Query 026632
Match_columns 235
No_of_seqs 117 out of 1657
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 18:15:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026632.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026632hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 3.4E-44 1.2E-48 310.5 22.1 228 8-235 218-448 (536)
2 3rix_A Luciferase, luciferin 4 100.0 1.5E-43 5.1E-48 307.3 22.0 224 9-235 230-453 (550)
3 2d1s_A Luciferase, luciferin 4 100.0 1.5E-43 5.2E-48 307.0 22.0 224 9-235 232-455 (548)
4 4fuq_A Malonyl COA synthetase; 100.0 6.7E-43 2.3E-47 300.2 17.8 224 7-235 190-413 (503)
5 1mdb_A 2,3-dihydroxybenzoate-A 100.0 2.5E-42 8.5E-47 298.9 14.7 225 8-235 218-444 (539)
6 3tsy_A Fusion protein 4-coumar 100.0 1.8E-41 6.2E-46 311.4 21.1 228 8-235 265-495 (979)
7 3etc_A AMP-binding protein; ad 100.0 3.4E-41 1.2E-45 294.0 20.3 222 8-235 261-489 (580)
8 1pg4_A Acetyl-COA synthetase; 100.0 4.3E-41 1.5E-45 297.0 19.9 228 7-235 292-531 (652)
9 3o83_A Peptide arylation enzym 100.0 4.5E-42 1.5E-46 297.6 12.4 226 7-235 226-453 (544)
10 3g7s_A Long-chain-fatty-acid-- 100.0 3.3E-41 1.1E-45 292.5 17.8 227 7-235 215-453 (549)
11 1v25_A Long-chain-fatty-acid-C 100.0 6.6E-41 2.2E-45 290.1 18.7 224 8-235 214-449 (541)
12 3c5e_A Acyl-coenzyme A synthet 100.0 1.1E-40 3.7E-45 290.3 19.9 222 8-235 242-470 (570)
13 3r44_A Fatty acyl COA syntheta 100.0 5.6E-41 1.9E-45 289.1 16.9 223 7-235 205-427 (517)
14 3fce_A D-alanine--poly(phospho 100.0 9.7E-41 3.3E-45 287.3 18.1 226 7-235 179-413 (512)
15 2v7b_A Benzoate-coenzyme A lig 100.0 1.6E-40 5.4E-45 287.0 18.5 223 8-235 220-443 (529)
16 3e7w_A D-alanine--poly(phospho 100.0 3.5E-40 1.2E-44 283.8 20.5 225 8-235 179-412 (511)
17 4gr5_A Non-ribosomal peptide s 100.0 2.4E-40 8.1E-45 288.3 19.6 223 8-235 249-483 (570)
18 1t5h_X 4-chlorobenzoyl COA lig 100.0 2.3E-40 7.8E-45 284.5 19.0 217 11-235 194-416 (504)
19 1ry2_A Acetyl-coenzyme A synth 100.0 1.6E-40 5.5E-45 293.7 17.1 229 7-235 298-540 (663)
20 4dg8_A PA1221; ANL superfamily 100.0 6.8E-40 2.3E-44 287.6 20.3 225 7-235 198-433 (620)
21 3nyq_A Malonyl-COA ligase; A/B 100.0 1.4E-40 4.9E-45 285.8 13.3 223 8-235 191-420 (505)
22 3l8c_A D-alanine--poly(phospho 100.0 4.9E-40 1.7E-44 283.5 16.6 226 8-235 183-417 (521)
23 3rg2_A Enterobactin synthase c 100.0 1.3E-39 4.5E-44 286.0 17.1 225 8-235 220-448 (617)
24 3ipl_A 2-succinylbenzoate--COA 100.0 6.1E-39 2.1E-43 275.4 17.8 214 8-235 199-412 (501)
25 3ivr_A Putative long-chain-fat 100.0 6.5E-39 2.2E-43 275.8 16.0 218 7-235 195-414 (509)
26 1amu_A GRSA, gramicidin synthe 100.0 9.9E-39 3.4E-43 277.6 17.1 217 8-235 218-444 (563)
27 3kxw_A Saframycin MX1 syntheta 100.0 6.3E-40 2.1E-44 286.6 9.1 226 7-235 202-472 (590)
28 3gqw_A Fatty acid AMP ligase; 100.0 2.2E-38 7.5E-43 276.1 15.5 225 8-235 213-475 (576)
29 3ite_A SIDN siderophore synthe 100.0 6.8E-38 2.3E-42 272.4 17.6 218 10-235 221-441 (562)
30 2vsq_A Surfactin synthetase su 100.0 6.8E-37 2.3E-41 287.6 18.7 224 7-235 641-875 (1304)
31 3t5a_A Long-chain-fatty-acid-- 100.0 1E-36 3.5E-41 260.1 13.8 204 13-219 230-480 (480)
32 3qov_A Phenylacetate-coenzyme 100.0 4.5E-35 1.5E-39 247.4 16.2 208 9-235 126-345 (436)
33 2y27_A Phenylacetate-coenzyme 100.0 3.8E-34 1.3E-38 241.7 15.8 209 8-235 129-347 (437)
34 2y4o_A Phenylacetate-coenzyme 100.0 6.4E-34 2.2E-38 240.8 15.8 209 8-235 131-349 (443)
35 4gs5_A Acyl-COA synthetase (AM 100.0 2E-33 6.7E-38 231.5 11.0 194 6-235 71-264 (358)
36 3hgu_A EHPF; phenazine, antibi 99.9 4.3E-27 1.5E-31 194.4 14.1 199 8-229 130-368 (369)
37 4eql_A 4-substituted benzoates 98.7 2.9E-08 1E-12 85.4 6.4 122 89-234 302-438 (581)
38 4b2g_A GH3-1 auxin conjugating 98.6 4E-08 1.4E-12 84.8 5.6 125 86-234 301-450 (609)
39 4epl_A Jasmonic acid-amido syn 98.5 1.6E-07 5.5E-12 80.7 6.9 125 86-234 301-445 (581)
40 3ezx_A MMCP 1, monomethylamine 76.6 20 0.0007 26.4 9.1 91 14-106 93-194 (215)
41 3g7s_A Long-chain-fatty-acid-- 47.4 77 0.0026 26.7 8.1 64 9-74 73-137 (549)
42 1v25_A Long-chain-fatty-acid-C 44.6 83 0.0028 26.4 7.8 64 9-74 68-132 (541)
43 1y80_A Predicted cobalamin bin 43.0 64 0.0022 23.4 6.1 88 15-104 90-186 (210)
44 2v7b_A Benzoate-coenzyme A lig 41.7 80 0.0027 26.4 7.3 62 9-72 69-131 (529)
45 3ni2_A 4-coumarate:COA ligase; 41.4 83 0.0028 26.4 7.4 62 9-72 70-132 (536)
46 3c5e_A Acyl-coenzyme A synthet 40.6 79 0.0027 26.8 7.1 64 9-74 95-159 (570)
47 3ivr_A Putative long-chain-fat 40.4 96 0.0033 25.7 7.6 64 9-74 52-116 (509)
48 3rix_A Luciferase, luciferin 4 39.8 76 0.0026 26.7 6.9 65 9-75 71-136 (550)
49 3r44_A Fatty acyl COA syntheta 36.5 1.2E+02 0.0041 25.2 7.6 61 9-71 64-125 (517)
50 2d1s_A Luciferase, luciferin 4 36.1 80 0.0027 26.6 6.4 62 9-72 73-135 (548)
51 1ry2_A Acetyl-coenzyme A synth 35.9 96 0.0033 27.0 7.0 60 8-69 134-194 (663)
52 4fuq_A Malonyl COA synthetase; 34.9 1.3E+02 0.0043 25.0 7.4 60 9-70 49-109 (503)
53 3ipl_A 2-succinylbenzoate--COA 32.4 1.4E+02 0.0047 24.7 7.2 56 12-69 47-103 (501)
54 1t5h_X 4-chlorobenzoyl COA lig 32.1 1.5E+02 0.0052 24.4 7.5 65 9-75 50-117 (504)
55 1amu_A GRSA, gramicidin synthe 32.0 1.6E+02 0.0053 25.0 7.6 63 9-73 85-148 (563)
56 1pg4_A Acetyl-COA synthetase; 31.7 1.2E+02 0.0041 26.2 6.9 59 9-69 128-187 (652)
57 2i2x_B MTAC, methyltransferase 30.1 1.1E+02 0.0036 23.2 5.6 86 14-103 124-218 (258)
58 3etc_A AMP-binding protein; ad 28.7 1.4E+02 0.0046 25.5 6.7 59 9-69 107-166 (580)
59 4gr5_A Non-ribosomal peptide s 27.9 1.8E+02 0.006 24.6 7.2 60 9-70 121-181 (570)
60 3t5a_A Long-chain-fatty-acid-- 25.7 1.3E+02 0.0046 24.4 6.0 65 11-77 80-148 (480)
61 3o83_A Peptide arylation enzym 25.6 1.7E+02 0.0057 24.6 6.6 59 9-69 76-135 (544)
62 3l8c_A D-alanine--poly(phospho 25.6 1.6E+02 0.0055 24.4 6.5 59 9-69 50-109 (521)
63 3kxw_A Saframycin MX1 syntheta 25.1 2.6E+02 0.0088 23.5 7.8 65 9-75 61-129 (590)
64 1mdb_A 2,3-dihydroxybenzoate-A 23.6 2E+02 0.0069 24.0 6.8 59 9-69 71-130 (539)
65 3fce_A D-alanine--poly(phospho 22.3 2.2E+02 0.0076 23.5 6.7 57 10-68 48-105 (512)
66 3gqw_A Fatty acid AMP ligase; 21.0 2.8E+02 0.0094 23.2 7.1 64 9-74 70-141 (576)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=3.4e-44 Score=310.45 Aligned_cols=228 Identities=44% Similarity=0.723 Sum_probs=209.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++++|++|.+|+...++.++..|+++++.+++++..+++.++++++|++.++|+++..+.+........++
T Consensus 218 ~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 297 (536)
T 3ni2_A 218 LYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLS 297 (536)
T ss_dssp SCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCT
T ss_pred ccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCc
Confidence 34567799999999999999977889999999999999999999999999999999999999999999998877777899
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceecccccccccccccccc---CCCCCCCCCcccccCCCcEEEEEeCCCCccC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMEN---SFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~---~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v 164 (235)
++|.+++||+++++++.+.+++.|+++++++.||+||++++++.+. ........+++|+|+++++++++|+++++++
T Consensus 298 ~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~ 377 (536)
T 3ni2_A 298 SLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASL 377 (536)
T ss_dssp TCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBC
T ss_pred cceEEEECCCCCCHHHHHHHHHHCCCCCccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCC
Confidence 9999999999999999999999998799999999999997665432 1222445678999999999999998899999
Q ss_pred CCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|+.|||+++||.++.||+++|+.+.+.|+.+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 378 ~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 448 (536)
T 3ni2_A 378 PRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAE 448 (536)
T ss_dssp CTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHH
T ss_pred CCCCccEEEEeCcccchhhcCChhHHHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHH
Confidence 99999999999999999999999999999988999999999999999999999999999999999999864
No 2
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=1.5e-43 Score=307.30 Aligned_cols=224 Identities=42% Similarity=0.684 Sum_probs=190.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
...++|++++++|++|.+|+ ..++.++..|+++++.+++++..+++.++++++|+++++|+++..+.+........+++
T Consensus 230 ~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 308 (550)
T 3rix_A 230 QIIPDTAILSVVPFHHGFGM-FTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSN 308 (550)
T ss_dssp CCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTT
T ss_pred cCCCCcEEEEechHHHHHHH-HHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCccc
Confidence 34567999999999999998 57788899999999999999999999999999999999999999999988777778999
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.+++||+++++++.+++.+.|+...+++.||+||+++++...+.. ....+++|+|+++++++++|++++++++.|+
T Consensus 309 lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~--~~~~~~vG~~~~~~~~~i~d~~~~~~~~~g~ 386 (550)
T 3rix_A 309 LHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEG--DDKPGAVGKVVPFFEAKVVDLDTGKTLGVNQ 386 (550)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTT--CCCTTEEEEECTTCEEEEECTTTCCBCCTTC
T ss_pred ccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceecCCCC--CCCCCCcccccCCcEEEEEeCCCCcCCCCCC
Confidence 99999999999999999999999855699999999999877765443 4566789999999999999988999999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+|+||.++.||+++|+.+.+.|+.+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 387 ~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 453 (550)
T 3rix_A 387 RGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAE 453 (550)
T ss_dssp CEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC------------------
T ss_pred CeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeCCceEEEEecchheeEECCEEECHHH
Confidence 9999999999999999999999999988999999999999999999999999999999999999975
No 3
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=1.5e-43 Score=307.05 Aligned_cols=224 Identities=39% Similarity=0.679 Sum_probs=204.4
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
...++|++++++|++|.+|+...++.++ .|+++++.+++++..+++.++++++|+++++|+++..|.+........+++
T Consensus 232 ~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~ 310 (548)
T 2d1s_A 232 QVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSN 310 (548)
T ss_dssp CCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTT
T ss_pred CCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccc
Confidence 4456799999999999999966677778 999999999999999999999999999999999999999887666667899
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.+++||+++++++.+++.+.|++.++++.||+||++.++...... ....+++|+|+++++++++|++++++++.|+
T Consensus 311 lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~ 388 (548)
T 2d1s_A 311 LVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIITPEG--DDKPGASGKVVPLFKAKVIDLDTKKSLGPNR 388 (548)
T ss_dssp CCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTT--CCCTTCCBEECTTCEEEEECTTTCCBCCTTC
T ss_pred eeEEEEcCccCCHHHHHHHHHHcCCCceeeccccccccceeeecCcc--cCCCCCCCccCCCceEEEEeCCcCccCCCCC
Confidence 99999999999999999999999778999999999999876653322 3456789999999999999987999999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++||.++.||+++|+.+.+.|+.+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 389 ~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~G~~v~p~e 455 (548)
T 2d1s_A 389 RGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAE 455 (548)
T ss_dssp CEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEEEEGGGCBCBTTCCBCHHH
T ss_pred CeEEEECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEEcCCCeEEEeccccceEEECCEEECHHH
Confidence 9999999999999999999999999988999999999999999999999999999999999999864
No 4
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=6.7e-43 Score=300.19 Aligned_cols=224 Identities=30% Similarity=0.458 Sum_probs=204.3
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+...++|++++++|++|.+|+...++.+++.|+++++.++++++.+++.++ ++|+++++|+++..+++........+
T Consensus 190 ~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~ 267 (503)
T 4fuq_A 190 YWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKETT 267 (503)
T ss_dssp HTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTT
T ss_pred HhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCccccch
Confidence 3456678999999999999998677888999999999999999999999998 79999999999999999887777778
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.||+++++++.+.+.+.++ .++++.||+||++.+..... ......+++|+|+++++++++|++++++++.
