Query 026636
Match_columns 235
No_of_seqs 161 out of 1272
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 10:37:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026636.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026636hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK12897 methionine aminopepti 100.0 1.6E-57 3.5E-62 371.2 27.1 235 1-235 13-248 (248)
2 PLN03158 methionine aminopepti 100.0 1.2E-56 2.7E-61 383.2 27.0 234 1-234 146-380 (396)
3 TIGR00500 met_pdase_I methioni 100.0 5.3E-56 1.1E-60 362.5 28.7 234 1-234 12-246 (247)
4 PRK07281 methionine aminopepti 100.0 1.9E-56 4.2E-61 368.9 25.8 235 1-235 13-280 (286)
5 PRK05716 methionine aminopepti 100.0 1.7E-55 3.7E-60 360.6 28.3 235 1-235 14-249 (252)
6 PRK12318 methionine aminopepti 100.0 1.7E-55 3.7E-60 365.3 27.6 235 1-235 52-289 (291)
7 PRK12896 methionine aminopepti 100.0 3.5E-55 7.6E-60 359.3 28.4 234 1-234 19-254 (255)
8 cd01086 MetAP1 Methionine Amin 100.0 1.1E-54 2.3E-59 353.0 28.6 234 1-234 4-238 (238)
9 COG0024 Map Methionine aminope 100.0 1E-52 2.2E-57 336.0 27.8 234 1-234 14-251 (255)
10 KOG2738 Putative methionine am 100.0 1.7E-53 3.7E-58 337.6 21.4 235 1-235 125-360 (369)
11 cd01090 Creatinase Creatine am 100.0 1.5E-52 3.3E-57 337.3 24.8 221 1-234 4-228 (228)
12 PRK09795 aminopeptidase; Provi 100.0 6E-52 1.3E-56 355.5 23.7 210 1-235 136-351 (361)
13 cd01087 Prolidase Prolidase. E 100.0 1E-51 2.2E-56 336.5 23.3 220 1-234 4-243 (243)
14 COG0006 PepP Xaa-Pro aminopept 100.0 5E-51 1.1E-55 352.6 22.6 209 1-234 163-375 (384)
15 PRK15173 peptidase; Provisiona 100.0 1.4E-48 3E-53 329.0 24.6 209 1-235 104-315 (323)
16 cd01092 APP-like Similar to Pr 100.0 1.9E-48 4.2E-53 310.1 23.9 204 1-229 4-208 (208)
17 PRK10879 proline aminopeptidas 100.0 1.3E-48 2.8E-53 341.1 24.9 218 1-234 182-419 (438)
18 TIGR02993 ectoine_eutD ectoine 100.0 2.3E-48 4.9E-53 336.1 21.9 212 1-235 167-383 (391)
19 PRK14575 putative peptidase; P 100.0 6.7E-48 1.5E-52 334.3 24.5 209 1-235 187-398 (406)
20 PRK14576 putative endopeptidas 100.0 1.1E-47 2.3E-52 332.9 24.6 209 1-235 186-397 (405)
21 cd01085 APP X-Prolyl Aminopept 100.0 4.4E-47 9.6E-52 304.4 21.1 206 4-232 9-222 (224)
22 PF00557 Peptidase_M24: Metall 100.0 8.4E-47 1.8E-51 300.5 22.0 202 1-226 3-207 (207)
23 cd01091 CDC68-like Related to 100.0 7.4E-46 1.6E-50 300.4 20.9 224 1-234 4-243 (243)
24 PRK13607 proline dipeptidase; 100.0 6.3E-45 1.4E-49 317.4 22.1 227 1-234 170-438 (443)
25 cd01066 APP_MetAP A family inc 100.0 1.9E-44 4.2E-49 285.9 22.4 203 1-229 4-207 (207)
26 PRK08671 methionine aminopepti 100.0 6.1E-44 1.3E-48 296.7 26.2 223 1-234 5-291 (291)
27 cd01089 PA2G4-like Related to 100.0 5.8E-44 1.3E-48 287.9 23.5 211 1-234 4-228 (228)
28 cd01088 MetAP2 Methionine Amin 100.0 4.1E-43 8.8E-48 291.8 26.3 223 1-234 4-291 (291)
29 TIGR00501 met_pdase_II methion 100.0 9.2E-43 2E-47 289.8 26.0 223 1-234 8-295 (295)
30 PTZ00053 methionine aminopepti 100.0 1.8E-42 4E-47 298.5 24.3 225 1-234 161-466 (470)
31 TIGR00495 crvDNA_42K 42K curve 100.0 1E-41 2.2E-46 292.1 27.8 232 1-234 22-336 (389)
32 KOG2414 Putative Xaa-Pro amino 100.0 6.2E-40 1.3E-44 270.6 14.4 216 1-234 237-471 (488)
33 KOG2737 Putative metallopeptid 100.0 4E-36 8.8E-41 245.9 14.6 230 1-234 194-466 (492)
34 KOG2413 Xaa-Pro aminopeptidase 99.9 2.2E-25 4.8E-30 192.9 17.0 206 2-230 322-537 (606)
35 KOG2775 Metallopeptidase [Gene 99.9 2.9E-25 6.3E-30 177.2 16.3 229 1-234 88-393 (397)
36 KOG1189 Global transcriptional 99.9 4.9E-24 1.1E-28 187.5 14.3 217 1-235 146-378 (960)
37 KOG2776 Metallopeptidase [Gene 99.8 1.7E-18 3.7E-23 141.8 18.7 231 2-234 25-339 (398)
38 COG5406 Nucleosome binding fac 99.7 5.1E-16 1.1E-20 135.2 11.8 172 49-235 243-418 (1001)
39 cd01086 MetAP1 Methionine Amin 97.9 0.0002 4.4E-09 58.0 11.7 101 105-226 2-105 (238)
40 PLN03158 methionine aminopepti 97.7 0.0004 8.6E-09 60.4 11.0 116 90-226 127-247 (396)
41 cd01088 MetAP2 Methionine Amin 97.7 0.00051 1.1E-08 57.5 11.1 97 105-226 2-100 (291)
42 PRK05716 methionine aminopepti 97.7 0.0011 2.3E-08 54.2 12.0 102 106-226 13-115 (252)
43 PRK12896 methionine aminopepti 97.6 0.0013 2.7E-08 53.9 11.7 112 94-226 4-120 (255)
44 cd01066 APP_MetAP A family inc 97.6 0.0013 2.9E-08 51.4 11.4 100 1-102 104-204 (207)
45 cd01092 APP-like Similar to Pr 97.5 0.0025 5.5E-08 50.2 11.3 97 2-101 106-204 (208)
46 COG0024 Map Methionine aminope 97.5 0.003 6.5E-08 51.4 11.7 86 106-193 13-101 (255)
47 TIGR00500 met_pdase_I methioni 97.4 0.0035 7.6E-08 51.0 11.6 98 2-102 119-238 (247)
48 cd01091 CDC68-like Related to 97.3 0.0029 6.2E-08 51.6 9.9 99 2-102 122-234 (243)
49 cd01090 Creatinase Creatine am 97.3 0.0057 1.2E-07 49.3 11.5 98 2-102 112-220 (228)
50 PRK15173 peptidase; Provisiona 97.2 0.0049 1.1E-07 52.4 11.1 100 2-102 205-306 (323)
51 PF00557 Peptidase_M24: Metall 97.2 0.0078 1.7E-07 47.5 11.0 98 105-225 1-99 (207)
52 PRK14575 putative peptidase; P 97.1 0.0072 1.6E-07 53.0 11.1 98 2-102 288-389 (406)
53 PRK12897 methionine aminopepti 97.0 0.0061 1.3E-07 49.8 9.6 98 2-102 120-239 (248)
54 PRK14576 putative endopeptidas 97.0 0.012 2.6E-07 51.6 11.8 100 2-102 287-388 (405)
55 TIGR02993 ectoine_eutD ectoine 97.0 0.008 1.7E-07 52.5 10.4 97 2-102 273-374 (391)
56 PRK07281 methionine aminopepti 97.0 0.008 1.7E-07 50.1 9.8 97 2-101 151-270 (286)
57 PRK09795 aminopeptidase; Provi 97.0 0.013 2.8E-07 50.6 11.5 98 2-102 243-342 (361)
58 TIGR00495 crvDNA_42K 42K curve 96.9 0.018 3.8E-07 50.2 12.0 103 106-226 21-130 (389)
59 PRK08671 methionine aminopepti 96.9 0.021 4.5E-07 47.9 12.0 95 2-101 104-205 (291)
60 TIGR00501 met_pdase_II methion 96.9 0.018 4E-07 48.2 11.4 96 106-226 7-104 (295)
61 PRK12318 methionine aminopepti 96.8 0.016 3.5E-07 48.5 10.6 84 2-88 161-247 (291)
62 cd01089 PA2G4-like Related to 96.8 0.037 8.1E-07 44.5 12.2 103 106-226 3-112 (228)
63 cd01087 Prolidase Prolidase. E 96.7 0.023 4.9E-07 46.2 10.4 100 2-102 106-235 (243)
64 KOG2738 Putative methionine am 96.7 0.013 2.8E-07 48.2 8.3 85 106-193 124-211 (369)
65 COG0006 PepP Xaa-Pro aminopept 96.4 0.041 8.8E-07 47.9 10.4 98 2-102 265-367 (384)
66 PTZ00053 methionine aminopepti 95.9 0.1 2.3E-06 46.3 10.4 98 107-225 161-262 (470)
67 PRK10879 proline aminopeptidas 95.2 0.33 7.2E-06 43.1 11.5 100 2-102 285-411 (438)
68 cd01085 APP X-Prolyl Aminopept 94.4 1.1 2.3E-05 36.0 11.4 96 2-101 114-215 (224)
69 PRK13607 proline dipeptidase; 92.9 1.4 3.1E-05 39.2 10.5 87 3-89 272-391 (443)
70 KOG2775 Metallopeptidase [Gene 91.9 1.5 3.2E-05 36.5 8.6 85 105-193 86-175 (397)
71 KOG2776 Metallopeptidase [Gene 90.7 1.4 3E-05 37.6 7.4 94 106-228 23-134 (398)
72 PF07305 DUF1454: Protein of u 85.8 6.7 0.00015 30.4 7.7 75 103-190 113-187 (200)
73 cd01666 TGS_DRG_C TGS_DRG_C: 84.5 4 8.6E-05 26.7 5.3 52 19-81 21-73 (75)
74 KOG1189 Global transcriptional 82.1 5.6 0.00012 37.4 7.0 99 3-102 261-368 (960)
75 PF00254 FKBP_C: FKBP-type pep 70.4 9.9 0.00021 25.5 4.3 51 70-129 2-59 (94)
76 COG5406 Nucleosome binding fac 64.5 24 0.00053 32.7 6.5 72 9-84 308-384 (1001)
77 COG0414 PanC Panthothenate syn 54.5 30 0.00066 28.6 4.9 56 88-147 182-238 (285)
78 cd04938 TGS_Obg-like TGS_Obg-l 53.1 27 0.00058 22.8 3.7 47 19-81 28-74 (76)
79 PRK01490 tig trigger factor; P 47.6 85 0.0018 27.8 7.2 57 22-102 131-191 (435)
80 PF02829 3H: 3H domain; Inter 47.3 64 0.0014 22.3 5.0 68 78-147 22-96 (98)
81 PF05184 SapB_1: Saposin-like 47.0 29 0.00062 18.9 2.8 34 4-37 3-36 (39)
82 PF04355 SmpA_OmlA: SmpA / Oml 44.2 17 0.00037 23.1 1.7 19 14-32 7-25 (71)
83 PF11020 DUF2610: Domain of un 41.7 52 0.0011 21.7 3.6 61 81-148 4-67 (82)
84 COG1163 DRG Predicted GTPase [ 41.0 82 0.0018 27.0 5.6 52 19-81 310-362 (365)
85 PLN02660 pantoate--beta-alanin 39.8 80 0.0017 26.4 5.4 57 88-148 186-243 (284)
86 cd01669 TGS_Ygr210_C TGS_Ygr21 38.8 93 0.002 20.3 4.6 48 19-81 27-74 (76)
87 TIGR00115 tig trigger factor. 38.1 1.4E+02 0.003 26.2 7.0 57 22-102 119-180 (408)
88 TIGR03147 cyt_nit_nrfF cytochr 37.0 49 0.0011 24.0 3.3 34 5-41 56-89 (126)
89 PF12631 GTPase_Cys_C: Catalyt 36.7 76 0.0016 20.3 3.9 42 103-144 10-51 (73)
90 PF03477 ATP-cone: ATP cone do 35.2 33 0.00072 22.8 2.1 33 9-41 38-74 (90)
91 TIGR00018 panC pantoate--beta- 33.4 1.1E+02 0.0024 25.6 5.2 57 88-148 183-240 (282)
92 TIGR03516 ppisom_GldI peptidyl 33.4 1.3E+02 0.0028 23.2 5.3 52 70-130 83-140 (177)
93 KOG2414 Putative Xaa-Pro amino 32.4 3.3E+02 0.0072 24.3 7.9 97 6-105 344-466 (488)
94 PRK00464 nrdR transcriptional 32.3 1.5E+02 0.0033 22.3 5.4 39 5-43 85-123 (154)
95 PRK10144 formate-dependent nit 31.8 67 0.0014 23.3 3.2 34 5-41 56-89 (126)
96 PF11399 DUF3192: Protein of u 31.1 1.1E+02 0.0024 21.3 4.1 41 97-138 4-44 (102)
97 PRK09812 toxin ChpB; Provision 28.0 42 0.00091 23.8 1.7 30 71-100 5-34 (116)
98 KOG2611 Neurochondrin/leucine- 27.8 16 0.00034 32.9 -0.6 69 76-144 584-662 (698)
99 PF04363 DUF496: Protein of un 26.9 1.1E+02 0.0025 20.6 3.4 27 11-37 37-63 (95)
100 PF09958 DUF2192: Uncharacteri 26.4 1.6E+02 0.0034 23.8 4.8 44 105-150 4-47 (231)
101 PF06135 DUF965: Bacterial pro 25.4 35 0.00077 22.5 0.8 38 130-170 16-53 (79)
102 PF02824 TGS: TGS domain; Int 25.1 65 0.0014 19.8 2.0 46 19-81 13-58 (60)
103 cd00560 PanC Pantoate-beta-ala 24.9 1.5E+02 0.0032 24.8 4.6 54 92-148 184-238 (277)
104 PRK05423 hypothetical protein; 24.7 1.3E+02 0.0028 20.6 3.4 28 11-38 44-71 (104)
105 COG4001 Predicted metal-bindin 24.7 1.9E+02 0.0042 19.5 4.2 37 3-41 56-92 (102)
106 COG4387 Mu-like prophage prote 24.3 8.5 0.00018 27.6 -2.4 37 87-123 65-102 (139)
107 PRK06646 DNA polymerase III su 22.9 3.3E+02 0.0072 20.4 5.8 100 2-110 16-125 (154)
108 COG3642 Mn2+-dependent serine/ 22.8 2.2E+02 0.0048 22.5 4.9 23 63-85 113-137 (204)
109 KOG3042 Panthothenate syntheta 22.6 1.9E+02 0.0041 23.2 4.5 53 93-148 189-242 (283)
110 PF05225 HTH_psq: helix-turn-h 21.8 97 0.0021 17.8 2.2 24 9-32 2-26 (45)
111 COG3140 Uncharacterized protei 21.8 1.4E+02 0.003 18.2 2.8 31 9-39 14-44 (60)
112 PRK11507 ribosome-associated p 20.8 73 0.0016 20.5 1.6 15 69-83 49-63 (70)
113 PF03701 UPF0181: Uncharacteri 20.6 2E+02 0.0044 17.2 3.3 31 9-39 14-44 (51)
114 PRK06765 homoserine O-acetyltr 20.4 72 0.0016 27.9 2.0 34 127-160 139-172 (389)
115 PF11439 CesA: Type III secret 20.2 1.4E+02 0.003 19.5 2.7 30 104-133 64-93 (95)
116 KOG0064 Peroxisomal long-chain 20.1 1.1E+02 0.0024 28.3 3.1 24 165-192 487-510 (728)
No 1
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.6e-57 Score=371.20 Aligned_cols=235 Identities=37% Similarity=0.631 Sum_probs=219.1
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....++.+|++++++|.|+..+|+.|++++|++||+|+
T Consensus 13 ~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~~~~l~~Gd~V~ 92 (248)
T PRK12897 13 MHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPADVPLTEGDIVT 92 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCCCcccCCCCEEE
Confidence 69999999999999999999999999999999999999998764444567888899999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
+|+++.++||++|++|||++|+|+++++++|+.+.++++++++.+|||++++||++++++++++.||....+++|||||+
T Consensus 93 iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~~~~~GHgiGl 172 (248)
T PRK12897 93 IDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVARDFTGHGIGK 172 (248)
T ss_pred EEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccCCCeEECccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999778999999999
Q ss_pred ccccCCeEeccc-CCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 161 VFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 161 ~~~e~p~~~~~~-~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
.+||.|.+..+. .+++.+|+|||||++||++|.+......+.++|++.+.+|.+|+|+||||+||++|+|+||+.
T Consensus 173 ~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G~e~lt~~ 248 (248)
T PRK12897 173 EIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDGPIILTKL 248 (248)
T ss_pred cccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCccEEeecC
Confidence 999999986432 356789999999999999998877777778999999889999999999999999999999963
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.2e-56 Score=383.16 Aligned_cols=234 Identities=54% Similarity=0.953 Sum_probs=221.9
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+++.+.++|+++..+++.+|+..+++|.|+..+|+.|++++|++||+|.
T Consensus 146 mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~ 225 (396)
T PLN03158 146 MRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVN 225 (396)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEE
Confidence 79999999999999999999999999999999999999999998888888999999999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
+|+++.++||++|++|||++|++++++++++++++++++++++.+|||++++||.+++++++++.||..+.+++|||||+
T Consensus 226 iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~ 305 (396)
T PLN03158 226 VDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGE 305 (396)
T ss_pred EEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888999999999
Q ss_pred ccccCCeEecccC-CCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 161 VFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 161 ~~~e~p~~~~~~~-~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
.+||.|.+.++.. +...+|+|||||+|||+++.+......|+|+|+.++.+|..++|+||||+||++|+|+||.
T Consensus 306 ~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~ 380 (396)
T PLN03158 306 LFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTA 380 (396)
T ss_pred ccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEEEeCCcceECCC
Confidence 9999999876532 2347999999999999999877666789999999999999999999999999999999996
No 3
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=5.3e-56 Score=362.52 Aligned_cols=234 Identities=49% Similarity=0.815 Sum_probs=219.0
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+++.+.+.|+++....+.+|++.+++|.|+..+|+.|++++|++||+|+
T Consensus 12 ~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~~~l~~Gd~v~ 91 (247)
T TIGR00500 12 IRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDKKVLKDGDIVN 91 (247)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCCcccCCCCEEE
Confidence 69999999999999999999999999999999999999998876555567888889999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
+|+++.|+||++|++||+++|+|+++++++|+++.++++++++.+|||++++||++++++++++.|+....+++|||+|+
T Consensus 92 iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~~~~~GHgiG~ 171 (247)
T TIGR00500 92 IDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVVREYCGHGIGR 171 (247)
T ss_pred EEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEeccCccCCccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877889999999
Q ss_pred ccccCCeEeccc-CCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 161 VFHADPVVLHYR-NNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 161 ~~~e~p~~~~~~-~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
.+||.|.+..+. .+++.+|++||||+|||++|.+..+...++++|++..+++.+|+|+||||+||++|+|+||.
