC~~~~glh-----i~eD~~~~Ei~dP~t~e~l~d 283 (438)
T COG1541 210 LSLKKGIFGAEPWSEEMRKVIENRFG-CKAFDIYGLTEGFGPGAGECTERNGLH-----IWEDHFIFEIVDPETGEQLPD 283 (438)
T ss_pred cceeEEEEecccCCHHHHHHHHHHhC-CceeeccccccccCCcccccccccCCC-----cchhhceeeeecCCcCccCCC
Confidence 68999999999999999999999997 999999999999877543333311111 123667899999999999999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCc---------EEEEeccCCceEeccEEeecC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQ---------LYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~---------~~~~GR~~d~i~~~G~~v~p~ 234 (235)
|+.|||++++-+ +..+ +--.|+|||+..+.++.+ ..+.||.||++.+.|.+|+|.
T Consensus 284 ge~GelV~T~L~------------~~~~-PlIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~ 347 (438)
T COG1541 284 GERGELVITTLT------------KEGM-PLIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPS 347 (438)
T ss_pred CCeeEEEEEecc------------ccCc-ceEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHH
Confidence 999999998722 2222 455799999999976322 679999999999999999984
No 124
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.89 E-value=1.4e-21 Score=173.54 Aligned_cols=226 Identities=22% Similarity=0.261 Sum_probs=188.3
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+....+|+++...++.+.... ..++.++..|+++++.++ .++..+.+.+.++++|++..+|+.+..+........
T Consensus 401 ~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~ 479 (642)
T COG1020 401 RFGLDADDRVLALASLSFDASV-FEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPD 479 (642)
T ss_pred hcCCCcccEEeecCCcccchhH-HHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhcc
Confidence 3556677899999999888887 689999999999999875 489999999999999999999999998887632221
Q ss_pred --CCCCCceEEEecccCCcHHHHHHHHHhCC-CCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCC
Q 026632 84 --FDLSSLKLVGSGAAPLGKELMEECAKNVP-SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT 160 (235)
Q Consensus 84 --~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~ 160 (235)
...+.+|.+..||+.++.++.+.+..... ...+.+.||.||+...................|+|.++..+.++| +.
T Consensus 480 ~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~ 558 (642)
T COG1020 480 LISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD-QG 558 (642)
T ss_pred ccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-CC
Confidence 22335999999999999999999888764 368999999999665444332221111145789999999999999 68
Q ss_pred CccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 161 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 161 ~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+++++.|..||+++.|..+..||+++|+.+.+.|..+.+|+|||+++..++|.+.+.||.|+.+|++|++|.+.
T Consensus 559 ~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~ 632 (642)
T COG1020 559 LRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELG 632 (642)
T ss_pred CCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcH
Confidence 99999999999999999999999999999999995445899999999999999999999999999999998543
No 125
>PTZ00297 pantothenate kinase; Provisional
Probab=99.70 E-value=1.9e-16 Score=148.50 Aligned_cols=185 Identities=15% Similarity=0.094 Sum_probs=134.5
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcC--------
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK-------- 82 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~-------- 82 (235)
.++|++++++|++|.++. ...+.++..|+++.. +++..+++.+++++||+++++|.++..+......+
T Consensus 643 ~~~D~~Ls~LPLaHI~er-~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~ 718 (1452)
T PTZ00297 643 FKKHLMVHFTPFAMLFNR-VFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVY 718 (1452)
T ss_pred CCCCEEEEechHHHHHHH-HHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHH
Confidence 456999999999999996 567788999999864 47899999999999999999999888554321100
Q ss_pred ------------------CC----------------CCCCceEEEeccc--CCcHHHHHHHHHhCCCCceeccccccccc
Q 026632 83 ------------------KF----------------DLSSLKLVGSGAA--PLGKELMEECAKNVPSATVIQGYGLTETS 126 (235)
Q Consensus 83 ------------------~~----------------~l~~lr~i~~~G~--~~~~~~~~~~~~~~~~~~i~~~yG~tE~g 126 (235)
.. .-.++|.+++||. +++..+. . .+++...||+||+.
T Consensus 719 ~~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~--~i~i~~g~glTE~~ 791 (1452)
T PTZ00297 719 SWLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E--HISVCYVPCLREVF 791 (1452)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C--CceEEEecceEEee
Confidence 00 0036888888873 4443332 2 36788899999953
Q ss_pred cccccccCCCCCCCCCcccccCCCcEEEEEeC-CCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCce
Q 026632 127 GIATMENSFAGSRNIGSAGALAPGVEALIVSV-DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDL 205 (235)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~-~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl 205 (235)
. ..+.. .. ...|.|+|++++++.+. +.+. .+..|||++++ +++|+.|.+. .+||+
T Consensus 792 ~---~~~~~--~~--~~~G~PlpgvEvKI~~~~E~~~---~~~~GEIlvr~-------~kdpe~T~e~--~~gW~----- 847 (1452)
T PTZ00297 792 F---LPSEG--VF--CVDGTPAPSLQVDLEPFDEPSD---GAGIGQLVLAK-------KGEPRRTLPI--AAQWK----- 847 (1452)
T ss_pred e---ecCCC--Cc--ccCCeecCceEEEEcccccccC---CCCCCeEEEEE-------CCChHHHHHh--hCcCc-----
Confidence 2 22222 12 22399999999999874 2222 23469999964 5788888874 35664
Q ss_pred EEEcCCCcEEEEeccCCceEe-ccEEeecC
Q 026632 206 GYFDGDGQLYVVDRIKELIKY-KGFQVTSN 234 (235)
Q Consensus 206 ~~~~~~g~~~~~GR~~d~i~~-~G~~v~p~ 234 (235)
++|+++|+||+||+||+ +|++|+|+
T Consensus 848 ----~dG~L~IidRkKdlikls~GEyVaP~ 873 (1452)
T PTZ00297 848 ----RDRTLRLLGPPLGILLPVAYEYVIAA 873 (1452)
T ss_pred ----cCCeEEEEeccccceECCCCcEEcHH
Confidence 68999999999999999 89999986
No 126
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.60 E-value=1.6e-14 Score=121.29 Aligned_cols=151 Identities=17% Similarity=0.072 Sum_probs=107.8
Q ss_pred CHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccc
Q 026632 49 DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGI 128 (235)
Q Consensus 49 ~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~ 128 (235)
+.+.+++.|.+++|+++.+.|+.+..|++..+..... ..+|.++++||.++++..+.+.+.|+ +++++.||+|| |.+
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~~YG~tE-g~l 251 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQIYQATE-GFL 251 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeEccCCch-hhe
Confidence 5678999999999999999999999999876554433 47999999999999999999999997 99999999999 654
Q ss_pred cccccCCCCCCCCCcccccC-CCcEEE--EEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCce
Q 026632 129 ATMENSFAGSRNIGSAGALA-PGVEAL--IVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDL 205 (235)
Q Consensus 129 ~~~~~~~~~~~~~~~~g~p~-~~~~~~--~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl 205 (235)
+.-+ .. +. .+.. ..+.++ ++|++ ++ ++.++|+-. ...+ +--.|+|||+
T Consensus 252 a~eC-~~------g~-lHl~ed~~~vE~~ivD~~-~~-------~~~ViT~L~------------n~~~-PlIRYrtGD~ 302 (430)
T TIGR02304 252 ASTC-RC------GT-LHLNEDLVHIEKQYLDEH-KR-------FVPIITDFT------------RTTQ-PIVRYRLNDI 302 (430)
T ss_pred EEec-CC------CC-EEEccccEEEEeeEECCC-Cc-------eEEEEecCC------------Cccc-eEEeeeCCCE
Confidence 4333 21 11 1222 223444 78853 32 345666511 1111 4446999999
Q ss_pred EEEcCCC--------cE-EEEeccCCceEe---ccEEe
Q 026632 206 GYFDGDG--------QL-YVVDRIKELIKY---KGFQV 231 (235)
Q Consensus 206 ~~~~~~g--------~~-~~~GR~~d~i~~---~G~~v 231 (235)
+...++. .+ .+.||.+|++++ +|..+
T Consensus 303 ~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v 340 (430)
T TIGR02304 303 LVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQ 340 (430)
T ss_pred EEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeE
Confidence 8885442 24 488999999985 45544
No 127
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.06 E-value=3.8e-09 Score=94.59 Aligned_cols=225 Identities=17% Similarity=0.202 Sum_probs=153.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
...+..-++.+++.+...|+....+...++|...++.++ .++..++..++++++.-++.+-+.+..+.+....+-.
T Consensus 980 ~l~~~rpl~~~~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~e 1059 (1363)
T KOG3628|consen 980 QLYKSRPLLGCSSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVE 1059 (1363)
T ss_pred ccccCCceEEEecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccc
Confidence 345566677788888888888999999999999888875 3799999999999988888877777766654333222
Q ss_pred CCC------CceEEEecccCCcHHHHHHHHHhCCCC-----ceeccccccccccccccccCCCC----------------
Q 026632 85 DLS------SLKLVGSGAAPLGKELMEECAKNVPSA-----TVIQGYGLTETSGIATMENSFAG---------------- 137 (235)
Q Consensus 85 ~l~------~lr~i~~~G~~~~~~~~~~~~~~~~~~-----~i~~~yG~tE~g~~~~~~~~~~~---------------- 137 (235)
+++ +-..++..-++...++.+.|.+.|... .+.-.|++-=- +.++.+...+.
T Consensus 1060 nl~~~gnn~s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~N-p~Ic~r~~sg~~Pt~~y~D~raLR~gr 1138 (1363)
T KOG3628|consen 1060 NLSKRGNNTSSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVN-PFICLRSYSGPEPTTVYLDARALREGR 1138 (1363)
T ss_pred hhhhhhcccccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCC-hHhhhccccCCCCcceeechhhhhccc
Confidence 221 113455567788888888888876321 23333433211 11111100000
Q ss_pred --------C--CCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcc-cccccc---------cCC
Q 026632 138 --------S--RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQ-ATKLTI---------DKK 197 (235)
Q Consensus 138 --------~--~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~-~~~~~~---------~~~ 197 (235)
. ...-..|...+..++.++.|++-.++.+|+.||||+.+.+-+.+|+...+ .....| ...
T Consensus 1139 V~~ve~~ap~~l~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~ 1218 (1363)
T KOG3628|consen 1139 VRLVEVGAPHSLLLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGK 1218 (1363)
T ss_pred eeeeecCCCCccccccCCcccccceeEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccc
Confidence 0 00113477888999999999999999999999999999888887775321 111111 134
Q ss_pred CeEecCceEEEcC------C----CcEEEEeccCCceEeccEEeecC
Q 026632 198 GWVHTGDLGYFDG------D----GQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 198 g~~~TgDl~~~~~------~----g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
.|-||||+|++.. . ..+|+.|-.++.+.++|.+-+|.
T Consensus 1219 sy~RTG~LGFl~~t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~ 1265 (1363)
T KOG3628|consen 1219 SYARTGDLGFLRRTSLTDANVERHDLLYVLGAIDETLELNGLRHFPS 1265 (1363)
T ss_pred cceeeeeeeeeeeeecccccceeeeeEEEeecccceeeecCcccCcc
Confidence 5999999999842 1 35999999999999999988774
No 128
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.05 E-value=1.9e-08 Score=83.15 Aligned_cols=164 Identities=22% Similarity=0.286 Sum_probs=109.7
Q ss_pred HhhcCcEEEEcc-CCCHHHHHHHH----HhccceEEeecHHHHHHHHhcCCcCCC--CCC-CceEEEecc------cCCc
Q 026632 35 QLQKGSCIILMA-KFDLEMFLRAI----EKHRVTHIWVVPPLILALAKHGLVKKF--DLS-SLKLVGSGA------APLG 100 (235)
Q Consensus 35 ~l~~G~~~v~~~-~~~~~~~~~~l----~~~~~t~~~~~p~~~~~l~~~~~~~~~--~l~-~lr~i~~~G------~~~~ 100 (235)
.+..++.-.+.. .+|.+.+.+.+ .+.++..+++.|.++..++...+..+. .++ ..+.+..|| +.++
T Consensus 161 ~~~~~~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~ 240 (365)
T PF04443_consen 161 ELFFGSRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVS 240 (365)
T ss_pred hcccCceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccC
Confidence 344555644432 36777766655 456688899999987777665444433 333 566777776 5675
Q ss_pred -HHHHHHHHHhCCC---CceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEc
Q 026632 101 -KELMEECAKNVPS---ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRG 176 (235)
Q Consensus 101 -~~~~~~~~~~~~~---~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~ 176 (235)
++..+.+.+.|+. .++++.|||||.....+.+.. ... ...++ +.++|+++.++++.|+.|-|.+-+
T Consensus 241 r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~---~~~-----~~p~w--V~iRDp~tl~~~~~Ge~Gli~vid 310 (365)
T PF04443_consen 241 REEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGH---GHF-----HVPPW--VIIRDPETLEPLPPGETGLIQVID 310 (365)
T ss_pred HHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCC---Ccc-----cCCCe--EEEECCCCCcCCCCCCeeEEEEEc
Confidence 5777777777873 479999999998766554311 111 12244 667799999999999999999877
Q ss_pred CcccccccCCcccccccccCCCeEecCceEEEcCC--------CcEEEEeccCC
Q 026632 177 PNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD--------GQLYVVDRIKE 222 (235)
Q Consensus 177 ~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~--------g~~~~~GR~~d 222 (235)
+.... ..+..-|.|+|.+..+ .++.+.||.+.