T Consensus 268 ~~lr~~~~gg~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~--~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~ 344 (503)
T 4fuq_A 268 GHMRLFISGSAPLLADTHREWSAKTG-HAVLERYGMTETNMNTSNPY--DGDRVPGAVGPALPGVSARVTDPETGKELPR 344 (503)
T ss_dssp TTCCEEEECSSCCCHHHHHHHHHHHS-CCEEECCEETTTEECBCCCS--SSCCCTTEEEEBCTTCEEEEECTTTCCBCCT
T ss_pred hhcEEEEECCCCCCHHHHHHHHHHhC-CCccceEcccccCcccccCC--CCCCcCCccccCCCCeEEEEEECCCCCCCcC
Confidence 99999999999999999999999986 89999999999987654322 2245567899999999999999889999999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||+|+||.++.||+++|+.+.+.|..+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 345 g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 413 (503)
T 4fuq_A 345 GDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDERGYVHILGRGKDLVITGGFNVYPKE 413 (503)
T ss_dssp TCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTTCEEEECCSSTTCEEETTEEECHHH
T ss_pred CCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCCCcEEEEecCCCEEEECCEEECHHH
Confidence 999999999999999999999999999988999999999999999999999999999999999999864
No 5
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=2.5e-42 Score=298.94 Aligned_cols=225 Identities=24% Similarity=0.338 Sum_probs=197.7
Q ss_pred ccCCCCcEEEEecChhHHHhHHH-HHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++++|++|.+++.. .++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++........+
T Consensus 218 ~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 297 (539)
T 1mdb_A 218 CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDL 297 (539)
T ss_dssp HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCC
T ss_pred hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCc
Confidence 34567799999999999999855 68999999999999999999999999999999999999999999988765556678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCC-cEEEEEeCCCCccCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPG-VEALIVSVDTQKPLP 165 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~-~~~~~~d~~~~~~v~ 165 (235)
+++|.+++||+++++++.+++.+.++ +++++.||+||++..... ..........++|+|+++ .+++++|+ ++++++
T Consensus 298 ~~lr~~~~gG~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~-~~~~~~~~~~~~G~p~~~~~~~~i~d~-~~~~~~ 374 (539)
T 1mdb_A 298 SSLQVLQVGGAKFSAEAARRVKAVFG-CTLQQVFGMAEGLVNYTR-LDDPEEIIVNTQGKPMSPYDESRVWDD-HDRDVK 374 (539)
T ss_dssp TTCCEEEEESSCCCHHHHTTHHHHTC-SEEEEEEECTTSCEEECC-TTSCHHHHHHCCCEESSTTCEEEEECT-TSCBCC
T ss_pred cceeEEEEcCCCCCHHHHHHHHHHhC-CcEEEEEcCCCCcccccC-CCCcHHhcCCCCCcccCCCceEEEECC-CCCCCc
Confidence 99999999999999999999999996 999999999996543322 111101223578999975 58999994 899999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++||.++.||+++|+.+.+.|..+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 375 ~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 444 (539)
T 1mdb_A 375 PGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEE 444 (539)
T ss_dssp TTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHH
T ss_pred CCCcceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEECCCCcEEEeccccceEEECCEEECHHH
Confidence 9999999999999999999999999999988999999999999999999999999999999999999864
No 6
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=1.8e-41 Score=311.36 Aligned_cols=228 Identities=45% Similarity=0.743 Sum_probs=197.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++++|++|.+++...++.++..|+++++.+++++..+++.++++++|++.++|+++..+.+........++
T Consensus 265 ~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~ 344 (979)
T 3tsy_A 265 LYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLS 344 (979)
T ss_dssp SCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCT
T ss_pred ccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCcc
Confidence 34567799999999999999977889999999999999999999999999999999999999999999998877777899
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceecccccccccccccccc---CCCCCCCCCcccccCCCcEEEEEeCCCCccC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMEN---SFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~---~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v 164 (235)
++|.+++||+++++++.+++.+.|+++++++.||+||++++++... ........+.+|+|+++++++++|+++++++
T Consensus 345 ~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~ 424 (979)
T 3tsy_A 345 SIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSL 424 (979)
T ss_dssp TCCEEEESSCCCCSSHHHHHHHHCTTCEEEECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBC
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHCCCCeEEeeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCC
Confidence 9999999999999999999999998899999999999997665432 1222345678999999999999998889999
Q ss_pred CCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|+.|||+|+||.++.||+++|+.+.+.|+.++||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 425 ~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~e 495 (979)
T 3tsy_A 425 SRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAE 495 (979)
T ss_dssp CTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEESCC-------------
T ss_pred CCCCccEEEEECCCccccccCChhhhhhhccCCCcEEcCCEEEEcCCceEEEecCCCCEEEECCEEECHHH
Confidence 99999999999999999999999999999988999999999999999999999999999999999999975
No 7
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=3.4e-41 Score=293.99 Aligned_cols=222 Identities=23% Similarity=0.310 Sum_probs=198.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc--cCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM--AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~--~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
....+++++++..|++|..+.+..++.++..|+++++. +.+++..+++.++++++|+++++|++++.|.+.. .....
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~ 339 (580)
T 3etc_A 261 QNVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKED-LSHYN 339 (580)
T ss_dssp SCCCTTCEEEECCCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSC-C---C
T ss_pred hCCCCCceEEEeCChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcc-cccCC
Confidence 44567799999999999999877788999999999988 4689999999999999999999999999998763 34457
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
++++|.+++||+++++++.+++.+.++ +++++.||+||++.++...+.. ..+.+++|+|+++++++++|+ ++++++
T Consensus 340 l~~lr~i~~gGe~l~~~~~~~~~~~~g-~~i~~~YG~TE~~~~~~~~~~~--~~~~~~~G~p~~~~~v~ivd~-~g~~~~ 415 (580)
T 3etc_A 340 FSTLKYAVVAGEPLNPEVFNRFLEFTG-IKLMEGFGQTETVVTIATFPWM--EPKPGSIGKPTPGYKIELMDR-DGRLCE 415 (580)
T ss_dssp CTTCCEEEECSSCCCHHHHHHHHHHHS-CCCEEEECCTTSSCCEECCTTS--CCCTTCCBEECTTCEEEEECT-TSCBCC
T ss_pred CccceEEEEccCCCCHHHHHHHHHHhC-CeEecccccccccceeecCCCC--CCCCCccccCCCCCEEEEECC-CCCCCC
Confidence 899999999999999999999999886 8999999999998766554333 456678999999999999995 799999
Q ss_pred CCCceEEEEEc-----CcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRG-----PNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~-----~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||++++ +.++.||+++|+.+.+.| .+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 416 ~g~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f-~~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~e 489 (580)
T 3etc_A 416 VGEEGEIVINTMEGKPVGLFVHYGKDPERTEETW-HDGYYHTGDMAWMDEDGYLWFVGRADDIIKTSGYKVGPFE 489 (580)
T ss_dssp TTCCEEEEEECTTCCCTTCCCEETTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEESSSCEEETTEEECHHH
T ss_pred CCCceEEEEecCCCCCCeeeccccCCHhHHHhhc-CCCEEecCcEEEECCCCcEEEEecCCCEEEECCEEECHHH
Confidence 99999999997 789999999999999999 6899999999999999999999999999999999999864
No 8
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=4.3e-41 Score=296.96 Aligned_cols=228 Identities=21% Similarity=0.283 Sum_probs=200.9
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL-- 80 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~-- 80 (235)
.+...++|++++.+|++|.+|+...++.+|..|+++++.+. +++..+++.++++++|+++++|++++.|.+...
T Consensus 292 ~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 371 (652)
T 1pg4_A 292 VFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKA 371 (652)
T ss_dssp HTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGG
T ss_pred hcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccc
Confidence 34566789999999999999997788999999999999874 589999999999999999999999999988654
Q ss_pred cCCCCCCCceEEEecccCCcHHHHHHHHHhCC--CCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeC
Q 026632 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP--SATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~--~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~ 158 (235)
....+++++|.++++|+++++++++++.+.++ ++++++.||+||+++++..........+.+++|+|+++++++++|+
T Consensus 372 ~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d~ 451 (652)
T 1pg4_A 372 IEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDN 451 (652)
T ss_dssp TTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECT
T ss_pred cccCCcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCcccccceecCCCCCcCccCCccccCcCCCeEEEECC
Confidence 23456899999999999999999999999886 3789999999999976665433222455678999999999999995
Q ss_pred CCCccCCCCCceEEEEEc--CcccccccCCccccccccc--CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 159 DTQKPLPPNQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 159 ~~~~~v~~g~~Gel~v~~--~~~~~~y~~~~~~~~~~~~--~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+|++++.|+.|||++++ |.++.||+++++.+.+.+. .+|||+|||+|++|++|++++.||+||+||++|++|+|.
T Consensus 452 -~g~~v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~ 530 (652)
T 1pg4_A 452 -EGHPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTA 530 (652)
T ss_dssp -TCCBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHH
T ss_pred -CCCCcCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEcCCCcEEEEecCCCEEEECCEEECHH
Confidence 79999999999999999 7899999999998877763 378999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 531 e 531 (652)
T 1pg4_A 531 E 531 (652)
T ss_dssp H
T ss_pred H
Confidence 4
No 9
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=4.5e-42 Score=297.64 Aligned_cols=226 Identities=24% Similarity=0.358 Sum_probs=187.8
Q ss_pred eccCCCCcEEEEecChhHHHhHHH-HHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
.+...++|++++++|++|.+++.. .++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++........
T Consensus 226 ~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~ 305 (544)
T 3o83_A 226 ICGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQ 305 (544)
T ss_dssp HTTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHH
T ss_pred HhCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhcccc
Confidence 345667899999999999999854 5889999999999999999999999999999999999999999999876655567
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccC-CCcEEEEEeCCCCccC
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQKPL 164 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~d~~~~~~v 164 (235)
++++|.+++||+++++++.+++.+.++ +++++.||+||++......... ......++|+|+ ++.+++++| ++++++
T Consensus 306 ~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~~i~d-~~~~~~ 382 (544)
T 3o83_A 306 IQSLKLLQVGGASFPESLARQVPEVLN-CKLQQVFGMAEGLVNYTRLDDS-DEQIFTTQGRPISSDDEIKIVD-EQYREV 382 (544)
T ss_dssp HTTCCEEEEESSCCCHHHHTHHHHHHC-SEEEEEEECTTSCEEECCTTSC-HHHHHHCCCEESCTTCEEEEEC-TTSCBC
T ss_pred CCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEeeeccccccceeecCCCc-hhhccCCCceecCCCcEEEEEC-CCCCCC
Confidence 889999999999999999999999885 9999999999998544432111 112235689996 899999999 589999
Q ss_pred CCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 165 PPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++|+.|||+++||.++.||+++|+.+.+.|+.+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 383 ~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 453 (544)
T 3o83_A 383 PEGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQRTPDGNLRVVGRIKDQINRGGEKIASEE 453 (544)
T ss_dssp CTTCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEECTTSCEEEEEEEC--------------
T ss_pred CCCCeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCEEEEcCCCCEEEEeecCCEEEeCCEEECHHH
Confidence 99999999999999999999999999999988999999999999999999999999999999999999975
No 10
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=3.3e-41 Score=292.50 Aligned_cols=227 Identities=29% Similarity=0.471 Sum_probs=189.9
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC--C
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK--F 84 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~--~ 84 (235)
.+...++|++++++|++|.+++. .++.++..|+++++.+.+++..+++.++++++|+++++|+++..|.+...... .
T Consensus 215 ~~~~~~~d~~~~~~p~~~~~~~~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 293 (549)
T 3g7s_A 215 ATGLSHMDTIVGCMPMFHSAEFG-LVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTY 293 (549)
T ss_dssp HHCCCTTCEEECCSCTTSHHHHH-HHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCC
T ss_pred HcCCCCCCEEEEeCcHHHHHHHH-HHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccC
Confidence 34456779999999999999995 48889999999999999999999999999999999999999999988654433 5
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHh----CCC--CceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKN----VPS--ATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSV 158 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~----~~~--~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~ 158 (235)
.++++|.++.||+++++++.+.+.+. +++ +++++.||+||++.++....... ......+|+|+++++++++|+
T Consensus 294 ~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~i~d~ 372 (549)
T 3g7s_A 294 DWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLR-LDKSTTQGVPMSDIELKVISL 372 (549)
T ss_dssp CCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGGG-GGGTTSCCEECTTCEEEEECS
T ss_pred CccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEeccccchhhhcCCccc-cCcCCCccccCCCCEEEEEeC
Confidence 68899999999999999999999987 643 88999999999998776543321 234567899999999999998
Q ss_pred CCCccCCCCCceEEEEEcCcccccccCCccccccccc--CCC--eEecCceEEEcCCCcEEEEeccCCceEeccEEeecC
Q 026632 159 DTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID--KKG--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSN 234 (235)
Q Consensus 159 ~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~--~~g--~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~ 234 (235)
+++++++.|+.|||+|+||.++.||+++|+.+.+.|. .+| ||+|||+|+++++|.+++.||+||+||++|++|+|.
T Consensus 373 ~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~ 452 (549)
T 3g7s_A 373 EDGRELGVGESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAPF 452 (549)
T ss_dssp SSCCEECTTCCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEEEECTTSCEEEEEEC------------CH
T ss_pred CCCcCCCCCCceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECHH
Confidence 8999999999999999999999999999999998884 567 999999999999999999999999999999999986
Q ss_pred C
Q 026632 235 W 235 (235)
Q Consensus 235 ~ 235 (235)
|
T Consensus 453 e 453 (549)
T 3g7s_A 453 E 453 (549)
T ss_dssp H
T ss_pred H
Confidence 4
No 11
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=6.6e-41 Score=290.15 Aligned_cols=224 Identities=29% Similarity=0.406 Sum_probs=195.1
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++++|++|.+++ ..++.++..|+++++.+. +++..+++.++++++|+++++|+++..|.+........+
T Consensus 214 ~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l 292 (541)
T 1v25_A 214 TALSEKDVVLPVVPMFHVNAW-CLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRL 292 (541)
T ss_dssp TCCCTTCEEEECSCTTSHHHH-THHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCC
T ss_pred ccCCCCCEEEEeccchhhhHH-HHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcc
Confidence 344677999999999999998 567788999999999864 699999999999999999999999999988765555578
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCC---------CCCCCcccccCCCcEEEEEe
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAG---------SRNIGSAGALAPGVEALIVS 157 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~---------~~~~~~~g~p~~~~~~~~~d 157 (235)
+++|.+++||+++++++.+.+ +.++ +++++.||+||++++++....... .....++|+|+++++++++|
T Consensus 293 ~~lr~i~~gG~~l~~~~~~~~-~~~g-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d 370 (541)
T 1v25_A 293 KTLRRLVVGGSAAPRSLIARF-ERMG-VEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVAD 370 (541)
T ss_dssp SSCCEEEECSSCCCHHHHHHH-HHTT-CEEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEEC
T ss_pred hhccEEEECCCCCCHHHHHHH-HHhC-CceeecccccccccceecccccccccccCccccccccCCCCCcCCCcEEEEEC
Confidence 899999999999999999999 6675 999999999999987665432100 01235789999999999999
Q ss_pred CCCCccCCC--CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 158 VDTQKPLPP--NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 158 ~~~~~~v~~--g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+ ++++++. ++.|||+++||.++.||+++|+.+.+.|..+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 371 ~-~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~dG~l~~~GR~~d~ik~~G~~v~p~e 449 (541)
T 1v25_A 371 E-EGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVD 449 (541)
T ss_dssp T-TSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHHH
T ss_pred C-CCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCEEEEcCCceEEEeecccceeeeCCEEECHHH
Confidence 5 7888884 368999999999999999999999999977999999999999999999999999999999999999864
No 12
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=1.1e-40 Score=290.31 Aligned_cols=222 Identities=19% Similarity=0.300 Sum_probs=198.6
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
+...++|++++++|++|.+++...++.++..|+++++.+ .+++..+++.++++++|+++++|+++..+.+.. .....
