Query 026637
Match_columns 235
No_of_seqs 190 out of 286
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 18:23:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026637.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026637hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gyz_A Chaperone protein IPGC; 99.6 1E-14 3.4E-19 117.3 12.6 111 10-126 24-134 (151)
2 2pl2_A Hypothetical conserved 99.6 1.3E-13 4.6E-18 114.6 19.2 181 1-204 18-211 (217)
3 2pl2_A Hypothetical conserved 99.5 1E-13 3.4E-18 115.4 13.5 118 1-125 52-180 (217)
4 2vgx_A Chaperone SYCD; alterna 99.5 1.3E-13 4.5E-18 108.9 13.2 112 9-126 8-119 (148)
5 4ga2_A E3 SUMO-protein ligase 99.5 4.4E-14 1.5E-18 111.6 8.8 118 2-125 11-129 (150)
6 2xcb_A PCRH, regulatory protei 99.5 4.1E-13 1.4E-17 104.2 13.9 112 9-126 5-116 (142)
7 4gyw_A UDP-N-acetylglucosamine 99.5 3.1E-13 1.1E-17 133.6 16.5 119 1-125 22-140 (723)
8 4gco_A Protein STI-1; structur 99.5 6.1E-13 2.1E-17 102.5 12.0 109 11-125 2-110 (126)
9 2h6f_A Protein farnesyltransfe 99.5 5.7E-13 1.9E-17 122.1 13.3 119 1-125 110-229 (382)
10 3vtx_A MAMA; tetratricopeptide 99.4 3.5E-12 1.2E-16 101.3 14.2 118 2-125 53-170 (184)
11 3vtx_A MAMA; tetratricopeptide 99.4 1.2E-11 4E-16 98.3 16.4 119 1-125 18-136 (184)
12 3urz_A Uncharacterized protein 99.4 1.3E-12 4.4E-17 107.9 11.0 121 1-125 17-186 (208)
13 2h6f_A Protein farnesyltransfe 99.4 7.9E-12 2.7E-16 114.5 17.3 120 1-125 144-269 (382)
14 4gyw_A UDP-N-acetylglucosamine 99.4 1.6E-12 5.6E-17 128.5 12.6 119 1-125 56-174 (723)
15 2fo7_A Synthetic consensus TPR 99.4 9.6E-12 3.3E-16 91.1 13.8 118 2-125 15-132 (136)
16 2e2e_A Formate-dependent nitri 99.4 6.5E-12 2.2E-16 99.6 13.5 118 2-125 24-144 (177)
17 1a17_A Serine/threonine protei 99.4 5E-12 1.7E-16 97.5 12.4 121 1-125 26-146 (166)
18 4i17_A Hypothetical protein; T 99.4 5.6E-12 1.9E-16 103.7 13.4 124 1-125 20-146 (228)
19 2vq2_A PILW, putative fimbrial 99.4 1.1E-10 3.8E-15 93.5 20.6 190 1-207 21-211 (225)
20 3as5_A MAMA; tetratricopeptide 99.4 1.2E-11 4.1E-16 95.8 14.1 118 2-125 56-173 (186)
21 2ho1_A Type 4 fimbrial biogene 99.4 1.7E-10 5.9E-15 95.1 20.6 188 1-208 50-239 (252)
22 3qky_A Outer membrane assembly 99.3 4.7E-11 1.6E-15 100.5 16.9 122 1-125 28-177 (261)
23 3as5_A MAMA; tetratricopeptide 99.3 3.3E-11 1.1E-15 93.3 14.7 118 2-125 22-139 (186)
24 3hym_B Cell division cycle pro 99.3 3.5E-10 1.2E-14 95.8 22.2 118 2-125 70-188 (330)
25 3gyz_A Chaperone protein IPGC; 99.3 5.7E-12 1.9E-16 101.1 10.3 88 1-88 49-136 (151)
26 1w3b_A UDP-N-acetylglucosamine 99.3 7.8E-11 2.7E-15 103.9 18.2 119 1-125 148-266 (388)
27 2q7f_A YRRB protein; TPR, prot 99.3 1.4E-10 4.9E-15 94.4 18.1 187 1-207 36-222 (243)
28 4eqf_A PEX5-related protein; a 99.3 1.7E-10 5.7E-15 100.7 19.5 88 1-88 78-165 (365)
29 1fch_A Peroxisomal targeting s 99.3 4.6E-10 1.6E-14 97.1 22.0 124 1-125 77-246 (368)
30 4gco_A Protein STI-1; structur 99.3 1.3E-11 4.4E-16 95.0 10.8 89 1-89 26-114 (126)
31 3hym_B Cell division cycle pro 99.3 3.2E-10 1.1E-14 96.0 20.4 120 1-126 103-223 (330)
32 1w3b_A UDP-N-acetylglucosamine 99.3 1.6E-10 5.3E-15 102.0 19.1 117 2-124 47-163 (388)
33 4eqf_A PEX5-related protein; a 99.3 1.1E-11 3.8E-16 108.3 11.6 120 1-126 190-311 (365)
34 3upv_A Heat shock protein STI1 99.3 3E-11 1E-15 90.7 12.2 101 19-125 1-101 (126)
35 4i17_A Hypothetical protein; T 99.3 2.1E-11 7.2E-16 100.2 12.1 119 1-125 55-209 (228)
36 4gcn_A Protein STI-1; structur 99.3 3.1E-11 1E-15 92.7 12.0 105 20-125 6-112 (127)
37 1hh8_A P67PHOX, NCF-2, neutrop 99.3 9.6E-11 3.3E-15 94.7 15.4 121 1-125 19-150 (213)
38 2vsy_A XCC0866; transferase, g 99.3 5E-11 1.7E-15 112.1 15.5 118 2-125 3-120 (568)
39 1hxi_A PEX5, peroxisome target 99.3 1E-11 3.4E-16 94.8 8.8 95 25-125 20-114 (121)
40 2q7f_A YRRB protein; TPR, prot 99.3 3.6E-11 1.2E-15 97.9 12.6 118 2-125 105-222 (243)
41 3ieg_A DNAJ homolog subfamily 99.3 1.6E-09 5.5E-14 92.3 23.4 191 1-206 133-334 (359)
42 3uq3_A Heat shock protein STI1 99.3 4.5E-11 1.6E-15 97.8 13.0 116 5-126 122-237 (258)
43 3sz7_A HSC70 cochaperone (SGT) 99.3 5.6E-11 1.9E-15 93.6 12.7 103 18-126 7-109 (164)
44 2pzi_A Probable serine/threoni 99.3 7.8E-12 2.7E-16 121.7 9.3 118 1-125 446-563 (681)
45 1xnf_A Lipoprotein NLPI; TPR, 99.3 3.6E-11 1.2E-15 99.8 12.1 118 2-125 19-140 (275)
46 2vgx_A Chaperone SYCD; alterna 99.3 2.8E-11 9.4E-16 95.5 10.6 90 1-90 34-123 (148)
47 2xcb_A PCRH, regulatory protei 99.3 2.7E-11 9.2E-16 93.8 10.2 90 1-90 31-120 (142)
48 3u4t_A TPR repeat-containing p 99.3 1.4E-09 4.8E-14 90.4 21.4 191 1-207 50-250 (272)
49 2vsy_A XCC0866; transferase, g 99.3 7.1E-11 2.4E-15 111.1 15.0 120 1-126 36-158 (568)
50 2ho1_A Type 4 fimbrial biogene 99.3 1.4E-10 4.7E-15 95.6 15.0 118 2-125 119-238 (252)
51 2vyi_A SGTA protein; chaperone 99.3 4.9E-11 1.7E-15 87.4 11.0 102 18-125 8-109 (131)
52 3fp2_A TPR repeat-containing p 99.3 8E-10 2.7E-14 100.5 21.1 203 1-209 289-493 (537)
53 3ieg_A DNAJ homolog subfamily 99.3 8E-10 2.7E-14 94.2 19.7 124 1-125 16-149 (359)
54 2pzi_A Probable serine/threoni 99.3 2.4E-10 8.1E-15 111.2 18.6 118 1-125 404-529 (681)
55 3cv0_A Peroxisome targeting si 99.3 5.9E-11 2E-15 100.4 12.6 119 2-126 152-270 (327)
56 2r5s_A Uncharacterized protein 99.3 4E-11 1.4E-15 95.8 10.9 115 2-123 20-135 (176)
57 3q49_B STIP1 homology and U bo 99.2 1.4E-10 4.9E-15 87.2 13.2 104 17-126 4-107 (137)
58 2kck_A TPR repeat; tetratricop 99.2 6.5E-11 2.2E-15 84.8 10.8 104 18-125 2-106 (112)
59 1fch_A Peroxisomal targeting s 99.2 5.1E-11 1.7E-15 103.2 12.0 119 2-126 195-315 (368)
60 3k9i_A BH0479 protein; putativ 99.2 1.4E-11 4.7E-16 92.4 7.2 90 1-90 3-95 (117)
61 2vq2_A PILW, putative fimbrial 99.2 9.2E-11 3.2E-15 94.0 12.5 120 1-126 55-177 (225)
62 4ga2_A E3 SUMO-protein ligase 99.2 4.6E-11 1.6E-15 94.1 10.5 90 1-90 44-134 (150)
63 4abn_A Tetratricopeptide repea 99.2 9E-11 3.1E-15 109.2 13.8 117 2-125 116-250 (474)
64 2lni_A Stress-induced-phosphop 99.2 1.6E-10 5.4E-15 85.5 12.3 103 17-125 11-113 (133)
65 3cv0_A Peroxisome targeting si 99.2 9.4E-11 3.2E-15 99.2 12.5 124 1-125 185-315 (327)
66 1hxi_A PEX5, peroxisome target 99.2 6.9E-11 2.4E-15 90.1 10.4 89 1-89 30-118 (121)
67 3sz7_A HSC70 cochaperone (SGT) 99.2 1.4E-10 4.6E-15 91.3 12.4 90 1-90 24-113 (164)
68 3u4t_A TPR repeat-containing p 99.2 1.5E-10 5.2E-15 96.3 13.3 118 1-125 16-137 (272)
69 1xnf_A Lipoprotein NLPI; TPR, 99.2 1.2E-10 4.1E-15 96.6 12.5 118 1-125 56-173 (275)
70 3upv_A Heat shock protein STI1 99.2 1.1E-10 3.7E-15 87.6 10.7 86 1-86 17-102 (126)
71 2y4t_A DNAJ homolog subfamily 99.2 1.4E-09 4.9E-14 96.8 19.7 192 1-207 39-240 (450)
72 4abn_A Tetratricopeptide repea 99.2 7.9E-11 2.7E-15 109.6 11.8 115 4-125 84-208 (474)
73 3qky_A Outer membrane assembly 99.2 1.4E-10 4.6E-15 97.6 12.2 122 1-125 65-224 (261)
74 3qou_A Protein YBBN; thioredox 99.2 1.3E-10 4.4E-15 100.9 12.2 118 2-125 131-248 (287)
75 3uq3_A Heat shock protein STI1 99.2 2E-10 6.9E-15 93.9 12.6 119 1-125 51-202 (258)
76 2r5s_A Uncharacterized protein 99.2 1.7E-10 6E-15 92.1 11.8 120 1-125 53-173 (176)
77 2xpi_A Anaphase-promoting comp 99.2 1.4E-09 4.6E-14 100.7 19.5 118 2-125 387-504 (597)
78 3edt_B KLC 2, kinesin light ch 99.2 3.3E-10 1.1E-14 93.4 13.5 124 1-125 56-198 (283)
79 3qou_A Protein YBBN; thioredox 99.2 1.1E-10 3.9E-15 101.2 10.5 121 1-125 164-284 (287)
80 1p5q_A FKBP52, FK506-binding p 99.2 1.9E-10 6.6E-15 102.4 12.1 119 1-125 160-294 (336)
81 2lni_A Stress-induced-phosphop 99.2 4.1E-10 1.4E-14 83.2 12.0 104 1-109 29-132 (133)
82 2xpi_A Anaphase-promoting comp 99.2 2.2E-09 7.7E-14 99.2 19.5 118 2-125 353-470 (597)
83 1na0_A Designed protein CTPR3; 99.2 4.7E-10 1.6E-14 81.4 11.8 102 18-125 4-106 (125)
84 1wao_1 Serine/threonine protei 99.1 7.3E-11 2.5E-15 110.5 8.8 114 1-120 19-134 (477)
85 2gw1_A Mitochondrial precursor 99.1 3.4E-09 1.2E-13 95.4 19.4 195 1-207 283-478 (514)
86 2vyi_A SGTA protein; chaperone 99.1 5.6E-10 1.9E-14 81.6 11.6 106 1-112 25-130 (131)
87 1na0_A Designed protein CTPR3; 99.1 1.2E-09 4.3E-14 79.1 13.0 103 1-108 22-124 (125)
88 3q49_B STIP1 homology and U bo 99.1 3.3E-10 1.1E-14 85.2 10.2 88 1-88 22-109 (137)
89 2ond_A Cleavage stimulation fa 99.1 2E-09 6.7E-14 93.5 16.5 115 4-126 80-199 (308)
90 1hz4_A MALT regulatory protein 99.1 4E-09 1.4E-13 92.6 18.1 125 1-126 27-165 (373)
91 3mkr_A Coatomer subunit epsilo 99.1 2E-09 6.9E-14 93.9 16.0 113 2-125 115-229 (291)
92 3gw4_A Uncharacterized protein 99.1 4.2E-10 1.4E-14 89.5 10.5 125 1-126 39-177 (203)
93 1elr_A TPR2A-domain of HOP; HO 99.1 1.5E-09 5.1E-14 79.5 12.7 105 20-125 2-108 (131)
94 2dba_A Smooth muscle cell asso 99.1 8.8E-10 3E-14 83.1 11.7 104 16-125 22-128 (148)
95 1elw_A TPR1-domain of HOP; HOP 99.1 1.6E-09 5.5E-14 77.9 12.5 98 22-125 4-101 (118)
96 3edt_B KLC 2, kinesin light ch 99.1 3.4E-10 1.2E-14 93.3 9.9 124 1-125 98-281 (283)
97 1p5q_A FKBP52, FK506-binding p 99.1 1.6E-10 5.4E-15 102.9 8.3 114 6-125 131-259 (336)
98 2y4t_A DNAJ homolog subfamily 99.1 2.5E-09 8.4E-14 95.3 16.0 123 1-125 190-324 (450)
99 1qqe_A Vesicular transport pro 99.1 7E-10 2.4E-14 96.0 12.1 122 2-124 91-227 (292)
100 2xev_A YBGF; tetratricopeptide 99.1 1.5E-09 5E-14 80.7 12.3 99 24-125 4-105 (129)
101 2hr2_A Hypothetical protein; a 99.1 2.9E-10 9.8E-15 93.2 9.0 92 1-92 24-138 (159)
102 2yhc_A BAMD, UPF0169 lipoprote 99.1 1.5E-09 5E-14 90.2 13.4 124 1-125 17-176 (225)
103 2kck_A TPR repeat; tetratricop 99.1 7.4E-10 2.5E-14 79.2 10.1 89 1-89 19-110 (112)
104 3urz_A Uncharacterized protein 99.1 5.7E-09 2E-13 85.8 16.8 99 21-125 3-117 (208)
105 2hr2_A Hypothetical protein; a 99.1 1E-09 3.4E-14 90.0 11.9 100 21-126 10-132 (159)
106 2c2l_A CHIP, carboxy terminus 99.1 4.4E-10 1.5E-14 97.3 10.1 90 1-90 17-106 (281)
107 4a1s_A PINS, partner of inscut 99.1 6E-09 2E-13 91.9 17.6 204 1-208 61-293 (411)
108 3fp2_A TPR repeat-containing p 99.1 3.4E-09 1.2E-13 96.3 16.4 118 1-125 256-373 (537)
109 1elw_A TPR1-domain of HOP; HOP 99.1 1.9E-09 6.5E-14 77.5 11.7 89 1-89 17-105 (118)
110 4gcn_A Protein STI-1; structur 99.1 4.9E-10 1.7E-14 85.8 8.9 88 1-88 21-115 (127)
111 2ond_A Cleavage stimulation fa 99.1 2.3E-09 8E-14 93.0 14.3 119 1-125 112-232 (308)
112 3ro3_A PINS homolog, G-protein 99.1 7.8E-10 2.7E-14 83.3 9.8 125 1-126 22-159 (164)
113 3nf1_A KLC 1, kinesin light ch 99.1 6.7E-09 2.3E-13 87.0 16.5 122 1-125 40-182 (311)
114 2yhc_A BAMD, UPF0169 lipoprote 99.1 1.1E-09 3.6E-14 91.0 11.3 122 1-125 54-213 (225)
115 2xev_A YBGF; tetratricopeptide 99.1 1.2E-09 4E-14 81.3 10.2 89 1-89 15-109 (129)
116 3mkr_A Coatomer subunit epsilo 99.1 3.7E-09 1.3E-13 92.2 15.0 119 1-125 143-264 (291)
117 3ro2_A PINS homolog, G-protein 99.1 1.2E-08 3.9E-13 85.5 17.4 204 1-208 18-253 (338)
118 3rkv_A Putative peptidylprolyl 99.0 6.8E-10 2.3E-14 87.1 8.9 89 1-89 24-130 (162)
119 2fbn_A 70 kDa peptidylprolyl i 99.0 1.2E-09 3.9E-14 88.5 10.5 115 1-121 51-182 (198)
120 2gw1_A Mitochondrial precursor 99.0 2.9E-09 1E-13 95.8 14.1 124 1-125 317-444 (514)
121 2kat_A Uncharacterized protein 99.0 1.4E-09 4.7E-14 80.6 9.9 85 5-89 2-86 (115)
122 1a17_A Serine/threonine protei 99.0 4E-09 1.4E-13 80.9 12.9 99 21-125 12-110 (166)
123 1qqe_A Vesicular transport pro 99.0 1.3E-09 4.3E-14 94.4 10.9 125 1-126 50-188 (292)
124 2c2l_A CHIP, carboxy terminus 99.0 3.6E-09 1.2E-13 91.6 13.6 102 19-126 1-102 (281)
125 2dba_A Smooth muscle cell asso 99.0 4.4E-09 1.5E-13 79.2 12.4 89 1-89 41-132 (148)
126 3gw4_A Uncharacterized protein 99.0 3E-09 1E-13 84.5 11.9 124 1-125 5-136 (203)
127 3ulq_A Response regulator aspa 99.0 7.5E-09 2.6E-13 91.7 15.6 199 1-207 156-368 (383)
128 3sf4_A G-protein-signaling mod 99.0 3.1E-08 1.1E-12 86.1 18.1 204 1-208 22-257 (406)
129 3k9i_A BH0479 protein; putativ 99.0 5E-10 1.7E-14 83.7 5.5 87 34-126 2-91 (117)
130 3nf1_A KLC 1, kinesin light ch 99.0 1.2E-09 3.9E-14 91.8 8.2 124 1-125 124-307 (311)
131 2fbn_A 70 kDa peptidylprolyl i 99.0 6.7E-10 2.3E-14 89.9 6.5 99 21-125 37-151 (198)
132 4a1s_A PINS, partner of inscut 99.0 1.3E-08 4.6E-13 89.6 15.3 204 1-208 99-333 (411)
133 1hz4_A MALT regulatory protein 99.0 4.8E-08 1.6E-12 85.6 18.7 124 1-125 106-244 (373)
134 2l6j_A TPR repeat-containing p 99.0 4.8E-10 1.6E-14 81.1 4.7 100 21-121 3-103 (111)
135 1ouv_A Conserved hypothetical 99.0 2E-07 6.8E-12 78.3 21.3 113 1-125 19-143 (273)
136 1zu2_A Mitochondrial import re 99.0 5.2E-10 1.8E-14 91.6 5.0 87 2-88 16-123 (158)
137 2fo7_A Synthetic consensus TPR 98.9 1.7E-08 5.7E-13 73.5 12.4 97 23-125 2-98 (136)
138 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 3.9E-09 1.3E-13 97.9 11.1 119 1-125 281-415 (457)
139 3sf4_A G-protein-signaling mod 98.9 2.6E-08 9.1E-13 86.5 15.2 206 1-210 100-339 (406)
140 3ulq_A Response regulator aspa 98.9 8.8E-09 3E-13 91.2 12.1 124 1-125 116-253 (383)
141 3rkv_A Putative peptidylprolyl 98.9 9.6E-09 3.3E-13 80.4 11.0 98 22-125 11-126 (162)
142 1ouv_A Conserved hypothetical 98.9 3.5E-07 1.2E-11 76.7 21.3 178 1-204 55-248 (273)
143 3ma5_A Tetratricopeptide repea 98.9 6E-09 2E-13 76.3 8.9 72 18-89 3-74 (100)
144 1kt0_A FKBP51, 51 kDa FK506-bi 98.9 9.8E-10 3.3E-14 102.0 5.2 113 7-125 253-380 (457)
145 2ifu_A Gamma-SNAP; membrane fu 98.9 7.4E-09 2.5E-13 90.1 10.4 121 1-123 89-222 (307)
146 3ro2_A PINS homolog, G-protein 98.9 4.1E-08 1.4E-12 82.2 14.3 204 1-208 56-293 (338)
147 1elr_A TPR2A-domain of HOP; HO 98.9 8.5E-09 2.9E-13 75.4 8.9 88 1-88 17-111 (131)
148 2if4_A ATFKBP42; FKBP-like, al 98.9 3E-09 1E-13 94.8 7.7 119 1-125 192-328 (338)
149 4g1t_A Interferon-induced prot 98.9 1.5E-08 5.2E-13 91.1 11.9 118 2-125 227-363 (472)
150 1ihg_A Cyclophilin 40; ppiase 98.9 6.7E-09 2.3E-13 94.2 9.6 111 1-117 236-362 (370)
151 2e2e_A Formate-dependent nitri 98.9 1.2E-08 4E-13 80.6 9.6 90 1-90 57-149 (177)
152 2l6j_A TPR repeat-containing p 98.9 8.9E-10 3E-14 79.6 2.8 84 1-84 17-106 (111)
153 2qfc_A PLCR protein; TPR, HTH, 98.9 6.4E-08 2.2E-12 83.1 15.0 123 2-125 129-266 (293)
154 1na3_A Designed protein CTPR2; 98.8 2.3E-08 8E-13 69.6 9.8 84 20-108 7-90 (91)
155 3q15_A PSP28, response regulat 98.8 1.4E-07 4.8E-12 83.6 16.9 125 1-126 154-291 (378)
156 3u3w_A Transcriptional activat 98.8 3.1E-08 1E-12 85.2 12.0 125 2-126 129-267 (293)
157 2ooe_A Cleavage stimulation fa 98.8 2.3E-07 7.8E-12 86.2 18.5 115 6-125 256-385 (530)
158 1hh8_A P67PHOX, NCF-2, neutrop 98.8 2.2E-08 7.7E-13 80.5 10.2 88 1-88 50-153 (213)
159 2qfc_A PLCR protein; TPR, HTH, 98.8 2.6E-07 9E-12 79.2 16.8 125 1-126 88-226 (293)
160 2ooe_A Cleavage stimulation fa 98.8 9.2E-07 3.1E-11 82.1 21.4 115 6-126 304-421 (530)
161 3dra_A Protein farnesyltransfe 98.8 3.3E-07 1.1E-11 81.8 17.5 116 5-126 50-176 (306)
162 1zu2_A Mitochondrial import re 98.8 7.4E-09 2.5E-13 84.7 5.9 90 32-126 12-121 (158)
163 4f3v_A ESX-1 secretion system 98.8 3E-08 1E-12 88.1 10.1 121 1-125 115-237 (282)
164 2kat_A Uncharacterized protein 98.8 2.2E-08 7.6E-13 73.9 7.9 81 39-125 2-82 (115)
165 4g1t_A Interferon-induced prot 98.8 5.1E-08 1.8E-12 87.6 11.5 118 2-125 152-276 (472)
166 1na3_A Designed protein CTPR2; 98.7 4E-08 1.4E-12 68.4 8.4 70 1-70 22-91 (91)
167 2ifu_A Gamma-SNAP; membrane fu 98.7 4.2E-08 1.4E-12 85.3 9.4 124 1-126 49-185 (307)
168 3ro3_A PINS homolog, G-protein 98.7 1.1E-07 3.9E-12 71.2 10.6 103 22-125 9-118 (164)
169 2kc7_A BFR218_protein; tetratr 98.7 1.6E-07 5.4E-12 67.1 9.9 86 27-126 5-91 (99)
170 3dra_A Protein farnesyltransfe 98.7 3.8E-07 1.3E-11 81.4 13.9 189 3-205 84-285 (306)
171 3u3w_A Transcriptional activat 98.6 9.4E-07 3.2E-11 75.7 15.4 125 1-126 88-226 (293)
172 3rjv_A Putative SEL1 repeat pr 98.6 5.5E-06 1.9E-10 68.2 19.5 144 5-170 3-154 (212)
173 1dce_A Protein (RAB geranylger 98.6 4.7E-07 1.6E-11 86.9 14.7 117 4-125 45-173 (567)
174 4f3v_A ESX-1 secretion system 98.6 1.3E-07 4.3E-12 84.0 9.8 185 2-207 20-237 (282)
175 3rjv_A Putative SEL1 repeat pr 98.6 5.9E-07 2E-11 74.1 13.1 81 3-85 68-158 (212)
176 1wao_1 Serine/threonine protei 98.6 1.7E-08 5.9E-13 94.3 4.2 96 24-125 8-103 (477)
177 3ly7_A Transcriptional activat 98.6 1.5E-07 5.1E-12 86.6 9.9 114 4-125 215-339 (372)
178 3q15_A PSP28, response regulat 98.6 2.6E-07 8.7E-12 81.9 11.0 124 1-125 114-251 (378)
179 2kc7_A BFR218_protein; tetratr 98.6 1.4E-07 4.9E-12 67.3 6.7 81 1-89 13-94 (99)
180 1ihg_A Cyclophilin 40; ppiase 98.5 3.1E-07 1.1E-11 83.1 10.3 97 23-125 224-336 (370)
181 2if4_A ATFKBP42; FKBP-like, al 98.5 2E-07 6.7E-12 83.0 7.5 99 21-125 178-293 (338)
182 3ma5_A Tetratricopeptide repea 98.5 6.3E-07 2.1E-11 65.3 9.0 70 51-126 2-71 (100)
183 3q7a_A Farnesyltransferase alp 98.5 1.2E-06 4.3E-11 79.8 12.2 133 2-151 68-211 (349)
184 3dss_A Geranylgeranyl transfer 98.5 3.9E-06 1.3E-10 75.9 15.0 115 5-125 47-174 (331)
185 3e4b_A ALGK; tetratricopeptide 98.4 1E-05 3.6E-10 74.4 17.0 110 4-123 195-314 (452)
186 3bee_A Putative YFRE protein; 98.4 1.8E-06 6E-11 63.7 9.3 72 18-89 2-76 (93)
187 3e4b_A ALGK; tetratricopeptide 98.4 4.6E-05 1.6E-09 70.1 20.0 93 24-125 178-280 (452)
188 3ly7_A Transcriptional activat 98.3 2.1E-06 7.3E-11 78.9 10.4 76 13-89 268-343 (372)
189 1dce_A Protein (RAB geranylger 98.3 2E-06 7E-11 82.4 10.4 116 4-125 89-221 (567)
190 3q7a_A Farnesyltransferase alp 98.3 1.8E-05 6.3E-10 72.0 15.4 119 1-125 101-237 (349)
191 2xm6_A Protein corresponding t 98.3 0.00013 4.4E-09 66.8 21.1 112 2-125 57-180 (490)
192 3n71_A Histone lysine methyltr 98.3 1.4E-06 4.8E-11 82.5 7.8 121 2-125 323-464 (490)
193 2xm6_A Protein corresponding t 98.3 0.00016 5.5E-09 66.2 21.4 112 2-125 93-216 (490)
194 3n71_A Histone lysine methyltr 98.2 6.9E-06 2.4E-10 77.7 11.0 92 32-126 319-423 (490)
195 1klx_A Cysteine rich protein B 98.2 1.3E-05 4.5E-10 62.1 10.5 109 3-125 10-126 (138)
196 3u64_A Protein TP_0956; tetrat 98.2 2.3E-06 7.8E-11 76.5 6.4 87 3-89 178-273 (301)
197 3dss_A Geranylgeranyl transfer 98.2 0.00011 3.8E-09 66.3 17.6 116 4-125 90-222 (331)
198 3qww_A SET and MYND domain-con 98.0 1.2E-05 4.2E-10 74.8 8.3 89 35-126 311-412 (433)
199 3qww_A SET and MYND domain-con 97.9 1.4E-05 4.8E-10 74.5 6.9 88 1-88 311-414 (433)
200 3mv2_B Coatomer subunit epsilo 97.9 8.8E-05 3E-09 66.5 11.5 114 2-122 114-237 (310)
201 4b4t_Q 26S proteasome regulato 97.9 0.00015 5E-09 64.1 12.8 146 2-151 18-187 (434)
202 3qwp_A SET and MYND domain-con 97.9 5.3E-05 1.8E-09 70.3 10.1 92 32-126 297-401 (429)
203 3bee_A Putative YFRE protein; 97.8 3.8E-05 1.3E-09 56.4 5.6 56 4-59 25-80 (93)
204 1xi4_A Clathrin heavy chain; a 97.7 0.00023 7.8E-09 75.1 12.9 74 2-85 1090-1163(1630)
205 3u64_A Protein TP_0956; tetrat 97.7 0.00036 1.2E-08 62.3 11.9 110 12-126 141-270 (301)
206 1xi4_A Clathrin heavy chain; a 97.6 0.0067 2.3E-07 64.2 22.0 106 1-125 1118-1250(1630)
207 3qwp_A SET and MYND domain-con 97.6 0.00013 4.5E-09 67.6 7.8 88 1-88 300-403 (429)
208 4b4t_Q 26S proteasome regulato 97.6 0.00027 9.3E-09 62.4 9.4 124 2-126 69-205 (434)
209 1b89_A Protein (clathrin heavy 97.5 0.00035 1.2E-08 65.6 10.2 200 1-234 74-294 (449)
210 2v5f_A Prolyl 4-hydroxylase su 97.5 0.00022 7.6E-09 52.5 6.8 66 1-66 18-90 (104)
211 1klx_A Cysteine rich protein B 97.5 0.00093 3.2E-08 51.4 10.3 79 3-85 40-126 (138)
212 1pc2_A Mitochondria fission pr 97.4 0.00059 2E-08 55.2 8.6 85 37-126 13-101 (152)
213 4e6h_A MRNA 3'-END-processing 97.4 0.0048 1.6E-07 60.5 15.9 185 6-205 327-531 (679)
214 2v5f_A Prolyl 4-hydroxylase su 97.2 0.002 6.7E-08 47.2 9.1 69 56-125 5-75 (104)
215 3mv2_B Coatomer subunit epsilo 97.2 0.0018 6.3E-08 57.9 10.4 113 7-125 85-207 (310)
216 1pc2_A Mitochondria fission pr 97.1 0.0011 3.7E-08 53.6 7.3 84 5-88 15-103 (152)
217 4e6h_A MRNA 3'-END-processing 97.1 0.0044 1.5E-07 60.8 12.5 189 2-208 357-571 (679)
218 4g26_A Pentatricopeptide repea 96.5 0.18 6E-06 47.3 17.8 164 31-216 35-213 (501)
219 1nzn_A CGI-135 protein, fissio 96.3 0.019 6.3E-07 44.9 8.5 85 37-126 16-104 (126)
220 1b89_A Protein (clathrin heavy 96.2 0.0081 2.8E-07 56.3 7.1 77 1-86 161-237 (449)
221 3ffl_A Anaphase-promoting comp 96.2 0.027 9.4E-07 46.0 9.2 93 29-122 27-148 (167)
222 2uy1_A Cleavage stimulation fa 96.0 0.062 2.1E-06 50.1 11.8 114 5-125 196-349 (493)
223 2ff4_A Probable regulatory pro 95.4 0.12 4.1E-06 46.8 11.3 83 2-84 129-233 (388)
224 2uy1_A Cleavage stimulation fa 95.1 0.15 5.3E-06 47.4 11.3 113 2-122 227-380 (493)
225 4g26_A Pentatricopeptide repea 94.8 0.46 1.6E-05 44.4 13.7 116 5-126 87-205 (501)
226 3ffl_A Anaphase-promoting comp 93.6 0.2 6.8E-06 40.9 7.1 67 23-90 64-155 (167)
227 4h7y_A Dual specificity protei 92.1 0.83 2.9E-05 36.9 8.8 98 5-109 36-141 (161)
228 1nzn_A CGI-135 protein, fissio 89.8 0.94 3.2E-05 35.1 6.9 83 6-88 19-106 (126)
229 2ff4_A Probable regulatory pro 88.9 4.9 0.00017 36.0 12.0 85 34-124 127-233 (388)
230 3o48_A Mitochondria fission 1 88.7 2.1 7.2E-05 33.6 8.2 66 55-125 39-107 (134)
231 3o48_A Mitochondria fission 1 88.1 0.73 2.5E-05 36.2 5.1 67 22-88 40-110 (134)
232 4gns_B Protein CSD3, chitin bi 87.5 1.9 6.5E-05 42.8 8.9 59 24-82 339-397 (754)
233 1y8m_A FIS1; mitochondria, unk 87.5 0.78 2.7E-05 36.5 5.0 70 19-88 36-109 (144)
234 4h7y_A Dual specificity protei 86.8 5.7 0.00019 32.0 9.7 99 18-125 9-123 (161)
235 1y8m_A FIS1; mitochondria, unk 85.4 10 0.00036 29.9 10.6 69 53-126 36-107 (144)
236 4fhn_B Nucleoporin NUP120; pro 84.6 28 0.00097 35.5 16.2 190 14-209 834-1052(1139)
237 3mkq_A Coatomer beta'-subunit; 82.6 5.7 0.00019 37.5 9.5 45 33-82 663-707 (814)
238 4gns_B Protein CSD3, chitin bi 77.4 22 0.00074 35.2 11.9 112 5-122 266-397 (754)
239 1zbp_A Hypothetical protein VP 75.7 13 0.00043 32.5 8.6 118 2-125 11-129 (273)
240 1ya0_A SMG-7 transcript varian 75.4 8.5 0.00029 36.1 8.1 57 28-84 158-214 (497)
241 1zbp_A Hypothetical protein VP 74.1 7.2 0.00025 34.0 6.7 125 31-209 6-131 (273)
242 3spa_A Mtrpol, DNA-directed RN 71.2 47 0.0016 34.4 12.7 101 23-127 128-232 (1134)
243 3mkq_A Coatomer beta'-subunit; 68.2 59 0.002 30.3 12.2 103 66-206 662-764 (814)
244 3txn_A 26S proteasome regulato 63.8 40 0.0014 30.6 9.7 98 27-125 104-210 (394)
245 4gq2_M Nucleoporin NUP120; bet 62.4 1.3E+02 0.0045 30.1 16.8 93 28-125 816-926 (950)
246 1qsa_A Protein (soluble lytic 56.5 55 0.0019 31.4 9.7 95 23-124 253-347 (618)
247 1ya0_A SMG-7 transcript varian 54.9 1.3E+02 0.0046 27.9 15.8 126 60-208 156-284 (497)
248 3spa_A Mtrpol, DNA-directed RN 45.3 1.3E+02 0.0043 31.3 10.5 115 2-127 141-262 (1134)
249 1qsa_A Protein (soluble lytic 42.9 83 0.0028 30.1 8.5 80 4-84 268-347 (618)
250 4b4t_R RPN7, 26S proteasome re 40.5 1.6E+02 0.0056 26.2 9.8 101 24-125 133-237 (429)
251 2p58_C Putative type III secre 40.3 1.2E+02 0.0039 22.9 7.5 77 31-119 14-92 (116)
252 2uwj_G Type III export protein 39.9 1.1E+02 0.0037 23.0 6.9 77 31-119 13-91 (115)
253 4fhn_B Nucleoporin NUP120; pro 36.8 3.5E+02 0.012 27.4 14.0 92 28-125 818-928 (1139)
254 1wy6_A Hypothetical protein ST 33.8 1.8E+02 0.0062 23.2 8.1 57 28-84 96-153 (172)
255 2w2u_A Hypothetical P60 katani 33.4 61 0.0021 22.7 4.5 34 38-86 16-49 (83)
256 3mkq_B Coatomer subunit alpha; 30.5 1.5E+02 0.0052 23.7 7.0 45 33-82 16-60 (177)
257 2v6y_A AAA family ATPase, P60 29.6 78 0.0027 22.0 4.5 34 38-86 8-41 (83)
258 4gq2_M Nucleoporin NUP120; bet 29.0 50 0.0017 33.2 4.6 40 10-49 828-867 (950)
259 4ady_A RPN2, 26S proteasome re 28.8 4.8E+02 0.016 26.5 18.9 188 1-206 387-588 (963)
260 2crb_A Nuclear receptor bindin 27.5 69 0.0023 23.5 3.9 70 94-165 14-83 (97)
261 2ca5_A MXIH; transport protein 26.3 66 0.0022 23.0 3.5 33 36-68 24-56 (85)
262 2ijq_A Hypothetical protein; s 26.2 2.4E+02 0.0082 22.2 8.3 64 27-90 37-109 (161)
263 4b4t_R RPN7, 26S proteasome re 25.2 80 0.0028 28.3 4.9 67 56-125 131-197 (429)
264 2crb_A Nuclear receptor bindin 24.6 1.1E+02 0.0036 22.5 4.5 28 22-49 15-42 (97)
265 4a1g_A Mitotic checkpoint seri 23.3 1E+02 0.0035 24.2 4.6 30 23-52 102-131 (152)
266 3txn_A 26S proteasome regulato 22.9 4.1E+02 0.014 23.7 17.2 195 24-227 21-230 (394)
267 2g0u_A Type III secretion syst 20.3 1.6E+02 0.0056 21.3 4.7 33 36-68 30-62 (92)
No 1
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.60 E-value=1e-14 Score=117.32 Aligned_cols=111 Identities=13% Similarity=0.040 Sum_probs=103.2
Q ss_pred HHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccC
Q 026637 10 IIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSC 89 (235)
Q Consensus 10 ~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~ 89 (235)
.+.+++..+|+++.++..+|..+.+.|+|++|++.++++++++|+++.++..+|.++..+|++++|+..++++....|..
T Consensus 24 ~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~ 103 (151)
T 3gyz_A 24 TLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND 103 (151)
T ss_dssp CTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC
T ss_pred CHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 90 SSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 90 ~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+ ..+.++|.+++..| ++++|+..|++.+...
T Consensus 104 ~-----~~~~~lg~~~~~lg-~~~eA~~~~~~al~l~ 134 (151)
T 3gyz_A 104 Y-----TPVFHTGQCQLRLK-APLKAKECFELVIQHS 134 (151)
T ss_dssp C-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHC
T ss_pred c-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHhC
Confidence 5 34446999999998 9999999999999873
No 2
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.59 E-value=1.3e-13 Score=114.59 Aligned_cols=181 Identities=19% Similarity=0.156 Sum_probs=127.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-----------
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHD----------- 69 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~----------- 69 (235)
.|+.++++..+++++..+|+++.++..+|.++...|++++|+..++++++++|+++.++..+|.++..+
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~ 97 (217)
T 2pl2_A 18 LGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGK 97 (217)
T ss_dssp TTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccc
Confidence 489999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHH
Q 026637 70 CCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVY 149 (235)
Q Consensus 70 Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~ 149 (235)
|++++|+..++++....|+.+ -.+..+|.++...| ++++|++.|++.+... + .+....+-+.++..+
T Consensus 98 g~~~~A~~~~~~al~~~P~~~-----~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~---~---~~~~~~~la~~~~~~- 164 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYA-----PLHLQRGLVYALLG-ERDKAEASLKQALALE---D---TPEIRSALAELYLSM- 164 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHC---C---CHHHHHHHHHHHHHH-
T ss_pred cCHHHHHHHHHHHHHhCcccH-----HHHHHHHHHHHHcC-ChHHHHHHHHHHHhcc---c---chHHHHHHHHHHHHc-
Confidence 999999999999999988743 23445999999998 9999999999999873 1 232233333332221
Q ss_pred hcCcccccccchHHHHHHHHhhhcchhcchhhHHH--HHHHhcCCCchHHHHHHHHH
Q 026637 150 VRGELDVFGNRLKVLADCVADQANWYLECHLDLLI--LWALANTGEVSKAEDLLKGL 204 (235)
Q Consensus 150 l~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~--~~al~~ag~~~~~~~ll~~~ 204 (235)
|- ..+=...+-..+...++ +.+++. ..++...|+.+.+.+.++..
T Consensus 165 --g~---~~~A~~~~~~al~~~P~-----~~~~~~~la~~~~~~g~~~~A~~~~~~~ 211 (217)
T 2pl2_A 165 --GR---LDEALAQYAKALEQAPK-----DLDLRVRYASALLLKGKAEEAARAAALE 211 (217)
T ss_dssp --TC---HHHHHHHHHHHHHHSTT-----CHHHHHHHHHHHTC--------------
T ss_pred --CC---HHHHHHHHHHHHHhCCC-----ChHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 22 12223333333332222 224444 45566777777776655544
No 3
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.53 E-value=1e-13 Score=115.35 Aligned_cols=118 Identities=12% Similarity=0.019 Sum_probs=110.3
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHh-----------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLEL-----------GQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHD 69 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~-----------g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~ 69 (235)
.|+.++++..+++++..+|+++.++..+|.++... |++++|+..+++|++++|+++.++..+|.++..+
T Consensus 52 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~ 131 (217)
T 2pl2_A 52 LGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQRGLVYALL 131 (217)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHc
Confidence 58999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 70 CCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 70 Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
|++++|+..++++.... ..+ -.+.++|.++...| ++++|++.|++.+..
T Consensus 132 g~~~~A~~~~~~al~~~-~~~-----~~~~~la~~~~~~g-~~~~A~~~~~~al~~ 180 (217)
T 2pl2_A 132 GERDKAEASLKQALALE-DTP-----EIRSALAELYLSMG-RLDEALAQYAKALEQ 180 (217)
T ss_dssp TCHHHHHHHHHHHHHHC-CCH-----HHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhcc-cch-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 99999999999999887 422 34556999999998 999999999999886
No 4
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.53 E-value=1.3e-13 Score=108.95 Aligned_cols=112 Identities=13% Similarity=-0.042 Sum_probs=104.0
Q ss_pred HHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc
Q 026637 9 DIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 9 ~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~ 88 (235)
..+++++..+|++...+..+|..+...|+|++|+..++++++++|+++.++..+|.++..+|++++|+..++++....|.
T Consensus 8 ~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~ 87 (148)
T 2vgx_A 8 GTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIX 87 (148)
T ss_dssp CSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred hhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 89 CSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 89 ~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.+ ..+.++|.+++..| ++++|++.|++.+...
T Consensus 88 ~~-----~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~ 119 (148)
T 2vgx_A 88 EP-----RFPFHAAECLLQXG-ELAEAESGLFLAQELI 119 (148)
T ss_dssp CT-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred Cc-----hHHHHHHHHHHHcC-CHHHHHHHHHHHHHHC
Confidence 54 34456999999998 9999999999998873
No 5
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.51 E-value=4.4e-14 Score=111.58 Aligned_cols=118 Identities=8% Similarity=-0.045 Sum_probs=107.1
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..++++++..|+++..+..+|..+.+.|+|++|++.++++++++|+++.++..+|.++..+|++++|+..+++
T Consensus 11 ~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~ 90 (150)
T 4ga2_A 11 ADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRR 90 (150)
T ss_dssp HHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHH-HHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEI-YDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~-yd~~i~~ 125 (235)
+....|..+ ..+..+|.+++..| +++++.+. +++.+..
T Consensus 91 al~~~p~~~-----~~~~~la~~~~~~~-~~~~aa~~~~~~al~l 129 (150)
T 4ga2_A 91 SVELNPTQK-----DLVLKIAELLCKND-VTDGRAKYWVERAAKL 129 (150)
T ss_dssp HHHHCTTCH-----HHHHHHHHHHHHHC-SSSSHHHHHHHHHHHH
T ss_pred HHHhCCCCH-----HHHHHHHHHHHHcC-ChHHHHHHHHHHHHHh
Confidence 999998753 33445999999998 88887766 4888876
No 6
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.50 E-value=4.1e-13 Score=104.15 Aligned_cols=112 Identities=13% Similarity=0.003 Sum_probs=101.1
Q ss_pred HHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc
Q 026637 9 DIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 9 ~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~ 88 (235)
..+++++..+|++...+..+|..+...|++++|+..+++++.++|+++.++..+|.++..+|++++|+..++++....|.
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 89 CSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 89 ~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.+ ..+.++|.+++..| ++++|++.|++.+...
T Consensus 85 ~~-----~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~ 116 (142)
T 2xcb_A 85 EP-----RFPFHAAECHLQLG-DLDGAESGFYSARALA 116 (142)
T ss_dssp CT-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred Cc-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHhC
Confidence 54 34557999999998 9999999999998763
No 7
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.50 E-value=3.1e-13 Score=133.59 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=112.2
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.++|+...+|++..+|+++.++..+|.++.+.|++++|++.+++||+++|+++.++.++|.++..+|++++|+..++
T Consensus 22 ~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~ 101 (723)
T 4gyw_A 22 QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYT 101 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|... ..|+ ++|.++.+.| ++++|++.|++.+..
T Consensus 102 kAl~l~P~~~---~a~~--~Lg~~~~~~g-~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 102 RAIQINPAFA---DAHS--NLASIHKDSG-NIPEAIASYRTALKL 140 (723)
T ss_dssp HHHHHCTTCH---HHHH--HHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCH---HHHH--HHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 9999987743 3444 5999999998 999999999999987
No 8
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.46 E-value=6.1e-13 Score=102.49 Aligned_cols=109 Identities=12% Similarity=0.068 Sum_probs=97.2
Q ss_pred HHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCC
Q 026637 11 IHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCS 90 (235)
Q Consensus 11 ~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~ 90 (235)
..|+...+|+.+..+...|-.+...|+|++|++.+++|++++|+++.++..+|.++..+|++++|+..+++++...|..+
T Consensus 2 ~ar~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~ 81 (126)
T 4gco_A 2 NARLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFI 81 (126)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred hhHHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhh
Confidence 35677789999999999999999999999999999999999999999999999999999999999999999999987742
Q ss_pred cchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 91 SFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 91 ~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
..+..+|.+++..| ++++|++.|++.+..