T Consensus 172 ~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~e~Lt~ 246 (247)
T TIGR00500 172 KFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGPEILTE 246 (247)
T ss_pred ccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCccEEccC
Confidence 999999876442 34678999999999999999988877777889999888999999999999999999999996
No 4
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.9e-56 Score=368.91 Aligned_cols=235 Identities=31% Similarity=0.552 Sum_probs=215.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCC----CCCCCeeeecCCCccccCCCCCcCCCCC
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECICHGIPDSRALEDG 76 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~----~~~~~~v~~g~~~~~~h~~~~~~~l~~G 76 (235)
||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.+...++ .+||+++++|.|+..+|+.|++++|++|
T Consensus 13 mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H~~p~~~~l~~G 92 (286)
T PRK07281 13 MDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAHAFPRHYILKEG 92 (286)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccCCCCCCcCcCCC
Confidence 799999999999999999999999999999999999999987654432 4689999999999999999999999999
Q ss_pred CeEEEEEee---------------------------eeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCC
Q 026636 77 DTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 129 (235)
Q Consensus 77 d~v~id~~~---------------------------~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~ 129 (235)
|+|++|+++ .|+||++|++|||++|+|+++++++|+.++++++++++.+|||+
T Consensus 93 d~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kpG~ 172 (286)
T PRK07281 93 DLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAMYRGIEQAVVGN 172 (286)
T ss_pred CEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999997 48999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHhhhcCCceEeeccceeccccccccCCeEecc-cCCCCCcccCCcEEEEeeEEEcCCCCee-ecCCCceE
Q 026636 130 EYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSINPV-MWDDNWTI 207 (235)
Q Consensus 130 ~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~~~~-~~~~~~~l~~gmv~~iep~~~~~~~~~~-~~~~~~~~ 207 (235)
+++||++++++++++.||..+.+++|||||+.+||.|.+..+ .++++.+|+|||||+|||++|.+..... ..+++|++
T Consensus 173 ~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~~~~~~~~gw~~ 252 (286)
T PRK07281 173 RIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAH 252 (286)
T ss_pred cHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcceecccCCCceE
Confidence 999999999999999999977789999999999999988644 2356789999999999999998655443 35789999
Q ss_pred EecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 208 VTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 208 ~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
++.+|..++|+||||+||++|+|+||.+
T Consensus 253 ~~~~g~~gvr~EdtvlVT~~G~e~LT~~ 280 (286)
T PRK07281 253 KTLDGGLSCQYEHQFVITKDGPVILTSQ 280 (286)
T ss_pred EecCCCcEEEeccEEEEeCCcceECCCC
Confidence 9999999999999999999999999963
No 5
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=1.7e-55 Score=360.60 Aligned_cols=235 Identities=51% Similarity=0.870 Sum_probs=220.2
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+.+..+.+|++.+++|.|+..+|+.|++++|++||+|+
T Consensus 14 ~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~~~~l~~Gd~v~ 93 (252)
T PRK05716 14 MRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPSDKVLKEGDIVN 93 (252)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCCCcccCCCCEEE
Confidence 69999999999999999999999999999999999999998766555567888888999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
+|+++.++||++|++||+++|+|+++++++|+.+.++++++++.+|||++++||++++++++++.|+....+++|||||+
T Consensus 94 id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~~~~~GHgiG~ 173 (252)
T PRK05716 94 IDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVVREYCGHGIGR 173 (252)
T ss_pred EEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeecCccccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877889999999
Q ss_pred ccccCCeEecc-cCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 161 VFHADPVVLHY-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 161 ~~~e~p~~~~~-~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
.+||.|.+..+ .++++.+|+|||||+|||++|.+......++++|++.++++.+|+++||||+||++|+|+||.+
T Consensus 174 ~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~G~e~Lt~~ 249 (252)
T PRK05716 174 KFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTEDGPEILTLR 249 (252)
T ss_pred ccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCCccEEeeCC
Confidence 99999987543 3467899999999999999999988888899999999999999999999999999999999964
No 6
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.7e-55 Score=365.30 Aligned_cols=235 Identities=41% Similarity=0.731 Sum_probs=214.9
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCC--CCCCCeeeecCCCccccCCCCCcCCCCCCe
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY--GGFPKSVCTSVNECICHGIPDSRALEDGDT 78 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~--~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~ 78 (235)
||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.+....+ .+|++++++|.|+..+|+.|++++|++||+
T Consensus 52 ~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~p~~~~l~~GD~ 131 (291)
T PRK12318 52 IRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGIPNDIPLKNGDI 131 (291)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCCCCCCccCCCCE
Confidence 699999999999999999999999999999998888888886554333 358888999999999999999999999999
Q ss_pred EEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecc
Q 026636 79 INIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGI 158 (235)
Q Consensus 79 v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgi 158 (235)
|++|+++.++||++|++|||++|+|+++++++|+.+.++++++++.+|||++++||++++++++++.|+....+++||||
T Consensus 132 V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~GHgI 211 (291)
T PRK12318 132 MNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVVDQFVGHGV 211 (291)
T ss_pred EEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCCcccCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987678899999
Q ss_pred ccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeee-cCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 159 GRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVM-WDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 159 G~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~-~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
|+.+||.|.+....++++.+|++||||+|||++|.+...... ..++|++.+.+|..++++||||+||++|+|+||++
T Consensus 212 Gl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VTe~G~e~LT~~ 289 (291)
T PRK12318 212 GIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILITETGYEILTLL 289 (291)
T ss_pred CccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEcCCcceeCCCC
Confidence 999999999876544567899999999999999987543332 34899999999999999999999999999999974
No 7
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=3.5e-55 Score=359.34 Aligned_cols=234 Identities=46% Similarity=0.818 Sum_probs=219.6
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+.+....+.+|++.+++|.|...+|+.|++++|++||+|+
T Consensus 19 ~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~p~~~~l~~Gd~v~ 98 (255)
T PRK12896 19 MRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGIPGPRVIKDGDLVN 98 (255)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecCCCCccCCCCCEEE
Confidence 69999999999999999999999999999999999999999876666677888889999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
+|+++.++||++|++||+++|+++++++++|+.+.++++++++.+|||++++||++++++++++.|+....+++||++|+
T Consensus 99 iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG~ 178 (255)
T PRK12896 99 IDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSVVRDLTGHGVGR 178 (255)
T ss_pred EEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEeccCcccCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998778899999999
Q ss_pred ccccCCeEec-c-cCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 161 VFHADPVVLH-Y-RNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 161 ~~~e~p~~~~-~-~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
.+||.|.+.. + .++++.+|++||||+|||+++.+..+...++++|++.++++.+++++||||+||++|+|+||+
T Consensus 179 ~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~~G~e~Lt~ 254 (255)
T PRK12896 179 SLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTRDGPEILTD 254 (255)
T ss_pred ccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcCCcceecCC
Confidence 9999996432 2 235678999999999999999998888889999999999999999999999999999999996
No 8
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.1e-54 Score=353.03 Aligned_cols=234 Identities=53% Similarity=0.932 Sum_probs=218.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+.+.+.++|+++.+..+.+|+..+++|.|+..+|+.|++++|++||+|+
T Consensus 4 lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd~v~ 83 (238)
T cd01086 4 MREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGDIVN 83 (238)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCCEEE
Confidence 69999999999999999999999999999999999999999876555567777888899999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
+|+++.++||++|++||+++|+|+++++++|+.+.++++++++++|||++++||++++++++++.|+....+++||++|+
T Consensus 84 id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHgiG~ 163 (238)
T cd01086 84 IDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHGIGR 163 (238)
T ss_pred EEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998777889999999
Q ss_pred ccccCCeEec-ccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 161 VFHADPVVLH-YRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 161 ~~~e~p~~~~-~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
.+||.|.+.. ..++++.+|++||||++||++|.+..++..++.+|.+..++|.+|+++||||+||++|+|+||+
T Consensus 164 ~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 164 KFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred ccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 9999998762 2345789999999999999999988888888899998888899999999999999999999985
No 9
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-52 Score=335.96 Aligned_cols=234 Identities=46% Similarity=0.808 Sum_probs=222.1
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCC-CcCCCCCCeE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD-SRALEDGDTI 79 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~-~~~l~~Gd~v 79 (235)
||+|++|+.++++.+.+.++||+|..||+..+++.+.++|+.|+..++.+|+-.+|.|.|...+|+.|+ +++|++||+|
T Consensus 14 ~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d~~vlk~GDiv 93 (255)
T COG0024 14 MREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGDKKVLKEGDIV 93 (255)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCCCcccCCCCEE
Confidence 799999999999999999999999999999999999999999999999999889999999999999997 6889999999
Q ss_pred EEEEeeeeCCEEeeeEEEEEecCCC-HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecc
Q 026636 80 NIDVTVYLNGYHGDTSATFFCGDVD-DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGI 158 (235)
Q Consensus 80 ~id~~~~~~Gy~~d~~Rt~~~G~~~-~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgi 158 (235)
.||+|+.++||++|.++|+.+|+.+ +..+++.+++++++.++++.+|||++++||.++++++++++||...++++|||+
T Consensus 94 ~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vVr~~~GHgi 173 (255)
T COG0024 94 KIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVVRNLTGHGI 173 (255)
T ss_pred EEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEeecccCCcc
Confidence 9999999999999999999999755 577789999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCeEecccC-CCCCcccCCcEEEEeeEEEcCCCCeeecC-CCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 159 GRVFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWD-DNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 159 G~~~~e~p~~~~~~~-~~~~~l~~gmv~~iep~~~~~~~~~~~~~-~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
|..+||.|.+.++.. +...+|+|||||+|||++..+......++ ++|+++++|+...+|+|+||+||++|+|+||.
T Consensus 174 g~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt~~g~eilT~ 251 (255)
T COG0024 174 GRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVTEDGCEILTL 251 (255)
T ss_pred CcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEeCCCcEEeeC
Confidence 999999999998743 34479999999999999999988888777 99999999999999999999999999999995
No 10
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-53 Score=337.62 Aligned_cols=235 Identities=63% Similarity=1.098 Sum_probs=228.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|++++.++++.+...++||+|..||.++++.+..++|++|+.++|.+||-.+|.+.|+.++|+.|+.|+|++||+|.
T Consensus 125 mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvN 204 (369)
T KOG2738|consen 125 MRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVN 204 (369)
T ss_pred HHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEe
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
||+...++||+.|+++||++|+++++.+++.+..+++++.+++.+|||+++.|+.+.+++...++||...+.++|||||.
T Consensus 205 iDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~ 284 (369)
T KOG2738|consen 205 IDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGR 284 (369)
T ss_pred EEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred ccccCCeEecccC-CCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 161 VFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 161 ~~~e~p~~~~~~~-~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
-+|-.|.+.++.. ....++.+||+|+|||++..+..+-..|||+|+.++.||..++|||+|+|||++|+|+||.+
T Consensus 285 ~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~r 360 (369)
T KOG2738|consen 285 VFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWEDITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTKR 360 (369)
T ss_pred ccccCCCchhhcccCCcceeecCceEEeeeeecccccccccCCCCceEEecCCceecceeeEEEEecccceehhcc
Confidence 9999999999865 36689999999999999999988888999999999999999999999999999999999963
No 11
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=1.5e-52 Score=337.31 Aligned_cols=221 Identities=17% Similarity=0.193 Sum_probs=194.1
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccC-CCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS-PLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTI 79 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~-~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v 79 (235)
||+|+++++++++++.+.++||+||.||++.+.+.+.+.|+... ...+.++.+++++|.|+..+|+.|++++|++||+|
T Consensus 4 ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~GD~v 83 (228)
T cd01090 4 IRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRGDIL 83 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCCCEE
Confidence 69999999999999999999999999999999999999987531 11112233578899999999999999999999999
Q ss_pred EEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEe-eccceecc
Q 026636 80 NIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV-RQFVGHGI 158 (235)
Q Consensus 80 ~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~-~~~~GHgi 158 (235)
++|+++.++||++|++|||++|+|+++++++|+++.++++++++.+|||++++||+++++++++++|+..+ .+.+||++
T Consensus 84 ~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~GHgi 163 (228)
T cd01090 84 SLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYGHSF 163 (228)
T ss_pred EEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999864 56699999
Q ss_pred ccccccCCeEe--cccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 159 GRVFHADPVVL--HYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 159 G~~~~e~p~~~--~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
|+.+||.|.-. ....+++.+|+|||||++||++|.+.. .+|.+|+|+||||+||++|+|+||.
T Consensus 164 Gl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~-------------~~g~gG~ried~v~Vt~~G~e~Lt~ 228 (228)
T cd01090 164 GVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEG-------------QPGAGGYREHDILVINENGAENITG 228 (228)
T ss_pred ccccccCCCccccccCCCCCCccCCCCEEEECCEEeeccc-------------CCCCcEEEeeeEEEECCCccccCcC
Confidence 99999976311 112356789999999999999997421 0256899999999999999999984
No 12
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=6e-52 Score=355.55 Aligned_cols=210 Identities=22% Similarity=0.382 Sum_probs=195.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|++|++++++.+.+.++||+||.||++.+++.+.++|++. .+|++++++|.|+..+|+.|++++|++||+|+
T Consensus 136 ~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~~~ph~~~~~~~l~~gd~v~ 210 (361)
T PRK09795 136 IRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEK-----ASFDTIVASGWRGALPHGKASDKIVAAGEFVT 210 (361)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCc-----CCCCeEEEEeccccccCCCCCCceecCCCEEE
Confidence 6899999999999999999999999999999999999999976 35889999999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecC--CCHH---HHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceE-eeccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFV 154 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~--~~~~---~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~ 154 (235)
+|+|+.|+||++|++||+++|. ++++ ++++|+.++++++++++.+|||++++||++++++++++.||.. +.|.+
T Consensus 211 ~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~ 290 (361)
T PRK09795 211 LDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNT 290 (361)
T ss_pred EEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCC
Confidence 9999999999999999999964 3333 7899999999999999999999999999999999999999986 47889
Q ss_pred eeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 155 GHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 155 GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
|||||+++||.|.+.+ +++.+|+|||||+|||++|.+ +.+|+|+||||+||++|+|+||+
T Consensus 291 GHgiGl~~he~p~i~~---~~~~~l~~gmv~~iEpgiy~~-----------------~~~gvriEd~v~vt~~G~e~Lt~ 350 (361)
T PRK09795 291 GHAIGIEVHEDPRFSP---RDTTTLQPGMLLTVEPGIYLP-----------------GQGGVRIEDVVLVTPQGAEVLYA 350 (361)
T ss_pred CccCCccccCCCCcCC---CCCCCcCCCCEEEECCEEEeC-----------------CCCEEEEeeEEEECCCCcEeCcC
Confidence 9999999999998865 578999999999999999975 56799999999999999999997
Q ss_pred C
Q 026636 235 C 235 (235)
Q Consensus 235 ~ 235 (235)
+
T Consensus 351 ~ 351 (361)
T PRK09795 351 M 351 (361)
T ss_pred C
Confidence 4
No 13
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=1e-51 Score=336.52 Aligned_cols=220 Identities=24% Similarity=0.308 Sum_probs=194.6
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+++.+.+.|+++ +|++++++|.|+..+|+.|++++|++||+|+
T Consensus 4 lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd~v~ 77 (243)
T cd01087 4 MRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGDLVL 77 (243)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCCEEE
Confidence 6999999999999999999999999999999999999999872 3778899999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEe-cCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCc------------
Q 026636 81 IDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY------------ 147 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~------------ 147 (235)
+|+++.|+||++|++||+++ |+|+++++++|+++.++++++++.+|||++++||++++++++++.++
T Consensus 78 vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~ 157 (243)
T cd01087 78 IDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEI 157 (243)
T ss_pred EEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhh
Confidence 99999999999999999999 69999999999999999999999999999999999999999976532
Q ss_pred -------eEeeccceeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEE
Q 026636 148 -------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEH 220 (235)
Q Consensus 148 -------~~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed 220 (235)
..+.|.+||++|+.+||.|.+.. .++++.+|++||||+|||++|.++..... ++.| +.+|+++||
T Consensus 158 ~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~-~~~~------~~~g~~ied 229 (243)
T cd01087 158 VESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDV-PEYF------RGGGIRIED 229 (243)
T ss_pred hhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECCEEEeCCccccc-cccc------ceeEEEeee
Confidence 22467799999999999997721 12577899999999999999986432211 1122 468999999
Q ss_pred EEEEcCCceEecCC
Q 026636 221 TILITRDGAEILTQ 234 (235)
Q Consensus 221 ~v~vt~~g~e~Lt~ 234 (235)
||+||++|+|+||+
T Consensus 230 ~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 230 DVLVTEDGPENLTR 243 (243)
T ss_pred EEEEcCCcceeCcC
Confidence 99999999999995
No 14
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-51 Score=352.62 Aligned_cols=209 Identities=29% Similarity=0.462 Sum_probs=198.0
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|++++++++.++.+.+++|+||.||.+.++..+.+.|++. .+|++++++|.|++.+|+.|+++++++||+|+
T Consensus 163 ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~-----~sf~~iv~~G~n~a~pH~~~~~~~~~~gd~vl 237 (384)
T COG0006 163 IRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEG-----PSFDTIVASGENAALPHYTPSDRKLRDGDLVL 237 (384)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----cCcCcEEeccccccCcCCCCCcccccCCCEEE
Confidence 6999999999999999999999999999999999999999765 35899999999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceE-eeccceeccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHGIG 159 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~GHgiG 159 (235)
||+|+.|+||++|+||||++|+|+++++++|+.++++++++++++|||++++||+.++++++.+.|+.. +.|.+|||+|
T Consensus 238 iD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h~~GHgvG 317 (384)
T COG0006 238 IDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLHGTGHGVG 317 (384)
T ss_pred EEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccCCccccCC
Confidence 999999999999999999999999999999999999999999999999999999999999999998876 4777999999
Q ss_pred --cccccCCe-EecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 160 --RVFHADPV-VLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 160 --~~~~e~p~-~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
+++||.|. +.+ ++..+|+|||||++||++|.+ +.+|+|+||+++||++|+|+||.
T Consensus 318 ~~l~vhE~p~~~~~---~~~~~L~~GMv~t~Epg~y~~-----------------g~~GirIEd~vlVte~G~e~LT~ 375 (384)
T COG0006 318 FVLDVHEHPQYLSP---GSDTTLEPGMVFSIEPGIYIP-----------------GGGGVRIEDTVLVTEDGFEVLTR 375 (384)
T ss_pred CCcccCcCccccCC---CCCccccCCcEEEeccccccC-----------------CCceEEEEEEEEEcCCCceeccc
Confidence 99999994 554 588999999999999999874 78899999999999999999994
No 15
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.4e-48 Score=329.03 Aligned_cols=209 Identities=21% Similarity=0.297 Sum_probs=188.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+.+.+.+.|.... . +.+++++|.+ ..+|+.|+++++++||+|+
T Consensus 104 mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~~----~-~~~~i~~G~~-~~~h~~~~~~~l~~Gd~V~ 177 (323)
T PRK15173 104 LRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----S-RFHLISVGAD-FSPKLIPSNTKACSGDLIK 177 (323)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCCC----C-CCcEEEECCC-CccCCCCCCCccCCCCEEE
Confidence 69999999999999999999999999999999888888765431 1 2246667776 4689999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceE-eeccceeccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHGIG 159 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~GHgiG 159 (235)
+|+++.|+||++|++|||++|+|+++++++|+.+.++++++++.+|||++++||++++++++++.|+.. +.+++|||+|
T Consensus 178 iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG 257 (323)
T PRK15173 178 FDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNG 257 (323)
T ss_pred EEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 4678999999
Q ss_pred c--ccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 160 R--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 160 ~--~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
+ .+||.|.+.. +++.+|++||||+|||++|.+ +.+|+++||||+||++|+|+||++
T Consensus 258 ~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~-----------------g~ggvriEDtvlVTe~G~e~LT~~ 315 (323)
T PRK15173 258 VFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIEDMILINKEGIEFLSKL 315 (323)
T ss_pred CCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcC-----------------CCcEEEEeeEEEEcCCcceeCCCC
Confidence 6 7899999875 467899999999999999963 467899999999999999999974
No 16
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.9e-48 Score=310.07 Aligned_cols=204 Identities=28% Similarity=0.494 Sum_probs=191.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+++.+.++|++. .+|++++++|.|+..+|+.|+++++++||+|+
T Consensus 4 ~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd~v~ 78 (208)
T cd01092 4 LRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGDLVL 78 (208)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCCEEE
Confidence 6999999999999999999999999999999999999999874 35889999999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceE-eeccceeccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHGIG 159 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~GHgiG 159 (235)
+|+++.++||++|++||+++|+|+++++++++.+.++++.+++.+|||++++||++++++++++.|+.. +.+.+||++|
T Consensus 79 id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh~iG 158 (208)
T cd01092 79 IDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGHGVG 158 (208)
T ss_pred EEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCccccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 4677999999
Q ss_pred cccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCce
Q 026636 160 RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 229 (235)
Q Consensus 160 ~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~ 229 (235)
+..||.|.+.+ +++.+|++||||+|||+++.+ +.+++++||||+||++|+
T Consensus 159 ~~~~e~p~i~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 159 LEVHEAPYISP---GSDDVLEEGMVFTIEPGIYIP-----------------GKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred cccCcCCCcCC---CCCCCcCCCCEEEECCeEEec-----------------CCCEEEeeeEEEECCCCC
Confidence 99999998764 578999999999999999864 567999999999999985
No 17
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=1.3e-48 Score=341.09 Aligned_cols=218 Identities=22% Similarity=0.313 Sum_probs=192.8
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|++++++++.++++.++||+||.||.+.+.+.+.++|+.. .+|++++++|.|++.+|+.|++++|++||+|+
T Consensus 182 ~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~~H~~~~~~~l~~GDlVl 256 (438)
T PRK10879 182 LRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILHYTENESEMRDGDLVL 256 (438)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCccccccCCCCccccCCCCEEE
Confidence 6999999999999999999999999999999999999999864 34788999999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEe-cCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhh----------------
Q 026636 81 IDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD---------------- 143 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~---------------- 143 (235)
+|+|+.++||++|++|||++ |+++++++++|++++++++++++.+|||++++||++++.+++.
T Consensus 257 iD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~ 336 (438)
T PRK10879 257 IDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQL 336 (438)
T ss_pred EEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHH
Confidence 99999999999999999999 8999999999999999999999999999999999999886543
Q ss_pred --cCCceE-eeccceeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEE
Q 026636 144 --RYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEH 220 (235)
Q Consensus 144 --~~G~~~-~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed 220 (235)
+.++.. +.|.+||++|+++||.|.+.. +++.+|+|||||+|||++|.++. |.+..+..++|+|+||
T Consensus 337 ~~~~~~~~~~~Hg~GH~iGldvHd~~~~~~---~~~~~L~~GmV~tvEPgiY~~~~--------~~~~~~~~~~GiRiED 405 (438)
T PRK10879 337 IAENAHRPFFMHGLSHWLGLDVHDVGVYGQ---DRSRILEPGMVLTVEPGLYIAPD--------ADVPEQYRGIGIRIED 405 (438)
T ss_pred HHhccCccccCCCCccccCcCcCcCCCcCC---CCCCcCCCCCEEEECCEEEECCC--------cCcccccCccEEEecc
Confidence 344443 478899999999999887642 46789999999999999998642 1111122456999999
Q ss_pred EEEEcCCceEecCC
Q 026636 221 TILITRDGAEILTQ 234 (235)
Q Consensus 221 ~v~vt~~g~e~Lt~ 234 (235)
+|+||++|+|+||.