T Consensus 242 ~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-~~~~~ 320 (570)
T 3c5e_A 242 TGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQD-LSSYK 320 (570)
T ss_dssp TSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSC-TTTCC
T ss_pred cCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhcc-ccccc
Confidence 345677999999999999999667899999999999986 689999999999999999999999999998763 33446
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
++++|.+++||+++++++.+.+.+.++ +++++.||+||++.++...... ....+++|+|+++++++++|+ ++++++
T Consensus 321 ~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~i~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~v~i~d~-~g~~~~ 396 (570)
T 3c5e_A 321 FPHLQNCVTVGESLLPETLENWRAQTG-LDIRESYGQTETGLTCMVSKTM--KIKPGYMGTAASCYDVQIIDD-KGNVLP 396 (570)
T ss_dssp CTTCCEEEEESSCCCHHHHHHHHHHHS-CCCEEEEEETTTEEEEECCTTS--CCCTTCCCEECTTCCEEEECT-TSCBCC
T ss_pred cccceEEEEcCCcCCHHHHHHHHHHhC-CchhhccchhhcccceecCccc--ccCCCcccccCCCceEEEECC-CCCCCC
Confidence 789999999999999999999999885 8999999999999765543322 345678999999999999995 799999
Q ss_pred CCCceEEEEE-----cCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLR-----GPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~-----~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++ +|.++.||+++|+.+.+.| .++||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 397 ~G~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f-~~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~V~p~e 470 (570)
T 3c5e_A 397 PGTEGDIGIRVKPIRPIGIFSGYVDNPDKTAANI-RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSE 470 (570)
T ss_dssp TTCCEEEEEECSSBCCTTCCCEETTCHHHHHHTE-ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHH
T ss_pred CCCCCeeEEeccCCCCchhhccccCChhHhhhhh-cCCccccceeEEEcCCceEEEEecCCCEEEECCEEECHHH
Confidence 9999999999 9999999999999999988 6899999999999999999999999999999999999864
No 13
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=5.6e-41 Score=289.14 Aligned_cols=223 Identities=27% Similarity=0.410 Sum_probs=199.1
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+...++|++++++|++|.+++...++.++ .|+++++.+.+++..+++.++++++|++.++|+++..+.+........+
T Consensus 205 ~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 283 (517)
T 3r44_A 205 TIDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDA 283 (517)
T ss_dssp HSCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCC
T ss_pred hcCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCC
Confidence 345567799999999999999955455555 9999999999999999999999999999999999999998776666678
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.+++||+++++++.+.+.+. ++++++.||+||+++.+............+++|+|.++.+++++|+ ++++++.
T Consensus 284 ~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~~~~~ 360 (517)
T 3r44_A 284 PDFRYFITGGAPMPEALIKIYAAK--NIEVVQGYALTESCGGGTLLLSEDALRKAGSAGRATMFTDVAVRGD-DGVIREH 360 (517)
T ss_dssp TTCCEEEECSSCCCHHHHHHHHHT--TCEEEEEEECGGGTTCEEEECGGGTTTTTTCCBEECTTEEEEEECT-TSCEESS
T ss_pred CcccEEEECCCCCCHHHHHHHHhc--CCcEEEeecccccccceeecCCccccccCCCCCcCCCCeEEEEECC-CCCCCCC
Confidence 999999999999999999999887 5999999999999887665443333455678999999999999995 7889998
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
| .|||+++||.++.||+++|+.+.+.| .+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 361 g-~GEl~v~g~~v~~GY~~~p~~t~~~f-~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 427 (517)
T 3r44_A 361 G-EGEVVIKSDILLKEYWNRPEATRDAF-DNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAE 427 (517)
T ss_dssp E-EEEEEEEETTSCSEETTCHHHHHHTE-ETTEEEEEEEEEECTTSCEEEEECGGGCEEETTEEECHHH
T ss_pred C-CeEEEEeCcchhhhhCCChhhhHhhh-cCCCEecceeEEEcCCeeEEEecCCcCEEEECCEEECHHH
Confidence 9 89999999999999999999999999 7899999999999999999999999999999999999864
No 14
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=9.7e-41 Score=287.33 Aligned_cols=226 Identities=20% Similarity=0.250 Sum_probs=201.3
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|++++++|++|.+++ ..++.+++.|+++++.+. +++..+++.++++++|++.++|+++..+++......
T Consensus 179 ~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~ 257 (512)
T 3fce_A 179 DFNLQTGQVFLNQAPFSFDLSV-MDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSE 257 (512)
T ss_dssp HTTCCSSCEEEECSCTTSGGGH-HHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCST
T ss_pred hcCCCCCCEEEEeCCccHhHHH-HHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccc
Confidence 3455678999999999999998 678999999999999876 689999999999999999999999999988877777
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC---CCCCCCcccccCCCcEEEEEeCCC
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDT 160 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~d~~~ 160 (235)
..++++|.++++|+++++++.+++.+.|+++++++.||+||++.++....... .......+|+|.++++++++| ++
T Consensus 258 ~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~ 336 (512)
T 3fce_A 258 SMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMK-ED 336 (512)
T ss_dssp TTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEECCHHHHHHCSSCCCEEECTTCEEEEEC-SS
T ss_pred hhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhheeeEEeccccccccCCCccccccCCcEEEEEC-CC
Confidence 78899999999999999999999999998799999999999998766433211 012345789999999999999 58
Q ss_pred CccCCCCCceEEEEEcCcccccccCCcccccccc---cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 161 QKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 161 ~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~---~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++++|+.|||+++||.++.||+++|+.+.+.| +.++||+|||+|++ ++|++++.||+||+||++|++|+|+|
T Consensus 337 g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~-~dG~l~i~GR~~d~ik~~G~~v~p~e 413 (512)
T 3fce_A 337 GTIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYV-ENGLLFYNGRLDFQIKLHGYRMELEE 413 (512)
T ss_dssp SCBCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEE-ETTEEEEEEEGGGCEEETTEEECHHH
T ss_pred CCCCCCCCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEe-cCCEEEEecccCCEEEECCEEECHHH
Confidence 9999999999999999999999999999999887 34679999999999 79999999999999999999999864
No 15
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=1.6e-40 Score=287.04 Aligned_cols=223 Identities=21% Similarity=0.321 Sum_probs=193.5
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEc-cCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILM-AKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
+...++|++++++|++|.+|+...++.++..|+++++. +.+++..+++.++++++|+++++|+++..+++.........
T Consensus 220 ~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 299 (529)
T 2v7b_A 220 LGIAENDVVFSAAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARAD 299 (529)
T ss_dssp CCCCTTCEEEESSCTTSHHHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGG
T ss_pred cCCCCCcEEEEeecHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccccC
Confidence 44567799999999999999977788899999999987 56899999999999999999999999999987654433212
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
.++|.+++||+++++++.+.+.+.++ +++++.||+||++.+....... ....+++|+|+++++++++| ++++++++
T Consensus 300 ~~lr~~~~gGe~l~~~~~~~~~~~~g-~~i~~~YG~TE~~~~~~~~~~~--~~~~~~~G~p~~~~~~~i~d-~~g~~~~~ 375 (529)
T 2v7b_A 300 VAIRICTSAGEALPREIGERFTAHFG-CEILDGIGSTEMLHIFLSNRAG--AVEYGTTGRPVPGYEIELRD-EAGHAVPD 375 (529)
T ss_dssp CCCCEEEECSSCCCHHHHHHHHHHHS-CCEEEEEECTTTSSEEEECCTT--CCCTTSCCEECTTCEEEEEC-TTSCBCCT
T ss_pred CceEEEEEcCCCCCHHHHHHHHHHhC-CceeeeEchhhcCceeeccccC--CCccCCcccCCCCCEEEEEC-CCCCCCCC
Confidence 48999999999999999999999885 9999999999997765544322 34557899999999999999 48999999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|+.|||+++||.++.||+++++.+.+.| .++||+|||+++++++|++++.||+||+||++|++|+|.|
T Consensus 376 g~~GEl~v~g~~~~~gY~~~~~~t~~~f-~~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~e 443 (529)
T 2v7b_A 376 GEVGDLYIKGPSAAVMYWNNREKSRATF-LGEWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVE 443 (529)
T ss_dssp TSCEEEEEECTTCCCCBTTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEEGGGCBC----CBCHHH
T ss_pred CCccEEEEecCCcccccCCChHHHHHhh-hcCCcccCceEEECCCccEEEeCccCCeEEECCEEECHHH
Confidence 9999999999999999999999999888 5899999999999999999999999999999999999853
No 16
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=3.5e-40 Score=283.82 Aligned_cols=225 Identities=20% Similarity=0.272 Sum_probs=199.0
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
+...++|++++++|++|..++ ..++.++..|+++++.+. +++..+++.++++++|++.++|+++..+++.......
T Consensus 179 ~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 257 (511)
T 3e7w_A 179 FPVSGGKIFLNQAPFSFDLSV-MDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQD 257 (511)
T ss_dssp STTTTTCEEEECSCTTSTHHH-HHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTT
T ss_pred cCCCccceEEEeCCccHHHHH-HHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccc
Confidence 445677999999999999998 678999999999999875 6899999999999999999999999999988776777
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC---CCCCCCcccccCCCcEEEEEeCCCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
.++++|.++.+|+++++++.+.+.+.|+++++++.||+||++.+++...... .......+|+|.++++++++|+ ++
T Consensus 258 ~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~g 336 (511)
T 3e7w_A 258 LLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAVTSVEITNDVISRSESLPVGFAKPDMNIFIMDE-EG 336 (511)
T ss_dssp TCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCSEEEEECHHHHTTCSSCCCBEECTTCEEEEECT-TS
T ss_pred cCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeeeeEEeccccccccCCcCCCcceeCCCEEEEECC-CC
Confidence 7899999999999999999999999998799999999999998766432111 1233456899999999999995 79
Q ss_pred ccCCCCCceEEEEEcCcccccccCCccccccccc-CCC--eEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-KKG--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-~~g--~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++.|+.|||+++||.++.||+++|+.+.+.|. .+| ||+|||+|++ ++|++++.||+||+||++|++|+|+|
T Consensus 337 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~-~dG~l~~~GR~~d~ik~~G~~v~p~e 412 (511)
T 3e7w_A 337 QPLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFI-QDGQIFCQGRLDFQIKLHGYRMELEE 412 (511)
T ss_dssp CBCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEE-ETTEEEEEEESSSEEEETTEEEEHHH
T ss_pred CCCCCCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEc-cCCeEEEEccccCEEEECCEEeCHHH
Confidence 9999999999999999999999999999998883 233 7999999999 68999999999999999999999864
No 17
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=2.4e-40 Score=288.28 Aligned_cols=223 Identities=23% Similarity=0.271 Sum_probs=180.6
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
....++|++++++|++|..+. ..++.++..|+++++.+ .+++..+++.++++++|++.++|+++..|.+... ..
T Consensus 249 ~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~---~~ 324 (570)
T 4gr5_A 249 AGFGPDEVFLQCSPVSWDAFG-LELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVP---EA 324 (570)
T ss_dssp SCCSTTCEEEECSCTTSSTHH-HHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG---GG
T ss_pred cCCCCCCEEEEecCccHHHHH-HHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch---hh
Confidence 345667999999999997766 57888999999999986 4689999999999999999999999999987643 24
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC--CCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA--GSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~--~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
++++|.+++||+++++++.+.+.+.++++++++.||+||++++........ .......+|+|+++++++++|+ ++++
T Consensus 325 ~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~-~~~~ 403 (570)
T 4gr5_A 325 FEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTTHHAVVAGDLSGTALPIGVPLAGKRAYVLDD-DLKP 403 (570)
T ss_dssp GTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCGGGTTSSSCCCBEECTTEEEEEECT-TSCB
T ss_pred CCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeeeeeeecccccCCCccccceeeCCCEEEEECC-CCCC
Confidence 789999999999999999999999998899999999999988766433221 1233456899999999999994 7999
Q ss_pred CCCCCceEEEEEcCcccccccCCcccccccccC--------CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK--------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~--------~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|+.|||+|+||.++.||+++|+.+.+.|.. ++||+|||+|++|++|++++.||+||+||++|++|+|.|
T Consensus 404 ~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG~l~~~GR~~d~Ik~~G~~v~p~e 483 (570)
T 4gr5_A 404 AANGALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDLARRRADGVLEYVGRADDQVKIRGFRVEPGE 483 (570)
T ss_dssp CCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEECTTSCEEEEEC----------------
T ss_pred CCCCCcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCeEEECCCCeEEEEcccCCEEEECcEEeCHHH
Confidence 999999999999999999999999999988843 379999999999999999999999999999999999975
No 18
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=2.3e-40 Score=284.52 Aligned_cols=217 Identities=22% Similarity=0.358 Sum_probs=194.7
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--cCCCCCCC
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL--VKKFDLSS 88 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~--~~~~~l~~ 88 (235)
.++|++++.+|++|.+|+...++.++..|+++++.+.+++..+++.++++++|+++++|+++..|.+... .....+++
T Consensus 194 ~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~ 273 (504)
T 1t5h_X 194 GRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDS 273 (504)
T ss_dssp STTCEEEECSCTTSHHHHTTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTT
T ss_pred CCCceEEeecchhhcchHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCcc
Confidence 5679999999999999986778999999999999999999999999999999999999999999987652 23446889
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCC---ccCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQ---KPLP 165 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~---~~v~ 165 (235)
+|.+++||+++++++.+.+.+.++ .++++.||+||++.... .+ ....+..|.|.++++++++|+ ++ ++++
T Consensus 274 lr~~~~gG~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~-~~----~~~~~~~g~p~~~~~~~i~~~-~~~~~~~~~ 346 (504)
T 1t5h_X 274 LRHVTFAGATMPDAVLETVHQHLP-GEKVNIYGTTEAMNSLY-MR----QPKTGTEMAPGFFSEVRIVRI-GGGVDEIVA 346 (504)
T ss_dssp CCEEEECCTTCCHHHHHHHHHHCC-SEEEEEEEETTTEEEEE-EE----SCSSSSEEBCCTTCCEEEECT-TSCTTCBCC
T ss_pred ccEEEEcCCcCCHHHHHHHHHhcC-cceeeeecccccccccc-cc----CCCCCccccCCCCCceeEEec-cCCCCCcCC
Confidence 999999999999999999999997 89999999999943222 22 234567899999999999996 45 8999
Q ss_pred CCCceEEEEE-cCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLR-GPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~-~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|+.|||+++ +|.++.||+++|+.+.+.| .+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 347 ~g~~GEl~v~gg~~~~~GY~~~~~~t~~~f-~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 416 (504)
T 1t5h_X 347 NGEEGELIVAASDSAFVGYLNQPQATAEKL-QDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSE 416 (504)
T ss_dssp TTCCEEEEEECCTTSCCCBTTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHH
T ss_pred CCCcceEEEeCCceeeceecCCchhhhhhh-cCCccccCcEEEECCCceEEEeCcccCEEEECCEEECHHH
Confidence 9999999999 8999999999999999998 7899999999999999999999999999999999999864
No 19
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=1.6e-40 Score=293.66 Aligned_cols=229 Identities=20% Similarity=0.325 Sum_probs=201.0
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCC--
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGL-- 80 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~-- 80 (235)
.+...++|++++.+|++|..|+...++.+|..|+++++.+. +++..+++.|+++++|+++++|++++.|.+...