T Consensus 82 -----~a~~~lg~~~~~~~-~~~~A~~~~~~al~l 110 (126)
T 4gco_A 82 -----KGYIRKAACLVAMR-EWSKAQRAYEDALQV 110 (126)
T ss_dssp -----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
Confidence 34446999999998 999999999999987
No 9
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.45 E-value=5.7e-13 Score=122.11 Aligned_cols=119 Identities=11% Similarity=0.100 Sum_probs=111.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQ-MSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~-~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
.|+.++++...++++..+|++..++..+|.++...|+ +++|++.+++|++++|+++.+++.+|.++...|++++|+..+
T Consensus 110 ~g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~ 189 (382)
T 2h6f_A 110 DERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFI 189 (382)
T ss_dssp TCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred CCChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHH
Confidence 4889999999999999999999999999999999997 999999999999999999999999999999999999999999
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++++...|.. .+.|.+++.++...| ++++|++.|++.|..
T Consensus 190 ~kal~ldP~~-----~~a~~~lg~~~~~~g-~~~eAl~~~~~al~l 229 (382)
T 2h6f_A 190 ADILNQDAKN-----YHAWQHRQWVIQEFK-LWDNELQYVDQLLKE 229 (382)
T ss_dssp HHHHHHCTTC-----HHHHHHHHHHHHHHT-CCTTHHHHHHHHHHH
T ss_pred HHHHHhCccC-----HHHHHHHHHHHHHcC-ChHHHHHHHHHHHHh
Confidence 9999999873 477778999999998 999999999999987
No 10
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.42 E-value=3.5e-12 Score=101.32 Aligned_cols=118 Identities=13% Similarity=0.135 Sum_probs=81.2
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++....+++...|+++.++..+|..+...++++.|.+...+++.++|+++.++..+|.++..+|++++|+..+++
T Consensus 53 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 132 (184)
T 3vtx_A 53 GLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEK 132 (184)
T ss_dssp TCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 45555555555555555555555555566666666666666777777777777777777778888888888888888888
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+....|..+ ..+..+|.++...| ++++|++.|+++|..
T Consensus 133 ~l~~~p~~~-----~~~~~lg~~~~~~g-~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 133 TISIKPGFI-----RAYQSIGLAYEGKG-LRDEAVKYFKKALEK 170 (184)
T ss_dssp HHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHT
T ss_pred HHHhcchhh-----hHHHHHHHHHHHCC-CHHHHHHHHHHHHhC
Confidence 777776632 23345778887777 788888888777765
No 11
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.41 E-value=1.2e-11 Score=98.29 Aligned_cols=119 Identities=16% Similarity=0.114 Sum_probs=111.7
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.++|+...++++..+|+++.++..+|.++.+.|++++|+...++++..+|+++.+...++.++...+++++++..++
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 97 (184)
T 3vtx_A 18 KGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQ 97 (184)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+ ..+..+|.++...| ++++|++.|++.+..
T Consensus 98 ~a~~~~~~~~-----~~~~~lg~~~~~~g-~~~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 98 RAIALNTVYA-----DAYYKLGLVYDSMG-EHDKAIEAYEKTISI 136 (184)
T ss_dssp HHHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHhCccch-----HHHHHHHHHHHHhC-CchhHHHHHHHHHHh
Confidence 9999987743 34556999999998 999999999999876
No 12
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.41 E-value=1.3e-12 Score=107.92 Aligned_cols=121 Identities=13% Similarity=0.047 Sum_probs=103.3
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHH----------------HHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGI----------------LAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~----------------~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halah 64 (235)
.|++++++..+++++..+|+++.++.. +|.++...|++++|+..++++++++|+++.++..+|.
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 96 (208)
T 3urz_A 17 AGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAE 96 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 489999999999999999999998888 9999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhccCCcchhHHH---------------------------------HHHHHHHHHhCCCC
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHN---------------------------------WWHVALCYLEGHSP 111 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~---------------------------------~WHlAL~~le~G~~ 111 (235)
++..+|++++|+..++++....|..+. .++ ++..++.++..| +
T Consensus 97 ~~~~~g~~~~A~~~~~~al~~~P~~~~---a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~-~ 172 (208)
T 3urz_A 97 MQVCRGQEKDALRMYEKILQLEADNLA---ANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTT-R 172 (208)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTCHH---HHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHcCCHHHHHHHHHHHHHcCCCCHH---HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHcc-C
Confidence 999999999999999999999887431 121 233455555555 7
Q ss_pred HHHHHHHHHhhchh
Q 026637 112 MRKVLEIYDNHIWK 125 (235)
Q Consensus 112 ~deAl~~yd~~i~~ 125 (235)
|++|+..|++.|..
T Consensus 173 ~~~A~~~~~~al~l 186 (208)
T 3urz_A 173 YEKARNSLQKVILR 186 (208)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888888765
No 13
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.41 E-value=7.9e-12 Score=114.51 Aligned_cols=120 Identities=8% Similarity=0.005 Sum_probs=109.4
Q ss_pred CCC-hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 1 MGR-PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 1 ~G~-~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
+|+ .++++..+++++..+|+++.++..+|.++...|++++|++.+++||+++|+++.++..+|.++...|++++++..+
T Consensus 144 ~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~ 223 (382)
T 2h6f_A 144 LQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYV 223 (382)
T ss_dssp TTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred cccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHH
Confidence 476 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHH-----HHHHHhhchh
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKV-----LEIYDNHIWK 125 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deA-----l~~yd~~i~~ 125 (235)
++++...|+.+ ..|.+++.++..++|.+++| ++.|++.|..
T Consensus 224 ~~al~l~P~~~-----~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l 269 (382)
T 2h6f_A 224 DQLLKEDVRNN-----SVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKL 269 (382)
T ss_dssp HHHHHHCTTCH-----HHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCH-----HHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 99999998843 45567999998844365787 5899999987
No 14
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.39 E-value=1.6e-12 Score=128.47 Aligned_cols=119 Identities=10% Similarity=0.064 Sum_probs=111.3
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.++|+...++++..+|+++.++..+|.++.+.|++++|++.+++|++++|+++.++.++|.++..+|++++|+..++
T Consensus 56 ~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~ 135 (723)
T 4gyw_A 56 QGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYR 135 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|+.+ ..+.++|.++...| ++++|.+.|++.+..
T Consensus 136 ~Al~l~P~~~-----~a~~~L~~~l~~~g-~~~~A~~~~~kal~l 174 (723)
T 4gyw_A 136 TALKLKPDFP-----DAYCNLAHCLQIVC-DWTDYDERMKKLVSI 174 (723)
T ss_dssp HHHHHCSCCH-----HHHHHHHHHHHHTT-CCTTHHHHHHHHHHH
T ss_pred HHHHhCCCCh-----HHHhhhhhHHHhcc-cHHHHHHHHHHHHHh
Confidence 9999998743 34456999999998 999999999888764
No 15
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.39 E-value=9.6e-12 Score=91.05 Aligned_cols=118 Identities=14% Similarity=0.233 Sum_probs=108.6
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++...++++...|+++..+..+|..+...|++++|++..++++.++|+++.++..++.++...|++++|+..+++
T Consensus 15 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 94 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQK 94 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.....|..+ ..+..+|.++...| ++++|+..|++.+..
T Consensus 95 ~~~~~~~~~-----~~~~~la~~~~~~~-~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 95 ALELDPRSA-----EAWYNLGNAYYKQG-DYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHCTTCH-----HHHHHHHHHHHTTT-CHHHHHHHHHHHHHH
T ss_pred HHHhCCCCh-----HHHHHHHHHHHHHc-cHHHHHHHHHHHHcc
Confidence 998876632 34556999999998 999999999988765
No 16
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.39 E-value=6.5e-12 Score=99.59 Aligned_cols=118 Identities=12% Similarity=0.084 Sum_probs=106.8
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCCH--HHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHV-LQHDCCF--KEAVQF 78 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahv-l~~~Gr~--~egi~~ 78 (235)
|+.++++..+++++..+|+++.++..+|..+...|++++|+..++++++++|+++.++..+|.+ +...|++ ++|+..
T Consensus 24 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~ 103 (177)
T 2e2e_A 24 QNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAM 103 (177)
T ss_dssp ---CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 6788899999999999999999999999999999999999999999999999999999999999 7799998 999999
Q ss_pred HHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 79 MEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 79 l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++++....|..+ ..+..+|.+++..| ++++|+..|++.+..
T Consensus 104 ~~~al~~~p~~~-----~~~~~la~~~~~~g-~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 104 IDKALALDSNEI-----TALMLLASDAFMQA-NYAQAIELWQKVMDL 144 (177)
T ss_dssp HHHHHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHT
T ss_pred HHHHHHhCCCcH-----HHHHHHHHHHHHcc-cHHHHHHHHHHHHhh
Confidence 999999987742 34556999999998 999999999999876
No 17
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.38 E-value=5e-12 Score=97.48 Aligned_cols=121 Identities=8% Similarity=0.003 Sum_probs=107.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++...++++...|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++|+..++
T Consensus 26 ~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 105 (166)
T 1a17_A 26 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 105 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+ ..+.....+..++..| ++++|++.|.+....
T Consensus 106 ~a~~~~p~~~---~~~~~~~~~~~~~~~~-~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 106 TVVKVKPHDK---DAKMKYQECNKIVKQK-AFERAIAGDEHKRSV 146 (166)
T ss_dssp HHHHHSTTCH---HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCH---HHHHHHHHHHHHHHHH-HHHHHHHcccchHHH
Confidence 9999987743 2344445665688887 999999999875543
No 18
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.38 E-value=5.6e-12 Score=103.71 Aligned_cols=124 Identities=10% Similarity=0.025 Sum_probs=111.6
Q ss_pred CCChhhHHHHHHhhcCCCC-CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQ-QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p-~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
.|+.++++...++++...| .++.++..+|.++...|++++|++.+++++.++|+++.++..+|.++..+|++++|+..+
T Consensus 20 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 99 (228)
T 4i17_A 20 AKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATL 99 (228)
T ss_dssp TTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHH
Confidence 4899999999999999998 888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHchhhhccCCcch--hHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 80 EECSSTWSSCSSFM--YTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 80 ~~a~~~w~~~~~~l--~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+++....|..+.+. ....+..+|.+++..| ++++|++.|++.+..
T Consensus 100 ~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~A~~~~~~al~~ 146 (228)
T 4i17_A 100 TEGIKAVPGNATIEKLYAIYYLKEGQKFQQAG-NIEKAEENYKHATDV 146 (228)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHTTS
T ss_pred HHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhc-cHHHHHHHHHHHHhc
Confidence 99999988843110 0124567999999998 999999999999876
No 19
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.38 E-value=1.1e-10 Score=93.46 Aligned_cols=190 Identities=11% Similarity=0.043 Sum_probs=136.7
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-CCHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHD-CCFKEAVQFM 79 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~-Gr~~egi~~l 79 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|.+..++++.++|+++.++..++.++... |++++|+..+
T Consensus 21 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~ 100 (225)
T 2vq2_A 21 GQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYF 100 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCccccccc
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGN 159 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~~g~ 159 (235)
++... .|..|.. ...+..+|.++...| ++++|+..|++.+... +. ....+..-+.++++ .|.. ..
T Consensus 101 ~~~~~-~~~~~~~--~~~~~~l~~~~~~~~-~~~~A~~~~~~~~~~~--~~---~~~~~~~la~~~~~---~~~~---~~ 165 (225)
T 2vq2_A 101 DKALA-DPTYPTP--YIANLNKGICSAKQG-QFGLAEAYLKRSLAAQ--PQ---FPPAFKELARTKML---AGQL---GD 165 (225)
T ss_dssp HHHHT-STTCSCH--HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHS--TT---CHHHHHHHHHHHHH---HTCH---HH
T ss_pred HHHHc-CcCCcch--HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhC--CC---CchHHHHHHHHHHH---cCCH---HH
Confidence 99988 3333322 345556999999998 9999999999988763 22 12222222222222 1221 11
Q ss_pred chHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHH
Q 026637 160 RLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSR 207 (235)
Q Consensus 160 rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~ 207 (235)
-.+.+-......+......+ ......+...|+.+.+...++.+...
T Consensus 166 A~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~ 211 (225)
T 2vq2_A 166 ADYYFKKYQSRVEVLQADDL--LLGWKIAKALGNAQAAYEYEAQLQAN 211 (225)
T ss_dssp HHHHHHHHHHHHCSCCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCHHHH--HHHHHHHHhcCcHHHHHHHHHHHHHh
Confidence 12222222221120222122 22344456788888888888887654
No 20
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.37 E-value=1.2e-11 Score=95.79 Aligned_cols=118 Identities=13% Similarity=0.065 Sum_probs=61.9
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..+++++...|+++.++..+|..+...|++++|++..++++.++|+++.++..+|.++...|++++|+..+++
T Consensus 56 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 135 (186)
T 3as5_A 56 GAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKI 135 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHH
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+....|.. ...+..+|.++...| ++++|++.|++.+..
T Consensus 136 ~~~~~~~~-----~~~~~~la~~~~~~~-~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 136 ALGLRPNE-----GKVHRAIAFSYEQMG-RHEEALPHFKKANEL 173 (186)
T ss_dssp HHHHCTTC-----HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHhcCccc-----hHHHHHHHHHHHHcC-CHHHHHHHHHHHHHc
Confidence 55544332 123333555555554 555555555555443
No 21
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.35 E-value=1.7e-10 Score=95.06 Aligned_cols=188 Identities=14% Similarity=0.056 Sum_probs=136.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|..+...|++++|++.++++++++|+++.++..++.++..+|++++|+..++
T Consensus 50 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 129 (252)
T 2ho1_A 50 RGNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLL 129 (252)
T ss_dssp TTCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCcccccccc
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNR 160 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~~g~r 160 (235)
++.. .+..|.. ...+..+|.+++..| ++++|++.|++.+... +. ....+..-+.++.+ .| +
T Consensus 130 ~~~~-~~~~~~~--~~~~~~la~~~~~~g-~~~~A~~~~~~~~~~~--~~---~~~~~~~la~~~~~---~g-------~ 190 (252)
T 2ho1_A 130 EASQ-DTLYPER--SRVFENLGLVSLQMK-KPAQAKEYFEKSLRLN--RN---QPSVALEMADLLYK---ER-------E 190 (252)
T ss_dssp HHTT-CTTCTTH--HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHC--SC---CHHHHHHHHHHHHH---TT-------C
T ss_pred HHHh-CccCccc--HHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcC--cc---cHHHHHHHHHHHHH---cC-------C
Confidence 9988 2222222 235556999999998 9999999999988763 21 12222222222211 12 2
Q ss_pred hHHHHHHHHhhhcchhcchhhHHH--HHHHhcCCCchHHHHHHHHHHHHh
Q 026637 161 LKVLADCVADQANWYLECHLDLLI--LWALANTGEVSKAEDLLKGLKSRH 208 (235)
Q Consensus 161 w~~la~~~~~~~~~~~~~F~d~H~--~~al~~ag~~~~~~~ll~~~~~~~ 208 (235)
++.-...+..-..... ...+.+. ...+...|+.+.+.+.++.+....
T Consensus 191 ~~~A~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~ 239 (252)
T 2ho1_A 191 YVPARQYYDLFAQGGG-QNARSLLLGIRLAKVFEDRDTAASYGLQLKRLY 239 (252)
T ss_dssp HHHHHHHHHHHHTTSC-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCc-CcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC
Confidence 3333333332111100 1122333 445567888888888888776653
No 22
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.34 E-value=4.7e-11 Score=100.47 Aligned_cols=122 Identities=11% Similarity=0.053 Sum_probs=109.5
Q ss_pred CCChhhHHHHHHhhcCCCCCC---hhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHH------
Q 026637 1 MGRPDLCFDIIHQVLPYNQQE---DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD---CWSQHALCHVLQH------ 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~---~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d---awA~halahvl~~------ 68 (235)
.|++++|....++++..+|++ +.++..+|.++...|++++|+..+++++.++|++ +.++..+|.++..
T Consensus 28 ~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~ 107 (261)
T 3qky_A 28 QGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE 107 (261)
T ss_dssp TTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred hCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc
Confidence 489999999999999999998 7899999999999999999999999999998865 6789999999999
Q ss_pred --cCCHHHHHHHHHHchhhhccCCcchhHHHH--------------HHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 69 --DCCFKEAVQFMEECSSTWSSCSSFMYTHNW--------------WHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 69 --~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~--------------WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+|++++|+..+++.....|..+.. .... +.+|.+++..| ++++|+..|++.+..
T Consensus 108 ~~~~~~~~A~~~~~~~l~~~p~~~~~--~~a~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 108 LDQTDTRKAIEAFQLFIDRYPNHELV--DDATQKIRELRAKLARKQYEAARLYERRE-LYEAAAVTYEAVFDA 177 (261)
T ss_dssp SCCHHHHHHHHHHHHHHHHCTTCTTH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHCcCchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHH
Confidence 999999999999999999885522 1111 57899999998 999999999999876
No 23
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.34 E-value=3.3e-11 Score=93.29 Aligned_cols=118 Identities=9% Similarity=0.056 Sum_probs=109.7
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..+++++...|+++.++..+|..+...|++++|....+++++++|+++.++..++.++...|++++|+..+++
T Consensus 22 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 101 (186)
T 3as5_A 22 GRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIK 101 (186)
T ss_dssp TCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.....|..+ ..+..+|.++...| ++++|+..|.+.+..
T Consensus 102 ~~~~~~~~~-----~~~~~~a~~~~~~~-~~~~A~~~~~~~~~~ 139 (186)
T 3as5_A 102 VAEANPINF-----NVRFRLGVALDNLG-RFDEAIDSFKIALGL 139 (186)
T ss_dssp HHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHhcCcHhH-----HHHHHHHHHHHHcC-cHHHHHHHHHHHHhc
Confidence 999877632 34556899999998 999999999998876
No 24
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.34 E-value=3.5e-10 Score=95.79 Aligned_cols=118 Identities=11% Similarity=0.090 Sum_probs=100.3
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELG-QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g-~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
|+.++++..+++++..+|+++.++..+|..+...| ++++|++.+++++.++|+++.++..+|.++...|++++|+..++
T Consensus 70 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 149 (330)
T 3hym_B 70 NKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYF 149 (330)
T ss_dssp TCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 78888888888888888888888888999888998 89999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+ ..+..+|..+...| ++++|+..|++.+..
T Consensus 150 ~a~~~~~~~~-----~~~~~l~~~~~~~~-~~~~A~~~~~~al~~ 188 (330)
T 3hym_B 150 TAAQLMKGCH-----LPMLYIGLEYGLTN-NSKLAERFFSQALSI 188 (330)
T ss_dssp HHHHHTTTCS-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHTT
T ss_pred HHHHhccccH-----HHHHHHHHHHHHHh-hHHHHHHHHHHHHHh
Confidence 8888877643 23334888888887 899999999888765
No 25
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.33 E-value=5.7e-12 Score=101.12 Aligned_cols=88 Identities=13% Similarity=-0.061 Sum_probs=85.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++|...+++++..+|+++.++..+|.++...|+|++|++.+++|++++|+++.++..+|.++...|++++|+..++
T Consensus 49 ~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 49 KGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hchhhhcc
Q 026637 81 ECSSTWSS 88 (235)
Q Consensus 81 ~a~~~w~~ 88 (235)
++....|+
T Consensus 129 ~al~l~~~ 136 (151)
T 3gyz_A 129 LVIQHSND 136 (151)
T ss_dssp HHHHHCCC
T ss_pred HHHHhCCC
Confidence 99998766
No 26
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.33 E-value=7.8e-11 Score=103.88 Aligned_cols=119 Identities=15% Similarity=0.083 Sum_probs=73.6
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.++++...++++...|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++++..++
T Consensus 148 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 227 (388)
T 1w3b_A 148 LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYL 227 (388)
T ss_dssp TSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCTTHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 35666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+ ..+..++..+...| ++++|++.|++.+..
T Consensus 228 ~al~~~p~~~-----~~~~~l~~~~~~~g-~~~~A~~~~~~al~~ 266 (388)
T 1w3b_A 228 RALSLSPNHA-----VVHGNLACVYYEQG-LIDLAIDTYRRAIEL 266 (388)
T ss_dssp HHHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHT
T ss_pred HHHhhCcCCH-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHhh
Confidence 6666554421 22223566666665 666666666665544
No 27
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.32 E-value=1.4e-10 Score=94.39 Aligned_cols=187 Identities=12% Similarity=0.062 Sum_probs=132.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|++.++++++++|+++.++..++.++..+|++++|+..++
T Consensus 36 ~~~~~~A~~~~~~~l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 115 (243)
T 2q7f_A 36 FGDYEKAAEAFTKAIEENKEDAIPYINFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFE 115 (243)
T ss_dssp ------CCTTHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hhCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCcccccccc
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNR 160 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~~g~r 160 (235)
+.....|..+ ..+..+|.+++..| ++++|+..|++.+... +. ....+..-+.++.+ .|.. ..-
T Consensus 116 ~~~~~~~~~~-----~~~~~~a~~~~~~~-~~~~A~~~~~~~~~~~--~~---~~~~~~~l~~~~~~---~~~~---~~A 178 (243)
T 2q7f_A 116 KALRAGMENG-----DLFYMLGTVLVKLE-QPKLALPYLQRAVELN--EN---DTEARFQFGMCLAN---EGML---DEA 178 (243)
T ss_dssp HHHHHTCCSH-----HHHHHHHHHHHHTS-CHHHHHHHHHHHHHHC--TT---CHHHHHHHHHHHHH---HTCC---HHH
T ss_pred HHHHhCCCCH-----HHHHHHHHHHHHhc-cHHHHHHHHHHHHHhC--Cc---cHHHHHHHHHHHHH---cCCH---HHH
Confidence 9999887743 34556999999998 9999999999988763 22 12222222222221 2221 111
Q ss_pred hHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHH
Q 026637 161 LKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSR 207 (235)
Q Consensus 161 w~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~ 207 (235)
.+.+-......+ ... ..-.....++...|+.+.+.+.++..-..
T Consensus 179 ~~~~~~~~~~~~-~~~--~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 179 LSQFAAVTEQDP-GHA--DAFYNAGVTYAYKENREKALEMLDKAIDI 222 (243)
T ss_dssp HHHHHHHHHHCT-TCH--HHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCc-ccH--HHHHHHHHHHHHccCHHHHHHHHHHHHcc
Confidence 222222222111 111 12233455667789988888877766554
No 28
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.32 E-value=1.7e-10 Score=100.71 Aligned_cols=88 Identities=10% Similarity=0.076 Sum_probs=83.4
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++..+|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++..+|++++|+..++
T Consensus 78 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 157 (365)
T 4eqf_A 78 EGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALK 157 (365)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hchhhhcc
Q 026637 81 ECSSTWSS 88 (235)
Q Consensus 81 ~a~~~w~~ 88 (235)
++....|.
T Consensus 158 ~al~~~p~ 165 (365)
T 4eqf_A 158 NWIKQNPK 165 (365)
T ss_dssp HHHHHCHH
T ss_pred HHHHhCcc
Confidence 99877655
No 29
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.31 E-value=4.6e-10 Score=97.13 Aligned_cols=124 Identities=9% Similarity=0.048 Sum_probs=108.3
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++|+..++
T Consensus 77 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 156 (368)
T 1fch_A 77 EGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILR 156 (368)
T ss_dssp TTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcch----------------------------------------------hHHHHHHHHHHHHhCCCCHHH
Q 026637 81 ECSSTWSSCSSFM----------------------------------------------YTHNWWHVALCYLEGHSPMRK 114 (235)
Q Consensus 81 ~a~~~w~~~~~~l----------------------------------------------~~H~~WHlAL~~le~G~~~de 114 (235)
++....|..+... ....+..+|.++...| ++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g-~~~~ 235 (368)
T 1fch_A 157 DWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSG-EYDK 235 (368)
T ss_dssp HHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTT-CHHH
T ss_pred HHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcC-CHHH
Confidence 9887766543221 1234456888888887 8888
Q ss_pred HHHHHHhhchh
Q 026637 115 VLEIYDNHIWK 125 (235)
Q Consensus 115 Al~~yd~~i~~ 125 (235)
|+..|++.+..
T Consensus 236 A~~~~~~al~~ 246 (368)
T 1fch_A 236 AVDCFTAALSV 246 (368)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888888776
No 30
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.31 E-value=1.3e-11 Score=94.97 Aligned_cols=89 Identities=10% Similarity=0.051 Sum_probs=86.7
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|++++|+...++++..+|.++.++..+|.++...|++++|++.+++|++++|+++.++..+|.++..+|++++|+..++
T Consensus 26 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~ 105 (126)
T 4gco_A 26 KGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYE 105 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccC
Q 026637 81 ECSSTWSSC 89 (235)
Q Consensus 81 ~a~~~w~~~ 89 (235)
++....|+.
T Consensus 106 ~al~l~P~~ 114 (126)
T 4gco_A 106 DALQVDPSN 114 (126)
T ss_dssp HHHHHCTTC
T ss_pred HHHHHCcCC
Confidence 999999874
No 31
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.31 E-value=3.2e-10 Score=96.05 Aligned_cols=120 Identities=9% Similarity=-0.020 Sum_probs=111.0
Q ss_pred CC-ChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 1 MG-RPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 1 ~G-~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
.| +.++++..+++++..+|.++.++..+|..+...|++++|++.++++++++|++..++..+|.++...|++++|+..+
T Consensus 103 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 182 (330)
T 3hym_B 103 VGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFF 182 (330)
T ss_dssp SCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 36 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+++....|..+ ..+..+|.+++..| ++++|+..|++.+...
T Consensus 183 ~~al~~~~~~~-----~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~ 223 (330)
T 3hym_B 183 SQALSIAPEDP-----FVMHEVGVVAFQNG-EWKTAEKWFLDALEKI 223 (330)
T ss_dssp HHHHTTCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCh-----HHHHHHHHHHHHcc-cHHHHHHHHHHHHHHh
Confidence 99999987742 34446999999998 9999999999998863
No 32
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.31 E-value=1.6e-10 Score=101.97 Aligned_cols=117 Identities=15% Similarity=-0.015 Sum_probs=61.6
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.+++....++++..+|.++.++..+|.++...|++++|++.++++++++|+++.++..++.++...|++++|+..+++
T Consensus 47 ~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 126 (388)
T 1w3b_A 47 RRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVS 126 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhch
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIW 124 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~ 124 (235)
+....|... ..+..++.++...| ++++|++.|++.+.
T Consensus 127 al~~~p~~~-----~~~~~l~~~~~~~g-~~~~A~~~~~~al~ 163 (388)
T 1w3b_A 127 ALQYNPDLY-----CVRSDLGNLLKALG-RLEEAKACYLKAIE 163 (388)
T ss_dssp HHHHCTTCT-----HHHHHHHHHHHTTS-CHHHHHHHHHHHHH
T ss_pred HHHhCCCcH-----HHHHHHHHHHHHcc-CHHHHHHHHHHHHH
Confidence 555444321 11222444444444 45555555544443
No 33
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.31 E-value=1.1e-11 Score=108.27 Aligned_cols=120 Identities=11% Similarity=0.052 Sum_probs=111.2
Q ss_pred CCChhhHHHHHHhhcCCCCC--ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQ--EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQF 78 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~--~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~ 78 (235)
.|+.++++...++++...|+ ++.++..+|.++...|++++|++.++++++++|+++.++..+|.++..+|++++|+..
T Consensus 190 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 269 (365)
T 4eqf_A 190 SSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEA 269 (365)
T ss_dssp CHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 46789999999999999999 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 79 MEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 79 l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
++++....|.. ...+..+|.++...| ++++|+..|++.+...
T Consensus 270 ~~~al~~~p~~-----~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~ 311 (365)
T 4eqf_A 270 YTRALEIQPGF-----IRSRYNLGISCINLG-AYREAVSNFLTALSLQ 311 (365)
T ss_dssp HHHHHHHCTTC-----HHHHHHHHHHHHHHT-CCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCc-----hHHHHHHHHHHHHCC-CHHHHHHHHHHHHHhC
Confidence 99999998774 245556999999998 9999999999998874
No 34
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.30 E-value=3e-11 Score=90.71 Aligned_cols=101 Identities=13% Similarity=0.021 Sum_probs=91.3
Q ss_pred CCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHH
Q 026637 19 QQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNW 98 (235)
Q Consensus 19 p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~ 98 (235)
|..+..+...|..+...|+|++|++.++++++++|+++.++..+|.++..+|++++|+..++++....|..+ ..+
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~ 75 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV-----RAY 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH-----HHH
Confidence 345667888999999999999999999999999999999999999999999999999999999999987742 345
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 99 WHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 99 WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
..+|.+++..| ++++|+..|++.+..
T Consensus 76 ~~lg~~~~~~~-~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 76 IRKATAQIAVK-EYASALETLDAARTK 101 (126)
T ss_dssp HHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-CHHHHHHHHHHHHHh
Confidence 56999999998 999999999998876
No 35
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.30 E-value=2.1e-11 Score=100.21 Aligned_cols=119 Identities=7% Similarity=0.026 Sum_probs=108.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHHHHcCCHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC-------WSQHALCHVLQHDCCFK 73 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da-------wA~halahvl~~~Gr~~ 73 (235)
+|+.++++..+++++..+|+++.++..+|.++...|++++|++..+++++++|+++ .++..+|.++..+|+++
T Consensus 55 ~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 134 (228)
T 4i17_A 55 IKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIE 134 (228)
T ss_dssp TTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHH
Confidence 58999999999999999999999999999999999999999999999999999999 77999999999999999
Q ss_pred HHHHHHHHchhhhcc--CCcchhHHHHHHHHHHHHhCCCCH---------------------------HHHHHHHHhhch
Q 026637 74 EAVQFMEECSSTWSS--CSSFMYTHNWWHVALCYLEGHSPM---------------------------RKVLEIYDNHIW 124 (235)
Q Consensus 74 egi~~l~~a~~~w~~--~~~~l~~H~~WHlAL~~le~G~~~---------------------------deAl~~yd~~i~ 124 (235)
+|+..++++....|. .+ ..+..+|.+++..| +. ++|+..|++.+.
T Consensus 135 ~A~~~~~~al~~~p~~~~~-----~~~~~l~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~ 208 (228)
T 4i17_A 135 KAEENYKHATDVTSKKWKT-----DALYSLGVLFYNNG-ADVLRKATPLASSNKEKYASEKAKADAAFKKAVDYLGEAVT 208 (228)
T ss_dssp HHHHHHHHHTTSSCHHHHH-----HHHHHHHHHHHHHH-HHHHHHHGGGTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcccH-----HHHHHHHHHHHHHH-HHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999998765 32 34446899998887 77 889999998887
Q ss_pred h
Q 026637 125 K 125 (235)
Q Consensus 125 ~ 125 (235)
.
T Consensus 209 l 209 (228)
T 4i17_A 209 L 209 (228)
T ss_dssp H
T ss_pred c
Confidence 6
No 36
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.30 E-value=3.1e-11 Score=92.69 Aligned_cols=105 Identities=10% Similarity=0.081 Sum_probs=91.8
Q ss_pred CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcc--hhHHH
Q 026637 20 QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSF--MYTHN 97 (235)
Q Consensus 20 ~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~--l~~H~ 97 (235)
+.+.++..+|..+...|+|++|++.+++|++++|+++.++.++|.++..+|++++|+..+++++...|..+.. ..+..
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHH
Confidence 4456778899999999999999999999999999999999999999999999999999999999888775432 12235
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 98 WWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 98 ~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+..+|.++...| ++++|++.|.+.+..
T Consensus 86 ~~~lg~~~~~~~-~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 86 MSRAGNAFQKQN-DLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHhh
Confidence 566999999998 999999999999875
No 37
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.29 E-value=9.6e-11 Score=94.65 Aligned_cols=121 Identities=13% Similarity=0.060 Sum_probs=106.4
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++...+++++ .++.++..+|.++...|++++|++.++++++++|+++.++..+|.++..+|++++|+..++
T Consensus 19 ~~~~~~A~~~~~~a~~---~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 95 (213)
T 1hh8_A 19 KKDWKGALDAFSAVQD---PHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLK 95 (213)
T ss_dssp TTCHHHHHHHHHTSSS---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHcC---CChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHH
Confidence 4899999999999973 3788999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCc-----------chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSS-----------FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~-----------~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+. ......+..+|.++...| ++++|++.|++.+..
T Consensus 96 ~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 96 EALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKE-EWKKAEEQLALATSM 150 (213)
T ss_dssp HHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHTT
T ss_pred HHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHcc-CHHHHHHHHHHHHHc
Confidence 99997766330 001235556999999998 999999999999876
No 38
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.29 E-value=5e-11 Score=112.08 Aligned_cols=118 Identities=13% Similarity=0.050 Sum_probs=79.4
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..+++++..+|+++.++..+|..+...|++++|++.+++|++++|+++.++..+|.++..+|++++|+..+++
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 82 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQ 82 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 67778888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+....|..+ ..+..+|.+++..| ++++|++.|++.+..
T Consensus 83 al~~~p~~~-----~~~~~la~~~~~~g-~~~~A~~~~~~al~~ 120 (568)
T 2vsy_A 83 ASDAAPEHP-----GIALWLGHALEDAG-QAEAAAAAYTRAHQL 120 (568)
T ss_dssp HHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHhcCCCCH-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 888776632 23335788888887 788888888887766
No 39
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.29 E-value=1e-11 Score=94.82 Aligned_cols=95 Identities=11% Similarity=-0.061 Sum_probs=84.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHH
Q 026637 25 FGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALC 104 (235)
Q Consensus 25 ~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~ 104 (235)
+..+|..+.+.|++++|+..++++++++|+++.++..+|.++...|++++|+..++++....|..+ -.+..+|.+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~-----~~~~~la~~ 94 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDI-----AVHAALAVS 94 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHH
Confidence 456778899999999999999999999999999999999999999999999999999999988743 344569999
Q ss_pred HHhCCCCHHHHHHHHHhhchh
Q 026637 105 YLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 105 ~le~G~~~deAl~~yd~~i~~ 125 (235)
+...| ++++|++.|++.+..
T Consensus 95 ~~~~g-~~~~A~~~~~~al~~ 114 (121)
T 1hxi_A 95 HTNEH-NANAALASLRAWLLS 114 (121)
T ss_dssp HHHHH-HHHHHHHHHHHHHC-
T ss_pred HHHcC-CHHHHHHHHHHHHHh
Confidence 99998 999999999998753
No 40
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.29 E-value=3.6e-11 Score=97.94 Aligned_cols=118 Identities=16% Similarity=0.187 Sum_probs=62.0
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..+++++...|.++.++..+|..+...|++++|+...+++++++|+++.+...+|.++...|++++|+..+++
T Consensus 105 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 184 (243)
T 2q7f_A 105 EMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAA 184 (243)
T ss_dssp TCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+....|..+ ..+..+|.++...| ++++|+..|++.+..
T Consensus 185 ~~~~~~~~~-----~~~~~la~~~~~~~-~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 185 VTEQDPGHA-----DAFYNAGVTYAYKE-NREKALEMLDKAIDI 222 (243)
T ss_dssp HHHHCTTCH-----HHHHHHHHHHHHTT-CTTHHHHHHHHHHHH
T ss_pred HHHhCcccH-----HHHHHHHHHHHHcc-CHHHHHHHHHHHHcc
Confidence 555443321 22333555555554 555555555555443
No 41
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.28 E-value=1.6e-09 Score=92.28 Aligned_cols=191 Identities=7% Similarity=-0.041 Sum_probs=137.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|++..+++++++|+++.++..+|.++...|++++++..++
T Consensus 133 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 212 (359)
T 3ieg_A 133 GADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSDNTEAFYKISTLYYQLGDHELSLSEVR 212 (359)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHH----------HHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHh
Q 026637 81 ECSSTWSSCSSFMYTHNW----------WHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYV 150 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~----------WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l 150 (235)
++....|..+. .+.+ +.+|..++..| ++++|+..|++.+... ++. ......+...+-....
T Consensus 213 ~a~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~~~~~--~~~---~~~~~~~~~~la~~~~ 283 (359)
T 3ieg_A 213 ECLKLDQDHKR---CFAHYKQVKKLNKLIESAEELIRDG-RYTDATSKYESVMKTE--PSV---AEYTVRSKERICHCFS 283 (359)
T ss_dssp HHHHHCTTCHH---HHHHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHC--CSS---HHHHHHHHHHHHHHHH
T ss_pred HHHhhCccchH---HHHHHHHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhcC--CCc---hHHHHHHHHHHHHHHH
Confidence 99999877542 2222 23488899998 9999999999998863 221 2122222222222222
Q ss_pred cCcccccccchHHHHHHHHhhhc-chhcchhhHHHHHHHhcCCCchHHHHHHHHHHH
Q 026637 151 RGELDVFGNRLKVLADCVADQAN-WYLECHLDLLILWALANTGEVSKAEDLLKGLKS 206 (235)
Q Consensus 151 ~G~~~~~g~rw~~la~~~~~~~~-~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~ 206 (235)
.- .+++.-...+..-.. .+..+..=.....++...|+.+.+.+.++..-+
T Consensus 284 ~~------~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~ 334 (359)
T 3ieg_A 284 KD------EKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQE 334 (359)
T ss_dssp HT------TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred Hc------cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 11 123333333222111 122122233446667788888877777665544
No 42
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.28 E-value=4.5e-11 Score=97.76 Aligned_cols=116 Identities=12% Similarity=0.016 Sum_probs=100.9
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
++++..+++++..+|.++.++..+|..+...|++++|++..+++++++|+++.++..+|.++...|++++|+..++++..
T Consensus 122 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 122 EKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 33444444444488889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 85 TWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 85 ~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
..|..+ ..+..+|.++...| ++++|+..|++.+...
T Consensus 202 ~~~~~~-----~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 202 KDPNFV-----RAYIRKATAQIAVK-EYASALETLDAARTKD 237 (258)
T ss_dssp HCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred hCHHHH-----HHHHHHHHHHHHHh-hHHHHHHHHHHHHHhC
Confidence 987742 34556999999998 9999999999988763
No 43
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.27 E-value=5.6e-11 Score=93.58 Aligned_cols=103 Identities=13% Similarity=0.062 Sum_probs=93.3
Q ss_pred CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHH
Q 026637 18 NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHN 97 (235)
Q Consensus 18 ~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~ 97 (235)
.+.++..+..+|..+...|+|++|++.++++++++|+++.++..+|.++..+|++++|+..++++....|.. ...
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-----~~~ 81 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY-----SKA 81 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-----HHH
Confidence 456778899999999999999999999999999999999999999999999999999999999999998774 245
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 98 WWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 98 ~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+..+|.+++..| ++++|+..|++.+...
T Consensus 82 ~~~lg~~~~~~g-~~~~A~~~~~~al~~~ 109 (164)
T 3sz7_A 82 WSRLGLARFDMA-DYKGAKEAYEKGIEAE 109 (164)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcc-CHHHHHHHHHHHHHhC
Confidence 556999999998 9999999999999874
No 44
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.27 E-value=7.8e-12 Score=121.71 Aligned_cols=118 Identities=12% Similarity=-0.045 Sum_probs=110.4
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.++|+..+++++..+|+++.++..+|.++...|++++|++.+++|++++|+++.++.++|.++..+|++++ +..++
T Consensus 446 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~ 524 (681)
T 2pzi_A 446 LGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQ 524 (681)
T ss_dssp HTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHH
T ss_pred cCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+ ..+.++|.+++..| ++++|++.|++.+..
T Consensus 525 ~al~~~P~~~-----~a~~~lg~~~~~~g-~~~~A~~~~~~al~l 563 (681)
T 2pzi_A 525 TVWSTNDGVI-----SAAFGLARARSAEG-DRVGAVRTLDEVPPT 563 (681)
T ss_dssp HHHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHTSCTT
T ss_pred HHHHhCCchH-----HHHHHHHHHHHHcC-CHHHHHHHHHhhccc
Confidence 9999988743 24446999999998 999999999999876
No 45
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.27 E-value=3.6e-11 Score=99.76 Aligned_cols=118 Identities=10% Similarity=-0.007 Sum_probs=93.6
Q ss_pred CChhhHHHHHHhhcCCC----CCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYN----QQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQ 77 (235)
Q Consensus 2 G~~~~al~~~~ral~~~----p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~ 77 (235)
|+.++++..+++++... |.++.++..+|..+...|++++|++.++++++++|+++.++..+|.++...|++++|+.
T Consensus 19 ~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~ 98 (275)
T 1xnf_A 19 LQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYE 98 (275)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred chHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHH
Confidence 56777888888888763 45667888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 78 FMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 78 ~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.++++....|..+ ..+..+|.+++..| ++++|+..|++.+..
T Consensus 99 ~~~~al~~~~~~~-----~~~~~la~~~~~~g-~~~~A~~~~~~a~~~ 140 (275)
T 1xnf_A 99 AFDSVLELDPTYN-----YAHLNRGIALYYGG-RDKLAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHCTTCT-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccc-----HHHHHHHHHHHHhc-cHHHHHHHHHHHHHh
Confidence 8888888776643 34445888888887 888888888888765
No 46
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.27 E-value=2.8e-11 Score=95.48 Aligned_cols=90 Identities=11% Similarity=0.021 Sum_probs=87.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+++++...+++++..+|+++.++..+|.++...|++++|++.+++|++++|+++.++..+|.++...|++++|+..++
T Consensus 34 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 113 (148)
T 2vgx_A 34 SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLF 113 (148)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCC
Q 026637 81 ECSSTWSSCS 90 (235)
Q Consensus 81 ~a~~~w~~~~ 90 (235)
++....|..|
T Consensus 114 ~al~~~p~~~ 123 (148)
T 2vgx_A 114 LAQELIANXP 123 (148)
T ss_dssp HHHHHHTTCG
T ss_pred HHHHHCcCCC
Confidence 9999988755
No 47
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.26 E-value=2.7e-11 Score=93.76 Aligned_cols=90 Identities=11% Similarity=-0.019 Sum_probs=87.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|++++++..+++++..+|+++.++..+|.++...|++++|+..+++|++++|+++.++..+|.++...|++++|+..++
T Consensus 31 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 31 AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCC
Q 026637 81 ECSSTWSSCS 90 (235)
Q Consensus 81 ~a~~~w~~~~ 90 (235)
++....|..+
T Consensus 111 ~al~~~p~~~ 120 (142)
T 2xcb_A 111 SARALAAAQP 120 (142)
T ss_dssp HHHHHHHTCG
T ss_pred HHHHhCCCCc
Confidence 9999998754
No 48
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.26 E-value=1.4e-09 Score=90.37 Aligned_cols=191 Identities=13% Similarity=0.035 Sum_probs=110.6
Q ss_pred CCChhhHHHHHHhhcCCCCCCh----hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED----FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAV 76 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~----~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi 76 (235)
+|+.++++..+++++. .|+++ .++..+|..+...|++++|++..+++++++|+++.++..+|.++..+|++++|+
T Consensus 50 ~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 128 (272)
T 3u4t_A 50 LAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAI 128 (272)
T ss_dssp TTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHH
T ss_pred HhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHH
Confidence 4677777777777777 33333 236777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHchhhhccCCcchhHHHHHHHH-HHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCccc
Q 026637 77 QFMEECSSTWSSCSSFMYTHNWWHVA-LCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELD 155 (235)
Q Consensus 77 ~~l~~a~~~w~~~~~~l~~H~~WHlA-L~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~ 155 (235)
..++++....|..+ ..+..+| .++.. + ++++|++.|++.+... ++ ....+..-+.++..+ |...
T Consensus 129 ~~~~~al~~~~~~~-----~~~~~l~~~~~~~-~-~~~~A~~~~~~a~~~~--p~---~~~~~~~~~~~~~~~---~~~~ 193 (272)
T 3u4t_A 129 QYMEKQIRPTTTDP-----KVFYELGQAYYYN-K-EYVKADSSFVKVLELK--PN---IYIGYLWRARANAAQ---DPDT 193 (272)
T ss_dssp HHHGGGCCSSCCCH-----HHHHHHHHHHHHT-T-CHHHHHHHHHHHHHHS--TT---CHHHHHHHHHHHHHH---STTC
T ss_pred HHHHHHhhcCCCcH-----HHHHHHHHHHHHH-H-HHHHHHHHHHHHHHhC--cc---chHHHHHHHHHHHHc---Ccch
Confidence 77777777755532 3344577 55543 4 6777777777777652 21 122222222222222 3210
Q ss_pred cc---ccchHHHHHHHHhhhcchhcchhhHHH--HHHHhcCCCchHHHHHHHHHHHH
Q 026637 156 VF---GNRLKVLADCVADQANWYLECHLDLLI--LWALANTGEVSKAEDLLKGLKSR 207 (235)
Q Consensus 156 ~~---g~rw~~la~~~~~~~~~~~~~F~d~H~--~~al~~ag~~~~~~~ll~~~~~~ 207 (235)
.. -..++...+.....++.......+++. ...+...|+.+.+.+.++..-..
T Consensus 194 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~ 250 (272)
T 3u4t_A 194 KQGLAKPYYEKLIEVCAPGGAKYKDELIEANEYIAYYYTINRDKVKADAAWKNILAL 250 (272)
T ss_dssp SSCTTHHHHHHHHHHHGGGGGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 01 124444444443222211111223443 44456678888777766655543
No 49
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.26 E-value=7.1e-11 Score=111.06 Aligned_cols=120 Identities=8% Similarity=-0.100 Sum_probs=112.0
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++|+...++++..+|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++..+|++++|+..++
T Consensus 36 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 115 (568)
T 2vsy_A 36 MGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYT 115 (568)
T ss_dssp HTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhC---CCCHHHHHHHHHhhchhh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEG---HSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~---G~~~deAl~~yd~~i~~~ 126 (235)
++....|..+ ..+..++.++... | ++++|++.|++.+...