T Consensus 311 l~~~s--------------~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 311 LANTS--------------YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred ccccC--------------CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 54221 2234789999987543 36999999763
No 129
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.90 E-value=1.8e-08 Score=91.66 Aligned_cols=201 Identities=15% Similarity=0.075 Sum_probs=120.5
Q ss_pred HHHhhcCcEEEEccCC---CHHHHHHHHHhccceEEeecHHHHHHHHhcCCc----------CCC---CCCCceEEEecc
Q 026632 33 CGQLQKGSCIILMAKF---DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV----------KKF---DLSSLKLVGSGA 96 (235)
Q Consensus 33 ~~~l~~G~~~v~~~~~---~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~----------~~~---~l~~lr~i~~~G 96 (235)
...|.+|+.+..+... ++..+.+.++++.++....+|++.++++..... ... ..+.+|....+|
T Consensus 257 ~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ 336 (1032)
T KOG1178|consen 257 GALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGG 336 (1032)
T ss_pred hhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecC
Confidence 3444555545544332 378999999999999999999997776654322 111 234899999999
Q ss_pred cCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCC--cccccCC-------CcEEEEEeCCCCccCCCC
Q 026632 97 APLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIG--SAGALAP-------GVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~--~~g~p~~-------~~~~~~~d~~~~~~v~~g 167 (235)
++...++...+.+.+...-...-|+++|.............+.-.. .++.+-. ....+... ..+.+.+.+
T Consensus 337 ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 415 (1032)
T KOG1178|consen 337 EPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGG 415 (1032)
T ss_pred CccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCc
Confidence 9999999887766654233334588887776544322111111000 0000000 01122222 234444433
Q ss_pred CceEE----EEEcCcccccccCCcccccccc-----cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEI----WLRGPNMMRGYYNNEQATKLTI-----DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel----~v~~~~~~~~y~~~~~~~~~~~-----~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.+.. +-.++....|| ..++.+...+ ..+..|+|||+|+..++|-+.+.||.|+.||.+|.|+...|
T Consensus 416 v~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~e 491 (1032)
T KOG1178|consen 416 VGKGCLGAEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGE 491 (1032)
T ss_pred ccceeecccccccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhh
Confidence 33222 22234444442 3333322222 24568999999999899999999999999999999997653
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=98.73 E-value=1.1e-07 Score=85.66 Aligned_cols=218 Identities=19% Similarity=0.194 Sum_probs=148.3
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHH----hcCC---
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALA----KHGL--- 80 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~----~~~~--- 80 (235)
...+.++.........|++..++-++++|.|.+-.++ ..+..+.+.+.++|.+++..=-.-+.+.. +.++
T Consensus 308 ~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~ 387 (1363)
T KOG3628|consen 308 PSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATL 387 (1363)
T ss_pred CcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCccccc
Confidence 3448888888899999999999999999999999986 57889999999999998655422222111 1111
Q ss_pred ----cCCCCCCCceEEEecccCCcHHHHHHHHHhC----CCCc-----------------eeccccccccccccccccCC
Q 026632 81 ----VKKFDLSSLKLVGSGAAPLGKELMEECAKNV----PSAT-----------------VIQGYGLTETSGIATMENSF 135 (235)
Q Consensus 81 ----~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~----~~~~-----------------i~~~yG~tE~g~~~~~~~~~ 135 (235)
.+-.+++++|..+..=..+..+..+-..+.| +... ...+=+++|++......+..
T Consensus 388 s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~ 467 (1363)
T KOG3628|consen 388 SFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQ 467 (1363)
T ss_pred chhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCccc
Confidence 1223678999998888888877665555544 2111 11223345666555543331
Q ss_pred CCCC----------------------------CCCcccccCC-CcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCC
Q 026632 136 AGSR----------------------------NIGSAGALAP-GVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNN 186 (235)
Q Consensus 136 ~~~~----------------------------~~~~~g~p~~-~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~ 186 (235)
.... ....++...| ++.+.++++++.++|+++++|||||.+++....|+.-
T Consensus 468 ~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al 547 (1363)
T KOG3628|consen 468 MADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYAL 547 (1363)
T ss_pred ccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeec
Confidence 1000 0123444333 4678888888999999999999999999999999987
Q ss_pred ccccccccc------------CCCeEecCceEEEcCCCcEEEEeccCCceEecc
Q 026632 187 EQATKLTID------------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKG 228 (235)
Q Consensus 187 ~~~~~~~~~------------~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G 228 (235)
+..+...|. ..-+.|||-+|++++++.+++.++.|....+.|
T Consensus 548 ~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~ 601 (1363)
T KOG3628|consen 548 DKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSG 601 (1363)
T ss_pred cccccceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhh
Confidence 777666661 123789999999987766666666665555444
No 131
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=98.42 E-value=4.5e-07 Score=70.48 Aligned_cols=56 Identities=20% Similarity=0.163 Sum_probs=51.7
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccce
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVT 63 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t 63 (235)
.....++|+++ .+|++|.+|+...++.++..|+++++.++|+++.+++.++++|+|
T Consensus 172 ~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 172 AAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred hcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 34567789999 999999999988999999999999999999999999999999986
No 132
>PRK09188 serine/threonine protein kinase; Provisional
Probab=98.13 E-value=2.4e-06 Score=70.72 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=30.6
Q ss_pred CCCeEecCceEEE-cCCCcEEEEeccCCceEecc---EEeecC
Q 026632 196 KKGWVHTGDLGYF-DGDGQLYVVDRIKELIKYKG---FQVTSN 234 (235)
Q Consensus 196 ~~g~~~TgDl~~~-~~~g~~~~~GR~~d~i~~~G---~~v~p~ 234 (235)
.+|||+|||+|++ |++|++++.||.| +| ++|+|+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~ 244 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA 244 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH
Confidence 7899999999998 6999999999998 77 788873
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.02 E-value=3.1e-05 Score=67.60 Aligned_cols=124 Identities=19% Similarity=0.255 Sum_probs=69.6
Q ss_pred CCCceE-EEecccCCcHHHHHHHHHhCCCCcee-ccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCC---
Q 026632 86 LSSLKL-VGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT--- 160 (235)
Q Consensus 86 l~~lr~-i~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~--- 160 (235)
-++++. .+++|..+ ....+.+++.+|++.+. ..|++||.. ++.... .......-.|-.+ ..+.++.++
T Consensus 266 WP~L~~v~~~~~g~~-~~y~~~l~~~~g~~~~~~~~y~ASEg~-i~i~~~----~~~~~~~l~~~~~-ffEFip~~~~~~ 338 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSM-APYAPKLREYFGGVPIQSKGYGASEGF-IGIPLD----PEDPGYVLAPDSG-FFEFIPVDEDEQ 338 (528)
T ss_dssp STT--EEEEE-SGGG-GGGHHHHHHHHTTS-EEE-EEEETTEE-EEEES-----CCC--EEE-TTSS-EEEEEE-STT--
T ss_pred CCCCcEEEEEcCCCh-HHHHHHHHHHcCCCceeeccccccceE-EEEecC----CCCCceEeecCCe-EEEEEeccCCcc
Confidence 468884 44444333 45566777778765544 799999964 333221 1111222223333 566666543
Q ss_pred -----C-----ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcC--C--CcEEEEeccCCceEe
Q 026632 161 -----Q-----KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG--D--GQLYVVDRIKELIKY 226 (235)
Q Consensus 161 -----~-----~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~--~--g~~~~~GR~~d~i~~ 226 (235)
+ ..++.|+..||++++.. |.| .|+.||+++... + ..+.|.||.+.++++
T Consensus 339 ~~~~~~~~l~~~ele~G~~YelviTt~~---GLy--------------RY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l 401 (528)
T PF03321_consen 339 NPSEQPKTLLLHELEVGEEYELVITTNS---GLY--------------RYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSL 401 (528)
T ss_dssp -----SSSEEGGG--TT-EEEEEEESTT---S-S--------------SEEECEEEEEEEEETTEEEEEEEEETTEEE-S
T ss_pred cccCCCceecHHHhcCCCeEEEEEeccc---cee--------------eeecCCEEEEeeccCCCcEEEEeccCCceeec
Confidence 2 24578899999998743 333 299999999842 2 379999999999999
Q ss_pred ccEEeec
Q 026632 227 KGFQVTS 233 (235)
Q Consensus 227 ~G~~v~p 233 (235)
.|+|++.
T Consensus 402 ~gEkl~e 408 (528)
T PF03321_consen 402 FGEKLSE 408 (528)
T ss_dssp SS--EEH
T ss_pred ceeecCH
Confidence 9999875
No 134
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.98 E-value=0.00029 Score=62.08 Aligned_cols=126 Identities=10% Similarity=0.048 Sum_probs=77.8
Q ss_pred CCC---ceEEEecccCCcHHHHHHHHHhCCCCc-eeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCC-
Q 026632 86 LSS---LKLVGSGAAPLGKELMEECAKNVPSAT-VIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDT- 160 (235)
Q Consensus 86 l~~---lr~i~~~G~~~~~~~~~~~~~~~~~~~-i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~- 160 (235)
-++ +..+..||-. ...+.++..+|+.. +...|++||+..-+-..+.+. .......-.| .+...+.++.++
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~~gi~~~~~~~-p~~~~~~l~~-~~~ffEFiP~~~~ 375 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESYFGINLNPMCK-PSEVSYTIMP-NMAYFEFLPHNHD 375 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceEEEeecCCCCC-CCCcceEecC-CcEEEEeeecccC
Confidence 356 6667766644 55566766776554 558999999653332221110 1111111112 255566664221
Q ss_pred C------------ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEc----CCCcEEEEeccCCce
Q 026632 161 Q------------KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFD----GDGQLYVVDRIKELI 224 (235)
Q Consensus 161 ~------------~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~----~~g~~~~~GR~~d~i 224 (235)
+ ..|+.|+..+++|++.+ |.| .|+.||..+.. ...++.|+||.+.++
T Consensus 376 ~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~---GLy--------------RY~iGDvVrvtgf~~~~P~i~F~gR~~~~l 438 (597)
T PLN02249 376 GDGALDETSLVELADVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFKFIRRKNVLL 438 (597)
T ss_pred CcccCCCCcEecHHHcCCCCeEEEEEEccc---cee--------------EeecCCEEEEeeccCCCcEEEEEccCCcce
Confidence 1 13578888999998632 222 39999999984 345799999999999
Q ss_pred EeccEEeec
Q 026632 225 KYKGFQVTS 233 (235)
Q Consensus 225 ~~~G~~v~p 233 (235)
++.|+|++.
T Consensus 439 s~~GEKl~e 447 (597)
T PLN02249 439 SIESDKTDE 447 (597)
T ss_pred ecccccCCH
Confidence 999999874
No 135
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.77 E-value=0.00053 Score=60.18 Aligned_cols=128 Identities=12% Similarity=0.068 Sum_probs=78.1
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCcee-ccccccccccccccccCCCCCCCCCcccccCCC-cEEEEEeCCCC---
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGSAGALAPG-VEALIVSVDTQ--- 161 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~-~~~~~~d~~~~--- 161 (235)
+++|.|.+=-..-.......++..+++..++ -.|++||+-.-+-..+.+. +. ...+...|+ .-.+.++.+++
T Consensus 293 P~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~p~~~-p~--~~sy~L~p~~~yFEFip~~~~~~~ 369 (606)
T PLN02247 293 PRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLKPLSD-PS--DVSYTLLPNMAYFEFLPVDKNNGE 369 (606)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccCcCCC-cc--CCceeecCCcEEEEEeecCCCccc
Confidence 5677644332223455556777677777766 5999999754433332211 11 111222222 22455532221
Q ss_pred --------------------------ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEE----cCC
Q 026632 162 --------------------------KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF----DGD 211 (235)
Q Consensus 162 --------------------------~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~----~~~ 211 (235)
..++.|+.-|++|++-+ |.+ .||.||+.+. +..
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~---GLY--------------RYrlGDvv~V~GF~n~~ 432 (606)
T PLN02247 370 VIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFT---GLY--------------RYRVGDILMVTGFYNNA 432 (606)
T ss_pred ccccccccccccccccccccCceecHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCCC
Confidence 13578888999998622 222 3999998887 456
Q ss_pred CcEEEEeccCCceEeccEEeecC
Q 026632 212 GQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 212 g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
..+.|++|.+.+..+.|+|++.+
T Consensus 433 P~~~Fv~R~~~vlsi~gEK~tE~ 455 (606)
T PLN02247 433 PQFRFVQRRNVVLSIDTDKTNEE 455 (606)
T ss_pred ceEEEEecCCceeecccccCCHH
Confidence 78999999999999999998643
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.67 E-value=0.00097 Score=58.56 Aligned_cols=129 Identities=12% Similarity=0.054 Sum_probs=76.9
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCcee-ccccccccccccccccCCCCCCCCCcccccCCC-cEEEEEeCCC---
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGSAGALAPG-VEALIVSVDT--- 160 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~-~~~~~~d~~~--- 160 (235)
-+++|.|-+=-..-.......++..+++..+. -.|++||+-.-+...+.+. +.. ..+...|+ .-.+.++.+.
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P~~~-p~~--~sy~L~p~~~yFEFip~~~~~~ 379 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNPLCK-PSE--VSYTLIPTMAYFEFLPVHRNNG 379 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCCCCC-ccc--ceeeecCCcEEEEEeeccCccc
Confidence 35666643332223345556666667777765 7999999754443333211 111 11222222 2234443211
Q ss_pred ----------------Cc-----cCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEE----cCCCcEE
Q 026632 161 ----------------QK-----PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYF----DGDGQLY 215 (235)
Q Consensus 161 ----------------~~-----~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~----~~~g~~~ 215 (235)
++ .++.|+.-|++|++-+ |.+ .|+.||+.+. +....+.