T Consensus 298 ~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~ 377 (663)
T 1ry2_A 298 TFDTHQEDVFFTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSY 377 (663)
T ss_dssp HSCCCSSCEEEECSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTS
T ss_pred hcCCCCCcEEEEcCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccc
Confidence 34566789999999999999997788899999999999864 589999999999999999999999999988654
Q ss_pred cCCCCCCCceEEEecccCCcHHHHHHHHHhCC--CCceeccccccccccccccccC-CCCCCCCCcccccCCCcEEEEEe
Q 026632 81 VKKFDLSSLKLVGSGAAPLGKELMEECAKNVP--SATVIQGYGLTETSGIATMENS-FAGSRNIGSAGALAPGVEALIVS 157 (235)
Q Consensus 81 ~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~--~~~i~~~yG~tE~g~~~~~~~~-~~~~~~~~~~g~p~~~~~~~~~d 157 (235)
....+++++|.++++|+++++++++++.+.++ ++++++.||+||++.++..... .....+.+++|.|+++++++++|
T Consensus 378 ~~~~~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d 457 (663)
T 1ry2_A 378 IENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLD 457 (663)
T ss_dssp SSSCCCTTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEEC
T ss_pred cccCCcCceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEEeECCccccCeeeccCCCCCcccCCCccccCcCCCeEEEEc
Confidence 23457899999999999999999999999886 3889999999999976665432 22245668899999999999999
Q ss_pred CCCCccCCC-CCceEEEEEc--CcccccccCCccccccccc--CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEee
Q 026632 158 VDTQKPLPP-NQLGEIWLRG--PNMMRGYYNNEQATKLTID--KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVT 232 (235)
Q Consensus 158 ~~~~~~v~~-g~~Gel~v~~--~~~~~~y~~~~~~~~~~~~--~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~ 232 (235)
+++|++++. |+.|||++++ |.++.||+++++.+.+.+. .+|||+|||+|+++++|++++.||+||+||++|++|+
T Consensus 458 ~~~g~~v~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~ 537 (663)
T 1ry2_A 458 PNTGEELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLS 537 (663)
T ss_dssp SSSTTCEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBC
T ss_pred CCCCCcCCCCCcceEEEEecCCCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEcCCCCEEEEeecCCEEEECCEEcC
Confidence 768999988 9999999999 5899999999998887764 3789999999999999999999999999999999999
Q ss_pred cCC
Q 026632 233 SNW 235 (235)
Q Consensus 233 p~~ 235 (235)
|.|
T Consensus 538 ~~e 540 (663)
T 1ry2_A 538 TAE 540 (663)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 20
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=6.8e-40 Score=287.59 Aligned_cols=225 Identities=21% Similarity=0.283 Sum_probs=195.7
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc--CCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA--KFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~--~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
.+...++|++++++|++|..++ ..++.++..|+++++.+ .+++..+++.++++++|++.++|+++..+.+.. ..
T Consensus 198 ~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~ 273 (620)
T 4dg8_A 198 FLAFAPQMRFLVNSPLSFDAAT-LEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD---PD 273 (620)
T ss_dssp GGTTCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---GG
T ss_pred hhCCCCCCEEEEECccCHHHHH-HHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---hh
Confidence 3455677999999999999998 67899999999999964 579999999999999999999999999998753 23
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC--CCCCCCcccccCCCcEEEEEeCCCCc
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA--GSRNIGSAGALAPGVEALIVSVDTQK 162 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~--~~~~~~~~g~p~~~~~~~~~d~~~~~ 162 (235)
.++++|.+++||++++++..+.+.+.+++++++|.||+||++.+++...... .......+|+|+++++++++|++...
T Consensus 274 ~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~ 353 (620)
T 4dg8_A 274 CLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLDEHGQE 353 (620)
T ss_dssp GGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCTGGGGSSSCCCBEECTTEEEEEECTTSCB
T ss_pred hCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheEEEeccccccCCCCCCceecccCcEEEEECccCCC
Confidence 5789999999999999999999988887799999999999998765432221 12345679999999999999964444
Q ss_pred cCCCCCceEEEEEcCcccccccCCcccccccccCC-------CeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 163 PLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKK-------GWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 163 ~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~-------g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+++.|+.|||+|+||.++.||+++|+.+.+.|..+ +||+|||+|+++++|.+++.||+||+||++|++|+|.|
T Consensus 354 ~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~dd~Ik~~G~ri~~~e 433 (620)
T 4dg8_A 354 IAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPA 433 (620)
T ss_dssp CCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECTTSCEEEEECSSSEEEETTEEEEHHH
T ss_pred CCCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEECCCCeEEEEccCCCEEEECCEEcCHHH
Confidence 48999999999999999999999999999988442 79999999999999999999999999999999999864
No 21
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=1.4e-40 Score=285.81 Aligned_cols=223 Identities=30% Similarity=0.438 Sum_probs=193.6
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcC---CC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK---KF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~---~~ 84 (235)
+...++|++++.+|++|..|+...++.++..|+++++.+++++..+++.+ ++++|+++++|+++..+.+..... ..
T Consensus 191 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 269 (505)
T 3nyq_A 191 WQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPELAK 269 (505)
T ss_dssp HTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHH
T ss_pred hCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhc
Confidence 45567799999999999999977889999999999999999999999999 789999999999999998743322 23
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPL 164 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v 164 (235)
.++++|.++.||+++++++.+++.+.++ +++++.||+||++.++...... ......+|+|+++++++++|+ +++++
T Consensus 270 ~l~~lr~i~~gg~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~~~~~~i~d~-~g~~~ 345 (505)
T 3nyq_A 270 ALAGARLLVSGSAALPVHDHERIAAATG-RRVIERYGMTETLMNTSVRADG--EPRAGTVGVPLPGVELRLVEE-DGTPI 345 (505)
T ss_dssp HHHHCSEEEECSSCCCHHHHHHHHHHHS-CCCEEEEEETTTEEEEECCTTS--CCCTTCCCEECTTCEEEEC------CC
T ss_pred ccccceEEEECCCCCCHHHHHHHHHhcC-CeeecccchhhcccccccCCCC--CCCCCCcccCCCCCEEEEECC-CCCCc
Confidence 4678999999999999999999999886 8999999999998766543322 455678999999999999995 78888
Q ss_pred CC---CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEecc-CCceEeccEEeecCC
Q 026632 165 PP---NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI-KELIKYKGFQVTSNW 235 (235)
Q Consensus 165 ~~---g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~-~d~i~~~G~~v~p~~ 235 (235)
+. |+.|||+++||.++.||+++|+.+.+.|..++||+|||+|+++++|++++.||+ ||+||++|++|+|.|
T Consensus 346 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~dG~l~~~GR~~d~~ik~~G~~v~~~e 420 (505)
T 3nyq_A 346 AALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGE 420 (505)
T ss_dssp CCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEECTTSCEEEEEESSCCCEEETTEEECHHH
T ss_pred ccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEECCCccEEEeCCccCceEEeCCEEECHHH
Confidence 76 899999999999999999999999999988999999999999999999999997 599999999999864
No 22
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=4.9e-40 Score=283.48 Aligned_cols=226 Identities=20% Similarity=0.233 Sum_probs=195.4
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCC---CHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF---DLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~---~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
+...+++++++..|++|..++ ..++.++..|+++++.+.. ++..+++.+.++++|++.++|+++..+.........
T Consensus 183 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 261 (521)
T 3l8c_A 183 FDVPKQPQMLAQPPYSFDLSV-MYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQA 261 (521)
T ss_dssp TCCCSSCEEECCSCTTSGGGH-HHHHHHHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTT
T ss_pred cCCCCCCeEEecCCccHHHHH-HHHHHHHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccc
Confidence 445667999999999999988 6788999999999998764 899999999999999999999999999887766667
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC---CCCCCCcccccCCCcEEEEEeCCCC
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA---GSRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~---~~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
.++++|.++++|+++++++.+.+.+.|+++++++.||+||++.+++...... ......++|+|.++++++++|+ ++
T Consensus 262 ~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~-~g 340 (521)
T 3l8c_A 262 KMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIIDE-DG 340 (521)
T ss_dssp TCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEECT-TS
T ss_pred cCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhhhhceeecccccccCCCccccccccCCCEEEEECC-Cc
Confidence 7899999999999999999999999998799999999999998765432211 0123457999999999999995 79
Q ss_pred ccCCCCCceEEEEEcCcccccccCCcccccccc---cCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTI---DKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~---~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++.|+.|||+++||.++.||+++|+.+.+.| +.++||+|||+|+++++|++++.||+||+||++|++|+|+|
T Consensus 341 ~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~e 417 (521)
T 3l8c_A 341 KELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELED 417 (521)
T ss_dssp CBCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECSSSCEEEEEEGGGBCC-----CBHHH
T ss_pred CCCCCCCceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHH
Confidence 999999999999999999999999999999887 45789999999999999999999999999999999999864
No 23
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=1.3e-39 Score=285.98 Aligned_cols=225 Identities=25% Similarity=0.393 Sum_probs=196.8
Q ss_pred ccCCCCcEEEEecChhHHHhHHH-HHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcC--CC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAV-ITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVK--KF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~-~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~--~~ 84 (235)
+...++|++++++|++|.+++.. .++.++..|+++++.+..++..+++.++++++|++.++|+++..+.+..... ..
T Consensus 220 ~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 299 (617)
T 3rg2_A 220 CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRA 299 (617)
T ss_dssp HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTT
T ss_pred cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccc
Confidence 45567899999999999998854 5889999999999999889999999999999999999999999888754332 23
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccC-CCcEEEEEeCCCCcc
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALA-PGVEALIVSVDTQKP 163 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~-~~~~~~~~d~~~~~~ 163 (235)
.++++|.+++||+++++++.+.+.+.++ ++++|.||+||++......... ........|.|. ++.++.++| +++++
T Consensus 300 ~l~~lr~i~~gGe~l~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~~i~d-~~~~~ 376 (617)
T 3rg2_A 300 QLASLKLLQVGGARLSATLAARIPAEIG-CQLQQVFGMAEGLVNYTRLDDS-AEKIIHTQGYPMCPDDEVWVAD-AEGNP 376 (617)
T ss_dssp TTTTCCEEEEESSCCCHHHHHHHHHHTC-SEEEEEEEETTEEEEECCTTSC-HHHHHHCCCEESCTTCEEEEEC-TTSCB
T ss_pred cCCCccEEEEcCCcCCHHHHHHHHHHhC-CcEEEEeccCcceeecccCCCc-ccccccCCCccCCCCceEEEEC-CCCCC
Confidence 6889999999999999999999999986 9999999999998654432111 112224678887 788999999 48999
Q ss_pred CCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|+.|||+|+||.++.||+++|+.+.+.|..++||+|||+|+++++|.+++.||+||+||++|++|+|.|
T Consensus 377 ~p~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~e 448 (617)
T 3rg2_A 377 LPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEE 448 (617)
T ss_dssp CCTTCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSSEEEETTEEEEHHH
T ss_pred CCCCCceEEEecCccccchhcCChhhhhhccCCCCceecCceEEEcCCceEEEEeecCCEEEECCEEeCHHH
Confidence 999999999999999999999999999999988999999999999999999999999999999999999864
No 24
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.1e-39 Score=275.43 Aligned_cols=214 Identities=26% Similarity=0.412 Sum_probs=187.9
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLS 87 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~ 87 (235)
+...++|++++++|++|.+|+ ..++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+...... .
T Consensus 199 ~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~ 274 (501)
T 3ipl_A 199 LGFDRDTNWLSVLPIYHISGL-SVLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEP---Y 274 (501)
T ss_dssp TCCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSC---T
T ss_pred hCCCccCEEEEeCcHHHHHHH-HHHHHHHHcCceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCc---C
Confidence 445677999999999999999 568899999999999999999999999999999999999999999998765433 2
Q ss_pred CceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCC
Q 026632 88 SLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPN 167 (235)
Q Consensus 88 ~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g 167 (235)
++|.+++||+++++++.+.+.+ + ++++++.||+||+++.+.............++|+|+++++++++|++ .|
T Consensus 275 ~lr~i~~gG~~l~~~~~~~~~~-~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~------~~ 346 (501)
T 3ipl_A 275 NLQKILLGGAKLSATMIETALQ-Y-NLPIYNSFGMTETCSQFLTATPEMLHARPDTVGMPSANVDVKIKNPN------KE 346 (501)
T ss_dssp TCCEEEECSSCCCHHHHHHHHH-T-TCCEEEEEEEGGGTEEEEEECHHHHHHCTTCCBEECTTCEEEEESCC------SS
T ss_pred cccEEEEeCCCCCHHHHHHHHH-h-CCCEeccccccccccceeecCccccccCCCCCCCCCCCcEEEEecCC------CC
Confidence 8999999999999999999987 4 59999999999998755543322112345679999999999999964 46
Q ss_pred CceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 168 QLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 168 ~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+.|||+++|+.++.||+++++.+.. + .+|||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 347 ~~GEl~v~g~~~~~gY~~~~~~t~~-~-~~g~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~e 412 (501)
T 3ipl_A 347 GHGELMIKGANVMNGYLYPTDLTGT-F-ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQ 412 (501)
T ss_dssp CCEEEEEESTTSCSCCSBSTTCCCS-E-ETTEEEEEEEEEECTTSCEEEEEECCCCEECSSCEECHHH
T ss_pred CccEEEEeccchhhhhCcChhhcch-h-cCCceecCCEEEEcCCCeEEEEccccceEEECCEEECHHH
Confidence 7799999999999999999999887 5 7899999999999999999999999999999999999863
No 25
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=6.5e-39 Score=275.76 Aligned_cols=218 Identities=37% Similarity=0.545 Sum_probs=175.4
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDL 86 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l 86 (235)
.+...++|++++++|++|.+|+...+...+..|+++++ .++++..+++.++++++|++.++|+++..+++.. ....+
T Consensus 195 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l 271 (509)
T 3ivr_A 195 AWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIA-AKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA--APAQL 271 (509)
T ss_dssp HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEC-SSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC--CGGGG
T ss_pred hhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEe-cccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc--cccch
Confidence 34566789999999999999995544445555555544 5889999999999999999999999999998876 33457
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPP 166 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~ 166 (235)
+++|.++.+|++ ++.+.+.+.++++++++.||+||+++++...... .....+|+|+++++++++|+ ++++++.