T Consensus 116 ~al~~~p~~~-----~~~~~l~~~~~~~~~~g-~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 116 RAHQLLPEEP-----YITAQLLNWRRRLCDWR-ALDVLSAQVRAAVAQG 158 (568)
T ss_dssp HHHHHCTTCH-----HHHHHHHHHHHHTTCCT-THHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCH-----HHHHHHHHHHHHhhccc-cHHHHHHHHHHHHhcC
Confidence 9999987742 3455699999999 8 9999999999998874
No 50
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.26 E-value=1.4e-10 Score=95.65 Aligned_cols=118 Identities=10% Similarity=0.028 Sum_probs=62.8
Q ss_pred CChhhHHHHHHhhcC--CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLP--YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 2 G~~~~al~~~~ral~--~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
|+.++++..+++++. ..|.++.++..+|.++...|++++|++.++++++++|+++.++..++.++..+|++++|+..+
T Consensus 119 g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 198 (252)
T 2ho1_A 119 KRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYY 198 (252)
T ss_dssp TCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 455555555555555 445555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++.....|.. ...++.++.++...| ++++|++.|++.+..
T Consensus 199 ~~~~~~~~~~-----~~~~~~~~~~~~~~g-~~~~A~~~~~~~~~~ 238 (252)
T 2ho1_A 199 DLFAQGGGQN-----ARSLLLGIRLAKVFE-DRDTAASYGLQLKRL 238 (252)
T ss_dssp HHHHTTSCCC-----HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHhCcCc-----HHHHHHHHHHHHHcc-CHHHHHHHHHHHHHH
Confidence 5555544332 123334555555554 555555555555443
No 51
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.26 E-value=4.9e-11 Score=87.35 Aligned_cols=102 Identities=10% Similarity=0.019 Sum_probs=73.1
Q ss_pred CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHH
Q 026637 18 NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHN 97 (235)
Q Consensus 18 ~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~ 97 (235)
.|.++..+..+|..+...|++++|+..+++++.++|+++.++..+|.++...|++++|+..++++....|.. ...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-----~~~ 82 (131)
T 2vyi_A 8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY-----SKA 82 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-----HHH
T ss_pred chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC-----HHH
Confidence 345566777777777777777777777777777777777777777777777777777777777777766553 234
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 98 WWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 98 ~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+..+|.++...| ++++|+..|++.+..
T Consensus 83 ~~~~~~~~~~~~-~~~~A~~~~~~~~~~ 109 (131)
T 2vyi_A 83 YGRMGLALSSLN-KHVEAVAYYKKALEL 109 (131)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CHHHHHHHHHHHHhc
Confidence 445777777776 777777777776653
No 52
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.25 E-value=8e-10 Score=100.51 Aligned_cols=203 Identities=10% Similarity=0.059 Sum_probs=142.0
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|++.+++++.++|+++.++..+|.++...|++++|+..++
T Consensus 289 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 368 (537)
T 3fp2_A 289 KENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFN 368 (537)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCC-chHhHhHHHHHHHHHHhcCccccccc
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAV-HPEVYLNALGLLLRVYVRGELDVFGN 159 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~-~~~~~~da~sLL~Rl~l~G~~~~~g~ 159 (235)
++....|..+ ..+..+|.++...| ++++|+..|++.+...-...... ....+..-+.++.++.-.+...--..
T Consensus 369 ~~~~~~~~~~-----~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 442 (537)
T 3fp2_A 369 ETKLKFPTLP-----EVPTFFAEILTDRG-DFDTAIKQYDIAKRLEEVQEKIHVGIGPLIGKATILARQSSQDPTQLDEE 442 (537)
T ss_dssp HHHHHCTTCT-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHCSSCSSTTHHHHHHHHHHHHHHTC----CCHH
T ss_pred HHHHhCCCCh-----HHHHHHHHHHHHhC-CHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHhhccchhhhHh
Confidence 9999987754 23445899999998 99999999999887641111100 01111222233333311100000002
Q ss_pred chHHHHHHHHhhhc-chhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 026637 160 RLKVLADCVADQAN-WYLECHLDLLILWALANTGEVSKAEDLLKGLKSRHS 209 (235)
Q Consensus 160 rw~~la~~~~~~~~-~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~~ 209 (235)
+++.-...+..-.. ++..+..-.....++...|+.+.+.+.++..-....
T Consensus 443 ~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 493 (537)
T 3fp2_A 443 KFNAAIKLLTKACELDPRSEQAKIGLAQLKLQMEKIDEAIELFEDSAILAR 493 (537)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCC
Confidence 34433333332111 222122234456778888998888888777666543
No 53
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.25 E-value=8e-10 Score=94.19 Aligned_cols=124 Identities=12% Similarity=0.058 Sum_probs=109.0
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++..+|+++.++..+|..+...|++++|+..++++++++|+++.++..+|.++...|++++|+..++
T Consensus 16 ~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 95 (359)
T 3ieg_A 16 AGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFK 95 (359)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hchhhhc---cCCcchh-------HHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWS---SCSSFMY-------THNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~---~~~~~l~-------~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....| ..+.... ...++.+|..+...| ++++|++.|++.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~~~~ 149 (359)
T 3ieg_A 96 KVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGA-DYTAAITFLDKILEV 149 (359)
T ss_dssp HHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHh
Confidence 9998877 4321100 001233488899998 999999999999876
No 54
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.25 E-value=2.4e-10 Score=111.25 Aligned_cols=118 Identities=10% Similarity=-0.028 Sum_probs=109.2
Q ss_pred CCChhhHHHHHHhhc--------CCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026637 1 MGRPDLCFDIIHQVL--------PYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCF 72 (235)
Q Consensus 1 ~G~~~~al~~~~ral--------~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~ 72 (235)
.|+.++++..+++++ ..+|++..++..+|.++.+.|++++|++.++++++++|+++.++..+|.++..+|++
T Consensus 404 ~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~ 483 (681)
T 2pzi_A 404 LSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDY 483 (681)
T ss_dssp TCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCH
T ss_pred ccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCH
Confidence 478999999999999 889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 73 KEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 73 ~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++|+..++++....|..+ ..+..+|.++...| ++++ ++.|++.+..
T Consensus 484 ~~A~~~~~~al~l~P~~~-----~~~~~lg~~~~~~g-~~~~-~~~~~~al~~ 529 (681)
T 2pzi_A 484 DSATKHFTEVLDTFPGEL-----APKLALAATAELAG-NTDE-HKFYQTVWST 529 (681)
T ss_dssp HHHHHHHHHHHHHSTTCS-----HHHHHHHHHHHHHT-CCCT-TCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCh-----HHHHHHHHHHHHcC-ChHH-HHHHHHHHHh
Confidence 999999999999998854 23345999999998 9999 9999999987
No 55
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.25 E-value=5.9e-11 Score=100.43 Aligned_cols=119 Identities=12% Similarity=0.129 Sum_probs=110.3
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..+++++...|+++.++..+|.++...|++++|++..+++++++|+++.++..+|.++...|++++|+..+++
T Consensus 152 ~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 231 (327)
T 3cv0_A 152 NEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNR 231 (327)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+....|.. ...+..+|.+++..| ++++|++.|++.+...
T Consensus 232 a~~~~~~~-----~~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~~ 270 (327)
T 3cv0_A 232 ALDINPGY-----VRVMYNMAVSYSNMS-QYDLAAKQLVRAIYMQ 270 (327)
T ss_dssp HHHHCTTC-----HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHcCCCC-----HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhC
Confidence 99988763 245667999999998 9999999999988764
No 56
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.25 E-value=4e-11 Score=95.85 Aligned_cols=115 Identities=15% Similarity=0.017 Sum_probs=60.6
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH-HcCCHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQ-HDCCFKEAVQFME 80 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~-~~Gr~~egi~~l~ 80 (235)
|+.++++..+++++..+|+++.++..+|.++...|++++|++..+++++++| ++.....++.+.. ..++..+++..++
T Consensus 20 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~ 98 (176)
T 2r5s_A 20 GEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLE 98 (176)
T ss_dssp TCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHH
Confidence 6666777777777777777777777777777777776666665555555555 4444333333321 1122233445555
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhc
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 123 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i 123 (235)
++....|..+ ..++ .+|.++...| ++++|++.|++.+
T Consensus 99 ~al~~~P~~~---~~~~--~la~~~~~~g-~~~~A~~~~~~~l 135 (176)
T 2r5s_A 99 QELAANPDNF---ELAC--ELAVQYNQVG-RDEEALELLWNIL 135 (176)
T ss_dssp HHHHHSTTCH---HHHH--HHHHHHHHTT-CHHHHHHHHHHHH
T ss_pred HHHHhCCCCH---HHHH--HHHHHHHHcc-cHHHHHHHHHHHH
Confidence 5544444421 1122 2455555544 4555555555444
No 57
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.25 E-value=1.4e-10 Score=87.19 Aligned_cols=104 Identities=7% Similarity=-0.065 Sum_probs=94.0
Q ss_pred CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHH
Q 026637 17 YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTH 96 (235)
Q Consensus 17 ~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H 96 (235)
..|.++..+..+|..+...|++++|+..++++++++|+++.++..+|.++..+|++++|+..++++....|..+ .
T Consensus 4 ~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~-----~ 78 (137)
T 3q49_B 4 MKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV-----K 78 (137)
T ss_dssp --CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----H
T ss_pred CccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhH-----H
Confidence 45778899999999999999999999999999999999999999999999999999999999999999987742 3
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 97 NWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 97 ~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.+..+|.+++..| ++++|+..|.+.+...
T Consensus 79 ~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~ 107 (137)
T 3q49_B 79 AHFFLGQCQLEME-SYDEAIANLQRAYSLA 107 (137)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hHHHHHHHHHHHHHHC
Confidence 4556999999998 9999999999998764
No 58
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.25 E-value=6.5e-11 Score=84.82 Aligned_cols=104 Identities=9% Similarity=-0.049 Sum_probs=93.9
Q ss_pred CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHH
Q 026637 18 NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHN 97 (235)
Q Consensus 18 ~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~ 97 (235)
+|+++.++..+|..+...|++++|+..++++++++|+++.++..+|.++..+|++++|+..++++....|... . ...
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~-~--~~~ 78 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEY-N--KDV 78 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTT-C--HHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccc-h--HHH
Confidence 6888888899999999999999999999999999999999999999999999999999999999999887610 1 245
Q ss_pred HHHHHHHHHhC-CCCHHHHHHHHHhhchh
Q 026637 98 WWHVALCYLEG-HSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 98 ~WHlAL~~le~-G~~~deAl~~yd~~i~~ 125 (235)
+..+|.+++.. | ++++|++.+++.+..
T Consensus 79 ~~~l~~~~~~~~~-~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 79 WAAKADALRYIEG-KEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHHHHHHTTCSS-CSHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhC-CHHHHHHHHHHHhhc
Confidence 56799999999 9 999999999998876
No 59
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.24 E-value=5.1e-11 Score=103.24 Aligned_cols=119 Identities=10% Similarity=0.047 Sum_probs=109.5
Q ss_pred CChhhHHHHHHhhcCCCCC--ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQ--EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~--~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
|+.++++..+++++...|+ ++.++..+|.++...|++++|++..++++.++|+++.++..+|.++...|++++|+..+
T Consensus 195 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 274 (368)
T 1fch_A 195 SLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAY 274 (368)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 6788999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+++....|..+ ..+..+|.+++..| ++++|+..|++.+...
T Consensus 275 ~~al~~~~~~~-----~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~ 315 (368)
T 1fch_A 275 RRALELQPGYI-----RSRYNLGISCINLG-AHREAVEHFLEALNMQ 315 (368)
T ss_dssp HHHHHHCTTCH-----HHHHHHHHHHHHHT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcH-----HHHHHHHHHHHHCC-CHHHHHHHHHHHHHhC
Confidence 99999887642 34456999999998 9999999999988763
No 60
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.24 E-value=1.4e-11 Score=92.37 Aligned_cols=90 Identities=13% Similarity=0.090 Sum_probs=82.8
Q ss_pred CCChhhHHHHHHhhcCC---CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY---NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQ 77 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~---~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~ 77 (235)
+|+.++++...++++.. +|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++|+.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 82 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVE 82 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHH
Confidence 58999999999999999 688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHchhhhccCC
Q 026637 78 FMEECSSTWSSCS 90 (235)
Q Consensus 78 ~l~~a~~~w~~~~ 90 (235)
.++++....|..+
T Consensus 83 ~~~~al~~~p~~~ 95 (117)
T 3k9i_A 83 LLLKIIAETSDDE 95 (117)
T ss_dssp HHHHHHHHHCCCH
T ss_pred HHHHHHHhCCCcH
Confidence 9999999988854
No 61
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.24 E-value=9.2e-11 Score=93.95 Aligned_cols=120 Identities=8% Similarity=-0.011 Sum_probs=109.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHh-CCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLEL-GQMSDAEEAAKKGLK--INKHDCWSQHALCHVLQHDCCFKEAVQ 77 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~-g~~~~Ae~~arrAL~--L~P~dawA~halahvl~~~Gr~~egi~ 77 (235)
.|+.++++...++++...|+++.++..+|..+... |++++|+...+++++ .+|+++.++..+|.++...|++++|+.
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 134 (225)
T 2vq2_A 55 LKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEA 134 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHH
Confidence 48999999999999999999999999999999999 999999999999999 778889999999999999999999999
Q ss_pred HHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 78 FMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 78 ~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.+++.....|.. ...+..+|.+++..| ++++|++.|++.+...
T Consensus 135 ~~~~~~~~~~~~-----~~~~~~la~~~~~~~-~~~~A~~~~~~~~~~~ 177 (225)
T 2vq2_A 135 YLKRSLAAQPQF-----PPAFKELARTKMLAG-QLGDADYYFKKYQSRV 177 (225)
T ss_dssp HHHHHHHHSTTC-----HHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCC-----chHHHHHHHHHHHcC-CHHHHHHHHHHHHHhC
Confidence 999999987763 245567999999998 9999999999988763
No 62
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.24 E-value=4.6e-11 Score=94.08 Aligned_cols=90 Identities=10% Similarity=0.096 Sum_probs=85.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH-HH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQ-FM 79 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~-~l 79 (235)
+|+.++|+..+++++..+|+++.++..+|.++...|++++|+..++++++++|+++.++..+|.++..+|++++++. ++
T Consensus 44 ~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~ 123 (150)
T 4ga2_A 44 AKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWV 123 (150)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999987665 67
Q ss_pred HHchhhhccCC
Q 026637 80 EECSSTWSSCS 90 (235)
Q Consensus 80 ~~a~~~w~~~~ 90 (235)
+++....|..+
T Consensus 124 ~~al~l~P~~~ 134 (150)
T 4ga2_A 124 ERAAKLFPGSP 134 (150)
T ss_dssp HHHHHHSTTCH
T ss_pred HHHHHhCcCCH
Confidence 99999998854
No 63
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.23 E-value=9e-11 Score=109.17 Aligned_cols=117 Identities=13% Similarity=0.062 Sum_probs=76.3
Q ss_pred CCh-hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc---------CC
Q 026637 2 GRP-DLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHD---------CC 71 (235)
Q Consensus 2 G~~-~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~---------Gr 71 (235)
|+. ++|+..+++++..+|+++.++..+|.++...|++++|++.+++|++++|+ +.++..+|.++... |+
T Consensus 116 g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~~~~g~ 194 (474)
T 4abn_A 116 PDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGDEHSRH 194 (474)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHHHHHHH
T ss_pred cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChhhhhhh
Confidence 566 66666666666666666666666666666666666666666666666666 56666666666666 66
Q ss_pred HHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhC--------CCCHHHHHHHHHhhchh
Q 026637 72 FKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEG--------HSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 72 ~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~--------G~~~deAl~~yd~~i~~ 125 (235)
+++|+..++++....|..+ ..|..+|.+++.. | ++++|++.|++.+..
T Consensus 195 ~~~A~~~~~~al~~~p~~~-----~~~~~lg~~~~~~~~~~~~~~g-~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 195 VMDSVRQAKLAVQMDVLDG-----RSWYILGNAYLSLYFNTGQNPK-ISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHHHHTTCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHHHHhhccccc-hHHHHHHHHHHHHHh
Confidence 6666666666666665532 2333466666665 6 666666666666654
No 64
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.23 E-value=1.6e-10 Score=85.51 Aligned_cols=103 Identities=14% Similarity=0.097 Sum_probs=85.7
Q ss_pred CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHH
Q 026637 17 YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTH 96 (235)
Q Consensus 17 ~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H 96 (235)
..|..+..+..+|..+...|++++|++..+++++++|+++.++..+|.++..+|++++|+..++++....|..+ .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~-----~ 85 (133)
T 2lni_A 11 MNPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFI-----K 85 (133)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCH-----H
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCch-----H
Confidence 45667788888888888999999999999999999999999999999999999999999999988888876632 3
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 97 NWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 97 ~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.+..+|.+++..| ++++|+..|++.+..
T Consensus 86 ~~~~la~~~~~~~-~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 86 GYTRKAAALEAMK-DYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-hHHHHHHHHHHHHHh
Confidence 4556888888887 899999998887664
No 65
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.23 E-value=9.4e-11 Score=99.18 Aligned_cols=124 Identities=10% Similarity=0.023 Sum_probs=111.2
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|++.++++++++|+++.++..++.++...|++++|+..++
T Consensus 185 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 264 (327)
T 3cv0_A 185 SNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLV 264 (327)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcch-------hHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFM-------YTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l-------~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+... ....+..++.++...| ++++|..+|++.+..
T Consensus 265 ~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~~l~~ 315 (327)
T 3cv0_A 265 RAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMN-RPDLVELTYAQNVEP 315 (327)
T ss_dssp HHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTT-CHHHHHHHTTCCSHH
T ss_pred HHHHhCCccccccccchhhcCHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHh
Confidence 9998887721110 1235567999999998 999999999887776
No 66
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.22 E-value=6.9e-11 Score=90.10 Aligned_cols=89 Identities=10% Similarity=-0.019 Sum_probs=82.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++..+|+++.++..+|.++...|++++|++.+++|++++|+++.++..+|.++...|++++|+..++
T Consensus 30 ~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~ 109 (121)
T 1hxi_A 30 LANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLR 109 (121)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccC
Q 026637 81 ECSSTWSSC 89 (235)
Q Consensus 81 ~a~~~w~~~ 89 (235)
++....|..
T Consensus 110 ~al~~~P~~ 118 (121)
T 1hxi_A 110 AWLLSQPQY 118 (121)
T ss_dssp HHHC-----
T ss_pred HHHHhCcCC
Confidence 999887763
No 67
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.22 E-value=1.4e-10 Score=91.34 Aligned_cols=90 Identities=14% Similarity=0.026 Sum_probs=87.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|++++++..+++++..+|+++.++..+|.++...|++++|+..++++++++|+++.++..+|.++..+|++++|+..++
T Consensus 24 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 24 RKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCC
Q 026637 81 ECSSTWSSCS 90 (235)
Q Consensus 81 ~a~~~w~~~~ 90 (235)
++....|..+
T Consensus 104 ~al~~~p~~~ 113 (164)
T 3sz7_A 104 KGIEAEGNGG 113 (164)
T ss_dssp HHHHHHSSSC
T ss_pred HHHHhCCCch
Confidence 9999998865
No 68
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.22 E-value=1.5e-10 Score=96.25 Aligned_cols=118 Identities=8% Similarity=0.060 Sum_probs=107.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHH----HHHHHHHHHHHcCCHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCW----SQHALCHVLQHDCCFKEAV 76 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~daw----A~halahvl~~~Gr~~egi 76 (235)
.|+.++++...++++..+|+++.++..+|.++...|++++|++.++++++ .|+++. ++..+|.++...|++++|+
T Consensus 16 ~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~ 94 (272)
T 3u4t_A 16 NNNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAI 94 (272)
T ss_dssp TTCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHH
Confidence 48999999999999999999999999999999999999999999999999 555544 4899999999999999999
Q ss_pred HHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 77 QFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 77 ~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
..++++....|..+ ..+..+|.+++..| ++++|+..|++.+..
T Consensus 95 ~~~~~a~~~~~~~~-----~~~~~l~~~~~~~~-~~~~A~~~~~~al~~ 137 (272)
T 3u4t_A 95 QQYQAAVDRDTTRL-----DMYGQIGSYFYNKG-NFPLAIQYMEKQIRP 137 (272)
T ss_dssp HHHHHHHHHSTTCT-----HHHHHHHHHHHHTT-CHHHHHHHHGGGCCS
T ss_pred HHHHHHHhcCcccH-----HHHHHHHHHHHHcc-CHHHHHHHHHHHhhc
Confidence 99999999988754 34556999999998 999999999999876
No 69
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.22 E-value=1.2e-10 Score=96.61 Aligned_cols=118 Identities=17% Similarity=0.131 Sum_probs=105.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++..+|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++|+..++
T Consensus 56 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 135 (275)
T 1xnf_A 56 LGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLL 135 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+ ....+ .+++ +..| ++++|+..|++.+..
T Consensus 136 ~a~~~~~~~~---~~~~~--~~~~-~~~~-~~~~A~~~~~~~~~~ 173 (275)
T 1xnf_A 136 AFYQDDPNDP---FRSLW--LYLA-EQKL-DEKQAKEVLKQHFEK 173 (275)
T ss_dssp HHHHHCTTCH---HHHHH--HHHH-HHHH-CHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCh---HHHHH--HHHH-HHhc-CHHHHHHHHHHHHhc
Confidence 9999887743 12232 4444 3557 899999999998876
No 70
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.1e-10 Score=87.63 Aligned_cols=86 Identities=7% Similarity=-0.014 Sum_probs=84.2
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++...++++..+|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++|+..++
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 17 KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hchhhh
Q 026637 81 ECSSTW 86 (235)
Q Consensus 81 ~a~~~w 86 (235)
++....
T Consensus 97 ~al~~~ 102 (126)
T 3upv_A 97 AARTKD 102 (126)
T ss_dssp HHHHHH
T ss_pred HHHHhC
Confidence 999888
No 71
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.20 E-value=1.4e-09 Score=96.81 Aligned_cols=192 Identities=11% Similarity=0.001 Sum_probs=136.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|+..++++++++|+++.++..++.++..+|++++|+..++
T Consensus 39 ~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 118 (450)
T 2y4t_A 39 AGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFK 118 (450)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCC---cchh-------HHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHh
Q 026637 81 ECSSTWSSCS---SFMY-------THNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYV 150 (235)
Q Consensus 81 ~a~~~w~~~~---~~l~-------~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l 150 (235)
+.....|..+ .... ....+.+|..++..| ++++|+..|++.+... +. ....+..-+.++.+
T Consensus 119 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~~~~~--~~---~~~~~~~l~~~~~~--- 189 (450)
T 2y4t_A 119 KVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSG-DYTAAIAFLDKILEVC--VW---DAELRELRAECFIK--- 189 (450)
T ss_dssp HHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHC--TT---CHHHHHHHHHHHHH---
T ss_pred HHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhC--CC---ChHHHHHHHHHHHH---
Confidence 9988876532 1100 001445688899998 9999999999988762 22 12222232222222
Q ss_pred cCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHH
Q 026637 151 RGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSR 207 (235)
Q Consensus 151 ~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~ 207 (235)
.|. ...-.+.+-......+.. . ..-......+...|+.+.+.+.++.+...
T Consensus 190 ~g~---~~~A~~~~~~~~~~~~~~-~--~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 240 (450)
T 2y4t_A 190 EGE---PRKAISDLKAASKLKNDN-T--EAFYKISTLYYQLGDHELSLSEVRECLKL 240 (450)
T ss_dssp TTC---GGGGHHHHHHHHHHHCSC-H--HHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCC---HHHHHHHHHHHHHhCCCC-H--HHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 232 122222222222221111 1 12223355677788888888777766543
No 72
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.20 E-value=7.9e-11 Score=109.58 Aligned_cols=115 Identities=10% Similarity=0.004 Sum_probs=93.0
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCH-HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQM-SDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEC 82 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~-~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a 82 (235)
.++++..++++....|+++.++..+|..+...|+| ++|++.+++|++++|+++.++..+|.++..+|++++|+..++++
T Consensus 84 ~~~al~~l~~~~~~~~~~a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 163 (474)
T 4abn_A 84 MEKTLQQMEEVLGSAQVEAQALMLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGA 163 (474)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCchhHHHHHHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45667777777778888888888888888888888 88888888888888888888888888888888888888888888
Q ss_pred hhhhccCCcchhHHHHHHHHHHHHhC---------CCCHHHHHHHHHhhchh
Q 026637 83 SSTWSSCSSFMYTHNWWHVALCYLEG---------HSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 83 ~~~w~~~~~~l~~H~~WHlAL~~le~---------G~~~deAl~~yd~~i~~ 125 (235)
....|+ + ..+..+|.++... | ++++|++.|++.+..
T Consensus 164 l~~~p~-~-----~~~~~lg~~~~~~~~~~~~~~~g-~~~~A~~~~~~al~~ 208 (474)
T 4abn_A 164 LTHCKN-K-----VSLQNLSMVLRQLQTDSGDEHSR-HVMDSVRQAKLAVQM 208 (474)
T ss_dssp HTTCCC-H-----HHHHHHHHHHTTCCCSCHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HhhCCC-H-----HHHHHHHHHHHHhccCChhhhhh-hHHHHHHHHHHHHHh
Confidence 888755 2 2334588888887 8 888888888887654
No 73
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.20 E-value=1.4e-10 Score=97.64 Aligned_cols=122 Identities=10% Similarity=0.004 Sum_probs=107.1
Q ss_pred CCChhhHHHHHHhhcCCCCCC---hhHHHHHHHHHHH--------hCCHHHHHHHHHHHHhhCCCCHHHH----------
Q 026637 1 MGRPDLCFDIIHQVLPYNQQE---DFIFGILAFSLLE--------LGQMSDAEEAAKKGLKINKHDCWSQ---------- 59 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~---~~~~g~~Af~L~e--------~g~~~~Ae~~arrAL~L~P~dawA~---------- 59 (235)
+|+.++|+...++++..+|++ +.++..+|.++.. .|++++|++..+++++++|+++.+.
T Consensus 65 ~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~ 144 (261)
T 3qky_A 65 NKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELR 144 (261)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHH
Confidence 589999999999999988754 5789999999999 9999999999999999999998887
Q ss_pred -------HHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhC----------CCCHHHHHHHHHhh
Q 026637 60 -------HALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEG----------HSPMRKVLEIYDNH 122 (235)
Q Consensus 60 -------halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~----------G~~~deAl~~yd~~ 122 (235)
..+|.++..+|++++|+..+++.....|..+.. ...+..+|.++... | ++++|+..|++.
T Consensus 145 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~--~~a~~~l~~~~~~~g~~~~~~~~~~-~~~~A~~~~~~~ 221 (261)
T 3qky_A 145 AKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWA--DDALVGAMRAYIAYAEQSVRARQPE-RYRRAVELYERL 221 (261)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTH--HHHHHHHHHHHHHHHHTSCGGGHHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchH--HHHHHHHHHHHHHhcccchhhcccc-hHHHHHHHHHHH
Confidence 777999999999999999999999999885422 23445688888766 7 899999999999
Q ss_pred chh
Q 026637 123 IWK 125 (235)
Q Consensus 123 i~~ 125 (235)
+..
T Consensus 222 ~~~ 224 (261)
T 3qky_A 222 LQI 224 (261)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 74
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.20 E-value=1.3e-10 Score=100.89 Aligned_cols=118 Identities=14% Similarity=0.031 Sum_probs=69.1
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++|+...++++..+|+++.++..+|-++...|++++|++..+++++++|++.......+..+..+|+.+++++.+++
T Consensus 131 g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~ 210 (287)
T 3qou_A 131 SNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQ 210 (287)
T ss_dssp TCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHH
Confidence 45555555555555555555555555555555555555555555555555554444444444445555555555555555
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+....|+.+ . .+..+|..++..| ++++|++.|.+.+..
T Consensus 211 al~~~P~~~---~--~~~~la~~l~~~g-~~~~A~~~l~~~l~~ 248 (287)
T 3qou_A 211 QVAENPEDA---A--LATQLALQLHQVG-RNEEALELLFGHLRX 248 (287)
T ss_dssp HHHHCTTCH---H--HHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHhcCCccH---H--HHHHHHHHHHHcc-cHHHHHHHHHHHHhc
Confidence 555555532 2 3335888888887 888888888888876
No 75
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.19 E-value=2e-10 Score=93.87 Aligned_cols=119 Identities=12% Similarity=0.093 Sum_probs=108.5
Q ss_pred CCChhhHHHHHHhhcCCCCCC-------hhHHHHHHHHHHHhCCHHHHHHHHHHHHh-----------------------
Q 026637 1 MGRPDLCFDIIHQVLPYNQQE-------DFIFGILAFSLLELGQMSDAEEAAKKGLK----------------------- 50 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~-------~~~~g~~Af~L~e~g~~~~Ae~~arrAL~----------------------- 50 (235)
+|+.++++..+++++...|.+ +.++..+|.++...|++++|.+..++++.
T Consensus 51 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~ 130 (258)
T 3uq3_A 51 KGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEA 130 (258)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHH
Confidence 589999999999999988766 78999999999999999999999999999
Q ss_pred ---hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 51 ---INKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 51 ---L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++|+++.++..+|.++...|++++|+..++++....|..+ ..+..+|.+++..| ++++|+..|++.+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~-----~~~~~l~~~~~~~~-~~~~A~~~~~~al~~ 202 (258)
T 3uq3_A 131 EAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA-----RGYSNRAAALAKLM-SFPEAIADCNKAIEK 202 (258)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccH-----HHHHHHHHHHHHhC-CHHHHHHHHHHHHHh
Confidence 7888999999999999999999999999999999987743 34556999999998 999999999999876
No 76
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.19 E-value=1.7e-10 Score=92.08 Aligned_cols=120 Identities=9% Similarity=-0.021 Sum_probs=86.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHH-HHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFS-LLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~-L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
.|+.++++..+++++...| ++..+...+.. +.+.+...+|++..+++++++|+++.++..+|.++..+|++++|+..+
T Consensus 53 ~g~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~ 131 (176)
T 2r5s_A 53 TKQFELAQELLATIPLEYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELL 131 (176)
T ss_dssp TTCHHHHHHHHTTCCGGGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHH
Confidence 4778888888888888888 77666655533 333344455788888888888888888888888888888888888888
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++..+..|.... ...+..++.++...| ++++|+..|++.+..
T Consensus 132 ~~~l~~~p~~~~---~~a~~~l~~~~~~~g-~~~~A~~~y~~al~~ 173 (176)
T 2r5s_A 132 WNILKVNLGAQD---GEVKKTFMDILSALG-QGNAIASKYRRQLYS 173 (176)
T ss_dssp HHHHTTCTTTTT---THHHHHHHHHHHHHC-SSCHHHHHHHHHHHH
T ss_pred HHHHHhCcccCh---HHHHHHHHHHHHHhC-CCCcHHHHHHHHHHH
Confidence 888877765321 123445777777777 788888888776653
No 77
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.19 E-value=1.4e-09 Score=100.70 Aligned_cols=118 Identities=8% Similarity=-0.013 Sum_probs=69.4
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..+++++...|.+...+..++.++...|++++|++.++++++++|+++.++..++.++...|++++|+..+++
T Consensus 387 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 466 (597)
T 2xpi_A 387 NKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQS 466 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 55566666666666656666666666666666666666666666666666666666666666666666666666666666
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.....|..+ ..+..++..+...| ++++|+++|++.+..
T Consensus 467 ~~~~~~~~~-----~~~~~l~~~~~~~g-~~~~A~~~~~~~~~~ 504 (597)
T 2xpi_A 467 SYALFQYDP-----LLLNELGVVAFNKS-DMQTAINHFQNALLL 504 (597)
T ss_dssp HHHHCCCCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHhCCCCh-----HHHHHHHHHHHHhC-CHHHHHHHHHHHHHh
Confidence 655554422 12333555665655 666666666665544
No 78
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.18 E-value=3.3e-10 Score=93.37 Aligned_cols=124 Identities=14% Similarity=0.166 Sum_probs=105.6
Q ss_pred CCChhhHHHHHHhhcCC--------CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY--------NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI--------NKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~--------~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L--------~P~dawA~halah 64 (235)
+|+.++++...++++.. .|..+.++..+|.++...|++++|++..++++.+ +|..+.++..+|.
T Consensus 56 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 135 (283)
T 3edt_B 56 QNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLAL 135 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 58999999999999965 4667789999999999999999999999999999 6888999999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhccC---CcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSSC---SSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~~---~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++...|++++|+..++++....... +.......+..+|.+++..| ++++|+..|++.+..
T Consensus 136 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 136 LCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQG-KYQDAETLYKEILTR 198 (283)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHH
Confidence 9999999999999999998772110 01112345566999999998 999999999999875
No 79
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.17 E-value=1.1e-10 Score=101.21 Aligned_cols=121 Identities=9% Similarity=0.020 Sum_probs=107.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++|+..+++++..+|+..+.....+..+.+.++.++|++..+++++++|+++.++.++|.++..+|++++|+..++
T Consensus 164 ~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~ 243 (287)
T 3qou_A 164 LNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLF 243 (287)
T ss_dssp TTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHH
Confidence 58999999999999999998888888888889999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+..+..|..+. ...+-.++.++...| +.++|+..|++.+..
T Consensus 244 ~~l~~~p~~~~---~~a~~~l~~~~~~~g-~~~~a~~~~r~al~~ 284 (287)
T 3qou_A 244 GHLRXDLTAAD---GQTRXTFQEILAALG-TGDALASXYRRQLYA 284 (287)
T ss_dssp HHHHHCTTGGG---GHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHhccccccc---chHHHHHHHHHHHcC-CCCcHHHHHHHHHHH
Confidence 99999877421 233445888888888 899999999998764
No 80
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.17 E-value=1.9e-10 Score=102.35 Aligned_cols=119 Identities=14% Similarity=0.077 Sum_probs=106.7
Q ss_pred CCChhhHHHHHHhhcCCCCCC---------------hhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQE---------------DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHV 65 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~---------------~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahv 65 (235)
.|+.++|+...++++...|++ ..++..+|.++...|+|++|++.+++|++++|+++.++..+|.+
T Consensus 160 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 239 (336)
T 1p5q_A 160 EGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEA 239 (336)
T ss_dssp HTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 388999999999999999998 58999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHH-HHHHHhhchh
Q 026637 66 LQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKV-LEIYDNHIWK 125 (235)
Q Consensus 66 l~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deA-l~~yd~~i~~ 125 (235)
+..+|++++|+..++++....|..+ ..+..++.++...| +++++ ..+|.+.+..
T Consensus 240 ~~~~g~~~~A~~~~~~al~l~P~~~-----~a~~~l~~~~~~~~-~~~~a~~~~~~~~~~~ 294 (336)
T 1p5q_A 240 HLAVNDFELARADFQKVLQLYPNNK-----AAKTQLAVCQQRIR-RQLAREKKLYANMFER 294 (336)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCSSCH-----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999988742 34456999998888 89988 5577666544
No 81
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.17 E-value=4.1e-10 Score=83.20 Aligned_cols=104 Identities=11% Similarity=0.061 Sum_probs=93.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.+++....++++..+|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++|+..++
T Consensus 29 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 108 (133)
T 2lni_A 29 KGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQ 108 (133)
T ss_dssp TTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCC
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGH 109 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G 109 (235)
+.....|..+ -.+-.++.+++..|
T Consensus 109 ~~~~~~p~~~-----~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 109 KALDLDSSCK-----EAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHCGGGT-----HHHHHHHHHHHHHT
T ss_pred HHHHhCCCch-----HHHHHHHHHHHHhc
Confidence 9999887743 23334777776654
No 82
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.16 E-value=2.2e-09 Score=99.23 Aligned_cols=118 Identities=8% Similarity=0.068 Sum_probs=95.2
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++...++++...|+++.++..++.++..+|++++|++.++++++++|+++.++..++.++...|++++|+..+++
T Consensus 353 g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 432 (597)
T 2xpi_A 353 GEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTT 432 (597)
T ss_dssp TCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 56667777777777777778888888888888888888888888888888888888888888888888888888888888
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.....|..+ ..+..++..+...| ++++|+++|++.+..
T Consensus 433 ~~~~~~~~~-----~~~~~l~~~~~~~g-~~~~A~~~~~~~~~~ 470 (597)
T 2xpi_A 433 AARLFQGTH-----LPYLFLGMQHMQLG-NILLANEYLQSSYAL 470 (597)
T ss_dssp HHHTTTTCS-----HHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHhCccch-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 887776533 23345888888887 888888888888765
No 83
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.16 E-value=4.7e-10 Score=81.36 Aligned_cols=102 Identities=13% Similarity=0.221 Sum_probs=86.5
Q ss_pred CCCC-hhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHH
Q 026637 18 NQQE-DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTH 96 (235)
Q Consensus 18 ~p~~-~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H 96 (235)
+|.. +..+..+|..+...|++++|++..++++.++|+++.++..++.++...|++++|+.++++.....|..+ .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~ 78 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA-----E 78 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----H
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccH-----H
Confidence 4544 678888999999999999999999999999999999999999999999999999999999988876632 3
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 97 NWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 97 ~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.+..+|.++...| ++++|+..|++.+..
T Consensus 79 ~~~~la~~~~~~~-~~~~A~~~~~~~~~~ 106 (125)
T 1na0_A 79 AWYNLGNAYYKQG-DYDEAIEYYQKALEL 106 (125)
T ss_dssp HHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-CHHHHHHHHHHHHHh
Confidence 4456899999988 899999999988764
No 84
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.15 E-value=7.3e-11 Score=110.50 Aligned_cols=114 Identities=10% Similarity=0.047 Sum_probs=100.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++|+...++++..+|+++.++..+|.++.+.|++++|++.+++|++++|+++.++..+|.++..+|++++|+..++
T Consensus 19 ~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~ 98 (477)
T 1wao_1 19 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98 (477)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHH--HHhCCCCHHHHHHHHH
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALC--YLEGHSPMRKVLEIYD 120 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~--~le~G~~~deAl~~yd 120 (235)
++....|..+ ..+.. ++.+ ++..| ++++|++.|+
T Consensus 99 ~al~~~p~~~---~~~~~--l~~~~~~~~~g-~~~~A~~~~~ 134 (477)
T 1wao_1 99 TVVKVKPHDK---DAKMK--YQECNKIVKQK-AFERAIAGDE 134 (477)
T ss_dssp HHHHHSTTCT---THHHH--HHHHHHHHHHH-HHCCC-----
T ss_pred HHHHhCCCCH---HHHHH--HHHHHHHHHHH-HHHHHhcccc
Confidence 9999988754 23443 5655 78887 9999999999
No 85
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.15 E-value=3.4e-09 Score=95.38 Aligned_cols=195 Identities=10% Similarity=0.039 Sum_probs=137.2
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|.++.++..+|.++...|++++|+..++++++++|+++.++..++.++...|++++|+..++
T Consensus 283 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 362 (514)
T 2gw1_A 283 RNDSTEYYNYFDKALKLDSNNSSVYYHRGQMNFILQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFS 362 (514)
T ss_dssp SSCCTTGGGHHHHHHTTCTTCTHHHHHHHHHHHHTTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhhcCcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCcccccccc
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNR 160 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~~g~r 160 (235)
+.....|..+ ..+..+|.+++..| ++++|+..|++.+... ++.. .......+...+-++.+.-.. ..+
T Consensus 363 ~~~~~~~~~~-----~~~~~la~~~~~~~-~~~~A~~~~~~a~~~~--~~~~-~~~~~~~~~~~l~~~~~~~~~---~~~ 430 (514)
T 2gw1_A 363 EAKRKFPEAP-----EVPNFFAEILTDKN-DFDKALKQYDLAIELE--NKLD-GIYVGIAPLVGKATLLTRNPT---VEN 430 (514)
T ss_dssp HHHHHSTTCS-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH--HTSS-SCSSCSHHHHHHHHHHHTSCC---TTH
T ss_pred HHHHHcccCH-----HHHHHHHHHHHHCC-CHHHHHHHHHHHHHhh--hccc-hHHHHHHHHHHHHHHHhhhhh---cCC
Confidence 9998887744 34556999999998 9999999999988764 1211 100001122222222222000 012
Q ss_pred hHHHHHHHHhhh-cchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHH
Q 026637 161 LKVLADCVADQA-NWYLECHLDLLILWALANTGEVSKAEDLLKGLKSR 207 (235)
Q Consensus 161 w~~la~~~~~~~-~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~ 207 (235)
++.-...+..-. ..+..+..-.....++...|+.+.+.+.++..-..
T Consensus 431 ~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 478 (514)
T 2gw1_A 431 FIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADL 478 (514)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 332222222211 11111222234566777889988888777666554
No 86
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.14 E-value=5.6e-10 Score=81.62 Aligned_cols=106 Identities=11% Similarity=0.055 Sum_probs=96.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.+++....++++...|+++.++..+|.++...|++++|+...++++.++|+++.++..+|.++...|++++|+..++
T Consensus 25 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 104 (131)
T 2vyi_A 25 VENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYK 104 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCH
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPM 112 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~ 112 (235)
++....|..+ ..+..++.++...| ++
T Consensus 105 ~~~~~~p~~~-----~~~~~l~~~~~~~~-~~ 130 (131)
T 2vyi_A 105 KALELDPDNE-----TYKSNLKIAELKLR-EA 130 (131)
T ss_dssp HHHHHSTTCH-----HHHHHHHHHHHHHT-TC
T ss_pred HHHhcCccch-----HHHHHHHHHHHHHh-cC
Confidence 9999987743 34456888888776 54
No 87
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.13 E-value=1.2e-09 Score=79.08 Aligned_cols=103 Identities=12% Similarity=0.121 Sum_probs=92.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+++.++..+|..+...|++++|+...++++.++|+++.++..++.++...|++++|+..++
T Consensus 22 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 101 (125)
T 1na0_A 22 QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 101 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhC
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEG 108 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~ 108 (235)
+.....|..+ ..+..++..+...
T Consensus 102 ~~~~~~~~~~-----~~~~~l~~~~~~~ 124 (125)
T 1na0_A 102 KALELDPNNA-----EAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHCTTCH-----HHHHHHHHHHHHH
T ss_pred HHHHhCCCcH-----HHHHHHHHHHHhc
Confidence 9999887743 2334467666544
No 88
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.13 E-value=3.3e-10 Score=85.18 Aligned_cols=88 Identities=11% Similarity=0.078 Sum_probs=85.7
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|++++++..+++++..+|+++.++..+|.++...|++++|+..++++++++|+++.++..+|.++...|++++|+..++
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 101 (137)
T 3q49_B 22 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQ 101 (137)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hchhhhcc
Q 026637 81 ECSSTWSS 88 (235)
Q Consensus 81 ~a~~~w~~ 88 (235)
++....|.
T Consensus 102 ~a~~~~p~ 109 (137)
T 3q49_B 102 RAYSLAKE 109 (137)
T ss_dssp HHHHHHHH
T ss_pred HHHHHChh
Confidence 99998877
No 89
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.13 E-value=2e-09 Score=93.50 Aligned_cols=115 Identities=10% Similarity=0.059 Sum_probs=101.6
Q ss_pred hhhHHHHHHhhcC-CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 4 PDLCFDIIHQVLP-YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCW-SQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 4 ~~~al~~~~ral~-~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~daw-A~halahvl~~~Gr~~egi~~l~~ 81 (235)
.++++...+|++. ..|++..++..++..+...|++++|++.++++++++|+++. ++..++.++..+|++++++..+++
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 159 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 159 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3899999999999 79999999999999999999999999999999999999997 999999999999999999999999
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHh---CCCCHHHHHHHHHhhchhh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLE---GHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le---~G~~~deAl~~yd~~i~~~ 126 (235)
+....|.. .+.| ++...++ .| ++++|+++|++.+...
T Consensus 160 a~~~~p~~-----~~~~--~~~a~~~~~~~~-~~~~A~~~~~~al~~~ 199 (308)
T 2ond_A 160 AREDARTR-----HHVY--VTAALMEYYCSK-DKSVAFKIFELGLKKY 199 (308)
T ss_dssp HHTSTTCC-----THHH--HHHHHHHHHTSC-CHHHHHHHHHHHHHHH
T ss_pred HHhcCCCC-----HHHH--HHHHHHHHHHcC-CHHHHHHHHHHHHHhC
Confidence 99887653 2444 3444443 67 8999999999999873
No 90
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=99.12 E-value=4e-09 Score=92.59 Aligned_cols=125 Identities=12% Similarity=-0.014 Sum_probs=102.7
Q ss_pred CCChhhHHHHHHhhcCCCCCCh-----hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHc
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED-----FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC------WSQHALCHVLQHD 69 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~-----~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da------wA~halahvl~~~ 69 (235)
.|+.++++..+++++...|.+. .++..+|..+...|++++|++..++|+++.|+.. +++..+|.++..+
T Consensus 27 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 106 (373)
T 1hz4_A 27 DGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQ 106 (373)
T ss_dssp TTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHC
Confidence 4899999999999998776543 2678889999999999999999999999987653 4578899999999
Q ss_pred CCHHHHHHHHHHchhhhccCCc---chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 70 CCFKEAVQFMEECSSTWSSCSS---FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 70 Gr~~egi~~l~~a~~~w~~~~~---~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
|++++++..++++....+..+. ......+..+|..+.+.| ++++|++.|++.+...
T Consensus 107 G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 107 GFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWA-RLDEAEASARSGIEVL 165 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHh
Confidence 9999999999999887654221 112234445899999998 9999999999998763
No 91
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.12 E-value=2e-09 Score=93.88 Aligned_cols=113 Identities=17% Similarity=0.121 Sum_probs=68.7
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH--HcCCHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQ--HDCCFKEAVQFM 79 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~--~~Gr~~egi~~l 79 (235)
|+.++|+..+++ |+++.++..++.++...|++++|++..+++++++|++.......+++.. ..|++++|+..+
T Consensus 115 g~~~~Al~~l~~-----~~~~~~~~~l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~ 189 (291)
T 3mkr_A 115 QNPDAALRTLHQ-----GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIF 189 (291)
T ss_dssp TCHHHHHHHHTT-----CCSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHH
T ss_pred CCHHHHHHHHhC-----CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHH
Confidence 555555555555 5555566666666666666666666666666666666544444443322 335666666666
Q ss_pred HHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 80 EECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 80 ~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++.....|..+ ..++.+|.+++..| ++++|++.|++.+..