T Consensus 380 ~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~---GLy--------------RYrlGDvv~V~Gf~n~~P~~~ 442 (612)
T PLN02620 380 VTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYA---GLY--------------RYRVGDVLRVAGFKNKAPQFS 442 (612)
T ss_pred ccccccccccccccccCccccHHHccCCCeEEEEEEecC---ceE--------------EEecCCEEEEeeecCCCceEE
Confidence 11 2578888999998622 222 3999998887 4557899
Q ss_pred EEeccCCceEeccEEeecC
Q 026632 216 VVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 216 ~~GR~~d~i~~~G~~v~p~ 234 (235)
|++|.+.+..+.|+|++.+
T Consensus 443 Fv~R~~~~lsi~gEK~tE~ 461 (612)
T PLN02620 443 FICRKNVVLSIDSDKTDEV 461 (612)
T ss_pred EEeecCceeecccccCCHH
Confidence 9999999999999998653
No 137
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=86.59 E-value=11 Score=28.61 Aligned_cols=90 Identities=12% Similarity=0.148 Sum_probs=55.9
Q ss_pred cEEEEecCh--hHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH------HHHHHhcCCcCCC
Q 026632 14 YVFLCVLPL--FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKF 84 (235)
Q Consensus 14 d~~l~~~p~--~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~------~~~l~~~~~~~~~ 84 (235)
.+++..++. .|..|....-...-..|-.++... ...++++.+.+.+.+++.+..+-++ +..+.+..+...
T Consensus 85 ~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~- 163 (197)
T TIGR02370 85 GKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEG- 163 (197)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcC-
Confidence 455666655 688888544444446677777554 4678999999999999987776542 233333322221
Q ss_pred CCCCceEEEecccCCcHHHHH
Q 026632 85 DLSSLKLVGSGAAPLGKELME 105 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~ 105 (235)
..++++ ++.||.++.++..+
T Consensus 164 ~~~~v~-i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 164 YRDSVK-FMVGGAPVTQDWAD 183 (197)
T ss_pred CCCCCE-EEEEChhcCHHHHH
Confidence 122344 77788888765433
No 138
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=84.46 E-value=8.4 Score=27.35 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=35.0
Q ss_pred hHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecH
Q 026632 23 FHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 23 ~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p 69 (235)
.|..|........-..|-.++.... ..++++.+.+.+++++.+..+-
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 4777885444444467777777754 5789999999999999877765
No 139
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=69.27 E-value=48 Score=25.49 Aligned_cols=90 Identities=16% Similarity=0.155 Sum_probs=56.8
Q ss_pred cEEEEecC-hhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH------HHHHHhcCCcCCCC
Q 026632 14 YVFLCVLP-LFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFD 85 (235)
Q Consensus 14 d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~------~~~l~~~~~~~~~~ 85 (235)
.+++.+.+ =.|..|....-...-..|-.++... ...++.+.+.+.+.+++++..+-++ +..+.+..+..+
T Consensus 90 ~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~-- 167 (213)
T cd02069 90 KIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG-- 167 (213)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC--
Confidence 44444444 3588888444444446777777776 4679999999999999987766542 223333222222
Q ss_pred CCCceEEEecccCCcHHHHHHH
Q 026632 86 LSSLKLVGSGAAPLGKELMEEC 107 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~ 107 (235)
.+++ ++.||.+++.+..+.+
T Consensus 168 -~~~~-i~vGG~~~~~~~~~~~ 187 (213)
T cd02069 168 -IKIP-LLIGGAATSRKHTAVK 187 (213)
T ss_pred -CCCe-EEEEChhcCHHHHhhh
Confidence 1444 6668888888877653
No 140
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=65.56 E-value=12 Score=28.39 Aligned_cols=88 Identities=17% Similarity=0.198 Sum_probs=51.5
Q ss_pred cEEEEecC-hhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH------HHHHHhcCCcCCCC
Q 026632 14 YVFLCVLP-LFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFD 85 (235)
Q Consensus 14 d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~------~~~l~~~~~~~~~~ 85 (235)
.+++.+.| =.|..|....-...-..|-.++... ...++.+.+.+.+.+++.+..+-++ +..+.+..+... .
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~-~ 162 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG-L 162 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC-C
Confidence 33444444 3588888443333346777776554 4678999999999999987665532 223333222221 1
Q ss_pred CCCceEEEecccCCcHHH
Q 026632 86 LSSLKLVGSGAAPLGKEL 103 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~ 103 (235)
..+++ ++.||.+++.+.
T Consensus 163 ~~~~~-i~vGG~~~~~~~ 179 (201)
T cd02070 163 RDKVK-VMVGGAPVNQEF 179 (201)
T ss_pred CcCCe-EEEECCcCCHHH
Confidence 12343 666777887753
No 141
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=62.51 E-value=16 Score=26.96 Aligned_cols=77 Identities=8% Similarity=0.082 Sum_probs=48.2
Q ss_pred hcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEEEecccC-CcHHHHHHHHHhCCCCc
Q 026632 37 QKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKNVPSAT 115 (235)
Q Consensus 37 ~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~-~~~~~~~~~~~~~~~~~ 115 (235)
+..+.+++++......+.+.+ ..++..-+.-+.++..+++..... ..|..+.||.+ .-....+.+++.+|+.+
T Consensus 3 ~~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~~-----~~~ifllG~~~~~~~~~~~~l~~~yP~l~ 76 (172)
T PF03808_consen 3 LNSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQR-----GKRIFLLGGSEEVLEKAAANLRRRYPGLR 76 (172)
T ss_pred HHhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEeCCHHHHHHHHHHHHHHCCCeE
Confidence 345666776654455555555 556544455566777777754333 35788888865 33556668888888777
Q ss_pred eecc
Q 026632 116 VIQG 119 (235)
Q Consensus 116 i~~~ 119 (235)
+.-.
T Consensus 77 ivg~ 80 (172)
T PF03808_consen 77 IVGY 80 (172)
T ss_pred EEEe
Confidence 7643
No 142
>PLN02736 long-chain acyl-CoA synthetase
Probab=53.31 E-value=1.5e+02 Score=26.88 Aligned_cols=80 Identities=9% Similarity=0.018 Sum_probs=57.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+..++|++..+++-..... ...++++..|+..+.. +.+.++.+...+++.++..++..+..+..+.+... .++
T Consensus 99 Gv~~gd~Vai~~~n~~e~~--~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~----~~~ 172 (651)
T PLN02736 99 GIPKGACVGLYFINRPEWL--IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS----EIP 172 (651)
T ss_pred CCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh----cCC
Confidence 4466788888877665543 4667888888888866 45789999999999999999998877665544221 234
Q ss_pred CceEEEe
Q 026632 88 SLKLVGS 94 (235)
Q Consensus 88 ~lr~i~~ 94 (235)
.++.++.
T Consensus 173 ~l~~ii~ 179 (651)
T PLN02736 173 SVRLIVV 179 (651)
T ss_pred CceEEEE
Confidence 5566554
No 143
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=50.69 E-value=95 Score=22.56 Aligned_cols=88 Identities=15% Similarity=0.228 Sum_probs=57.6
Q ss_pred HHHhhcCcEEEEccCCCHHHHHHHHHhc-cceEEeecHHHHHHHHhcCCcCCCCCCCceEEEecccC-------CcHHHH
Q 026632 33 CGQLQKGSCIILMAKFDLEMFLRAIEKH-RVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-------LGKELM 104 (235)
Q Consensus 33 ~~~l~~G~~~v~~~~~~~~~~~~~l~~~-~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~-------~~~~~~ 104 (235)
..-+-.|.++++-.+.....+.+.|.+. ++|++--...+...|.+. +.++.++.||+- ..+...
T Consensus 14 ~~~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~ 85 (161)
T PF00455_consen 14 ASLIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIAL 85 (161)
T ss_pred HHhCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHH
Confidence 3445567777776777788899999887 666665555566666543 368888888832 334555
Q ss_pred HHHHHhCCCCceeccccccccccc
Q 026632 105 EECAKNVPSATVIQGYGLTETSGI 128 (235)
Q Consensus 105 ~~~~~~~~~~~i~~~yG~tE~g~~ 128 (235)
+.+++...+.-++..-|.++..++
T Consensus 86 ~~l~~~~~d~afi~~~gi~~~~G~ 109 (161)
T PF00455_consen 86 EALRQFRFDKAFIGADGISEEGGL 109 (161)
T ss_pred HHHHhhccceEEecccEecCCCcc
Confidence 666655445667777777764443
No 144
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=50.36 E-value=54 Score=19.69 Aligned_cols=34 Identities=21% Similarity=0.503 Sum_probs=26.2
Q ss_pred eEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEe
Q 026632 170 GEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVD 218 (235)
Q Consensus 170 Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~G 218 (235)
|.+|++-..- ..|-|+..||...+...+++++-+
T Consensus 25 G~vWlT~~g~---------------~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGD---------------PDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCC---------------CCCEEECCCCEEEeCCCCEEEEEe
Confidence 8899976331 156689999999998888888765
No 145
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=49.44 E-value=92 Score=22.04 Aligned_cols=79 Identities=19% Similarity=0.177 Sum_probs=46.7
Q ss_pred hHHHhHHHHHHHHh-hcCcEEEEccC-CCHHHHHHHHHhccceEEeecHH------HHHHHHhcCCcCCCCCCCceEEEe
Q 026632 23 FHVFGLAVITCGQL-QKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP------LILALAKHGLVKKFDLSSLKLVGS 94 (235)
Q Consensus 23 ~~~~g~~~~~~~~l-~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~------~~~~l~~~~~~~~~~l~~lr~i~~ 94 (235)
.|..|. ..+...| .+|-.++.... ..++++++...+++++.+..+.- .+..+.+..+... +... .++.
T Consensus 13 ~HdiGk-~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~g--l~~~-~viv 88 (134)
T TIGR01501 13 CHAVGN-KILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAG--LEGI-LLYV 88 (134)
T ss_pred hhhHhH-HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCC--CCCC-EEEe
Confidence 377777 4444444 45556665553 47999999999999987665542 2333433332222 3344 3677
Q ss_pred cccC-CcHHHHH
Q 026632 95 GAAP-LGKELME 105 (235)
Q Consensus 95 ~G~~-~~~~~~~ 105 (235)
||.+ ++++-.+
T Consensus 89 GG~~vi~~~d~~ 100 (134)
T TIGR01501 89 GGNLVVGKQDFP 100 (134)
T ss_pred cCCcCcChhhhH
Confidence 7764 5655444
No 146
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=48.91 E-value=1.2e+02 Score=23.66 Aligned_cols=90 Identities=14% Similarity=0.183 Sum_probs=56.3
Q ss_pred HHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEEEeccc-------CCcHHHHH
Q 026632 33 CGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAA-------PLGKELME 105 (235)
Q Consensus 33 ~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~-------~~~~~~~~ 105 (235)
..-+--|.++++-.+.+...+.+.|.+.+.|++--.+.+...+... ++++.++.||+ ...+...+
T Consensus 88 a~lI~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~ 159 (240)
T PRK10411 88 LAWIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLIS 159 (240)
T ss_pred HHhCCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHH
Confidence 3444556666666666677888888765666665556666666432 45778888884 33455566
Q ss_pred HHHHhCCCCceeccccccccccccc
Q 026632 106 ECAKNVPSATVIQGYGLTETSGIAT 130 (235)
Q Consensus 106 ~~~~~~~~~~i~~~yG~tE~g~~~~ 130 (235)
.+.+...+.-++..-|.++.+++..
T Consensus 160 ~l~~~~~d~afis~~gi~~~~G~~~ 184 (240)
T PRK10411 160 QLKSLEIDLFIFSCEGIDSSGALWD 184 (240)
T ss_pred HHHhcCCCEEEEeceeECCCCCccc
Confidence 6665444566778888775444433
No 147
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=48.43 E-value=7.5 Score=16.37 Aligned_cols=9 Identities=67% Similarity=1.232 Sum_probs=6.5
Q ss_pred ccccccccc
Q 026632 119 GYGLTETSG 127 (235)
Q Consensus 119 ~yG~tE~g~ 127 (235)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 388888753
No 148
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=46.02 E-value=2e+02 Score=26.43 Aligned_cols=82 Identities=11% Similarity=0.072 Sum_probs=57.7
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+..++|++..+++-.... ....++++..|+..+.. +.+.++++...+++.++.+++.....+..+.+... .++
T Consensus 127 G~~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~----~~~ 200 (696)
T PLN02387 127 GHNKEERVAIFADTRAEW--LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISS----QLE 200 (696)
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh----ccC
Confidence 345678888888755443 34667788888888876 45789999999999999999998877766654321 234
Q ss_pred CceEEEecc
Q 026632 88 SLKLVGSGA 96 (235)
Q Consensus 88 ~lr~i~~~G 96 (235)
.++.++.-+
T Consensus 201 ~l~~ii~~~ 209 (696)
T PLN02387 201 TVKRVIYMD 209 (696)
T ss_pred CceEEEEEC
Confidence 566655443
No 149
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=44.83 E-value=50 Score=22.77 Aligned_cols=17 Identities=24% Similarity=0.458 Sum_probs=14.1
Q ss_pred cccccCCCcEEEEEeCC
Q 026632 143 SAGALAPGVEALIVSVD 159 (235)
Q Consensus 143 ~~g~p~~~~~~~~~d~~ 159 (235)
..|+|.+++.+++...+
T Consensus 19 a~GkPAagv~V~L~rl~ 35 (124)
T COG2351 19 ASGKPAAGVKVELYRLE 35 (124)
T ss_pred ccCCcCCCCEEEEEEec
Confidence 57899999999988853
No 150
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=41.54 E-value=1.2e+02 Score=25.24 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=43.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEee
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV 67 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~ 67 (235)
+..++|++..+.+-...+ ...+++++..|+..++.+ ....+.+...+++.++++++.