T Consensus 272 ~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~---~~~~~~G~p~~~~~~~i~d~-~~~~~~~ 344 (509)
T 3ivr_A 272 ASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLSTFAPYR---DRPKSAGRPLFWRTVAVVDA-EDRPLPP 344 (509)
T ss_dssp TTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEEEEEEGG---GSTTSCCEECTTCEEEEECT-TSCBCCT
T ss_pred hhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccccccccCccc---cCCCcccccCCCcEEEEECC-CCCCCCC
Confidence 899999999987 8889999999779999999999999876654432 12234899999999999995 6999999
Q ss_pred CCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEecc--CCceEeccEEeecCC
Q 026632 167 NQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRI--KELIKYKGFQVTSNW 235 (235)
Q Consensus 167 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~--~d~i~~~G~~v~p~~ 235 (235)
|+.|||+++||.++.||+++|+.+.+.| .+|||+|||+|+++++|++++.||+ ||+||++|++|+|.|
T Consensus 345 g~~GEl~v~g~~~~~gY~~~~~~t~~~f-~~g~~~TGDl~~~~~dG~l~~~GR~d~~d~ik~~G~~v~p~e 414 (509)
T 3ivr_A 345 GEVGEIVLRGPTVFKGYWNNAAATQHAF-RNGWHHTGDMGRFDADGYLFYAGRAPEKELIKTGGENVYPAE 414 (509)
T ss_dssp TCCEEEEEESTTSCCEETTCHHHHHHHT-GGGSEEEEEEEEECTTSCEEEEEEC-----------------
T ss_pred CCceEEEEecCCccccccCCHHHhHHHh-hcCCcccccEEEECCCceEEEeCCCCcceeEEECCEEECHHH
Confidence 9999999999999999999999999999 6899999999999999999999999 999999999999975
No 26
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=9.9e-39 Score=277.63 Aligned_cols=217 Identities=19% Similarity=0.222 Sum_probs=188.9
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCC
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKF 84 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~ 84 (235)
+...++|++++++|++|..++ ..++.+++.|+++++.+. +++..+++.++++++|++.++|+++..+.+.
T Consensus 218 ~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------ 290 (563)
T 1amu_A 218 LNVTEKDRIGQFASISFDASV-WEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE------ 290 (563)
T ss_dssp SCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT------
T ss_pred cCCCCCCEEEEeCCccHHHHH-HHHHHHHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc------
Confidence 445677999999999999998 577889999999999875 6899999999999999999999988766432
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC-CCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA-GSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~-~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
.++++|.+++||+++++++.+.+.+. +++++.||+||++.++....... ......++|+|+++++++++|+ ++++
T Consensus 291 ~~~~lr~~~~gG~~l~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~-~~~~ 366 (563)
T 1amu_A 291 RILSIQTLITAGSATSPSLVNKWKEK---VTYINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDE-NLQL 366 (563)
T ss_dssp TCCSCSEEEEESSCCCHHHHHHHTTT---SEEEEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEECT-TSCB
T ss_pred ccccccEEEEEEecCCHHHHHHHHhC---CeEEEEECcCHHhHhheeeecccccCCCCCcccceeCCCEEEEECC-CcCC
Confidence 36789999999999999999998764 78999999999997666543221 1234567999999999999994 8999
Q ss_pred CCCCCceEEEEEcCcccccccCCcccccccccC------CCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK------KGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~------~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++.|+.|||+++||.++.||+++|+.+.+.|.. ++||+|||+|+++++|++++.||+||+||++|++|+|.|
T Consensus 367 ~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~dG~l~i~GR~~d~Ik~~G~~V~p~e 444 (563)
T 1amu_A 367 KSVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEE 444 (563)
T ss_dssp CCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHH
T ss_pred CCCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEcCCCeEEEeccccCEEEECCEEeCHHH
Confidence 999999999999999999999999999888732 469999999999999999999999999999999999864
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=6.3e-40 Score=286.63 Aligned_cols=226 Identities=27% Similarity=0.347 Sum_probs=193.1
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCC----CHHHHHHHHHhccceEEeecHHHHHHHHhcC---
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILALAKHG--- 79 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~----~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~--- 79 (235)
.+...++|++++++|++|.+|+...++.+++.|+++++.+++ ++..+++.++++++|++.++|+++..+.+..
T Consensus 202 ~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~ 281 (590)
T 3kxw_A 202 SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREE 281 (590)
T ss_dssp HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGG
T ss_pred hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhh
Confidence 345667899999999999999966689999999999998865 7899999999999999999999999887753
Q ss_pred CcCCCCCCCceEEEecccCCcHHHHHHHHHhCC-----CCceeccccccccccccccccCCC------------------
Q 026632 80 LVKKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFA------------------ 136 (235)
Q Consensus 80 ~~~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~i~~~yG~tE~g~~~~~~~~~~------------------ 136 (235)
......++++|.++.||+++++++.+++.+.|+ +.++++.||+||++.+++......
T Consensus 282 ~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (590)
T 3kxw_A 282 KKEGLDLSSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVH 361 (590)
T ss_dssp GGTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCC
T ss_pred hccCCCchhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCcee
Confidence 334557899999999999999999999999874 357999999999998766432110
Q ss_pred -------CCCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccC------CC--eEe
Q 026632 137 -------GSRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDK------KG--WVH 201 (235)
Q Consensus 137 -------~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~------~g--~~~ 201 (235)
......++|+|+++ ++++|++++++++.|+.|||+|+||.++.||+++|+.+.+.|.. +| ||+
T Consensus 362 ~~~~~~~~~~~~~~~G~p~~~--v~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~ 439 (590)
T 3kxw_A 362 FADDNSPGSYKLVSSGNPIQE--VKIIDPDTLIPCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLR 439 (590)
T ss_dssp BCCTTCTTCEEEECCCEESSE--EEEECTTTCCBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEE
T ss_pred eccCCCCCcceEeccCCCCCC--eEEEcCCCCcCCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEe
Confidence 01123467899988 88899877999999999999999999999999999999988843 24 999
Q ss_pred cCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 202 TGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 202 TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
|||+|+++ +|.+++.||+||+||++|++|+|.|
T Consensus 440 TGDlg~~d-dG~l~~~GR~dd~Ik~~G~~v~p~e 472 (590)
T 3kxw_A 440 TGDLGFLH-ENELYVTGRIKDLIIIYGKNHYPQD 472 (590)
T ss_dssp EEEEEEEE-TTEEEEEEESSCHHHHHHHTTHHHH
T ss_pred cCcEEEEE-CCEEEEEcCccceEEECCEecCHHH
Confidence 99999998 9999999999999999999999864
No 28
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=2.2e-38 Score=276.06 Aligned_cols=225 Identities=25% Similarity=0.392 Sum_probs=193.9
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCc--
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLV-- 81 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~-- 81 (235)
+...++|++++++|++|.+|+...++.++..|+++++.+. +++..+++.++++++|+++++|+++..+.+....
T Consensus 213 ~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~ 292 (576)
T 3gqw_A 213 IKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKD 292 (576)
T ss_dssp SCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHH
T ss_pred cCCCCcceEEEcCCccccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccc
Confidence 4566779999999999999997778889999999998764 5889999999999999999999999887765432
Q ss_pred -CCCCCCCceEEEecccCCcHHHHHHHHHhCC-----CCceeccccccccccccccccCCCCC-----------------
Q 026632 82 -KKFDLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAGS----------------- 138 (235)
Q Consensus 82 -~~~~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~i~~~yG~tE~g~~~~~~~~~~~~----------------- 138 (235)
....++++|.++.||+++++++.+++.+.|+ +.++++.||+||++.++.........
T Consensus 293 ~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 372 (576)
T 3gqw_A 293 LAELDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAV 372 (576)
T ss_dssp HTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCC
T ss_pred cccCChhhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCccc
Confidence 3456889999999999999999999999874 58899999999999877654321100
Q ss_pred ---------CCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEc
Q 026632 139 ---------RNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFD 209 (235)
Q Consensus 139 ---------~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~ 209 (235)
.....+|+|+++++++++| +++++++.|+.|||+++||.++.||+++++.+...+ .+|||+|||+|++
T Consensus 373 ~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~- 449 (576)
T 3gqw_A 373 APGAETRAVSTFVNCGKALPEHGIEIRN-EAGMPVAERVVGHICISGPSLMSGYFGDQVSQDEIA-ATGWLDTGDLGYL- 449 (576)
T ss_dssp CCCTTCCCEEEEEBCCEECTTCEEEEEC-TTSCBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHH-HHSCEEEEEEEEE-
T ss_pred ccCccccCccceeecCCcCCCCeEEEEC-CCCCCCCCCCeEEEEEeCccccccccCCcccccccc-CCCeeeccceEEE-
Confidence 0012689999999999999 589999999999999999999999999998877655 7899999999999
Q ss_pred CCCcEEEEeccCCceEeccEEeecCC
Q 026632 210 GDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 210 ~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++|++++.||+||+||++|++|+|.|
T Consensus 450 ~dG~l~~~GR~dd~ik~~G~~v~p~e 475 (576)
T 3gqw_A 450 LDGYLYVTGRIKDLIIIRGRNIWPQD 475 (576)
T ss_dssp ETTEEEEEEETTTCEEETTEEECHHH
T ss_pred ECCEEEEEecCcceEEECCEEECHHH
Confidence 79999999999999999999999864
No 29
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=6.8e-38 Score=272.40 Aligned_cols=218 Identities=18% Similarity=0.222 Sum_probs=176.0
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCC-HHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCCCCC
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFD-LEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFDLSS 88 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~-~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~ 88 (235)
....+++++..|++|..++ ..++.++..|+++++.+.+. +..+++.++++++|++.++|+++..+... ...+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~----~~~~~~ 295 (562)
T 3ite_A 221 LGGVGKFLCLASRAFDVHI-GEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV----PEDAPH 295 (562)
T ss_dssp CTTTCEEECCSCTTSTHHH-HHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC----GGGSTT
T ss_pred cCcCceEEEecCchhhhhH-HHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC----ccccCc
Confidence 4556899999999999887 57788999999999987654 57788999999999999999988877433 235789
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCCCCC
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLPPNQ 168 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~ 168 (235)
+|.+++||+++++++.+.+.+.++ +++++.||+||++..+....... .....++|+|+++++++++|++++++++.|+
T Consensus 296 lr~~~~gG~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g~ 373 (562)
T 3ite_A 296 LVYLGVGGEKMTPRTQQIWSSSDR-VALVNVYGPTEVTIGCSAGRILP-DSDTRCIGHPLGDSVAHVLAPGSNEHVKKGM 373 (562)
T ss_dssp CCEEEEESSCCCHHHHHHHTTCSS-CEEEEEECCGGGCSCSEEEECCT-TSCTTEEEEECTTCEEEEECTTSSCBCCTTS
T ss_pred eEEEEEecCCCCHHHHHHHhhCCC-cEEEEeeccchheeeeeeeeecC-CCCCccccccCCCCeEEEEeCCCCCCCCCCC
Confidence 999999999999999999988765 99999999999987666543322 3455689999999999999988899999999
Q ss_pred ceEEEEEcCcccccccCCcccccccccCCC--eEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 169 LGEIWLRGPNMMRGYYNNEQATKLTIDKKG--WVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 169 ~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g--~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.|||+++||.++.||+++|+.+...+ .+| ||+|||+|++|++|++++.||+||+||++|++|+|.|
T Consensus 374 ~GEl~v~g~~v~~GY~~~p~~t~~~~-~~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~v~p~e 441 (562)
T 3ite_A 374 AGELVIEGSLVANGYLNRPDAKGFCD-INGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQRLELGE 441 (562)
T ss_dssp CEEEEEESTTSCCEESSCTTCCSEEE-ETTEEEEEEEEEEEECTTSCEEEEEEC---------------
T ss_pred ceEEEEeccccchhhCCCcccccccc-CCCCEEEecCCEEEEcCCCeEEEEccccCEEeECcEEECHHH
Confidence 99999999999999999999888665 455 9999999999999999999999999999999999975
No 30
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=6.8e-37 Score=287.65 Aligned_cols=224 Identities=19% Similarity=0.199 Sum_probs=196.1
Q ss_pred eccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC---CCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCC
Q 026632 7 ETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK---FDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKK 83 (235)
Q Consensus 7 ~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~---~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~ 83 (235)
.+...++|+++++.|++|..+. ..++.++..|+++++.+. .++..+++.++++++|++.++|+++..+.+...
T Consensus 641 ~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~--- 716 (1304)
T 2vsq_A 641 YMAFSDQDTFLSVSNYAFDAFT-FDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGE--- 716 (1304)
T ss_dssp SSCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCS---
T ss_pred hcCCCCCCEEEEECCccHHHHH-HHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhch---
Confidence 4455677999999999999887 688999999999999874 689999999999999999999999999876532
Q ss_pred CCCCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCC--CCCCCCcccccCCCcEEEEEeCCCC
Q 026632 84 FDLSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFA--GSRNIGSAGALAPGVEALIVSVDTQ 161 (235)
Q Consensus 84 ~~l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~--~~~~~~~~g~p~~~~~~~~~d~~~~ 161 (235)
..++++|.+++|||++++++.+.+.+.+++.+++|.||+||++.+++...... .......+|+|++++++.++|+ .+
T Consensus 717 ~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~-~~ 795 (1304)
T 2vsq_A 717 DWMKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNE-QS 795 (1304)
T ss_dssp HHHHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECT-TS
T ss_pred hcCCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECC-Cc
Confidence 23578999999999999999999999888789999999999998766543221 1233457899999999999995 78
Q ss_pred ccCCCCCceEEEEEcCcccccccCCccccccccc------CCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 162 KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID------KKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 162 ~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~------~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
++++.|+.|||+|+|+.+++||+++|+.|++.|. .++||+|||+|+++++|.+++.||+||+||++|++|.|.|
T Consensus 796 ~~~p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rie~~e 875 (1304)
T 2vsq_A 796 QLQPFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEE 875 (1304)
T ss_dssp CBCCTTCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHH
T ss_pred CCCCCCCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEeeCHHH
Confidence 9999999999999999999999999999998883 2459999999999999999999999999999999999864
No 31
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=1e-36 Score=260.11 Aligned_cols=204 Identities=21% Similarity=0.375 Sum_probs=176.7
Q ss_pred CcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCC----CHHHHHHHHHhccceEEeecHHHHHHHHhc----CCcCCC
Q 026632 13 DYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILALAKH----GLVKKF 84 (235)
Q Consensus 13 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~----~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~----~~~~~~ 84 (235)
+|++++++|++|.+|+...++.++..|+++++.++. ++..+++.++++++| +.++|+++..++.. ......
T Consensus 230 ~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~ 308 (480)
T 3t5a_A 230 NSALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGR 308 (480)
T ss_dssp TEEEEECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTC
T ss_pred CCeEEEeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCccccccc
Confidence 899999999999999877889999999999998753 899999999999999 78889988887763 334456
Q ss_pred CCCCceEEEecccCCcHHHHHHHHHhCC-----CCceeccccccccccccccccCCCC----------------------
Q 026632 85 DLSSLKLVGSGAAPLGKELMEECAKNVP-----SATVIQGYGLTETSGIATMENSFAG---------------------- 137 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~~~~~~~~~~-----~~~i~~~yG~tE~g~~~~~~~~~~~---------------------- 137 (235)
.++++|.+++||+++++++.+++++.|+ ++++++.||+||++.+++.......