T Consensus 190 ~~~l~~~p~~~-----~~~~~la~~~~~~g-~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 190 QEMADKCSPTL-----LLLNGQAACHMAQG-RWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHHSCCCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcH-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 66666655421 23445777777776 777777777777765
No 92
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.11 E-value=4.2e-10 Score=89.52 Aligned_cols=125 Identities=10% Similarity=-0.071 Sum_probs=99.8
Q ss_pred CCChhhHHHHHHhhcC------CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh---CCCC----HHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLP------YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI---NKHD----CWSQHALCHVLQ 67 (235)
Q Consensus 1 ~G~~~~al~~~~ral~------~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L---~P~d----awA~halahvl~ 67 (235)
.|++++++...++++. ..|....++..+|.++...|++++|++.+++|+++ .|++ +.++..+|.++.
T Consensus 39 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 118 (203)
T 3gw4_A 39 MDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVAL 118 (203)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 4888999999999888 44556678889999999999999999999999998 4533 567889999999
Q ss_pred HcCCHHHHHHHHHHchhhhccCCcc-hhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 68 HDCCFKEAVQFMEECSSTWSSCSSF-MYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 68 ~~Gr~~egi~~l~~a~~~w~~~~~~-l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.+|++++|+..++++....+..+.. .....+..+|.+++..| ++++|++.|++.+...
T Consensus 119 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 119 HFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEK-NLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCc-CHHHHHHHHHHHHHHH
Confidence 9999999999999987765543321 12334456888898988 8999999998888764
No 93
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.11 E-value=1.5e-09 Score=79.52 Aligned_cols=105 Identities=7% Similarity=0.072 Sum_probs=91.7
Q ss_pred CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcch--hHHH
Q 026637 20 QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFM--YTHN 97 (235)
Q Consensus 20 ~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l--~~H~ 97 (235)
..+..+..+|..+...|++++|+..+++++.++|+++.++..+|.++...|++++|+..++++....|..+... ....
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999988887642210 1346
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 98 WWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 98 ~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+..+|.++...| ++++|++.|++.+..
T Consensus 82 ~~~la~~~~~~~-~~~~A~~~~~~~~~~ 108 (131)
T 1elr_A 82 YARIGNSYFKEE-KYKDAIHFYNKSLAE 108 (131)
T ss_dssp HHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc-cHHHHHHHHHHHHHh
Confidence 667999999998 999999999998876
No 94
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.11 E-value=8.8e-10 Score=83.09 Aligned_cols=104 Identities=6% Similarity=-0.085 Sum_probs=94.3
Q ss_pred CCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcc
Q 026637 16 PYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD---CWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSF 92 (235)
Q Consensus 16 ~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d---awA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~ 92 (235)
...|.+...+..+|..+...|++++|+..++++++++|++ +.++..+|.++...|++++++..++++....|..
T Consensus 22 ~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~--- 98 (148)
T 2dba_A 22 TPGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD--- 98 (148)
T ss_dssp CTTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC---
T ss_pred ccchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC---
Confidence 3457788999999999999999999999999999999998 9999999999999999999999999999988764
Q ss_pred hhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 93 MYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 93 l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
...+..+|.++...| ++++|+..|++.+..
T Consensus 99 --~~~~~~~a~~~~~~~-~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 99 --VKALYRRSQALEKLG-RLDQAVLDLQRCVSL 128 (148)
T ss_dssp --HHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHc
Confidence 244556999999998 999999999999876
No 95
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.10 E-value=1.6e-09 Score=77.90 Aligned_cols=98 Identities=9% Similarity=0.028 Sum_probs=88.1
Q ss_pred hhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHH
Q 026637 22 DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHV 101 (235)
Q Consensus 22 ~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHl 101 (235)
+..+..+|..+...|++++|+...++++.++|+++.++..+|.++..+|++++|+..++++....|..+ ..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~~ 78 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWG-----KGYSRK 78 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH-----HHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccH-----HHHHHH
Confidence 456778889999999999999999999999999999999999999999999999999999999877632 455569
Q ss_pred HHHHHhCCCCHHHHHHHHHhhchh
Q 026637 102 ALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 102 AL~~le~G~~~deAl~~yd~~i~~ 125 (235)
|.++...| ++++|++.|++.+..
T Consensus 79 a~~~~~~~-~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 79 AAALEFLN-RFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHTT-CHHHHHHHHHHHHTT
T ss_pred HHHHHHHh-hHHHHHHHHHHHHHc
Confidence 99999998 999999999998875
No 96
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.10 E-value=3.4e-10 Score=93.27 Aligned_cols=124 Identities=11% Similarity=0.083 Sum_probs=106.3
Q ss_pred CCChhhHHHHHHhhcCC--------CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY--------NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI--------NKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~--------~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L--------~P~dawA~halah 64 (235)
+|+.++++...++++.. .|....++..+|.++...|++++|++.+++++++ .|..+.++..+|.
T Consensus 98 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 177 (283)
T 3edt_B 98 RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLAS 177 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 48999999999999987 4677789999999999999999999999999999 8888999999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhccC--------------------------------------------CcchhHHHHHH
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSSC--------------------------------------------SSFMYTHNWWH 100 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~~--------------------------------------------~~~l~~H~~WH 100 (235)
++..+|++++|+..++++....+.. ...-....+..
T Consensus 178 ~~~~~g~~~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (283)
T 3edt_B 178 CYLKQGKYQDAETLYKEILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRS 257 (283)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 9999999999999999998763320 00112335667
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 101 VALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 101 lAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+|.++...| ++++|+..|++.+..
T Consensus 258 la~~~~~~g-~~~~A~~~~~~al~~ 281 (283)
T 3edt_B 258 LGALYRRQG-KLEAAHTLEDCASRN 281 (283)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHTT
T ss_pred HHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 999999998 999999999998764
No 97
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.10 E-value=1.6e-10 Score=102.93 Aligned_cols=114 Identities=10% Similarity=-0.076 Sum_probs=100.3
Q ss_pred hHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcC
Q 026637 6 LCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD---------------CWSQHALCHVLQHDC 70 (235)
Q Consensus 6 ~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d---------------awA~halahvl~~~G 70 (235)
+++...++++...|+++.++..+|..+...|+|++|++.+++|++++|++ +.++.++|.++..+|
T Consensus 131 ~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g 210 (336)
T 1p5q_A 131 KAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQ 210 (336)
T ss_dssp CCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34444455555677888999999999999999999999999999999999 699999999999999
Q ss_pred CHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 71 CFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 71 r~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++++|+..++++....|..+ ..+..+|.+++..| ++++|+..|++.+..
T Consensus 211 ~~~~A~~~~~~al~~~p~~~-----~a~~~lg~~~~~~g-~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 211 AFSAAIESCNKALELDSNNE-----KGLSRRGEAHLAVN-DFELARADFQKVLQL 259 (336)
T ss_dssp CHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcH-----HHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
Confidence 99999999999999987742 34446999999998 999999999999987
No 98
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.10 E-value=2.5e-09 Score=95.28 Aligned_cols=123 Identities=11% Similarity=0.140 Sum_probs=82.2
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHH------------HHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHAL------------CHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~hal------------ahvl~~ 68 (235)
.|+.++++..+++++...|+++.++..+|.++...|++++|++.+++++.++|+++.....+ +.++..
T Consensus 190 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (450)
T 2y4t_A 190 EGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIR 269 (450)
T ss_dssp TTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36667777777777777777777777777777777777777777777777777776666555 677777
Q ss_pred cCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.|++++|+..++++....|..+.+ ....+..++.++...| ++++|+..|++.+..
T Consensus 270 ~g~~~~A~~~~~~~l~~~p~~~~~-~~~~~~~l~~~~~~~g-~~~~A~~~~~~a~~~ 324 (450)
T 2y4t_A 270 DGRYTDATSKYESVMKTEPSIAEY-TVRSKERICHCFSKDE-KPVEAIRVCSEVLQM 324 (450)
T ss_dssp HTCHHHHHHHHHHHHHHCCSSHHH-HHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCcchHH-HHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHh
Confidence 777777777777776666553311 1223344677777776 777777777776654
No 99
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.10 E-value=7e-10 Score=95.97 Aligned_cols=122 Identities=10% Similarity=-0.035 Sum_probs=64.8
Q ss_pred CChhhHHHHHHhhcCCCCCC------hhHHHHHHHHHHHh-CCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQE------DFIFGILAFSLLEL-GQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQH 68 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~------~~~~g~~Af~L~e~-g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~ 68 (235)
|+.++++...++++...|.. ..++..+|.++... |++++|++.+++|+++.|++ +.++..+|.++..
T Consensus 91 g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 170 (292)
T 1qqe_A 91 GNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKAL 170 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHH
Confidence 55555666666665554421 23555555556554 66666666666666665544 3445555666666
Q ss_pred cCCHHHHHHHHHHchhhhccCCcc--hhHHHHHHHHHHHHhCCCCHHHHHHHHHhhch
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSSF--MYTHNWWHVALCYLEGHSPMRKVLEIYDNHIW 124 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~~--l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~ 124 (235)
+|++++|+..++++....|..+.. .....+-.++++++..| ++++|+..|++.+.
T Consensus 171 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~ 227 (292)
T 1qqe_A 171 DGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAAT-DAVAAARTLQEGQS 227 (292)
T ss_dssp TTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTT-CHHHHHHHHHGGGC
T ss_pred hCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHh
Confidence 666666666666665555443211 00012233555555555 56666666655554
No 100
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.09 E-value=1.5e-09 Score=80.74 Aligned_cols=99 Identities=12% Similarity=0.029 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHH
Q 026637 24 IFGILAFSLLELGQMSDAEEAAKKGLKINKHDC---WSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWH 100 (235)
Q Consensus 24 ~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da---wA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WH 100 (235)
.+...|..+...|++++|+..++++++.+|+++ .++..+|.++..+|++++|+..+++.....|..+. ....+..
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~--~~~~~~~ 81 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDK--AAGGLLK 81 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTT--HHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcc--cHHHHHH
Confidence 456788899999999999999999999999999 79999999999999999999999999999888532 1234456
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 101 VALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 101 lAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+|.+++..| ++++|+..|++.+..
T Consensus 82 la~~~~~~g-~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 82 LGLSQYGEG-KNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHcC-CHHHHHHHHHHHHHH
Confidence 999999998 999999999999876
No 101
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.09 E-value=2.9e-10 Score=93.21 Aligned_cols=92 Identities=15% Similarity=0.032 Sum_probs=85.3
Q ss_pred CCChhhHHHHHHhhcCCCCC-------Chh-----HHHHHHHHHHHhCCHHHHHHHHHHHHhh-------CCCCHHHH--
Q 026637 1 MGRPDLCFDIIHQVLPYNQQ-------EDF-----IFGILAFSLLELGQMSDAEEAAKKGLKI-------NKHDCWSQ-- 59 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~-------~~~-----~~g~~Af~L~e~g~~~~Ae~~arrAL~L-------~P~dawA~-- 59 (235)
.|++++++....+++..+|+ +.. ++.++|.++...|+|++|+..+++||++ +|+++.++
T Consensus 24 ~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~ 103 (159)
T 2hr2_A 24 AGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWIS 103 (159)
T ss_dssp HTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHH
Confidence 38999999999999999998 333 9999999999999999999999999999 99999999
Q ss_pred --HHHHHHHHHcCCHHHHHHHHHHchhhhccCCcc
Q 026637 60 --HALCHVLQHDCCFKEAVQFMEECSSTWSSCSSF 92 (235)
Q Consensus 60 --halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~ 92 (235)
.++|.++...||++||+..++++....|.+...
T Consensus 104 ~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~ 138 (159)
T 2hr2_A 104 AVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGE 138 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHH
Confidence 999999999999999999999999999887643
No 102
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.09 E-value=1.5e-09 Score=90.16 Aligned_cols=124 Identities=9% Similarity=-0.044 Sum_probs=106.1
Q ss_pred CCChhhHHHHHHhhcCCCCCCh---hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHH---HHHHHHHHHHH------
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED---FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCW---SQHALCHVLQH------ 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~---~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~daw---A~halahvl~~------ 68 (235)
.|+.++|....++++...|+++ .++..+|.++...|++++|++.++++++++|+++. ++..+|.++..
T Consensus 17 ~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~ 96 (225)
T 2yhc_A 17 DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSAL 96 (225)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC---
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhh
Confidence 3899999999999998888765 58899999999999999999999999999999985 78889988876
Q ss_pred ------------cCCHHHHHHHHHHchhhhccCCcchhH------------HHHHHHHHHHHhCCCCHHHHHHHHHhhch
Q 026637 69 ------------DCCFKEAVQFMEECSSTWSSCSSFMYT------------HNWWHVALCYLEGHSPMRKVLEIYDNHIW 124 (235)
Q Consensus 69 ------------~Gr~~egi~~l~~a~~~w~~~~~~l~~------------H~~WHlAL~~le~G~~~deAl~~yd~~i~ 124 (235)
+|++++|+..+++.....|+.+..... -....+|.+++..| ++++|+..|++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~-~~~~A~~~~~~~l~ 175 (225)
T 2yhc_A 97 QGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG-AWVAVVNRVEGMLR 175 (225)
T ss_dssp -----------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHH
T ss_pred hhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHHHHHHHHHHHHH
Confidence 689999999999999999986522110 01145788899998 99999999999998
Q ss_pred h
Q 026637 125 K 125 (235)
Q Consensus 125 ~ 125 (235)
.
T Consensus 176 ~ 176 (225)
T 2yhc_A 176 D 176 (225)
T ss_dssp H
T ss_pred H
Confidence 7
No 103
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.09 E-value=7.4e-10 Score=79.20 Aligned_cols=89 Identities=11% Similarity=0.022 Sum_probs=85.6
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-CCHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKH--DCWSQHALCHVLQHD-CCFKEAVQ 77 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~--dawA~halahvl~~~-Gr~~egi~ 77 (235)
.|+.++++...++++...|.++.++..+|.++...|++++|++.++++++++|+ ++.++..++.++... |++++|+.
T Consensus 19 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~ 98 (112)
T 2kck_A 19 AGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEI 98 (112)
T ss_dssp SCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHH
Confidence 489999999999999999999999999999999999999999999999999999 999999999999999 99999999
Q ss_pred HHHHchhhhccC
Q 026637 78 FMEECSSTWSSC 89 (235)
Q Consensus 78 ~l~~a~~~w~~~ 89 (235)
.+++.....|..
T Consensus 99 ~~~~~~~~~p~~ 110 (112)
T 2kck_A 99 AEARAKLEHHHH 110 (112)
T ss_dssp HHHHHGGGCCCC
T ss_pred HHHHHhhcccCC
Confidence 999999888764
No 104
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.09 E-value=5.7e-09 Score=85.81 Aligned_cols=99 Identities=12% Similarity=0.005 Sum_probs=89.0
Q ss_pred ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHH----------------HHHHHHHcCCHHHHHHHHHHchh
Q 026637 21 EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHA----------------LCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 21 ~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~ha----------------lahvl~~~Gr~~egi~~l~~a~~ 84 (235)
+...+...|..+.+.|++++|+..++++++++|+++.++.. +|.++..+|++++|+..++++..
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34456678888999999999999999999999999999999 99999999999999999999999
Q ss_pred hhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 85 TWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 85 ~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
..|..+ ..+..+|.+++..| ++++|+..|++.+..
T Consensus 83 ~~p~~~-----~~~~~lg~~~~~~g-~~~~A~~~~~~al~~ 117 (208)
T 3urz_A 83 KAPNNV-----DCLEACAEMQVCRG-QEKDALRMYEKILQL 117 (208)
T ss_dssp HCTTCH-----HHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HCCCCH-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHc
Confidence 998753 33445999999998 999999999999987
No 105
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.09 E-value=1e-09 Score=89.98 Aligned_cols=100 Identities=14% Similarity=0.150 Sum_probs=87.8
Q ss_pred ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCC-------C-----HHHHHHHHHHHHHcCCHHHHHHHHHHchhh---
Q 026637 21 EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKH-------D-----CWSQHALCHVLQHDCCFKEAVQFMEECSST--- 85 (235)
Q Consensus 21 ~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~-------d-----awA~halahvl~~~Gr~~egi~~l~~a~~~--- 85 (235)
..+.+...|..+...|+|++|++.+++||+++|+ + ++++.++|.++...||++||+..+++++..
T Consensus 10 ~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~ 89 (159)
T 2hr2_A 10 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR 89 (159)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhc
Confidence 3467778888999999999999999999999999 3 459999999999999999999999999999
Q ss_pred ----hccCCcchhHHHH----HHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 86 ----WSSCSSFMYTHNW----WHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 86 ----w~~~~~~l~~H~~----WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.|+. .-.| ...|.++..+| ++++|+..|++.|.-.
T Consensus 90 ~~e~~pd~-----~~A~~~~~~~rG~aL~~lg-r~eEAl~~y~kAlel~ 132 (159)
T 2hr2_A 90 RGELNQDE-----GKLWISAVYSRALALDGLG-RGAEAMPEFKKVVEMI 132 (159)
T ss_dssp HCCTTSTH-----HHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred cccCCCch-----HHHHHHHHHhHHHHHHHCC-CHHHHHHHHHHHHhcC
Confidence 7663 2233 46999999998 9999999999998764
No 106
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.08 E-value=4.4e-10 Score=97.32 Aligned_cols=90 Identities=11% Similarity=0.067 Sum_probs=85.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++|+...++++..+|+++.++..+|.++...|++++|++.+++|++++|+++.++..+|.++..+|++++|+..++
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 96 (281)
T 2c2l_A 17 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQ 96 (281)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCC
Q 026637 81 ECSSTWSSCS 90 (235)
Q Consensus 81 ~a~~~w~~~~ 90 (235)
++....|..+
T Consensus 97 ~al~l~p~~~ 106 (281)
T 2c2l_A 97 RAYSLAKEQR 106 (281)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHhCccch
Confidence 9988888653
No 107
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.08 E-value=6e-09 Score=91.87 Aligned_cols=204 Identities=13% Similarity=0.086 Sum_probs=137.1
Q ss_pred CCChhhHHHHHHhhcCCCCCCh----hHHHHHHHHHHHhCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcC
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED----FIFGILAFSLLELGQMSDAEEAAKKGLKI------NKHDCWSQHALCHVLQHDC 70 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~----~~~g~~Af~L~e~g~~~~Ae~~arrAL~L------~P~dawA~halahvl~~~G 70 (235)
.|+.++++..+++++...|+++ .++..+|..+...|++++|++.+++++++ +|..+.++..+|.++..+|
T Consensus 61 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 140 (411)
T 4a1s_A 61 AGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMG 140 (411)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCC
Confidence 4899999999999999999887 58899999999999999999999999999 7999999999999999999
Q ss_pred CHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCC-----------------HHHHHHHHHhhchhhhcCCCC
Q 026637 71 CFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSP-----------------MRKVLEIYDNHIWKELEKPDA 132 (235)
Q Consensus 71 r~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~-----------------~deAl~~yd~~i~~~~~~~~~ 132 (235)
++++|+..++++....+..+. ......+..+|.++...| + +++|++.|++.+..... .+
T Consensus 141 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~-~~- 217 (411)
T 4a1s_A 141 RFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKG-KHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRD-LG- 217 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH-HHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHH-HT-
T ss_pred CHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcC-cccccccchhhhhhhhHHHHHHHHHHHHHHHHHHH-cC-
Confidence 999999999999877543221 112345667999999998 9 99999999988765311 11
Q ss_pred CchHhHhHHHHHHHHHHh-cCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 026637 133 VHPEVYLNALGLLLRVYV-RGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSRH 208 (235)
Q Consensus 133 ~~~~~~~da~sLL~Rl~l-~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~ 208 (235)
.......+...+-++.+ .|....--.-.+..........+.......-......+...|+.+.+.+.++..-...
T Consensus 218 -~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 218 -DRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 11112222222222222 2221000011222222222211112212223344667778888888877776555444
No 108
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.08 E-value=3.4e-09 Score=96.29 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=109.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.++++..+++++...|+ +.++..+|..+...|++++|++..+++++++|+++.++..+|.++...|++++|+..++
T Consensus 256 ~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 334 (537)
T 3fp2_A 256 KNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQ 334 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 47889999999999999999 89999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+ ..+..+|.++...| ++++|+..|++.+..
T Consensus 335 ~a~~~~~~~~-----~~~~~la~~~~~~g-~~~~A~~~~~~~~~~ 373 (537)
T 3fp2_A 335 KAQSLNPENV-----YPYIQLACLLYKQG-KFTESEAFFNETKLK 373 (537)
T ss_dssp HHHHHCTTCS-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCH-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 9999987754 34556999999998 999999999999877
No 109
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.07 E-value=1.9e-09 Score=77.52 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=85.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.|+.+++....++++...|+++.++..+|.++...|++++|....+++++++|+++.++..+|.++...|++++|+..++
T Consensus 17 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 96 (118)
T 1elw_A 17 VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYE 96 (118)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccC
Q 026637 81 ECSSTWSSC 89 (235)
Q Consensus 81 ~a~~~w~~~ 89 (235)
++....|..
T Consensus 97 ~~~~~~~~~ 105 (118)
T 1elw_A 97 EGLKHEANN 105 (118)
T ss_dssp HHHTTCTTC
T ss_pred HHHHcCCCC
Confidence 999887764
No 110
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.07 E-value=4.9e-10 Score=85.85 Aligned_cols=88 Identities=9% Similarity=0.091 Sum_probs=82.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHHHHcCCHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC-------WSQHALCHVLQHDCCFK 73 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da-------wA~halahvl~~~Gr~~ 73 (235)
.|++++|+...++++..+|+++.++..+|.++.+.|+|++|++.+++|++++|++. .++..+|.++..+|+++
T Consensus 21 ~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~ 100 (127)
T 4gcn_A 21 QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLS 100 (127)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHH
Confidence 48999999999999999999999999999999999999999999999999999874 58889999999999999
Q ss_pred HHHHHHHHchhhhcc
Q 026637 74 EAVQFMEECSSTWSS 88 (235)
Q Consensus 74 egi~~l~~a~~~w~~ 88 (235)
+|+..++++....|+
T Consensus 101 ~A~~~~~kal~~~~~ 115 (127)
T 4gcn_A 101 LAVQWFHRSLSEFRD 115 (127)
T ss_dssp HHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhhCcC
Confidence 999999999887765
No 111
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.07 E-value=2.3e-09 Score=93.03 Aligned_cols=119 Identities=5% Similarity=-0.090 Sum_probs=105.3
Q ss_pred CCChhhHHHHHHhhcCCCCCChh-HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cCCHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDF-IFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH-DCCFKEAVQF 78 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~-~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~-~Gr~~egi~~ 78 (235)
.|+.++++...++++...|.++. ++..++-.+...|++++|++.+++|++++|.++..+...+..... .|++++|+..
T Consensus 112 ~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~A~~~ 191 (308)
T 2ond_A 112 RMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKI 191 (308)
T ss_dssp TTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 48899999999999999999886 899999999999999999999999999999998887766666443 7999999999
Q ss_pred HHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 79 MEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 79 l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++++....|..+ .+|-.++.++...| ++++|+.+|++.+..
T Consensus 192 ~~~al~~~p~~~-----~~~~~~~~~~~~~g-~~~~A~~~~~~al~~ 232 (308)
T 2ond_A 192 FELGLKKYGDIP-----EYVLAYIDYLSHLN-EDNNTRVLFERVLTS 232 (308)
T ss_dssp HHHHHHHHTTCH-----HHHHHHHHHHHTTC-CHHHHHHHHHHHHHS
T ss_pred HHHHHHhCCCcH-----HHHHHHHHHHHHCC-CHHHHHHHHHHHHhc
Confidence 999999988743 45666888898988 999999999999984
No 112
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.07 E-value=7.8e-10 Score=83.27 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=104.3
Q ss_pred CCChhhHHHHHHhhcCCCCCCh------hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED------FIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~------~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~ 68 (235)
.|++++++...++++...+... .++..+|..+...|++++|++.+++++++.|+. +.++..+|.++..
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 22 LGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 4889999999999998755322 588899999999999999999999999988765 7789999999999
Q ss_pred cCCHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+|++++|+..++++....+..+. ......+..+|.+++..| ++++|++.|++.+...
T Consensus 102 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~a~~~~ 159 (164)
T 3ro3_A 102 LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALG-NHDQAMHFAEKHLEIS 159 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHHHH
Confidence 99999999999999877654322 223345667999999998 9999999999988763
No 113
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.06 E-value=6.7e-09 Score=87.05 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=106.4
Q ss_pred CCChhhHHHHHHhhcCC--------CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY--------NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI--------NKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~--------~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L--------~P~dawA~halah 64 (235)
.|+.++++...++++.. .|....++..+|.++...|++++|+..+++++.+ +|..+.++..+|.
T Consensus 40 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 119 (311)
T 3nf1_A 40 QGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAV 119 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 48899999999999984 6677889999999999999999999999999998 5777899999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhh-----ccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 65 VLQHDCCFKEAVQFMEECSSTW-----SSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w-----~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++...|++++|+..++++.... +..+. ....+..+|.+++..| ++++|++.|++.+..
T Consensus 120 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~--~~~~~~~la~~~~~~~-~~~~A~~~~~~a~~~ 182 (311)
T 3nf1_A 120 LYGKRGKYKEAEPLCKRALEIREKVLGKDHPD--VAKQLNNLALLCQNQG-KYEEVEYYYQRALEI 182 (311)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHH--HHHHHHHHHHHHHTTT-CHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhcCCCChH--HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHH
Confidence 9999999999999999998875 22221 2345566999999998 999999999999876
No 114
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.06 E-value=1.1e-09 Score=90.99 Aligned_cols=122 Identities=7% Similarity=-0.009 Sum_probs=104.7
Q ss_pred CCChhhHHHHHHhhcCCCCCChh---HHHHHHHHHHH------------------hCCHHHHHHHHHHHHhhCCCCHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDF---IFGILAFSLLE------------------LGQMSDAEEAAKKGLKINKHDCWSQ 59 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~---~~g~~Af~L~e------------------~g~~~~Ae~~arrAL~L~P~dawA~ 59 (235)
+|+.++|+...++++..+|+++. ++.++|.++.+ .|++++|....+++++..|+++.+.
T Consensus 54 ~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 54 NADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred cCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 58999999999999999998774 78888888876 5799999999999999999999876
Q ss_pred -----------------HHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhh
Q 026637 60 -----------------HALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNH 122 (235)
Q Consensus 60 -----------------halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~ 122 (235)
..+|.++..+|++++|+..+++.....|..+.. .-.+-.++.++..+| ++++|++.|++.
T Consensus 134 ~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~--~~a~~~l~~~~~~~g-~~~~A~~~~~~l 210 (225)
T 2yhc_A 134 DATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQAT--RDALPLMENAYRQMQ-MNAQAEKVAKII 210 (225)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHH--HHHHHHHHHHHHHTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCcc--HHHHHHHHHHHHHcC-CcHHHHHHHHHH
Confidence 567889999999999999999999999885421 223445999999998 999999999866
Q ss_pred chh
Q 026637 123 IWK 125 (235)
Q Consensus 123 i~~ 125 (235)
+..
T Consensus 211 ~~~ 213 (225)
T 2yhc_A 211 AAN 213 (225)
T ss_dssp HHC
T ss_pred Hhh
Confidence 554
No 115
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.05 E-value=1.2e-09 Score=81.30 Aligned_cols=89 Identities=12% Similarity=-0.010 Sum_probs=84.8
Q ss_pred CCChhhHHHHHHhhcCCCCCCh---hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED---FIFGILAFSLLELGQMSDAEEAAKKGLKINKHD---CWSQHALCHVLQHDCCFKE 74 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~---~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d---awA~halahvl~~~Gr~~e 74 (235)
.|+++++...+++++..+|+++ .++..+|.++...|++++|+..+++++.++|++ +.++..+|.++..+|++++
T Consensus 15 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~ 94 (129)
T 2xev_A 15 NGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTE 94 (129)
T ss_dssp TTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHH
Confidence 4899999999999999999988 699999999999999999999999999999999 8999999999999999999
Q ss_pred HHHHHHHchhhhccC
Q 026637 75 AVQFMEECSSTWSSC 89 (235)
Q Consensus 75 gi~~l~~a~~~w~~~ 89 (235)
|+..+++.....|+.
T Consensus 95 A~~~~~~~~~~~p~~ 109 (129)
T 2xev_A 95 AQQTLQQVATQYPGS 109 (129)
T ss_dssp HHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHCCCC
Confidence 999999999998874
No 116
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.05 E-value=3.7e-09 Score=92.20 Aligned_cols=119 Identities=8% Similarity=-0.069 Sum_probs=100.3
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHH--HHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAF--SLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQF 78 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af--~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~ 78 (235)
+|+.++|...+++++..+|++....-..++ .+...|++++|++.++++++.+|+++.++.++|.++..+|++++|+..
T Consensus 143 ~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~ 222 (291)
T 3mkr_A 143 LDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGV 222 (291)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Confidence 599999999999999999988654433343 233458999999999999999999999999999999999999999999
Q ss_pred HHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHH-HHHHHHhhchh
Q 026637 79 MEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRK-VLEIYDNHIWK 125 (235)
Q Consensus 79 l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~de-Al~~yd~~i~~ 125 (235)
++++....|..+ ..+.+++.++...| ++++ +.+.+++.+..
T Consensus 223 l~~al~~~p~~~-----~~l~~l~~~~~~~g-~~~eaa~~~~~~~~~~ 264 (291)
T 3mkr_A 223 LQEALDKDSGHP-----ETLINLVVLSQHLG-KPPEVTNRYLSQLKDA 264 (291)
T ss_dssp HHHHHHHCTTCH-----HHHHHHHHHHHHTT-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCH-----HHHHHHHHHHHHcC-CCHHHHHHHHHHHHHh
Confidence 999999998754 34456999999998 6765 67888887766
No 117
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.05 E-value=1.2e-08 Score=85.53 Aligned_cols=204 Identities=12% Similarity=0.030 Sum_probs=136.6
Q ss_pred CCChhhHHHHHHhhcCCCCCCh----hHHHHHHHHHHHhCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcC
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED----FIFGILAFSLLELGQMSDAEEAAKKGLKI------NKHDCWSQHALCHVLQHDC 70 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~----~~~g~~Af~L~e~g~~~~Ae~~arrAL~L------~P~dawA~halahvl~~~G 70 (235)
.|++++++..+++++...|+++ .++..+|..+...|++++|++.+++++++ .|..+.++..+|.++...|
T Consensus 18 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 97 (338)
T 3ro2_A 18 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 97 (338)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc
Confidence 4899999999999999999884 67889999999999999999999999999 7777899999999999999
Q ss_pred CHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCC--------------------HHHHHHHHHhhchhhhcC
Q 026637 71 CFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSP--------------------MRKVLEIYDNHIWKELEK 129 (235)
Q Consensus 71 r~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~--------------------~deAl~~yd~~i~~~~~~ 129 (235)
++++|+..++++....+..+. ......+..+|.++...| + +++|++.|++.+.... +
T Consensus 98 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~-~ 175 (338)
T 3ro2_A 98 NFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKG-KSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVT-A 175 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH-HTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcC-cccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHH-h
Confidence 999999999999887665432 122345667999999998 9 9999999998876531 1
Q ss_pred CCCCchHhHhHHHHHHHHHHh-cCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 026637 130 PDAVHPEVYLNALGLLLRVYV-RGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSRH 208 (235)
Q Consensus 130 ~~~~~~~~~~da~sLL~Rl~l-~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~ 208 (235)
.+ .......+...+-++.+ .|....--.-.+...+......+.......-......+...|+.+.+...++..-...
T Consensus 176 ~~--~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 253 (338)
T 3ro2_A 176 LG--DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 253 (338)
T ss_dssp HT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 11 11112222222222222 1221000111222222222111122222233444566777888888877766554443
No 118
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.04 E-value=6.8e-10 Score=87.09 Aligned_cols=89 Identities=12% Similarity=0.115 Sum_probs=84.2
Q ss_pred CCChhhHHHHHHhhcCC------------------CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY------------------NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHAL 62 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~------------------~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~hal 62 (235)
.|++++|+....+++.. .|.+..++..+|.++...|+|++|+..+++||+++|+++.++..+
T Consensus 24 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 103 (162)
T 3rkv_A 24 QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRR 103 (162)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 48899999999999998 667778999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHchhhhccC
Q 026637 63 CHVLQHDCCFKEAVQFMEECSSTWSSC 89 (235)
Q Consensus 63 ahvl~~~Gr~~egi~~l~~a~~~w~~~ 89 (235)
|.++...|++++|+..++++....|..
T Consensus 104 g~~~~~~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 104 AKARIAAWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHhcHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999998874
No 119
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.04 E-value=1.2e-09 Score=88.53 Aligned_cols=115 Identities=16% Similarity=-0.003 Sum_probs=96.7
Q ss_pred CCChhhHHHHHHhhcCCCCCCh----------------hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED----------------FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~----------------~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halah 64 (235)
.|++++|+....+++...|.++ .++..+|.++...|++++|+..+++++.++|+++.++..+|.
T Consensus 51 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 130 (198)
T 2fbn_A 51 KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGV 130 (198)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4899999999999999999887 899999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHH-HHHHh
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVL-EIYDN 121 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl-~~yd~ 121 (235)
++...|++++|+..++++....|..+ -.+..++.++...| +++++. ..|.+
T Consensus 131 ~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~~-~~~~~~~~~~~~ 182 (198)
T 2fbn_A 131 ANMYFGFLEEAKENLYKAASLNPNNL-----DIRNSYELCVNKLK-EARKKDKLTFGG 182 (198)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSTTCH-----HHHHHHHHHHHHHH-HHHC--------
T ss_pred HHHHcccHHHHHHHHHHHHHHCCCcH-----HHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 99999999999999999999987743 23344777777776 666666 34433
No 120
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.04 E-value=2.9e-09 Score=95.79 Aligned_cols=124 Identities=8% Similarity=-0.025 Sum_probs=112.3
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.++++..+++++...|.++.++..+|..+...|++++|+...+++++++|+++.++..+|.++...|++++|+..++
T Consensus 317 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 396 (514)
T 2gw1_A 317 LQNYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYD 396 (514)
T ss_dssp TTCTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HchhhhccCCcchh-HHHHHHHHHHHHh---CCCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMY-THNWWHVALCYLE---GHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~-~H~~WHlAL~~le---~G~~~deAl~~yd~~i~~ 125 (235)
++....|..+.... ...+..+|.+++. .| ++++|+..|++.+..
T Consensus 397 ~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~A~~~~~~a~~~ 444 (514)
T 2gw1_A 397 LAIELENKLDGIYVGIAPLVGKATLLTRNPTVE-NFIEATNLLEKASKL 444 (514)
T ss_dssp HHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTT-HHHHHHHHHHHHHHH
T ss_pred HHHHhhhccchHHHHHHHHHHHHHHHhhhhhcC-CHHHHHHHHHHHHHh
Confidence 99998888653100 1245569999999 88 999999999999876
No 121
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.04 E-value=1.4e-09 Score=80.56 Aligned_cols=85 Identities=15% Similarity=0.001 Sum_probs=79.4
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
..++..+++++..+|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++..+|++++|+..++++..
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 81 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLA 81 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 35788899999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhccC
Q 026637 85 TWSSC 89 (235)
Q Consensus 85 ~w~~~ 89 (235)
..|..
T Consensus 82 ~~~~~ 86 (115)
T 2kat_A 82 AAQSR 86 (115)
T ss_dssp HHHHH
T ss_pred hcccc
Confidence 87663
No 122
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.04 E-value=4e-09 Score=80.91 Aligned_cols=99 Identities=9% Similarity=0.039 Sum_probs=90.0
Q ss_pred ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHH
Q 026637 21 EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWH 100 (235)
Q Consensus 21 ~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WH 100 (235)
.+..+..+|..+...|++++|...++++++++|+++.++..+|.++...|++++|+..++++....|..+ ..+..
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~-----~~~~~ 86 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI-----KGYYR 86 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH-----HHHHH
Confidence 3467888999999999999999999999999999999999999999999999999999999999987642 34556
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 101 VALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 101 lAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+|.++...| ++++|+..|++.+..
T Consensus 87 ~a~~~~~~~-~~~~A~~~~~~a~~~ 110 (166)
T 1a17_A 87 RAASNMALG-KFRAALRDYETVVKV 110 (166)
T ss_dssp HHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-cHHHHHHHHHHHHHh
Confidence 999999998 999999999999876
No 123
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.03 E-value=1.3e-09 Score=94.35 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=106.2
Q ss_pred CCChhhHHHHHHhhcCCCC------CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQ------QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p------~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~ 68 (235)
.|+.++++...++++...+ ..+.++..+|.++...|++++|+...++|+++.|+. +.++..+|.++..
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 129 (292)
T 1qqe_A 50 RKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILEN 129 (292)
T ss_dssp TTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 4889999999999998743 235788999999999999999999999999999875 5789999999999
Q ss_pred c-CCHHHHHHHHHHchhhhccCCcch-hHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 69 D-CCFKEAVQFMEECSSTWSSCSSFM-YTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 69 ~-Gr~~egi~~l~~a~~~w~~~~~~l-~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+ |++++|+..++++....|..+... ....+-.+|.+++..| +|++|+..|++.+...
T Consensus 130 ~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~ 188 (292)
T 1qqe_A 130 DLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDG-QYIEASDIYSKLIKSS 188 (292)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTT
T ss_pred hhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHH
Confidence 7 999999999999999988643211 1223456899999998 9999999999999863
No 124
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.03 E-value=3.6e-09 Score=91.57 Aligned_cols=102 Identities=7% Similarity=-0.068 Sum_probs=92.4
Q ss_pred CCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHH
Q 026637 19 QQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNW 98 (235)
Q Consensus 19 p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~ 98 (235)
|.++..+..+|..+...|+|++|++.+++|++++|+++.++.++|.++..+|++++|+..++++....|..+ ..+
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~ 75 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSV-----KAH 75 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH-----HHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH-----HHH
Confidence 567788999999999999999999999999999999999999999999999999999999999999987632 334
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 99 WHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 99 WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
..+|.++...| ++++|+..|.+.+...
T Consensus 76 ~~lg~~~~~~g-~~~~A~~~~~~al~l~ 102 (281)
T 2c2l_A 76 FFLGQCQLEME-SYDEAIANLQRAYSLA 102 (281)
T ss_dssp HHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-CHHHHHHHHHHHHHhC
Confidence 45999999998 9999999999988764
No 125
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=4.4e-09 Score=79.18 Aligned_cols=89 Identities=18% Similarity=0.128 Sum_probs=85.2
Q ss_pred CCChhhHHHHHHhhcCCCCCC---hhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQE---DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQ 77 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~---~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~ 77 (235)
.|+++++....++++...|++ +.++..+|.++...|++++|+..+++++.++|+++.++..+|.++...|++++|+.
T Consensus 41 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 120 (148)
T 2dba_A 41 CGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVL 120 (148)
T ss_dssp TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHH
Confidence 489999999999999999987 88999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHchhhhccC
Q 026637 78 FMEECSSTWSSC 89 (235)
Q Consensus 78 ~l~~a~~~w~~~ 89 (235)
.++++....|..
T Consensus 121 ~~~~al~~~p~~ 132 (148)
T 2dba_A 121 DLQRCVSLEPKN 132 (148)
T ss_dssp HHHHHHHHCSSC
T ss_pred HHHHHHHcCCCc
Confidence 999999998774
No 126
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.02 E-value=3e-09 Score=84.55 Aligned_cols=124 Identities=11% Similarity=0.010 Sum_probs=101.2
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHh------hCCCCHHHHHHHHHHHHHcCCHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLK------INKHDCWSQHALCHVLQHDCCFKE 74 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~------L~P~dawA~halahvl~~~Gr~~e 74 (235)
.|+.+++...++.+....+..+.++..+|..+...|++++|+..++++++ ..|..+.++..+|.++..+|++++
T Consensus 5 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 84 (203)
T 3gw4_A 5 AHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDA 84 (203)
T ss_dssp --CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHH
Confidence 37888888844444333336788999999999999999999999999999 677788999999999999999999
Q ss_pred HHHHHHHchhhhccCC-cc-hhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 75 AVQFMEECSSTWSSCS-SF-MYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 75 gi~~l~~a~~~w~~~~-~~-l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
|+..++++.......+ .. .....+..+|..++..| ++++|++.|++.+..
T Consensus 85 A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 85 ARRCFLEERELLASLPEDPLAASANAYEVATVALHFG-DLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHH
Confidence 9999999988754433 11 23456667999999998 999999999988765
No 127
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.02 E-value=7.5e-09 Score=91.67 Aligned_cols=199 Identities=11% Similarity=0.135 Sum_probs=132.2
Q ss_pred CCChhhHHHHHHhhcCCCCC-------ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQ-------EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC------WSQHALCHVLQ 67 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~-------~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da------wA~halahvl~ 67 (235)
+|+.+.++...++++...+. ...++..+|.++...|++++|++.+++|+++.|+.. .+++++|.++.
T Consensus 156 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 235 (383)
T 3ulq_A 156 MKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKN 235 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 58899999999999986432 346899999999999999999999999999977654 69999999999
Q ss_pred HcCCHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHH
Q 026637 68 HDCCFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLL 146 (235)
Q Consensus 68 ~~Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~ 146 (235)
.+|++++|+..++++....+..+. ......+-.+|.+++..| ++++|+..|++.+.... +.+ .. ........|-
T Consensus 236 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~A~~~~~~al~~~~-~~~--~~-~~~~~~~~l~ 310 (383)
T 3ulq_A 236 SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLG-KIDKAHEYHSKGMAYSQ-KAG--DV-IYLSEFEFLK 310 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHH-HHT--CH-HHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHH-HcC--CH-HHHHHHHHHH
Confidence 999999999999999885433221 112445567999999998 99999999999987642 111 11 1112223333
Q ss_pred HHHhcCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHH
Q 026637 147 RVYVRGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSR 207 (235)
Q Consensus 147 Rl~l~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~ 207 (235)
.+...-.+ .+..+...+........+...-.-......+...|+.+.+....+..-..
T Consensus 311 ~~~~~~~~---~~~~~~al~~~~~~~~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~~ 368 (383)
T 3ulq_A 311 SLYLSGPD---EEAIQGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQV 368 (383)
T ss_dssp HHHTSSCC---HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCCc---HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 33332111 02244444444433222221212223455566677777666655544443
No 128
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.99 E-value=3.1e-08 Score=86.07 Aligned_cols=204 Identities=12% Similarity=0.027 Sum_probs=137.1
Q ss_pred CCChhhHHHHHHhhcCCCCCCh----hHHHHHHHHHHHhCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHHcC
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED----FIFGILAFSLLELGQMSDAEEAAKKGLKI------NKHDCWSQHALCHVLQHDC 70 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~----~~~g~~Af~L~e~g~~~~Ae~~arrAL~L------~P~dawA~halahvl~~~G 70 (235)
.|++++++...++++...|+++ .++..+|..+...|++++|+..+++|+++ .|..+.++..+|.++...|
T Consensus 22 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 101 (406)
T 3sf4_A 22 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 101 (406)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcC
Confidence 4899999999999999999885 57889999999999999999999999998 6677899999999999999
Q ss_pred CHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCC--------------------HHHHHHHHHhhchhhhcC
Q 026637 71 CFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSP--------------------MRKVLEIYDNHIWKELEK 129 (235)
Q Consensus 71 r~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~--------------------~deAl~~yd~~i~~~~~~ 129 (235)
++++|+..++++....+..+. ......+..+|.++...| + +++|++.|++.+.... +
T Consensus 102 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g-~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~-~ 179 (406)
T 3sf4_A 102 NFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKG-KSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVT-A 179 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH-HTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcC-CcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHH-h
Confidence 999999999999887765332 112345667999999998 9 9999999999887532 1
Q ss_pred CCCCchHhHhHHHHHHHHHHh-cCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 026637 130 PDAVHPEVYLNALGLLLRVYV-RGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSRH 208 (235)
Q Consensus 130 ~~~~~~~~~~da~sLL~Rl~l-~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~ 208 (235)
.+ .......+...+-.+.. .|....--.-.+..........+.......-......+...|+.+.+...++..-...
T Consensus 180 ~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 257 (406)
T 3sf4_A 180 LG--DRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLA 257 (406)
T ss_dssp TT--CHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred cc--CcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHH
Confidence 11 11122222222222222 1221000112222222222211122212223344566778888888877766555443
No 129
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.98 E-value=5e-10 Score=83.72 Aligned_cols=87 Identities=11% Similarity=0.019 Sum_probs=74.9
Q ss_pred HhCCHHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCC
Q 026637 34 ELGQMSDAEEAAKKGLKI---NKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHS 110 (235)
Q Consensus 34 e~g~~~~Ae~~arrAL~L---~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~ 110 (235)
..|++++|+..+++|+++ +|+++.++..+|.++..+|++++|+..++++....|..+ ..+..+|.++...|
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~-----~~~~~l~~~~~~~g- 75 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ-----ALRVFYAMVLYNLG- 75 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHT-
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch-----HHHHHHHHHHHHcC-
Confidence 468999999999999999 699999999999999999999999999999999998843 34445999999998
Q ss_pred CHHHHHHHHHhhchhh
Q 026637 111 PMRKVLEIYDNHIWKE 126 (235)
Q Consensus 111 ~~deAl~~yd~~i~~~ 126 (235)
++++|++.|++.+...
T Consensus 76 ~~~~A~~~~~~al~~~ 91 (117)
T 3k9i_A 76 RYEQGVELLLKIIAET 91 (117)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999999874
No 130
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.98 E-value=1.2e-09 Score=91.78 Aligned_cols=124 Identities=13% Similarity=0.094 Sum_probs=105.5
Q ss_pred CCChhhHHHHHHhhcCCC--------CCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYN--------QQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI--------NKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~--------p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L--------~P~dawA~halah 64 (235)
+|+.++++..+++++... |....++..+|.++...|++++|++.+++++.+ +|..+.++..+|.
T Consensus 124 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~ 203 (311)
T 3nf1_A 124 RGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLAS 203 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 588999999999999763 667788999999999999999999999999999 8888999999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhccC--------------------------------------------CcchhHHHHHH
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSSC--------------------------------------------SSFMYTHNWWH 100 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~~--------------------------------------------~~~l~~H~~WH 100 (235)
++..+|++++|+..++++....+.. ........+..
T Consensus 204 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 283 (311)
T 3nf1_A 204 CYLKQGKFKQAETLYKEILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKN 283 (311)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHH
Confidence 9999999999999999998754320 00112345667
Q ss_pred HHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 101 VALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 101 lAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+|.++...| ++++|++.|++.+..