T Consensus 42 g~~~~~~V~i~~~n~~~~--~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 42 GVKKGDRVAILLPNSIEF--VVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSTTSEEEEEESSSHHH--HHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEE
T ss_pred CCCccccccccCCcccee--eeeecccccccccccccccccccccccccccccceeEEEE
Confidence 445678888777765433 467788888899999886 467899999999999999885
No 151
>PRK07788 acyl-CoA synthetase; Validated
Probab=41.36 E-value=1.9e+02 Score=25.43 Aligned_cols=64 Identities=11% Similarity=0.012 Sum_probs=48.9
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
..++|++...++-.-. +...+++++..|+..++.++ ...+.+...+++.++..++..+.....+
T Consensus 96 i~~gd~V~i~~~n~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 96 VRAGDGVAVLARNHRG--FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLL 160 (549)
T ss_pred CCCCCEEEEEcCCCHH--HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHH
Confidence 4557888887765543 34577889999999998864 6788999999999999998877655444
No 152
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=41.00 E-value=1.3e+02 Score=24.98 Aligned_cols=64 Identities=13% Similarity=0.064 Sum_probs=49.5
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
...+|++..++|-...+ ...+++++..|+.+++.+ ....+.+...+++.+++.++..+.....+
T Consensus 22 ~~~gd~v~l~~~n~~~~--~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 22 VGPGDRVAVLLERSAEL--VVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred CCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 45668888888877543 457788888999988775 45788889999999999998887654433
No 153
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=40.67 E-value=2e+02 Score=25.53 Aligned_cols=63 Identities=16% Similarity=0.169 Sum_probs=49.0
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
..++|++...++-.... ...+++++..|+..+... .+.++.+...+++.+++.++..+..+..
T Consensus 95 v~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 158 (570)
T PRK04319 95 VEKGDRVFIFMPRIPEL--YFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLER 158 (570)
T ss_pred CCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhc
Confidence 45668888888866554 457788889999888664 5688999999999999999988876543
No 154
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=40.48 E-value=1.7e+02 Score=25.23 Aligned_cols=62 Identities=8% Similarity=-0.072 Sum_probs=47.2
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
..++|++..+++-....- ..+++++..|+..+..+ ....+.+...+++.++..++..+....
T Consensus 47 ~~~~~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 109 (515)
T TIGR03098 47 LARGERVAIYLDKRLETV--TAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLD 109 (515)
T ss_pred CCCCCEEEEEcCCCHHHH--HHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhh
Confidence 455688888887766553 46788888888888765 468899999999999998888765443
No 155
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=40.44 E-value=2.1e+02 Score=25.17 Aligned_cols=66 Identities=11% Similarity=-0.018 Sum_probs=51.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILALA 76 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~ 76 (235)
+..+++++..++|-.... ...++..+..|+..+..+ ....+++...+++.+++.++........+.
T Consensus 67 gi~~g~~V~v~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~ 133 (542)
T PRK06155 67 GVKRGDRVALMCGNRIEF--LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALE 133 (542)
T ss_pred CCCCCCEEEEECCCChHH--HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHH
Confidence 345678888887776665 357788889999988775 568899999999999999988877655543
No 156
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=39.71 E-value=2.2e+02 Score=25.27 Aligned_cols=88 Identities=13% Similarity=0.040 Sum_probs=59.8
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH-----HHHHHh---
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL-----ILALAK--- 77 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~-----~~~l~~--- 77 (235)
.++..++|++..+-|=+...- ...+++..+|...+... .....++.=.|.+.++..++..|.+ .+.+.+
T Consensus 96 ~lGL~kGDrVgvwgpN~~~w~--l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icP 173 (596)
T KOG1177|consen 96 SLGLKKGDRVGVWGPNSYEWV--LCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICP 173 (596)
T ss_pred hhcCCCCCEEEEecCChHHHH--HHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhH
Confidence 345667799999988654433 35566777788877764 4567777778999999998888753 222222
Q ss_pred ------cCCcCCCCCCCceEEEecc
Q 026632 78 ------HGLVKKFDLSSLKLVGSGA 96 (235)
Q Consensus 78 ------~~~~~~~~l~~lr~i~~~G 96 (235)
....+...++.+++++...
T Consensus 174 Ev~~~~~G~lkS~~lp~lthvi~~~ 198 (596)
T KOG1177|consen 174 EVMRGDPGQLKSELLPELTHVILAD 198 (596)
T ss_pred HhhcCCCccccccccccceEEEecC
Confidence 1223445688999988877
No 157
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=39.70 E-value=26 Score=19.72 Aligned_cols=23 Identities=26% Similarity=0.211 Sum_probs=19.5
Q ss_pred eEEEecccCCcHHHHHHHHHhCC
Q 026632 90 KLVGSGAAPLGKELMEECAKNVP 112 (235)
Q Consensus 90 r~i~~~G~~~~~~~~~~~~~~~~ 112 (235)
+.+-.+|.|++.+..+.++..|+
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~ 44 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFG 44 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHh
Confidence 34667899999999999998886
No 158
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=39.22 E-value=1.8e+02 Score=22.60 Aligned_cols=83 Identities=14% Similarity=0.186 Sum_probs=49.4
Q ss_pred hhHHHhHHHHHHHHh-hcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH------HHHHHhcCCcCCCCCCCceEEE
Q 026632 22 LFHVFGLAVITCGQL-QKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFDLSSLKLVG 93 (235)
Q Consensus 22 ~~~~~g~~~~~~~~l-~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~------~~~l~~~~~~~~~~l~~lr~i~ 93 (235)
=-|..|. ..+...+ .+|-.++-.. ...++++.+..++++++.+.++..+ ++.+.+..+..+. ..++ .+.
T Consensus 115 DvHdIGk-~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGi-Rd~v-~v~ 191 (227)
T COG5012 115 DVHDIGK-NIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGI-RDKV-IVM 191 (227)
T ss_pred cHHHHHH-HHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCC-ccCe-EEe
Confidence 3477787 4444444 3444444443 3468999999999999988776653 2223333223331 1222 345
Q ss_pred ecccCCcHHHHHHH
Q 026632 94 SGAAPLGKELMEEC 107 (235)
Q Consensus 94 ~~G~~~~~~~~~~~ 107 (235)
.||.|++.+..+++
T Consensus 192 vGGApvtq~~a~~i 205 (227)
T COG5012 192 VGGAPVTQDWADKI 205 (227)
T ss_pred ecCccccHHHHHHh
Confidence 58999988877664
No 159
>PRK08316 acyl-CoA synthetase; Validated
Probab=39.19 E-value=1.8e+02 Score=25.09 Aligned_cols=65 Identities=9% Similarity=0.016 Sum_probs=49.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++..+++-...+ ...+++++..|+..+... ....+.+...+++.++..++........+
T Consensus 57 gi~~~~~V~l~~~~~~~~--~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~ 122 (523)
T PRK08316 57 GLKKGDRVAALGHNSDAY--ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTA 122 (523)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHH
Confidence 345668888888766653 356788888898888775 45788899999999999988877655444
No 160
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=39.15 E-value=1.2e+02 Score=27.60 Aligned_cols=59 Identities=8% Similarity=-0.022 Sum_probs=47.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++...+|-.-..-. .+++++..|+..+.. +.+..+.+...+++.++..++...
T Consensus 113 Gv~~GDrV~i~~~n~~e~~~--~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 113 NISKNDNVLIYMANTLEPLI--AMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCCCEEEEECCCCHHHHH--HHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcc
Confidence 45678999999998877644 668888888887776 567899999999999999888754
No 161
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=39.07 E-value=2.4e+02 Score=24.42 Aligned_cols=63 Identities=8% Similarity=-0.036 Sum_probs=48.4
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
+..++|++..+.+-....- ..+++++..|+..+..+ ....+.+...+++.++..++..+....
T Consensus 58 g~~~~~~v~i~~~n~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 58 GIRKGDKVALHLDNCPEFI--FCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred CCCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhH
Confidence 4456688888877766553 46678888898888775 568899999999999999888776443
No 162
>PLN03102 acyl-activating enzyme; Provisional
Probab=38.31 E-value=2.1e+02 Score=25.49 Aligned_cols=62 Identities=8% Similarity=0.064 Sum_probs=47.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~ 72 (235)
+..++|++..++|-.-. +...+++.+..|++.+... ....+.+...++..++++++..+...
T Consensus 60 Gl~~gd~Vai~~~n~~e--~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (579)
T PLN03102 60 NITKNDVVSVLAPNTPA--MYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE 122 (579)
T ss_pred CCCCCCEEEEEcCCcHH--HHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH
Confidence 34567898888885443 3456788888998888775 56899999999999999988766543
No 163
>PLN02654 acetate-CoA ligase
Probab=38.28 E-value=1.3e+02 Score=27.43 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=47.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..++|-.-..- ..+++++..|+..+.. +.+..+.+...+++.++.++++...
T Consensus 141 Gv~~GdrV~i~~pn~~e~v--~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 141 GVKKGDAVVIYLPMLMELP--IAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 4567799999998776553 4778888999988877 4678999999999999998887543
No 164
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.43 E-value=2.3e+02 Score=25.08 Aligned_cols=63 Identities=14% Similarity=0.065 Sum_probs=48.9
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
..++|++..++|-.... ...+++++..|+..+... ....+.+...+.+.++..++........
T Consensus 79 i~~gd~V~l~~~n~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 142 (573)
T PRK05605 79 VRPGDRVAIVLPNCPQH--IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPT 142 (573)
T ss_pred CCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHH
Confidence 45678888888876654 356788888999988775 5689999999999999998887765443
No 165
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.22 E-value=2.4e+02 Score=24.27 Aligned_cols=63 Identities=6% Similarity=-0.091 Sum_probs=48.6
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
..+++++..+.|-...+ ...+++++..|+..+..+. .....+...+++.++..++........
T Consensus 53 ~~~~~~V~l~~~~~~~~--~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~ 116 (521)
T PRK06187 53 VKKGDRVAVFDWNSHEY--LEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPL 116 (521)
T ss_pred CCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHH
Confidence 45568888888877654 3577888899998888764 578889999999999988887765443
No 166
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=36.98 E-value=1.9e+02 Score=25.52 Aligned_cols=62 Identities=15% Similarity=0.082 Sum_probs=47.7
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
.++|++..++|-...+ ...+++++..|+..+... ....+++...++..++..++........
T Consensus 65 ~~gd~Val~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 127 (539)
T PRK06334 65 YPDQHIGIMMPASAGA--YIAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQH 127 (539)
T ss_pred ccCCeEEEEcCCchHH--HHHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHH
Confidence 4678888888866654 346788899999988875 4578889999999999988877655443
No 167
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=36.82 E-value=1.4e+02 Score=20.44 Aligned_cols=83 Identities=16% Similarity=0.018 Sum_probs=47.6
Q ss_pred hHHHhHHHHHHHHh-hcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHH------HHHHHhcCCcCCCCCCCceEEEe
Q 026632 23 FHVFGLAVITCGQL-QKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFDLSSLKLVGS 94 (235)
Q Consensus 23 ~~~~g~~~~~~~~l-~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~------~~~l~~~~~~~~~~l~~lr~i~~ 94 (235)
.|..|.. .+...+ ..|-.++.... ..++++.+.+.+.+++++..+-+. +..+++..+.. .+.+++ ++.
T Consensus 11 ~H~lG~~-~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~--~~~~i~-i~~ 86 (122)
T cd02071 11 GHDRGAK-VIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLREL--GAGDIL-VVG 86 (122)
T ss_pred hhHHHHH-HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhc--CCCCCE-EEE
Confidence 4777773 444444 45555555544 468899999999999987776432 23333332222 223444 555
Q ss_pred cccCCcHHHHHHHHHh
Q 026632 95 GAAPLGKELMEECAKN 110 (235)
Q Consensus 95 ~G~~~~~~~~~~~~~~ 110 (235)
||. .+++..+.+.+.
T Consensus 87 GG~-~~~~~~~~~~~~ 101 (122)
T cd02071 87 GGI-IPPEDYELLKEM 101 (122)
T ss_pred ECC-CCHHHHHHHHHC
Confidence 664 445555666553
No 168
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=36.62 E-value=1.9e+02 Score=22.97 Aligned_cols=81 Identities=12% Similarity=0.149 Sum_probs=46.0
Q ss_pred HHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEEEecccC-CcHHHHHHHHHh
Q 026632 32 TCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKN 110 (235)
Q Consensus 32 ~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~-~~~~~~~~~~~~ 110 (235)
-+..++..+.++++++...--..+.+-..+...-..-.-++..|++....+ ..|..+.||.+ +-.+....+++.
T Consensus 57 e~~~~i~~A~li~pDG~gvV~~ar~~~g~~~~~rv~G~Dl~~~Ll~~a~~~-----~~~vfllGgkp~V~~~a~~~l~~~ 131 (253)
T COG1922 57 EFREILNQADLILPDGIGVVRAARRLLGQPLPERVAGTDLVEALLKRAAEE-----GKRVFLLGGKPGVAEQAAAKLRAK 131 (253)
T ss_pred HHHHHHhhcCEEccCchhHHHHHHHHhCccCcccCChHHHHHHHHHHhCcc-----CceEEEecCCHHHHHHHHHHHHHH
Confidence 345555666666665544443443333322221222233555566554332 57888888876 667788888889
Q ss_pred CCCCcee
Q 026632 111 VPSATVI 117 (235)
Q Consensus 111 ~~~~~i~ 117 (235)
+|+.++.