T Consensus 406 ~VlVT~~G~e~LT~ 419 (438)
T PRK10879 406 DIVITETGNENLTA 419 (438)
T ss_pred EEEECCCcCeEcCc
Confidence 99999999999995
No 18
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=2.3e-48 Score=336.11 Aligned_cols=212 Identities=17% Similarity=0.217 Sum_probs=185.4
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|++|++++++++.+.++||+||.||++.+.+...+. .......+.+|.+++++|.|+..+|+.|+++++++||+|+
T Consensus 167 lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~-~~~~g~~~~~~~~iv~sG~~~a~pH~~~~~~~l~~gd~v~ 245 (391)
T TIGR02993 167 MRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRG-VDGFGGDYPAIVPLLPSGADASAPHLTWDDSPMKVGEGTF 245 (391)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhc-ccCcCCCcCCcccccccCccccCCCCCCCCCcccCCCEEE
Confidence 699999999999999999999999999999886553321 1100011234667888999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
+|+++.|+||++|++||+++|+|+++++++|+.+.++++++++++|||++++||+++++++++++|+.. .|.+|||+|+
T Consensus 246 iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~-~h~~GhgiGl 324 (391)
T TIGR02993 246 FEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHK-DSRTGYPIGL 324 (391)
T ss_pred EEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcc-CCCceeeecc
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 5789999999
Q ss_pred ccccC-----CeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 161 VFHAD-----PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 161 ~~~e~-----p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
.+|+. |.+.. +++.+|++||||+|||++|.+ + .|+++||||+||++|+|+||++
T Consensus 325 ~~~~~~~e~~~~l~~---~~~~~L~~GMv~tvEpgiy~~-----------------~-~Gvried~v~VT~~G~e~Lt~~ 383 (391)
T TIGR02993 325 SYPPDWGERTMSLRP---GDNTVLKPGMTFHFMTGLWME-----------------D-WGLEITESILITETGVECLSSV 383 (391)
T ss_pred CcCCCCCCccccccC---CCCceecCCCEEEEcceeEeC-----------------C-CCeEEeeEEEECCCcceecccC
Confidence 87642 34443 578999999999999999974 2 4899999999999999999974
No 19
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=6.7e-48 Score=334.29 Aligned_cols=209 Identities=21% Similarity=0.297 Sum_probs=190.2
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||++.+.+.+.+.|.... . +.+++.+|.+ ..+|+.|+++++++||+|+
T Consensus 187 ~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~-~~~~v~~G~~-~~~h~~~~~~~l~~Gd~v~ 260 (406)
T PRK14575 187 LRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----S-RFHLISVGAD-FSPKLIPSNTKACSGDLIK 260 (406)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----C-cCceEEECCC-cccCCCCCCCcCCCCCEEE
Confidence 69999999999999999999999999999999998888876431 1 2246777877 5689999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceE-eeccceeccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHGIG 159 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~GHgiG 159 (235)
+|+|+.|+||++|++|||++|+|+++++++|+.++++++++++.+|||++++||++++++++++.||.. +.+++|||+|
T Consensus 261 iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG 340 (406)
T PRK14575 261 FDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNG 340 (406)
T ss_pred EEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 4678999999
Q ss_pred c--ccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 160 R--VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 160 ~--~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
+ .+||.|++.. +++.+|++||||++||++|.+ +.+|+++||||+||++|+|+||++
T Consensus 341 ~~lg~~e~P~i~~---~~~~~Le~GMv~tiEpgiy~~-----------------g~gGvriEDtvlVT~~G~e~LT~~ 398 (406)
T PRK14575 341 VFLGLEESPFVST---HATESFTSGMVLSLETPYYGY-----------------NLGSIMIEDMILINKEGIEFLSKL 398 (406)
T ss_pred CCCCCccCCCCCC---CCCCCcCCCCEEEECCeeecC-----------------CCcEEEEEeEEEEcCCCcccCCCC
Confidence 5 8899999875 477899999999999999974 567999999999999999999964
No 20
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=1.1e-47 Score=332.94 Aligned_cols=209 Identities=21% Similarity=0.253 Sum_probs=190.9
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|++++++++.++.+.++||+||.||++.++..+.+.|.... . +.+++++|.+ ..+|+.|+++++++||+|+
T Consensus 186 ~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~-~~~~v~~G~~-~~~h~~~~~~~l~~Gd~v~ 259 (405)
T PRK14576 186 LRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETNF----S-RFNLISVGDN-FSPKIIADTTPAKVGDLIK 259 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----C-CCCEEEECCc-ccCCCCCCCcccCCCCEEE
Confidence 68999999999999999999999999999999999998875421 1 2257888888 5689999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceE-eeccceeccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGHGIG 159 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~GHgiG 159 (235)
+|+++.++||++|++|||++|+|+++++++|+.+.++++++++++|||++++||++++++++++.||.. +.+++|||+|
T Consensus 260 ~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG 339 (405)
T PRK14576 260 FDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDG 339 (405)
T ss_pred EEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999975 3578999999
Q ss_pred --cccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 160 --RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 160 --~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
+.+||.|.+.+ +++.+|++||||+|||++|.+ |.+|+++||||+||++|+|+||++
T Consensus 340 ~~l~~~e~P~i~~---~~~~~Le~GMv~~vEp~~y~~-----------------g~ggvriEDtvlVTe~G~e~LT~~ 397 (405)
T PRK14576 340 VFLGLEEVPFVST---QATETFCPGMVLSLETPYYGI-----------------GVGSIMLEDMILITDSGFEFLSKL 397 (405)
T ss_pred CCCCcCcCCCcCC---CCCCccCCCCEEEECCceeec-----------------CCCEEEEeeEEEECCCccccCCCC
Confidence 78899998764 478899999999999999874 578999999999999999999974
No 21
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=4.4e-47 Score=304.37 Aligned_cols=206 Identities=15% Similarity=0.142 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHhhhCCCC--CCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCC---CcCCCCCCe
Q 026636 4 SGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALEDGDT 78 (235)
Q Consensus 4 A~~i~~~~~~~~~~~~~~G--~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~l~~Gd~ 78 (235)
++++..++++.+.+.++|| +||.||++.+++.+.+.|.... .+|++++++|+|+..+|+.|+ +++|++||+
T Consensus 9 ~~~~~~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l~~GD~ 84 (224)
T cd01085 9 DGVALVEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKISPDGL 84 (224)
T ss_pred HHHHHHHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCcccCCCCE
Confidence 3444468888899999999 9999999999987777664322 358899999999999999998 999999999
Q ss_pred EEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhc-cCCCchhhHHHHHHHhhhcCCceEeeccceec
Q 026636 79 INIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVC-APGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 157 (235)
Q Consensus 79 v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~-kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHg 157 (235)
|++|+++.++||++|++|||++|+++++++++|+.+++++.++++.+ +||+++.+|++++++.+.+.|+. +.|.+|||
T Consensus 85 V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h~~GHg 163 (224)
T cd01085 85 YLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGHGTGHG 163 (224)
T ss_pred EEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCCCCCCC
Confidence 99999999999999999999999999999999999999999999888 59999999999999999999986 56789999
Q ss_pred cc--cccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceEec
Q 026636 158 IG--RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAEIL 232 (235)
Q Consensus 158 iG--~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e~L 232 (235)
|| +.+||.|.+. +.++++.+|++||||+|||++|.+ +.+|+++||+|+||++|+.-+
T Consensus 164 IG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~-----------------g~~gvried~v~Vt~~G~~~~ 222 (224)
T cd01085 164 VGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKE-----------------GKYGIRIENLVLVVEAETTEF 222 (224)
T ss_pred CCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeC-----------------CCeEEEeeEEEEEeeCCcCCC
Confidence 99 5889999873 122567899999999999999974 578999999999999998643
No 22
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=8.4e-47 Score=300.55 Aligned_cols=202 Identities=30% Similarity=0.472 Sum_probs=182.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHH-HHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTI 79 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~-~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v 79 (235)
||+|+++++++++++.+.++||+||.||++.+.+. +.+.|... .+|++++++|.|...+|+.|++++|++||+|
T Consensus 3 ~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd~v 77 (207)
T PF00557_consen 3 MRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGDIV 77 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCCcc
Confidence 69999999999999999999999999999999998 66777543 3478899999999999999999999999999
Q ss_pred EEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCc-eEeeccceecc
Q 026636 80 NIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGHGI 158 (235)
Q Consensus 80 ~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~-~~~~~~~GHgi 158 (235)
++|++++|+||++|++||+++| |+++++++|+.++++++.+++.+|||++++||++++++.+++.|| ..+.+.+||+|
T Consensus 78 ~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH~i 156 (207)
T PF00557_consen 78 IIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGHGI 156 (207)
T ss_dssp EEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEEEE
T ss_pred eeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccccc
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999 55688899999
Q ss_pred ccccccC-CeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 159 GRVFHAD-PVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 159 G~~~~e~-p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
|+.+||. |++.. .+++.+|++||||+|||.++.. ++.+++++||+++||+
T Consensus 157 G~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~----------------~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 157 GLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFI----------------PGWGGVRFEDTVLVTE 207 (207)
T ss_dssp SSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEE----------------TTSEEEEEBEEEEEES
T ss_pred cccccccceeeec--ccccceecCCCceeEeeeEEcc----------------CCCcEEEEEEEEEECc
Confidence 9999997 99862 2588999999999999999842 2456999999999996
No 23
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=7.4e-46 Score=300.37 Aligned_cols=224 Identities=15% Similarity=0.191 Sum_probs=190.0
Q ss_pred ChHHHHHHHHHHHHHhh-----hCCCC--CCHHHHHHHHHHHHHHCCCccCCC----CCCCCCCeeeecCCC-ccccCCC
Q 026636 1 MRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVNE-CICHGIP 68 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~-----~~~~G--~te~el~~~~~~~~~~~g~~~~~~----~~~~~~~~v~~g~~~-~~~h~~~ 68 (235)
||+|++++.++|+.... .|.+| +|+.+|+..++..+.+.+.....+ .-.+|++++++|.|. ..+|+.+
T Consensus 4 ~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~~~y~~iv~sG~~~~~l~h~~~ 83 (243)
T cd01091 4 IKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLDWCYPPIIQSGGNYDLLKSSSS 83 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcCcccCCeEeECcCcccCCCCCC
Confidence 68999999999976666 89999 999999999999999887541101 125799999999999 7899999
Q ss_pred CCcCCCCCCeEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCce
Q 026636 69 DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG 148 (235)
Q Consensus 69 ~~~~l~~Gd~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~ 148 (235)
+++.++.|++|++|+|++|+||++|++|||++| |+++++++|+.++++++++++.+|||++++||++++++++++.|..
T Consensus 84 s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~ 162 (243)
T cd01091 84 SDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPE 162 (243)
T ss_pred CccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChh
Confidence 999999999999999999999999999999997 7999999999999999999999999999999999999999998743
Q ss_pred E---eeccceeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEc
Q 026636 149 V---VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 225 (235)
Q Consensus 149 ~---~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt 225 (235)
. +.+.+||+||+++||.|.+.. ++++.+|++||||+|||++|...+. +..-.+++.+|+++||||+||
T Consensus 163 ~~~~~~~~~GHgiGle~hE~~~~l~--~~~~~~L~~GMvf~vepGi~~~~~~-------~~~~~~~~~~gv~ieDtV~Vt 233 (243)
T cd01091 163 LEPNFTKNLGFGIGLEFRESSLIIN--AKNDRKLKKGMVFNLSIGFSNLQNP-------EPKDKESKTYALLLSDTILVT 233 (243)
T ss_pred HHHhCcCCcccccCcccccCccccC--CCCCCCcCCCCEEEEeCCcccccCc-------cccCccCCeeEEEEEEEEEEc
Confidence 2 356699999999999886432 2467899999999999999842110 000012357899999999999
Q ss_pred CCce-EecCC
Q 026636 226 RDGA-EILTQ 234 (235)
Q Consensus 226 ~~g~-e~Lt~ 234 (235)
++|+ |+||+
T Consensus 234 ~~G~~~~LT~ 243 (243)
T cd01091 234 EDEPAIVLTN 243 (243)
T ss_pred CCCCceecCC
Confidence 9999 99985
No 24
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=6.3e-45 Score=317.39 Aligned_cols=227 Identities=17% Similarity=0.202 Sum_probs=182.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCc-CCCCCCeE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSR-ALEDGDTI 79 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~-~l~~Gd~v 79 (235)
||+|+++++++++++++.++||+||.||.+.+.... ..+... .+|++++++|.|+..+|+.++++ .+++||+|
T Consensus 170 mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~~H~~~~~~~~~~~Gd~v 243 (443)
T PRK13607 170 MREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAVLHYTKLDHQAPAEMRSF 243 (443)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceEecCCccCCCCCCCCCEE
Confidence 799999999999999999999999999998765432 223221 35889999999999999998874 68999999
Q ss_pred EEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhh----hcCCce-------
Q 026636 80 NIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA----DRYNYG------- 148 (235)
Q Consensus 80 ~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~----~~~G~~------- 148 (235)
++|+|+.++||++|++|||+ |+++++++++|+.+.++++++++.+|||++++||+.++++++ .+.|+.
T Consensus 244 liD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~ 322 (443)
T PRK13607 244 LIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEA 322 (443)
T ss_pred EEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHH
Confidence 99999999999999999999 889999999999999999999999999999999999988765 334433
Q ss_pred ---------EeeccceeccccccccCCeEecc-------------cCCCCCcccCCcEEEEeeEEEcCCCCeeecC----
Q 026636 149 ---------VVRQFVGHGIGRVFHADPVVLHY-------------RNNDHGRMVLNQTFTIEPMLTIGSINPVMWD---- 202 (235)
Q Consensus 149 ---------~~~~~~GHgiG~~~~e~p~~~~~-------------~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~---- 202 (235)
.+.|.+||++|+++||.+.+... .-....+|+|||||+|||++|+++..+..+.
T Consensus 323 ~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~~ll~~~~~~~~ 402 (443)
T PRK13607 323 MVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFIDSLLAPLREGPF 402 (443)
T ss_pred HHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCeeeeChhhhchhhhhhh
Confidence 25788999999999997533110 0024579999999999999999642111000
Q ss_pred ---CCceEEec-CCCeeEEEEEEEEEcCCceEecCC
Q 026636 203 ---DNWTIVTE-DGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 203 ---~~~~~~~~-~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
-+|..+.+ .+.+|+|+||+|+||++|+|+||+
T Consensus 403 ~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~ 438 (443)
T PRK13607 403 SKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTR 438 (443)
T ss_pred hhhccHHHHHhhcCCCEEeecceEEEcCCCCeECCh
Confidence 01211111 246799999999999999999995
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=1.9e-44 Score=285.91 Aligned_cols=203 Identities=28% Similarity=0.517 Sum_probs=189.3
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+++++++++++.+.++||+||.||.+.+.+.+.++|+.+ ++++++++|.|...+|+.|+++++++||+|+
T Consensus 4 ~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd~v~ 77 (207)
T cd01066 4 LRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGDLVL 77 (207)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCCEEE
Confidence 6899999999999999999999999999999999999999932 3678899999888999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCce-Eeeccceeccc
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG-VVRQFVGHGIG 159 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~-~~~~~~GHgiG 159 (235)
+|+++.++||++|++||+++|+++++++++++.+.++++.+++.+|||+++.||++++++++++.|+. ...+.+||++|
T Consensus 78 ~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh~iG 157 (207)
T cd01066 78 VDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGHGIG 157 (207)
T ss_pred EEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999984 45788999999
Q ss_pred cccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCce
Q 026636 160 RVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGA 229 (235)
Q Consensus 160 ~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~ 229 (235)
+..||.|.+.. +.+.+|++||||+|||.++.+ +..++++||+++||++|+
T Consensus 158 ~~~~e~~~~~~---~~~~~l~~gmv~~iep~~~~~-----------------~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 158 LEIHEPPVLKA---GDDTVLEPGMVFAVEPGLYLP-----------------GGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred cccCCCCCcCC---CCCCCcCCCCEEEECCEEEEC-----------------CCcEEEeeeEEEEeCCCC
Confidence 99999998543 577899999999999999974 357999999999999985
No 26
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=6.1e-44 Score=296.74 Aligned_cols=223 Identities=30% Similarity=0.555 Sum_probs=197.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCC---CcCCCCCC
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALEDGD 77 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~l~~Gd 77 (235)
||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.+ +||++++ .|+..+|+.|+ +++|++||
T Consensus 5 ~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~------afp~~vs--~n~~~~H~~p~~~d~~~l~~GD 76 (291)
T PRK08671 5 YLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKP------AFPCNIS--INEVAAHYTPSPGDERVFPEGD 76 (291)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCcc------CCCCEEe--eCCCccCCCCCCCCCcccCCCC
Confidence 6899999999999999999999999999999999999999865 4787764 56667899875 68999999
Q ss_pred eEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceec
Q 026636 78 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 157 (235)
Q Consensus 78 ~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHg 157 (235)
+|++|+|++++||++|++||+++| ++++++++++.++++++++.+|||++++||+++++++++++||.++.+++||+
T Consensus 77 vV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~~GHg 153 (291)
T PRK08671 77 VVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNLTGHG 153 (291)
T ss_pred EEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCCcccC
Confidence 999999999999999999999998 47899999999999999999999999999999999999999999888999999
Q ss_pred ccc-ccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecC----------------------------------
Q 026636 158 IGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWD---------------------------------- 202 (235)
Q Consensus 158 iG~-~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~---------------------------------- 202 (235)
||+ .+|+.|.+.....+++.+|+|||||+|||+++.+.+++...+
T Consensus 154 iG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~~~~pF 233 (291)
T PRK08671 154 LERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEYNTLPF 233 (291)
T ss_pred cCCCcccCCCccCccCCCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHCCCCCc
Confidence 997 889999886655567899999999999999998877753211
Q ss_pred -------------------------CCceEEe-cCCCeeEEEEEEEEEcCCceEecCC
Q 026636 203 -------------------------DNWTIVT-EDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 203 -------------------------~~~~~~~-~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
..++++. ++|....|+|+||+||++|++++|.
T Consensus 234 ~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 234 AERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred chHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 1223444 6788999999999999999999985
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=5.8e-44 Score=287.93 Aligned_cols=211 Identities=24% Similarity=0.396 Sum_probs=179.4
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCC--cc---CCCCCCCCCCeeeecCCCccccCCC----CCc
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YP---SPLGYGGFPKSVCTSVNECICHGIP----DSR 71 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~--~~---~~~~~~~~~~~v~~g~~~~~~h~~~----~~~ 71 (235)
||+|++|++++++++.+.++||+||.||+..++..+.+... .+ ....+.+|+++++ .|+..+|+.| +++
T Consensus 4 ~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~--~n~~~~H~~p~~~~~~~ 81 (228)
T cd01089 4 YKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCIS--VNNCVCHFSPLKSDATY 81 (228)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEec--cCceeecCCCCCCCCCc
Confidence 69999999999999999999999999999888777777422 11 1112245776654 6888999985 789
Q ss_pred CCCCCCeEEEEEeeeeCCEEeeeEEEEEecCCCH-----HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCC
Q 026636 72 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYN 146 (235)
Q Consensus 72 ~l~~Gd~v~id~~~~~~Gy~~d~~Rt~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G 146 (235)
+|++||+|++|+|+.|+||++|++|||++|++++ +++++++.+.++++++++.+|||++++||+++++++++++|
T Consensus 82 ~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G 161 (228)
T cd01089 82 TLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYG 161 (228)
T ss_pred ccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999875 89999999999999999999999999999999999999999
Q ss_pred ceEeeccceeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 147 YGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 147 ~~~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
|..+..+++|++|..+.-.|... .-..+|++||||++||.++.+ |.+++++||||+||+
T Consensus 162 ~~~~~~~~~h~~g~~~~~~~~~~----~~~~~l~~gmvf~~ep~~~~~-----------------g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 162 CTPVEGVLSHQLKRVVSSGEGKA----KLVECVKHGLLFPYPVLYEKE-----------------GEVVAQFKLTVLLTP 220 (228)
T ss_pred CEEecCccccCcCceEecCCCCc----cchhhccCCcccccceeEccC-----------------CCeEEEEEEEEEEcC
Confidence 98888888888887333222111 125689999999999999863 788999999999999
Q ss_pred CceEecCC
Q 026636 227 DGAEILTQ 234 (235)
Q Consensus 227 ~g~e~Lt~ 234 (235)
+|+|.||.
T Consensus 221 ~G~e~lt~ 228 (228)
T cd01089 221 NGVTVLTG 228 (228)
T ss_pred CCCeeCCC
Confidence 99999984
No 28
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=4.1e-43 Score=291.81 Aligned_cols=223 Identities=31% Similarity=0.537 Sum_probs=197.0
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCC---CcCCCCCC
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALEDGD 77 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~l~~Gd 77 (235)
||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+ +||++ ++.|+..+|+.|+ +++|++||
T Consensus 4 ~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~------afp~~--is~n~~~~H~~p~~~d~~~l~~GD 75 (291)
T cd01088 4 YREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP------AFPVN--LSINECAAHYTPNAGDDTVLKEGD 75 (291)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC------CCCce--eccCCEeeCCCCCCCCCcccCCCC
Confidence 6899999999999999999999999999999999999999764 37754 5788899999986 48999999
Q ss_pred eEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceec
Q 026636 78 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 157 (235)
Q Consensus 78 ~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHg 157 (235)
+|++|+|++++||++|++||+++|+ ++++++++++++++++++.+|||++++||+++++++++++|+.+..+++||+
T Consensus 76 vV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~GHg 152 (291)
T cd01088 76 VVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLTGHS 152 (291)
T ss_pred EEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCCccC
Confidence 9999999999999999999999985 7889999999999999999999999999999999999999999888999999
Q ss_pred ccc-ccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecC----------------------------------
Q 026636 158 IGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWD---------------------------------- 202 (235)
Q Consensus 158 iG~-~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~---------------------------------- 202 (235)
||. .+|+.|.+.....+++.+|+|||||+|||++..+.+++....