T Consensus 284 la~~~~~~g-~~~~A~~~~~~al~l 307 (311)
T 3nf1_A 284 LGALYRRQG-KFEAAETLEEAAMRS 307 (311)
T ss_dssp HHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHCC-CHHHHHHHHHHHHHH
Confidence 999999998 999999999998876
No 131
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.97 E-value=6.7e-10 Score=89.95 Aligned_cols=99 Identities=8% Similarity=0.007 Sum_probs=89.3
Q ss_pred ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 21 EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC----------------WSQHALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 21 ~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da----------------wA~halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
....+...|..+...|+|++|+..+++++.+.|+++ .++..+|.++...|++++|+..++++..
T Consensus 37 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 37 SAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 456788899999999999999999999999999998 9999999999999999999999999999
Q ss_pred hhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 85 TWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 85 ~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
..|..+ ..+..+|.+++..| ++++|+..|.+.+..
T Consensus 117 ~~p~~~-----~~~~~lg~~~~~~~-~~~~A~~~~~~al~~ 151 (198)
T 2fbn_A 117 IDKNNV-----KALYKLGVANMYFG-FLEEAKENLYKAASL 151 (198)
T ss_dssp HSTTCH-----HHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred hCcccH-----HHHHHHHHHHHHcc-cHHHHHHHHHHHHHH
Confidence 987642 34446999999998 999999999999876
No 132
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.97 E-value=1.3e-08 Score=89.59 Aligned_cols=204 Identities=12% Similarity=0.029 Sum_probs=136.6
Q ss_pred CCChhhHHHHHHhhcCC------CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY------NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI------NKHDCWSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~------~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L------~P~dawA~halahvl~~ 68 (235)
+|+.++++..+++++.. .|....++..+|..+...|++++|++.+++++++ .|..+.++..+|.++..
T Consensus 99 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 178 (411)
T 4a1s_A 99 LGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHA 178 (411)
T ss_dssp HTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHH
Confidence 38899999999999886 4667789999999999999999999999999999 78889999999999999
Q ss_pred cCC-----------------HHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCC
Q 026637 69 DCC-----------------FKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKP 130 (235)
Q Consensus 69 ~Gr-----------------~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~ 130 (235)
+|+ +++++..++++....+..+. ......+..+|.+++..| ++++|+..|++.+.... +.
T Consensus 179 ~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~-~~ 256 (411)
T 4a1s_A 179 KGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLG-DFQAAIEHHQERLRIAR-EF 256 (411)
T ss_dssp HHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHH-HH
T ss_pred cCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHH-hc
Confidence 999 99999999998766543221 112346667999999998 99999999999887642 11
Q ss_pred CCCchHhHhHHHHHHHHHHhc-CcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 026637 131 DAVHPEVYLNALGLLLRVYVR-GELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSRH 208 (235)
Q Consensus 131 ~~~~~~~~~da~sLL~Rl~l~-G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~ 208 (235)
+ .......+...+-++.+. |....--.-.+..........+.......-......+...|+.+.+.+.++..-...
T Consensus 257 ~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 333 (411)
T 4a1s_A 257 G--DRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIA 333 (411)
T ss_dssp T--CHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred C--CcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 1 111122233333333322 211000011222222222111111212223344566778899888887776655544
No 133
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.97 E-value=4.8e-08 Score=85.64 Aligned_cols=124 Identities=9% Similarity=0.022 Sum_probs=98.1
Q ss_pred CCChhhHHHHHHhhcCCC--------CCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYN--------QQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD-----CWSQHALCHVLQ 67 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~--------p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d-----awA~halahvl~ 67 (235)
.|++++++..+++++... |....++.++|.++.+.|++++|++.+++++++.|.. ..++..++.++.
T Consensus 106 ~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~ 185 (373)
T 1hz4_A 106 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSL 185 (373)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHH
Confidence 489999999999998754 3355788889999999999999999999999998863 467889999999
Q ss_pred HcCCHHHHHHHHHHchhhhccCCcchhHHHHHH--HHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 68 HDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWH--VALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 68 ~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WH--lAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.+|++++|+..++++....+..+.......... .+..++..| ++++|...+++.+.+
T Consensus 186 ~~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~A~~~~~~a~~~ 244 (373)
T 1hz4_A 186 ARGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTG-DKAAAANWLRHTAKP 244 (373)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHSCCC
T ss_pred HcCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCC-CHHHHHHHHHhCCCC
Confidence 999999999999999887655321101111111 233467888 999999999998876
No 134
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.96 E-value=4.8e-10 Score=81.07 Aligned_cols=100 Identities=10% Similarity=-0.018 Sum_probs=82.5
Q ss_pred ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcc-hhHHHHH
Q 026637 21 EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSF-MYTHNWW 99 (235)
Q Consensus 21 ~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~-l~~H~~W 99 (235)
++..+..+|..+...|++++|++.+++|++++|+++.++..+|.++..+|++++|+..++++....|..+.. .....+.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 356778899999999999999999999999999999999999999999999999999999999998874221 1123445
Q ss_pred HHHHHHHhCCCCHHHHHHHHHh
Q 026637 100 HVALCYLEGHSPMRKVLEIYDN 121 (235)
Q Consensus 100 HlAL~~le~G~~~deAl~~yd~ 121 (235)
.++.++...| +++++++.|++
T Consensus 83 ~~~~~~~~~~-~~~~a~~~~~~ 103 (111)
T 2l6j_A 83 RLELAQGAVG-SVQIPVVEVDE 103 (111)
T ss_dssp HHHHHHHHHH-CCCCCSSSSSS
T ss_pred HHHHHHHHHH-hHhhhHhHHHH
Confidence 6788887777 77777766543
No 135
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.95 E-value=2e-07 Score=78.26 Aligned_cols=113 Identities=11% Similarity=0.012 Sum_probs=93.4
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHH----hCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLE----LGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH----DCCF 72 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e----~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~----~Gr~ 72 (235)
.|+.++++...++++. |+++.++..+|..+.. .|++++|.+.+++|++++ ++.++..+|.++.. .|++
T Consensus 19 ~~~~~~A~~~~~~a~~--~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~ 94 (273)
T 1ouv_A 19 EKDFTQAKKYFEKACD--LKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNT 94 (273)
T ss_dssp TTCHHHHHHHHHHHHH--TTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCH
T ss_pred CCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCH
Confidence 3788888889988887 7788888889999988 999999999999998885 88899999999998 9999
Q ss_pred HHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHh----CCCCHHHHHHHHHhhchh
Q 026637 73 KEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLE----GHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 73 ~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le----~G~~~deAl~~yd~~i~~ 125 (235)
++|+.+++++.... + ...+..+|.++.. .| ++++|++.|++.+..
T Consensus 95 ~~A~~~~~~a~~~~---~----~~a~~~lg~~~~~~~~~~~-~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 95 NKALQYYSKACDLK---Y----AEGCASLGGIYHDGKVVTR-DFKKAVEYFTKACDL 143 (273)
T ss_dssp HHHHHHHHHHHHTT---C----HHHHHHHHHHHHHCSSSCC-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcC---C----ccHHHHHHHHHHcCCCccc-CHHHHHHHHHHHHhc
Confidence 99999999887762 1 1233358888887 77 899999999888865
No 136
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.95 E-value=5.2e-10 Score=91.60 Aligned_cols=87 Identities=15% Similarity=0.040 Sum_probs=80.2
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCH----------HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQM----------SDAEEAAKKGLKINKHDCWSQHALCHVLQHDC- 70 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~----------~~Ae~~arrAL~L~P~dawA~halahvl~~~G- 70 (235)
+++++++...++++..+|+++.++..+|.+|.+.+++ ++|+..+++||+++|+++.++.++|.++..+|
T Consensus 16 ~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~ 95 (158)
T 1zu2_A 16 LLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAF 95 (158)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcc
Confidence 4578899999999999999999999999999999875 59999999999999999999999999999885
Q ss_pred ----------CHHHHHHHHHHchhhhcc
Q 026637 71 ----------CFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 71 ----------r~~egi~~l~~a~~~w~~ 88 (235)
++++|+..++++....|.
T Consensus 96 l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 96 LTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred cCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 899999999999999877
No 137
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.94 E-value=1.7e-08 Score=73.45 Aligned_cols=97 Identities=13% Similarity=0.222 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHH
Q 026637 23 FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVA 102 (235)
Q Consensus 23 ~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlA 102 (235)
.++..+|..+...|++++|+...++++.++|+++.++..++.++...|++++++..+++.....|..+ ..+..++
T Consensus 2 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~-----~~~~~l~ 76 (136)
T 2fo7_A 2 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSA-----EAWYNLG 76 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH-----HHHHHHH
T ss_pred cHHHHHHHHHHHcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCch-----HHHHHHH
Confidence 35677888999999999999999999999999999999999999999999999999999998876632 3445689
Q ss_pred HHHHhCCCCHHHHHHHHHhhchh
Q 026637 103 LCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 103 L~~le~G~~~deAl~~yd~~i~~ 125 (235)
..+...| ++++|+..|++.+..
T Consensus 77 ~~~~~~~-~~~~A~~~~~~~~~~ 98 (136)
T 2fo7_A 77 NAYYKQG-DYDEAIEYYQKALEL 98 (136)
T ss_dssp HHHHTTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHhc-CHHHHHHHHHHHHHh
Confidence 9999998 999999999998875
No 138
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.94 E-value=3.9e-09 Score=97.90 Aligned_cols=119 Identities=16% Similarity=0.098 Sum_probs=101.3
Q ss_pred CCChhhHHHHHHhhcCCCCCC---------------hhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQE---------------DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHV 65 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~---------------~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahv 65 (235)
.|++++|+...++++...|.+ ..++.++|.++...|+|++|+..+++||+++|+++.++..+|.+
T Consensus 281 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a 360 (457)
T 1kt0_A 281 GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA 360 (457)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 489999999999999999988 58999999999999999999999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHH-HHHHhhchh
Q 026637 66 LQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVL-EIYDNHIWK 125 (235)
Q Consensus 66 l~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl-~~yd~~i~~ 125 (235)
+..+|++++|+..++++....|... -.+..++.++...| +++++. .+|.+.+..
T Consensus 361 ~~~~g~~~~A~~~~~~al~l~P~~~-----~a~~~l~~~~~~~~-~~~~a~~~~~~~~f~k 415 (457)
T 1kt0_A 361 QLLMNEFESAKGDFEKVLEVNPQNK-----AARLQISMCQKKAK-EHNERDRRIYANMFKK 415 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHTTC---------CHHHHHHHHHHHHH-HHHHHHHHHHHHC---
T ss_pred HHHccCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHhh
Confidence 9999999999999999999988743 24556888888887 788776 455555443
No 139
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.92 E-value=2.6e-08 Score=86.55 Aligned_cols=206 Identities=11% Similarity=-0.017 Sum_probs=132.5
Q ss_pred CCChhhHHHHHHhhcCCCCCC------hhHHHHHHHHHHHhCC--------------------HHHHHHHHHHHHhh---
Q 026637 1 MGRPDLCFDIIHQVLPYNQQE------DFIFGILAFSLLELGQ--------------------MSDAEEAAKKGLKI--- 51 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~------~~~~g~~Af~L~e~g~--------------------~~~Ae~~arrAL~L--- 51 (235)
+|+.++++...++++...|.. ..++..+|.++...|+ +++|++.+++++.+
T Consensus 100 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~ 179 (406)
T 3sf4_A 100 LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTA 179 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 488888999888888875532 4588888999999999 99999999999988
Q ss_pred ---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhh
Q 026637 52 ---NKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKEL 127 (235)
Q Consensus 52 ---~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~ 127 (235)
.|..+.++..+|.++..+|++++|+..++++....+..+. ......+..+|.+++..| ++++|+..|++.+....
T Consensus 180 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~~ 258 (406)
T 3sf4_A 180 LGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLG-EFETASEYYKKTLLLAR 258 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHH
Confidence 6666788999999999999999999999999887766442 112235566899999998 89999999999886632
Q ss_pred cCCCCCchHhHhHHHHHHHHHHhc-CcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHH
Q 026637 128 EKPDAVHPEVYLNALGLLLRVYVR-GELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKS 206 (235)
Q Consensus 128 ~~~~~~~~~~~~da~sLL~Rl~l~-G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~ 206 (235)
+.+ .......+...+-++... |....--.-.+..........+.......-......+...|+.+.+.+.++..-.
T Consensus 259 -~~~--~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 335 (406)
T 3sf4_A 259 -QLK--DRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 335 (406)
T ss_dssp -HTT--CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -hCc--CchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 111 122223333333333322 2210000111222222111111111122233445666778898888887776666
Q ss_pred Hhhc
Q 026637 207 RHSK 210 (235)
Q Consensus 207 ~~~~ 210 (235)
....
T Consensus 336 ~~~~ 339 (406)
T 3sf4_A 336 ISRE 339 (406)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 140
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.92 E-value=8.8e-09 Score=91.22 Aligned_cols=124 Identities=9% Similarity=0.061 Sum_probs=105.3
Q ss_pred CCChhhHHHHHHhhcCC---CC---CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCC-------CCHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY---NQ---QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINK-------HDCWSQHALCHVLQ 67 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~---~p---~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P-------~dawA~halahvl~ 67 (235)
.|+.++|+...++++.. .+ ..+.++..+|.++...|++++|...+++|+++.| ..+.++..+|.++.
T Consensus 116 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~ 195 (383)
T 3ulq_A 116 QREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFL 195 (383)
T ss_dssp TTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHH
Confidence 48999999999999986 23 3558999999999999999999999999999944 44579999999999
Q ss_pred HcCCHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 68 HDCCFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 68 ~~Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.+|++++|+..++++....+..+. ......+..+|.++...| ++++|++.|.+.+.-
T Consensus 196 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g-~~~~A~~~~~~al~~ 253 (383)
T 3ulq_A 196 DLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQS-QYEDAIPYFKRAIAV 253 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
Confidence 999999999999999887665432 222335667999999998 999999999999985
No 141
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.92 E-value=9.6e-09 Score=80.44 Aligned_cols=98 Identities=9% Similarity=-0.016 Sum_probs=88.3
Q ss_pred hhHHHHHHHHHHHhCCHHHHHHHHHHHHhh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHch
Q 026637 22 DFIFGILAFSLLELGQMSDAEEAAKKGLKI------------------NKHDCWSQHALCHVLQHDCCFKEAVQFMEECS 83 (235)
Q Consensus 22 ~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L------------------~P~dawA~halahvl~~~Gr~~egi~~l~~a~ 83 (235)
...+...|..+...|+|++|+..+++|+.+ +|.++.++.++|.++...|++++|+..+++++
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 456778889999999999999999999999 88888999999999999999999999999999
Q ss_pred hhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 84 STWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 84 ~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
...|..+ ..+..+|.+++..| ++++|+..|.+.+..
T Consensus 91 ~~~p~~~-----~a~~~~g~~~~~~g-~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 91 KREETNE-----KALFRRAKARIAAW-KLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHSTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred hcCCcch-----HHHHHHHHHHHHHh-cHHHHHHHHHHHHhc
Confidence 9987742 34456999999998 999999999999887
No 142
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.91 E-value=3.5e-07 Score=76.74 Aligned_cols=178 Identities=12% Similarity=-0.023 Sum_probs=128.7
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHH----hCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLE----LGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH----DCCF 72 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e----~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~----~Gr~ 72 (235)
.|+.++++...++++... ++.++..+|..+.. .+++++|++..++|+++ +++.++..+|.++.. .|++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~ 130 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDF 130 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCH
Confidence 478899999999999874 88999999999999 99999999999999998 499999999999999 9999
Q ss_pred HHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHh----CCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHH
Q 026637 73 KEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLE----GHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRV 148 (235)
Q Consensus 73 ~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le----~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl 148 (235)
++|+.+++++....+. ..+..++.++.. .+ ++++|+..|++.+... . .++...|-.+
T Consensus 131 ~~A~~~~~~a~~~~~~-------~a~~~lg~~~~~~~~~~~-~~~~A~~~~~~a~~~~-------~----~~a~~~lg~~ 191 (273)
T 1ouv_A 131 KKAVEYFTKACDLNDG-------DGCTILGSLYDAGRGTPK-DLKKALASYDKACDLK-------D----SPGCFNAGNM 191 (273)
T ss_dssp HHHHHHHHHHHHTTCH-------HHHHHHHHHHHHTSSSCC-CHHHHHHHHHHHHHTT-------C----HHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcH-------HHHHHHHHHHHcCCCCCC-CHHHHHHHHHHHHHCC-------C----HHHHHHHHHH
Confidence 9999999999886421 233358999987 77 9999999999988652 1 2333444444
Q ss_pred HhcCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhc----CCCchHHHHHHHHH
Q 026637 149 YVRGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALAN----TGEVSKAEDLLKGL 204 (235)
Q Consensus 149 ~l~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~----ag~~~~~~~ll~~~ 204 (235)
...|..+ ..+.+.-...+..-..... +-.-......+.. .++.+.+.+.++..
T Consensus 192 ~~~g~~~--~~~~~~A~~~~~~a~~~~~-~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a 248 (273)
T 1ouv_A 192 YHHGEGA--TKNFKEALARYSKACELEN-GGGCFNLGAMQYNGEGVTRNEKQAIENFKKG 248 (273)
T ss_dssp HHHTCSS--CCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHH
T ss_pred HHcCCCC--CccHHHHHHHHHHHHhCCC-HHHHHHHHHHHHcCCCcccCHHHHHHHHHHH
Confidence 5556542 3456555555543222211 2222333444554 66776666555443
No 143
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.91 E-value=6e-09 Score=76.33 Aligned_cols=72 Identities=11% Similarity=-0.026 Sum_probs=66.3
Q ss_pred CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccC
Q 026637 18 NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSC 89 (235)
Q Consensus 18 ~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~ 89 (235)
+|+++.++..+|.++...|++++|++.++++++++|+++.++..+|.++...|++++|+..++++...-+..
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~ 74 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREE 74 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcC
Confidence 689999999999999999999999999999999999999999999999999999999999999998876553
No 144
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=98.89 E-value=9.8e-10 Score=101.95 Aligned_cols=113 Identities=8% Similarity=-0.075 Sum_probs=98.4
Q ss_pred HHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHHcCC
Q 026637 7 CFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD---------------CWSQHALCHVLQHDCC 71 (235)
Q Consensus 7 al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d---------------awA~halahvl~~~Gr 71 (235)
++...++++...|.++..+..+|..+...|+|++|+..+++|++++|++ +.++.++|.++..+|+
T Consensus 253 A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~ 332 (457)
T 1kt0_A 253 AKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLRE 332 (457)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333444445566778899999999999999999999999999999999 7999999999999999
Q ss_pred HHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 72 FKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 72 ~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+++|+..++++....|..+ ..+..+|.+++.+| ++++|+..|++.+..
T Consensus 333 ~~~A~~~~~~al~~~p~~~-----~a~~~~g~a~~~~g-~~~~A~~~~~~al~l 380 (457)
T 1kt0_A 333 YTKAVECCDKALGLDSANE-----KGLYRRGEAQLLMN-EFESAKGDFEKVLEV 380 (457)
T ss_dssp HHHHHHHHHHHHHHSTTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCccH-----HHHHHHHHHHHHcc-CHHHHHHHHHHHHHh
Confidence 9999999999999987732 34456999999998 999999999999876
No 145
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.89 E-value=7.4e-09 Score=90.11 Aligned_cols=121 Identities=9% Similarity=0.029 Sum_probs=99.1
Q ss_pred CCChhhHHHHHHhhcCCCCC------ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQ------EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~------~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~ 68 (235)
+|++++++...++++...+. ...++..+|.++.. |++++|++.+++|+++.|.+ +.++..+|.++..
T Consensus 89 ~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~ 167 (307)
T 2ifu_A 89 LQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVR 167 (307)
T ss_dssp TTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Confidence 48899999999999887432 23678888999988 99999999999999998875 6788999999999
Q ss_pred cCCHHHHHHHHHHchhhhccCCcc-hhHHHHHHHHHHHHhCCCCHHHHHHHHHhhc
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSSF-MYTHNWWHVALCYLEGHSPMRKVLEIYDNHI 123 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~~-l~~H~~WHlAL~~le~G~~~deAl~~yd~~i 123 (235)
+|++++|+..++++....+..+.. .....+..++++++..| ++++|+..|++.+
T Consensus 168 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g-~~~~A~~~~~~al 222 (307)
T 2ifu_A 168 QQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRA-DYVAAQKCVRESY 222 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHh
Confidence 999999999999998887764421 11224556888888888 8999999999988
No 146
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.88 E-value=4.1e-08 Score=82.16 Aligned_cols=204 Identities=14% Similarity=0.047 Sum_probs=133.6
Q ss_pred CCChhhHHHHHHhhcCC------CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY------NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~------~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~ 68 (235)
.|++++++...++++.. .|....++..+|..+...|++++|++.+++++++.|.. +.++..++.++..
T Consensus 56 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 135 (338)
T 3ro2_A 56 LHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHA 135 (338)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 48899999999998876 34556789999999999999999999999999998765 4499999999999
Q ss_pred cCC--------------------HHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhh
Q 026637 69 DCC--------------------FKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKEL 127 (235)
Q Consensus 69 ~Gr--------------------~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~ 127 (235)
.|+ +++++..++++....+..+. ......+..+|.+++..| ++++|+..|++.+....
T Consensus 136 ~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~~~ 214 (338)
T 3ro2_A 136 KGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG-NFRDAVIAHEQRLLIAK 214 (338)
T ss_dssp HHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHH
T ss_pred cCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHH
Confidence 999 99999999998765433221 112345667999999998 99999999999887631
Q ss_pred cCCCCCchHhHhHHHHHHHHHHh-cCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHH
Q 026637 128 EKPDAVHPEVYLNALGLLLRVYV-RGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKS 206 (235)
Q Consensus 128 ~~~~~~~~~~~~da~sLL~Rl~l-~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~ 206 (235)
+.+ .......+...+-++.+ .|.....-.-.+...+......+.......-......+...|+.+.+.+.++..-.
T Consensus 215 -~~~--~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 291 (338)
T 3ro2_A 215 -EFG--DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLA 291 (338)
T ss_dssp -HHT--CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred -hcC--ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 111 11112222222222222 23211001122222222222111222222333446667788998888877766555
Q ss_pred Hh
Q 026637 207 RH 208 (235)
Q Consensus 207 ~~ 208 (235)
..
T Consensus 292 ~~ 293 (338)
T 3ro2_A 292 IA 293 (338)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 147
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.88 E-value=8.5e-09 Score=75.38 Aligned_cols=88 Identities=10% Similarity=0.148 Sum_probs=84.0
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD-------CWSQHALCHVLQHDCCFK 73 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d-------awA~halahvl~~~Gr~~ 73 (235)
.|+.+++....++++...|+++.++..+|..+...|++++|+..+++++.++|++ +.++..+|.++...|+++
T Consensus 17 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 96 (131)
T 1elr_A 17 KKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYK 96 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHH
Confidence 4899999999999999999999999999999999999999999999999999988 999999999999999999
Q ss_pred HHHHHHHHchhhhcc
Q 026637 74 EAVQFMEECSSTWSS 88 (235)
Q Consensus 74 egi~~l~~a~~~w~~ 88 (235)
+|+..+++.....|+
T Consensus 97 ~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 97 DAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999988654
No 148
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.88 E-value=3e-09 Score=94.76 Aligned_cols=119 Identities=9% Similarity=-0.026 Sum_probs=80.4
Q ss_pred CCChhhHHHHHHhhcCCCCCCh-----------------hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED-----------------FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALC 63 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~-----------------~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~hala 63 (235)
.|++++|+...++++...|++. .++.++|.++...|+|++|+..+++||+++|+++.++..+|
T Consensus 192 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 271 (338)
T 2if4_A 192 EEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRG 271 (338)
T ss_dssp SSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4889999999999999999877 38899999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHH-HHhCCCCHHHHHHHHHhhchh
Q 026637 64 HVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALC-YLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 64 hvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~-~le~G~~~deAl~~yd~~i~~ 125 (235)
.++..+|++++|+..++++....|..+. .+. .++.+ ....+ ..+++..+|.+.+..
T Consensus 272 ~a~~~~g~~~~A~~~l~~al~l~p~~~~---a~~--~L~~l~~~~~~-~~~~a~~~~~~~l~~ 328 (338)
T 2if4_A 272 KAKAELGQMDSARDDFRKAQKYAPDDKA---IRR--ELRALAEQEKA-LYQKQKEMYKGIFKG 328 (338)
T ss_dssp HHHHTTTCHHHHHHHHHHTTC------------------------------------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHH---HHH--HHHHHHHHHHH-HHHHHHHHHHHhhCC
Confidence 9999999999999999999999887542 233 35554 33344 788999999888766
No 149
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.87 E-value=1.5e-08 Score=91.06 Aligned_cols=118 Identities=9% Similarity=-0.017 Sum_probs=78.8
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc------------
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHD------------ 69 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~------------ 69 (235)
|+.+++...+++++...|+++.++..+|..+...|++++|++..++|++++|+++.+++.+|.++..+
T Consensus 227 ~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~y~~~~~~~~~~~~~~~ 306 (472)
T 4g1t_A 227 EEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNAYLHCQIGCCYRAKVFQVMNLRENGM 306 (472)
T ss_dssp ---CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred hHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 44556666666666666666666666666666666777777777777777777766666666665432
Q ss_pred -------CCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 70 -------CCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 70 -------Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+.+++++..++++....|.... .+..+|.++...| ++++|+..|++.+..
T Consensus 307 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~-----~~~~lg~~~~~~~-~~~~A~~~~~kaL~~ 363 (472)
T 4g1t_A 307 YGKRKLLELIGHAVAHLKKADEANDNLFR-----VCSILASLHALAD-QYEEAEYYFQKEFSK 363 (472)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHCTTTCC-----CHHHHHHHHHHTT-CHHHHHHHHHHHHHS
T ss_pred HHHHHHHhhHHHHHHHHHHHhhcCCchhh-----hhhhHHHHHHHhc-cHHHHHHHHHHHHhc
Confidence 2345666666666666555331 2335889999998 999999999999876
No 150
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.86 E-value=6.7e-09 Score=94.21 Aligned_cols=111 Identities=7% Similarity=-0.052 Sum_probs=98.0
Q ss_pred CCChhhHHHHHHhhcC----------------CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLP----------------YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~----------------~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halah 64 (235)
.|+.++|+...++++. ..|.+..++..+|.++...|+|++|++.+++||+++|+++.++..+|.
T Consensus 236 ~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 315 (370)
T 1ihg_A 236 SQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQ 315 (370)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 4889999999999998 778888999999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHH
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLE 117 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~ 117 (235)
++..+|++++|+..++++....|..+ -.+..++.++...+ +++++.+
T Consensus 316 ~~~~~g~~~eA~~~l~~Al~l~P~~~-----~~~~~l~~~~~~~~-~~~~a~k 362 (370)
T 1ihg_A 316 GWQGLKEYDQALADLKKAQEIAPEDK-----AIQAELLKVKQKIK-AQKDKEK 362 (370)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHH-HHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHHH-HHHHHHH
Confidence 99999999999999999999988743 34445777777776 6776653
No 151
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=98.86 E-value=1.2e-08 Score=80.60 Aligned_cols=90 Identities=11% Similarity=0.095 Sum_probs=85.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHH-HHHhCCH--HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFS-LLELGQM--SDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQ 77 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~-L~e~g~~--~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~ 77 (235)
+|+.++++..+++++..+|+++.++..+|.+ +...|++ ++|+...+++++++|+++.++..+|.++..+|++++|+.
T Consensus 57 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 136 (177)
T 2e2e_A 57 QNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIE 136 (177)
T ss_dssp TTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHH
Confidence 5899999999999999999999999999999 7799999 999999999999999999999999999999999999999
Q ss_pred HHHHchhhhccCC
Q 026637 78 FMEECSSTWSSCS 90 (235)
Q Consensus 78 ~l~~a~~~w~~~~ 90 (235)
.++++....|..+
T Consensus 137 ~~~~al~~~p~~~ 149 (177)
T 2e2e_A 137 LWQKVMDLNSPRI 149 (177)
T ss_dssp HHHHHHHTCCTTS
T ss_pred HHHHHHhhCCCCc
Confidence 9999999988854
No 152
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=98.86 E-value=8.9e-10 Score=79.65 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=77.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcCCHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQHDCCFKE 74 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~~Gr~~e 74 (235)
.|++++++...++++..+|+++.++..+|.++...|++++|++.++++++++|++ +.++..++.++...|++++
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (111)
T 2l6j_A 17 QGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQI 96 (111)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 4899999999999999999999999999999999999999999999999999999 9999999999999999888
Q ss_pred HHHHHHHchh
Q 026637 75 AVQFMEECSS 84 (235)
Q Consensus 75 gi~~l~~a~~ 84 (235)
++..+++..+
T Consensus 97 a~~~~~~~~~ 106 (111)
T 2l6j_A 97 PVVEVDELPE 106 (111)
T ss_dssp CSSSSSSCSS
T ss_pred hHhHHHHhHH
Confidence 8776555433
No 153
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.85 E-value=6.4e-08 Score=83.12 Aligned_cols=123 Identities=11% Similarity=0.076 Sum_probs=93.3
Q ss_pred CChhhHHHHHHhhcCCCCCC------hhHHHHHHHHHHHhCCHHHHHHHHHHHH---hhCCCCH----HHHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQE------DFIFGILAFSLLELGQMSDAEEAAKKGL---KINKHDC----WSQHALCHVLQH 68 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~------~~~~g~~Af~L~e~g~~~~Ae~~arrAL---~L~P~da----wA~halahvl~~ 68 (235)
|+.++++...++++...+.. ..++..+|.++...|+|++|+..+++|+ ...|++. .++.++|.++..
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 67888888888888754322 3578888889999999999999999998 5566653 688889999999
Q ss_pred cCCHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHH-HHHHHhhchh
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKV-LEIYDNHIWK 125 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deA-l~~yd~~i~~ 125 (235)
+|++++|+..++++....+..+. ......+.++|.++...| ++++| ...|++++.-
T Consensus 209 ~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g-~~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 209 DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE-YEEAEIEDAYKKASFF 266 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcC-CcHHHHHHHHHHHHHH
Confidence 99999999999888766543221 222445566888888887 88888 7778877755
No 154
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.84 E-value=2.3e-08 Score=69.60 Aligned_cols=84 Identities=11% Similarity=0.105 Sum_probs=72.6
Q ss_pred CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHH
Q 026637 20 QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWW 99 (235)
Q Consensus 20 ~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~W 99 (235)
.++..+..+|..+...|++++|+..++++++++|+++.++..+|.++...|++++|+..++++....|..+ ..+.
T Consensus 7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~---~~~~-- 81 (91)
T 1na3_A 7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA---EAKQ-- 81 (91)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH---HHHH--
T ss_pred ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH---HHHH--
Confidence 45678889999999999999999999999999999999999999999999999999999999999987643 2233
Q ss_pred HHHHHHHhC
Q 026637 100 HVALCYLEG 108 (235)
Q Consensus 100 HlAL~~le~ 108 (235)
.++..+...
T Consensus 82 ~l~~~~~~~ 90 (91)
T 1na3_A 82 NLGNAKQKQ 90 (91)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 366666543
No 155
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.83 E-value=1.4e-07 Score=83.57 Aligned_cols=125 Identities=10% Similarity=0.029 Sum_probs=101.7
Q ss_pred CCChhhHHHHHHhhcCCCC---C----ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCC------CHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQ---Q----EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKH------DCWSQHALCHVLQ 67 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p---~----~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~------dawA~halahvl~ 67 (235)
+|+.+.++...++++...+ + ....+..+|.++...|++++|++.+++|+++.+. .+.+++++|.++.
T Consensus 154 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~ 233 (378)
T 3q15_A 154 MKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYD 233 (378)
T ss_dssp TTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 5889999999999998643 2 2457889999999999999999999999998542 3568999999999
Q ss_pred HcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 68 HDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 68 ~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.+|++++|+..++++..................+|..+...| ++++|+..|++.+...
T Consensus 234 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~~~~al~~~ 291 (378)
T 3q15_A 234 RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAG-QTQKAFQFIEEGLDHI 291 (378)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHH
Confidence 999999999999999884331111111345567999999998 9999999999999874
No 156
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.83 E-value=3.1e-08 Score=85.15 Aligned_cols=125 Identities=12% Similarity=0.126 Sum_probs=98.6
Q ss_pred CChhhHHHHHHhhcCCCCC--C----hhHHHHHHHHHHHhCCHHHHHHHHHHHHh-------hCCCCHHHHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQ--E----DFIFGILAFSLLELGQMSDAEEAAKKGLK-------INKHDCWSQHALCHVLQH 68 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~--~----~~~~g~~Af~L~e~g~~~~Ae~~arrAL~-------L~P~dawA~halahvl~~ 68 (235)
|+.++++...++++...+. + ..++..+|.++.+.|+|++|+..+++|+. ..|..+.++.++|.++..
T Consensus 129 ~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 3u3w_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp SCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence 6788999999999875332 2 23688999999999999999999999994 334445688999999999
Q ss_pred cCCHHHHHHHHHHchhhhccCCcc-hhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSSF-MYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~~-l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+|++++|+.+++++....+..+.. .....+.++|.++...|.++++|++.|.+++.-.
T Consensus 209 ~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 209 DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 999999999999998776554322 2245667799999998734699999999988764
No 157
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.82 E-value=2.3e-07 Score=86.15 Aligned_cols=115 Identities=10% Similarity=-0.003 Sum_probs=89.0
Q ss_pred hHHHHHHhhcCCCCCChhHHHHHHHHHHH-------hCCHH-------HHHHHHHHHHh-hCCCCHHHHHHHHHHHHHcC
Q 026637 6 LCFDIIHQVLPYNQQEDFIFGILAFSLLE-------LGQMS-------DAEEAAKKGLK-INKHDCWSQHALCHVLQHDC 70 (235)
Q Consensus 6 ~al~~~~ral~~~p~~~~~~g~~Af~L~e-------~g~~~-------~Ae~~arrAL~-L~P~dawA~halahvl~~~G 70 (235)
+++...++++...|.++.++..+|-.+.. .|+++ +|.+.+++|++ ++|+++..+..++.++...|
T Consensus 256 ~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g 335 (530)
T 2ooe_A 256 RVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM 335 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC
Confidence 55667888888888888888888887775 68876 88888888887 78888888888888888888
Q ss_pred CHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 71 CFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 71 r~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+++++...++++....|..+ .-.|-.++.++...| ++++|+++|++++..
T Consensus 336 ~~~~A~~~~~~al~~~p~~~----~~~~~~~~~~~~~~~-~~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 336 KYEKVHSIYNRLLAIEDIDP----TLVYIQYMKFARRAE-GIKSGRMIFKKARED 385 (530)
T ss_dssp CHHHHHHHHHHHHHSSSSCH----HHHHHHHHHHHHHHH-HHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhCccccCc----hHHHHHHHHHHHHhc-CHHHHHHHHHHHHhc
Confidence 88888888888887765532 124444666666666 788888888888764
No 158
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=98.82 E-value=2.2e-08 Score=80.54 Aligned_cols=88 Identities=8% Similarity=-0.030 Sum_probs=84.6
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH----------------HHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC----------------WSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da----------------wA~halah 64 (235)
+|+.++++...++++..+|+++.++..+|.++...|++++|++.+++++++.|++. .++..+|.
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (213)
T 1hh8_A 50 LKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAF 129 (213)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999888877 99999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhcc
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~ 88 (235)
++..+|++++|+..++++....|.
T Consensus 130 ~~~~~g~~~~A~~~~~~al~~~p~ 153 (213)
T 1hh8_A 130 MYAKKEEWKKAEEQLALATSMKSE 153 (213)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTCCS
T ss_pred HHHHccCHHHHHHHHHHHHHcCcc
Confidence 999999999999999999999876
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.79 E-value=2.6e-07 Score=79.25 Aligned_cols=125 Identities=10% Similarity=0.029 Sum_probs=100.7
Q ss_pred CCChhhHHHHHHhhcCCCCCCh------hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQED------FIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~------~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~ 68 (235)
.|+.+++...+.+++...+..+ ..+..+|..+...|++++|+...++|+.+.+.. +.++..+|.++..
T Consensus 88 ~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 2qfc_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 4788999999999988766543 234556777888899999999999999987655 6689999999999
Q ss_pred cCCHHHHHHHHHHchhhhccCCc--chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSS--FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~--~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+|++++|+..++++.......+. .+....+.++|.++...| +|++|+..|++.+...
T Consensus 168 ~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~-~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 168 NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS-RYEESLYQVNKAIEIS 226 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHh-hHHHHHHHHHHHHHHH
Confidence 99999999999999854333222 112246667999999998 9999999999998763
No 160
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.78 E-value=9.2e-07 Score=82.08 Aligned_cols=115 Identities=10% Similarity=0.046 Sum_probs=99.1
Q ss_pred hHHHHHHhhcC-CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHch
Q 026637 6 LCFDIIHQVLP-YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC-WSQHALCHVLQHDCCFKEAVQFMEECS 83 (235)
Q Consensus 6 ~al~~~~ral~-~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da-wA~halahvl~~~Gr~~egi~~l~~a~ 83 (235)
+++...+|++. ..|++..++..++..+...|++++|++.++++++++|+++ .++...+.++..+|+.++++..++++.
T Consensus 304 ~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al 383 (530)
T 2ooe_A 304 EAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAR 383 (530)
T ss_dssp HHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 89999999998 8999999999999999999999999999999999999996 688999999999999999999999998
Q ss_pred hhhccCCcchhHHHHHHHHHH-HHhCCCCHHHHHHHHHhhchhh
Q 026637 84 STWSSCSSFMYTHNWWHVALC-YLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 84 ~~w~~~~~~l~~H~~WHlAL~-~le~G~~~deAl~~yd~~i~~~ 126 (235)
..-|.. .+.++-.++. +...| ++++|+.+|++.+...
T Consensus 384 ~~~~~~-----~~~~~~~a~~~~~~~~-~~~~A~~~~e~al~~~ 421 (530)
T 2ooe_A 384 EDARTR-----HHVYVTAALMEYYCSK-DKSVAFKIFELGLKKY 421 (530)
T ss_dssp TCTTCC-----THHHHHHHHHHHHHTC-CHHHHHHHHHHHHHHH
T ss_pred hccCCc-----hHHHHHHHHHHHHHcC-ChhHHHHHHHHHHHHC
Confidence 875442 3444444444 22477 8999999999999873
No 161
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.78 E-value=3.3e-07 Score=81.78 Aligned_cols=116 Identities=12% Similarity=-0.034 Sum_probs=60.9
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHH----HHc---CCHHHH
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELG--QMSDAEEAAKKGLKINKHDCWSQHALCHVL----QHD---CCFKEA 75 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g--~~~~Ae~~arrAL~L~P~dawA~halahvl----~~~---Gr~~eg 75 (235)
++++...+++|..+|++..+....+.++...| +++++.+...++|.+||++.++++..+.++ ... ++.++.
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~E 129 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYRE 129 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHH
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHH
Confidence 44555555555555555555555555555555 555555555555555555555555555555 433 455555
Q ss_pred HHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHH--HHHHHHHhhchhh
Q 026637 76 VQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMR--KVLEIYDNHIWKE 126 (235)
Q Consensus 76 i~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~d--eAl~~yd~~i~~~ 126 (235)
+.++++.....|. + .|.|-|.....-..| +++ ++++.+++.|...
T Consensus 130 L~~~~~~l~~~pk-n----y~aW~~R~~vl~~l~-~~~~~~EL~~~~~~i~~d 176 (306)
T 3dra_A 130 FDILEAMLSSDPK-N----HHVWSYRKWLVDTFD-LHNDAKELSFVDKVIDTD 176 (306)
T ss_dssp HHHHHHHHHHCTT-C----HHHHHHHHHHHHHTT-CTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCC-C----HHHHHHHHHHHHHhc-ccChHHHHHHHHHHHHhC
Confidence 5555555555544 2 344444444444444 444 5555555555444
No 162
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.77 E-value=7.4e-09 Score=84.72 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=79.7
Q ss_pred HHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHchhhhccCCcchhHHHHHHH
Q 026637 32 LLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCF----------KEAVQFMEECSSTWSSCSSFMYTHNWWHV 101 (235)
Q Consensus 32 L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~----------~egi~~l~~a~~~w~~~~~~l~~H~~WHl 101 (235)
....++|++|.+.+++|+++||+++.++.++|-++...|++ ++|+..+++++...|.. .-.||++
T Consensus 12 ~~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~-----~~A~~~L 86 (158)
T 1zu2_A 12 FDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK-----DEAVWCI 86 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC-----HHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc-----HHHHHHH
Confidence 45667899999999999999999999999999999999986 59999999999999884 3467789
Q ss_pred HHHHHhCC----------CCHHHHHHHHHhhchhh
Q 026637 102 ALCYLEGH----------SPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 102 AL~~le~G----------~~~deAl~~yd~~i~~~ 126 (235)
+.+|..+| |++++|++.|+++|...
T Consensus 87 G~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~ 121 (158)
T 1zu2_A 87 GNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQ 121 (158)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhC
Confidence 99998763 27999999999999873
No 163
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.77 E-value=3e-08 Score=88.07 Aligned_cols=121 Identities=10% Similarity=-0.030 Sum_probs=102.6
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcCCHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD--CWSQHALCHVLQHDCCFKEAVQF 78 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d--awA~halahvl~~~Gr~~egi~~ 78 (235)
+|++++++..++++++..|++. ++.++|..+.+.|++++|++..++++...++. ..++..+|.++...|++++|+++
T Consensus 115 ~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~ 193 (282)
T 4f3v_A 115 QGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERR 193 (282)
T ss_dssp HTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 4899999999999999999998 99999999999999999999999998864332 45899999999999999999999
Q ss_pred HHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 79 MEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 79 l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++++.... ..|.. ....++.+|+++.++| +.++|.++|++.+..
T Consensus 194 l~~a~~g~-~~P~~-~~da~~~~glaL~~lG-r~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 194 LTEANDSP-AGEAC-ARAIAWYLAMARRSQG-NESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHTST-TTTTT-HHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHhcCC-CCccc-cHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhc
Confidence 99997543 11221 1234456999999998 999999999999887
No 164
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.76 E-value=2.2e-08 Score=73.91 Aligned_cols=81 Identities=9% Similarity=0.048 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHH
Q 026637 39 SDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEI 118 (235)
Q Consensus 39 ~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~ 118 (235)
.+|++.++++++++|+++.++..+|.++..+|++++|+..++++....|..+ ..+..+|.++...| ++++|+..
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----~~~~~la~~~~~~g-~~~~A~~~ 75 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS-----VAWKWLGKTLQGQG-DRAGARQA 75 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHT-CHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcH-----HHHHHHHHHHHHcC-CHHHHHHH
Confidence 3578899999999999999999999999999999999999999999987642 34556999999998 99999999
Q ss_pred HHhhchh
Q 026637 119 YDNHIWK 125 (235)
Q Consensus 119 yd~~i~~ 125 (235)
|++.+..
T Consensus 76 ~~~al~~ 82 (115)
T 2kat_A 76 WESGLAA 82 (115)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998876
No 165
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.75 E-value=5.1e-08 Score=87.59 Aligned_cols=118 Identities=13% Similarity=0.095 Sum_probs=97.9
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHH---HHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFS---LLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH----DCCFKE 74 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~---L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~----~Gr~~e 74 (235)
++.++|+...++++..+|+++.++..++.+ +...+++++|.+..++|++++|+++.+...++.++.. .|+.++
T Consensus 152 ~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~ 231 (472)
T 4g1t_A 152 NQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGE 231 (472)
T ss_dssp THHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHH
Confidence 457899999999999999999877666654 6667888999999999999999999999999877654 567889
Q ss_pred HHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 75 AVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 75 gi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++..++++....|..+ ..+-.+|.++...| ++++|+..|++.+..
T Consensus 232 a~~~~~~al~~~~~~~-----~~~~~lg~~~~~~~-~~~~A~~~~~~al~~ 276 (472)
T 4g1t_A 232 GEKLVEEALEKAPGVT-----DVLRSAAKFYRRKD-EPDKAIELLKKALEY 276 (472)
T ss_dssp HHHHHHHHHHHCSSCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccHH-----HHHHHHHHHHHHcC-chHHHHHHHHHHHHh
Confidence 9999999999887743 34446999999998 999999999999876
No 166
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.75 E-value=4e-08 Score=68.41 Aligned_cols=70 Identities=16% Similarity=0.199 Sum_probs=67.1
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDC 70 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~G 70 (235)
.|++++++...++++...|+++.++..+|.++...|++++|++.++++++++|+++.++..++.++..+|
T Consensus 22 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 22 QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred ccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 4899999999999999999999999999999999999999999999999999999999999999998765
No 167
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.72 E-value=4.2e-08 Score=85.26 Aligned_cols=124 Identities=8% Similarity=0.039 Sum_probs=102.7
Q ss_pred CCChhhHHHHHHhhcCCCCC------ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQ------EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~------~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~ 68 (235)
.|++++++....+++...+. ....+..+|.++...|++++|+..+++|+++.+.. +.++..+|.++..
T Consensus 49 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~ 128 (307)
T 2ifu_A 49 AKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP 128 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc
Confidence 47889999999999887542 24578889999999999999999999999996532 5788999999998
Q ss_pred cCCHHHHHHHHHHchhhhccCCcc-hhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 69 DCCFKEAVQFMEECSSTWSSCSSF-MYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~~~-l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
|++++|+..++++....+..+.. .....+-.+|.++...| +|++|+..|++.+...
T Consensus 129 -g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g-~~~~A~~~~~~al~~~ 185 (307)
T 2ifu_A 129 -LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQ-KFDEAAASLQKEKSMY 185 (307)
T ss_dssp -TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHH
Confidence 99999999999999988764321 11234556999999998 9999999999998864
No 168
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.71 E-value=1.1e-07 Score=71.16 Aligned_cols=103 Identities=17% Similarity=0.098 Sum_probs=87.5
Q ss_pred hhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcc-hh
Q 026637 22 DFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC------WSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSF-MY 94 (235)
Q Consensus 22 ~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da------wA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~-l~ 94 (235)
..++..+|..+...|++++|++.+++++++.|+.. .++..+|.++..+|++++|+..++++....+..+.. ..