T Consensus 132 ~p~l~iv 138 (253)
T COG1922 132 YPGLKIV 138 (253)
T ss_pred CCCceEE
Confidence 9866654
No 169
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=35.94 E-value=1.3e+02 Score=20.05 Aligned_cols=47 Identities=19% Similarity=0.273 Sum_probs=32.5
Q ss_pred hhHHHhHHHHHHHHhhc-CcEEEEccC-CCHHHHHHHHHhccceEEeecH
Q 026632 22 LFHVFGLAVITCGQLQK-GSCIILMAK-FDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 22 ~~~~~g~~~~~~~~l~~-G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p 69 (235)
-.|..|+ ..+...+.. |..+.+.+. .+.+.+.+.+.+.+++.+..+-
T Consensus 11 ~~~~lGl-~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~ 59 (121)
T PF02310_consen 11 EVHPLGL-LYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISV 59 (121)
T ss_dssp SSTSHHH-HHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEE
T ss_pred cchhHHH-HHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEc
Confidence 3456677 556666655 787777754 4679999999999999766543
No 170
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=35.63 E-value=2.1e+02 Score=25.16 Aligned_cols=63 Identities=10% Similarity=0.107 Sum_probs=47.7
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHH
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~ 72 (235)
.+..++|++..++|-...+ ...+++++..|+..+..+ .+...++...+.+.+++.++......
T Consensus 71 ~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~ 134 (560)
T PRK08751 71 LQLKKGDRVALMMPNCLQY--PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFG 134 (560)
T ss_pred hCCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhH
Confidence 3455678888888766554 356788888999998764 56788999999999999888766543
No 171
>PRK07514 malonyl-CoA synthase; Validated
Probab=35.01 E-value=2.2e+02 Score=24.53 Aligned_cols=63 Identities=8% Similarity=-0.005 Sum_probs=48.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
+..++|++..+++-.... ...+++++..|+..+..+ ......+...++..++..++..+....
T Consensus 49 g~~~gd~v~i~~~~~~e~--~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~ 112 (504)
T PRK07514 49 GVKPGDRVAVQVEKSPEA--LALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFA 112 (504)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhH
Confidence 345678888888766443 457788889999988775 467888999999999999888776544
No 172
>PF04915 DltD_N: DltD N-terminal region; InterPro: IPR006999 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the N-terminal region of DltD.; PDB: 3BMA_C.
Probab=34.93 E-value=18 Score=21.75 Aligned_cols=15 Identities=27% Similarity=0.339 Sum_probs=10.9
Q ss_pred CCCceeccccccccc
Q 026632 112 PSATVIQGYGLTETS 126 (235)
Q Consensus 112 ~~~~i~~~yG~tE~g 126 (235)
.+.+.+..|||+|-.
T Consensus 26 ~~~~yvPfyGSSEl~ 40 (62)
T PF04915_consen 26 KDPKYVPFYGSSELS 40 (62)
T ss_dssp SSS-EEEEE-SSTTT
T ss_pred cCCCeeeecCcHHHh
Confidence 456899999999976
No 173
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=34.08 E-value=1.6e+02 Score=26.80 Aligned_cols=59 Identities=10% Similarity=-0.003 Sum_probs=46.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++...+|-.-..-. .+++++..|+..+... .+..+.+...+++.++..++...
T Consensus 135 Gv~~GdrV~i~~~n~~e~~~--~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 135 GVRPGDRVSGYLPNIPQAVV--AMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CCCCCCEEEEEcCCCHHHHH--HHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 45677999999998766544 6678888888887774 57889999999999998887654
No 174
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.91 E-value=2.9e+02 Score=23.75 Aligned_cols=63 Identities=8% Similarity=0.131 Sum_probs=47.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
...++|++..+++-...+ ...+++.+..|+..++.+ ......+.+.+++.++..++..+....
T Consensus 51 gv~~g~~V~l~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~ 114 (513)
T PRK07656 51 GIGKGDRVAIWAPNSPHW--VIAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLG 114 (513)
T ss_pred CCCCCCEEEEECCCChHH--HHHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHH
Confidence 345568888888766544 357788889999988775 467888999999999999888776443
No 175
>PRK13383 acyl-CoA synthetase; Provisional
Probab=33.65 E-value=2.9e+02 Score=24.01 Aligned_cols=65 Identities=8% Similarity=0.037 Sum_probs=48.8
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++...++-.-.. ...+++.+..|+..++.+ .+..+.+...+++.++..++..+.....+
T Consensus 81 gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 146 (516)
T PRK13383 81 GVAPGRAVGVMCRNGRGF--VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERI 146 (516)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHH
Confidence 345678888888754433 346778888899999875 46789999999999999998877655443
No 176
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=32.64 E-value=2e+02 Score=26.10 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=46.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..++|-.-.. ...+++++..|+..+... .+..+.+...+++.++..++...
T Consensus 135 Gv~~gd~V~i~~~n~~e~--v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 194 (655)
T PRK03584 135 GVGPGDRVAAYLPNIPET--VVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVD 194 (655)
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEcc
Confidence 345679999999876554 347788888899887764 57889999999999998888754
No 177
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=32.62 E-value=1.9e+02 Score=26.14 Aligned_cols=59 Identities=10% Similarity=0.023 Sum_probs=46.7
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++...+|-.-.. ...+++++..|+..+.. +.+..+.+...+++.++..++...
T Consensus 104 Gv~~Gd~V~i~~~n~~e~--v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 104 GVGRGDRVLIYMPMIAEA--VFAMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECC
Confidence 456779999999877554 34678888889888776 457889999999999999888753
No 178
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=32.60 E-value=1.9e+02 Score=25.78 Aligned_cols=60 Identities=7% Similarity=-0.091 Sum_probs=49.2
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
++|++..++|..-.... .++++...|+..... +.+.++.+...+.+.++.+++.....++
T Consensus 64 kGDrV~iymp~~pe~~~--a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~ 124 (528)
T COG0365 64 KGDRVAIYMPNSPEAVI--ALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFR 124 (528)
T ss_pred CCCEEEEEcCCCHHHHH--HHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEeccccc
Confidence 78999999999988755 668888888877765 5789999999999999998887665433
No 179
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.49 E-value=2.8e+02 Score=24.20 Aligned_cols=65 Identities=8% Similarity=-0.036 Sum_probs=49.1
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++..+++-.- .+...+++++..|+..+..+ ....+.+...+++.+++.++..+.....+
T Consensus 57 g~~~g~~V~i~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 122 (546)
T PRK08314 57 GVRKGDRVLLYMQNSP--QFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKV 122 (546)
T ss_pred CCCCCCEEEEECCCCh--HHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhH
Confidence 4556688888887554 33467788888999988775 45788999999999999988877654433
No 180
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=32.23 E-value=2.4e+02 Score=21.75 Aligned_cols=85 Identities=16% Similarity=0.261 Sum_probs=51.2
Q ss_pred HHHHhhcCcEEEEccCCCHHHHHHHHHhccceEE--eecHHHHHHHHhcCCcCCCCCCCceEEEecccCCcHHHHHHHHH
Q 026632 32 TCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHI--WVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAK 109 (235)
Q Consensus 32 ~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~--~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~ 109 (235)
.-.++-.|+..++.|.+++ ++.+...++.+.++ ..+|+-+....+.. ..-+|.+= ++..-.++..+.++.
T Consensus 80 a~~a~~aGA~FivsP~~~~-~vi~~a~~~~i~~iPG~~TptEi~~a~~~G------a~~vKlFP-a~~~gg~~~lk~l~~ 151 (212)
T PRK05718 80 LAQAIEAGAQFIVSPGLTP-PLLKAAQEGPIPLIPGVSTPSELMLGMELG------LRTFKFFP-AEASGGVKMLKALAG 151 (212)
T ss_pred HHHHHHcCCCEEECCCCCH-HHHHHHHHcCCCEeCCCCCHHHHHHHHHCC------CCEEEEcc-chhccCHHHHHHHhc
Confidence 4456778999999888888 66666666777776 46666555444332 12233321 111115677777777
Q ss_pred hCCCCceeccccccc
Q 026632 110 NVPSATVIQGYGLTE 124 (235)
Q Consensus 110 ~~~~~~i~~~yG~tE 124 (235)
.||+.+++..-|-++
T Consensus 152 p~p~~~~~ptGGV~~ 166 (212)
T PRK05718 152 PFPDVRFCPTGGISP 166 (212)
T ss_pred cCCCCeEEEeCCCCH
Confidence 777777766555443
No 181
>PRK05850 acyl-CoA synthetase; Validated
Probab=32.12 E-value=2.3e+02 Score=25.08 Aligned_cols=63 Identities=11% Similarity=0.037 Sum_probs=48.4
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
.++|++..+++-+.. +...+++++..|+..+..+. ...+.+...++..++..++..+.....+
T Consensus 57 ~~gd~V~l~~~n~~~--~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 57 STGDRAVILAPQGLE--YIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCEEEEEcCCccc--HHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 356888888886644 34578888999999998863 3567888899999999999887765544
No 182
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=31.93 E-value=1.8e+02 Score=26.15 Aligned_cols=59 Identities=10% Similarity=0.048 Sum_probs=46.5
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..++|-.-..- ..+++++..|+..+... .+..+.+...+++.++..++...
T Consensus 105 Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 105 GVQRGDRVLIYMPMIAEAA--FAMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEcc
Confidence 4567799999998776653 46788888998887764 57889999999999998887654
No 183
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=31.87 E-value=20 Score=21.75 Aligned_cols=8 Identities=63% Similarity=1.211 Sum_probs=6.5
Q ss_pred CCeEecCc
Q 026632 197 KGWVHTGD 204 (235)
Q Consensus 197 ~g~~~TgD 204 (235)
..||.|||
T Consensus 72 khwydtgd 79 (80)
T PF05452_consen 72 KHWYDTGD 79 (80)
T ss_pred cccccCCC
Confidence 44999998
No 184
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=31.53 E-value=1.7e+02 Score=26.30 Aligned_cols=59 Identities=8% Similarity=0.066 Sum_probs=46.8
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..++|-...+- ..+++++..|+..+.. +.+..+.+...+++.++..++...
T Consensus 109 Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~ 168 (625)
T TIGR02188 109 GVKKGDRVAIYMPMIPEAA--IAMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITAD 168 (625)
T ss_pred CCCCCCEEEEECCCCHHHH--HHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 4567799999998766543 4678888889888876 457899999999999999888754
No 185
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=31.47 E-value=2.8e+02 Score=24.50 Aligned_cols=61 Identities=8% Similarity=0.104 Sum_probs=47.5
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~ 71 (235)
+..++|++..+++-....- ..+++.+..|+..+..+ .+..+.+...+++.++..++.....
T Consensus 71 gi~~gd~Vai~~~n~~~~~--~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 132 (562)
T PRK05677 71 DLKPGDRIAVQLPNVLQYP--VAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANM 132 (562)
T ss_pred CCCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecch
Confidence 3456789888888766553 46788999999998875 4678899999999999988876544
No 186
>PRK06839 acyl-CoA synthetase; Validated
Probab=31.31 E-value=3.4e+02 Score=23.27 Aligned_cols=64 Identities=5% Similarity=-0.020 Sum_probs=49.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++...++-.... ...+++++..|+..+..+ ....+.+...+++.+++.++..+.....
T Consensus 49 g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 113 (496)
T PRK06839 49 NVKKGERIAILSQNSLEY--IVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNM 113 (496)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHH
Confidence 345678888888766553 457788889999888876 4678889999999999999888765443
No 187
>PLN02574 4-coumarate--CoA ligase-like
Probab=30.52 E-value=3.2e+02 Score=24.10 Aligned_cols=66 Identities=20% Similarity=0.159 Sum_probs=49.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
.+..++|++..+++-... +...++.++..|+..+..++ ...+++...+++.++..++..+.....+
T Consensus 87 ~G~~~gd~V~i~~~n~~~--~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 87 MGVRQGDVVLLLLPNSVY--FPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred hCCCCCCEEEEECCCcch--HHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 345567888888875543 34567888899999888754 5788899999999998888877654443
No 188
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=30.47 E-value=1.3e+02 Score=22.41 Aligned_cols=45 Identities=20% Similarity=0.297 Sum_probs=29.3
Q ss_pred cHHHHHHHHhcCCcCCCCCCCceEEEecccC-CcHHHHHHHHHhCCCCcee
Q 026632 68 VPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKNVPSATVI 117 (235)
Q Consensus 68 ~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~-~~~~~~~~~~~~~~~~~i~ 117 (235)
-+.++..+++..... ..|..+.||.+ +-....+.+++.+|+.++.
T Consensus 33 G~dl~~~l~~~~~~~-----~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~ 78 (177)
T TIGR00696 33 GPDLMEELCQRAGKE-----KLPIFLYGGKPDVLQQLKVKLIKEYPKLKIV 78 (177)
T ss_pred hHHHHHHHHHHHHHc-----CCeEEEECCCHHHHHHHHHHHHHHCCCCEEE
Confidence 456777777654322 36777777765 4456677788888877655
No 189
>PRK09274 peptide synthase; Provisional
Probab=30.37 E-value=2.3e+02 Score=24.84 Aligned_cols=59 Identities=8% Similarity=0.122 Sum_probs=45.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...+++.++..++..+
T Consensus 62 g~~~gd~V~~~~~n~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 62 GIGRGMRAVLMVTPSLEF--FALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCCCCEEEEEeCCcHHH--HHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEecc
Confidence 345678998888765554 357788889999988875 45788888899999988887654
No 190
>PLN02246 4-coumarate--CoA ligase
Probab=30.03 E-value=2.9e+02 Score=24.11 Aligned_cols=63 Identities=10% Similarity=0.053 Sum_probs=46.4
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
+..++|++..+++-+.. +...+++++..|++.++.+ ....+.+...++..++..++.......