T Consensus 153 ig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~~~pF 232 (291)
T cd01088 153 IERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFGTLPF 232 (291)
T ss_pred ccCccccCCCccCccCCCCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCCCCCc
Confidence 995 789987765544456789999999999999988877752110
Q ss_pred --------------------------CCceEEe-cCCCeeEEEEEEEEEcCCceEecCC
Q 026636 203 --------------------------DNWTIVT-EDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 203 --------------------------~~~~~~~-~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
..|+++. ++|...+|+|+||+|+++|++++|+
T Consensus 233 ~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 233 ARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred ChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 1223444 6799999999999999999999985
No 29
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=9.2e-43 Score=289.84 Aligned_cols=223 Identities=30% Similarity=0.482 Sum_probs=194.4
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCC---CcCCCCCC
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALEDGD 77 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~l~~Gd 77 (235)
||+|++|++++++++.+.++||+||.||++.+++.+.+.|+.+ +||+++ +.|+..+|+.|. +++|++||
T Consensus 8 ~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~~l~~GD 79 (295)
T TIGR00501 8 WIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKTVFKDGD 79 (295)
T ss_pred HHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCccCCCCC
Confidence 6899999999999999999999999999999999999999875 488775 468888999985 67899999
Q ss_pred eEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceec
Q 026636 78 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 157 (235)
Q Consensus 78 ~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHg 157 (235)
+|++|+|+.++||++|++||+++|+ .++++++++.++++++++.+|||++++||+++++++++++||.++.+++||+
T Consensus 80 vV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~~~~GHg 156 (295)
T TIGR00501 80 VVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPISNLTGHS 156 (295)
T ss_pred EEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeecCCCCcc
Confidence 9999999999999999999999985 3789999999999999999999999999999999999999999888999999
Q ss_pred ccc-ccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecC----------------------------------
Q 026636 158 IGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWD---------------------------------- 202 (235)
Q Consensus 158 iG~-~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~---------------------------------- 202 (235)
+|. .+|+.+.+....++++.+|++||||+|||++..+.+++...+
T Consensus 157 ig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~~~~~~pF 236 (295)
T TIGR00501 157 MAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDENYGTLPF 236 (295)
T ss_pred eecccccCCCccCeecCCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHHHCCCCCc
Confidence 995 788875544333356789999999999999887766652111
Q ss_pred --------------------------CCceEEe-cCCCeeEEEEEEEEEcCCceEecCC
Q 026636 203 --------------------------DNWTIVT-EDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 203 --------------------------~~~~~~~-~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
..|+++. ++|....|+|+||+|+++|++++|.
T Consensus 237 ~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 237 ARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred chhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 1223444 6788999999999999999999984
No 30
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.8e-42 Score=298.52 Aligned_cols=225 Identities=25% Similarity=0.365 Sum_probs=194.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHC----CCccCCCCCCCCCCeeeecCCCccccCCCC---CcCC
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 73 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~----g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~l 73 (235)
||+|++|++++++.+.+.++||+|+.||+..++..+.+. |+.. +.+||++ +|.|++.+|++|+ +++|
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----g~aFPt~--vS~N~~aaH~tP~~gd~~vL 234 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----GWAFPTG--CSLNHCAAHYTPNTGDKTVL 234 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----cCCCCce--eecCccccCCCCCCCCCcEe
Confidence 689999999999999999999999999999988876654 4432 2568875 5789999999995 6899
Q ss_pred CCCCeEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCce-----
Q 026636 74 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG----- 148 (235)
Q Consensus 74 ~~Gd~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~----- 148 (235)
++||+|+||+|++++||++|++||+++| ++++++++++.+|++++++.++||++++||.++++++++++||.
T Consensus 235 k~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~ 311 (470)
T PTZ00053 235 TYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKT 311 (470)
T ss_pred cCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcc
Confidence 9999999999999999999999999996 68999999999999999999999999999999999999999973
Q ss_pred ----Eeeccceecccc-ccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecC---------------------
Q 026636 149 ----VVRQFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWD--------------------- 202 (235)
Q Consensus 149 ----~~~~~~GHgiG~-~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~--------------------- 202 (235)
++.+++|||||+ .+|+.|.+....+++..+|++||||+|||+++.+.++++...
T Consensus 312 f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~~~~~~~lk~~~a 391 (470)
T PTZ00053 312 YPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDPGAEFVPLRLPKA 391 (470)
T ss_pred cccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcCcCCcCCCCCHHH
Confidence 358999999998 899966655444567889999999999999999888763210
Q ss_pred ------------------------------------------CCceE-EecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 203 ------------------------------------------DNWTI-VTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 203 ------------------------------------------~~~~~-~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
..|.+ ..++|.+.+++|+||+++++|.|+||+
T Consensus 392 r~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~~~~vis~ 466 (470)
T PTZ00053 392 KQLLKHINTNFGTLAFCRRWLDRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPTCKEVLSR 466 (470)
T ss_pred HHHHHHHHHHCCCCCcchhhhhccchhHHHHHHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCCCCEecCC
Confidence 11123 336789999999999999999999995
No 31
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=1e-41 Score=292.06 Aligned_cols=232 Identities=21% Similarity=0.359 Sum_probs=199.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccC-----CCCCCCCCCeeeecCCCccccCCC--C--Cc
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS-----PLGYGGFPKSVCTSVNECICHGIP--D--SR 71 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~-----~~~~~~~~~~v~~g~~~~~~h~~~--~--~~ 71 (235)
||+|++|++++++.+.+.++||+|+.||++.++..+.++++... ...+.+||+++ +.|+..+|+.| + ++
T Consensus 22 ~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~v--SvN~~v~H~~P~~~d~~~ 99 (389)
T TIGR00495 22 YKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCI--SVNNCVGHFSPLKSDQDY 99 (389)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEE--ecCCeeeCCCCCCCCCCc
Confidence 68999999999999999999999999999999999988764211 01234577654 58999999998 3 48
Q ss_pred CCCCCCeEEEEEeeeeCCEEeeeEEEEEecC-----CCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCC
Q 026636 72 ALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYN 146 (235)
Q Consensus 72 ~l~~Gd~v~id~~~~~~Gy~~d~~Rt~~~G~-----~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G 146 (235)
+|++||+|+||+|++++||++|++||+++|+ ++++++++++++.+|++++++.+|||++++||.++++++++++|
T Consensus 100 ~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G 179 (389)
T TIGR00495 100 ILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYG 179 (389)
T ss_pred CcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999995 46789999999999999999999999999999999999999999
Q ss_pred ceEeeccceecccccccc-CCeE-ecccC-----CCCCcccCCcEEEEeeEEEcCCCCeeecCCCc--------------
Q 026636 147 YGVVRQFVGHGIGRVFHA-DPVV-LHYRN-----NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNW-------------- 205 (235)
Q Consensus 147 ~~~~~~~~GHgiG~~~~e-~p~~-~~~~~-----~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~-------------- 205 (235)
|.+..+++||++|..+|+ .|.| ..+.. ..+..|++||||+|||++..+++++..+++.|
T Consensus 180 ~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~~~~~~~y~lk 259 (389)
T TIGR00495 180 CTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYKRDPSKTYGLK 259 (389)
T ss_pred CeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEEECCCCCcCCC
Confidence 999999999999999998 7775 43321 24679999999999999999988875443222
Q ss_pred -----------------------------------------------eE-EecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 206 -----------------------------------------------TI-VTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 206 -----------------------------------------------~~-~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
.+ ..++|.+.+|+|+||+|+++|+++||.
T Consensus 260 ~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~g~~~~t~ 336 (389)
T TIGR00495 260 MKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPNGPMRITS 336 (389)
T ss_pred CHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCCCcEEeCC
Confidence 23 346789999999999999999999996
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.2e-40 Score=270.60 Aligned_cols=216 Identities=21% Similarity=0.266 Sum_probs=195.1
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
||+|+.|+.+++...+..-|+...|..|.+.++..++.+|++. ..|+|+|+.|.|+...||+.++..+.++|+|+
T Consensus 237 Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tIHY~~Nnq~l~d~emVL 311 (488)
T KOG2414|consen 237 MREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTIHYVRNNQLLKDDEMVL 311 (488)
T ss_pred HHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceEEEeecccccCCCcEEE
Confidence 7999999999999999999999999999999999999999976 46999999999999999999999999999999
Q ss_pred EEEeeeeCCEEeeeEEEEEe-cCCCHHHHHHHHHHHHHHHHHHHhccC--CCchhhHHHHHHHh----hhcCCce-----
Q 026636 81 IDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAP--GMEYKKIGKTIQDH----ADRYNYG----- 148 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~kp--G~~~~ev~~~~~~~----~~~~G~~----- 148 (235)
+|.|+.++||++|++|||.+ |+.++.|+++|+++++.++..++.++| |.++.+++....+. +++.|..
T Consensus 312 vDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~e 391 (488)
T KOG2414|consen 312 VDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDRE 391 (488)
T ss_pred EecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHH
Confidence 99999999999999999999 999999999999999999999999999 99999999886665 4555642
Q ss_pred -------EeeccceeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEE
Q 026636 149 -------VVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHT 221 (235)
Q Consensus 149 -------~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~ 221 (235)
.++|..||-+|+++|+.|.++ .+.+|+|||||+|||++|.|+. |.+-.+-.+.|+||||.
T Consensus 392 e~~~~~klcPHhVgHyLGmDVHD~p~v~-----r~~pL~pg~ViTIEPGvYIP~d--------~d~P~~FrGIGiRIEDD 458 (488)
T KOG2414|consen 392 EMIQAEKLCPHHVGHYLGMDVHDCPTVS-----RDIPLQPGMVITIEPGVYIPED--------DDPPEEFRGIGIRIEDD 458 (488)
T ss_pred HHHhhhhcCCcccchhcCcccccCCCCC-----CCccCCCCceEEecCceecCcc--------CCCchHhcCceEEeecc
Confidence 247889999999999999987 4779999999999999999743 22222236889999999
Q ss_pred EEEcCCceEecCC
Q 026636 222 ILITRDGAEILTQ 234 (235)
Q Consensus 222 v~vt~~g~e~Lt~ 234 (235)
|+|+++|+|+||.
T Consensus 459 V~i~edg~evLT~ 471 (488)
T KOG2414|consen 459 VAIGEDGPEVLTA 471 (488)
T ss_pred eEeccCCceeehh
Confidence 9999999999994
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=4e-36 Score=245.85 Aligned_cols=230 Identities=16% Similarity=0.209 Sum_probs=189.0
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccC----CCCCcCCCCC
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG----IPDSRALEDG 76 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~----~~~~~~l~~G 76 (235)
||.|++|++++..+++++++||+.|.|+.+.+.+....+|+-.+ .+|.+|-++|.|+...|| .|+++.++.|
T Consensus 194 iRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~vLHYgha~apNd~~iqdg 269 (492)
T KOG2737|consen 194 IRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAVLHYGHAGAPNDRTIQDG 269 (492)
T ss_pred HHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcceeeccccCCCCCcccCCC
Confidence 68999999999999999999999999999999999999988443 468888889999999998 7999999999
Q ss_pred CeEEEEEeeeeCCEEeeeEEEEEe-cCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhh----hcCCc----
Q 026636 77 DTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA----DRYNY---- 147 (235)
Q Consensus 77 d~v~id~~~~~~Gy~~d~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~----~~~G~---- 147 (235)
|++++|+|+.|.+|.+|||++|.. ||.+++|+.+|+++++++.++++.+|||+.+.|++....+++ ++.|.
T Consensus 270 d~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La~kvlle~laq~gIl~gd 349 (492)
T KOG2737|consen 270 DLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLAEKVLLEHLAQMGILKGD 349 (492)
T ss_pred CEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHhcCceecc
Confidence 999999999999999999999999 999999999999999999999999999999999999877763 44443
Q ss_pred -----------eEeeccceeccccccccC-CeEecc-cC--------CCCCcccCCcEEEEeeEEEcCCCCeee---cCC
Q 026636 148 -----------GVVRQFVGHGIGRVFHAD-PVVLHY-RN--------NDHGRMVLNQTFTIEPMLTIGSINPVM---WDD 203 (235)
Q Consensus 148 -----------~~~~~~~GHgiG~~~~e~-p~~~~~-~~--------~~~~~l~~gmv~~iep~~~~~~~~~~~---~~~ 203 (235)
..++|-+||-+|+++|+- .+...+ ++ ...+.|++|||+++||++|+.+.-+.. .|.
T Consensus 350 vd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEPGcYFi~~Ll~ealadp~ 429 (492)
T KOG2737|consen 350 VDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEPGCYFIDFLLDEALADPA 429 (492)
T ss_pred HHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecCChhHHHHHHHHHhcChH
Confidence 124788999999999983 111111 11 245689999999999999975332210 010
Q ss_pred --Cc---eEEe-cCCCeeEEEEEEEEEcCCceEecCC
Q 026636 204 --NW---TIVT-EDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 204 --~~---~~~~-~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
++ .++. -.+.+|+|+||.|+||++|+|.||.
T Consensus 430 ~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~ 466 (492)
T KOG2737|consen 430 RAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC 466 (492)
T ss_pred hhhhhhHHHHHHhhccCceEeeccEEEeccccccccC
Confidence 00 0011 1367899999999999999999985
No 34
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.94 E-value=2.2e-25 Score=192.87 Aligned_cols=206 Identities=16% Similarity=0.202 Sum_probs=171.8
Q ss_pred hHHHHHHHHHHHHHhhhCCCC--CCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeee-cCCCccccCCCC---CcCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT-SVNECICHGIPD---SRALED 75 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G--~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~-g~~~~~~h~~~~---~~~l~~ 75 (235)
|.|+.|++..-. +-+.+..| +||.+++..+++.=.++..+.. .+|++|.++ |+|.+++||.|. ++.+.+
T Consensus 322 rD~~Alve~~~w-le~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s~G~NgAviHYsP~~e~n~~i~~ 396 (606)
T KOG2413|consen 322 RDGAALVEYFAW-LEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSSVGPNGAVIHYSPPAETNRIVSP 396 (606)
T ss_pred hhHHHHHHHHHH-HhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeeccCCCCceeeecCCCccccceecC
Confidence 445555443322 22344556 8999999999887777755443 679999966 999999999985 469999
Q ss_pred CCeEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccC-CCchhhHHHHHHHhhhcCCceEeeccc
Q 026636 76 GDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP-GMEYKKIGKTIQDHADRYNYGVVRQFV 154 (235)
Q Consensus 76 Gd~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kp-G~~~~ev~~~~~~~~~~~G~~~~~~~~ 154 (235)
..+.++|.|++|.-=.+|+|||+.+|+|++++++.|..++..+-++.++.-| |.....++..++..+.+.|.. +.|-+
T Consensus 397 ~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gLD-y~HgT 475 (606)
T KOG2413|consen 397 DKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLD-YGHGT 475 (606)
T ss_pred ceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhccc-cCCCC
Confidence 9999999999999999999999999999999999999999999999888755 778888888999999999988 68899
Q ss_pred eecccc--ccccCCeEecccC-CCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCceE
Q 026636 155 GHGIGR--VFHADPVVLHYRN-NDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDGAE 230 (235)
Q Consensus 155 GHgiG~--~~~e~p~~~~~~~-~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g~e 230 (235)
|||+|. .+||+|....+++ ++...|++||++++||++|. +|.+|+|+|+.++|.+.+..
T Consensus 476 GHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~-----------------dg~fGIRienv~~vvd~~~~ 537 (606)
T KOG2413|consen 476 GHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK-----------------DGEFGIRIENVVEVVDAGTK 537 (606)
T ss_pred CcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc-----------------cCcceEEEeeEEEEEecccc
Confidence 999998 7899997555553 56788999999999999995 58899999999999777643
No 35
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.94 E-value=2.9e-25 Score=177.20 Aligned_cols=229 Identities=24% Similarity=0.374 Sum_probs=192.4
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCC---CcCCCCCC
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALEDGD 77 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~---~~~l~~Gd 77 (235)
+|+|+++..++.+.+.+.++||||..||+..++...++.-.+.....+.+||+. ++.|.+..||+|+ ..+|+..|
T Consensus 88 ~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG--~SlN~cAAHyTpNaGd~tVLqydD 165 (397)
T KOG2775|consen 88 LRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTG--CSLNHCAAHYTPNAGDKTVLKYDD 165 (397)
T ss_pred HHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCc--ccccchhhhcCCCCCCceeeeecc
Confidence 489999999999999999999999999999998766544333333334678876 6789999999984 47899999
Q ss_pred eEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCce---------
Q 026636 78 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG--------- 148 (235)
Q Consensus 78 ~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~--------- 148 (235)
+++||+|.+.+|-..|++.|+.| +|.+..++.+++++...+++..--.++.+||.++++++++++...
T Consensus 166 V~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEvEi~Gk~~~VK 242 (397)
T KOG2775|consen 166 VMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEINGKTYQVK 242 (397)
T ss_pred eEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEEEeCCceecce
Confidence 99999999999999999999999 678889999999999999999999999999999999999997643
Q ss_pred Eeeccceecccc-ccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecC-------------------------
Q 026636 149 VVRQFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWD------------------------- 202 (235)
Q Consensus 149 ~~~~~~GHgiG~-~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~------------------------- 202 (235)
+++++.||+|+. .+|-+..++....+..+.+++|..|+||.+-+.+.+++....
T Consensus 243 pIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~vplrl~~~K~ll 322 (397)
T KOG2775|consen 243 PIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGHVPLRLQRSKGLL 322 (397)
T ss_pred eccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhccccccccccHHHHHHH
Confidence 368889999998 678776666666678899999999999998887777652110
Q ss_pred ----C---------Cc--------------------------eEEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 203 ----D---------NW--------------------------TIVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 203 ----~---------~~--------------------------~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
+ .| .+...+|.+.+++|+||+..+.+.|++|+
T Consensus 323 ~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEVvsr 393 (397)
T KOG2775|consen 323 NTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEVVSR 393 (397)
T ss_pred HHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcchhcc
Confidence 1 11 14446799999999999999999999985
No 36
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.91 E-value=4.9e-24 Score=187.52 Aligned_cols=217 Identities=18% Similarity=0.257 Sum_probs=173.7
Q ss_pred ChHHHHHHHHHHHHH-----hhhCCCC--CCHHHHHHHHHHHHHHCC----CccCCCCCCCCCCeeeecCCCcc-ccCCC
Q 026636 1 MRVSGRLAAQVLEYA-----GTLVKPG--ITTDEIDKAVHQMIIDNG----AYPSPLGYGGFPKSVCTSVNECI-CHGIP 68 (235)
Q Consensus 1 mr~A~~i~~~~~~~~-----~~~~~~G--~te~el~~~~~~~~~~~g----~~~~~~~~~~~~~~v~~g~~~~~-~h~~~ 68 (235)
||+|++++...|... ..++-.+ +|...|...++..+.... ..+. ..-+.|+|++.+|.+.-. +...+
T Consensus 146 irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~-~~d~cY~PIiqSGg~ydlk~sa~s 224 (960)
T KOG1189|consen 146 IRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPD-LLDMCYPPIIQSGGKYDLKPSAVS 224 (960)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCcc-ccccccChhhhcCCcccccccccc
Confidence 588999999998833 3345555 677778888877776653 3331 122568999999888543 34445
Q ss_pred CCcCCCCCCeEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCce
Q 026636 69 DSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG 148 (235)
Q Consensus 69 ~~~~l~~Gd~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~ 148 (235)
++..| + +|+..+|++|++||++++||+.+ .|+.++++.|+.++.++++++..+|||++.++||.++.+++++.+..
T Consensus 225 ~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pe 300 (960)
T KOG1189|consen 225 DDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPE 300 (960)
T ss_pred ccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcc
Confidence 67777 4 99999999999999999999999 77999999999999999999999999999999999999999998876
Q ss_pred Eeecc---ceeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEc
Q 026636 149 VVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 225 (235)
Q Consensus 149 ~~~~~---~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt 225 (235)
..+.+ +|.|||+.+.|..++.+. .++.+|++||||.|..++..-.+. . ..+.+.+.+.|||+|+
T Consensus 301 l~~~~~k~lG~~iGlEFREssl~ina--Knd~~lk~gmvFni~lGf~nl~n~-----~------~~~~yaL~l~DTvlv~ 367 (960)
T KOG1189|consen 301 LVPNFTKNLGFGIGLEFRESSLVINA--KNDRVLKKGMVFNISLGFSNLTNP-----E------SKNSYALLLSDTVLVG 367 (960)
T ss_pred hhhhhhhhcccccceeeecccccccc--cchhhhccCcEEEEeeccccccCc-----c------cccchhhhccceeeec
Confidence 43333 899999999999886654 578999999999999887653211 0 1245889999999999
Q ss_pred CCce-EecCCC
Q 026636 226 RDGA-EILTQC 235 (235)
Q Consensus 226 ~~g~-e~Lt~~ 235 (235)
++++ ++||.+
T Consensus 368 e~~p~~vLT~~ 378 (960)
T KOG1189|consen 368 EDPPAEVLTDS 378 (960)
T ss_pred CCCcchhhccc
Confidence 9996 999964
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.82 E-value=1.7e-18 Score=141.76 Aligned_cols=231 Identities=22% Similarity=0.405 Sum_probs=183.5
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCC--cc---CCCCCCCCCCeeeecCCCccccCCC--C--CcC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YP---SPLGYGGFPKSVCTSVNECICHGIP--D--SRA 72 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~--~~---~~~~~~~~~~~v~~g~~~~~~h~~~--~--~~~ 72 (235)
|-|++|+.++++.+.+.+.||.+-.||+...+..+.++-. +. ....+..||+. ++.|.+.+|+.| + +..