T Consensus 9 ~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~ 88 (164)
T 3ro3_A 9 GRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVE 88 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHH
Confidence 46788999999999999999999999999987654 589999999999999999999999998877664321 12
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 95 THNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 95 ~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
...+..+|.++...| ++++|++.|++.+..
T Consensus 89 ~~~~~~l~~~~~~~~-~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 89 AQSCYSLGNTYTLLQ-DYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 335566999999998 999999999998866
No 169
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.67 E-value=1.6e-07 Score=67.08 Aligned_cols=86 Identities=9% Similarity=0.103 Sum_probs=74.3
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHH
Q 026637 27 ILAFSLLELGQMSDAEEAAKKGLKINKHDCW-SQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCY 105 (235)
Q Consensus 27 ~~Af~L~e~g~~~~Ae~~arrAL~L~P~daw-A~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~ 105 (235)
..|..+...|++++|++.++++++++|+++. ++..+|.++..+|++++|+..++++....|..+ ..+++
T Consensus 5 ~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~---~~~~~------- 74 (99)
T 2kc7_A 5 KTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP---ALQAR------- 74 (99)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST---HHHHH-------
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH---HHHHH-------
Confidence 4577888999999999999999999999999 999999999999999999999999999988754 22221
Q ss_pred HhCCCCHHHHHHHHHhhchhh
Q 026637 106 LEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 106 le~G~~~deAl~~yd~~i~~~ 126 (235)
+ .+++++..|.+.+...
T Consensus 75 ---~-~~~~a~~~~~~~~~~~ 91 (99)
T 2kc7_A 75 ---K-MVMDILNFYNKDMYNQ 91 (99)
T ss_dssp ---H-HHHHHHHHHCCTTHHH
T ss_pred ---H-HHHHHHHHHHHHhccC
Confidence 4 6889999998877653
No 170
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.65 E-value=3.8e-07 Score=81.39 Aligned_cols=189 Identities=7% Similarity=-0.042 Sum_probs=133.6
Q ss_pred ChhhHHHHHHhhcCCCCCChhHHHHHHHHH----HHh---CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH--
Q 026637 3 RPDLCFDIIHQVLPYNQQEDFIFGILAFSL----LEL---GQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFK-- 73 (235)
Q Consensus 3 ~~~~al~~~~ral~~~p~~~~~~g~~Af~L----~e~---g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~-- 73 (235)
+.++++....+++..+|.+..+....+.++ ... ++++++.+...++++++|++.++++-.+.++...|+++
T Consensus 84 ~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~ 163 (306)
T 3dra_A 84 NLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDA 163 (306)
T ss_dssp CHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCH
T ss_pred cHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChH
Confidence 788999999999999999999999999999 666 79999999999999999999999999999999999998
Q ss_pred HHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCc
Q 026637 74 EAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGE 153 (235)
Q Consensus 74 egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~ 153 (235)
+.+++.++.....|+ | .|-|-|........| +.. -..+|+..+.--. + ....+.-|.++-.+|-.+...
T Consensus 164 ~EL~~~~~~i~~d~~-N----~sAW~~R~~ll~~l~-~~~-~~~~~~eEl~~~~-~---aI~~~p~n~SaW~y~~~ll~~ 232 (306)
T 3dra_A 164 KELSFVDKVIDTDLK-N----NSAWSHRFFLLFSKK-HLA-TDNTIDEELNYVK-D---KIVKCPQNPSTWNYLLGIHER 232 (306)
T ss_dssp HHHHHHHHHHHHCTT-C----HHHHHHHHHHHHSSG-GGC-CHHHHHHHHHHHH-H---HHHHCSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-C----HHHHHHHHHHHHhcc-ccc-hhhhHHHHHHHHH-H---HHHhCCCCccHHHHHHHHHHh
Confidence 999999999999887 4 356555665555544 211 1123333333210 0 012236889999999888866
Q ss_pred ccccccchHHHHHHHHhhhc----chhcchhhHHHHHHHhcCCCchHHHHHHHHHH
Q 026637 154 LDVFGNRLKVLADCVADQAN----WYLECHLDLLILWALANTGEVSKAEDLLKGLK 205 (235)
Q Consensus 154 ~~~~g~rw~~la~~~~~~~~----~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~ 205 (235)
. |...+.+.+....-.. ....+|+---.+-.+...|+.+.+.++.+.+.
T Consensus 233 ~---~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~~~~~~A~~~~~~l~ 285 (306)
T 3dra_A 233 F---DRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQKKYNESRTVYDLLK 285 (306)
T ss_dssp T---TCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred c---CCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 3 4445656555554222 12233433333444556677666666665554
No 171
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.63 E-value=9.4e-07 Score=75.74 Aligned_cols=125 Identities=10% Similarity=0.025 Sum_probs=98.4
Q ss_pred CCChhhHHHHHHhhcCCCCCChh------HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDF------IFGILAFSLLELGQMSDAEEAAKKGLKINKHDC------WSQHALCHVLQH 68 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~------~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da------wA~halahvl~~ 68 (235)
.|+.+++...+++++...+..+. .+..++..+...|++++|....++|+.+.+... .++..+|.++..
T Consensus 88 ~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 3u3w_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 37889999999999987765554 233456666777899999999999999755433 379999999999
Q ss_pred cCCHHHHHHHHHHchhhhccCC--cchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 69 DCCFKEAVQFMEECSSTWSSCS--SFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 69 ~Gr~~egi~~l~~a~~~w~~~~--~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+|++++|+..++++.......+ .......+.++|.++...| +|++|+..|++.+.-.
T Consensus 168 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~-~y~~A~~~~~~al~~~ 226 (293)
T 3u3w_A 168 NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDS-RYEESLYQVNKAIEIS 226 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHH
Confidence 9999999999999986443321 1122335667999999998 9999999999998764
No 172
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.63 E-value=5.5e-06 Score=68.16 Aligned_cols=144 Identities=13% Similarity=0.026 Sum_probs=109.8
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC----CHHHHHHHHH
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDC----CFKEAVQFME 80 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~G----r~~egi~~l~ 80 (235)
++++...+++... +++.++..+|..+...+++++|++.+++|++. +++.++..+|.++.. | ++++|+.+++
T Consensus 3 ~eA~~~~~~aa~~--g~~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~ 77 (212)
T 3rjv_A 3 TEPGSQYQQQAEA--GDRRAQYYLADTWVSSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAE 77 (212)
T ss_dssp -CTTHHHHHHHHT--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHH
T ss_pred chHHHHHHHHHHC--CCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHH
Confidence 3566777777765 88999999999999999999999999999764 799999999999988 7 9999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHh----CCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCcccc
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLE----GHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDV 156 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le----~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~ 156 (235)
++... . ....++ .++.+|+. .+ ++++|+.+|.+.+... +.....++.-.|=.+...|..|
T Consensus 78 ~A~~~--g---~~~a~~--~Lg~~y~~g~g~~~-d~~~A~~~~~~A~~~~-------~~~~~~~a~~~Lg~~y~~g~g~- 141 (212)
T 3rjv_A 78 KAVEA--G---SKSGEI--VLARVLVNRQAGAT-DVAHAITLLQDAARDS-------ESDAAVDAQMLLGLIYASGVHG- 141 (212)
T ss_dssp HHHHT--T---CHHHHH--HHHHHHTCGGGSSC-CHHHHHHHHHHHTSST-------TSHHHHHHHHHHHHHHHHTSSS-
T ss_pred HHHHC--C---CHHHHH--HHHHHHHcCCCCcc-CHHHHHHHHHHHHHcC-------CCcchHHHHHHHHHHHHcCCCC-
Confidence 99654 2 112333 59999987 76 8999999999988763 1112356666677777777754
Q ss_pred cccchHHHHHHHHh
Q 026637 157 FGNRLKVLADCVAD 170 (235)
Q Consensus 157 ~g~rw~~la~~~~~ 170 (235)
....+.-...+..
T Consensus 142 -~~d~~~A~~~~~~ 154 (212)
T 3rjv_A 142 -PEDDVKASEYFKG 154 (212)
T ss_dssp -SCCHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHH
Confidence 3455555555544
No 173
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.63 E-value=4.7e-07 Score=86.85 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=106.6
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCC----------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC--C
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQ----------MSDAEEAAKKGLKINKHDCWSQHALCHVLQHDC--C 71 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~----------~~~Ae~~arrAL~L~P~dawA~halahvl~~~G--r 71 (235)
.++++...++++..+|++..++...+.++...|+ +++|.+...+++..+|++.++++..++++...| +
T Consensus 45 ~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~ 124 (567)
T 1dce_A 45 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN 124 (567)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccccc
Confidence 4688999999999999999999999999999998 999999999999999999999999999999999 6
Q ss_pred HHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 72 FKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 72 ~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+++++++++++....|+ + .|.|-|.+......|..++++++.+++.|..
T Consensus 125 ~~~el~~~~k~l~~d~~-N----~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~ 173 (567)
T 1dce_A 125 WARELELCARFLEADER-N----FHCWDYRRFVAAQAAVAPAEELAFTDSLITR 173 (567)
T ss_dssp HHHHHHHHHHHHHHCTT-C----HHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHhhccc-c----ccHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 79999999999999988 4 4777777777766654799999999999986
No 174
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.62 E-value=1.3e-07 Score=84.03 Aligned_cols=185 Identities=11% Similarity=0.039 Sum_probs=135.6
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHH-------HHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHH-------------
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGIL-------AFSLLELGQMSDAEEAAKKGLKINKHDCWSQHA------------- 61 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~-------Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~ha------------- 61 (235)
++.++++..+.+++..+|+.+.++..+ +.+|...+++.++....+++++++|+...+...
T Consensus 20 ~d~~~A~~~F~~a~~~dP~~~Daw~g~~a~g~~~~~~L~~~~r~~~a~~~~~~~l~l~p~~l~a~~~~~g~y~~~~~~v~ 99 (282)
T 4f3v_A 20 MSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVT 99 (282)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHTTCCCHHHHHHHHHTGGGTTHHHHTTTCCGGGGCCEEECCTTTCCCEEECS
T ss_pred CCHHHHHHHHHHHHHhChhhhHHHHhHHHccCCcHHHHHHHHHHHHHHHHHHHHhcCChhhhhhhhccCCcccccccccC
Confidence 688999999999999999999999888 899999999999999999999999998776666
Q ss_pred --------HHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCC
Q 026637 62 --------LCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAV 133 (235)
Q Consensus 62 --------lahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~ 133 (235)
.+-++...|++++|.+.+++.....|. . . ..|.+|+.+++.| ++++|++.|++.+...
T Consensus 100 ~r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~---~--~-~~~~~a~l~~~~~-r~~dA~~~l~~a~~~~------- 165 (282)
T 4f3v_A 100 SPLAITMGFAACEAAQGNYADAMEALEAAPVAGSE---H--L-VAWMKAVVYGAAE-RWTDVIDQVKSAGKWP------- 165 (282)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCH---H--H-HHHHHHHHHHHTT-CHHHHHHHHTTGGGCS-------
T ss_pred CHhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCc---h--H-HHHHHHHHHHHcC-CHHHHHHHHHHhhccC-------
Confidence 778899999999999999998876654 2 2 5567999999998 9999999998665431
Q ss_pred chHhHhH-HHHHHHHHHhcCcccccccchHHHHHHHHhhhcchh--cchhhHH--HHHHHhcCCCchHHHHHHHHHHHH
Q 026637 134 HPEVYLN-ALGLLLRVYVRGELDVFGNRLKVLADCVADQANWYL--ECHLDLL--ILWALANTGEVSKAEDLLKGLKSR 207 (235)
Q Consensus 134 ~~~~~~d-a~sLL~Rl~l~G~~~~~g~rw~~la~~~~~~~~~~~--~~F~d~H--~~~al~~ag~~~~~~~ll~~~~~~ 207 (235)
.+.+.+ +.-.|=+. ++.. .++++-.+.+..-..... ..+.|.+ ..++|...|+.+++..+++.+...
T Consensus 166 -d~~~~~~a~~~LG~a-l~~L-----G~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 166 -DKFLAGAAGVAHGVA-AANL-----ALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp -CHHHHHHHHHHHHHH-HHHT-----TCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -CcccHHHHHHHHHHH-HHHC-----CCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 111112 22222111 1111 134444444433222221 1144554 488999999999999999888765
No 175
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.62 E-value=5.9e-07 Score=74.10 Aligned_cols=81 Identities=11% Similarity=-0.016 Sum_probs=38.9
Q ss_pred ChhhHHHHHHhhcCCCCCChhHHHHHHHHHHH----hCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHH----cCCH
Q 026637 3 RPDLCFDIIHQVLPYNQQEDFIFGILAFSLLE----LGQMSDAEEAAKKGLKINK--HDCWSQHALCHVLQH----DCCF 72 (235)
Q Consensus 3 ~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e----~g~~~~Ae~~arrAL~L~P--~dawA~halahvl~~----~Gr~ 72 (235)
+.++++...++++ .++++.++..+|..+.. .+++++|++..++|++.+| +++.++..+|.++.. .+++
T Consensus 68 ~~~~A~~~~~~A~--~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~ 145 (212)
T 3rjv_A 68 DYPQARQLAEKAV--EAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDD 145 (212)
T ss_dssp CHHHHHHHHHHHH--HTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCH
T ss_pred CHHHHHHHHHHHH--HCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCH
Confidence 3444444444442 23444444444444444 4455555555555555544 234555555555554 4455
Q ss_pred HHHHHHHHHchhh
Q 026637 73 KEAVQFMEECSST 85 (235)
Q Consensus 73 ~egi~~l~~a~~~ 85 (235)
++|+.+++++...
T Consensus 146 ~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 146 VKASEYFKGSSSL 158 (212)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHc
Confidence 5555555554443
No 176
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.62 E-value=1.7e-08 Score=94.32 Aligned_cols=96 Identities=9% Similarity=0.054 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHH
Q 026637 24 IFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVAL 103 (235)
Q Consensus 24 ~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL 103 (235)
.+..+|..+...|+|++|++.+++|++++|+++.++..+|.++..+|++++|+..++++....|..+ ..+..+|.
T Consensus 8 ~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~-----~~~~~lg~ 82 (477)
T 1wao_1 8 ELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYI-----KGYYRRAA 82 (477)
T ss_dssp TSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCH-----HHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCH-----HHHHHHHH
Confidence 3444555677899999999999999999999999999999999999999999999999999987642 34446999
Q ss_pred HHHhCCCCHHHHHHHHHhhchh
Q 026637 104 CYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 104 ~~le~G~~~deAl~~yd~~i~~ 125 (235)
+++..| ++++|++.|++.+..
T Consensus 83 ~~~~~g-~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 83 SNMALG-KFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHcC-CHHHHHHHHHHHHHh
Confidence 999998 999999999999886
No 177
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.60 E-value=1.5e-07 Score=86.56 Aligned_cols=114 Identities=7% Similarity=-0.077 Sum_probs=91.9
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCC-----------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQ-----------MSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCF 72 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~-----------~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~ 72 (235)
..++++.++||+..+|++++++..+++++..... ..+|.+ +..++.++|+++.++.++++++..+|++
T Consensus 215 ~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~-a~~a~~~~~~~a~~~~alal~~l~~gd~ 293 (372)
T 3ly7_A 215 LNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEID-NIVTLPELNNLSIIYQIKAVSALVKGKT 293 (372)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH-HHHTCGGGTTCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHH-HHHhcccCCcCHHHHHHHHHHHHhCCCH
Confidence 4688999999999999999999999987753221 112333 2245688999999999999999999999
Q ss_pred HHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 73 KEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 73 ~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++|+..++++....|+ . ..|.. ++..+...| ++++|++.|++++..
T Consensus 294 d~A~~~l~rAl~Ln~s---~-~a~~l--lG~~~~~~G-~~~eA~e~~~~AlrL 339 (372)
T 3ly7_A 294 DESYQAINTGIDLEMS---W-LNYVL--LGKVYEMKG-MNREAADAYLTAFNL 339 (372)
T ss_dssp HHHHHHHHHHHHHCCC---H-HHHHH--HHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCC---H-HHHHH--HHHHHHHCC-CHHHHHHHHHHHHhc
Confidence 9999999999999743 2 23333 677777787 999999999999988
No 178
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.59 E-value=2.6e-07 Score=81.88 Aligned_cols=124 Identities=8% Similarity=-0.042 Sum_probs=103.5
Q ss_pred CCChhhHHHHHHhhcCCCC------CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCC-------CHHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQ------QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKH-------DCWSQHALCHVLQ 67 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p------~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~-------dawA~halahvl~ 67 (235)
.|+.++|+...++++...+ ..+.++..+|.++...|++++|...+++|+++.|. .+.++..+|.++.
T Consensus 114 ~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~ 193 (378)
T 3q15_A 114 QKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYD 193 (378)
T ss_dssp TTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHH
T ss_pred HCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 4899999999999998632 34578999999999999999999999999998664 2567889999999
Q ss_pred HcCCHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 68 HDCCFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 68 ~~Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.+|++++|+..++++....+..+. ......+..+|.++...| ++++|++.|.+.+..
T Consensus 194 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~-~~~~A~~~~~~al~~ 251 (378)
T 3q15_A 194 DFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSG-DDQMAVEHFQKAAKV 251 (378)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHH
Confidence 999999999999999886554321 123345556999999998 999999999999884
No 179
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.55 E-value=1.4e-07 Score=67.32 Aligned_cols=81 Identities=10% Similarity=0.088 Sum_probs=73.2
Q ss_pred CCChhhHHHHHHhhcCCCCCChh-HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDF-IFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~-~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l 79 (235)
.|+.++++..+++++..+|+++. ++..+|.++...|++++|++.++++++++|+++.++.. +.+.+++..+
T Consensus 13 ~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~ 84 (99)
T 2kc7_A 13 QGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFY 84 (99)
T ss_dssp HTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHH
Confidence 37899999999999999999999 99999999999999999999999999999999987643 7788888888
Q ss_pred HHchhhhccC
Q 026637 80 EECSSTWSSC 89 (235)
Q Consensus 80 ~~a~~~w~~~ 89 (235)
++.....|+.
T Consensus 85 ~~~~~~~p~~ 94 (99)
T 2kc7_A 85 NKDMYNQLEH 94 (99)
T ss_dssp CCTTHHHHCC
T ss_pred HHHhccCccc
Confidence 8887777663
No 180
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.54 E-value=3.1e-07 Score=83.15 Aligned_cols=97 Identities=9% Similarity=-0.085 Sum_probs=87.9
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHh----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhh
Q 026637 23 FIFGILAFSLLELGQMSDAEEAAKKGLK----------------INKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTW 86 (235)
Q Consensus 23 ~~~g~~Af~L~e~g~~~~Ae~~arrAL~----------------L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w 86 (235)
..+..+|..+...|+|++|++.+++|++ ++|.++.++.++|.++..+|++++|+..++++....
T Consensus 224 ~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~ 303 (370)
T 1ihg_A 224 EDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEID 303 (370)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC
Confidence 4577889999999999999999999999 899999999999999999999999999999999988
Q ss_pred ccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 87 SSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 87 ~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
|..+ ..+..+|.+++.+| ++++|++.|++.+..
T Consensus 304 p~~~-----~a~~~lg~~~~~~g-~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 304 PSNT-----KALYRRAQGWQGLK-EYDQALADLKKAQEI 336 (370)
T ss_dssp TTCH-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred chhH-----HHHHHHHHHHHHcc-CHHHHHHHHHHHHHh
Confidence 7632 34446999999998 999999999999877
No 181
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=98.50 E-value=2e-07 Score=82.98 Aligned_cols=99 Identities=9% Similarity=-0.037 Sum_probs=87.8
Q ss_pred ChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHch
Q 026637 21 EDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDC-----------------WSQHALCHVLQHDCCFKEAVQFMEECS 83 (235)
Q Consensus 21 ~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da-----------------wA~halahvl~~~Gr~~egi~~l~~a~ 83 (235)
....+..+|..+...|+|++|+..+++|+.++|++. .++.++|.++..+|++++|+..++++.
T Consensus 178 ~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al 257 (338)
T 2if4_A 178 AADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVL 257 (338)
T ss_dssp HHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 456778889999999999999999999999999998 489999999999999999999999999
Q ss_pred hhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 84 STWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 84 ~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
...|.. ...+..+|.+++.+| ++++|+..|++.+..
T Consensus 258 ~~~p~~-----~~a~~~lg~a~~~~g-~~~~A~~~l~~al~l 293 (338)
T 2if4_A 258 TEEEKN-----PKALFRRGKAKAELG-QMDSARDDFRKAQKY 293 (338)
T ss_dssp HHCTTC-----HHHHHHHHHHHHTTT-CHHHHHHHHHHTTC-
T ss_pred HhCCCC-----HHHHHHHHHHHHHcC-CHHHHHHHHHHHHHH
Confidence 998763 234456999999998 999999999999876
No 182
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.49 E-value=6.3e-07 Score=65.33 Aligned_cols=70 Identities=16% Similarity=0.161 Sum_probs=60.7
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 51 INKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 51 L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
.+|+++.++..+|.++..+|++++|+..++++....|..+ ..|..+|.++...| ++++|++.|++.+...
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~-----~a~~~lg~~~~~~g-~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYV-----GTYYHLGKLYERLD-RTDDAIDTYAQGIEVA 71 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH-----HHHHHHHHHHHHcC-CHHHHHHHHHHHHhhh
Confidence 4899999999999999999999999999999999998854 24556999999998 9999999999998763
No 183
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.47 E-value=1.2e-06 Score=79.76 Aligned_cols=133 Identities=11% Similarity=0.074 Sum_probs=115.5
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-C-CHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELG-QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHD-C-CFKEAVQF 78 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g-~~~~Ae~~arrAL~L~P~dawA~halahvl~~~-G-r~~egi~~ 78 (235)
+..++++...++++..+|++..+....+.++...| .++++.+...++|..||++.++++..+.++... + ++++.+++
T Consensus 68 e~se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~ 147 (349)
T 3q7a_A 68 EKSERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEY 147 (349)
T ss_dssp CCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHH
Confidence 45678999999999999999999999999999999 599999999999999999999999999999998 8 99999999
Q ss_pred HHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHH--------HHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHh
Q 026637 79 MEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMR--------KVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYV 150 (235)
Q Consensus 79 l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~d--------eAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l 150 (235)
+++.....|. + .|.|-|.....-..| .++ ++++.+++.|... ..|.++--+|-.+
T Consensus 148 ~~k~L~~dpk-N----y~AW~~R~wvl~~l~-~~~~~~~~~~~eELe~~~k~I~~d-----------p~N~SAW~~R~~l 210 (349)
T 3q7a_A 148 IHGSLLPDPK-N----YHTWAYLHWLYSHFS-TLGRISEAQWGSELDWCNEMLRVD-----------GRNNSAWGWRWYL 210 (349)
T ss_dssp HHHHTSSCTT-C----HHHHHHHHHHHHHHH-HTTCCCHHHHHHHHHHHHHHHHHC-----------TTCHHHHHHHHHH
T ss_pred HHHHHHhCCC-C----HHHHHHHHHHHHHhc-cccccchhhHHHHHHHHHHHHHhC-----------CCCHHHHHHHHHH
Confidence 9999999888 3 477777776665555 566 9999999998873 2466777777666
Q ss_pred c
Q 026637 151 R 151 (235)
Q Consensus 151 ~ 151 (235)
.
T Consensus 211 L 211 (349)
T 3q7a_A 211 R 211 (349)
T ss_dssp H
T ss_pred H
Confidence 4
No 184
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.46 E-value=3.9e-06 Score=75.89 Aligned_cols=115 Identities=13% Similarity=0.120 Sum_probs=104.7
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCC----------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC--H
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQ----------MSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCC--F 72 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~----------~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr--~ 72 (235)
++++....+++..+|++..+.+..+.++...+. ++++.+...++|..||++.++++..+.++...|+ +
T Consensus 47 ~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~ 126 (331)
T 3dss_A 47 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNW 126 (331)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCH
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccH
Confidence 579999999999999999999999999988776 7899999999999999999999999999999995 8
Q ss_pred HHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCC-HHHHHHHHHhhchh
Q 026637 73 KEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSP-MRKVLEIYDNHIWK 125 (235)
Q Consensus 73 ~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~-~deAl~~yd~~i~~ 125 (235)
++.++++++.....|. | .|.|-|........| . ++++++.+++.|..
T Consensus 127 ~~EL~~~~k~l~~dpr-N----y~AW~~R~~vl~~l~-~~~~eel~~~~~~I~~ 174 (331)
T 3dss_A 127 ARELELCARFLEADER-N----FHCWDYRRFVAAQAA-VAPAEELAFTDSLITR 174 (331)
T ss_dssp HHHHHHHHHHHHHCTT-C----HHHHHHHHHHHHHTT-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCC-C----HHHHHHHHHHHHHhC-cCHHHHHHHHHHHHHH
Confidence 9999999999999988 4 578878887777777 6 69999999999987
No 185
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.41 E-value=1e-05 Score=74.42 Aligned_cols=110 Identities=8% Similarity=-0.004 Sum_probs=57.6
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHh----CCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-H--HHcCCHHHHH
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLEL----GQMSDAEEAAKKGLKINKHDCWSQHALCHV-L--QHDCCFKEAV 76 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~----g~~~~Ae~~arrAL~L~P~dawA~halahv-l--~~~Gr~~egi 76 (235)
.++++..+++++...|.++..+..+|..+... +++++|.+.+++|. |+++.++..+|.+ + ...|++++|+
T Consensus 195 ~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~ 271 (452)
T 3e4b_A 195 QAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMM 271 (452)
T ss_dssp HHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHH
Confidence 34555556666655555555555555555433 45566666666655 5666666666655 3 3455666666
Q ss_pred HHHHHchhhhccCCcchhHHHHHHHHHHHHhCC---CCHHHHHHHHHhhc
Q 026637 77 QFMEECSSTWSSCSSFMYTHNWWHVALCYLEGH---SPMRKVLEIYDNHI 123 (235)
Q Consensus 77 ~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G---~~~deAl~~yd~~i 123 (235)
.+++++.... ....++ .++.+|.... .++++|+++|.+.+
T Consensus 272 ~~~~~Aa~~g-----~~~A~~--~Lg~~y~~G~g~~~d~~~A~~~~~~Aa 314 (452)
T 3e4b_A 272 KYLDNGRAAD-----QPRAEL--LLGKLYYEGKWVPADAKAAEAHFEKAV 314 (452)
T ss_dssp HHHHHHHHTT-----CHHHHH--HHHHHHHHCSSSCCCHHHHHHHHHTTT
T ss_pred HHHHHHHHCC-----CHHHHH--HHHHHHHcCCCCCCCHHHHHHHHHHHh
Confidence 6665554332 111222 2555554310 14566666665555
No 186
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.40 E-value=1.8e-06 Score=63.73 Aligned_cols=72 Identities=11% Similarity=0.013 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHHHhCC---HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccC
Q 026637 18 NQQEDFIFGILAFSLLELGQ---MSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSC 89 (235)
Q Consensus 18 ~p~~~~~~g~~Af~L~e~g~---~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~ 89 (235)
+|+++.+++.+|-++...++ .++|+...++||+++|+++-+...+|.+++.+|++++|+..+++.....|..
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68899999999999976665 7999999999999999999999999999999999999999999998888773
No 187
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.36 E-value=4.6e-05 Score=70.07 Aligned_cols=93 Identities=14% Similarity=0.063 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHhC---CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHchhhhccCCcchhHH
Q 026637 24 IFGILAFSLLELG---QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHD----CCFKEAVQFMEECSSTWSSCSSFMYTH 96 (235)
Q Consensus 24 ~~g~~Af~L~e~g---~~~~Ae~~arrAL~L~P~dawA~halahvl~~~----Gr~~egi~~l~~a~~~w~~~~~~l~~H 96 (235)
++..+|..+...| ++++|.+.+++|++.+|.++.++..+|.++... +++++|+.+++++. |..+ ..+
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~---~a~ 251 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYP---ASW 251 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGST---HHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCH---HHH
Confidence 6667777777777 777777777777777777777777777777544 57777777777766 3322 233
Q ss_pred HHHHHHHHH---HhCCCCHHHHHHHHHhhchh
Q 026637 97 NWWHVALCY---LEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 97 ~~WHlAL~~---le~G~~~deAl~~yd~~i~~ 125 (235)
+ .++.++ ...| ++++|+++|.+.+..
T Consensus 252 ~--~Lg~~~~~~~~~~-d~~~A~~~~~~Aa~~ 280 (452)
T 3e4b_A 252 V--SLAQLLYDFPELG-DVEQMMKYLDNGRAA 280 (452)
T ss_dssp H--HHHHHHHHSGGGC-CHHHHHHHHHHHHHT
T ss_pred H--HHHHHHHhCCCCC-CHHHHHHHHHHHHHC
Confidence 3 366653 3455 677777777776654
No 188
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.34 E-value=2.1e-06 Score=78.90 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=70.1
Q ss_pred hhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccC
Q 026637 13 QVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSC 89 (235)
Q Consensus 13 ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~ 89 (235)
.+++..|.++.++..+++.+.-.|++++|++.++||+++|| +..++..+|.++++.|++++|++.++++.+..|..
T Consensus 268 ~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 268 VTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp HTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred HhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 45677899999999999999989999999999999999997 47788899999999999999999999999998774
No 189
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.32 E-value=2e-06 Score=82.42 Aligned_cols=116 Identities=13% Similarity=0.084 Sum_probs=101.5
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHH
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELG--QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDC-CFKEAVQFME 80 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g--~~~~Ae~~arrAL~L~P~dawA~halahvl~~~G-r~~egi~~l~ 80 (235)
.++++..+++++..+|.+..++...++++...| ++++|.+...++++++|++..|++..+.|+...| +.++++++.+
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~ 168 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 168 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHH
Confidence 688999999999999999999999999999999 7799999999999999999999999999999999 9999999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhC--------------CCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEG--------------HSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~--------------G~~~deAl~~yd~~i~~ 125 (235)
+++...|+.. --|-|.+..+... + .++++++.|+++|..
T Consensus 169 ~~I~~~p~n~-----saW~~r~~ll~~l~~~~~~~~~~~~~~~-~~~eel~~~~~ai~~ 221 (567)
T 1dce_A 169 SLITRNFSNY-----SSWHYRSCLLPQLHPQPDSGPQGRLPEN-VLLKELELVQNAFFT 221 (567)
T ss_dssp TTTTTTCCCH-----HHHHHHHHHHHHHSCCCCSSSCCSSCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCc-----cHHHHHHHHHHhhcccccccccccccHH-HHHHHHHHHHHHHhh
Confidence 9999988832 2233344444332 4 689999999999976
No 190
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.29 E-value=1.8e-05 Score=72.00 Aligned_cols=119 Identities=8% Similarity=0.012 Sum_probs=105.8
Q ss_pred CC-ChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHh-C-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH----
Q 026637 1 MG-RPDLCFDIIHQVLPYNQQEDFIFGILAFSLLEL-G-QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFK---- 73 (235)
Q Consensus 1 ~G-~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~-g-~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~---- 73 (235)
+| +.++.+..+++++..+|.+..+....++++... + +++++.+...++|+++|+|..|++-.+.|+...|+.+
T Consensus 101 l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~ 180 (349)
T 3q7a_A 101 LNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISE 180 (349)
T ss_dssp TTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCH
T ss_pred hhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccch
Confidence 35 478999999999999999999999999999998 8 9999999999999999999999999999999999998
Q ss_pred ----HHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCC-------HHHHHHHHHhhchh
Q 026637 74 ----EAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSP-------MRKVLEIYDNHIWK 125 (235)
Q Consensus 74 ----egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~-------~deAl~~yd~~i~~ 125 (235)
+.+++.++.....|+ + .+-|-|.+......| + ++++++.+++.|..
T Consensus 181 ~~~~eELe~~~k~I~~dp~-N----~SAW~~R~~lL~~l~-~~~~~~~~~~eELe~~~~aI~~ 237 (349)
T 3q7a_A 181 AQWGSELDWCNEMLRVDGR-N----NSAWGWRWYLRVSRP-GAETSSRSLQDELIYILKSIHL 237 (349)
T ss_dssp HHHHHHHHHHHHHHHHCTT-C----HHHHHHHHHHHTTST-TCCCCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCC-C----HHHHHHHHHHHHhcc-ccccchHHHHHHHHHHHHHHHh
Confidence 999999999999887 3 355556666665565 5 79999999999987
No 191
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.28 E-value=0.00013 Score=66.83 Aligned_cols=112 Identities=12% Similarity=0.004 Sum_probs=68.1
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHH----hCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLE----LGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH----DCCFK 73 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e----~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~----~Gr~~ 73 (235)
|+.++++...++++.. +++.++..+|..+.. .+++++|.+.+++|++. +++.++..+|.++.. .++++
T Consensus 57 ~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~ 132 (490)
T 2xm6_A 57 KDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKA 132 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred cCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 4566666666666654 556666666666666 66777777777776553 466666677776666 66677
Q ss_pred HHHHHHHHchhhhccCCcchhHHHHHHHHHHHHh----CCCCHHHHHHHHHhhchh
Q 026637 74 EAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLE----GHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 74 egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le----~G~~~deAl~~yd~~i~~ 125 (235)
+|+.+++++..... + ...+ .+|.+|.. .+ ++++|+++|.+.+..
T Consensus 133 ~A~~~~~~a~~~~~--~---~a~~--~Lg~~y~~g~g~~~-d~~~A~~~~~~a~~~ 180 (490)
T 2xm6_A 133 ESVKWFRLAAEQGR--D---SGQQ--SMGDAYFEGDGVTR-DYVMAREWYSKAAEQ 180 (490)
T ss_dssp HHHHHHHHHHHTTC--H---HHHH--HHHHHHHHTSSSCC-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCC--H---HHHH--HHHHHHHcCCCCCC-CHHHHHHHHHHHHHC
Confidence 77777666654311 1 1222 36666654 44 566666666665543
No 192
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.27 E-value=1.4e-06 Score=82.45 Aligned_cols=121 Identities=10% Similarity=-0.089 Sum_probs=96.1
Q ss_pred CChhhHHHHHHhhcCC-----CCCCh---hHHHHHHHHHHHhCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPY-----NQQED---FIFGILAFSLLELGQMSDAEEAAKKGLKI--------NKHDCWSQHALCHV 65 (235)
Q Consensus 2 G~~~~al~~~~ral~~-----~p~~~---~~~g~~Af~L~e~g~~~~Ae~~arrAL~L--------~P~dawA~halahv 65 (235)
|++++|+...+++|.. -|+++ ..++++|.++..+|+|++|+..++++|++ .|+-+.++.++|.+
T Consensus 323 g~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~ 402 (490)
T 3n71_A 323 GLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLT 402 (490)
T ss_dssp TCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 7888999888888874 24454 57888999999999999999999999986 35556889999999
Q ss_pred HHHcCCHHHHHHHHHHchhhhcc-----CCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 66 LQHDCCFKEAVQFMEECSSTWSS-----CSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 66 l~~~Gr~~egi~~l~~a~~~w~~-----~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+..+|++++|+..++++...... .|.... ..=.++.+++++| .|.+|..+|.++...
T Consensus 403 ~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~--~~~~l~~~~~e~~-~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 403 NWHAGHIEVGHGMICKAYAILLVTHGPSHPITKD--LEAMRMQTEMELR-MFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHH--HHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHH--HHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 99999999999999999765433 121111 2224888999998 899999999876443
No 193
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.27 E-value=0.00016 Score=66.17 Aligned_cols=112 Identities=5% Similarity=-0.101 Sum_probs=75.5
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHH----hCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLE----LGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH----DCCFK 73 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e----~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~----~Gr~~ 73 (235)
++.++++...++++.. +++.++..+|..+.. .+++++|+..+++|++. +++.+...+|.++.. .++++
T Consensus 93 ~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~d~~ 168 (490)
T 2xm6_A 93 QDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQ--GRDSGQQSMGDAYFEGDGVTRDYV 168 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHH
Confidence 5667777777777653 566777777777777 67777777777777654 577777777777776 67777
Q ss_pred HHHHHHHHchhhhccCCcchhHHHHHHHHHHHHh----CCCCHHHHHHHHHhhchh
Q 026637 74 EAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLE----GHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 74 egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le----~G~~~deAl~~yd~~i~~ 125 (235)
+|+.+++++...- .+ ..+ ..++.+|.. .+ ++++|+++|.+.+..
T Consensus 169 ~A~~~~~~a~~~~--~~---~a~--~~Lg~~y~~g~g~~~-~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 169 MAREWYSKAAEQG--NV---WSC--NQLGYMYSRGLGVER-NDAISAQWYRKSATS 216 (490)
T ss_dssp HHHHHHHHHHHTT--CH---HHH--HHHHHHHHHTSSSCC-CHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCC--CH---HHH--HHHHHHHhcCCCCCc-CHHHHHHHHHHHHHC
Confidence 7777777776541 11 122 237777765 55 677777777766554
No 194
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.20 E-value=6.9e-06 Score=77.70 Aligned_cols=92 Identities=8% Similarity=-0.027 Sum_probs=74.7
Q ss_pred HHHhCCHHHHHHHHHHHHhh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc-----CCcchhHHHH
Q 026637 32 LLELGQMSDAEEAAKKGLKI-----NKH---DCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSS-----CSSFMYTHNW 98 (235)
Q Consensus 32 L~e~g~~~~Ae~~arrAL~L-----~P~---dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~-----~~~~l~~H~~ 98 (235)
+..+|+|++|+.+.+++|++ -|+ -+.++.++|.++..+|++++|+..++++...+.. .|.. ....
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~--a~~l 396 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQL--GMAV 396 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHH--HHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHH--HHHH
Confidence 56789999999999999985 344 4578899999999999999999999999766532 2222 2233
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 99 WHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 99 WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
-++|..|..+| +|++|+.+|.+++...
T Consensus 397 ~nLa~~~~~~G-~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 397 MRAGLTNWHAG-HIEVGHGMICKAYAIL 423 (490)
T ss_dssp HHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCC-CHHHHHHHHHHHHHHH
Confidence 46999999998 9999999999988774
No 195
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.19 E-value=1.3e-05 Score=62.07 Aligned_cols=109 Identities=6% Similarity=-0.037 Sum_probs=91.9
Q ss_pred ChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHH
Q 026637 3 RPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH----DCCFKEAVQF 78 (235)
Q Consensus 3 ~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~----~Gr~~egi~~ 78 (235)
|.++++...+++....+..+. +|..+...+.+++|.+..++|.+. +++.+...+|.++.. .+++++|+.+
T Consensus 10 d~~~A~~~~~~aa~~g~~~a~----lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~ 83 (138)
T 1klx_A 10 DLKKAIQYYVKACELNEMFGC----LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQY 83 (138)
T ss_dssp HHHHHHHHHHHHHHTTCTTHH----HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCHhhh----HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 568899999999987654444 788888888999999999999987 899999999999999 9999999999
Q ss_pred HHHchhhhccCCcchhHHHHHHHHHHHHh----CCCCHHHHHHHHHhhchh
Q 026637 79 MEECSSTWSSCSSFMYTHNWWHVALCYLE----GHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 79 l~~a~~~w~~~~~~l~~H~~WHlAL~~le----~G~~~deAl~~yd~~i~~ 125 (235)
++++...-. + ...+ +++.+|.. .+ ++++|+.+|.+.+..
T Consensus 84 ~~~Aa~~g~--~---~a~~--~Lg~~y~~G~g~~~-d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 84 YSKACGLND--Q---DGCL--ILGYKQYAGKGVVK-NEKQAVKTFEKACRL 126 (138)
T ss_dssp HHHHHHTTC--H---HHHH--HHHHHHHHTSSSCC-CHHHHHHHHHHHHHT
T ss_pred HHHHHcCCC--H---HHHH--HHHHHHHCCCCCCc-CHHHHHHHHHHHHHC
Confidence 999987621 1 2333 49999988 66 899999999998876
No 196
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.17 E-value=2.3e-06 Score=76.51 Aligned_cols=87 Identities=8% Similarity=-0.058 Sum_probs=78.6
Q ss_pred ChhhHHHHHHhhcCCCCC--ChhHHHHHHHHHHH-----hCCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHH-cCCHH
Q 026637 3 RPDLCFDIIHQVLPYNQQ--EDFIFGILAFSLLE-----LGQMSDAEEAAKKGLKINKHD-CWSQHALCHVLQH-DCCFK 73 (235)
Q Consensus 3 ~~~~al~~~~ral~~~p~--~~~~~g~~Af~L~e-----~g~~~~Ae~~arrAL~L~P~d-awA~halahvl~~-~Gr~~ 73 (235)
..+.+++.++||+.++|+ ++-+|..+|..+.. -|+.++|++.++|||+|||+. +.+....|..+.. +|+.+
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~ 257 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRA 257 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHH
Confidence 356889999999999999 66799999999988 499999999999999999975 9999999999988 49999
Q ss_pred HHHHHHHHchhhhccC
Q 026637 74 EAVQFMEECSSTWSSC 89 (235)
Q Consensus 74 egi~~l~~a~~~w~~~ 89 (235)
++.+.++++...-|+.
T Consensus 258 ~a~~~L~kAL~a~p~~ 273 (301)
T 3u64_A 258 GFDEALDRALAIDPES 273 (301)
T ss_dssp HHHHHHHHHHHCCGGG
T ss_pred HHHHHHHHHHcCCCCC
Confidence 9999999999988774
No 197
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.16 E-value=0.00011 Score=66.27 Aligned_cols=116 Identities=13% Similarity=0.083 Sum_probs=99.1
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHH
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELG--QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCC-FKEAVQFME 80 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g--~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr-~~egi~~l~ 80 (235)
..+.+..+.+++..+|.+..+....++++...| .++++.+...++++++|+|..|++-.+.|+...|+ .++.+++.+
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~ 169 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 169 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 467889999999999999999999999999999 49999999999999999999999999999999999 599999999
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhC--------------CCCHHHHHHHHHhhchh
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEG--------------HSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~--------------G~~~deAl~~yd~~i~~ 125 (235)
+++...|+.. .-|-|.+...... + .++++++.+++.|..
T Consensus 170 ~~I~~~p~N~-----SAW~~R~~ll~~l~~~~~~~~~~~~~~~-~~~eEle~~~~ai~~ 222 (331)
T 3dss_A 170 SLITRNFSNY-----SSWHYRSCLLPQLHPQPDSGPQGRLPEN-VLLKELELVQNAFFT 222 (331)
T ss_dssp HHHHHCSCCH-----HHHHHHHHHHHHHSCCC------CCCHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCH-----HHHHHHHHHHHHhhhccccccccccchH-HHHHHHHHHHHHHHh
Confidence 9999988832 2233343333222 3 589999999999987
No 198
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.01 E-value=1.2e-05 Score=74.83 Aligned_cols=89 Identities=9% Similarity=0.008 Sum_probs=72.5
Q ss_pred hCCHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc-----CCcchhHHHHHHH
Q 026637 35 LGQMSDAEEAAKKGLKI-----NKHD---CWSQHALCHVLQHDCCFKEAVQFMEECSSTWSS-----CSSFMYTHNWWHV 101 (235)
Q Consensus 35 ~g~~~~Ae~~arrAL~L-----~P~d---awA~halahvl~~~Gr~~egi~~l~~a~~~w~~-----~~~~l~~H~~WHl 101 (235)
.|+|++|+.+.+++|++ -|++ +..+.++|.++..+|++++|+..++++...+.. .|.. +.-.-++
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~--a~~l~nL 388 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNV--ASMWLKL 388 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHH--HHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHH--HHHHHHH
Confidence 57899999999999984 4555 466789999999999999999999999766533 2222 2234469
Q ss_pred HHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 102 ALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 102 AL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
|..|..+| +|++|+.+|.+++...
T Consensus 389 a~~~~~qg-~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 389 GRLYMGLE-NKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHhcc-CHHHHHHHHHHHHHHH
Confidence 99999998 9999999999998875
No 199
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.92 E-value=1.4e-05 Score=74.45 Aligned_cols=88 Identities=8% Similarity=-0.069 Sum_probs=75.3
Q ss_pred CCChhhHHHHHHhhcCC-----CCCChh---HHHHHHHHHHHhCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY-----NQQEDF---IFGILAFSLLELGQMSDAEEAAKKGLKI--------NKHDCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~-----~p~~~~---~~g~~Af~L~e~g~~~~Ae~~arrAL~L--------~P~dawA~halah 64 (235)
.|+.++|+...+++|.. -|++++ .+.++|.++..+|+|++|+..++++|++ .|+-+..+.++|.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 37889999999998873 456664 6778899999999999999999999986 5566788999999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhcc
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~ 88 (235)
++..+|+++||+..++++......
T Consensus 391 ~~~~qg~~~eA~~~~~~Al~i~~~ 414 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAIAIMEV 414 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999877643
No 200
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.90 E-value=8.8e-05 Score=66.51 Aligned_cols=114 Identities=11% Similarity=0.021 Sum_probs=63.5
Q ss_pred CChhhHHHHHHhhcCCCC--CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCC------CCHHHHHHHHHHHHHcC--C
Q 026637 2 GRPDLCFDIIHQVLPYNQ--QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINK------HDCWSQHALCHVLQHDC--C 71 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p--~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P------~dawA~halahvl~~~G--r 71 (235)
|+.++|+..+.+.+...| ++..+..+.+.++...|+.+.|++..++..+.+| +.....-+-++|...+| +
T Consensus 114 g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~~ 193 (310)
T 3mv2_B 114 GDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKET 193 (310)
T ss_dssp TCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCST
T ss_pred CCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCcc
Confidence 566666666666666554 5555666666666666666666666666666666 23334444455555555 6
Q ss_pred HHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhh
Q 026637 72 FKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNH 122 (235)
Q Consensus 72 ~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~ 122 (235)
..++..++++.....|. +-.....|. +++.+| ++++|.++++..