T Consensus 309 ~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 388 (480)
T 3t5a_A 309 DLGNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGG 388 (480)
T ss_dssp CCTTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSS
T ss_pred chhhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCC
Confidence 7899999999999999999999999984 4589999999999987765432211
Q ss_pred -CCCCCcccccCCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCccccccccc-----------CCCeEecCce
Q 026632 138 -SRNIGSAGALAPGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTID-----------KKGWVHTGDL 205 (235)
Q Consensus 138 -~~~~~~~g~p~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~-----------~~g~~~TgDl 205 (235)
.....++|+|++ .+++++|++++++++.|+.|||+|+||.++.||+++|+.+++.|. .+|||+|||+
T Consensus 389 ~~~~~~~~G~p~~-~~~~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDl 467 (480)
T 3t5a_A 389 GATSLISYMLPRS-PIVRIVDSDTCIECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDS 467 (480)
T ss_dssp SCEEEECEECCSS-SEEEEEETTTTEECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEE
T ss_pred CcceeeecCcccC-CEEEEEcCCCCcCCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeeccce
Confidence 122347899999 999999987899999999999999999999999999999998884 5679999999
Q ss_pred EEEcCCCcEEEEec
Q 026632 206 GYFDGDGQLYVVDR 219 (235)
Q Consensus 206 ~~~~~~g~~~~~GR 219 (235)
|+++ +|+++|.||
T Consensus 468 g~~d-dG~l~~~GR 480 (480)
T 3t5a_A 468 GFVT-DGKMFIIGR 480 (480)
T ss_dssp EEEE-TTEEEECC-
T ss_pred eeEE-CCEEEEeCC
Confidence 9996 999999998
No 32
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=4.5e-35 Score=247.37 Aligned_cols=208 Identities=17% Similarity=0.158 Sum_probs=177.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC--C
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD--L 86 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~--l 86 (235)
...++|++++++|+.|..+.+..++.++..|+++++.+..++..+++.++++++|+++++|+++..|++........ +
T Consensus 126 ~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 205 (436)
T 3qov_A 126 GIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRE 205 (436)
T ss_dssp TCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTS
T ss_pred CCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCccc
Confidence 45677999999999877777678889999999999998889999999999999999999999999998875544433 7
Q ss_pred CCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccc-cccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 87 SSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGI-ATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 87 ~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~-~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
+++|.+++||+++++++.+.+.+.|+ +++++.||+||+++. ....+.. . ...+.|.+++.++++|++++++++
T Consensus 206 ~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~~YG~TE~~~~~~~~~~~~----~-~g~~~~~~~~~v~i~d~~~g~~~~ 279 (436)
T 3qov_A 206 TTLKTLVIGAEPHTDEQRRKIERMLN-VKAYNSFGMTEMNGPGVAFECQE----Q-NGMHFWEDCYLVEIIDPETGEPVP 279 (436)
T ss_dssp SSCCEEEEESSCCCHHHHHHHHHHHT-SEEEEEEEEGGGTEEEEEEECTT----C-SSEEECTTTEEEEEECTTTCSBCS
T ss_pred CCccEEEEeCCcCCHHHHHHHHHHhC-ccEEecCcchhhcCCeeEEecCC----C-CeeEEccCceEEEEEECCCCCCCC
Confidence 89999999999999999999999995 999999999999543 3333211 1 225677789999999988999999
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCC------c---EEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDG------Q---LYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g------~---~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+|+.|||++++.+ ...+ +++||+|||+++++++| + +++.||.||+||++|++|+|.+
T Consensus 280 ~g~~Gel~v~~~~------------~~~~-~~~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~e 345 (436)
T 3qov_A 280 EGEIGELVLTTLD------------REMM-PLIRYRTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQ 345 (436)
T ss_dssp TTCCEEEEEEESS------------CCSS-CCCSEEEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHH
T ss_pred CCCceEEEEeccC------------cCCc-eEEEEEcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHH
Confidence 9999999999842 2233 78899999999999988 4 6999999999999999999853
No 33
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=3.8e-34 Score=241.74 Aligned_cols=209 Identities=19% Similarity=0.184 Sum_probs=173.4
Q ss_pred ccCCCCcEEEEecCh-hHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC-
Q 026632 8 TAGELDYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD- 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~- 85 (235)
+...++|++++++|+ +|..++ ..++.++..|+++++.+.++++.+++.++++++|+++++|+++..|++........
T Consensus 129 ~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~ 207 (437)
T 2y27_A 129 AGARRGDKVHVSYGYGLFTGGL-GAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDP 207 (437)
T ss_dssp TTCCTTCEEEECSCCSSSHHHH-HHHHHHHHTTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCG
T ss_pred cCCCCCCEEEEcccccccccch-HHHHHHHHcCCEEEeCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCc
Confidence 345677999999998 677776 56788999999999988889999999999999999999999999998765433333
Q ss_pred -CCCceEEEecccCCcHHHHHHHHHhCCCCceecccccccc-ccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 86 -LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 86 -l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~-g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
++++|.+++||+++++++.+.+.+.|+ +++++.||+||+ +..+...+.. ... ..+.|.+++.++++|++++++
T Consensus 208 ~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~~YG~TE~~g~~~~~~~~~---~~~-g~~~~~~~~~~~i~d~~~g~~ 282 (437)
T 2y27_A 208 VQSSLRIGIFGAEPWTNDMRVAIEQRMG-IDAVDIYGLSEVMGPGVASECVE---TKD-GPTIWEDHFYPEIIDPETGEV 282 (437)
T ss_dssp GGSSCCEEEEESSCCCHHHHHHHHHHHT-SEEEEEEEETTTTEEEEEECCTT---TCS-SCEECTTTEEEEEECTTTCCB
T ss_pred ccCCeeEEEEcCccCCHHHHHHHHHHHC-cCEEecCCchhhcCCeeEEecCC---CCC-ceeEccCceEEEEEcCCCCCC
Confidence 478999999999999999999999885 999999999998 4423333221 111 245677899999999878999
Q ss_pred CCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcC-CCcE-----EEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG-DGQL-----YVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~-~g~~-----~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+++|+.|||++++. +.+.+ +++||+|||++++++ +|++ ++.||.||+|+++|++|+|.+
T Consensus 283 ~~~g~~Gel~v~~~------------t~~~~-~~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~e 347 (437)
T 2y27_A 283 LPDGELGELVFTSL------------TKEAL-PIIRYRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQ 347 (437)
T ss_dssp CCTTCCEEEEEEES------------SCSSS-CCCSEEEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHH
T ss_pred CCCCCccEEEEecC------------CcCCc-hhheeecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHH
Confidence 99999999999983 23334 688999999999998 6885 899999999999999999853
No 34
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=6.4e-34 Score=240.78 Aligned_cols=209 Identities=22% Similarity=0.204 Sum_probs=173.2
Q ss_pred ccCCCCcEEEEecCh-hHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC-
Q 026632 8 TAGELDYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD- 85 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~- 85 (235)
+...++|++++++|+ +|..++ ..++.++..|+++++.+.++++.+++.++++++|+++++|+++..|++........
T Consensus 131 ~~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~ 209 (443)
T 2y4o_A 131 AGGRPGDTLHNAFGYGLFTGGL-GIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDP 209 (443)
T ss_dssp TTCCTTCEEEECSCCSSSHHHH-HHHHHHHHHTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCG
T ss_pred cCCCCCCEEEEeccCcccccHH-HHHHHHHHcCCEEEECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCc
Confidence 445677999999998 466666 67888999999999998889999999999999999999999999998765433333
Q ss_pred -CCCceEEEecccCCcHHHHHHHHHhCCCCceecccccccc-ccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCcc
Q 026632 86 -LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTET-SGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKP 163 (235)
Q Consensus 86 -l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~-g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~ 163 (235)
++++|.+++||+++++++.+.+.+.|+ +++++.||+||+ +..+...+.. ...+ .+.|.+++.++++|++++++
T Consensus 210 ~~~~lr~i~~gGe~l~~~~~~~~~~~~g-~~v~~~YG~TE~~g~~~~~~~~~---~~~g-~~~~~~~~~~~i~d~~~g~~ 284 (443)
T 2y4o_A 210 AESSLKIGIFGAEPWTQALRNEVETRVG-IDALDIYGLSEVMGPGVACECVE---TKDG-PVIWEDHFYPEIIDPVTGEV 284 (443)
T ss_dssp GGSSCCEEEEESSCCCHHHHHHHHHHHT-CEEEEEEEETTTTEEEEEEECTT---TCCS-EEECTTTEEEEEECTTTCCB
T ss_pred ccCCceEEEECCCcCCHHHHHHHHHHhC-cCEEeccCchhhcCCeEEeccCC---CCCc-eEEccCCeEEEEEcCCCCCC
Confidence 479999999999999999999999885 999999999997 4423333221 1112 45567899999999878999
Q ss_pred CCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCC-CcE-----EEEeccCCceEeccEEeecCC
Q 026632 164 LPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD-GQL-----YVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 164 v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~-g~~-----~~~GR~~d~i~~~G~~v~p~~ 235 (235)
+++|+.|||++++. +.+.+ +++||+|||+++++++ |++ ++.||.||+||++|++|+|.+
T Consensus 285 ~~~G~~Gel~v~~~------------t~~~~-p~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~e 349 (443)
T 2y4o_A 285 LPDGSQGELVFTSL------------TKEAM-PVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQ 349 (443)
T ss_dssp CCTTCCEEEEEEES------------SCSSS-CCSSEEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHH
T ss_pred CCCCCceEEEEeCC------------CcccC-hhheeecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHH
Confidence 99999999999973 22334 6789999999999998 986 899999999999999999853
No 35
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=2e-33 Score=231.54 Aligned_cols=194 Identities=16% Similarity=0.195 Sum_probs=160.9
Q ss_pred eeccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCCCHHHHHHHHHhccceEEeecHHHHHHHHhcCCcCCCC
Q 026632 6 QETAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKFDLEMFLRAIEKHRVTHIWVVPPLILALAKHGLVKKFD 85 (235)
Q Consensus 6 ~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~ 85 (235)
..+...++|++++++|++|.+|+ ..++.++..|+++++.++. ...++.++++++|++.++|+++..+++..... ..
T Consensus 71 ~~~~~~~~d~~l~~~pl~h~~gl-~~~~~~l~~g~~~~~~~~~--~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~~~-~~ 146 (358)
T 4gs5_A 71 KALSLGPGTRALVCLNVGYIAGL-MMLVRGMELDWELTVTEPT--ANPLAGLDHADFDFVAMVPMQLQSILENSATS-GQ 146 (358)
T ss_dssp HHTTCCTTCEEEECSCTTSHHHH-HHHHHHHHHTCEEEEECCC--SCTTTTCSSCCCSEEEECHHHHHHHHHCTTTG-GG
T ss_pred HHhCCCCCCEEEEECChHHHHHH-HHHHHHHHhCcEEEecCcc--ccHHHHHHHhCCeEEEcChHHHHHhhcccccc-cc
Confidence 34556678999999999999999 5678888889998887642 12366789999999999999999999876543 36
Q ss_pred CCCceEEEecccCCcHHHHHHHHHhCCCCceeccccccccccccccccCCCCCCCCCcccccCCCcEEEEEeCCCCccCC
Q 026632 86 LSSLKLVGSGAAPLGKELMEECAKNVPSATVIQGYGLTETSGIATMENSFAGSRNIGSAGALAPGVEALIVSVDTQKPLP 165 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~d~~~~~~v~ 165 (235)
++++|.+++||+++++++.+++++. ++++++.||+||+++.+...... ....+..|.+.|++.+.+.+
T Consensus 147 l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TEt~~~~~~~~~~--~~~~g~~~~~~pgv~~~~~~-------- 214 (358)
T 4gs5_A 147 VDRLGKVLLGGAPVNHALAMQISDL--AMPVYQSYGMTETVSHVALKALN--GPEASELYVFLPGIQYGVDE-------- 214 (358)
T ss_dssp GGGGCSEEECSSCCCHHHHHHHHTC--SSCEEEEEECGGGSSEEEEEECS--STTCCSCEEECTTCEEEECT--------
T ss_pred CCcceEEEEcccCCCchheeccccc--CceEEeccccccccceeeccccc--ccccceeeccCCCeEEEecC--------
Confidence 8999999999999999999999874 58999999999999877765544 34457788999998877643
Q ss_pred CCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCCCcEEEEeccCCceEeccEEeecCC
Q 026632 166 PNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGDGQLYVVDRIKELIKYKGFQVTSNW 235 (235)
Q Consensus 166 ~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~ 235 (235)
.||++++++.. .+|||+|||+|++|++| +.+.||+||+||++|++|+|+|
T Consensus 215 ---~Gel~~~g~~~----------------~~g~~~TGDlg~~d~~g-~~~~GR~dd~Ik~~G~~v~p~e 264 (358)
T 4gs5_A 215 ---RGCLHISGAVT----------------NGQTVQTNDLVEIHGNA-FQWIGRADNVINSGGVKIVLDQ 264 (358)
T ss_dssp ---TSEEEEESGGG----------------TTCCEEEEEEEEECSSE-EEEEEEGGGEEEETTEEEEHHH
T ss_pred ---cCceEEecccc----------------cCcceecCCccccccCc-eEEcccccCeEEECCEEECHHH
Confidence 39999988632 67899999999999888 6677999999999999999864
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.95 E-value=4.3e-27 Score=194.44 Aligned_cols=199 Identities=16% Similarity=0.161 Sum_probs=150.2
Q ss_pred ccCCCCcEEEEecCh-hHHHhHHHHHHHHhhcCcEEEEccCCCHH-----------------------HHHHHHHhccce
Q 026632 8 TAGELDYVFLCVLPL-FHVFGLAVITCGQLQKGSCIILMAKFDLE-----------------------MFLRAIEKHRVT 63 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~-~~~~g~~~~~~~~l~~G~~~v~~~~~~~~-----------------------~~~~~l~~~~~t 63 (235)
....++|++++++|+ +|..|+ ...+.++..|+ +++...+++. .+++.++++++|
T Consensus 130 ~~~~~~d~~l~~~p~g~~~~g~-~~~~~~~~~G~-~v~~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t 207 (369)
T 3hgu_A 130 RPGRPSGNTLAAIPTGPHIVGA-INKERALRLGG-MFFSIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIR 207 (369)
T ss_dssp STTCCCCEEEECSCCTTCHHHH-HHHHHHHHTTS-CEECCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEE
T ss_pred hCCCCcceEEEecCCCchhhhH-HHHHHHHHcCC-EEECccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCC
Confidence 344667999999999 999998 45566688888 6666667777 888899999999
Q ss_pred EEeecHHHHHHHHhcCCcCCCCCCCceEEEecccCCcHHHHHHHH-HhCCCCceeccccccccccccccccCCCCCCCCC
Q 026632 64 HIWVVPPLILALAKHGLVKKFDLSSLKLVGSGAAPLGKELMEECA-KNVPSATVIQGYGLTETSGIATMENSFAGSRNIG 142 (235)
Q Consensus 64 ~~~~~p~~~~~l~~~~~~~~~~l~~lr~i~~~G~~~~~~~~~~~~-~~~~~~~i~~~yG~tE~g~~~~~~~~~~~~~~~~ 142 (235)
++.++|+++..|++........++++|.+++||+++++++.+.+. +.||++++++.||+||+++++..+.. .