T Consensus 25 k~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~--Isvnncv~h~sPlksd~~~~ 102 (398)
T KOG2776|consen 25 KMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTS--ISVNNCVCHFSPLKSDADYT 102 (398)
T ss_pred hhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccce--ecccceeeccCcCCCCCccc
Confidence 6799999999999999999999999999998888776621 11 12223567765 578999999987 2 578
Q ss_pred CCCCCeEEEEEeeeeCCEEeeeEEEEEecCCC-----HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCc
Q 026636 73 LEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-----DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 147 (235)
Q Consensus 73 l~~Gd~v~id~~~~~~Gy~~d~~Rt~~~G~~~-----~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~ 147 (235)
|++||+|+||+|.+++||.+.++.|++++.++ ....++..++..|.+++++.++||.+-..|.+++.+.+.++++
T Consensus 103 Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT~~i~k~aas~~c 182 (398)
T KOG2776|consen 103 LKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVTRAIVKTAASYGC 182 (398)
T ss_pred ccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHhCC
Confidence 99999999999999999999999999998643 5778999999999999999999999999999999999999999
Q ss_pred eEeeccceeccccccccC--CeEeccc-----CCCCCcccCCcEEEEeeEEEcCCCCeeecC------------------
Q 026636 148 GVVRQFVGHGIGRVFHAD--PVVLHYR-----NNDHGRMVLNQTFTIEPMLTIGSINPVMWD------------------ 202 (235)
Q Consensus 148 ~~~~~~~GHgiG~~~~e~--p~~~~~~-----~~~~~~l~~gmv~~iep~~~~~~~~~~~~~------------------ 202 (235)
.+......|..=..+.++ ..+.... .-....++++.|++++..++.++++....+
T Consensus 183 ~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~y~kd~~~~y~LK 262 (398)
T KOG2776|consen 183 KPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTIYYKDESVSYMLK 262 (398)
T ss_pred cccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCcccccccccceeEEeccchHHHHH
Confidence 877666677655543332 2233221 135578999999999988888777542110
Q ss_pred --------------------------------------------CCce-EEecCCCeeEEEEEEEEEcCCceEecCC
Q 026636 203 --------------------------------------------DNWT-IVTEDGSLSAQFEHTILITRDGAEILTQ 234 (235)
Q Consensus 203 --------------------------------------------~~~~-~~~~~g~~g~~~ed~v~vt~~g~e~Lt~ 234 (235)
..+. +..+++....+++-|+++.++|.-.||.
T Consensus 263 lKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~TvllmPng~~~l~~ 339 (398)
T KOG2776|consen 263 LKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLMPNGSLRLTG 339 (398)
T ss_pred HHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEeccCCCccccC
Confidence 0112 3447899999999999999999888874
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.67 E-value=5.1e-16 Score=135.21 Aligned_cols=172 Identities=15% Similarity=0.119 Sum_probs=137.4
Q ss_pred CCCCCeeeecCCC-ccccCCCCCcCCCCCCeEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccC
Q 026636 49 GGFPKSVCTSVNE-CICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP 127 (235)
Q Consensus 49 ~~~~~~v~~g~~~-~~~h~~~~~~~l~~Gd~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kp 127 (235)
+.|.|++.+|..- ..+.....+..+- ||+|...+|.+|+|||++++||+++ +|+.+|++-|+.+..+|..++..+||
T Consensus 243 w~ytpiiqsg~~~Dl~psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i~~~~rp 320 (1001)
T COG5406 243 WCYTPIIQSGGSIDLTPSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYILGLVRP 320 (1001)
T ss_pred hhcchhhccCceeecccccccCchhhc-CceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHHHhhcCC
Confidence 4578888887653 2233334556665 8999999999999999999999999 78999999999999999999999999
Q ss_pred CCchhhHHHHHHHhhhcCCceEeecc---ceeccccccccCCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCC
Q 026636 128 GMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDN 204 (235)
Q Consensus 128 G~~~~ev~~~~~~~~~~~G~~~~~~~---~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~ 204 (235)
|.+.++||..+.+++++.|...-+++ .|-+||+...+...+.+. .++.+|+.||+|.|..++..--+ +-+
T Consensus 321 G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nv--kn~r~lq~g~~fnis~gf~nl~~---~~~-- 393 (1001)
T COG5406 321 GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNV--KNGRVLQAGCIFNISLGFGNLIN---PHP-- 393 (1001)
T ss_pred CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceec--cCCceeccccEEEEeecccccCC---CCc--
Confidence 99999999999999999987654444 799999988887666554 45689999999999876543210 000
Q ss_pred ceEEecCCCeeEEEEEEEEEcCCceEecCCC
Q 026636 205 WTIVTEDGSLSAQFEHTILITRDGAEILTQC 235 (235)
Q Consensus 205 ~~~~~~~g~~g~~~ed~v~vt~~g~e~Lt~~ 235 (235)
.+.+...+-||+-|+-+.+.++|++
T Consensus 394 ------~Nnyal~l~dt~qi~ls~p~~~t~~ 418 (1001)
T COG5406 394 ------KNNYALLLIDTEQISLSNPIVFTDS 418 (1001)
T ss_pred ------ccchhhhhccceEeecCCceecccC
Confidence 1456788889999988888888864
No 39
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.93 E-value=0.0002 Score=57.99 Aligned_cols=101 Identities=13% Similarity=0.202 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEee-cccee--ccccccccCCeEecccCCCCCcccC
Q 026636 105 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR-QFVGH--GIGRVFHADPVVLHYRNNDHGRMVL 181 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~-~~~GH--giG~~~~e~p~~~~~~~~~~~~l~~ 181 (235)
+.+|++.+.+.++++++++.++||++-.||..++++.+.+.|..... ...++ .+.... ...+.+.. ..+.+|++
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~h~~-~~~~~l~~ 78 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSV--NEVVCHGI-PDDRVLKD 78 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCC--CCceeCCC-CCCcccCC
Confidence 35789999999999999999999999999999999999998875311 00011 111110 01111111 24679999
Q ss_pred CcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 182 NQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 182 gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
|+++.++++... +++...+..|+.+++
T Consensus 79 Gd~v~id~g~~~------------------~GY~ad~~RT~~~G~ 105 (238)
T cd01086 79 GDIVNIDVGVEL------------------DGYHGDSARTFIVGE 105 (238)
T ss_pred CCEEEEEEEEEE------------------CCEEEEEEEEEECCC
Confidence 999999998765 356779999999965
No 40
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.74 E-value=0.0004 Score=60.41 Aligned_cols=116 Identities=9% Similarity=0.130 Sum_probs=79.9
Q ss_pred EEeeeEEEEEecCCC--HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEe-ecccee--cccccccc
Q 026636 90 YHGDTSATFFCGDVD--DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV-RQFVGH--GIGRVFHA 164 (235)
Q Consensus 90 y~~d~~Rt~~~G~~~--~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~-~~~~GH--giG~~~~e 164 (235)
..+++.++..+..+. +.+|++-+.+.++++++.+.+|||++-.||.+++++.+.+.|..+. .++.+. ++...+.+
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~ 206 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNE 206 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecccc
Confidence 356777888886655 4577888888999999999999999999999999999877764321 111111 11111111
Q ss_pred CCeEecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 165 DPVVLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 165 ~p~~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
.+.+.. .++.+|++|+++.++.+.+. +++-.-+..|++|++
T Consensus 207 --~i~Hgi-p~~r~L~~GDiV~iDvg~~~------------------~GY~aD~tRT~~VG~ 247 (396)
T PLN03158 207 --VICHGI-PDARKLEDGDIVNVDVTVYY------------------KGCHGDLNETFFVGN 247 (396)
T ss_pred --cccCCC-CCCccCCCCCEEEEEEeEEE------------------CCEEEeEEeEEEcCC
Confidence 112211 24678999999999999886 345668899999864
No 41
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.72 E-value=0.00051 Score=57.46 Aligned_cols=97 Identities=13% Similarity=0.195 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceeccccccccCCeEecccC--CCCCcccCC
Q 026636 105 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLN 182 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~~~~~~--~~~~~l~~g 182 (235)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+.|... ++.++....+ ...++.+ +++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~-----afp~~is~n~--~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP-----AFPVNLSINE--CAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCceeccCC--EeeCCCCCCCCCcccCCC
Confidence 357888999999999999999999999999999999999988431 2222222222 2222222 346789999
Q ss_pred cEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 183 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 183 mv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
+++.++.+... .++..-+.-|+.+.+
T Consensus 75 DvV~iD~G~~~------------------dGY~sD~arT~~vg~ 100 (291)
T cd01088 75 DVVKLDFGAHV------------------DGYIADSAFTVDFDP 100 (291)
T ss_pred CEEEEEEEEEE------------------CCEEEEEEEEEecCh
Confidence 99999998875 245566666776653
No 42
>PRK05716 methionine aminopeptidase; Validated
Probab=97.66 E-value=0.0011 Score=54.24 Aligned_cols=102 Identities=11% Similarity=0.091 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEee-ccceeccccccccCCeEecccCCCCCcccCCcE
Q 026636 106 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR-QFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQT 184 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~-~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~gmv 184 (235)
.+|++.+.+.++++++++.++||++-.||.+++++.+.+.|..... ...++..-........+.+. ..++.+|++|++
T Consensus 13 ~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~-~~~~~~l~~Gd~ 91 (252)
T PRK05716 13 KMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHG-IPSDKVLKEGDI 91 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecC-CCCCcccCCCCE
Confidence 3578888889999999999999999999999999999998875311 11111100000000111111 125679999999
Q ss_pred EEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 185 FTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 185 ~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
+.++.+... +++..-+.-|+.+.+
T Consensus 92 v~id~g~~~------------------~gY~~d~~RT~~vG~ 115 (252)
T PRK05716 92 VNIDVTVIK------------------DGYHGDTSRTFGVGE 115 (252)
T ss_pred EEEEEEEEE------------------CCEEEEeEEEEECCC
Confidence 999998876 456778888888743
No 43
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.60 E-value=0.0013 Score=53.90 Aligned_cols=112 Identities=10% Similarity=0.088 Sum_probs=74.8
Q ss_pred eEEEEEecCCCH--HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeec-ccee--ccccccccCCeE
Q 026636 94 TSATFFCGDVDD--EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ-FVGH--GIGRVFHADPVV 168 (235)
Q Consensus 94 ~~Rt~~~G~~~~--~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~-~~GH--giG~~~~e~p~~ 168 (235)
-.|++.+-.+.+ .+|++.+.+.++++++.+.++||++-.||...++..+.+.|...... ..++ .+.... ...+
T Consensus 4 ~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--n~~~ 81 (255)
T PRK12896 4 EGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISV--NEEV 81 (255)
T ss_pred cCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecC--CCee
Confidence 357777744333 45677778888888888999999999999999999999988763111 1111 111111 1111
Q ss_pred ecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 169 LHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 169 ~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
.+.. .++.+|++|+++.++.+... +++..-+.-|+++.+
T Consensus 82 ~h~~-p~~~~l~~Gd~v~iD~g~~~------------------~gY~aD~~RT~~vG~ 120 (255)
T PRK12896 82 AHGI-PGPRVIKDGDLVNIDVSAYL------------------DGYHGDTGITFAVGP 120 (255)
T ss_pred EecC-CCCccCCCCCEEEEEEeEEE------------------CcEEEeeEEEEECCC
Confidence 2211 24578999999999998765 356777888888753
No 44
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.60 E-value=0.0013 Score=51.37 Aligned_cols=100 Identities=20% Similarity=0.237 Sum_probs=72.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 1 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 1 mr~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
++++.+.+.++++.+++.++||++-.||...+.+.+.+.|....... .....+.........-...++.+|++|.++.
T Consensus 104 ~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~--~~Gh~iG~~~~e~~~~~~~~~~~l~~gmv~~ 181 (207)
T cd01066 104 QRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGH--RTGHGIGLEIHEPPVLKAGDDTVLEPGMVFA 181 (207)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCC--CCccccCcccCCCCCcCCCCCCCcCCCCEEE
Confidence 46788999999999999999999999999999999999987321111 1111222222211111123568999999999
Q ss_pred EEEeeeeC-CEEeeeEEEEEecC
Q 026636 81 IDVTVYLN-GYHGDTSATFFCGD 102 (235)
Q Consensus 81 id~~~~~~-Gy~~d~~Rt~~~G~ 102 (235)
++.+.... ++..-+.-|+++.+
T Consensus 182 iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 182 VEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred ECCEEEECCCcEEEeeeEEEEeC
Confidence 99998876 58899999999853
No 45
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.46 E-value=0.0025 Score=50.23 Aligned_cols=97 Identities=22% Similarity=0.219 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCC-CCCcCCCCCCeEE
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-PDSRALEDGDTIN 80 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~-~~~~~l~~Gd~v~ 80 (235)
|++.+.+.++++.+++.++||++-.||.+.+.+.+.+.|..+.+.. .....+.....+. +... .++.+|++|.++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~--~~Gh~iG~~~~e~-p~i~~~~~~~l~~gmv~~ 182 (208)
T cd01092 106 KEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIH--RTGHGVGLEVHEA-PYISPGSDDVLEEGMVFT 182 (208)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCC--CCccccCcccCcC-CCcCCCCCCCcCCCCEEE
Confidence 5778888999999999999999999999999999999997432111 1111121111111 1112 2578999999999
Q ss_pred EEEeeeeCC-EEeeeEEEEEec
Q 026636 81 IDVTVYLNG-YHGDTSATFFCG 101 (235)
Q Consensus 81 id~~~~~~G-y~~d~~Rt~~~G 101 (235)
|+.+....| +..-+.-|+++.
T Consensus 183 iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 183 IEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred ECCeEEecCCCEEEeeeEEEEC
Confidence 998876544 455678888874
No 46
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=97.46 E-value=0.003 Score=51.43 Aligned_cols=86 Identities=14% Similarity=0.124 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceE-eeccce--eccccccccCCeEecccCCCCCcccCC
Q 026636 106 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG--HGIGRVFHADPVVLHYRNNDHGRMVLN 182 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~-~~~~~G--HgiG~~~~e~p~~~~~~~~~~~~l~~g 182 (235)
.+|++=+.+.++++.+.+.++||++..||.+.+++++++.|.-+ +.+.-| -.+..++-|. +.++-|+++.+|++|
T Consensus 13 k~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~--v~HgiP~d~~vlk~G 90 (255)
T COG0024 13 KMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEV--VAHGIPGDKKVLKEG 90 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhhe--eeecCCCCCcccCCC
Confidence 35666667788888888999999999999999999999876543 112212 2333333222 222233467899999
Q ss_pred cEEEEeeEEEc
Q 026636 183 QTFTIEPMLTI 193 (235)
Q Consensus 183 mv~~iep~~~~ 193 (235)
.++.|+.++..
T Consensus 91 Div~IDvg~~~ 101 (255)
T COG0024 91 DIVKIDVGAHI 101 (255)
T ss_pred CEEEEEEEEEE
Confidence 99999999886
No 47
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.39 E-value=0.0035 Score=51.03 Aligned_cols=98 Identities=19% Similarity=0.128 Sum_probs=69.4
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCC--ccccCC--CCCcCCCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGI--PDSRALEDGD 77 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~--~~~h~~--~~~~~l~~Gd 77 (235)
|++.+++.++++++++.++||++-.||...+.+.+.+.|.... ..+.++ .+.....+ ..+.+. .++.+|++|.
T Consensus 119 ~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~gm 195 (247)
T TIGR00500 119 EKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKEGM 195 (247)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecCCC
Confidence 5667788889999999999999999999999999999987542 112222 22222221 122221 2468999999
Q ss_pred eEEEEEeeee------------------CCEEeeeEEEEEecC
Q 026636 78 TINIDVTVYL------------------NGYHGDTSATFFCGD 102 (235)
Q Consensus 78 ~v~id~~~~~------------------~Gy~~d~~Rt~~~G~ 102 (235)
++.++.+... +.+..-+..|++|.+
T Consensus 196 v~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 196 VFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred EEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 9999987654 346777888998854
No 48
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=97.29 E-value=0.0029 Score=51.57 Aligned_cols=99 Identities=15% Similarity=0.124 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCC--ccCCCCCCCCCCeeeecCCCccccCCC-CCcCCCCCCe
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 78 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~--~~~~~~~~~~~~~v~~g~~~~~~h~~~-~~~~l~~Gd~ 78 (235)
|++-+++.++.+++++.+|||++-.||...+.+.+.+.+. ...+. .+....+....++....-.+ ++++|++|.+
T Consensus 122 ~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~--~~~GHgiGle~hE~~~~l~~~~~~~L~~GMv 199 (243)
T cd01091 122 QKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFT--KNLGFGIGLEFRESSLIINAKNDRKLKKGMV 199 (243)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCc--CCcccccCcccccCccccCCCCCCCcCCCCE
Confidence 5678889999999999999999999999999999988763 22111 11222232223332111122 4689999999
Q ss_pred EEEEEeee-e----------CCEEeeeEEEEEecC
Q 026636 79 INIDVTVY-L----------NGYHGDTSATFFCGD 102 (235)
Q Consensus 79 v~id~~~~-~----------~Gy~~d~~Rt~~~G~ 102 (235)
+.+..|.. + ..|..-++-|++|.+
T Consensus 200 f~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 200 FNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred EEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 99999885 3 268889999999954
No 49
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=97.28 E-value=0.0057 Score=49.31 Aligned_cols=98 Identities=15% Similarity=0.126 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccC------CCCCcCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG------IPDSRALED 75 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~------~~~~~~l~~ 75 (235)
|++.+++.++++++++.+|||++-.||.+.+++.+.+.|...... .++...+....+.. +|. ..++.+|++
T Consensus 112 ~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~Le~ 188 (228)
T cd01090 112 LKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVLEP 188 (228)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCccCC
Confidence 567788999999999999999999999999999999998654211 11222222222221 211 124689999
Q ss_pred CCeEEEEEeeeeC----C-EEeeeEEEEEecC
Q 026636 76 GDTINIDVTVYLN----G-YHGDTSATFFCGD 102 (235)
Q Consensus 76 Gd~v~id~~~~~~----G-y~~d~~Rt~~~G~ 102 (235)
|.++.++.+..+. | .-.-+..|++|.+
T Consensus 189 GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 189 GMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 9999999987652 2 3445888988854
No 50
>PRK15173 peptidase; Provisional
Probab=97.23 E-value=0.0049 Score=52.39 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=69.0
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCC-CCCcCCCCCCeEE
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI-PDSRALEDGDTIN 80 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~-~~~~~l~~Gd~v~ 80 (235)
|++.+++.++++++++.++||++-.||...+.+.+.+.|.......+.++...+..|.+.. |... .++.+|++|.++.
T Consensus 205 ~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~-P~i~~~~~~~Le~GMV~t 283 (323)
T PRK15173 205 RKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEES-PFVSTHATESFTSGMVLS 283 (323)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCC-CCCCCCCCCccCCCCEEE
Confidence 5677888999999999999999999999999999999987432111111211111122221 2222 2467999999999
Q ss_pred EEEeeee-CCEEeeeEEEEEecC
Q 026636 81 IDVTVYL-NGYHGDTSATFFCGD 102 (235)
Q Consensus 81 id~~~~~-~Gy~~d~~Rt~~~G~ 102 (235)
++.+... +-+..-+..|++|.+
T Consensus 284 iEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 284 LETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred ECCEEEcCCCcEEEEeeEEEEcC
Confidence 9988753 334467899999943
No 51
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=97.16 E-value=0.0078 Score=47.50 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHh-hhcCCceEeeccceeccccccccCCeEecccCCCCCcccCCc
Q 026636 105 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH-ADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 183 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~-~~~~G~~~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~gm 183 (235)
+.+|++-+.+.++++++++.++||+|-.||.+.+.+. +.+.|........-=+.|.. ..+.++. .++.+|++|+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~----~~~~~~~-~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPN----TDLPHYT-PTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCC----CGETTTB-CCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCc----ceeccee-ccceeeecCC
Confidence 3578899999999999999999999999999999998 67777442211111111211 1111221 2577899999
Q ss_pred EEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEc
Q 026636 184 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 225 (235)
Q Consensus 184 v~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt 225 (235)
++.++-+... +++-..+.-|+++.
T Consensus 76 ~v~id~~~~~------------------~gy~~d~~Rt~~~G 99 (207)
T PF00557_consen 76 IVIIDFGPRY------------------DGYHADIARTFVVG 99 (207)
T ss_dssp EEEEEEEEEE------------------TTEEEEEEEEEESS
T ss_pred cceeecccee------------------eeeEeeeeeEEEEe
Confidence 9999988765 35677788888764
No 52
>PRK14575 putative peptidase; Provisional
Probab=97.10 E-value=0.0072 Score=53.01 Aligned_cols=98 Identities=11% Similarity=0.081 Sum_probs=69.5
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeee--ecCCCccccCC-CCCcCCCCCCe
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGI-PDSRALEDGDT 78 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~--~g~~~~~~h~~-~~~~~l~~Gd~ 78 (235)
|++.+++.++.+++++.+|||++-.||.+.+.+.+.+.|....+... +...+. .|.... +... .++.+|++|.+
T Consensus 288 ~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~-P~i~~~~~~~Le~GMv 364 (406)
T PRK14575 288 RKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEES-PFVSTHATESFTSGMV 364 (406)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccC-CCCCCCCCCCcCCCCE
Confidence 56788899999999999999999999999999999999874322111 122222 122221 1111 24678999999
Q ss_pred EEEEEeeeeCC-EEeeeEEEEEecC
Q 026636 79 INIDVTVYLNG-YHGDTSATFFCGD 102 (235)
Q Consensus 79 v~id~~~~~~G-y~~d~~Rt~~~G~ 102 (235)
+.++.+....| +..-+.-|+++.+
T Consensus 365 ~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 365 LSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred EEECCeeecCCCcEEEEEeEEEEcC
Confidence 99998876433 4567899999954
No 53
>PRK12897 methionine aminopeptidase; Reviewed
Probab=97.05 E-value=0.0061 Score=49.76 Aligned_cols=98 Identities=17% Similarity=0.195 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCC--ccccCC-C-CCcCCCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGI-P-DSRALEDGD 77 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~--~~~h~~-~-~~~~l~~Gd 77 (235)
|++-+++.++++++++.++||++-.|+...++..+.+.|.... ..+.++ .+.....+ ...++. + ++.+|++|.