T Consensus 194 ~q~A~~~f~El~~~~p~---~~~~~lLln---~~~~~g-~~~eAe~~L~~l 237 (310)
T 3mv2_B 194 ATSNFYYYEELSQTFPT---WKTQLGLLN---LHLQQR-NIAEAQGIVELL 237 (310)
T ss_dssp TTHHHHHHHHHHTTSCS---HHHHHHHHH---HHHHHT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC---cccHHHHHH---HHHHcC-CHHHHHHHHHHH
Confidence 66666666665544432 000122222 455555 666666666543
No 201
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.90 E-value=0.00015 Score=64.11 Aligned_cols=146 Identities=10% Similarity=0.015 Sum_probs=112.2
Q ss_pred CChhhHHHHHHhhcCCCCCCh-----------------hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHH------
Q 026637 2 GRPDLCFDIIHQVLPYNQQED-----------------FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWS------ 58 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~-----------------~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA------ 58 (235)
|+..+|++...+++...|... .++..+|-.+...|++++|.+...+++.+.+....+
T Consensus 18 ~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 97 (434)
T 4b4t_Q 18 KQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVL 97 (434)
T ss_dssp TCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHH
Confidence 789999999999998776533 247788999999999999999999999988876554
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHchhhhccCC-cchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHh
Q 026637 59 QHALCHVLQHDCCFKEAVQFMEECSSTWSSCS-SFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEV 137 (235)
Q Consensus 59 ~halahvl~~~Gr~~egi~~l~~a~~~w~~~~-~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~ 137 (235)
...++.++...|+.++++.+++.+....+... .+.....+-.+|..+.+.| +|++|+.++.+.+... .+. .....
T Consensus 98 ~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g-~~~~A~~~l~~~~~~~-~~~--~~~~~ 173 (434)
T 4b4t_Q 98 KTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKK-QYKDSLALINDLLREF-KKL--DDKPS 173 (434)
T ss_dssp HHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHH-TTS--SCSTH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHcc-ChHHHHHHHHHHHHHH-Hhc--ccchh
Confidence 34578888899999999999999866544322 2334456667999999998 9999999998877653 222 22334
Q ss_pred HhHHHHHHHHHHhc
Q 026637 138 YLNALGLLLRVYVR 151 (235)
Q Consensus 138 ~~da~sLL~Rl~l~ 151 (235)
.++....+.|+.+.
T Consensus 174 ~~~~~~~~~~~~~~ 187 (434)
T 4b4t_Q 174 LVDVHLLESKVYHK 187 (434)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 56777777777764
No 202
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.88 E-value=5.3e-05 Score=70.27 Aligned_cols=92 Identities=5% Similarity=-0.124 Sum_probs=74.8
Q ss_pred HHHhCCHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc-----CCcchhHHHH
Q 026637 32 LLELGQMSDAEEAAKKGLKI-----NKHD---CWSQHALCHVLQHDCCFKEAVQFMEECSSTWSS-----CSSFMYTHNW 98 (235)
Q Consensus 32 L~e~g~~~~Ae~~arrAL~L-----~P~d---awA~halahvl~~~Gr~~egi~~l~~a~~~w~~-----~~~~l~~H~~ 98 (235)
+...|+|++|++.++++|++ -|++ +..+.+++.++..+|++++|+.+.+++...+.. .|. .+...
T Consensus 297 ~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~--~a~~l 374 (429)
T 3qwp_A 297 LKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPV--RGVQV 374 (429)
T ss_dssp HHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHH--HHHHH
T ss_pred HHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChH--HHHHH
Confidence 44689999999999999975 4555 467889999999999999999999999765532 222 23345
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 99 WHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 99 WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
..+|..|..+| ++++|+.+|.+++...
T Consensus 375 ~nLa~~~~~~g-~~~eA~~~~~~Al~i~ 401 (429)
T 3qwp_A 375 MKVGKLQLHQG-MFPQAMKNLRLAFDIM 401 (429)
T ss_dssp HHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC-CHHHHHHHHHHHHHHH
Confidence 57999999998 9999999999998875
No 203
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.76 E-value=3.8e-05 Score=56.43 Aligned_cols=56 Identities=13% Similarity=0.015 Sum_probs=53.4
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHH
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQ 59 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~ 59 (235)
.+++...+++++..+|+++.++.++|+...+.|+|++|+...++.++.+|.++|.-
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~~~ 80 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLDRV 80 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCCHH
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCccHH
Confidence 68999999999999999999999999999999999999999999999999988753
No 204
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.74 E-value=0.00023 Score=75.12 Aligned_cols=74 Identities=18% Similarity=0.273 Sum_probs=63.9
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.+++.+.++|+ +++.+++.+|.+++..|++.+|+..+.+| +|+.++..++.++...|+++++++++..
T Consensus 1090 ~nldrAiE~Aerv-----n~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~m 1159 (1630)
T 1xi4_A 1090 GNLDRAYEFAERC-----NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQM 1159 (1630)
T ss_pred hhHHHHHHHHHhc-----CCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4555666666655 67899999999999999999999999887 9999999999999999999999999977
Q ss_pred chhh
Q 026637 82 CSST 85 (235)
Q Consensus 82 a~~~ 85 (235)
+...
T Consensus 1160 Ark~ 1163 (1630)
T 1xi4_A 1160 ARKK 1163 (1630)
T ss_pred HHhh
Confidence 6543
No 205
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.70 E-value=0.00036 Score=62.29 Aligned_cols=110 Identities=11% Similarity=-0.036 Sum_probs=83.8
Q ss_pred HhhcC-CCCCChhHHHHHHHHHHH-----hC------CHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-----CCH
Q 026637 12 HQVLP-YNQQEDFIFGILAFSLLE-----LG------QMSDAEEAAKKGLKINKH--DCWSQHALCHVLQHD-----CCF 72 (235)
Q Consensus 12 ~ral~-~~p~~~~~~g~~Af~L~e-----~g------~~~~Ae~~arrAL~L~P~--dawA~halahvl~~~-----Gr~ 72 (235)
..++. ..|+++.++.-.|.++.. .| ...+|+.+.+||++++|+ ++-++..+|-.+... |+.
T Consensus 141 ~~~l~~~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ 220 (301)
T 3u64_A 141 HKVLSRCTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGM 220 (301)
T ss_dssp HHHHTTCCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCH
T ss_pred HHHHHHcCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCH
Confidence 33444 456666555555544422 23 356799999999999999 888999999998884 999
Q ss_pred HHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhC-CCCHHHHHHHHHhhchhh
Q 026637 73 KEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEG-HSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 73 ~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~-G~~~deAl~~yd~~i~~~ 126 (235)
++|...++++....|+.+ +-.++. .|-++... | +++++.+.+++++...
T Consensus 221 ekA~~~ferAL~LnP~~~--id~~v~--YA~~l~~~~g-d~~~a~~~L~kAL~a~ 270 (301)
T 3u64_A 221 EKAHTAFEHLTRYCSAHD--PDHHIT--YADALCIPLN-NRAGFDEALDRALAID 270 (301)
T ss_dssp HHHHHHHHHHHHHCCTTC--SHHHHH--HHHHTTTTTT-CHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhCCCCC--chHHHH--HHHHHHHhcC-CHHHHHHHHHHHHcCC
Confidence 999999999999998632 234554 78888774 6 9999999999999874
No 206
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.63 E-value=0.0067 Score=64.23 Aligned_cols=106 Identities=7% Similarity=-0.028 Sum_probs=77.5
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC-------------------------
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------------------------- 55 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------------------------- 55 (235)
.|+.++|.++..++ +++..+.-.+..+.+.|+|++|.+....|...+|+.
T Consensus 1118 ~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~ 1192 (1630)
T 1xi4_A 1118 KGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFING 1192 (1630)
T ss_pred CCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhC
Confidence 47788888888775 667777778888888888888888887777666332
Q ss_pred --HHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 56 --CWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 56 --awA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
...+..+|..++..|++++|+.++.++ -+|..+|.++..+| ++++|++.|.++..+
T Consensus 1193 ~n~ad~~~iGd~le~eg~YeeA~~~Y~kA-------------~ny~rLA~tLvkLg-e~q~AIEaarKA~n~ 1250 (1630)
T 1xi4_A 1193 PNNAHIQQVGDRCYDEKMYDAAKLLYNNV-------------SNFGRLASTLVHLG-EYQAAVDGARKANST 1250 (1630)
T ss_pred CCHHHHHHHHHHHHhcCCHHHHHHHHHhh-------------hHHHHHHHHHHHhC-CHHHHHHHHHHhCCH
Confidence 224455777777777777777776653 26667888888887 899999999877554
No 207
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.58 E-value=0.00013 Score=67.57 Aligned_cols=88 Identities=7% Similarity=0.057 Sum_probs=73.9
Q ss_pred CCChhhHHHHHHhhcCC-----CCCChh---HHHHHHHHHHHhCCHHHHHHHHHHHHhh-----CCC---CHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPY-----NQQEDF---IFGILAFSLLELGQMSDAEEAAKKGLKI-----NKH---DCWSQHALCH 64 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~-----~p~~~~---~~g~~Af~L~e~g~~~~Ae~~arrAL~L-----~P~---dawA~halah 64 (235)
.|+.++++...++++.. -|++++ .+.++|.++..+|+|++|+..++++|++ -|+ -+..+.++|.
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 37889999999999875 345554 6788888999999999999999999975 244 4577889999
Q ss_pred HHHHcCCHHHHHHHHHHchhhhcc
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~ 88 (235)
++..+|++++|+..++++......
T Consensus 380 ~~~~~g~~~eA~~~~~~Al~i~~~ 403 (429)
T 3qwp_A 380 LQLHQGMFPQAMKNLRLAFDIMRV 403 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999776544
No 208
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.58 E-value=0.00027 Score=62.38 Aligned_cols=124 Identities=10% Similarity=0.035 Sum_probs=97.9
Q ss_pred CChhhHHHHHHhhcCCCCCCh------hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHc
Q 026637 2 GRPDLCFDIIHQVLPYNQQED------FIFGILAFSLLELGQMSDAEEAAKKGLKINKHD------CWSQHALCHVLQHD 69 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~------~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~d------awA~halahvl~~~ 69 (235)
|+++++...+.++++..+..+ .+..+++......|.+++|....++++...+.. +.....+|.++..+
T Consensus 69 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 148 (434)
T 4b4t_Q 69 GAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQK 148 (434)
T ss_dssp TCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHc
Confidence 889999999999998755432 466778888888999999999999999875543 56889999999999
Q ss_pred CCHHHHHHHHHHchhhhccCCc-chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 70 CCFKEAVQFMEECSSTWSSCSS-FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 70 Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
|++++|+..+++....-...+. ....-.+.-.+..++..| ++++|..+|++.+...
T Consensus 149 g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 149 KQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLR-NLAKSKASLTAARTAA 205 (434)
T ss_dssp TCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHh
Confidence 9999999999998655333211 112234445888899998 9999999999887653
No 209
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.55 E-value=0.00035 Score=65.62 Aligned_cols=200 Identities=10% Similarity=-0.001 Sum_probs=87.9
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.+++....+.+... ..++.+...+++.+..+|+++++++..+ .|+. .++..+|..+...|++++|+.++.
T Consensus 74 ~g~~EeAi~yl~~ark~-~~~~~i~~~Li~~Y~Klg~l~e~e~f~~-----~pn~-~a~~~IGd~~~~~g~yeeA~~~Y~ 146 (449)
T 1b89_A 74 SGNWEELVKYLQMARKK-ARESYVETELIFALAKTNRLAELEEFIN-----GPNN-AHIQQVGDRCYDEKMYDAAKLLYN 146 (449)
T ss_dssp ------------------------------------CHHHHTTTTT-----CC-----------------CTTTHHHHHH
T ss_pred CCCHHHHHHHHHHHHHh-CccchhHHHHHHHHHHhCCHHHHHHHHc-----CCcH-HHHHHHHHHHHHcCCHHHHHHHHH
Confidence 36667777766666664 3336677777778888888888777664 3544 488888888888888888888887
Q ss_pred HchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHH--HHHH-hcCccc--
Q 026637 81 ECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLL--LRVY-VRGELD-- 155 (235)
Q Consensus 81 ~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL--~Rl~-l~G~~~-- 155 (235)
+. .+|.-+|.++..+| +|++|++.|.++..+. .-..+++++--+ ||+- ..|...
T Consensus 147 ~a-------------~n~~~LA~~L~~Lg-~yq~AVea~~KA~~~~-------~Wk~v~~aCv~~~ef~lA~~~~l~L~~ 205 (449)
T 1b89_A 147 NV-------------SNFGRLASTLVHLG-EYQAAVDGARKANSTR-------TWKEVCFACVDGKEFRLAQMCGLHIVV 205 (449)
T ss_dssp HT-------------TCHHHHHHHHHTTT-CHHHHHHHHHHHTCHH-------HHHHHHHHHHHTTCHHHHHHTTTTTTT
T ss_pred Hh-------------hhHHHHHHHHHHhc-cHHHHHHHHHHcCCch-------hHHHHHHHHHHcCcHHHHHHHHHHHHh
Confidence 55 25667999999998 9999999999885442 112233333222 1111 011100
Q ss_pred ------------ccccchHHHHHHHHhhh---cchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHhhcCch-HHHHHH
Q 026637 156 ------------VFGNRLKVLADCVADQA---NWYLECHLDLLILWALANTGEVSKAEDLLKGLKSRHSKMIK-KKQELM 219 (235)
Q Consensus 156 ------------~~g~rw~~la~~~~~~~---~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~~~~~~-~~~~~~ 219 (235)
.-..+|+++..++.... +.|...|.-+ +.+-++-. -+++.+.++.+.+..+- +.-+.+
T Consensus 206 ~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel----~il~~ky~--p~k~~ehl~~~~~~ini~k~~~~~ 279 (449)
T 1b89_A 206 HADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL----AILYSKFK--PQKMREHLELFWSRVNIPKVLRAA 279 (449)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHH----HHHHHTTC--HHHHHHHHHHHSTTSCHHHHHHHH
T ss_pred CHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHH----HHHHHhcC--HHHHHHHHHHHHHHhcCcHHHHHH
Confidence 00247888888877642 3355556555 44444433 58999999999876643 322333
Q ss_pred HHHHHHHHhhhhhhc
Q 026637 220 QTGVQVSSDICLICH 234 (235)
Q Consensus 220 ~~~~~l~~~~~~~~~ 234 (235)
...-+..+.+-+|||
T Consensus 280 ~~~~~w~e~~~ly~~ 294 (449)
T 1b89_A 280 EQAHLWAELVFLYDK 294 (449)
T ss_dssp HTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 333334445555554
No 210
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.52 E-value=0.00022 Score=52.48 Aligned_cols=66 Identities=14% Similarity=0.047 Sum_probs=54.1
Q ss_pred CCChhhHHHHHHhhcCCC-------CCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYN-------QQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVL 66 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~-------p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl 66 (235)
.|++..|..+.++|+... +..+.++..+|+++.+.|++++|....++|+.++|+++.+.+++...-
T Consensus 18 ~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~~~ 90 (104)
T 2v5f_A 18 EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYFE 90 (104)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHHHH
Confidence 477888888888888753 235678889999999999999999999999999999999988887433
No 211
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.49 E-value=0.00093 Score=51.41 Aligned_cols=79 Identities=13% Similarity=-0.037 Sum_probs=71.6
Q ss_pred ChhhHHHHHHhhcCCCCCChhHHHHHHHHHHH----hCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHH
Q 026637 3 RPDLCFDIIHQVLPYNQQEDFIFGILAFSLLE----LGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH----DCCFKE 74 (235)
Q Consensus 3 ~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e----~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~----~Gr~~e 74 (235)
..++++...+++... +++.+...+|..+.. .+++++|.+..++|.+. .++.+...++.++.. .++.++
T Consensus 40 ~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~ 115 (138)
T 1klx_A 40 NKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEKQ 115 (138)
T ss_dssp CHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred CHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHHH
Confidence 455688888888876 789999999999998 89999999999999987 899999999999999 999999
Q ss_pred HHHHHHHchhh
Q 026637 75 AVQFMEECSST 85 (235)
Q Consensus 75 gi~~l~~a~~~ 85 (235)
|+.|++++...
T Consensus 116 A~~~~~~Aa~~ 126 (138)
T 1klx_A 116 AVKTFEKACRL 126 (138)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHC
Confidence 99999999776
No 212
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.42 E-value=0.00059 Score=55.18 Aligned_cols=85 Identities=11% Similarity=0.035 Sum_probs=70.3
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHchhhh-ccCCcchhHHHHHHHHHHHHhCCCCH
Q 026637 37 QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDC---CFKEAVQFMEECSSTW-SSCSSFMYTHNWWHVALCYLEGHSPM 112 (235)
Q Consensus 37 ~~~~Ae~~arrAL~L~P~dawA~halahvl~~~G---r~~egi~~l~~a~~~w-~~~~~~l~~H~~WHlAL~~le~G~~~ 112 (235)
.+..+++.+.+.++.+|.+..+.+.+|+++.... ..++||..++...+.+ |..+ .-..-++|+.++..| +|
T Consensus 13 ~l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~----rd~lY~LAv~~~kl~-~Y 87 (152)
T 1pc2_A 13 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQ----RDYVFYLAVGNYRLK-EY 87 (152)
T ss_dssp HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHH----HHHHHHHHHHHHHTS-CH
T ss_pred HHHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccch----HHHHHHHHHHHHHcc-CH
Confidence 3566888899999999999999999999999988 6669999999998887 4211 122335999999998 99
Q ss_pred HHHHHHHHhhchhh
Q 026637 113 RKVLEIYDNHIWKE 126 (235)
Q Consensus 113 deAl~~yd~~i~~~ 126 (235)
++|++.+++.+..+
T Consensus 88 ~~A~~y~~~lL~ie 101 (152)
T 1pc2_A 88 EKALKYVRGLLQTE 101 (152)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999873
No 213
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.35 E-value=0.0048 Score=60.50 Aligned_cols=185 Identities=11% Similarity=-0.069 Sum_probs=125.4
Q ss_pred hHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHH-HHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 6 LCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAE-EAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 6 ~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae-~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
..+...++++...|.++.+..+++--+...|+.++|. ++..+|+..+|++..-+...+...+..|+++++...++++..
T Consensus 327 Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~ 406 (679)
T 4e6h_A 327 RMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCID 406 (679)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3456788999999999999999999999999999996 999999999999998888999999999999999999999976
Q ss_pred hhc--------cCCc---------chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh-hhcCCCCCchHhHhHHHHHHH
Q 026637 85 TWS--------SCSS---------FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK-ELEKPDAVHPEVYLNALGLLL 146 (235)
Q Consensus 85 ~w~--------~~~~---------~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~-~~~~~~~~~~~~~~da~sLL~ 146 (235)
.-+ +.|. +-..-+|-..+-+....| ..++|..+|++++.. . .. ....++..+.|-+
T Consensus 407 ~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~-~l~~AR~vf~~A~~~~~--~~---~~~lyi~~A~lE~ 480 (679)
T 4e6h_A 407 RIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQ-GLAASRKIFGKCRRLKK--LV---TPDIYLENAYIEY 480 (679)
T ss_dssp HHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHTGG--GS---CTHHHHHHHHHHH
T ss_pred HHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhcC--CC---ChHHHHHHHHHHH
Confidence 421 1121 001225655666665666 699999999999865 2 11 2444666666665
Q ss_pred HHHhcCcccccccchHHHHHHHHhhhc-chhcchhhHHHHHHHhcCCCchHHHHHHHHHH
Q 026637 147 RVYVRGELDVFGNRLKVLADCVADQAN-WYLECHLDLLILWALANTGEVSKAEDLLKGLK 205 (235)
Q Consensus 147 Rl~l~G~~~~~g~rw~~la~~~~~~~~-~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~ 205 (235)
++ |-+. ++-..|.+......+ +...+ +.|+--+...|+.+.++.+.+..-
T Consensus 481 ~~---~~d~---e~Ar~ife~~Lk~~p~~~~~w---~~y~~fe~~~~~~~~AR~lferal 531 (679)
T 4e6h_A 481 HI---SKDT---KTACKVLELGLKYFATDGEYI---NKYLDFLIYVNEESQVKSLFESSI 531 (679)
T ss_dssp TT---TSCC---HHHHHHHHHHHHHHTTCHHHH---HHHHHHHHHHTCHHHHHHHHHHHT
T ss_pred Hh---CCCH---HHHHHHHHHHHHHCCCchHHH---HHHHHHHHhCCCHHHHHHHHHHHH
Confidence 54 3221 344444443333222 22211 122222334578888888877543
No 214
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=97.24 E-value=0.002 Score=47.25 Aligned_cols=69 Identities=9% Similarity=-0.004 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCC--cchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 56 CWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCS--SFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 56 awA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~--~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+.--..+|.+++.+|+++.|+.|++.+...++..+ ++-...++-++|.+++..| ++++|+..|.+.+.-
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g-~~~~A~~~~~~al~l 75 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQG-DLDKALLLTKKLLEL 75 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHcc-CHHHHHHHHHHHHhc
Confidence 34456899999999999999999999988875432 2334556677999999998 999999999998866
No 215
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.23 E-value=0.0018 Score=57.88 Aligned_cols=113 Identities=11% Similarity=0.095 Sum_probs=87.8
Q ss_pred HHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 7 CFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINK--HDCWSQHALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 7 al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P--~dawA~halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
++..+++.+...+..+..+.++|-++...|++++|.+...+++..+| ++..+....+.++...||++.|...+++...
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 44566777766556677778999999999999999999999999997 8999999999999999999999999988766
Q ss_pred hhc-----cCCcchhHHHHHHHHHH--HH-hCCCCHHHHHHHHHhhchh
Q 026637 85 TWS-----SCSSFMYTHNWWHVALC--YL-EGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 85 ~w~-----~~~~~l~~H~~WHlAL~--~l-e~G~~~deAl~~yd~~i~~ 125 (235)
..| ++. . -. .++-. .+ ..|+++.+|..+|++....
T Consensus 165 ~~~d~~~~~d~-~---l~--~Laea~v~l~~g~~~~q~A~~~f~El~~~ 207 (310)
T 3mv2_B 165 AIEDTVSGDNE-M---IL--NLAESYIKFATNKETATSNFYYYEELSQT 207 (310)
T ss_dssp HSCHHHHHHHH-H---HH--HHHHHHHHHHHTCSTTTHHHHHHHHHHTT
T ss_pred cCccccccchH-H---HH--HHHHHHHHHHhCCccHHHHHHHHHHHHHh
Confidence 654 332 1 11 13322 22 2334899999999995443
No 216
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.15 E-value=0.0011 Score=53.63 Aligned_cols=84 Identities=8% Similarity=-0.126 Sum_probs=76.1
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhC---CHHHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELG---QMSDAEEAAKKGLKIN-K-HDCWSQHALCHVLQHDCCFKEAVQFM 79 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g---~~~~Ae~~arrAL~L~-P-~dawA~halahvl~~~Gr~~egi~~l 79 (235)
..+++...+.++..|.+......+|++|...+ ++++++.+.+..+..+ | +....+..+|-.++..|++++|+.++
T Consensus 15 ~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 15 LKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 45667777777778889999999999999988 7789999999999999 8 66899999999999999999999999
Q ss_pred HHchhhhcc
Q 026637 80 EECSSTWSS 88 (235)
Q Consensus 80 ~~a~~~w~~ 88 (235)
+...+..|.
T Consensus 95 ~~lL~ieP~ 103 (152)
T 1pc2_A 95 RGLLQTEPQ 103 (152)
T ss_dssp HHHHHHCTT
T ss_pred HHHHhcCCC
Confidence 999999977
No 217
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.10 E-value=0.0044 Score=60.77 Aligned_cols=189 Identities=8% Similarity=0.051 Sum_probs=121.3
Q ss_pred CChhhHH-HHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh-----------CCC-----------CHHH
Q 026637 2 GRPDLCF-DIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI-----------NKH-----------DCWS 58 (235)
Q Consensus 2 G~~~~al-~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L-----------~P~-----------dawA 58 (235)
|+.++++ ...+|++...|.+..++-.++-..+..|++++|.+++++++.. +|. .+..
T Consensus 357 ~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~v 436 (679)
T 4e6h_A 357 NTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYV 436 (679)
T ss_dssp SCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHH
Confidence 5667786 9999999999999988888999999999999999999999985 253 2335
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhH
Q 026637 59 QHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVY 138 (235)
Q Consensus 59 ~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~ 138 (235)
+-..+......|..+.+...+.++...-|.+. .++|...|......|++++.|.++|++.+... .+. ..-+
T Consensus 437 Wi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~----~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~--p~~---~~~w 507 (679)
T 4e6h_A 437 YCVYMNTMKRIQGLAASRKIFGKCRRLKKLVT----PDIYLENAYIEYHISKDTKTACKVLELGLKYF--ATD---GEYI 507 (679)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSC----THHHHHHHHHHHTTTSCCHHHHHHHHHHHHHH--TTC---HHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCC----hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHC--CCc---hHHH
Confidence 55666777778999999999999977633322 35665566665555546899999999999873 221 2112
Q ss_pred hHHHHHHHHHHhcCcccccccchHHHHHHHHhhhc---chhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHh
Q 026637 139 LNALGLLLRVYVRGELDVFGNRLKVLADCVADQAN---WYLECHLDLLILWALANTGEVSKAEDLLKGLKSRH 208 (235)
Q Consensus 139 ~da~sLL~Rl~l~G~~~~~g~rw~~la~~~~~~~~---~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~ 208 (235)
+--+-+++.+ |- -++=..+.+....... .....|.-..-. =...|..+.++.+.+.+...-
T Consensus 508 ~~y~~fe~~~---~~----~~~AR~lferal~~~~~~~~~~~lw~~~~~f--E~~~G~~~~~~~v~~R~~~~~ 571 (679)
T 4e6h_A 508 NKYLDFLIYV---NE----ESQVKSLFESSIDKISDSHLLKMIFQKVIFF--ESKVGSLNSVRTLEKRFFEKF 571 (679)
T ss_dssp HHHHHHHHHH---TC----HHHHHHHHHHHTTTSSSTTHHHHHHHHHHHH--HHHTCCSHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhC---CC----HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH--HHHcCCHHHHHHHHHHHHHhC
Confidence 2223333332 21 2344455555444332 122122211111 124577777777777766554
No 218
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.46 E-value=0.18 Score=47.27 Aligned_cols=164 Identities=10% Similarity=-0.021 Sum_probs=100.7
Q ss_pred HHHHhCCHHHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHcCC---------HHHHHHHHHHchhhhccCCcchhHHHHH
Q 026637 31 SLLELGQMSDAEEAAKKGLKI--NKHDCWSQHALCHVLQHDCC---------FKEAVQFMEECSSTWSSCSSFMYTHNWW 99 (235)
Q Consensus 31 ~L~e~g~~~~Ae~~arrAL~L--~P~dawA~halahvl~~~Gr---------~~egi~~l~~a~~~w~~~~~~l~~H~~W 99 (235)
++...|++++|.+++++..+. .| |...+.++-+++...|+ .++|...+++-...--. |+. .+.+.
T Consensus 35 ~c~k~G~~~~A~~lf~~M~~~Gv~p-d~~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~-Pd~-~tyn~- 110 (501)
T 4g26_A 35 MCSKKGDVLEALRLYDEARRNGVQL-SQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVV-PNE-ATFTN- 110 (501)
T ss_dssp HTTTSCCHHHHHHHHHHHHHHTCCC-CHHHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCC-CCH-HHHHH-
T ss_pred HHHhCCCHHHHHHHHHHHHHcCCCC-CHhHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCC-CCH-HHHHH-
Confidence 556789999999999988764 44 56678888887765544 68899998877654333 322 22232
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCcccccccchHHHHHHHHhhhcchhc--
Q 026637 100 HVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNRLKVLADCVADQANWYLE-- 177 (235)
Q Consensus 100 HlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~~g~rw~~la~~~~~~~~~~~~-- 177 (235)
+--.+...| +.++|+++|++...... +.+...+..++++.+ -.| +++.....+..-...++.
T Consensus 111 -lI~~~~~~g-~~~~A~~l~~~M~~~g~-~Pd~~tyn~lI~~~~------~~g-------~~~~A~~l~~~M~~~G~~Pd 174 (501)
T 4g26_A 111 -GARLAVAKD-DPEMAFDMVKQMKAFGI-QPRLRSYGPALFGFC------RKG-------DADKAYEVDAHMVESEVVPE 174 (501)
T ss_dssp -HHHHHHHHT-CHHHHHHHHHHHHHTTC-CCCHHHHHHHHHHHH------HTT-------CHHHHHHHHHHHHHTTCCCC
T ss_pred -HHHHHHhcC-CHHHHHHHHHHHHHcCC-CCccceehHHHHHHH------HCC-------CHHHHHHHHHHHHhcCCCCC
Confidence 444555667 89999999998877654 222223333444332 122 122222222221111111
Q ss_pred --chhhHHHHHHHhcCCCchHHHHHHHHHHHHhhcCchHHH
Q 026637 178 --CHLDLLILWALANTGEVSKAEDLLKGLKSRHSKMIKKKQ 216 (235)
Q Consensus 178 --~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~~~~~~~~~ 216 (235)
.|+-+ +=+++++|+.+.+.++++.|+......+..+-
T Consensus 175 ~~ty~~L--i~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~ 213 (501)
T 4g26_A 175 EPELAAL--LKVSMDTKNADKVYKTLQRLRDLVRQVSKSTF 213 (501)
T ss_dssp HHHHHHH--HHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHH
T ss_pred HHHHHHH--HHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHH
Confidence 13322 55788999999999999999988766444433
No 219
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.32 E-value=0.019 Score=44.94 Aligned_cols=85 Identities=11% Similarity=0.020 Sum_probs=70.3
Q ss_pred CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHchhhh-ccCCcchhHHHHHHHHHHHHhCCCCH
Q 026637 37 QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKE---AVQFMEECSSTW-SSCSSFMYTHNWWHVALCYLEGHSPM 112 (235)
Q Consensus 37 ~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~e---gi~~l~~a~~~w-~~~~~~l~~H~~WHlAL~~le~G~~~ 112 (235)
.+..+++.+.++++.++.+..+.+.+|+++.......+ ||..++.-.+.. |.. .--..-++|+.++..| +|
T Consensus 16 ~l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~----~Rd~lY~LAvg~yklg-~Y 90 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEE----QRDYVFYLAVGNYRLK-EY 90 (126)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHH----HHHHHHHHHHHHHHTT-CH
T ss_pred HHHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcch----HHHHHHHHHHHHHHhh-hH
Confidence 45668888899999999999999999999999999988 999999987764 211 1122335999999998 99
Q ss_pred HHHHHHHHhhchhh
Q 026637 113 RKVLEIYDNHIWKE 126 (235)
Q Consensus 113 deAl~~yd~~i~~~ 126 (235)
++|++.++..+..+
T Consensus 91 ~~A~~~~~~lL~~e 104 (126)
T 1nzn_A 91 EKALKYVRGLLQTE 104 (126)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999999873
No 220
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.23 E-value=0.0081 Score=56.34 Aligned_cols=77 Identities=12% Similarity=0.152 Sum_probs=51.8
Q ss_pred CCChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
+|+.++|.+.++++ +++..+....+++.+.|++++|...+.. |..+|++.. .+...++..|+++|++..++
T Consensus 161 Lg~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~-L~~~ad~l~---~lv~~Yek~G~~eEai~lLe 231 (449)
T 1b89_A 161 LGEYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLH-IVVHADELE---ELINYYQDRGYFEELITMLE 231 (449)
T ss_dssp TTCHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTT-TTTCHHHHH---HHHHHHHHTTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHH-HHhCHhhHH---HHHHHHHHCCCHHHHHHHHH
Confidence 46666777777766 3556666666777777777777666553 445555533 46677888888888888888
Q ss_pred Hchhhh
Q 026637 81 ECSSTW 86 (235)
Q Consensus 81 ~a~~~w 86 (235)
+.....
T Consensus 232 ~aL~le 237 (449)
T 1b89_A 232 AALGLE 237 (449)
T ss_dssp HHTTST
T ss_pred HHhCCc
Confidence 876554
No 221
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.20 E-value=0.027 Score=46.05 Aligned_cols=93 Identities=15% Similarity=0.065 Sum_probs=71.2
Q ss_pred HHHHHHhCCHHHHHHHHHHHHhhCCCCHH---------HHHHHHHHHHHcCCHHHHHHHHHHchhhhcc---CC------
Q 026637 29 AFSLLELGQMSDAEEAAKKGLKINKHDCW---------SQHALCHVLQHDCCFKEAVQFMEECSSTWSS---CS------ 90 (235)
Q Consensus 29 Af~L~e~g~~~~Ae~~arrAL~L~P~daw---------A~halahvl~~~Gr~~egi~~l~~a~~~w~~---~~------ 90 (235)
.-.+.+.|.|+-|+-++..++++..+++. ++..+|.+++.+|++..|...++++...-.. .+
T Consensus 27 ik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~ 106 (167)
T 3ffl_A 27 VRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPST 106 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC----------
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence 33577899999999999999988877776 7899999999999999999999996332211 01
Q ss_pred -----------cchhHHHHHHHHHHHHhCCCCHHHHHHHHHhh
Q 026637 91 -----------SFMYTHNWWHVALCYLEGHSPMRKVLEIYDNH 122 (235)
Q Consensus 91 -----------~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~ 122 (235)
.+-...+-..+|.||++.| ++++|+.+.+.-
T Consensus 107 ~~~ss~p~s~~~~~e~Elkykia~C~~~l~-~~~~Ai~~Le~I 148 (167)
T 3ffl_A 107 GNSASTPQSQCLPSEIEVKYKLAECYTVLK-QDKDAIAILDGI 148 (167)
T ss_dssp ----------CCCCHHHHHHHHHHHHHHTT-CHHHHHHHHHTS
T ss_pred cccCCCcccccccchHHHHHHHHHHHHHHC-CHHHHHHHHhcC
Confidence 0111233345999999998 999999999553
No 222
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.95 E-value=0.062 Score=50.11 Aligned_cols=114 Identities=11% Similarity=0.089 Sum_probs=83.0
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-------------------
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHV------------------- 65 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahv------------------- 65 (235)
.......++++...|.++.+.-+++--+...|+.++|..+.+||+.. |++..-....+..
T Consensus 196 ~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~ 274 (493)
T 2uy1_A 196 SRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEA 274 (493)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhcc
Confidence 34567888999888999998988988889999999999999999999 9996544333221
Q ss_pred ---------------------HHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhch
Q 026637 66 ---------------------LQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIW 124 (235)
Q Consensus 66 ---------------------l~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~ 124 (235)
....|..+.+...++++ ..|.+ ..|.|.-.|.+-+..|++.+.|..+|+..+.
T Consensus 275 ~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A--~~~~~----~~~v~i~~A~lE~~~~~d~~~ar~ife~al~ 348 (493)
T 2uy1_A 275 ESAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL--GNEGV----GPHVFIYCAFIEYYATGSRATPYNIFSSGLL 348 (493)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH--TTSCC----CHHHHHHHHHHHHHHHCCSHHHHHHHHHHHH
T ss_pred chhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh--hCCCC----ChHHHHHHHHHHHHHCCChHHHHHHHHHHHH
Confidence 11255677777777777 22321 2467655666555444368999999999887
Q ss_pred h
Q 026637 125 K 125 (235)
Q Consensus 125 ~ 125 (235)
.
T Consensus 349 ~ 349 (493)
T 2uy1_A 349 K 349 (493)
T ss_dssp H
T ss_pred H
Confidence 6
No 223
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=95.45 E-value=0.12 Score=46.82 Aligned_cols=83 Identities=11% Similarity=-0.073 Sum_probs=53.8
Q ss_pred CChhhHHHHHHhhcCCCCCCh--------hH--------------HHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQED--------FI--------------FGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQ 59 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~--------~~--------------~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~ 59 (235)
|+.+.+.+..++|+..|.+.. ++ .-.++-.+.+.|++++|....+++++.+|-+-.++
T Consensus 129 ~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~ 208 (388)
T 2ff4_A 129 GRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPLW 208 (388)
T ss_dssp TCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHH
Confidence 677788889999999875322 11 11222334456677777777777777777776666
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 60 HALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 60 halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
-.+-.+++..||..+|++.+++..+
T Consensus 209 ~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 209 TQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 6666677777777777766666544
No 224
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=95.15 E-value=0.15 Score=47.41 Aligned_cols=113 Identities=4% Similarity=-0.092 Sum_probs=79.1
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHH----------------------------------------HHHhCCHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFS----------------------------------------LLELGQMSDA 41 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~----------------------------------------L~e~g~~~~A 41 (235)
|+.+.++...+|++.. |.+..+...++-. +...+..++|
T Consensus 227 ~~~~~ar~i~erAi~~-P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~~y~~~~~r~~~~~~A 305 (493)
T 2uy1_A 227 GQKEKAKKVVERGIEM-SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRINHLNYVLKKRGLELF 305 (493)
T ss_dssp TCHHHHHHHHHHHHHH-CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred CCHHHHHHHHHHHHhC-CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHHHHHHHHHHcCCHHHH
Confidence 6788888888888888 8765443333221 1135678999
Q ss_pred HHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 026637 42 EEAAKKGLKINKHDCWSQHALCHVLQHDC-CFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYD 120 (235)
Q Consensus 42 e~~arrAL~L~P~dawA~halahvl~~~G-r~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd 120 (235)
.++..+| ...+.....+-..|..-...| +.+.|...++......|+.| .+||-.+-+....| +.+.|..+|+
T Consensus 306 R~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~-----~~~~~yid~e~~~~-~~~~aR~l~e 378 (493)
T 2uy1_A 306 RKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDST-----LLKEEFFLFLLRIG-DEENARALFK 378 (493)
T ss_dssp HHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCH-----HHHHHHHHHHHHHT-CHHHHHHHHH
T ss_pred HHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCH-----HHHHHHHHHHHHcC-CHHHHHHHHH
Confidence 9999999 433334444444454444455 59999999999998887643 35667777778887 8999999998
Q ss_pred hh
Q 026637 121 NH 122 (235)
Q Consensus 121 ~~ 122 (235)
+.
T Consensus 379 r~ 380 (493)
T 2uy1_A 379 RL 380 (493)
T ss_dssp HS
T ss_pred HH
Confidence 85
No 225
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.84 E-value=0.46 Score=44.37 Aligned_cols=116 Identities=10% Similarity=-0.099 Sum_probs=84.1
Q ss_pred hhHHHHHHhhcCC-CCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 5 DLCFDIIHQVLPY-NQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKI--NKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 5 ~~al~~~~ral~~-~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L--~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
+.+++..++.... .+.+...++.+--++...|++++|+++.++-.+. .| |...+.++-..+...|+.++|...+++
T Consensus 87 ~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~P-d~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 87 SRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQP-RLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCC-ccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 4455555544332 2346677778878899999999999999987764 45 577899999999999999999999998
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
-...--. |+. .+.+. +=-.+...| +.|+|.+++++.-...
T Consensus 166 M~~~G~~-Pd~-~ty~~--Li~~~~~~g-~~d~A~~ll~~Mr~~g 205 (501)
T 4g26_A 166 MVESEVV-PEE-PELAA--LLKVSMDTK-NADKVYKTLQRLRDLV 205 (501)
T ss_dssp HHHTTCC-CCH-HHHHH--HHHHHHHTT-CHHHHHHHHHHHHHHT
T ss_pred HHhcCCC-CCH-HHHHH--HHHHHhhCC-CHHHHHHHHHHHHHhC
Confidence 8665433 332 22222 444555677 9999999998876654
No 226
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=93.56 E-value=0.2 Score=40.89 Aligned_cols=67 Identities=13% Similarity=0.027 Sum_probs=53.8
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCC-------------------------CHHHHHHHHHHHHHcCCHHHHHH
Q 026637 23 FIFGILAFSLLELGQMSDAEEAAKKGLKINKH-------------------------DCWSQHALCHVLQHDCCFKEAVQ 77 (235)
Q Consensus 23 ~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~-------------------------dawA~halahvl~~~Gr~~egi~ 77 (235)
.++.++|-++-.+|+|.+|+..+++||.+... +...-.-++.++...|++++|+.
T Consensus 64 ~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~ 143 (167)
T 3ffl_A 64 QLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIA 143 (167)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHH
Confidence 38899999999999999999999999775431 12466889999999999999999
Q ss_pred HHHHchhhhccCC
Q 026637 78 FMEECSSTWSSCS 90 (235)
Q Consensus 78 ~l~~a~~~w~~~~ 90 (235)
.|+. ++.+.+.|
T Consensus 144 ~Le~-Ip~k~Rt~ 155 (167)
T 3ffl_A 144 ILDG-IPSRQRTP 155 (167)
T ss_dssp HHHT-SCGGGCCH
T ss_pred HHhc-CCchhcCH
Confidence 9985 34444433
No 227
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=92.14 E-value=0.83 Score=36.93 Aligned_cols=98 Identities=12% Similarity=0.003 Sum_probs=78.4
Q ss_pred hhHHHHHHhhcCCCC--------CChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026637 5 DLCFDIIHQVLPYNQ--------QEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAV 76 (235)
Q Consensus 5 ~~al~~~~ral~~~p--------~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi 76 (235)
++.++..+||+..-| .|.|.+--+|. +++.++.++|...++.++.++.+.+-.+-.-|+--..+|+.+.|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~-~~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE-LKAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH-HHHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 778888888887544 35566666664 478899999999999999999999888888888889999999999
Q ss_pred HHHHHchhhhccCCcchhHHHHHHHHHHHHhCC
Q 026637 77 QFMEECSSTWSSCSSFMYTHNWWHVALCYLEGH 109 (235)
Q Consensus 77 ~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G 109 (235)
..+.+++..-|. |. .. .-.|+.-|..|
T Consensus 115 kILg~AiG~~~k-~~----~~-le~a~~nl~~~ 141 (161)
T 4h7y_A 115 QLLQKAVERGAV-PL----EM-LEIALRNLNLQ 141 (161)
T ss_dssp HHHHHHHHTTCB-CH----HH-HHHHHHHHHTT
T ss_pred HHHHHHhccCCC-cH----HH-HHHHHHhhhcC
Confidence 999999998776 31 22 13677777765
No 228
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=89.82 E-value=0.94 Score=35.11 Aligned_cols=83 Identities=10% Similarity=-0.117 Sum_probs=65.1
Q ss_pred hHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHH---HHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026637 6 LCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSD---AEEAAKKGLKIN-K-HDCWSQHALCHVLQHDCCFKEAVQFME 80 (235)
Q Consensus 6 ~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~---Ae~~arrAL~L~-P-~dawA~halahvl~~~Gr~~egi~~l~ 80 (235)
.+++...+.++..+........+|++|.....-.. ++.+.+.-+.-+ | +.-..+.-+|-.++..|++++|+.+++
T Consensus 19 ~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~ 98 (126)
T 1nzn_A 19 KFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVR 98 (126)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 44555566666566777888888888888775555 888888888776 5 566788888889999999999999999
Q ss_pred Hchhhhcc
Q 026637 81 ECSSTWSS 88 (235)
Q Consensus 81 ~a~~~w~~ 88 (235)
...+..|.
T Consensus 99 ~lL~~eP~ 106 (126)
T 1nzn_A 99 GLLQTEPQ 106 (126)
T ss_dssp HHHHHCTT
T ss_pred HHHHhCCC
Confidence 88888876
No 229
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=88.90 E-value=4.9 Score=36.04 Aligned_cols=85 Identities=11% Similarity=0.044 Sum_probs=65.5
Q ss_pred HhCCHHHHHHHHHHHHhhCC--------CCHHHH--------------HHHHHHHHHcCCHHHHHHHHHHchhhhccCCc
Q 026637 34 ELGQMSDAEEAAKKGLKINK--------HDCWSQ--------------HALCHVLQHDCCFKEAVQFMEECSSTWSSCSS 91 (235)
Q Consensus 34 e~g~~~~Ae~~arrAL~L~P--------~dawA~--------------halahvl~~~Gr~~egi~~l~~a~~~w~~~~~ 91 (235)
..|+.++|.+..++||++=. ...|+. ..++..+...|++++++..+++.....|-.
T Consensus 127 ~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~-- 204 (388)
T 2ff4_A 127 AAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYR-- 204 (388)
T ss_dssp HTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC--
T ss_pred hCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC--
Confidence 46889999999999999853 334543 346677889999999999999998887663
Q ss_pred chhHHHHHHHHHHHHhCCCCHHHHHHHHHhhch
Q 026637 92 FMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIW 124 (235)
Q Consensus 92 ~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~ 124 (235)
-..+-.+-.++...| +..+|++.|++.-.
T Consensus 205 ---E~~~~~lm~al~~~G-r~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 205 ---EPLWTQLITAYYLSD-RQSDALGAYRRVKT 233 (388)
T ss_dssp ---HHHHHHHHHHHHTTT-CHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHcC-CHHHHHHHHHHHHH
Confidence 345556777778888 99999999976543
No 230
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=88.73 E-value=2.1 Score=33.57 Aligned_cols=66 Identities=8% Similarity=-0.049 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHHcCCHH---HHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 55 DCWSQHALCHVLQHDCCFK---EAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 55 dawA~halahvl~~~Gr~~---egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
++.+.++.|+++......+ +||..+++-.+..|.. ..-....+|+.++..| +|++|++..+..+..
T Consensus 39 s~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~----~Rd~LYyLAvg~yklg-dY~~Ar~y~d~lL~~ 107 (134)
T 3o48_A 39 TIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR----RRECLYYLTIGCYKLG-EYSMAKRYVDTLFEH 107 (134)
T ss_dssp CHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGG----HHHHHHHHHHHHHHHT-CHHHHHHHHHHHHTT
T ss_pred ChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcch----hHHHHHHHHHHHHHhh-hHHHHHHHHHHHHhh
Confidence 6789999999999888764 6999999887765431 2345567999999998 999999999998876
No 231
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=88.13 E-value=0.73 Score=36.23 Aligned_cols=67 Identities=7% Similarity=-0.164 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHHhCCH---HHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc
Q 026637 22 DFIFGILAFSLLELGQM---SDAEEAAKKGLKINK-HDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 22 ~~~~g~~Af~L~e~g~~---~~Ae~~arrAL~L~P-~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~ 88 (235)
+.....+|++|.....- .+++.+.+..+.-+| +.-.-+.-+|-.++..|++++|..+.+...+..|.