T Consensus 208 ~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~-------~ 280 (369)
T 3hgu_A 208 FLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI-------T 280 (369)
T ss_dssp EEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB-------C
T ss_pred EEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCHHHHHHHHHHhCCCcEEEcccCchhhhcceecccc-------c
Confidence 999999999999887543334568999999999999999999999 99977999999999999876643321 1
Q ss_pred ccccc------CCCcEEEEEeCCCCccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcCC--C--
Q 026632 143 SAGAL------APGVEALIVSVDTQKPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDGD--G-- 212 (235)
Q Consensus 143 ~~g~p------~~~~~~~~~d~~~~~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~~--g-- 212 (235)
..|+| .++++++++|+++++++++|+.|||+|++... ..+ -.+|+|||+++..+. |
T Consensus 281 ~~G~~~~~~~~~~~~~v~ivD~~~g~~vp~G~~GEl~vt~l~~------------~~~--l~ry~tgD~~~~~~~~~g~~ 346 (369)
T 3hgu_A 281 SESQQVIYDSFSPFITYDVVDSITAQTVEYGERGNVIVTHLSP------------WAF--YPRVAERDTAIRLPGVSGFA 346 (369)
T ss_dssp TTCSSCEEECCTTTEEEEEECTTTCSBCCTTCEEEEEEEEEET------------TEE--EEEEEEEEEEEEECCSTTCS
T ss_pred cCCCcccccCCCCCeEEEEECCCCCcCCCCCCceEEEEEEcCc------------ccc--cccccCCceEEEecCCCCCc
Confidence 36777 89999999998799999999999999987321 111 225999999988543 2
Q ss_pred -----cEEEEeccCCceEeccE
Q 026632 213 -----QLYVVDRIKELIKYKGF 229 (235)
Q Consensus 213 -----~~~~~GR~~d~i~~~G~ 229 (235)
-+...+|.++..++.|.
T Consensus 347 ~d~~~~v~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 347 GDRLADIEPLKISEGRKVIEGV 368 (369)
T ss_dssp SCEEEEEEECC-----------
T ss_pred CcccccceeccccCCCceeeec
Confidence 14556677777777664
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=98.66 E-value=2.9e-08 Score=85.44 Aligned_cols=122 Identities=13% Similarity=0.135 Sum_probs=79.0
Q ss_pred ceEEEecccCCcHHHHHHHHHhCCCCcee-ccccccccccccccccCCCCCCCCCccc-ccC-CCcEEEEEeCCCC----
Q 026632 89 LKLVGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGSAG-ALA-PGVEALIVSVDTQ---- 161 (235)
Q Consensus 89 lr~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~g~~~~~~~~~~~~~~~~~~g-~p~-~~~~~~~~d~~~~---- 161 (235)
+..++.||- ..-.+.++..+|+..+. ..|++||.. ++.-..+ ...+...+ ..+ ..+..+.++.++.
T Consensus 302 l~~~~~G~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~-~gi~~~p---~~~~~~~~~~L~~~~~ffEFip~~~~~~~~ 374 (581)
T 4eql_A 302 IETVVTGSM---GQYVPMLNYYCNDLPLVSTTYGSSETT-FGINLDP---LCKPEDVSYTFMPNMSYFEFIPMDGGDKND 374 (581)
T ss_dssp EEEECSGGG---GGGHHHHHHHHTTCCEECCEEECSSCE-EEECSCT---TSCGGGCCEEECTTSSEEEEEECSTTCCSS
T ss_pred EEEEcCCCh---HHHHHHHHHHcCCCccccCccccccce-eeeccCC---CCCcccCceeecCCcEEEEEEeccccCCCc
Confidence 656677774 33334454555667777 999999953 3321111 11111111 112 2256777764321
Q ss_pred ----ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcC----CCcEEEEeccCCceEeccEEeec
Q 026632 162 ----KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG----DGQLYVVDRIKELIKYKGFQVTS 233 (235)
Q Consensus 162 ----~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~----~g~~~~~GR~~d~i~~~G~~v~p 233 (235)
..|+.|+.+||++++.. |.| .|++||+.++.. ..++.+.||.++++++.|+|+++
T Consensus 375 ~v~l~eVe~G~~YelViTt~~---GL~--------------RYr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~ 437 (581)
T 4eql_A 375 VVDLEDVKLGCTYEPVVTNFA---GLY--------------RMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNE 437 (581)
T ss_dssp CEEGGGCCTTCEEEEEEECSS---SCC--------------SEECCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEH
T ss_pred EeCHHHcCCCceEEEEEeecc---cee--------------eEEcCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCH
Confidence 35679999999999853 223 299999999864 46799999999999999999987
Q ss_pred C
Q 026632 234 N 234 (235)
Q Consensus 234 ~ 234 (235)
+
T Consensus 438 ~ 438 (581)
T 4eql_A 438 E 438 (581)
T ss_dssp H
T ss_pred H
Confidence 4
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.60 E-value=4e-08 Score=84.78 Aligned_cols=125 Identities=13% Similarity=0.109 Sum_probs=80.0
Q ss_pred CCC---ceEEEecccCCcHHHHHHHHHhCCCCcee-ccccccccccccccccCCCCCCCCCccc-ccC-CCcEEEEEeCC
Q 026632 86 LSS---LKLVGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGSAG-ALA-PGVEALIVSVD 159 (235)
Q Consensus 86 l~~---lr~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~g~~~~~~~~~~~~~~~~~~g-~p~-~~~~~~~~d~~ 159 (235)
-++ +..++.||- ..-.+.++..+++..++ ..|++||.. ++.-..+ ...+...+ ..+ ..+..+.++.+
T Consensus 301 WPnlk~l~~~~tG~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~-~gi~~~p---~~~p~~~~~~L~p~~~ffEFIP~~ 373 (609)
T 4b2g_A 301 WPNTKYLDVIVTGAM---AQYIPTLDYYSGGLPLACTMYASSECY-FGLNLNP---MSKPSEVSYTIMPNMAYFEFLPHE 373 (609)
T ss_dssp STTCCEEEEECSGGG---GGGHHHHHHHHTSCCEECCEEECSSCE-EEECSCT---TSCGGGCCEEECTTSCEEEEEEGG
T ss_pred CCCCcEEEEEccCCh---HHHHHHHHHHcCCCccccCccccccee-eeeecCC---CCCcccCceeecCCcEEEEEEecc
Confidence 356 445666663 33334454555667777 999999974 3332211 11111111 112 22566777543
Q ss_pred CC---------------ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcC----CCcEEEEecc
Q 026632 160 TQ---------------KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG----DGQLYVVDRI 220 (235)
Q Consensus 160 ~~---------------~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~----~g~~~~~GR~ 220 (235)
+. ..|+.|+.+||++++.. |+| .|++||++++.. ..++.+.||.
T Consensus 374 ~~~~~~~~~~~~~~v~l~eVe~G~~YelViTt~~---GL~--------------RYr~GD~v~v~~f~~~~p~i~~~gR~ 436 (609)
T 4b2g_A 374 HSSIPLSRDSPPRLVDLAHVEVGKEYELVITTYA---GLY--------------RYRVGDILRVTGFHNSAPQFHFVRRK 436 (609)
T ss_dssp GTTSCCCSSSCCCCEEGGGCCTTCEEEEEEECTT---SCC--------------SEEEEEEEEEEEEETTEEEEEEEEET
T ss_pred ccccccccCCCCccccHhHcCCCCeEEEehhhhh---hhh--------------heecCCEEEEeecCCCCcEEEEEEec
Confidence 32 35789999999998743 344 299999999863 4689999999
Q ss_pred CCceEeccEEeecC
Q 026632 221 KELIKYKGFQVTSN 234 (235)
Q Consensus 221 ~d~i~~~G~~v~p~ 234 (235)
++++++.|+||+++
T Consensus 437 ~~~l~~~Geki~~~ 450 (609)
T 4b2g_A 437 NVLLSIDSDKTDEA 450 (609)
T ss_dssp TCCBCSSSCCBCHH
T ss_pred CCeEEccccCCCHH
Confidence 99999999999874
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=98.51 E-value=1.6e-07 Score=80.72 Aligned_cols=125 Identities=17% Similarity=0.126 Sum_probs=77.9
Q ss_pred CCCce---EEEecccCCcHHHHHHHHHhCCCCcee-ccccccccccccccccCCCCCCCCCcc-cccCC-CcEEEEEeCC
Q 026632 86 LSSLK---LVGSGAAPLGKELMEECAKNVPSATVI-QGYGLTETSGIATMENSFAGSRNIGSA-GALAP-GVEALIVSVD 159 (235)
Q Consensus 86 l~~lr---~i~~~G~~~~~~~~~~~~~~~~~~~i~-~~yG~tE~g~~~~~~~~~~~~~~~~~~-g~p~~-~~~~~~~d~~ 159 (235)
-+++| .++.|+- ..-.+.++..+|+..+. ..|++||.. ++.-..+ ...++.. ...+| ....+.++.+
T Consensus 301 WPnl~~i~~~~~G~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~-~gi~~~p---~~~~~~~~~~L~p~~~ffEFiP~~ 373 (581)
T 4epl_A 301 FPNAKYVYGIMTGSM---EPYVPKLRHYAGDLPLVSHDYGSSEGW-IAANVTP---RLSPEEATFAVIPNLGYFEFLPVS 373 (581)
T ss_dssp CTTCCCEEEECSGGG---GGGHHHHHHHHTTSCEEECCEEETTEE-EEECCCT---TSCTTTCCEEECTTSCEEEEEEC-
T ss_pred CCCCceEEEEeCCCh---HHHHHHHHHHcCCCccccCceecccee-eeeecCC---CCCccccceeecCCcEEEEEEecc
Confidence 45665 4444433 23334555555667777 999999964 3332211 1111111 11222 2556666533
Q ss_pred CC----------ccCCCCCceEEEEEcCcccccccCCcccccccccCCCeEecCceEEEcC----CCcEEEEeccCCceE
Q 026632 160 TQ----------KPLPPNQLGEIWLRGPNMMRGYYNNEQATKLTIDKKGWVHTGDLGYFDG----DGQLYVVDRIKELIK 225 (235)
Q Consensus 160 ~~----------~~v~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~g~~~TgDl~~~~~----~g~~~~~GR~~d~i~ 225 (235)
+. ..|+.|+.+||++++.. |.| .|++||+.++.. ..++.+.||.+++++
T Consensus 374 ~~~~~~~~~v~l~eve~G~~YelviTt~~---GL~--------------RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~ 436 (581)
T 4epl_A 374 ETGEGEEKPVGLTQVKIGEEYEVVITNYA---GLY--------------RYRLGDVVKVIGFYNNTPQLKFICRRNLILS 436 (581)
T ss_dssp ------CCCEEGGGCCTTCEEEEEEESTT---SCS--------------SEEEEEEEEEEEEETTEEEEEEEEETTCCBC
T ss_pred cccCCCCceeeHHHcCCCCeEEEEEeecc---cee--------------eEEcCCEEEEecccCCCcEEEEEeecCCeEE
Confidence 21 46789999999999853 223 299999999853 257999999999999
Q ss_pred eccEEeecC
Q 026632 226 YKGFQVTSN 234 (235)
Q Consensus 226 ~~G~~v~p~ 234 (235)
+.|++++++
T Consensus 437 ~~Ge~~~~~ 445 (581)
T 4epl_A 437 INIDKNTER 445 (581)
T ss_dssp SSSCCBCHH
T ss_pred eeeeECCHH
Confidence 999999864
No 40
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=76.56 E-value=20 Score=26.41 Aligned_cols=91 Identities=19% Similarity=0.188 Sum_probs=55.1
Q ss_pred cEEEEecCh--hHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEee--cH----HH--HHHHHhcCCcC
Q 026632 14 YVFLCVLPL--FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV--VP----PL--ILALAKHGLVK 82 (235)
Q Consensus 14 d~~l~~~p~--~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~--~p----~~--~~~l~~~~~~~ 82 (235)
-+++...+- .|..|....-...-.+|-.++... ...++.+.+.+.+++++.+.. +- ++ +..+.+..+..
T Consensus 93 ~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~ 172 (215)
T 3ezx_A 93 GLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEE 172 (215)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHT
T ss_pred CeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHc
Confidence 455555543 388888544444456777776665 467999999999999997666 22 21 33333332222
Q ss_pred CCCCCCceEEEecccCCcHHHHHH
Q 026632 83 KFDLSSLKLVGSGAAPLGKELMEE 106 (235)
Q Consensus 83 ~~~l~~lr~i~~~G~~~~~~~~~~ 106 (235)
.. ..+++ ++.||.+++++..+.
T Consensus 173 ~~-~~~v~-v~vGG~~~~~~~a~~ 194 (215)
T 3ezx_A 173 KL-RDSVK-CMFGGAPVSDKWIEE 194 (215)
T ss_dssp TC-GGGSE-EEEESSSCCHHHHHH
T ss_pred CC-CCCCE-EEEECCCCCHHHHHH
Confidence 21 12444 677888999776544
No 41
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=47.36 E-value=77 Score=26.68 Aligned_cols=64 Identities=6% Similarity=-0.037 Sum_probs=50.5
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++..+++-+..+ ...+++.+..|+..+..+ ....+.+...+++.++..++..+.....
T Consensus 73 Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~ 137 (549)
T 3g7s_A 73 GVRKGEHVGVCIPNSIDY--VMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYEN 137 (549)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHH
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHH
Confidence 345779999988876554 457789999999999886 4678899999999999998887765443
No 42
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=44.56 E-value=83 Score=26.44 Aligned_cols=64 Identities=5% Similarity=-0.093 Sum_probs=50.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...+++.++..++..+.....
T Consensus 68 Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 132 (541)
T 1v25_A 68 GVGVGDRVATLGFNHFRH--LEAYFAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPL 132 (541)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred CCCCCCEEEEEcCCcHHH--HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHH
Confidence 345679999888866544 457788999999999885 4678899999999999999988765443
No 43
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=43.03 E-value=64 Score=23.36 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=51.8
Q ss_pred EEEEecCh--hHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH------HHHHHHhcCCcCCCC
Q 026632 15 VFLCVLPL--FHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP------LILALAKHGLVKKFD 85 (235)
Q Consensus 15 ~~l~~~p~--~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~------~~~~l~~~~~~~~~~ 85 (235)
+++...+- .|..|....-...-.+|-.++... ...++.+.+.+.+++++.+..+-. .+..+.+..+... .
T Consensus 90 ~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~-~ 168 (210)
T 1y80_A 90 KIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAG-L 168 (210)
T ss_dssp EEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTT-C
T ss_pred EEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcC-C
Confidence 45554443 577787443333346677777655 457899999999999987665432 2334433322221 1
Q ss_pred CCCceEEEecccCCcHHHH
Q 026632 86 LSSLKLVGSGAAPLGKELM 104 (235)
Q Consensus 86 l~~lr~i~~~G~~~~~~~~ 104 (235)
.++++ ++.||..++++..
T Consensus 169 ~~~~~-v~vGG~~~~~~~~ 186 (210)
T 1y80_A 169 RDRVK-VIVGGAPLSQDFA 186 (210)
T ss_dssp GGGCE-EEEESTTCCHHHH
T ss_pred CCCCe-EEEECCCCCHHHH
Confidence 12344 6668878876554
No 44
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=41.65 E-value=80 Score=26.37 Aligned_cols=62 Identities=11% Similarity=0.094 Sum_probs=48.1
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~ 72 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...+++.++..++..+...