T Consensus 120 ~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~Gm 196 (248)
T PRK12897 120 EKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQEGM 196 (248)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCCCC
Confidence 5677888899999999999999999999999999999987431 111112 22222221 122222 2 356899999
Q ss_pred eEEEEEeee-----------------eCC-EEeeeEEEEEecC
Q 026636 78 TINIDVTVY-----------------LNG-YHGDTSATFFCGD 102 (235)
Q Consensus 78 ~v~id~~~~-----------------~~G-y~~d~~Rt~~~G~ 102 (235)
++.+..+.. ++| +...+..|++|.+
T Consensus 197 v~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 197 VITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred EEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 999998876 244 6778888998854
No 54
>PRK14576 putative endopeptidase; Provisional
Probab=97.03 E-value=0.012 Score=51.65 Aligned_cols=100 Identities=14% Similarity=0.087 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCC-CCcCCCCCCeEE
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTIN 80 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~-~~~~l~~Gd~v~ 80 (235)
+++.+++.++.+++++++|||++-.||...+.+.+.+.|....+....++......|... .+...+ ++.+|++|.++.
T Consensus 287 ~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e-~P~i~~~~~~~Le~GMv~~ 365 (405)
T PRK14576 287 QQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEE-VPFVSTQATETFCPGMVLS 365 (405)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCc-CCCcCCCCCCccCCCCEEE
Confidence 566788899999999999999999999999999999999743221111221111123222 233222 568999999999
Q ss_pred EEEeeeeCC-EEeeeEEEEEecC
Q 026636 81 IDVTVYLNG-YHGDTSATFFCGD 102 (235)
Q Consensus 81 id~~~~~~G-y~~d~~Rt~~~G~ 102 (235)
++.+....| ...-+.-|++|.+
T Consensus 366 vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 366 LETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred ECCceeecCCCEEEEeeEEEECC
Confidence 987654333 3455789999843
No 55
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.99 E-value=0.008 Score=52.47 Aligned_cols=97 Identities=15% Similarity=0.220 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCc----cccCCC-CCcCCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC----ICHGIP-DSRALEDG 76 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~----~~h~~~-~~~~l~~G 76 (235)
+++.+++.++.+++++.++||++-.||...+.+.+.+.|..... ..++ .+..+.... .+.-.+ ++.+|++|
T Consensus 273 ~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~h--~~Gh--giGl~~~~~~~e~~~~l~~~~~~~L~~G 348 (391)
T TIGR02993 273 LDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKDS--RTGY--PIGLSYPPDWGERTMSLRPGDNTVLKPG 348 (391)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccCC--Ccee--eeccCcCCCCCCccccccCCCCceecCC
Confidence 56778899999999999999999999999999999999875321 1122 222111100 111122 46899999
Q ss_pred CeEEEEEeeeeCCEEeeeEEEEEecC
Q 026636 77 DTINIDVTVYLNGYHGDTSATFFCGD 102 (235)
Q Consensus 77 d~v~id~~~~~~Gy~~d~~Rt~~~G~ 102 (235)
.++.++-+....|+..-+.-|++|.+
T Consensus 349 Mv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 349 MTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred CEEEEcceeEeCCCCeEEeeEEEECC
Confidence 99999999887777778889999953
No 56
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.98 E-value=0.008 Score=50.15 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=66.8
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCC--ccccC-C-CCCcCCCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHG-I-PDSRALEDGD 77 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~--~~~h~-~-~~~~~l~~Gd 77 (235)
|++.+++.++++++++.++||++-.||...++..+.+.|... ...+.++ .+.....+ ..+++ . ..+.+|++|.
T Consensus 151 ~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~GM 227 (286)
T PRK07281 151 KNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLREGM 227 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECCCC
Confidence 678889999999999999999999999999999999887643 1111122 12111111 12222 1 2457899999
Q ss_pred eEEEEEeeeeC-------------------CEEeeeEEEEEec
Q 026636 78 TINIDVTVYLN-------------------GYHGDTSATFFCG 101 (235)
Q Consensus 78 ~v~id~~~~~~-------------------Gy~~d~~Rt~~~G 101 (235)
++.|+.+.... +..+.+.-|++|.
T Consensus 228 V~tiEPgiy~~~~~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT 270 (286)
T PRK07281 228 VLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVIT 270 (286)
T ss_pred EEEECCeeEcCCcceecccCCCceEEecCCCcEEEeccEEEEe
Confidence 99999888542 2336677888874
No 57
>PRK09795 aminopeptidase; Provisional
Probab=96.98 E-value=0.013 Score=50.57 Aligned_cols=98 Identities=17% Similarity=0.180 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCC-CCcCCCCCCeEE
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTIN 80 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~-~~~~l~~Gd~v~ 80 (235)
+++-+++.++.+++++.++||++-.||.+.+++.+.+.|....+... ....+.....+. |...+ ++.+|++|.++.
T Consensus 243 ~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~--~GHgiGl~~he~-p~i~~~~~~~l~~gmv~~ 319 (361)
T PRK09795 243 FNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHN--TGHAIGIEVHED-PRFSPRDTTTLQPGMLLT 319 (361)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCC--CCccCCccccCC-CCcCCCCCCCcCCCCEEE
Confidence 45667788888999999999999999999999999999864322111 122222222221 22222 468999999999
Q ss_pred EEEeeeeCC-EEeeeEEEEEecC
Q 026636 81 IDVTVYLNG-YHGDTSATFFCGD 102 (235)
Q Consensus 81 id~~~~~~G-y~~d~~Rt~~~G~ 102 (235)
|+.+....| .-.-+.-|++|.+
T Consensus 320 iEpgiy~~~~~gvriEd~v~vt~ 342 (361)
T PRK09795 320 VEPGIYLPGQGGVRIEDVVLVTP 342 (361)
T ss_pred ECCEEEeCCCCEEEEeeEEEECC
Confidence 999886554 3467788998843
No 58
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.94 E-value=0.018 Score=50.24 Aligned_cols=103 Identities=14% Similarity=0.203 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeec--cceecccc--ccccCCeEecccC--C-CCCc
Q 026636 106 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIGR--VFHADPVVLHYRN--N-DHGR 178 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~--~~GHgiG~--~~~e~p~~~~~~~--~-~~~~ 178 (235)
.++++-+.+..+++.+++.++||++..||.+.+++.+++.+-..+.. ...+|+.. .+--...+.++.+ + ++.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~~~d~~~~ 100 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYI 100 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCCCCCCCcC
Confidence 35666677788888888999999999999999888888754221111 01122111 0111112222222 2 3478
Q ss_pred ccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 179 MVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 179 l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
|++|.++.|+.+... +++..-+..|+.|.+
T Consensus 101 Lk~GDvVkIDlG~~i------------------dGY~aD~arTv~vG~ 130 (389)
T TIGR00495 101 LKEGDVVKIDLGCHI------------------DGFIALVAHTFVVGV 130 (389)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEECC
Confidence 999999999999876 457788899999974
No 59
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.94 E-value=0.021 Score=47.85 Aligned_cols=95 Identities=20% Similarity=0.185 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCC-----CccccCC-CCCcCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-----ECICHGI-PDSRALED 75 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~-----~~~~h~~-~~~~~l~~ 75 (235)
+++.+.+.++++++++.++||++-.||.+.+++.+.+.|..+. ....++. +|.. ..++... .++.+|++
T Consensus 104 ~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~~~he~p~ip~~~~~~~~~le~ 178 (291)
T PRK08671 104 EDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERYELHAGPSIPNYDEGGGVKLEE 178 (291)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCCcccCCCccCccCCCCCceeCC
Confidence 4567788889999999999999999999999999999997652 1111221 2211 1122222 24688999
Q ss_pred CCeEEEEEeee-eCCEEeeeEEEEEec
Q 026636 76 GDTINIDVTVY-LNGYHGDTSATFFCG 101 (235)
Q Consensus 76 Gd~v~id~~~~-~~Gy~~d~~Rt~~~G 101 (235)
|+++.|+.... -.|+..|-.+|-++.
T Consensus 179 GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 179 GDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred CCEEEEcceEECCCCeEecCCceEEEe
Confidence 99999998765 567888888887774
No 60
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=96.90 E-value=0.018 Score=48.23 Aligned_cols=96 Identities=10% Similarity=0.130 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceeccccccccCCeEecccC--CCCCcccCCc
Q 026636 106 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLNQ 183 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~~~~~~--~~~~~l~~gm 183 (235)
.++++-+.+..+++.+.+.++||++..||.+.+++.+.+.|... .+ .-.+.. .....++.+ +++.+|++|+
T Consensus 7 ~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~--aF-p~~vs~----n~~~~H~~p~~~d~~~l~~GD 79 (295)
T TIGR00501 7 KWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP--AF-PCNISI----NECAAHFTPKAGDKTVFKDGD 79 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC--CC-Ccceec----CCEeeCCCCCCCcCccCCCCC
Confidence 46777788888899999999999999999999999999987542 11 000111 111112211 2456899999
Q ss_pred EEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 184 TFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 184 v~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
++.++.+... .++..-+..|+.+.+
T Consensus 80 vV~iD~G~~~------------------dGY~aD~arT~~vG~ 104 (295)
T TIGR00501 80 VVKLDLGAHV------------------DGYIADTAITVDLGD 104 (295)
T ss_pred EEEEEEeEEE------------------CCEEEEEEEEEEeCc
Confidence 9999998875 346677778888764
No 61
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.84 E-value=0.016 Score=48.49 Aligned_cols=84 Identities=19% Similarity=0.230 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCC--ccccCCC-CCcCCCCCCe
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIP-DSRALEDGDT 78 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~--~~~h~~~-~~~~l~~Gd~ 78 (235)
|++.+++.++++++++.++||++-.||...+.+.+.+.|..... .+.++ .+.....+ .++++.+ .+.+|++|.+
T Consensus 161 ~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~~-~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~GMV 237 (291)
T PRK12318 161 KKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVVD-QFVGH--GVGIKFHENPYVPHHRNSSKIPLAPGMI 237 (291)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCC-CcccC--CcCccccCCCcccCcCCCCCCEeCCCCE
Confidence 56778888999999999999999999999999999999875321 11222 22222222 1222222 3478999999
Q ss_pred EEEEEeeeeC
Q 026636 79 INIDVTVYLN 88 (235)
Q Consensus 79 v~id~~~~~~ 88 (235)
+.|+.+....
T Consensus 238 ~~iEP~i~~~ 247 (291)
T PRK12318 238 FTIEPMINVG 247 (291)
T ss_pred EEECCEEEcC
Confidence 9999776543
No 62
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.80 E-value=0.037 Score=44.51 Aligned_cols=103 Identities=17% Similarity=0.208 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeec--cceeccccc--cccCCeEecccC---CCCCc
Q 026636 106 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIGRV--FHADPVVLHYRN---NDHGR 178 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~--~~GHgiG~~--~~e~p~~~~~~~---~~~~~ 178 (235)
.+|++-+.+.++++.+++.++||++-.||..++++.+++..-..+.. ....+.... +.-.....++.+ .++.+
T Consensus 3 ~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~~~ 82 (228)
T cd01089 3 KYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDATYT 82 (228)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCCcc
Confidence 57888899999999999999999999999877777766632111111 111111110 000011111111 25678
Q ss_pred ccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcC
Q 026636 179 MVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITR 226 (235)
Q Consensus 179 l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~ 226 (235)
|++|+++.++.+... .++..-+..|+.|.+
T Consensus 83 l~~Gd~v~iD~g~~~------------------~GY~sD~tRT~~vG~ 112 (228)
T cd01089 83 LKDGDVVKIDLGCHI------------------DGYIAVVAHTIVVGA 112 (228)
T ss_pred cCCCCEEEEEEEEEE------------------CCEEEEEEEEEEeCC
Confidence 999999999988765 356777888998864
No 63
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.72 E-value=0.023 Score=46.16 Aligned_cols=100 Identities=16% Similarity=0.163 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCC----cc------------CCCCCCCCCCeeeecCCCcccc
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA----YP------------SPLGYGGFPKSVCTSVNECICH 65 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~----~~------------~~~~~~~~~~~v~~g~~~~~~h 65 (235)
+++.+++.++++++++.++||++-.||...+.+.+.+.+. .+ .......+...+.....+ .+.
T Consensus 106 ~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e-~p~ 184 (243)
T cd01087 106 RELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHD-VGG 184 (243)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCccccc-Ccc
Confidence 5677888899999999999999999999999888876532 11 000001122222222222 222
Q ss_pred C--CC-CCcCCCCCCeEEEEEeeeeCC-----------EEeeeEEEEEecC
Q 026636 66 G--IP-DSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCGD 102 (235)
Q Consensus 66 ~--~~-~~~~l~~Gd~v~id~~~~~~G-----------y~~d~~Rt~~~G~ 102 (235)
. .+ ++.+|++|.++.++.+....+ +..-+..|++|.+
T Consensus 185 ~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 185 YLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 2 22 468999999999999887553 7778889999843
No 64
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.66 E-value=0.013 Score=48.20 Aligned_cols=85 Identities=9% Similarity=0.128 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCc-eEeeccc--eeccccccccCCeEecccCCCCCcccCC
Q 026636 106 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFV--GHGIGRVFHADPVVLHYRNNDHGRMVLN 182 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~-~~~~~~~--GHgiG~~~~e~p~~~~~~~~~~~~l~~g 182 (235)
.+|++-+.+++.++++...+|||+|..||++++.+..-+.|. +..-++. --++-.++.|----.. .+.++|+.|
T Consensus 124 ~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGI---PD~RpLedG 200 (369)
T KOG2738|consen 124 GMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGI---PDSRPLEDG 200 (369)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCC---CCcCcCCCC
Confidence 356666677888899999999999999999999998777653 3111111 1112222222111111 267899999
Q ss_pred cEEEEeeEEEc
Q 026636 183 QTFTIEPMLTI 193 (235)
Q Consensus 183 mv~~iep~~~~ 193 (235)
..+.|+..+|.
T Consensus 201 DIvNiDVtvY~ 211 (369)
T KOG2738|consen 201 DIVNIDVTVYL 211 (369)
T ss_pred CEEeEEEEEEe
Confidence 99999999997
No 65
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=96.37 E-value=0.041 Score=47.91 Aligned_cols=98 Identities=24% Similarity=0.235 Sum_probs=71.9
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeee--ecCCCccc-cCCC-CCcCCCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECIC-HGIP-DSRALEDGD 77 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~--~g~~~~~~-h~~~-~~~~l~~Gd 77 (235)
|+.-.++.++.++++++++||++-.|+....++.+.+.|....+. .++...+. ....+ .+ ...+ ++.+|++|-
T Consensus 265 ~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHgvG~~l~vhE-~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 265 REIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHGVGFVLDVHE-HPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCccccCCCCcccCc-CccccCCCCCccccCCc
Confidence 567788999999999999999999999999999999976533222 12222222 11111 12 1122 578999999
Q ss_pred eEEEEEeee-eCCEEeeeEEEEEecC
Q 026636 78 TINIDVTVY-LNGYHGDTSATFFCGD 102 (235)
Q Consensus 78 ~v~id~~~~-~~Gy~~d~~Rt~~~G~ 102 (235)
++.++.+.. .+.+-.-+..+++|.+
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEEcC
Confidence 999999975 5669999999999965
No 66
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=95.87 E-value=0.1 Score=46.34 Aligned_cols=98 Identities=14% Similarity=0.156 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhc----CCceEeeccceeccccccccCCeEecccCCCCCcccCC
Q 026636 107 ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR----YNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLN 182 (235)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~----~G~~~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~g 182 (235)
++++-+.+..+++.+.+.++||++..||...++..+++ .|......| .-++++. +..+...+. .+++.+|++|
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aF-Pt~vS~N-~~aaH~tP~-~gd~~vLk~G 237 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAF-PTGCSLN-HCAAHYTPN-TGDKTVLTYD 237 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCC-CceeecC-ccccCCCCC-CCCCcEecCC
Confidence 45666666777777888899999999999977775544 343210111 0122221 111211110 1246799999
Q ss_pred cEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEc
Q 026636 183 QTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILIT 225 (235)
Q Consensus 183 mv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt 225 (235)
.++.|+.+... .++-+-+..|+.+.
T Consensus 238 DvVkID~G~~v------------------dGYiaD~ArTv~vg 262 (470)
T PTZ00053 238 DVCKLDFGTHV------------------NGRIIDCAFTVAFN 262 (470)
T ss_pred CeEEEEEeEEE------------------CCEEEeEEEEEEeC
Confidence 99999999876 34566677788774
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=95.25 E-value=0.33 Score=43.09 Aligned_cols=100 Identities=18% Similarity=0.263 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHH----HCCCccC----------CCCC--CCCCCeeeecCCCcccc
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPS----------PLGY--GGFPKSVCTSVNECICH 65 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~----~~g~~~~----------~~~~--~~~~~~v~~g~~~~~~h 65 (235)
|++-+++.++.+++++.++||++-.+|...+.+.+. +.|..+. ...+ .+....+....++ .++
T Consensus 285 ~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd-~~~ 363 (438)
T PRK10879 285 REIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHD-VGV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCc-CCC
Confidence 567788889999999999999999999887765443 3343110 0001 1111112211221 122
Q ss_pred CCC-CCcCCCCCCeEEEEEeeee----------CCEEeeeEEEEEecC
Q 026636 66 GIP-DSRALEDGDTINIDVTVYL----------NGYHGDTSATFFCGD 102 (235)
Q Consensus 66 ~~~-~~~~l~~Gd~v~id~~~~~----------~Gy~~d~~Rt~~~G~ 102 (235)
+.+ .+++|++|.++.|+-+..+ .|+..-+.-+++|.+
T Consensus 364 ~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~ 411 (438)
T PRK10879 364 YGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITE 411 (438)
T ss_pred cCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECC
Confidence 222 4689999999999998764 256788899999954
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=94.39 E-value=1.1 Score=36.05 Aligned_cols=96 Identities=15% Similarity=0.062 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHHhhhC-CCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeee--ecCCCc--cccCCCCCcCCCCC
Q 026636 2 RVSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNEC--ICHGIPDSRALEDG 76 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~-~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~--~g~~~~--~~h~~~~~~~l~~G 76 (235)
|++..++.++..++.+.+ +||.+-.+|.+.+++.+.+.|.+.... ....+. ....+. .++....+++|++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~h~----~GHgIG~~l~~hE~P~i~~~~~~~~~L~~G 189 (224)
T cd01085 114 KRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYGHG----TGHGVGSFLNVHEGPQSISPAPNNVPLKAG 189 (224)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCCCC----CCCCCCCCCcCCCCCCcCCcCCCCCCcCCC
Confidence 445556666667777766 599999999999999998888642111 111222 111211 11011245799999
Q ss_pred CeEEEEEeeee-CCEEeeeEEEEEec
Q 026636 77 DTINIDVTVYL-NGYHGDTSATFFCG 101 (235)
Q Consensus 77 d~v~id~~~~~-~Gy~~d~~Rt~~~G 101 (235)
.++.|+-+... +....-+..++++.
T Consensus 190 mvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 190 MILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 99999999875 45678899999884
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=92.87 E-value=1.4 Score=39.17 Aligned_cols=87 Identities=16% Similarity=0.182 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHH----HHCCCccC---------CC--CC--CCCCCeeeecCCCccc-
Q 026636 3 VSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS---------PL--GY--GGFPKSVCTSVNECIC- 64 (235)
Q Consensus 3 ~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~----~~~g~~~~---------~~--~~--~~~~~~v~~g~~~~~~- 64 (235)
+.-+++.++.+++++.++||++-.||.....+.+ .+.|.... .. .+ .+....+.....+.-.
T Consensus 272 ~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~ 351 (443)
T PRK13607 272 ALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGF 351 (443)
T ss_pred HHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCc
Confidence 4567788899999999999999999988776544 44554321 00 00 1122222222222100
Q ss_pred ---------------cCCCCCcCCCCCCeEEEEEeeeeCC
Q 026636 65 ---------------HGIPDSRALEDGDTINIDVTVYLNG 89 (235)
Q Consensus 65 ---------------h~~~~~~~l~~Gd~v~id~~~~~~G 89 (235)
.+...+++|++|.+++|+-|..+.+
T Consensus 352 ~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 352 MQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred ccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 0112458999999999999987654
No 70
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=91.94 E-value=1.5 Score=36.54 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHH----hhhcCCceEeeccceeccccccccC-CeEecccCCCCCcc
Q 026636 105 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD----HADRYNYGVVRQFVGHGIGRVFHAD-PVVLHYRNNDHGRM 179 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~----~~~~~G~~~~~~~~GHgiG~~~~e~-p~~~~~~~~~~~~l 179 (235)
.+.|++.++=+++..++.+.+|||+++-||.+.++. .+.+.|.. .-.|...|.+..-. -...+ -+++..+|
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~cAAHyTp-NaGd~tVL 161 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHCAAHYTP-NAGDKTVL 161 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccchhhhcCC-CCCCceee
Confidence 355677777788888888999999999999887655 45555654 22344444432111 11111 12467899
Q ss_pred cCCcEEEEeeEEEc
Q 026636 180 VLNQTFTIEPMLTI 193 (235)
Q Consensus 180 ~~gmv~~iep~~~~ 193 (235)
+...|.-|+-+...