T Consensus 71 g~~~gd~V~i~~~~~~~--~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 134 (537)
T PLN02246 71 GIRQGDVVMLLLPNCPE--FVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVD 134 (537)
T ss_pred CCCCCCEEEEECCCChH--HHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHH
Confidence 34566888888765543 3456788888899988775 467888999999999998877655443
No 191
>PRK08162 acyl-CoA synthetase; Validated
Probab=29.77 E-value=2.9e+02 Score=24.13 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=48.7
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++...+|-.... ...++..+..|+..+..+ ....+.+...+++.+++.++..+.....
T Consensus 64 g~~~g~~v~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 128 (545)
T PRK08162 64 GIGRGDTVAVLLPNIPAM--VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEV 128 (545)
T ss_pred CCCCCCEEEEECCCchHH--HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhH
Confidence 345668888888776654 346788888888888765 4678999999999999998887765443
No 192
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=29.72 E-value=1.4e+02 Score=18.45 Aligned_cols=51 Identities=18% Similarity=0.236 Sum_probs=36.2
Q ss_pred HHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEEEecccCCcHHHHHHHHHhCCCCce
Q 026632 51 EMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECAKNVPSATV 116 (235)
Q Consensus 51 ~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i 116 (235)
..+++.+.+++++.+.- ..+-.++.+.+.+.......+.+.+.+.||+..+
T Consensus 19 ~~i~~~l~~~~v~ii~K---------------~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 19 LEILELLQRFKVSIIAK---------------DTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred HHHHHHHHHcCCeEEEE---------------ecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 46777888888876532 1233567778877777778888889889986654
No 193
>PLN03052 acetate--CoA ligase; Provisional
Probab=29.17 E-value=2.3e+02 Score=26.34 Aligned_cols=60 Identities=10% Similarity=0.089 Sum_probs=47.9
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..++|-.-.+- ..+++++..|+..+.. +.+.++.+...+++.++..++....
T Consensus 229 Gv~~GdrVai~~pn~~e~v--ia~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 229 GFEKGDAIAIDMPMNVHAV--IIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCCCCEEEEEeCCCHHHH--HHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCc
Confidence 4567799999999776653 4678888888888877 4678999999999999998887653
No 194
>PLN02614 long-chain acyl-CoA synthetase
Probab=28.87 E-value=3.7e+02 Score=24.58 Aligned_cols=65 Identities=9% Similarity=-0.076 Sum_probs=49.5
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++...++-.... ....++++..|+..+... .+..+++...+++.++.+++.....+..+
T Consensus 100 Gv~~Gd~Vai~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~ 165 (666)
T PLN02614 100 GVKDEAKCGIYGANSPEW--IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISEL 165 (666)
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHH
Confidence 445678888888866543 346788888899888875 56889999999999999998877654444
No 195
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=27.48 E-value=4.7e+02 Score=23.84 Aligned_cols=65 Identities=8% Similarity=-0.065 Sum_probs=49.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++..+++-.... ....++++..|+..+... .+..+.+...+++.++.+++.....+..+
T Consensus 98 Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~ 163 (660)
T PLN02861 98 GVNPGDRCGIYGSNCPEW--IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSI 163 (660)
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHH
Confidence 346678888888866543 346788888899888775 56789999999999999988876654444
No 196
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=27.44 E-value=1.4e+02 Score=21.99 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=37.4
Q ss_pred CcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEEEecccC-CcHHHHHHHHHhCCCCcee
Q 026632 39 GSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-LGKELMEECAKNVPSATVI 117 (235)
Q Consensus 39 G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~-~~~~~~~~~~~~~~~~~i~ 117 (235)
.+.+++++......+.+.+...... -+.-+.++..+++....+ ..|..+.|+.+ .-....+.+++.+|+.++.
T Consensus 3 ~a~~~~~DG~~l~~~~~~~~~~~~~-r~~g~dl~~~ll~~~~~~-----~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~ 76 (171)
T cd06533 3 SADLVLPDGIGVVWAARLLGGPLPE-RVTGSDLMPALLELAAQK-----GLRVFLLGAKPEVLEKAAERLRARYPGLKIV 76 (171)
T ss_pred CCCEEecCcHHHHHHHHHcCCCCCc-ccCcHHHHHHHHHHHHHc-----CCeEEEECCCHHHHHHHHHHHHHHCCCcEEE
Confidence 4455555433333333443332222 233355566666654332 36777777754 3344455677788877765
No 197
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=27.12 E-value=3.6e+02 Score=23.29 Aligned_cols=64 Identities=11% Similarity=0.081 Sum_probs=48.6
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
..++|++..++|-.... ...+++.+..|+..++.. ....+.+...+++.+++.++........+
T Consensus 33 ~~~g~~V~v~~~~~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 97 (509)
T PRK12406 33 VRPGDCVALLMRNDFAF--FEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIAHADLLHGL 97 (509)
T ss_pred CCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEEccchhhhh
Confidence 45668888887766554 357788888899988775 46788999999999999998876554443
No 198
>PRK13388 acyl-CoA synthetase; Provisional
Probab=26.83 E-value=3.7e+02 Score=23.61 Aligned_cols=60 Identities=5% Similarity=-0.104 Sum_probs=45.8
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHH
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~ 72 (235)
.++|++..+++-.... ...+++++..|+..+..+ ....+.+...+.+.+++.++......
T Consensus 50 ~~~~~V~i~~~n~~~~--v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~ 110 (540)
T PRK13388 50 DRPLHVGVLLGNTPEM--LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHR 110 (540)
T ss_pred CCCCEEEEECCCCcHH--HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhh
Confidence 3568888888755553 357788889999988775 45788899999999999888766543
No 199
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=26.51 E-value=2.9e+02 Score=24.42 Aligned_cols=59 Identities=8% Similarity=-0.083 Sum_probs=46.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..+++-...+- ..+++.+..|+..+..+ ....+++...+++.+++.++..+
T Consensus 53 Gv~~gd~V~v~~~n~~~~~--~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~ 112 (563)
T PLN02860 53 GLRNGDVVAIAALNSDLYL--EWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDE 112 (563)
T ss_pred CCCCCCEEEEEcCCCHHHH--HHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEec
Confidence 3456789998888766553 46788888899888875 46789999999999998888755
No 200
>PF04723 GRDA: Glycine reductase complex selenoprotein A; InterPro: IPR006812 Found in clostridia, this protein contains one active site selenocysteine and catalyses the reductive deamination of glycine, which is coupled to the esterification of orthophosphate resulting in the formation of ATP []. A member of this family may also exist in Treponema denticola [].; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=26.43 E-value=95 Score=22.05 Aligned_cols=27 Identities=30% Similarity=0.402 Sum_probs=11.4
Q ss_pred CcHHHHHHHHHhCCCCceeccccccccccc
Q 026632 99 LGKELMEECAKNVPSATVIQGYGLTETSGI 128 (235)
Q Consensus 99 ~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~ 128 (235)
+|-...+.+.+..+ .+++ |.+||+..|
T Consensus 17 iPgpAie~c~~~~g-aevv--fs~TeCFVc 43 (150)
T PF04723_consen 17 IPGPAIEECVKTAG-AEVV--FSSTECFVC 43 (150)
T ss_pred CCcHHHHHHHHhcC-ceEE--EEeeeEEEe
Confidence 44444444444332 3333 445554443
No 201
>PF08789 PBCV_basic_adap: PBCV-specific basic adaptor domain; InterPro: IPR014897 The small PBCV-specific basic adaptor protein is found fused to S/T protein kinases and the 2-Cysteine domain [].
Probab=26.39 E-value=1.1e+02 Score=16.69 Aligned_cols=27 Identities=15% Similarity=0.028 Sum_probs=15.2
Q ss_pred EEcCCCcEEEEeccCCceEe--ccEEeec
Q 026632 207 YFDGDGQLYVVDRIKELIKY--KGFQVTS 233 (235)
Q Consensus 207 ~~~~~g~~~~~GR~~d~i~~--~G~~v~p 233 (235)
..|..|+..+.|-+...... +|.+|++
T Consensus 3 kvdakgR~i~~g~rGg~yV~~~~GKKvyv 31 (40)
T PF08789_consen 3 KVDAKGRKIFKGPRGGTYVISDGGKKVYV 31 (40)
T ss_pred cccCcCCEEEECCCCCEEEeCCCCcEEee
Confidence 44566666777654443333 4577765
No 202
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=26.38 E-value=2.9e+02 Score=24.22 Aligned_cols=58 Identities=14% Similarity=0.163 Sum_probs=44.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeec
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~ 68 (235)
+..++|++..++|-.... ...+++++..|+..+..+ ....+.+...++..++..++..
T Consensus 70 G~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 70 GIEPGDRVAFQLPGWCEF--TIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEe
Confidence 345678888887766544 357889999999888775 4678888889999998887764
No 203
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=26.23 E-value=4.5e+02 Score=23.55 Aligned_cols=62 Identities=10% Similarity=0.016 Sum_probs=46.9
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cC-CC--HHHHHHHHHhccceEEeecHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AK-FD--LEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~-~~--~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
..++|++...++-.... ...+++++..|+..+.. +. .. .+.+...+++.++..++..+....
T Consensus 89 ~~~gd~V~l~~~n~~e~--~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 154 (612)
T PRK12476 89 AGPGDRVAILAPQGIDY--VAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAE 154 (612)
T ss_pred cCCCCEEEEECCCChhH--HHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHH
Confidence 35678888888877543 45778999999998866 32 22 678888999999999988776544
No 204
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=26.13 E-value=3.2e+02 Score=23.47 Aligned_cols=51 Identities=8% Similarity=-0.046 Sum_probs=34.8
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccc
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRV 62 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~ 62 (235)
+-.+++...|..+-.-....+..++..|.++++-+. +....+.+.+.+..+
T Consensus 112 P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~~p 166 (422)
T cd07080 112 PRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADVDP 166 (422)
T ss_pred CCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhcCC
Confidence 337788888887766555778899999999998753 233445555555433
No 205
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=26.10 E-value=4.7e+02 Score=23.29 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=48.4
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++..+++-.... ...+++++..|+..+..+ ....+.+...+++.++..++........
T Consensus 83 g~~~gd~V~i~~~n~~~~--v~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 147 (600)
T PRK08279 83 GVGKGDVVALLMENRPEY--LAAWLGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEA 147 (600)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHH
Confidence 345678888888766554 457788889999888775 4578888999999999998887755443
No 206
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=26.00 E-value=5.5e+02 Score=24.06 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=55.1
Q ss_pred cEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCCceEE
Q 026632 14 YVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSSLKLV 92 (235)
Q Consensus 14 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i 92 (235)
|++..+++=..- +....++++..|++.+.. +.+.++++...+.+-++.+++..+..+..+.+... .++.++.+
T Consensus 131 d~V~i~~~N~~e--w~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~----~~~~l~~i 204 (746)
T PTZ00342 131 KLLGLYGSNSIN--WLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKN----ELPHLKKL 204 (746)
T ss_pred cEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhc----cCCCceEE
Confidence 677777764433 335667788888888776 56789999999999999999988777776655322 24567776
Q ss_pred Eecc
Q 026632 93 GSGA 96 (235)
Q Consensus 93 ~~~G 96 (235)
+.-+
T Consensus 205 i~~~ 208 (746)
T PTZ00342 205 IILD 208 (746)
T ss_pred EEEC
Confidence 5543
No 207
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.99 E-value=4.2e+02 Score=23.49 Aligned_cols=65 Identities=11% Similarity=-0.036 Sum_probs=48.7
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++...++-.... ...+++.+..|+..+..+ ....+.+...++..++..++..+.....+
T Consensus 60 g~~~gd~V~~~~~n~~e~--~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 60 GITGDQRVGSMMYNCAEH--LEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred CCCCCCEEEEEeCCCHHH--HHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 345568888887765544 346788888899888875 46788999999999999998877654443
No 208
>PRK09490 metH B12-dependent methionine synthase; Provisional
Probab=25.83 E-value=3.7e+02 Score=26.96 Aligned_cols=86 Identities=13% Similarity=0.101 Sum_probs=52.1
Q ss_pred cEEEEecC-hhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH------HHHHHhcCCcCCCC
Q 026632 14 YVFLCVLP-LFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFD 85 (235)
Q Consensus 14 d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~------~~~l~~~~~~~~~~ 85 (235)
.+++.+.+ =.|..|....-...-.+|-.++... ...++.+.+.+.+++++++.++-.+ +..+++..+..+
T Consensus 753 kvvlaTv~GDvHDIGkniV~~~L~~~GfeVIdLG~~vp~e~iv~aa~e~~~diVgLS~L~t~s~~~m~~~i~~L~~~g-- 830 (1229)
T PRK09490 753 KILMATVKGDVHDIGKNIVGVVLQCNNYEVIDLGVMVPAEKILETAKEENADIIGLSGLITPSLDEMVHVAKEMERQG-- 830 (1229)
T ss_pred eEEEEeCCCCcchHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHhCCCEEEEcCcchhhHHHHHHHHHHHHhcC--
Confidence 33444444 3588888444444446677777765 4679999999999999987665422 222222222222
Q ss_pred CCCceEEEecccCCcHHH
Q 026632 86 LSSLKLVGSGAAPLGKEL 103 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~ 103 (235)
.+++ ++.||.+++...