T Consensus 69 Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 131 (529)
T 2v7b_A 69 GVHPEERILLVMLDTVAL--PVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALV 131 (529)
T ss_dssp TCCTTCEEEEECCSSTHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGH
T ss_pred CCCCCCEEEEEcCCcHHH--HHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhh
Confidence 345678999888866554 457788899999988875 46788899999999998888876543
No 45
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=41.42 E-value=83 Score=26.37 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=49.1
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~ 72 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...+++.++..++..+...
T Consensus 70 Gv~~gd~V~i~~~~~~~~--~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~ 132 (536)
T 3ni2_A 70 GIQQGDVIMLFLPSSPEF--VLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYY 132 (536)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGT
T ss_pred CCCCCCEEEEEcCCcHHH--HHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHH
Confidence 446679999888876554 457788999999998886 46788999999999999988876543
No 46
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=40.59 E-value=79 Score=26.84 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=49.4
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...++..++..++..+.....
T Consensus 95 Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 159 (570)
T 3c5e_A 95 GLQRGDRVAVVLPRVPEW--WLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQE 159 (570)
T ss_dssp CCCTTCEEEEECCSCHHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHH
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHH
Confidence 445779999988866554 457788999999998876 4678889999999999988887654443
No 47
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=40.42 E-value=96 Score=25.70 Aligned_cols=64 Identities=2% Similarity=-0.111 Sum_probs=50.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++..+++-+..+ ...+++.+..|+..+..+ ....+.+...+++.++..++..+.....
T Consensus 52 Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 116 (509)
T 3ivr_A 52 GVHTGDRVAILSQNCSEM--IELIGAVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDI 116 (509)
T ss_dssp TCCTTCEEEEECCSCHHH--HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHH
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECcchhhh
Confidence 345679999888876554 457889999999999886 4678899999999999999987765444
No 48
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=39.84 E-value=76 Score=26.73 Aligned_cols=65 Identities=11% Similarity=0.076 Sum_probs=50.6
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...++..++..++........+
T Consensus 71 Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 136 (550)
T 3rix_A 71 GLNTNHRIVVCSENSLQF--FMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKI 136 (550)
T ss_dssp TCCTTCEEEEECSSCTTT--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHH
T ss_pred CCCCCCEEEEEcCCcccH--HHHHHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHH
Confidence 445679999888865443 457788999999999875 46789999999999999998887654433
No 49
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=36.49 E-value=1.2e+02 Score=25.23 Aligned_cols=61 Identities=8% Similarity=0.046 Sum_probs=48.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPL 71 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~ 71 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...+++.++..++..+..
T Consensus 64 Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~ 125 (517)
T 3r44_A 64 GIAKGDRVALLMPNSVEF--CCLFYGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPS 125 (517)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGG
T ss_pred CCCCcCEEEEEcCCCHHH--HHHHHHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCch
Confidence 345679999998876554 457789999999999886 4678889999999999988876543
No 50
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=36.10 E-value=80 Score=26.60 Aligned_cols=62 Identities=10% Similarity=0.026 Sum_probs=48.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLI 72 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~ 72 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+++...+++.++..++..+...
T Consensus 73 Gv~~gd~V~i~~~n~~e~--~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 135 (548)
T 2d1s_A 73 GLVVDGRIALCSENCEEF--FIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGL 135 (548)
T ss_dssp TCCTTCEEEEECSSCTTT--HHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTH
T ss_pred CCCCCCEEEEEeCCchhH--HHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHH
Confidence 345679998888866543 357788889999988876 46788999999999999888876543
No 51
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=35.93 E-value=96 Score=26.99 Aligned_cols=60 Identities=7% Similarity=0.006 Sum_probs=48.2
Q ss_pred ccCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 8 TAGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 8 ~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
.+..++|++..++|..... ...+++++..|+..+... .+..+.+...+++.++.+++...
T Consensus 134 ~Gv~~Gd~V~i~~~~~~e~--v~a~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 194 (663)
T 1ry2_A 134 MGVRKGDTVAVYMPMVPEA--IITLLAISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTD 194 (663)
T ss_dssp SCCCTTCEEEECCCSSHHH--HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEES
T ss_pred cCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEcc
Confidence 3456779999999987665 357788888999888875 57899999999999999888754
No 52
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=34.95 E-value=1.3e+02 Score=25.01 Aligned_cols=60 Identities=8% Similarity=0.007 Sum_probs=48.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..+++-+..+ ...+++.+..|+..+..+ ....+.+...+++.++..++..+.
T Consensus 49 Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~ 109 (503)
T 4fuq_A 49 GLQVGDRVAAQTEKSVEA--LVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVVCDPS 109 (503)
T ss_dssp TCCTTCEEEEECCSCHHH--HHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGG
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEEECch
Confidence 445679999888877554 457889999999999886 467889999999999999888764
No 53
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=32.39 E-value=1.4e+02 Score=24.66 Aligned_cols=56 Identities=5% Similarity=-0.059 Sum_probs=45.4
Q ss_pred CCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 12 LDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 12 ~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...+++.++..++...
T Consensus 47 ~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 103 (501)
T 3ipl_A 47 QQSRVGLYIDNSIQS--IILIHACWLANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTL 103 (501)
T ss_dssp CCSEEEEECCSSHHH--HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHTTCCEEEESS
T ss_pred CCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecCccCCHHHHHHHHHhcCCCEEEEcc
Confidence 678999888866554 457889999999999886 46789999999999998887653
No 54
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=32.09 E-value=1.5e+02 Score=24.44 Aligned_cols=65 Identities=11% Similarity=0.038 Sum_probs=48.1
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEee--cHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWV--VPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~--~p~~~~~l 75 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...+++.++..++. .+.....+
T Consensus 50 Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 50 GLRPQQRVAVVAPNSADV--VIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TCCTTCEEEEECCSCHHH--HHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHHhCcEEEecCCccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 345679999888866554 457788899999998875 467889999999999998887 55444433
No 55
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=32.00 E-value=1.6e+02 Score=24.96 Aligned_cols=63 Identities=8% Similarity=0.047 Sum_probs=49.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPPLIL 73 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~ 73 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...++..++..++..+....
T Consensus 85 Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~ 148 (563)
T 1amu_A 85 GIGKDTLVGIMMEKSIDL--FIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVH 148 (563)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHH
T ss_pred CCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhh
Confidence 345679998888866544 457788999999999886 467889999999999999988775443
No 56
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=31.72 E-value=1.2e+02 Score=26.24 Aligned_cols=59 Identities=14% Similarity=0.058 Sum_probs=46.8
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..++|-...+ ...+++++..|+..+... .+.++.+...+++.++..++...
T Consensus 128 Gv~~Gd~V~i~~~~~~e~--vva~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 128 GIKKGDVVAIYMPMVPEA--AVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEES
T ss_pred CCCCCCEEEEEeCCCHHH--HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 446779999999987665 357788888899888875 57899999999998888877643
No 57
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=30.12 E-value=1.1e+02 Score=23.15 Aligned_cols=86 Identities=13% Similarity=0.169 Sum_probs=51.7
Q ss_pred cEEEEecC--hhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecHH------HHHHHHhcCCcCCC
Q 026632 14 YVFLCVLP--LFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVPP------LILALAKHGLVKKF 84 (235)
Q Consensus 14 d~~l~~~p--~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p~------~~~~l~~~~~~~~~ 84 (235)
-+++...+ =.|..|....-...-..|-.++... ...++.+.+.+.+++++.+..+-. .+..+.+..+...
T Consensus 124 ~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~- 202 (258)
T 2i2x_B 124 GTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENG- 202 (258)
T ss_dssp CEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTT-
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcC-
Confidence 34555544 3577787444444446777776554 567899999999999987765432 2444444332222
Q ss_pred CCCCceEEEecccCCcHHH
Q 026632 85 DLSSLKLVGSGAAPLGKEL 103 (235)
Q Consensus 85 ~l~~lr~i~~~G~~~~~~~ 103 (235)
..+ .++.||..++++.
T Consensus 203 --~~~-~v~vGG~~~~~~~ 218 (258)
T 2i2x_B 203 --IKI-PFACGGGAVNQDF 218 (258)
T ss_dssp --CCC-CEEEESTTCCHHH
T ss_pred --CCC-cEEEECccCCHHH
Confidence 123 3666887887654
No 58
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=28.67 E-value=1.4e+02 Score=25.47 Aligned_cols=59 Identities=14% Similarity=0.024 Sum_probs=47.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..+++-+..+ +..+++++..|+..+... .+..+.+...+++.++..++..+
T Consensus 107 Gv~~Gd~V~l~~~~~~e~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 107 GIGKGDYVMLTLKSRYDF--WYCMLGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp TCCTTCEEEEECTTCTHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCCCEEEEEcCCCHHH--HHHHHHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEec
Confidence 456779999998866554 467889999999999875 46788999999999999888754
No 59
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=27.95 E-value=1.8e+02 Score=24.60 Aligned_cols=60 Identities=13% Similarity=0.087 Sum_probs=47.7
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CCHHHHHHHHHhccceEEeecHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FDLEMFLRAIEKHRVTHIWVVPP 70 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~~~~~~~~l~~~~~t~~~~~p~ 70 (235)
+..++|++..+++-+..+ ...+++++..|+..+...+ ...+.+...+++.++..++....
T Consensus 121 Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~ 181 (570)
T 4gr5_A 121 GVAPGTLVGVHLERGFDM--VVALLAVLKAGGGYTMLDPQFPVERLALSLEDTGAPLLVTSRP 181 (570)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTT
T ss_pred CCCCCCEEEEEeCCCHHH--HHHHHHHHHHCCEEEEcCCCChHHHHHHHHHhcCCCEEEecch
Confidence 345679999988876654 4578899999999998864 67889999999999988887654
No 60
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=25.73 E-value=1.3e+02 Score=24.43 Aligned_cols=65 Identities=12% Similarity=0.058 Sum_probs=49.6
Q ss_pred CCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC----CCHHHHHHHHHhccceEEeecHHHHHHHHh
Q 026632 11 ELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK----FDLEMFLRAIEKHRVTHIWVVPPLILALAK 77 (235)
Q Consensus 11 ~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 77 (235)
.++|++..+++-+..+ ...+++++..|+..+.... ...+.+...+++.++..++..+.....+.+
T Consensus 80 ~~gd~V~i~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 80 STGDRVVISAPQGLEY--VVAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp CTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCCEEEEEcCCcHHH--HHHHHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 3678998888866554 4577899999999998753 356788888999999999988776555443
No 61
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=25.61 E-value=1.7e+02 Score=24.56 Aligned_cols=59 Identities=12% Similarity=0.019 Sum_probs=46.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..+++-+..+ ...+++++..|+..+... ....+.+...+++.++..++...
T Consensus 76 Gv~~gd~V~i~~~n~~~~--~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 135 (544)
T 3o83_A 76 GLGKGDTALVQLPNVAEF--YIVFFALLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSR 135 (544)
T ss_dssp TCCTTCEEEECCCSSHHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEEET
T ss_pred CCCCCCEEEEECCCCHHH--HHHHHHHHHhCcEEecCCCCCCHHHHHHHHHhcCeeEEEEcc
Confidence 445779999888866544 457788999999988765 46788899999999999888765
No 62
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=25.57 E-value=1.6e+02 Score=24.40 Aligned_cols=59 Identities=15% Similarity=-0.004 Sum_probs=45.3
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...++..++..++...
T Consensus 50 g~~~gd~V~i~~~n~~~~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii~~~ 109 (521)
T 3l8c_A 50 ALLAKSPVLVFGAQTYDM--LATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLIIAIE 109 (521)
T ss_dssp CCCTTCCEEEEECSSHHH--HHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEEESS
T ss_pred CCCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCEEEecC
Confidence 345678888887766543 457788889999888875 56789999999999998887654
No 63
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=25.12 E-value=2.6e+02 Score=23.51 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=49.2
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccCC----CHHHHHHHHHhccceEEeecHHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAKF----DLEMFLRAIEKHRVTHIWVVPPLILAL 75 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~~----~~~~~~~~l~~~~~t~~~~~p~~~~~l 75 (235)
+..++|++..+++-+..+ ...+++++..|+..+...+. ..+.+...++..++..++..+.....+
T Consensus 61 gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 129 (590)
T 3kxw_A 61 GAKPGDRVLLLFAPGLPL--IQAFLGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKF 129 (590)
T ss_dssp TCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHH
T ss_pred CCCCCCEEEEEcCCchhH--HHHHHHHHHhCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 345779999998876554 45778999999999987653 346677788888999998888766554
No 64
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=23.61 E-value=2e+02 Score=23.99 Aligned_cols=59 Identities=8% Similarity=0.004 Sum_probs=46.0
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeecH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVVP 69 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~p 69 (235)
+..++|++..+++-+..+ ...+++++..|+..+... ....+.+...++..++..++..+
T Consensus 71 Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~ 130 (539)
T 1mdb_A 71 GIQQKDRVVVQLPNIKEF--FEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPD 130 (539)
T ss_dssp TCCTTCEEEECCCSSHHH--HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEES
T ss_pred CCCCCCEEEEEcCCcHHH--HHHHHHHHHcCeEEecCCCCCCHHHHHHHHHhCCCCEEEecc
Confidence 345679999888866544 457788899999888765 46788899999999999887754
No 65
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=22.35 E-value=2.2e+02 Score=23.47 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=43.7
Q ss_pred CCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEcc-CCCHHHHHHHHHhccceEEeec
Q 026632 10 GELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMA-KFDLEMFLRAIEKHRVTHIWVV 68 (235)
Q Consensus 10 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~-~~~~~~~~~~l~~~~~t~~~~~ 68 (235)
..++|++..+++-+..+ ...+++++..|+..+..+ ....+.+...++..++..++..
T Consensus 48 ~~~gd~V~i~~~n~~e~--~~~~la~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~~i~~ 105 (512)
T 3fce_A 48 PDDRSPIMVYGHMQPEM--IINFLGCVKAGHAYIPVDLSIPADRVQRIAENSGAKLLLSA 105 (512)
T ss_dssp TTCCCCEEEEESSCHHH--HHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCCEEEES
T ss_pred CCCCCEEEEEeCCCHHH--HHHHHHHHHhCCEEEeeCCCCcHHHHHHHHHhcCCCEEEec
Confidence 45668888887765543 457788899999888875 4678899999999998887764
No 66
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=20.99 E-value=2.8e+02 Score=23.17 Aligned_cols=64 Identities=6% Similarity=-0.104 Sum_probs=48.1
Q ss_pred cCCCCcEEEEecChhHHHhHHHHHHHHhhcCcEEEEccC-CC-------HHHHHHHHHhccceEEeecHHHHHH
Q 026632 9 AGELDYVFLCVLPLFHVFGLAVITCGQLQKGSCIILMAK-FD-------LEMFLRAIEKHRVTHIWVVPPLILA 74 (235)
Q Consensus 9 ~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~v~~~~-~~-------~~~~~~~l~~~~~t~~~~~p~~~~~ 74 (235)
+..++|++..+++-+..+ ...+++++..|+..+..+. +. .+.+...++..++..++........
T Consensus 70 Gv~~gd~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 141 (576)
T 3gqw_A 70 NLKKGDRVALIAETSSEF--VEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPL 141 (576)
T ss_dssp CCCTTCEEEEECCSSHHH--HHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHH
T ss_pred CCCCCCEEEEEcCCcHHH--HHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHH
Confidence 345779999998876654 4577899999999988753 33 5778888899999988887764443
Done!