T Consensus 162 qydDV~KiDfGthi 175 (397)
T KOG2775|consen 162 KYDDVMKIDFGTHI 175 (397)
T ss_pred eecceEEEeccccc
Confidence 99999999877664
No 71
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=90.65 E-value=1.4 Score=37.59 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcC-------------CceE-----eeccceeccccccccCCe
Q 026636 106 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY-------------NYGV-----VRQFVGHGIGRVFHADPV 167 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~-------------G~~~-----~~~~~GHgiG~~~~e~p~ 167 (235)
..+.+-+.+..++..+++.++||++..||.......+.+. |... ..+..+| -.|.
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~h-------~sPl 95 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVCH-------FSPL 95 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceeec-------cCcC
Confidence 3556667788888999999999999999977765554331 2110 0111222 2233
Q ss_pred EecccCCCCCcccCCcEEEEeeEEEcCCCCeeecCCCceEEecCCCeeEEEEEEEEEcCCc
Q 026636 168 VLHYRNNDHGRMVLNQTFTIEPMLTIGSINPVMWDDNWTIVTEDGSLSAQFEHTILITRDG 228 (235)
Q Consensus 168 ~~~~~~~~~~~l~~gmv~~iep~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~vt~~g 228 (235)
.+ +.+.+|++|.++-|.-++.. .++.+-+.+|++|++.-
T Consensus 96 ks----d~~~~Lk~GDvVKIdLG~Hi------------------DGfiA~vaHT~VV~~~~ 134 (398)
T KOG2776|consen 96 KS----DADYTLKEGDVVKIDLGVHI------------------DGFIALVAHTIVVGPAP 134 (398)
T ss_pred CC----CCcccccCCCEEEEEeeeee------------------ccceeeeeeeEEeccCC
Confidence 32 35889999999999999987 35678899999998754
No 72
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=85.84 E-value=6.7 Score=30.35 Aligned_cols=75 Identities=12% Similarity=0.216 Sum_probs=56.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEeeccceeccccccccCCeEecccCCCCCcccCC
Q 026636 103 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLN 182 (235)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~l~~g 182 (235)
+.++++...+.+.+-+.++++..-|..+..+-.+.+++.+.+..- .++.-|-+|-- -++.. ++. +.|
T Consensus 113 ~~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk~---~~yy~q~~GAi----RYVva---d~g---ekg 179 (200)
T PF07305_consen 113 QGPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGKG---SRYYSQTEGAI----RYVVA---DNG---EKG 179 (200)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCCC---CcceeeccCce----EEEEe---cCC---Cce
Confidence 347888888999999999999999999999999999999888432 44566766642 11211 122 789
Q ss_pred cEEEEeeE
Q 026636 183 QTFTIEPM 190 (235)
Q Consensus 183 mv~~iep~ 190 (235)
++|+|||.
T Consensus 180 lTFAVEPI 187 (200)
T PF07305_consen 180 LTFAVEPI 187 (200)
T ss_pred eEEEeeee
Confidence 99999995
No 73
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=84.54 E-value=4 Score=26.72 Aligned_cols=52 Identities=17% Similarity=0.309 Sum_probs=34.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCC-ccccCCCCCcCCCCCCeEEE
Q 026636 19 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 81 (235)
Q Consensus 19 ~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~-~~~h~~~~~~~l~~Gd~v~i 81 (235)
++.|.|-.|++..++..+.+.=.. .+..|.+. ..+...+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~-----------A~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKY-----------ALVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCe-----------eEEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 567999999999998776554111 11123222 12334567889999999987
No 74
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=82.11 E-value=5.6 Score=37.40 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccC--CCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEE
Q 026636 3 VSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS--PLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTIN 80 (235)
Q Consensus 3 ~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~--~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~ 80 (235)
++-...-.+.++++..+|||..-.+|...+...+.+.+-+-. +..-.+|...+-+-.++... ..-.+++|++|.++.
T Consensus 261 ~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~i-naKnd~~lk~gmvFn 339 (960)
T KOG1189|consen 261 ENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVI-NAKNDRVLKKGMVFN 339 (960)
T ss_pred HHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeecccccc-cccchhhhccCcEEE
Confidence 344455677788999999999999999999999998875321 11001222111111222211 223679999999999
Q ss_pred EEEeee-------eCCEEeeeEEEEEecC
Q 026636 81 IDVTVY-------LNGYHGDTSATFFCGD 102 (235)
Q Consensus 81 id~~~~-------~~Gy~~d~~Rt~~~G~ 102 (235)
|.+|.. -+-|.--++-|+.+|+
T Consensus 340 i~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 340 ISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred EeeccccccCcccccchhhhccceeeecC
Confidence 999864 2347777999999986
No 75
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=70.41 E-value=9.9 Score=25.48 Aligned_cols=51 Identities=29% Similarity=0.275 Sum_probs=36.8
Q ss_pred CcCCCCCCeEEEEEeeee-CCEEeeeE------EEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCC
Q 026636 70 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 129 (235)
Q Consensus 70 ~~~l~~Gd~v~id~~~~~-~Gy~~d~~------Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~ 129 (235)
++..+.||.|.+++.+.. +|-..|-+ .++.+|+. ....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 456889999999999986 88777777 67777751 12335666677777774
No 76
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=64.50 E-value=24 Score=32.73 Aligned_cols=72 Identities=22% Similarity=0.284 Sum_probs=49.0
Q ss_pred HHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeee--cC--CC-ccccCCCCCcCCCCCCeEEEEE
Q 026636 9 AQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT--SV--NE-CICHGIPDSRALEDGDTINIDV 83 (235)
Q Consensus 9 ~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~--g~--~~-~~~h~~~~~~~l~~Gd~v~id~ 83 (235)
....+.+...+|||.+--+|...+..++.+.|-+-. +.|...+.+ |. ++ ..+...-++|+||.|+++.|.+
T Consensus 308 ~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~----pnF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fnis~ 383 (1001)
T COG5406 308 YMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELG----PNFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNISL 383 (1001)
T ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccC----chHhhhhhhhccccccccccceeccCCceeccccEEEEee
Confidence 344566777899999999999999999999886532 223223322 21 21 1223334679999999999988
Q ss_pred e
Q 026636 84 T 84 (235)
Q Consensus 84 ~ 84 (235)
|
T Consensus 384 g 384 (1001)
T COG5406 384 G 384 (1001)
T ss_pred c
Confidence 5
No 77
>COG0414 PanC Panthothenate synthetase [Coenzyme metabolism]
Probab=54.45 E-value=30 Score=28.63 Aligned_cols=56 Identities=18% Similarity=0.218 Sum_probs=47.4
Q ss_pred CCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCch-hhHHHHHHHhhhcCCc
Q 026636 88 NGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY-KKIGKTIQDHADRYNY 147 (235)
Q Consensus 88 ~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~-~ev~~~~~~~~~~~G~ 147 (235)
+|. +-.+|+.++ ++++|+..-.+.+++.++.+.+.-|... .++-+++.+.+.+.++
T Consensus 182 DGL-A~SSRN~YL---s~eeR~~A~~L~~~L~~~~~~~~~G~~~~~~i~~~~~~~L~~~~~ 238 (285)
T COG0414 182 DGL-ALSSRNVYL---SAEERKAAPALYRALTAAAELAAGGERDPAKIIEAARQVLEEAGF 238 (285)
T ss_pred Ccc-chhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhcCC
Confidence 443 446788888 8999999999999999999999999876 8899999999987676
No 78
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=53.14 E-value=27 Score=22.82 Aligned_cols=47 Identities=15% Similarity=0.110 Sum_probs=31.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEEE
Q 026636 19 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 81 (235)
Q Consensus 19 ~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~i 81 (235)
++.|.|-.|++..++..+.+.=.+. .+ .+ +.....+..+++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~A----------~v-~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIEA----------VG-GR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEEE----------EE-cc-----CEEECCCEEecCCCEEEE
Confidence 5679999999999987665442211 11 22 222345788999999987
No 79
>PRK01490 tig trigger factor; Provisional
Probab=47.60 E-value=85 Score=27.78 Aligned_cols=57 Identities=19% Similarity=0.382 Sum_probs=37.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEEEEEeeeeCCEEeee----EEE
Q 026636 22 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SAT 97 (235)
Q Consensus 22 G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~id~~~~~~Gy~~d~----~Rt 97 (235)
-+|+.+|...+.+...+++-. .+.++.++.||.|.+|+....+|-..+- ..+
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~------------------------~~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~ 186 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATL------------------------VPVERPAENGDRVTIDFVGSIDGEEFEGGKAEDFS 186 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCcc------------------------ccccccCCCCCEEEEEEEEEECCEECcCCCCCceE
Confidence 468888888887766555432 1233568999999999998877744332 245
Q ss_pred EEecC
Q 026636 98 FFCGD 102 (235)
Q Consensus 98 ~~~G~ 102 (235)
+.+|.
T Consensus 187 ~~lg~ 191 (435)
T PRK01490 187 LELGS 191 (435)
T ss_pred EEEcC
Confidence 55554
No 80
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=47.32 E-value=64 Score=22.28 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=48.7
Q ss_pred eEEEEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCC-------CchhhHHHHHHHhhhcCCc
Q 026636 78 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPG-------MEYKKIGKTIQDHADRYNY 147 (235)
Q Consensus 78 ~v~id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG-------~~~~ev~~~~~~~~~~~G~ 147 (235)
....|+......|- .+++.+-+-. ..+.++..+.+.+.....+..+.-| ++-.+..+.+.+.+++.||
T Consensus 22 g~V~DV~veHp~YG-~i~~~L~i~s-r~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~ 96 (98)
T PF02829_consen 22 GRVLDVIVEHPVYG-EITGNLNISS-RRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGF 96 (98)
T ss_dssp -EEEEEEEEETTTE-EEEEEEEE-S-HHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-
T ss_pred CEEEEEEEeCCCCc-EEEEEEecCC-HHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCC
Confidence 34558888888888 9999999944 5667777777777777777777777 4667788899999999987
No 81
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=46.99 E-value=29 Score=18.92 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHH
Q 026636 4 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 37 (235)
Q Consensus 4 A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~ 37 (235)
.+.+...++..+.+.++...|+.+|...+.....
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 3567788888999999999999999999988664
No 82
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=44.15 E-value=17 Score=23.09 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=15.3
Q ss_pred HHhhhCCCCCCHHHHHHHH
Q 026636 14 YAGTLVKPGITTDEIDKAV 32 (235)
Q Consensus 14 ~~~~~~~~G~te~el~~~~ 32 (235)
+.++.|++|||..|+.+.+
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 4567899999999999876
No 83
>PF11020 DUF2610: Domain of unknown function (DUF2610); InterPro: IPR021277 This family is conserved in Proteobacteria. One member is annotated as being elongation factor P but this could not be confirmed.
Probab=41.69 E-value=52 Score=21.73 Aligned_cols=61 Identities=13% Similarity=0.153 Sum_probs=37.5
Q ss_pred EEEeeeeCCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHh---hhcCCce
Q 026636 81 IDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH---ADRYNYG 148 (235)
Q Consensus 81 id~~~~~~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~---~~~~G~~ 148 (235)
+.+-+.++|=.+-++ +++|+|.+..-.+ .-+..-+..-|=|.-..+|.++..+. .++.|..
T Consensus 4 F~i~C~Fggq~a~F~--iYIG~P~~~~HPl-----~~Q~~WLskeRgG~IP~~V~~sl~kL~~La~~N~v~ 67 (82)
T PF11020_consen 4 FVIPCDFGGQRAPFA--IYIGEPKPDHHPL-----QFQATWLSKERGGQIPEKVMDSLSKLYKLAKENNVS 67 (82)
T ss_pred eEeCCccCCccCcee--EEeCCCCCCCCch-----HHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHHcCCC
Confidence 345556666666655 8999987765444 34455666677777667776665444 3444443
No 84
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=40.99 E-value=82 Score=27.04 Aligned_cols=52 Identities=19% Similarity=0.311 Sum_probs=35.5
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCc-cccCCCCCcCCCCCCeEEE
Q 026636 19 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC-ICHGIPDSRALEDGDTINI 81 (235)
Q Consensus 19 ~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~-~~h~~~~~~~l~~Gd~v~i 81 (235)
++.|-|-.|+|+.+++-+.+. |..-...|.+.- .+...--+.+|+++|+|.|
T Consensus 310 lr~GsTV~Dvc~~IH~~l~~~-----------FryA~VWGkSvk~~~QrVG~dHvLeD~DIV~I 362 (365)
T COG1163 310 LRRGSTVGDVCRKIHRDLVEN-----------FRYARVWGKSVKHPGQRVGLDHVLEDEDIVEI 362 (365)
T ss_pred EeCCCcHHHHHHHHHHHHHHh-----------cceEEEeccCCCCCccccCcCcCccCCCeEEE
Confidence 567889999999999999876 322333454321 1222345789999999987
No 85
>PLN02660 pantoate--beta-alanine ligase
Probab=39.80 E-value=80 Score=26.43 Aligned_cols=57 Identities=12% Similarity=0.137 Sum_probs=44.7
Q ss_pred CCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCC-chhhHHHHHHHhhhcCCce
Q 026636 88 NGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM-EYKKIGKTIQDHADRYNYG 148 (235)
Q Consensus 88 ~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~-~~~ev~~~~~~~~~~~G~~ 148 (235)
+|. +-.+|+.++ ++++|+......+++..+.+.++.|. ...++-+.+.+.+++.|+.
T Consensus 186 dGL-A~SSRN~yL---s~~eR~~A~~l~~~L~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 243 (284)
T PLN02660 186 DGL-AMSSRNVRL---SAEEREKALSISRSLARAEELVEEGETDADELKEQVRQAIAEAGGE 243 (284)
T ss_pred CCC-eeccccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHhCCCC
Confidence 443 446788888 88999998888998888888888886 5577778888888887753
No 86
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=38.77 E-value=93 Score=20.27 Aligned_cols=48 Identities=23% Similarity=0.368 Sum_probs=31.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEEE
Q 026636 19 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 81 (235)
Q Consensus 19 ~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~i 81 (235)
++.|.|-.|++..++..+.+. |...+ +.. .+...+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai--~~k--~~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAI--DAR--TGRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeE--Eee--CCEEeCCCcEecCCCEEEE
Confidence 567999999999988766543 11001 111 1334466789999999987
No 87
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=38.09 E-value=1.4e+02 Score=26.20 Aligned_cols=57 Identities=23% Similarity=0.455 Sum_probs=38.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCC-CCcCCCCCCeEEEEEeeeeCCEEeeeE----E
Q 026636 22 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDTINIDVTVYLNGYHGDTS----A 96 (235)
Q Consensus 22 G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~-~~~~l~~Gd~v~id~~~~~~Gy~~d~~----R 96 (235)
-+|+.+|...+.....+++-.. + .++.++.||.|.+|+....+|-..+-+ .
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~ 174 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLV------------------------PVERRAAEKGDRVTIDFEGFIDGEAFEGGKAENF 174 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccccCCCCEEEEEEEEEECCEECcCCCCCCe
Confidence 4688888888887776665421 1 234689999999999887776544332 3
Q ss_pred EEEecC
Q 026636 97 TFFCGD 102 (235)
Q Consensus 97 t~~~G~ 102 (235)
++.+|.
T Consensus 175 ~~~lg~ 180 (408)
T TIGR00115 175 SLELGS 180 (408)
T ss_pred EEEECC
Confidence 555654
No 88
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=36.95 E-value=49 Score=24.01 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCC
Q 026636 5 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 41 (235)
Q Consensus 5 ~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~ 41 (235)
+.++.+....+.+.+..|.|+.||...+ ..+.|-
T Consensus 56 a~iA~dmR~~Vr~~i~~G~Sd~eI~~~~---v~RYG~ 89 (126)
T TIGR03147 56 SPIAYDLRHEVYSMVNEGKSNQQIIDFM---TARFGD 89 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHH---HHhcCC
Confidence 4678888899999999999999887665 445564
No 89
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=36.68 E-value=76 Score=20.33 Aligned_cols=42 Identities=12% Similarity=0.323 Sum_probs=30.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhc
Q 026636 103 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 144 (235)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~ 144 (235)
.+.+++.+.+.+.+..+.++..++.|.+..=+....+.+++.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 478899999999999999999999987655444445544443
No 90
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=35.16 E-value=33 Score=22.75 Aligned_cols=33 Identities=18% Similarity=0.334 Sum_probs=23.5
Q ss_pred HHHHHHHhhhCCC----CCCHHHHHHHHHHHHHHCCC
Q 026636 9 AQVLEYAGTLVKP----GITTDEIDKAVHQMIIDNGA 41 (235)
Q Consensus 9 ~~~~~~~~~~~~~----G~te~el~~~~~~~~~~~g~ 41 (235)
+.....+...+.. ++|..||...+...+.+.+.
T Consensus 38 ~~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 38 EEIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 3344444444544 99999999999999997764
No 91
>TIGR00018 panC pantoate--beta-alanine ligase. This family is pantoate--beta-alanine ligase, the last enzyme of pantothenate biosynthesis.
Probab=33.43 E-value=1.1e+02 Score=25.57 Aligned_cols=57 Identities=14% Similarity=0.188 Sum_probs=44.4
Q ss_pred CCEEeeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCC-chhhHHHHHHHhhhcCCce
Q 026636 88 NGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM-EYKKIGKTIQDHADRYNYG 148 (235)
Q Consensus 88 ~Gy~~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~-~~~ev~~~~~~~~~~~G~~ 148 (235)
+|. +-.+|+.++ ++++|+......+++..+.+.++.|. ...++-+.+.+.+++.|+.
T Consensus 183 dGL-A~SSRN~~L---s~~eR~~A~~l~~~L~~a~~~~~~g~~~~~~i~~~~~~~l~~~~~~ 240 (282)
T TIGR00018 183 DGL-ALSSRNVYL---TAEQRKIAPGLYRALQAIAQAIQAGERDLDAVITIAGDILDTKSFR 240 (282)
T ss_pred CCC-chhhccccC---CHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC
Confidence 444 446788888 88999988888888888888888886 4567777788888887763
No 92
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=33.36 E-value=1.3e+02 Score=23.19 Aligned_cols=52 Identities=15% Similarity=0.183 Sum_probs=35.6
Q ss_pred CcCCCCCCeEEEEEeee-eCCEEeeeEE-----EEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCc
Q 026636 70 SRALEDGDTINIDVTVY-LNGYHGDTSA-----TFFCGDVDDEARNLVKVTKDCLHKAISVCAPGME 130 (235)
Q Consensus 70 ~~~l~~Gd~v~id~~~~-~~Gy~~d~~R-----t~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~ 130 (235)
....++||.|.+++-.. .+|-..|-++ +|.+|. ..+..+++.++..+++|-+
T Consensus 83 g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~---------~~vi~Gl~e~L~~Mk~Ge~ 140 (177)
T TIGR03516 83 GTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQ---------QDLFSGLRDGLKLMKEGET 140 (177)
T ss_pred CCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCC---------cchhHHHHHHHcCCCCCCE
Confidence 35568999999998775 6676655553 566664 2345667777778888864
No 93
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=32.36 E-value=3.3e+02 Score=24.25 Aligned_cols=97 Identities=20% Similarity=0.203 Sum_probs=59.0
Q ss_pred HHHHHHHHHHhhhCCC--CCCHHHHHH----HHHHHHHHCCCccCCCC-----CCCCCCeee--ecCCCccccCC---CC
Q 026636 6 RLAAQVLEYAGTLVKP--GITTDEIDK----AVHQMIIDNGAYPSPLG-----YGGFPKSVC--TSVNECICHGI---PD 69 (235)
Q Consensus 6 ~i~~~~~~~~~~~~~~--G~te~el~~----~~~~~~~~~g~~~~~~~-----~~~~~~~v~--~g~~~~~~h~~---~~ 69 (235)
++.-++.+..++.+++ |.|..+|-. .+.+.+.+.|....... ..-+|+.|+ .|.+ .|-. +.
T Consensus 344 eavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmD---VHD~p~v~r 420 (488)
T KOG2414|consen 344 EAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMD---VHDCPTVSR 420 (488)
T ss_pred HHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCcc---cccCCCCCC
Confidence 4445566677788888 999988875 45666777776432110 001222221 1211 2323 46
Q ss_pred CcCCCCCCeEEEEEeee----------eCCEEeeeEEEEEecCCCH
Q 026636 70 SRALEDGDTINIDVTVY----------LNGYHGDTSATFFCGDVDD 105 (235)
Q Consensus 70 ~~~l~~Gd~v~id~~~~----------~~Gy~~d~~Rt~~~G~~~~ 105 (235)
+.+|++|-+++|+-|.. +.|--..|.--+++|+-.+
T Consensus 421 ~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGIGiRIEDDV~i~edg~ 466 (488)
T KOG2414|consen 421 DIPLQPGMVITIEPGVYIPEDDDPPEEFRGIGIRIEDDVAIGEDGP 466 (488)
T ss_pred CccCCCCceEEecCceecCccCCCchHhcCceEEeecceEeccCCc
Confidence 89999999999987753 3566677777777776333
No 94
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=32.26 E-value=1.5e+02 Score=22.27 Aligned_cols=39 Identities=8% Similarity=0.035 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCcc
Q 026636 5 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYP 43 (235)
Q Consensus 5 ~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~ 43 (235)
..+++.+...+.......++-.||...+.+.|.+.|-+.