T Consensus 831 -~~v~-v~vGGa~~s~~~ 846 (1229)
T PRK09490 831 -FTIP-LLIGGATTSKAH 846 (1229)
T ss_pred -CCCe-EEEEeeccchhh
Confidence 2343 667888888644
No 209
>PRK05857 acyl-CoA synthetase; Validated
Probab=25.62 E-value=3e+02 Score=24.18 Aligned_cols=60 Identities=8% Similarity=-0.035 Sum_probs=46.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..+++-...+- ..+++++..|+..++.+ .+..+.+.+.++..++..++..+.
T Consensus 62 g~~~g~~V~i~~~~~~e~~--~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~ 122 (540)
T PRK05857 62 SVSRGSRVLVISDNGPETY--LSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPG 122 (540)
T ss_pred CcCCCCEEEEEcCCCHHHH--HHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEecc
Confidence 3456788888887766653 47788999999999875 467888888998888888777664
No 210
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=25.36 E-value=2.8e+02 Score=24.97 Aligned_cols=59 Identities=10% Similarity=0.038 Sum_probs=46.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..++|-.-.+- ..+++++..|+..+... .+..+.+...+++.++..++...
T Consensus 119 Gv~~gd~V~i~~~n~~e~~--~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~ 178 (637)
T PRK00174 119 GVKKGDRVAIYMPMIPEAA--VAMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITAD 178 (637)
T ss_pred CCCCCCEEEEEcCCCHHHH--HHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcC
Confidence 3456799998888766653 46788888999888774 56889999999999999887654
No 211
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=25.27 E-value=3.5e+02 Score=22.65 Aligned_cols=59 Identities=10% Similarity=-0.045 Sum_probs=45.5
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
...+|++..+++-.-.. ...+++.+..|+..++.+ ....+.+...+++.++..++..+.
T Consensus 21 ~~~gd~v~i~~~~~~~~--~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 21 IRSGSRVALVGQNSIEM--VLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CCCCCEEEEEcCCCHHH--HHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 45678888888877543 357788889999888875 457888888999999988876654
No 212
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=25.12 E-value=3.2e+02 Score=24.01 Aligned_cols=59 Identities=15% Similarity=0.140 Sum_probs=45.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..+++-.... ...++..+..|+..+... ....+.+...++..++..++...
T Consensus 76 g~~~g~~Val~~~n~~e~--~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 76 GVGRGDVVSCQLPNWWEF--TVLYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred CCCCCCEEEEECCCChHH--HHHHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEec
Confidence 345678888888866655 357788899999988775 45788899999999998887654
No 213
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=24.57 E-value=4.9e+02 Score=22.89 Aligned_cols=61 Identities=10% Similarity=0.117 Sum_probs=46.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~ 71 (235)
+..++|++..+++-....- ..++.++..|+..+..+ ....+.+...+++.+++.++.....
T Consensus 69 gi~~gd~V~i~~~n~~~~~--~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~ 130 (557)
T PRK07059 69 GLAKGARVAIMMPNVLQYP--VAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENF 130 (557)
T ss_pred CCCCCCEEEEECCCCHHHH--HHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhh
Confidence 3456788888877666553 46688889999998775 4578899999999999988876654
No 214
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.30 E-value=4.4e+02 Score=22.65 Aligned_cols=63 Identities=10% Similarity=-0.029 Sum_probs=48.2
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
..++|++...++-+...- ..+++++..|+..+..+ .+..+.+...+++.+++.++..+.....
T Consensus 33 ~~~~~~V~i~~~~~~~~~--~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~ 96 (502)
T PRK08276 33 LREGDVVAILLENNPEFF--EVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVSAALADT 96 (502)
T ss_pred CCCCCEEEEEeCCCHHHH--HHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEccchhhH
Confidence 456788888888776553 46788889999888775 4578888899999999988887765443
No 215
>TIGR02082 metH 5-methyltetrahydrofolate--homocysteine methyltransferase. S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase.
Probab=24.08 E-value=5.1e+02 Score=25.93 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=55.2
Q ss_pred cEEEEecC-hhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH------HHHHHhcCCcCCCC
Q 026632 14 YVFLCVLP-LFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL------ILALAKHGLVKKFD 85 (235)
Q Consensus 14 d~~l~~~p-~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~------~~~l~~~~~~~~~~ 85 (235)
.+++.+.+ =-|..|....-...-.+|-.++-.. ...++.+++.+.+++++++.++-.+ +..+++..+..+.
T Consensus 734 kVvlaTV~GDvHDIGKnIV~~~L~~~GfeVIdLG~dVp~e~iv~aa~e~~~diVgLS~Lmt~t~~~m~~vi~~L~~~g~- 812 (1178)
T TIGR02082 734 KIVLATVKGDVHDIGKNIVGVVLSCNGYEVVDLGVMVPIEKILEAAKDHNADVIGLSGLITPSLDEMKEVAEEMNRRGI- 812 (1178)
T ss_pred eEEEEecCCCccHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHhCCCEEEEcCcccccHHHHHHHHHHHHhcCC-
Confidence 44444444 3488888444444446677777765 4679999999999999987665432 2223333222221
Q ss_pred CCCceEEEecccCCcHHHHHH
Q 026632 86 LSSLKLVGSGAAPLGKELMEE 106 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~ 106 (235)
++ .++.||.+++.+..+.
T Consensus 813 --~v-~v~vGGa~~s~~~~~~ 830 (1178)
T TIGR02082 813 --TI-PLLIGGAATSKTHTAV 830 (1178)
T ss_pred --Cc-eEEEeccccchhHHHh
Confidence 33 3667888888877654
No 216
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=23.91 E-value=2.6e+02 Score=19.57 Aligned_cols=84 Identities=15% Similarity=-0.029 Sum_probs=49.0
Q ss_pred hhHHHhHHHHHHHHhhcCcEEEEccC--CCHHHHHHHHHhccceEEeecHH------HHHHHHhcCCcCCCCCCCceEEE
Q 026632 22 LFHVFGLAVITCGQLQKGSCIILMAK--FDLEMFLRAIEKHRVTHIWVVPP------LILALAKHGLVKKFDLSSLKLVG 93 (235)
Q Consensus 22 ~~~~~g~~~~~~~~l~~G~~~v~~~~--~~~~~~~~~l~~~~~t~~~~~p~------~~~~l~~~~~~~~~~l~~lr~i~ 93 (235)
=.|..|- ..+...|..++--|+... .+++++.+...+++++++..+.. .+..+.+..+... +.+++ ++
T Consensus 13 D~Hd~g~-~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g--~~~i~-vi 88 (132)
T TIGR00640 13 DGHDRGA-KVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG--RPDIL-VV 88 (132)
T ss_pred CccHHHH-HHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC--CCCCE-EE
Confidence 3466676 455666655665555543 36899999999999998766553 2333433332222 23444 55
Q ss_pred ecccCCcHHHHHHHHHh
Q 026632 94 SGAAPLGKELMEECAKN 110 (235)
Q Consensus 94 ~~G~~~~~~~~~~~~~~ 110 (235)
.||.. +++..+.+.+.
T Consensus 89 vGG~~-~~~~~~~l~~~ 104 (132)
T TIGR00640 89 VGGVI-PPQDFDELKEM 104 (132)
T ss_pred EeCCC-ChHhHHHHHHC
Confidence 56655 45555566553
No 217
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=23.74 E-value=2.7e+02 Score=19.57 Aligned_cols=80 Identities=19% Similarity=0.160 Sum_probs=45.6
Q ss_pred hHHHhHHHHHHHHh-hcCcEEEEccC-CCHHHHHHHHHhccceEEeecHH------HHHHHHhcCCcCCCCCCCceEEEe
Q 026632 23 FHVFGLAVITCGQL-QKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP------LILALAKHGLVKKFDLSSLKLVGS 94 (235)
Q Consensus 23 ~~~~g~~~~~~~~l-~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~------~~~~l~~~~~~~~~~l~~lr~i~~ 94 (235)
.|.-|. ..+...| .+|-.++-... ..++++.+...+++++.+..+.- .+..+.+..+.. .+..++ ++.
T Consensus 11 ~HdiGk-niv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~--gl~~v~-viv 86 (128)
T cd02072 11 CHAVGN-KILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEA--GLKDIL-LYV 86 (128)
T ss_pred hhHHHH-HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHC--CCCCCe-EEE
Confidence 366666 3444444 45555555543 47899999999999987665442 233333333222 234444 555
Q ss_pred cccC-CcHHHHHH
Q 026632 95 GAAP-LGKELMEE 106 (235)
Q Consensus 95 ~G~~-~~~~~~~~ 106 (235)
||.. ++++-++.
T Consensus 87 GG~~~i~~~d~~~ 99 (128)
T cd02072 87 GGNLVVGKQDFED 99 (128)
T ss_pred ECCCCCChhhhHH
Confidence 6654 56655533
No 218
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=23.58 E-value=3.7e+02 Score=24.09 Aligned_cols=64 Identities=9% Similarity=0.054 Sum_probs=50.9
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
..++|++...+|=...+.. ..+++...|+.+.... .++..++...++.-++..++...-.+..+
T Consensus 69 i~~gDvV~i~~pNs~~~~~--~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i 133 (537)
T KOG1176|consen 69 IKKGDVVGILAPNTPEFVE--LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKI 133 (537)
T ss_pred CCCCCEEEEEcCCCHHHHH--HHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHH
Confidence 4668999999998777655 5677778888887764 57999999999999999988876655544
No 219
>PRK12583 acyl-CoA synthetase; Provisional
Probab=23.47 E-value=3.7e+02 Score=23.52 Aligned_cols=59 Identities=7% Similarity=0.022 Sum_probs=45.4
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
..++|++..++|-.... ...+++++..|+..+... .+..+.+...+.+.+++.++..+.
T Consensus 67 i~~g~~V~i~~~~~~~~--~~~~~a~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 126 (558)
T PRK12583 67 VQPGDRVGIWAPNCAEW--LLTQFATARIGAILVNINPAYRASELEYALGQSGVRWVICADA 126 (558)
T ss_pred CCCCCEEEEECCCChHH--HHHHHHHHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEecc
Confidence 45668888887766553 356788888899988765 568899999999999998887653
No 220
>PRK06178 acyl-CoA synthetase; Validated
Probab=22.95 E-value=4.9e+02 Score=22.91 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=48.5
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
..++|++...++-.... ...+++++..|+..+..+ ......+...+++.++.+++..+.....+
T Consensus 80 ~~~g~~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l 144 (567)
T PRK06178 80 VGAGDRVAVFLPNCPQF--HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVV 144 (567)
T ss_pred CCCCCEEEEECCCCcHH--HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 34568888877766654 356788888888888665 46788999999999999999888765544
No 221
>PRK09088 acyl-CoA synthetase; Validated
Probab=22.93 E-value=4.1e+02 Score=22.79 Aligned_cols=58 Identities=2% Similarity=-0.122 Sum_probs=44.5
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
..++|++..+++-....- ..++.++..|+..+..+ ....+.+...+++.+++.++...
T Consensus 44 ~~~~~~v~i~~~~~~~~~--~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 44 CVDGERLAVLARNSVWLV--ALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred CCCCCEEEEECCCCHHHH--HHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEcc
Confidence 456688888887776643 46788888888888775 46788899999999998887654
No 222
>PRK08315 AMP-binding domain protein; Validated
Probab=22.76 E-value=3.7e+02 Score=23.56 Aligned_cols=60 Identities=8% Similarity=0.058 Sum_probs=46.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..+.+-...+ ...+++.+..|+..+..+ ....+.+...+++.+++.++....
T Consensus 64 gi~~g~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 124 (559)
T PRK08315 64 GIEKGDRVGIWAPNVPEW--VLTQFATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADG 124 (559)
T ss_pred CCCCCCEEEEECCCChHH--HHHHHHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEecc
Confidence 345668888887766544 457889999999998775 457888999999999998877653
No 223
>PRK07867 acyl-CoA synthetase; Validated
Probab=22.69 E-value=5.2e+02 Score=22.61 Aligned_cols=61 Identities=7% Similarity=-0.079 Sum_probs=45.6
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
.+++++..+++-.. .+...+++++..|+..+..+ ....+.+...+++.++..++.......
T Consensus 52 ~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 113 (529)
T PRK07867 52 TRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE 113 (529)
T ss_pred CCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH
Confidence 44577777776443 33457788899999998775 457889999999999999888876544
No 224
>PRK07529 AMP-binding domain protein; Validated
Probab=22.63 E-value=3.4e+02 Score=24.55 Aligned_cols=58 Identities=10% Similarity=0.016 Sum_probs=42.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeec
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVV 68 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~ 68 (235)
+..++|++..++|-...+ ...+++++..|..+.+.+...++.+...+++.++..++..