T Consensus 85 ~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~a 123 (154)
T PRK00464 85 EAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEVA 123 (154)
T ss_pred HHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 345555656665555568999999999999999998653
No 95
>PRK10144 formate-dependent nitrite reductase complex subunit NrfF; Provisional
Probab=31.76 E-value=67 Score=23.33 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCC
Q 026636 5 GRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 41 (235)
Q Consensus 5 ~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~ 41 (235)
+.++.+....+.+.+..|.|+.||...+ ..+.|-
T Consensus 56 a~iA~dmR~~Vr~~i~~G~sd~eI~~~~---v~RYG~ 89 (126)
T PRK10144 56 APVAVSMRHQVYSMVAEGKSEVEIIGWM---TERYGD 89 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHH---HHhcCC
Confidence 4678888889999999999999887665 445564
No 96
>PF11399 DUF3192: Protein of unknown function (DUF3192); InterPro: IPR021534 Some members in this family of proteins are annotated as lipoproteins however this cannot be confirmed.
Probab=31.10 E-value=1.1e+02 Score=21.30 Aligned_cols=41 Identities=12% Similarity=0.049 Sum_probs=30.9
Q ss_pred EEEecCCCHHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHH
Q 026636 97 TFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 138 (235)
Q Consensus 97 t~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~ 138 (235)
.+.++++.++... |+.-..-....+..|++|++..+|-..+
T Consensus 4 Vi~~~~~~~~~~~-W~drq~~Nr~~i~~L~lg~s~~~V~~~l 44 (102)
T PF11399_consen 4 VINVYDDDPDWMD-WEDRQAYNRQNIAKLSLGMSKDQVIALL 44 (102)
T ss_pred EEEEcCCCcccCC-HHHHHHHHHHHHHhcCCCCCHHHHHHHh
Confidence 4556665555544 8888888888999999999988877653
No 97
>PRK09812 toxin ChpB; Provisional
Probab=27.99 E-value=42 Score=23.84 Aligned_cols=30 Identities=10% Similarity=0.108 Sum_probs=21.8
Q ss_pred cCCCCCCeEEEEEeeeeCCEEeeeEEEEEe
Q 026636 71 RALEDGDTINIDVTVYLNGYHGDTSATFFC 100 (235)
Q Consensus 71 ~~l~~Gd~v~id~~~~~~Gy~~d~~Rt~~~ 100 (235)
.+++.||++++|+.+..+.-...-.|.+++
T Consensus 5 ~~~~rGdI~~v~l~P~~G~E~~gk~RP~vV 34 (116)
T PRK09812 5 SKFERGDIVLVGFDPASGHEQQGAGRPALV 34 (116)
T ss_pred ccCCCCcEEEEECCCCCccccCCCcCeEEE
Confidence 457889999999988764443344677777
No 98
>KOG2611 consensus Neurochondrin/leucine-rich protein (Neurochondrin) [Function unknown]
Probab=27.82 E-value=16 Score=32.88 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=46.1
Q ss_pred CCeEEEEEeeeeCCEEeeeEEEEEecC--------CCHHHHHH--HHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhc
Q 026636 76 GDTINIDVTVYLNGYHGDTSATFFCGD--------VDDEARNL--VKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 144 (235)
Q Consensus 76 Gd~v~id~~~~~~Gy~~d~~Rt~~~G~--------~~~~~~~~--~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~ 144 (235)
+|.-.+-+++.|.|||+|.+--|++|- .-|..... -....+..-..+..++||.--.++-.+.+.++.+
T Consensus 584 nD~taLvvS~aYkG~WsDLsELWFLGMQt~~G~lPLvPWLs~~AL~S~W~e~ivk~L~kVk~~tl~~nv~sAYe~~L~q 662 (698)
T KOG2611|consen 584 NDPTALVVSIAYKGYWSDLSELWFLGMQTMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQ 662 (698)
T ss_pred CCCceEEeehhhhhhhhhHHHHHHHhHHHHcCcccchhhhcHHHHhcccHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 677777788999999999999888862 11222211 1122344445667889998888887777766544
No 99
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=26.90 E-value=1.1e+02 Score=20.56 Aligned_cols=27 Identities=19% Similarity=0.444 Sum_probs=21.9
Q ss_pred HHHHHhhhCCCCCCHHHHHHHHHHHHH
Q 026636 11 VLEYAGTLVKPGITTDEIDKAVHQMII 37 (235)
Q Consensus 11 ~~~~~~~~~~~G~te~el~~~~~~~~~ 37 (235)
.+..+.+-++|+||-.||.+.+...-.
T Consensus 37 LLdNL~~YI~~~Ms~edi~~II~nMr~ 63 (95)
T PF04363_consen 37 LLDNLSDYIKPDMSIEDIRAIIENMRS 63 (95)
T ss_pred HHHHHHHHccCCCCHHHHHHHHHHHHh
Confidence 367788899999999999988865543
No 100
>PF09958 DUF2192: Uncharacterized protein conserved in archaea (DUF2192); InterPro: IPR018693 This family of various hypothetical archaeal proteins has no known function.
Probab=26.45 E-value=1.6e+02 Score=23.80 Aligned_cols=44 Identities=7% Similarity=0.126 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhhhcCCceEe
Q 026636 105 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV 150 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~kpG~~~~ev~~~~~~~~~~~G~~~~ 150 (235)
+-+++..+++.+.+..+++. -..+=.++-...++.+++.|..|+
T Consensus 4 ~l~r~RI~va~~l~~~il~~--~~~~R~~lv~~L~~~Y~~~gIeP~ 47 (231)
T PF09958_consen 4 ELYRKRIEVATDLWSRILRG--EVLDREELVELLREVYEENGIEPF 47 (231)
T ss_pred HHHHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHcCCCcC
Confidence 34677788888888888887 677889999999999999998764
No 101
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=25.43 E-value=35 Score=22.47 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=26.6
Q ss_pred chhhHHHHHHHhhhcCCceEeeccceeccccccccCCeEec
Q 026636 130 EYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLH 170 (235)
Q Consensus 130 ~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~~~~e~p~~~~ 170 (235)
...++...+-+++++.||.+.....|+-+- .++.+|..
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnPinQivGYllS---GDPaYIts 53 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNPINQIVGYLLS---GDPAYITS 53 (79)
T ss_pred hHHHHHHHHHHHHHHcCCChHHHHHhheec---CCCccccC
Confidence 456677777788899999988777777655 34444544
No 102
>PF02824 TGS: TGS domain; InterPro: IPR004095 The TGS domain is present in a number of enzymes, for example, in threonyl-tRNA synthetase (ThrRS), GTPase, and guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (SpoT) []. The TGS domain is also present at the amino terminus of the uridine kinase from the spirochaete Treponema pallidum (but not any other organism, including the related spirochaete Borrelia burgdorferi). TGS is a small domain that consists of ~50 amino acid residues and is predicted to possess a predominantly beta-sheet structure. There is no direct information on the functions of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role []. ; PDB: 1WXQ_A 1NYR_B 1NYQ_B 2KMM_A 1WWT_A 1TKE_A 1TKG_A 1TJE_A 1QF6_A 1TKY_A ....
Probab=25.05 E-value=65 Score=19.75 Aligned_cols=46 Identities=24% Similarity=0.385 Sum_probs=30.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCccccCCCCCcCCCCCCeEEE
Q 026636 19 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 81 (235)
Q Consensus 19 ~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~~~h~~~~~~~l~~Gd~v~i 81 (235)
+..|.|-.|++..+...+.+.-.. .-.|. ....-+++|++||.|.|
T Consensus 13 ~~~g~T~~d~A~~I~~~l~~~~~~--------------A~Vng---~~vdl~~~L~~~d~v~i 58 (60)
T PF02824_consen 13 LPEGSTVLDVAYSIHSSLAKRAVA--------------AKVNG---QLVDLDHPLEDGDVVEI 58 (60)
T ss_dssp EETTBBHHHHHHHHSHHHHHCEEE--------------EEETT---EEEETTSBB-SSEEEEE
T ss_pred CCCCCCHHHHHHHHCHHHHhheeE--------------EEEcC---EECCCCCCcCCCCEEEE
Confidence 567899999999999888775211 11111 12245678999998876
No 103
>cd00560 PanC Pantoate-beta-alanine ligase. PanC Pantoate-beta-alanine ligase, also known as pantothenate synthase, catalyzes the formation of pantothenate from pantoate and alanine. PanC belongs to a large superfamily of nucleotidyltransferases that includes , ATP sulfurylase (ATPS), phosphopantetheine adenylyltransferase (PPAT), and the amino-acyl tRNA synthetases. The enzymes of this family are structurally similar and share a dinucleotide-binding domain.
Probab=24.87 E-value=1.5e+02 Score=24.78 Aligned_cols=54 Identities=17% Similarity=0.163 Sum_probs=42.3
Q ss_pred eeeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCC-chhhHHHHHHHhhhcCCce
Q 026636 92 GDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM-EYKKIGKTIQDHADRYNYG 148 (235)
Q Consensus 92 ~d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~-~~~ev~~~~~~~~~~~G~~ 148 (235)
.=.+|+.++ ++++++......+++..+.+.++-|. ...++-+.+++.+++.|+.
T Consensus 184 aiSSRN~~L---s~~~r~~A~~l~~~L~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~ 238 (277)
T cd00560 184 ALSSRNVYL---SAEERKEALALYRALKAAAEAIAAGERDAEDIIAAARDVLEAAGFR 238 (277)
T ss_pred eEeCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCC
Confidence 456677776 88999998888888888888887775 5677778888888887664
No 104
>PRK05423 hypothetical protein; Provisional
Probab=24.73 E-value=1.3e+02 Score=20.59 Aligned_cols=28 Identities=29% Similarity=0.567 Sum_probs=22.1
Q ss_pred HHHHHhhhCCCCCCHHHHHHHHHHHHHH
Q 026636 11 VLEYAGTLVKPGITTDEIDKAVHQMIID 38 (235)
Q Consensus 11 ~~~~~~~~~~~G~te~el~~~~~~~~~~ 38 (235)
.+..+.+-++|+||-.||.+.+...-..
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~D 71 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKSD 71 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhh
Confidence 4567788899999999999888665433
No 105
>COG4001 Predicted metal-binding protein [General function prediction only]
Probab=24.69 E-value=1.9e+02 Score=19.53 Aligned_cols=37 Identities=14% Similarity=0.323 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCC
Q 026636 3 VSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 41 (235)
Q Consensus 3 ~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~ 41 (235)
.++++..+++++... .-|+.|.+|.+.++..--+.|.
T Consensus 56 a~a~ivkkive~gar--AfgVdee~iRE~~~d~ywrrGl 92 (102)
T COG4001 56 ALASIVKKIVERGAR--AFGVDEEDIREQMHDQYWRRGL 92 (102)
T ss_pred HHHHHHHHHHHhcch--hcCCCHHHHHHHHHHHHHHHHH
Confidence 344444444443332 2589999999999888777765
No 106
>COG4387 Mu-like prophage protein gp36 [Function unknown]
Probab=24.30 E-value=8.5 Score=27.59 Aligned_cols=37 Identities=24% Similarity=0.223 Sum_probs=29.2
Q ss_pred eCCEEeeeEEEEEe-cCCCHHHHHHHHHHHHHHHHHHH
Q 026636 87 LNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAIS 123 (235)
Q Consensus 87 ~~Gy~~d~~Rt~~~-G~~~~~~~~~~~~~~~~~~~~~~ 123 (235)
.-.||+||+|-+.+ ++.+++.++.|+.....++.+.+
T Consensus 65 Lvr~CC~IA~Y~L~~~r~Tdq~r~rYe~av~~L~~va~ 102 (139)
T COG4387 65 LVRHCCDIARYRLCKNRATDQARQRYEDAVRFLEKVAS 102 (139)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHc
Confidence 44588999998888 67899999999988876665543
No 107
>PRK06646 DNA polymerase III subunit chi; Provisional
Probab=22.94 E-value=3.3e+02 Score=20.43 Aligned_cols=100 Identities=7% Similarity=-0.018 Sum_probs=47.8
Q ss_pred hHHHHHHHHHHHHHhhhCCCCCCHHHHHHHHHHHHHHCCCccCCCCCCCCCCeeeecCCCc--cccCC-CCCcCCCCCCe
Q 026636 2 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI-PDSRALEDGDT 78 (235)
Q Consensus 2 r~A~~i~~~~~~~~~~~~~~G~te~el~~~~~~~~~~~g~~~~~~~~~~~~~~v~~g~~~~--~~h~~-~~~~~l~~Gd~ 78 (235)
+.+++++++++.+-.+.+--.-++ +....+++.|=....+.. .|... .|.... .|=.. .+..... +.-
T Consensus 16 ~~acrL~~Ka~~~G~rv~I~~~d~-~~~~~LD~~LWtf~~~SF------lPH~~-~~~~~~a~~PV~L~~~~~~p~-~~~ 86 (154)
T PRK06646 16 KSILLLIEKCYYSDLKSVILTADA-DQQEMLNKNLWTYSRKQF------IPHGS-KLDPQPEKQPIYITDELQNPN-NAS 86 (154)
T ss_pred HHHHHHHHHHHHcCCEEEEEcCCH-HHHHHHHHHhcCCCCCCC------CCCCC-CCCCCCCCCCEEEecCCCCCC-CCC
Confidence 467888888888766554444444 345555555533322211 12121 121110 00000 0111122 444
Q ss_pred EEEEEee-------eeCCEEeeeEEEEEecCCCHHHHHH
Q 026636 79 INIDVTV-------YLNGYHGDTSATFFCGDVDDEARNL 110 (235)
Q Consensus 79 v~id~~~-------~~~Gy~~d~~Rt~~~G~~~~~~~~~ 110 (235)
|+|.+.. ..--+.+...|.+.+...++..+++
T Consensus 87 vLiNL~~~~~~~~~~~p~~f~~F~RVi~vv~d~e~~~~a 125 (154)
T PRK06646 87 VLVIISPTDIGKILQAKEYIRVFKRIIIITDLPEDLKEL 125 (154)
T ss_pred EEEECCCccccccccCchhhhccCEEEEEeCChHHHHHH
Confidence 5666666 3334567888998887644444333
No 108
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=22.80 E-value=2.2e+02 Score=22.52 Aligned_cols=23 Identities=30% Similarity=0.436 Sum_probs=17.0
Q ss_pred cccC--CCCCcCCCCCCeEEEEEee
Q 026636 63 ICHG--IPDSRALEDGDTINIDVTV 85 (235)
Q Consensus 63 ~~h~--~~~~~~l~~Gd~v~id~~~ 85 (235)
+.|+ +++|-.+..+++++||+|-
T Consensus 113 ivHGDLTtsNiIl~~~~i~~IDfGL 137 (204)
T COG3642 113 IVHGDLTTSNIILSGGRIYFIDFGL 137 (204)
T ss_pred eecCCCccceEEEeCCcEEEEECCc
Confidence 3464 3567778878899999985
No 109
>KOG3042 consensus Panthothenate synthetase [Coenzyme transport and metabolism]
Probab=22.58 E-value=1.9e+02 Score=23.20 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=42.3
Q ss_pred eeEEEEEecCCCHHHHHHHHHHHHHHHHHHHhccCCC-chhhHHHHHHHhhhcCCce
Q 026636 93 DTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM-EYKKIGKTIQDHADRYNYG 148 (235)
Q Consensus 93 d~~Rt~~~G~~~~~~~~~~~~~~~~~~~~~~~~kpG~-~~~ev~~~~~~~~~~~G~~ 148 (235)
-.+|..++ ++|.++..+...+.+.++...++-|. .++++-+.+.+.+...-|.
T Consensus 189 lSSRN~yL---~~Eerkia~nlyr~Lk~a~~~i~~G~~~~~elid~~~q~v~~~~f~ 242 (283)
T KOG3042|consen 189 LSSRNKYL---CPEERKIAENLYRGLKAAENAIRGGRLSRSELIDTVTQYVDSHDFK 242 (283)
T ss_pred eeccCccc---ChHHHHhhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHhhccCc
Confidence 34566555 78899999999999999999999986 7788888888877666554
No 110
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=21.82 E-value=97 Score=17.80 Aligned_cols=24 Identities=25% Similarity=0.227 Sum_probs=16.9
Q ss_pred HHHHHHHhhhCCCC-CCHHHHHHHH
Q 026636 9 AQVLEYAGTLVKPG-ITTDEIDKAV 32 (235)
Q Consensus 9 ~~~~~~~~~~~~~G-~te~el~~~~ 32 (235)
++-|+.+++.++.| +|-.+++..+
T Consensus 2 ee~l~~Ai~~v~~g~~S~r~AA~~y 26 (45)
T PF05225_consen 2 EEDLQKAIEAVKNGKMSIRKAAKKY 26 (45)
T ss_dssp HHHHHHHHHHHHTTSS-HHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 45677788888888 8887777654
No 111
>COG3140 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.77 E-value=1.4e+02 Score=18.22 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=24.5
Q ss_pred HHHHHHHhhhCCCCCCHHHHHHHHHHHHHHC
Q 026636 9 AQVLEYAGTLVKPGITTDEIDKAVHQMIIDN 39 (235)
Q Consensus 9 ~~~~~~~~~~~~~G~te~el~~~~~~~~~~~ 39 (235)
.++.+++.+....|||.-|.-+.+...+++.
T Consensus 14 Q~AVE~Iq~lMaeGmSsGEAIa~VA~elRe~ 44 (60)
T COG3140 14 QKAVERIQELMAEGMSSGEAIALVAQELREN 44 (60)
T ss_pred HHHHHHHHHHHHccccchhHHHHHHHHHHHH
Confidence 4567777777889999988888888888766
No 112
>PRK11507 ribosome-associated protein; Provisional
Probab=20.81 E-value=73 Score=20.53 Aligned_cols=15 Identities=13% Similarity=0.217 Sum_probs=12.5
Q ss_pred CCcCCCCCCeEEEEE
Q 026636 69 DSRALEDGDTINIDV 83 (235)
Q Consensus 69 ~~~~l~~Gd~v~id~ 83 (235)
..++|.+||+|.++-
T Consensus 49 RgkKl~~GD~V~~~g 63 (70)
T PRK11507 49 KRCKIVAGQTVSFAG 63 (70)
T ss_pred cCCCCCCCCEEEECC
Confidence 468999999999864
No 113
>PF03701 UPF0181: Uncharacterised protein family (UPF0181); InterPro: IPR005371 This family contains small proteins of about 50 amino acids of unknown function. The family includes YoaH P76260 from SWISSPROT.
Probab=20.63 E-value=2e+02 Score=17.20 Aligned_cols=31 Identities=26% Similarity=0.301 Sum_probs=23.8
Q ss_pred HHHHHHHhhhCCCCCCHHHHHHHHHHHHHHC
Q 026636 9 AQVLEYAGTLVKPGITTDEIDKAVHQMIIDN 39 (235)
Q Consensus 9 ~~~~~~~~~~~~~G~te~el~~~~~~~~~~~ 39 (235)
.++.+++-+....|||..|.-+.+...+++.
T Consensus 14 Q~AvE~Iq~LMaqGmSsgEAI~~VA~~iRe~ 44 (51)
T PF03701_consen 14 QQAVERIQELMAQGMSSGEAIAIVAQEIREE 44 (51)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 3566777777888999988888887777654
No 114
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=20.39 E-value=72 Score=27.92 Aligned_cols=34 Identities=9% Similarity=0.197 Sum_probs=25.3
Q ss_pred CCCchhhHHHHHHHhhhcCCceEeeccceecccc
Q 026636 127 PGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGR 160 (235)
Q Consensus 127 pG~~~~ev~~~~~~~~~~~G~~~~~~~~GHgiG~ 160 (235)
|-.+..|+.+...+++++.|......+.||++|-
T Consensus 139 P~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG 172 (389)
T PRK06765 139 PVVTILDFVRVQKELIKSLGIARLHAVMGPSMGG 172 (389)
T ss_pred CcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHH
Confidence 4477888888888888888877544468888874
No 115
>PF11439 CesA: Type III secretion system filament chaperone CesA; InterPro: IPR021545 This bacterial family of proteins with unknown function are the product of the gene Z5138. ; PDB: 2LHK_A 1XOU_B.
Probab=20.20 E-value=1.4e+02 Score=19.46 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCchhh
Q 026636 104 DDEARNLVKVTKDCLHKAISVCAPGMEYKK 133 (235)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~kpG~~~~e 133 (235)
..+.+++|+.+..-.+.+++.++|-...++
T Consensus 64 ~geerklydsalskieklietm~p~rs~~q 93 (95)
T PF11439_consen 64 YGEERKLYDSALSKIEKLIETMSPTRSKSQ 93 (95)
T ss_dssp CSHHTTHHHHHHHHHHHHHHHTS-TT-TTT
T ss_pred cchHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 457899999999999999999999776554
No 116
>KOG0064 consensus Peroxisomal long-chain acyl-CoA transporter, ABC superfamily [Lipid transport and metabolism]
Probab=20.10 E-value=1.1e+02 Score=28.26 Aligned_cols=24 Identities=33% Similarity=0.433 Sum_probs=18.0
Q ss_pred CCeEecccCCCCCcccCCcEEEEeeEEE
Q 026636 165 DPVVLHYRNNDHGRMVLNQTFTIEPMLT 192 (235)
Q Consensus 165 ~p~~~~~~~~~~~~l~~gmv~~iep~~~ 192 (235)
-|.+.+ +..++-+.+.|+|||+..
T Consensus 487 IpvItP----~~~vvv~~Ltf~i~~G~h 510 (728)
T KOG0064|consen 487 IPVITP----AGDVLVPKLTFQIEPGMH 510 (728)
T ss_pred Cceecc----CcceeecceeEEecCCce
Confidence 455554 566888899999998875
Done!