T Consensus 79 Gi~~gd~V~i~~~n~~e~--~~~~lA~~~~Gi~~pi~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 79 GVGPGDVVAFLLPNLPET--HFALWGGEAAGIANPINPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHhCEEEeCCCcCCHHHHHHHHHhcCCcEEEEe
Confidence 455679999998866554 3466677777744333355789999999999999988875
No 225
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=22.44 E-value=5.4e+02 Score=22.75 Aligned_cols=46 Identities=17% Similarity=0.177 Sum_probs=32.4
Q ss_pred cEEEEecChhHHHhH-HHHHHHHhhcCcEEEEccCC----CHHHHHHHHHh
Q 026632 14 YVFLCVLPLFHVFGL-AVITCGQLQKGSCIILMAKF----DLEMFLRAIEK 59 (235)
Q Consensus 14 d~~l~~~p~~~~~g~-~~~~~~~l~~G~~~v~~~~~----~~~~~~~~l~~ 59 (235)
-+++...|+.+-..+ ...+..+|..|.++++-+.. ....+.+.+.+
T Consensus 168 GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~ 218 (512)
T cd07124 168 GVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE 218 (512)
T ss_pred eEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH
Confidence 678888888874443 35788999999999997642 34455666655
No 226
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=22.43 E-value=2.5e+02 Score=18.81 Aligned_cols=48 Identities=19% Similarity=0.106 Sum_probs=33.5
Q ss_pred hhHHHhHHHHHHHHh-hcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 22 LFHVFGLAVITCGQL-QKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 22 ~~~~~g~~~~~~~~l-~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
=.|..|. ..+...+ ..|-.++... ...++++.+.+.+.+++++..+.+
T Consensus 10 e~H~lG~-~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 10 DGHDIGK-NIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred chhhHHH-HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 3577777 3444444 4666665544 457899999999999998777654
No 227
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.40 E-value=4.2e+02 Score=23.31 Aligned_cols=60 Identities=10% Similarity=0.158 Sum_probs=45.5
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..+++-.... ...+++++..|+..++.+ ....+.+.+.+++.++..++..+.
T Consensus 70 g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~ 130 (560)
T PRK08974 70 GLKKGDRVALMMPNLLQY--PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSN 130 (560)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEecc
Confidence 345668888887655433 457788899999999775 457888999999999998887654
No 228
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=22.38 E-value=4e+02 Score=23.54 Aligned_cols=60 Identities=7% Similarity=0.064 Sum_probs=45.8
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..+++-.... ...+++++..|+..+... ....+.+...+++.++..++..+.
T Consensus 71 gi~~gd~V~i~~~n~~e~--~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~ 131 (562)
T PRK12492 71 DLVPGDRIAVQMPNVLQY--PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNM 131 (562)
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccc
Confidence 345678888887766653 457788889998888765 467889999999999988876553
No 229
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=22.26 E-value=98 Score=18.03 Aligned_cols=17 Identities=29% Similarity=0.645 Sum_probs=11.9
Q ss_pred CceEEEcCCCcEEEEec
Q 026632 203 GDLGYFDGDGQLYVVDR 219 (235)
Q Consensus 203 gDl~~~~~~g~~~~~GR 219 (235)
|.+.+.+++|.+.+.|+
T Consensus 33 ~~i~Y~~~dg~yli~G~ 49 (57)
T PF10411_consen 33 GGILYVDEDGRYLIQGQ 49 (57)
T ss_dssp TEEEEEETTSSEEEES-
T ss_pred CeEEEEcCCCCEEEEeE
Confidence 55677778888888776
No 230
>PRK09802 DNA-binding transcriptional regulator AgaR; Provisional
Probab=22.05 E-value=4.1e+02 Score=21.17 Aligned_cols=86 Identities=16% Similarity=0.135 Sum_probs=50.4
Q ss_pred hhcCcEEEEccCCCHHHHHHHHHhc-cceEEeecHHHHHHHHhcCCcCCCCCCCceEEEecccC-------CcHHHHHHH
Q 026632 36 LQKGSCIILMAKFDLEMFLRAIEKH-RVTHIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAP-------LGKELMEEC 107 (235)
Q Consensus 36 l~~G~~~v~~~~~~~~~~~~~l~~~-~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~-------~~~~~~~~~ 107 (235)
+--|.++++-.+.+...+.+.|... ++|++--...+...+.. .++++.++.||.. ..+...+.+
T Consensus 104 I~dgd~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~--------~~~~~v~llGG~~~~~~~~~~G~~a~~~l 175 (269)
T PRK09802 104 IQPGHRVILDSGTTTFEIARLMRKHTDVIAMTNGMNVANALLE--------AEGVELLMTGGHLRRQSQSFYGDQAEQSL 175 (269)
T ss_pred CCCCCEEEECCchHHHHHHHhcCcCCCeEEEeCCHHHHHHHHh--------CCCCEEEEECCEEecCCCceECHHHHHHH
Confidence 3445666665566677888888654 35555444445555543 2356788888843 234455555
Q ss_pred HHhCCCCceecccccccccccc
Q 026632 108 AKNVPSATVIQGYGLTETSGIA 129 (235)
Q Consensus 108 ~~~~~~~~i~~~yG~tE~g~~~ 129 (235)
.....+.-++..-|..+.+++.
T Consensus 176 ~~~~~d~afig~~gi~~~~G~t 197 (269)
T PRK09802 176 QNYHFDMLFLGVDAIDLERGVS 197 (269)
T ss_pred HhccCCEEEEcCceecCCCCcC
Confidence 5543445677777776554433
No 231
>PRK06164 acyl-CoA synthetase; Validated
Probab=22.03 E-value=3.7e+02 Score=23.48 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=46.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..+++-.... ...+++.+..|+..+..+. ...+.+...+++.+++.++..+.
T Consensus 56 g~~~g~~V~i~~~n~~~~--~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 56 GVRRGDRVAVWLPNCIEW--VVLFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred CCCCCCEEEEEcCCcHHH--HHHHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccc
Confidence 345678888888777554 3577888888999888764 56788899999999998887554
No 232
>PLN02479 acetate-CoA ligase
Probab=22.02 E-value=5.6e+02 Score=22.66 Aligned_cols=61 Identities=8% Similarity=0.069 Sum_probs=47.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~ 71 (235)
+..++|++..+++-.-.. ...+++.+..|+..+..+ .+..+++...+++.++..++..+..
T Consensus 66 g~~~gd~V~i~~~n~~~~--~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 127 (567)
T PLN02479 66 SIGPGSTVAVIAPNIPAM--YEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEF 127 (567)
T ss_pred CCCCCCEEEEECCCcHHH--HHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhh
Confidence 345678888888865543 346788888898888875 4678899999999999998887654
No 233
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=21.75 E-value=3.7e+02 Score=23.59 Aligned_cols=61 Identities=8% Similarity=-0.126 Sum_probs=45.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~ 71 (235)
+..++|++..+++-....- ..++..+..|+..+..+ ....+.+...++..++..++.....
T Consensus 60 g~~~gd~v~i~~~~~~~~~--~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~ 121 (542)
T PRK06018 60 GIKLGDRVATIAWNTWRHL--EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTF 121 (542)
T ss_pred CCCCCCEEEEEcCCchHHH--HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEcccc
Confidence 3455688888877665543 36678888899888775 4578899999999999888776543
No 234
>PRK04306 50S ribosomal protein L21e; Reviewed
Probab=21.54 E-value=1.1e+02 Score=20.33 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=20.9
Q ss_pred EecCceEEEcCCCc-------EEEEeccCCceEeccE
Q 026632 200 VHTGDLGYFDGDGQ-------LYVVDRIKELIKYKGF 229 (235)
Q Consensus 200 ~~TgDl~~~~~~g~-------~~~~GR~~d~i~~~G~ 229 (235)
|+-||.+.+..++. =++.||...+++..|.
T Consensus 35 y~~Gd~V~I~~d~sv~kGmPh~~yhGkTG~V~~v~~~ 71 (98)
T PRK04306 35 FEEGDKVHIVIDPSVHKGMPHPRFHGKTGTVVGKRGR 71 (98)
T ss_pred ccCCCEEEEEecCceecCCccccccCCCEEEEeecCe
Confidence 77888888865543 3577777777777654
No 235
>PF03744 BioW: 6-carboxyhexanoate--CoA ligase; InterPro: IPR005499 This family contains the enzyme 6-carboxyhexanoate--CoA ligase 6.2.1.14 from EC. This enzyme is involved in the first step of biotin synthesis, where it converts pimelate into pimeloyl-CoA []. The enzyme requires magnesium as a cofactor and forms a homodimer [].; GO: 0009102 biotin biosynthetic process
Probab=21.42 E-value=1.8e+02 Score=22.94 Aligned_cols=11 Identities=18% Similarity=0.431 Sum_probs=9.3
Q ss_pred CCCCceEEEEE
Q 026632 165 PPNQLGEIWLR 175 (235)
Q Consensus 165 ~~g~~Gel~v~ 175 (235)
.+|.++|||+.
T Consensus 171 ~PgiiaELC~S 181 (239)
T PF03744_consen 171 APGIIAELCWS 181 (239)
T ss_pred CCcceEEEEec
Confidence 57899999985
No 236
>PRK06188 acyl-CoA synthetase; Validated
Probab=21.28 E-value=4.6e+02 Score=22.73 Aligned_cols=59 Identities=8% Similarity=-0.093 Sum_probs=45.1
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
..+++++..+++-.... ...++..+..|+..+..+ ....+.+...+...+++.++..+.
T Consensus 59 v~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 118 (524)
T PRK06188 59 LGTGDAVALLSLNRPEV--LMAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPA 118 (524)
T ss_pred CCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecc
Confidence 45568888877666544 346788889999988875 457888899999999998887765
No 237
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=21.11 E-value=72 Score=24.99 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=26.6
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceecccccc
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLT 123 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~t 123 (235)
.+...++++|+-+++++++.++. +++++|..++|
T Consensus 27 ~~advviYAGSLV~~elL~~~~~---~aei~nSa~~t 60 (254)
T COG2875 27 EKADVVIYAGSLVPPELLEYCRP---DAEIVNSASLT 60 (254)
T ss_pred hhCCEEEECCCcCCHHHHhhcCC---CCEEEecCcCC
Confidence 45567888898899988887653 58888888877
No 238
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=21.08 E-value=6.4e+02 Score=23.03 Aligned_cols=65 Identities=8% Similarity=-0.048 Sum_probs=48.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++..+++-..-. ....++++..|+..+... .+.++++...+...+++.++.....+..+
T Consensus 97 Gv~~gd~V~i~~~n~~ew--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~ 162 (660)
T PLN02430 97 GAEPGSRVGIYGSNCPQW--IVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKEL 162 (660)
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHH
Confidence 345668888887765553 346688888888888764 56889999999999999998876644433
No 239
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=20.75 E-value=68 Score=23.00 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=32.5
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccc
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTE 124 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE 124 (235)
.++....++..|..+-....+.+.+..++.+..-.||.|=
T Consensus 59 ~l~~aD~viiTGsTlvN~Ti~~iL~~~~~~~~vil~GpS~ 98 (147)
T PF04016_consen 59 ILPWADVVIITGSTLVNGTIDDILELARNAREVILYGPSA 98 (147)
T ss_dssp HGGG-SEEEEECHHCCTTTHHHHHHHTTTSSEEEEESCCG
T ss_pred HHccCCEEEEEeeeeecCCHHHHHHhCccCCeEEEEecCc
Confidence 4567888999999998899999999887677888999773
No 240
>KOG1257 consensus NADP+-dependent malic enzyme [Energy production and conversion]
Probab=20.22 E-value=1.8e+02 Score=25.81 Aligned_cols=55 Identities=11% Similarity=0.101 Sum_probs=37.2
Q ss_pred CHHHHHHHHHhccceEEeecHH--------HHHHHHhcCCcCCC------------------CCCCceEEEecccCCcHH
Q 026632 49 DLEMFLRAIEKHRVTHIWVVPP--------LILALAKHGLVKKF------------------DLSSLKLVGSGAAPLGKE 102 (235)
Q Consensus 49 ~~~~~~~~l~~~~~t~~~~~p~--------~~~~l~~~~~~~~~------------------~l~~lr~i~~~G~~~~~~ 102 (235)
....+.+.+++.||+++++... +++.|.+..++.-+ ....-|.++.+|+|.++=
T Consensus 377 ~~~~L~e~V~~vKPtvLiG~S~~~g~Fteevl~~Ma~~~erPiIFalSNPT~~aECtae~ay~~t~Gr~ifaSGSPF~pV 456 (582)
T KOG1257|consen 377 EIKDLEEAVKEVKPTVLIGASGVGGAFTEEVLRAMAKSNERPIIFALSNPTSKAECTAEQAYKWTKGRAIFASGSPFPPV 456 (582)
T ss_pred HHHHHHHHHHhcCCcEEEecccCCccCCHHHHHHHHhcCCCceEEecCCCccccccCHHHHhhhcCCcEEEecCCCCCCc
Confidence 3467889999999999988664 57777766432110 123567788888877664
Q ss_pred H
Q 026632 103 L 103 (235)
Q Consensus 103 ~ 103 (235)
.
T Consensus 457 ~ 457 (582)
T KOG1257|consen 457 E 457 (582)
T ss_pred e
Confidence 3
No 241
>PF06183 DinI: DinI-like family; InterPro: IPR010391 This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity []. The structure of DinI is known [].; PDB: 1GHH_A.
Probab=20.13 E-value=50 Score=20.06 Aligned_cols=26 Identities=27% Similarity=0.298 Sum_probs=18.9
Q ss_pred CCcHHHHHHHHHhCCCCceecccccc
Q 026632 98 PLGKELMEECAKNVPSATVIQGYGLT 123 (235)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~i~~~yG~t 123 (235)
.+..++.+++.+.||++.+.--+|++
T Consensus 8 AL~~EL~kRl~~~yPd~~v~Vr~~s~ 33 (65)
T PF06183_consen 8 ALESELTKRLHRQYPDAEVRVRPGSA 33 (65)
T ss_dssp HHHHHHHHHHHHH-SS-EEEEEEESS
T ss_pred HHHHHHHHHHHHHCCCceEeeeeccc
Confidence 45678889999999988877777755
Done!