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~ 110 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 110 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTT
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCC
Confidence 34555555555555422 235555555555555 22444555555555566666666666555555554
No 232
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=87.53 E-value=1.9 Score=42.80 Aligned_cols=59 Identities=14% Similarity=0.075 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc
Q 026637 24 IFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEC 82 (235)
Q Consensus 24 ~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a 82 (235)
.+..-+--|...|+|+-|.++|++|+.+.|.+--.+..|+.||...|+++.|+-.+..+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 34444444556899999999999999999999999999999999999999999998877
No 233
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=87.51 E-value=0.78 Score=36.50 Aligned_cols=70 Identities=7% Similarity=-0.158 Sum_probs=47.9
Q ss_pred CCChhHHHHHHHHHHHhCCH---HHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc
Q 026637 19 QQEDFIFGILAFSLLELGQM---SDAEEAAKKGLKINK-HDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSS 88 (235)
Q Consensus 19 p~~~~~~g~~Af~L~e~g~~---~~Ae~~arrAL~L~P-~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~ 88 (235)
.-.+.....+|++|.....- .+++.+.+.-+.-.| +.-.-+.-+|-.++..|++++|..+.+...+..|.
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~ 109 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 109 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCC
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 34556667777777776633 357777777777666 34566777777777777777777777777777766
No 234
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=86.79 E-value=5.7 Score=32.04 Aligned_cols=99 Identities=11% Similarity=0.040 Sum_probs=76.4
Q ss_pred CCCChhHHHHHHHHHHHhCCH------HHHHHHHHHHHhhCCCCH----------HHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 18 NQQEDFIFGILAFSLLELGQM------SDAEEAAKKGLKINKHDC----------WSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 18 ~p~~~~~~g~~Af~L~e~g~~------~~Ae~~arrAL~L~P~da----------wA~halahvl~~~Gr~~egi~~l~~ 81 (235)
.|.++.....+.--++..|+. ++=.+.++||++--|-+- |.-.++ +...++.+++...+..
T Consensus 9 ~p~~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~---~~ei~D~d~aR~vy~~ 85 (161)
T 4h7y_A 9 MANNPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIEALPPDKYGQNESFARIQVRFAE---LKAIQEPDDARDYFQM 85 (161)
T ss_dssp -CCSHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHH---HHHHHCGGGCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHHcCCccccccHHHHHHHHHHHHH---HHHhcCHHHHHHHHHH
Confidence 455665666666668888988 888999999999888642 333332 2455899999999999
Q ss_pred chhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
+... +..| ..+|-..|-|.+..| +.++|..++-++|.-
T Consensus 86 a~~~---hKkF--AKiwi~~AqFEiRqg-nl~kARkILg~AiG~ 123 (161)
T 4h7y_A 86 ARAN---CKKF--AFVHISFAQFELSQG-NVKKSKQLLQKAVER 123 (161)
T ss_dssp HHHH---CTTB--HHHHHHHHHHHHHTT-CHHHHHHHHHHHHHT
T ss_pred HHHH---hHHH--HHHHHHHHHHHHHcc-cHHHHHHHHHHHhcc
Confidence 9887 3557 677777899999998 899999999999986
No 235
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=85.43 E-value=10 Score=29.89 Aligned_cols=69 Identities=9% Similarity=-0.088 Sum_probs=55.9
Q ss_pred CCCHHHHHHHHHHHHHcCCHH---HHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhh
Q 026637 53 KHDCWSQHALCHVLQHDCCFK---EAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKE 126 (235)
Q Consensus 53 P~dawA~halahvl~~~Gr~~---egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~ 126 (235)
+-++.+.++.|+++......+ +||..++.-.+..|.. ---+.+ .+|+.++..| +|++|++..+..+..+
T Consensus 36 ~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~--~RdcLY--yLAvg~ykl~-~Y~~Ar~y~d~lL~~e 107 (144)
T 1y8m_A 36 TATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESR--RRECLY--YLTIGCYKLG-EYSMAKRYVDTLFEHE 107 (144)
T ss_dssp TSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCST--HHHHHH--HHHHHHHTTT-CHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccc--hhHHHH--HHHHHHHHhh-hHHHHHHHHHHHHhcC
Confidence 678899999999999988766 6999999988865532 112233 5999999998 9999999999988873
No 236
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=84.60 E-value=28 Score=35.54 Aligned_cols=190 Identities=11% Similarity=0.029 Sum_probs=113.0
Q ss_pred hcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHh-hCCC--------------------C--HHHHHHHHHHHHHcC
Q 026637 14 VLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLK-INKH--------------------D--CWSQHALCHVLQHDC 70 (235)
Q Consensus 14 al~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~-L~P~--------------------d--awA~halahvl~~~G 70 (235)
.++..|.++..-.++|-++..+|++++|...+++|-. +.++ + +.=+.-+.-.++..|
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~ 913 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES 913 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTS
T ss_pred HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcC
Confidence 3455677787888999999999999999999998832 1111 1 112334566888999
Q ss_pred CHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHH----HhhchhhhcCCCCCchHhHh--HHHHH
Q 026637 71 CFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIY----DNHIWKELEKPDAVHPEVYL--NALGL 144 (235)
Q Consensus 71 r~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~y----d~~i~~~~~~~~~~~~~~~~--da~sL 144 (235)
.++.++.|...++..-+..+.-+....|--+=.++++.| +||+|-... |..+...+-+ .....++ +....
T Consensus 914 ~~~~vi~fa~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~-~ye~Ay~aL~~~pd~~~r~~cLr---~LV~~lce~~~~~~ 989 (1139)
T 4fhn_B 914 AYIDALEFSLLADASKETDDEDLSIAITHETLKTACAAG-KFDAAHVALMVLSTTPLKKSCLL---DFVNQLTKQGKINQ 989 (1139)
T ss_dssp CCHHHHHHHHHHHHHCCSCCHHHHHHHHHHHHHHHHHHC-CSGGGGHHHHHHHHSSSCHHHHH---HHHHHHHHHCCHHH
T ss_pred CHHHHHHHHHHHHHhccCCChhhHHHHHHHHHHHHHhhC-CHHHHHHHHHhCCCHHHHHHHHH---HHHHHHHhCCChhh
Confidence 999999999888765443332222223322344567777 899886555 2222222100 0111122 34556
Q ss_pred HHHHHhcCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHHHhh
Q 026637 145 LLRVYVRGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKSRHS 209 (235)
Q Consensus 145 L~Rl~l~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~~~~ 209 (235)
|.++-+.|.-..|.+-....+..... ..+...+-++-|.+=..+.....++.-|-+.+.+...
T Consensus 990 L~~lpf~gl~~~Vd~IL~~kAr~~~~--~~~~p~Yy~iLYs~ri~r~dyR~AA~vmYe~~~RL~~ 1052 (1139)
T 4fhn_B 990 LLNYSMPTLRQDVDNLLERKAFQMIN--VESQPCWYNILFSWRYKHQNYRDAAAIIYEKLSRYIS 1052 (1139)
T ss_dssp HHHHTTTSCHHHHHHHHHHHHHHHHH--HCCSTHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred hhCCCCccHHHHHHHHHHHHHHhCCc--cccCCCHHHHhHhhhhccCChHHHHHHHHHHHHHhhh
Confidence 66666666532233322222222111 0111124588888888899999999999888887754
No 237
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=82.63 E-value=5.7 Score=37.47 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=29.1
Q ss_pred HHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc
Q 026637 33 LELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEC 82 (235)
Q Consensus 33 ~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a 82 (235)
.+.|++++|.+.++ ..+++..+-.+|.....+|+++.|+..+.+.
T Consensus 663 l~~~~~~~A~~~~~-----~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 663 LKVGQLTLARDLLT-----DESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHTCHHHHHHHHT-----TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHH-----hhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 45677777776643 2355556666777777777777777666654
No 238
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=77.39 E-value=22 Score=35.23 Aligned_cols=112 Identities=13% Similarity=0.199 Sum_probs=73.3
Q ss_pred hhHHHHHHhhcCCCCCChhHHHHHHHHHHHhC--CHHHHHHHHHHHHh--------hCCCCH----------HHHHHHHH
Q 026637 5 DLCFDIIHQVLPYNQQEDFIFGILAFSLLELG--QMSDAEEAAKKGLK--------INKHDC----------WSQHALCH 64 (235)
Q Consensus 5 ~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g--~~~~Ae~~arrAL~--------L~P~da----------wA~halah 64 (235)
+.++..+++....+|.....+...-....+.. +=-+|..+.-++++ ++|.+. .-++.-+-
T Consensus 266 ~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Qa~ 345 (754)
T 4gns_B 266 DFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQTN 345 (754)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHHHH
Confidence 45667777766667755433332222222221 22346666666663 455554 34555566
Q ss_pred HHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhh
Q 026637 65 VLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNH 122 (235)
Q Consensus 65 vl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~ 122 (235)
-+..+|+++-|+....++...-|.. | . -|-.||.+|+.+| +||.||-.....
T Consensus 346 FLl~K~~~elAL~~Ak~AV~~aPse--F-~--tW~~La~vYi~l~-d~e~ALLtLNSc 397 (754)
T 4gns_B 346 FLLNRGDYELALGVSNTSTELALDS--F-E--SWYNLARCHIKKE-EYEKALFAINSM 397 (754)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSC--H-H--HHHHHHHHHHHTT-CHHHHHHHHHHS
T ss_pred HHhccCcHHHHHHHHHHHHhcCchh--h-H--HHHHHHHHHHHhc-cHHHHHHHHhcC
Confidence 6777899999999999998888663 3 3 4556999999998 999999777443
No 239
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=75.73 E-value=13 Score=32.48 Aligned_cols=118 Identities=8% Similarity=-0.011 Sum_probs=68.5
Q ss_pred CChhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026637 2 GRPDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEE 81 (235)
Q Consensus 2 G~~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~ 81 (235)
|+.++++..++..+...|.|.-.-..+--.|+-+|++++|.+-.+-+.+++|...-.....-+... +.....--|--+
T Consensus 11 g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~--aE~~R~~vfaG~ 88 (273)
T 1zbp_A 11 GQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVK--AAQARKDFAQGA 88 (273)
T ss_dssp TCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHH--HHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHH--HHHHHHHHHcCC
Confidence 566777777787788888877776666667777888888888888888888877654443322210 000000001011
Q ss_pred chhhhccCCcchhHH-HHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 82 CSSTWSSCSSFMYTH-NWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 82 a~~~w~~~~~~l~~H-~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
..|.....|. .+ -.-+-|+..+..| +.++|.++-+++...
T Consensus 89 ~~P~~~g~~~---~w~~~ll~Al~~~~~G-~~~~A~~lr~~A~e~ 129 (273)
T 1zbp_A 89 ATAKVLGENE---ELTKSLVSFNLSMVSQ-DYEQVSELALQIEEL 129 (273)
T ss_dssp CCEECCCSCH---HHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCH---HHHHHHHHHHHHhhcC-CHHHHHHHHHHHHhc
Confidence 1222222211 11 1113556666667 899999998888555
No 240
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=75.43 E-value=8.5 Score=36.13 Aligned_cols=57 Identities=11% Similarity=-0.014 Sum_probs=45.0
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 28 LAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 28 ~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
+|-.--....++.|+..+++|+.++|+++..+|-+|.+...+|+.-+++-++.++.-
T Consensus 158 LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~ 214 (497)
T 1ya0_A 158 LGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIA 214 (497)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHh
Confidence 344444455667788999999999999999999999999999998888888776643
No 241
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=74.06 E-value=7.2 Score=34.02 Aligned_cols=125 Identities=13% Similarity=0.058 Sum_probs=85.6
Q ss_pred HHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCC
Q 026637 31 SLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHS 110 (235)
Q Consensus 31 ~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~ 110 (235)
.+...|.+++|.+.....+.-+|.|+..-..+-..+...|+.+.|..-++.+....|..
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~--------------------- 64 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEY--------------------- 64 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGG---------------------
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchh---------------------
Confidence 35578899999999999999999999999999999999999999999888777776552
Q ss_pred CHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHh-cCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHh
Q 026637 111 PMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYV-RGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALA 189 (235)
Q Consensus 111 ~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l-~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~ 189 (235)
......|...|..+ .+|-++ .|...|. ....+..+...++-+....
T Consensus 65 --~~~a~~yr~lI~aE------------------~~R~~vfaG~~~P~-------------~~g~~~~w~~~ll~Al~~~ 111 (273)
T 1zbp_A 65 --LPGASQLRHLVKAA------------------QARKDFAQGAATAK-------------VLGENEELTKSLVSFNLSM 111 (273)
T ss_dssp --HHHHHHHHHHHHHH------------------HHHHHHTTSCCCEE-------------CCCSCHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHH------------------HHHHHHHcCCCCCC-------------CCCCCHHHHHHHHHHHHHh
Confidence 22233344444332 133333 3443210 1112222445666677777
Q ss_pred cCCCchHHHHHHHHHHHHhh
Q 026637 190 NTGEVSKAEDLLKGLKSRHS 209 (235)
Q Consensus 190 ~ag~~~~~~~ll~~~~~~~~ 209 (235)
..|+.+.++++.+.....+.
T Consensus 112 ~~G~~~~A~~lr~~A~e~ap 131 (273)
T 1zbp_A 112 VSQDYEQVSELALQIEELRQ 131 (273)
T ss_dssp HHTCHHHHHHHHHHHHHHCC
T ss_pred hcCCHHHHHHHHHHHHhcCc
Confidence 88888888888887766653
No 242
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=71.21 E-value=47 Score=34.42 Aligned_cols=101 Identities=9% Similarity=-0.120 Sum_probs=72.4
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHH
Q 026637 23 FIFGILAFSLLELGQMSDAEEAAKKGLKI----NKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNW 98 (235)
Q Consensus 23 ~~~g~~Af~L~e~g~~~~Ae~~arrAL~L----~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~ 98 (235)
..++.+=-++...|++++|.++.++--.. -.-|...+.+|-+.+...|+.++|+..+++-...--. |+. .+.|.
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~-PDv-vTYnt 205 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLT-PDL-LSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCC-CCH-HHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCC-CcH-HHHHH
Confidence 34666666899999999999998654322 2346779999999999999999999999998665433 333 23333
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHhhchhhh
Q 026637 99 WHVALCYLEGHSPMRKVLEIYDNHIWKEL 127 (235)
Q Consensus 99 WHlAL~~le~G~~~deAl~~yd~~i~~~~ 127 (235)
-=-+++. .|...++|.++++.....++
T Consensus 206 LI~glcK--~G~~~e~A~~Ll~EM~~kG~ 232 (1134)
T 3spa_A 206 ALQCMGR--QDQDAGTIERCLEQMSQEGL 232 (1134)
T ss_dssp HHHHHHH--HTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHh--CCCcHHHHHHHHHHHHHcCC
Confidence 2223433 34235789999999988864
No 243
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=68.22 E-value=59 Score=30.34 Aligned_cols=103 Identities=18% Similarity=0.170 Sum_probs=62.8
Q ss_pred HHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHH
Q 026637 66 LQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLL 145 (235)
Q Consensus 66 l~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL 145 (235)
....|++++|++..+.. .. -..|=-+|-.++..| +++.|.+.|.+. + + .+.+.+|
T Consensus 662 ~l~~~~~~~A~~~~~~~-----~~-----~~~W~~la~~al~~~-~~~~A~~~y~~~------~-------d-~~~l~~l 716 (814)
T 3mkq_A 662 ALKVGQLTLARDLLTDE-----SA-----EMKWRALGDASLQRF-NFKLAIEAFTNA------H-------D-LESLFLL 716 (814)
T ss_dssp HHHHTCHHHHHHHHTTC-----CC-----HHHHHHHHHHHHHTT-CHHHHHHHHHHH------T-------C-HHHHHHH
T ss_pred hhhcCCHHHHHHHHHhh-----Cc-----HhHHHHHHHHHHHcC-CHHHHHHHHHHc------c-------C-hhhhHHH
Confidence 45678888877774322 11 245667999999998 999999999541 1 1 3555666
Q ss_pred HHHHhcCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCchHHHHHHHHHHH
Q 026637 146 LRVYVRGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEVSKAEDLLKGLKS 206 (235)
Q Consensus 146 ~Rl~l~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~~~~~~ll~~~~~ 206 (235)
++. .|. .+.+..++.....+ ++.... ..++...|+.+.+.+++..+.+
T Consensus 717 ~~~--~~~----~~~~~~~~~~a~~~-~~~~~A------~~~~~~~g~~~~a~~~~~~~~~ 764 (814)
T 3mkq_A 717 HSS--FNN----KEGLVTLAKDAETT-GKFNLA------FNAYWIAGDIQGAKDLLIKSQR 764 (814)
T ss_dssp HHH--TTC----HHHHHHHHHHHHHT-TCHHHH------HHHHHHHTCHHHHHHHHHHTTC
T ss_pred HHH--cCC----HHHHHHHHHHHHHc-CchHHH------HHHHHHcCCHHHHHHHHHHcCC
Confidence 554 342 35677777666542 222211 2234557787777777666554
No 244
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=63.78 E-value=40 Score=30.59 Aligned_cols=98 Identities=9% Similarity=0.004 Sum_probs=73.1
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhCCC--CH----HHHHHHHHHHHHcCCHHHHHHHHHHchhhhcc--CCcchhHHHH
Q 026637 27 ILAFSLLELGQMSDAEEAAKKGLKINKH--DC----WSQHALCHVLQHDCCFKEAVQFMEECSSTWSS--CSSFMYTHNW 98 (235)
Q Consensus 27 ~~Af~L~e~g~~~~Ae~~arrAL~L~P~--da----wA~halahvl~~~Gr~~egi~~l~~a~~~w~~--~~~~l~~H~~ 98 (235)
-++-.+.+.|+|.+|.+...+.+.--++ |. ..+-.-.-++..+|+...+.+.++++...-.. +++-+.+-+-
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~ 183 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALD 183 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHH
Confidence 4677888999999999998888874333 32 22334456677899999999999998654322 3444566678
Q ss_pred HHHHHHHH-hCCCCHHHHHHHHHhhchh
Q 026637 99 WHVALCYL-EGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 99 WHlAL~~l-e~G~~~deAl~~yd~~i~~ 125 (235)
.--|++++ +.+ +|.+|-..|=.....
T Consensus 184 ~~~Gi~~l~~~r-dyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 184 LQSGILHAADER-DFKTAFSYFYEAFEG 210 (394)
T ss_dssp HHHHHHHHHTTS-CHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHhcc-CHHHHHHHHHHHHhc
Confidence 88999999 888 999999998777654
No 245
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.40 E-value=1.3e+02 Score=30.08 Aligned_cols=93 Identities=12% Similarity=-0.022 Sum_probs=69.3
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhh------------------ccC
Q 026637 28 LAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTW------------------SSC 89 (235)
Q Consensus 28 ~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w------------------~~~ 89 (235)
+...+...|+++- ++.-+...|.+++.-.-+|.++...|++++|...++++...- +..
T Consensus 816 l~~~L~~~~~~~~----a~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e 891 (950)
T 4gq2_M 816 LVEKLFLFKQYNA----CMQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 891 (950)
T ss_dssp HHHHHHHTTCHHH----HHHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTT
T ss_pred HHHHHHHhcHHHH----HHHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCccc
Confidence 4456777888875 455678999999999999999999999999999999874211 111
Q ss_pred CcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 90 SSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 90 ~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
...+..+++-|..-..-..+ -++-++.....+|..
T Consensus 892 ~~~~~~~YY~hV~~LFE~~~-a~~~vi~fA~lAI~~ 926 (950)
T 4gq2_M 892 HQNLLSCYYLHLSKKLFEES-AYIDALEFSLLADAS 926 (950)
T ss_dssp TCSHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHT
T ss_pred ccchhHHHHHHHHHHHHhcC-CHHHHHHHHHHHHhh
Confidence 11223457777777666666 899999999888875
No 246
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=56.46 E-value=55 Score=31.38 Aligned_cols=95 Identities=9% Similarity=-0.004 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHH
Q 026637 23 FIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVA 102 (235)
Q Consensus 23 ~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlA 102 (235)
.....++..+...+...++..-..+..... .+.......+-.-...|+.+++..+++.....-...+ +..+| +|
T Consensus 253 ~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~---r~~YW--~~ 326 (618)
T 1qsa_A 253 ELRDIVAWRLMGNDVTDEQAKWRDDAIMRS-QSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKD---EWRYW--QA 326 (618)
T ss_dssp HHHHHHHHTSCSTTCCHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSH---HHHHH--HH
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHhccccC-CChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccH---hHHHH--HH
Confidence 455556666666663445555555555433 4433344444344467999999999887644322212 33455 78
Q ss_pred HHHHhCCCCHHHHHHHHHhhch
Q 026637 103 LCYLEGHSPMRKVLEIYDNHIW 124 (235)
Q Consensus 103 L~~le~G~~~deAl~~yd~~i~ 124 (235)
..+...| +.++|..+|.+...
T Consensus 327 ra~~~~g-~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 327 DLLLERG-REAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTT-CHHHHHHHHHHHHT
T ss_pred HHHHHcC-CHHHHHHHHHHHhc
Confidence 8888887 89999999977654
No 247
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=54.92 E-value=1.3e+02 Score=27.86 Aligned_cols=126 Identities=10% Similarity=0.013 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHh
Q 026637 60 HALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYL 139 (235)
Q Consensus 60 halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~ 139 (235)
-.+|...-+++..+.|..|+.++...+|..+ +.+-|+|..+...| +.-+|+=.|-+.+.-. . +.. .=-
T Consensus 156 ~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G-----~~~nqLavla~~~~-~~l~a~y~y~rsl~~~---~--Pf~-~a~ 223 (497)
T 1ya0_A 156 VHLGDIARYRNQTSQAESYYRHAAQLVPSNG-----QPYNQLAILASSKG-DHLTTIFYYCRSIAVK---F--PFP-AAS 223 (497)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCTTBS-----HHHHHHHHHHHHTT-CHHHHHHHHHHHHSSS---B--CCH-HHH
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHhCCCCC-----chHHHHHHHHhccc-ccHHHHHHHHHHHhcC---C--CCh-hHH
Confidence 3467777778888999999999999998853 44448999999988 8888998888888763 1 122 224
Q ss_pred HHHHHHHHHHhcCcccccccchHHHHHHHHhhhcchhcchhhHHHHHHHhcCCCc---hHHHHHHHHHHHHh
Q 026637 140 NALGLLLRVYVRGELDVFGNRLKVLADCVADQANWYLECHLDLLILWALANTGEV---SKAEDLLKGLKSRH 208 (235)
Q Consensus 140 da~sLL~Rl~l~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~~~al~~ag~~---~~~~~ll~~~~~~~ 208 (235)
+....++.-.+.+.+. ...+|. .++-...|.-+|. +-|.+.+-. +..+++++.+....
T Consensus 224 ~nL~~~f~~~~~~~~~-~~~~~~---------~~~~~~~Fv~lh~-~lf~~~~~~~f~~l~~~~~~~l~~~l 284 (497)
T 1ya0_A 224 TNLQKALSKALESRDE-VKTKWG---------VSDFIKAFIKFHG-HVYLSKSLEKLSPLREKLEEQFKELL 284 (497)
T ss_dssp HHHHHHHHHHTTSCCC-CCSSCC---------HHHHHHHHHHHHH-HHHHTCCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh-ccccCC---------hHHHHHHHHHHHH-HHhcCCChhhHHHHHHHHHHHHHHHH
Confidence 4555565555555542 233442 1223335888884 334444322 22334555555544
No 248
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=45.32 E-value=1.3e+02 Score=31.32 Aligned_cols=115 Identities=9% Similarity=-0.035 Sum_probs=78.9
Q ss_pred CChhhHHHHHHhhcC----CCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCCH-HH
Q 026637 2 GRPDLCFDIIHQVLP----YNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLK--INKHDCWSQHALCHVLQHDCCF-KE 74 (235)
Q Consensus 2 G~~~~al~~~~ral~----~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~--L~P~dawA~halahvl~~~Gr~-~e 74 (235)
|+.++|+..+.+.-. -...+...++.+=-++...|++++|.+++++-.+ +.| |...+.++-+.+...|+. ++
T Consensus 141 G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~glcK~G~~~e~ 219 (1134)
T 3spa_A 141 DQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQCMGRQDQDAGT 219 (1134)
T ss_dssp TCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHHHHTCCHHH
T ss_pred CCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHHHHhCCCcHHH
Confidence 677788877754321 1345677888888899999999999999998765 556 677999999999999985 78
Q ss_pred HHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhh
Q 026637 75 AVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKEL 127 (235)
Q Consensus 75 gi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~ 127 (235)
+...+++....--. |+. .+.+ +.+. +++-+.+++..++. .|+.
T Consensus 220 A~~Ll~EM~~kG~~-PD~-vtY~------~ll~-~~eR~~vL~~Vrkv-~P~f 262 (1134)
T 3spa_A 220 IERCLEQMSQEGLK-LQA-LFTA------VLLS-EEDRATVLKAVHKV-KPTF 262 (1134)
T ss_dssp HHHHHHHHHHHTCC-SHH-HHHH------SCCC-HHHHHHHHHHHGGG-CCCC
T ss_pred HHHHHHHHHHcCCC-CCh-hhcc------cccC-hhhHHHHHHHHHHh-Cccc
Confidence 88999888665433 321 1111 1122 22456777777544 5543
No 249
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=42.86 E-value=83 Score=30.15 Aligned_cols=80 Identities=11% Similarity=-0.050 Sum_probs=57.6
Q ss_pred hhhHHHHHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHch
Q 026637 4 PDLCFDIIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECS 83 (235)
Q Consensus 4 ~~~al~~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~ 83 (235)
.+++...+.++.+..+++.........++ ..|+++.|...+++.-.-.+..+-+..-+|-+++.+|+.+++...+++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~e~~~r~Al-r~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 268 TDEQAKWRDDAIMRSQSTSLIERRVRMAL-GTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp CHHHHHHHHHHHHTCCCHHHHHHHHHHHH-HHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHhccccCCChHHHHHHHHHHH-HCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 34555566665554444444555555666 45999999998877666555667788999999999999999999888765
Q ss_pred h
Q 026637 84 S 84 (235)
Q Consensus 84 ~ 84 (235)
.
T Consensus 347 ~ 347 (618)
T 1qsa_A 347 Q 347 (618)
T ss_dssp T
T ss_pred c
Confidence 4
No 250
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.51 E-value=1.6e+02 Score=26.21 Aligned_cols=101 Identities=9% Similarity=-0.058 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCc-chhHHHHH
Q 026637 24 IFGILAFSLLELGQMSDAEEAAKKGLKINKHDC---WSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSS-FMYTHNWW 99 (235)
Q Consensus 24 ~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~da---wA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~-~l~~H~~W 99 (235)
++..+|--+.+.|++++|.+...+.......+. .....+.-+....+++..+...+.++.......+. -...++--
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 556677779999999999999999998876664 45555666778899999999999998665443221 12233333
Q ss_pred HHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 100 HVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 100 HlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
-.+++++..+ +|.+|-..|-..+..
T Consensus 213 ~~gl~~l~~r-~f~~Aa~~f~e~~~t 237 (429)
T 4b4t_R 213 YYGIHCLAVR-NFKEAAKLLVDSLAT 237 (429)
T ss_dssp HHHHGGGGTS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-hHHHHHHHHHHHhcc
Confidence 3678888888 899999988776554
No 251
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=40.32 E-value=1.2e+02 Score=22.85 Aligned_cols=77 Identities=17% Similarity=0.151 Sum_probs=52.4
Q ss_pred HHHHhC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhC
Q 026637 31 SLLELG--QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEG 108 (235)
Q Consensus 31 ~L~e~g--~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~ 108 (235)
+|+-+| +++||..+++ -|+.+|+.--+.--...-+--+|++++|..+.+... ||+. --| +||+--..
T Consensus 14 AL~gTG~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~pdl------epw--~ALce~rl 82 (116)
T 2p58_C 14 ALIGTGNHYHEEANCIAE-WLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA--YPDL------EPW--LALCEYRL 82 (116)
T ss_dssp HHHHHTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC--CGGG------HHH--HHHHHHHH
T ss_pred HHHHccchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC--CchH------HHH--HHHHHHhc
Confidence 566666 7888887764 678888832233334455667999999999977655 6553 233 78888888
Q ss_pred CCCHHHHHHHH
Q 026637 109 HSPMRKVLEIY 119 (235)
Q Consensus 109 G~~~deAl~~y 119 (235)
| --+++....
T Consensus 83 G-l~s~le~rL 92 (116)
T 2p58_C 83 G-LGSALESRL 92 (116)
T ss_dssp T-CHHHHHHHH
T ss_pred c-cHHHHHHHH
Confidence 7 666666555
No 252
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=39.85 E-value=1.1e+02 Score=22.96 Aligned_cols=77 Identities=19% Similarity=0.184 Sum_probs=52.6
Q ss_pred HHHHhC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhC
Q 026637 31 SLLELG--QMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEG 108 (235)
Q Consensus 31 ~L~e~g--~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~ 108 (235)
+|+-+| +++||..+++ -|+.+|+.--+.--...-+--+|++++|..+.+... ||+. --| +||+--..
T Consensus 13 AL~gTG~H~HqEA~tIAd-wL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~pdl------epw--~ALce~rl 81 (115)
T 2uwj_G 13 ALAGSGQHCHEEALCIAE-WLERLGQDEAARLIRISSLANQGRYQEALAFAHGNP--WPAL------EPW--FALCEWHL 81 (115)
T ss_dssp HHHHHTTTCHHHHHHHHH-HHHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTCC--CGGG------HHH--HHHHHHHT
T ss_pred HHHHccchHHHHHHHHHH-HHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC--CchH------HHH--HHHHHHhc
Confidence 566666 7888887764 678888832233334455667999999999976554 6552 233 88888888
Q ss_pred CCCHHHHHHHH
Q 026637 109 HSPMRKVLEIY 119 (235)
Q Consensus 109 G~~~deAl~~y 119 (235)
| --+++....
T Consensus 82 G-l~s~le~rL 91 (115)
T 2uwj_G 82 G-LGAALDRRL 91 (115)
T ss_dssp T-CHHHHHHHH
T ss_pred c-cHHHHHHHH
Confidence 7 667766655
No 253
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=36.83 E-value=3.5e+02 Score=27.41 Aligned_cols=92 Identities=12% Similarity=-0.013 Sum_probs=67.1
Q ss_pred HHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhh-------------------cc
Q 026637 28 LAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTW-------------------SS 88 (235)
Q Consensus 28 ~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w-------------------~~ 88 (235)
+...+...|+++-+.+ -+...|.+++.-.-+|.++...|++++|...++++...- ..
T Consensus 818 l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~ 893 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYH 893 (1139)
T ss_dssp HHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTT
T ss_pred HHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhccccccccccc
Confidence 3345777888876654 457889999999999999999999999999998873211 11
Q ss_pred CCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 89 CSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 89 ~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
.++. ..+++-|+....-..| .++.|++....+|..
T Consensus 894 ~~~~-l~~YY~hv~~LFe~~~-~~~~vi~fa~lAi~~ 928 (1139)
T 4fhn_B 894 HQNL-LSCYYLHLSKKLFEES-AYIDALEFSLLADAS 928 (1139)
T ss_dssp SCCS-SHHHHHHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred cccc-HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHh
Confidence 1111 2356667765554666 899999999888876
No 254
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=33.85 E-value=1.8e+02 Score=23.19 Aligned_cols=57 Identities=21% Similarity=0.174 Sum_probs=47.3
Q ss_pred HHH-HHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchh
Q 026637 28 LAF-SLLELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSS 84 (235)
Q Consensus 28 ~Af-~L~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~ 84 (235)
+|. .+.+.|.-|+=++..+.-+--+|-+|.-+..+|.+|...|...++-+.+.++-.
T Consensus 96 ~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~ 153 (172)
T 1wy6_A 96 KALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACK 153 (172)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHH
Confidence 344 788999999999998887777888899999999999999999999999888743
No 255
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=33.42 E-value=61 Score=22.69 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhh
Q 026637 38 MSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTW 86 (235)
Q Consensus 38 ~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w 86 (235)
.+.|...+.+|++. ...|+++||+..+.++...+
T Consensus 16 ~~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie~l 49 (83)
T 2w2u_A 16 EEMARKYAINAVKA---------------DKEGNAEEAITNYKKAIEVL 49 (83)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHHHH
Confidence 45677777777554 67788888888877776654
No 256
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=30.52 E-value=1.5e+02 Score=23.74 Aligned_cols=45 Identities=22% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHhCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHc
Q 026637 33 LELGQMSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEEC 82 (235)
Q Consensus 33 ~e~g~~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a 82 (235)
.++|+++.|.+.++.. ++..-+..||..-..+|+++=+..-+.+.
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
No 257
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=29.63 E-value=78 Score=22.02 Aligned_cols=34 Identities=12% Similarity=0.145 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHchhhh
Q 026637 38 MSDAEEAAKKGLKINKHDCWSQHALCHVLQHDCCFKEAVQFMEECSSTW 86 (235)
Q Consensus 38 ~~~Ae~~arrAL~L~P~dawA~halahvl~~~Gr~~egi~~l~~a~~~w 86 (235)
.+.|...+.+|++. ...|++++|+..+.++...+
T Consensus 8 ~~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie~l 41 (83)
T 2v6y_A 8 EDMARKYAILAVKA---------------DKEGKVEDAITYYKKAIEVL 41 (83)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHHHH
Confidence 34677777777554 67888888888887776654
No 258
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=29.04 E-value=50 Score=33.18 Aligned_cols=40 Identities=13% Similarity=0.067 Sum_probs=35.1
Q ss_pred HHHhhcCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 026637 10 IIHQVLPYNQQEDFIFGILAFSLLELGQMSDAEEAAKKGL 49 (235)
Q Consensus 10 ~~~ral~~~p~~~~~~g~~Af~L~e~g~~~~Ae~~arrAL 49 (235)
.+...++..|.++..-.++|-++.++|++++|...+++|-
T Consensus 828 ~a~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 828 ACMQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 4555677888899989999999999999999999999876
No 259
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=28.79 E-value=4.8e+02 Score=26.53 Aligned_cols=188 Identities=14% Similarity=0.009 Sum_probs=108.6
Q ss_pred CCChhhHHHHHHhhcCCC-CCCh--hHHHHHHHHHHHhCCHHHHHHHHHHHHhhCC---C---CH----HHHHHHHHHHH
Q 026637 1 MGRPDLCFDIIHQVLPYN-QQED--FIFGILAFSLLELGQMSDAEEAAKKGLKINK---H---DC----WSQHALCHVLQ 67 (235)
Q Consensus 1 ~G~~~~al~~~~ral~~~-p~~~--~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P---~---da----wA~halahvl~ 67 (235)
.|+.++.+..+.+.++.. .+++ ..=+.+|+++..+|..+++.+.-..-|.-+. + .. -|.-.+|-++.
T Consensus 387 ~g~~~~gl~~L~~yL~~~~s~~~~ik~GAllaLGli~ag~~~~~~~lL~~~L~~~~~~~~~~~~~~ir~gAaLGLGla~~ 466 (963)
T 4ady_A 387 KGNLLEGKKVMAPYLPGSRASSRFIKGGSLYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGLAAM 466 (963)
T ss_dssp SSCTTTHHHHHTTTSTTSCCSCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHST
T ss_pred cCchHHHHHHHHHhccccCCCcHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHcCccccccccccHHHHHHHHHHHHHHhc
Confidence 367778888998888843 3444 4667899999999988888777777665432 0 12 24445555555
Q ss_pred HcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHH
Q 026637 68 HDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLR 147 (235)
Q Consensus 68 ~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~R 147 (235)
-+|+ ++.++.+......... ..+.--..-+++.++-.| +-+.+-.+........ .+ ...+..+-+.+|+
T Consensus 467 GS~~-eev~e~L~~~L~dd~~---~~~~~AalALGli~vGTg-n~~ai~~LL~~~~e~~--~e--~vrR~aalgLGll-- 535 (963)
T 4ady_A 467 GSAN-IEVYEALKEVLYNDSA---TSGEAAALGMGLCMLGTG-KPEAIHDMFTYSQETQ--HG--NITRGLAVGLALI-- 535 (963)
T ss_dssp TCCC-HHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHCS--CH--HHHHHHHHHHHHH--
T ss_pred CCCC-HHHHHHHHHHHhcCCH---HHHHHHHHHHhhhhcccC-CHHHHHHHHHHHhccC--cH--HHHHHHHHHHHhh--
Confidence 4554 4667777666553221 111112223566666666 6555555554433221 11 1122223333333
Q ss_pred HHhcCcccccccchHHHHHHHHhhhcchhcchhhHHH-HHHHhcCCCchHHHHHHHHHHH
Q 026637 148 VYVRGELDVFGNRLKVLADCVADQANWYLECHLDLLI-LWALANTGEVSKAEDLLKGLKS 206 (235)
Q Consensus 148 l~l~G~~~~~g~rw~~la~~~~~~~~~~~~~F~d~H~-~~al~~ag~~~~~~~ll~~~~~ 206 (235)
..|- ++-.+.+.+.+.. ..++..-+.-+.+ .++++|.|+...+++||.-+..
T Consensus 536 --~~g~----~e~~~~li~~L~~-~~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~~ 588 (963)
T 4ady_A 536 --NYGR----QELADDLITKMLA-SDESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAVS 588 (963)
T ss_dssp --TTTC----GGGGHHHHHHHHH-CSCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHH
T ss_pred --hCCC----hHHHHHHHHHHHh-CCCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcc
Confidence 3343 3566777777664 2333334444443 5788899999999999988775
No 260
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=27.55 E-value=69 Score=23.48 Aligned_cols=70 Identities=14% Similarity=-0.044 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCcccccccchHHHH
Q 026637 94 YTHNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNRLKVLA 165 (235)
Q Consensus 94 ~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~~g~rw~~la 165 (235)
..|..-=.|-.++..| .||+|++...++..--.+.-.-.......++..|=---++.-+++ +.+||+..-
T Consensus 14 ~AH~~~RrAe~ll~~g-kydeAIech~kAa~yL~eAmkltqs~qa~~SLqLQrd~HlKQ~~l-iq~r~k~~~ 83 (97)
T 2crb_A 14 LAHQQSRRADRLLAAG-KYEEAISCHRKATTYLSEAMKLTESEQAHLSLELQRDSHMKQLLL-IQERWKRAK 83 (97)
T ss_dssp HHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred hhhHhhhHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH-HHHHHHHhh
Confidence 4555555677778887 999999988776532100000011223345444443344666664 578998653
No 261
>2ca5_A MXIH; transport protein, type III secretion system, needle complex, protein transport, virulence; 2.10A {Shigella flexneri} SCOP: a.2.20.1 PDB: 2v6l_0 3j0r_A
Probab=26.28 E-value=66 Score=23.04 Aligned_cols=33 Identities=12% Similarity=-0.054 Sum_probs=26.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 026637 36 GQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH 68 (235)
Q Consensus 36 g~~~~Ae~~arrAL~L~P~dawA~halahvl~~ 68 (235)
+.+-++...+.++|+-+|.||-.+..+=|.+.+
T Consensus 24 ~~~~~~v~~Ai~~L~~~PsnPa~LAeyQ~kl~e 56 (85)
T 2ca5_A 24 QTLQGELTLALDKLAKNPSNPQLLAEYQSKLSE 56 (85)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 356678889999999999999888877776643
No 262
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=26.20 E-value=2.4e+02 Score=22.23 Aligned_cols=64 Identities=6% Similarity=-0.062 Sum_probs=52.1
Q ss_pred HHHHHHHHhCCHHHHHHHHHHHHhhCCCC--------HHHH-HHHHHHHHHcCCHHHHHHHHHHchhhhccCC
Q 026637 27 ILAFSLLELGQMSDAEEAAKKGLKINKHD--------CWSQ-HALCHVLQHDCCFKEAVQFMEECSSTWSSCS 90 (235)
Q Consensus 27 ~~Af~L~e~g~~~~Ae~~arrAL~L~P~d--------awA~-halahvl~~~Gr~~egi~~l~~a~~~w~~~~ 90 (235)
..+..+-..|+|=+|-++.+....-.|.. +-++ -++|.++...|+.+-|...++++...-..++
T Consensus 37 ~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~L~~~~ 109 (161)
T 2ijq_A 37 VHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQYFRGVP 109 (161)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC
Confidence 34446777899999999999999888777 5677 8888899999999999999999977665544
No 263
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=25.19 E-value=80 Score=28.32 Aligned_cols=67 Identities=10% Similarity=-0.190 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHchhhhccCCcchhHHHHHHHHHHHHhCCCCHHHHHHHHHhhchh
Q 026637 56 CWSQHALCHVLQHDCCFKEAVQFMEECSSTWSSCSSFMYTHNWWHVALCYLEGHSPMRKVLEIYDNHIWK 125 (235)
Q Consensus 56 awA~halahvl~~~Gr~~egi~~l~~a~~~w~~~~~~l~~H~~WHlAL~~le~G~~~deAl~~yd~~i~~ 125 (235)
..+...+|..++..|+.++|++.+.+....-.. +.. ..-++|+.--.++..+ ++..|...+.+.-..
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~-~~~-kid~~l~~irl~l~~~-d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAIS-TGA-KIDVMLTIARLGFFYN-DQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTC-CCS-HHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCC-hHH-HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHh
Confidence 347889999999999999999999998765444 222 3457888888888888 999999999886544
No 264
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=24.60 E-value=1.1e+02 Score=22.46 Aligned_cols=28 Identities=21% Similarity=0.132 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 026637 22 DFIFGILAFSLLELGQMSDAEEAAKKGL 49 (235)
Q Consensus 22 ~~~~g~~Af~L~e~g~~~~Ae~~arrAL 49 (235)
+.++.-.|-.+...|+||+|++.-++|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 3456666777777888888877666654
No 265
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=23.32 E-value=1e+02 Score=24.19 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=23.6
Q ss_pred hHHHHHHHHHHHhCCHHHHHHHHHHHHhhC
Q 026637 23 FIFGILAFSLLELGQMSDAEEAAKKGLKIN 52 (235)
Q Consensus 23 ~~~g~~Af~L~e~g~~~~Ae~~arrAL~L~ 52 (235)
.++--.|..++..|++.+|+++.+++++-+
T Consensus 102 lfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~ 131 (152)
T 4a1g_A 102 PLYIAWAGHLEAQGELQHASAVLQRGIQNQ 131 (152)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 455556668888999999999999998854
No 266
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=22.88 E-value=4.1e+02 Score=23.75 Aligned_cols=195 Identities=12% Similarity=0.039 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhCCCCHHHHHHHH--HHHHH----cCCHHHHHHHHHHchhhhccC--CcchhH
Q 026637 24 IFGILAFSLLELGQMSDAEEAAKKGLKINKHDCWSQHALC--HVLQH----DCCFKEAVQFMEECSSTWSSC--SSFMYT 95 (235)
Q Consensus 24 ~~g~~Af~L~e~g~~~~Ae~~arrAL~L~P~dawA~hala--hvl~~----~Gr~~egi~~l~~a~~~w~~~--~~~l~~ 95 (235)
+..-+|-.+...|++++-.+........=+.-+-|-.+-. .+..+ .|..+.-++...++.. |... -.|++.
T Consensus 21 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~~~~~~~~~~~~~~~~-~a~~~~r~flr~ 99 (394)
T 3txn_A 21 GILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMDAGTGIEVQLCKDCIE-WAKQEKRTFLRQ 99 (394)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHH-HHHHTTCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 3445566777788888877777776666655555544432 11111 2444444444433321 2110 124444
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHhhchhhhcCCCCCchHhHhHHHHHHHHHHhcCcccccccchHHHHHHHHh---h-
Q 026637 96 HNWWHVALCYLEGHSPMRKVLEIYDNHIWKELEKPDAVHPEVYLNALGLLLRVYVRGELDVFGNRLKVLADCVAD---Q- 171 (235)
Q Consensus 96 H~~WHlAL~~le~G~~~deAl~~yd~~i~~~~~~~~~~~~~~~~da~sLL~Rl~l~G~~~~~g~rw~~la~~~~~---~- 171 (235)
.+.=.+|-.|++.| +|.+|++++.+... ++.+.+ ...-+++-..+--++...--+. .+-+........ .
T Consensus 100 ~l~~kL~~l~~~~~-~y~~a~~~i~~l~~-~~~~~d--d~~~llev~lle~~~~~~~~n~---~k~k~~l~~a~~~~~ai 172 (394)
T 3txn_A 100 SLEARLIALYFDTA-LYTEALALGAQLLR-ELKKLD--DKNLLVEVQLLESKTYHALSNL---PKARAALTSARTTANAI 172 (394)
T ss_dssp HHHHHHHHHHHHTT-CHHHHHHHHHHHHH-HHTTSS--CTHHHHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhh-hHHHHHHHHHHHHH-HHhccc--cchhHHHHHHHHHHHHHHhccH---HHHHHHHHHHHhhhccC
Confidence 44446899999998 99999999966554 443322 2334667777776666543331 122222222211 1
Q ss_pred -hcchhcchhhHHHHHHHh-cCCCc-hHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHH
Q 026637 172 -ANWYLECHLDLLILWALA-NTGEV-SKAEDLLKGLKSRHSKMIKKKQELMQTGVQVSS 227 (235)
Q Consensus 172 -~~~~~~~F~d~H~~~al~-~ag~~-~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~~ 227 (235)
.+....+-.+.-.-+... ..++- .++..++++.+.+.+.+.++..+. -+=+.||.
T Consensus 173 ~~~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~f~~~~~~~~~~~-lkYlvL~a 230 (394)
T 3txn_A 173 YCPPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEGFDSVDSVKALTS-LKYMLLCK 230 (394)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTTCHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhcccccccHHHHHH-HHHHHHHH
Confidence 122234455666655555 56664 445677999888875544433232 23344444
No 267
>2g0u_A Type III secretion system needle protein; helix-turn-helix, unknown function; NMR {Burkholderia pseudomallei} SCOP: a.2.20.1
Probab=20.30 E-value=1.6e+02 Score=21.28 Aligned_cols=33 Identities=12% Similarity=0.109 Sum_probs=26.6
Q ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 026637 36 GQMSDAEEAAKKGLKINKHDCWSQHALCHVLQH 68 (235)
Q Consensus 36 g~~~~Ae~~arrAL~L~P~dawA~halahvl~~ 68 (235)
+.+..+...+..+|+.+|+||-.+..+-+.+..
T Consensus 30 ~~~~~~l~~Al~~L~~~psNPa~LAe~Qa~lse 62 (92)
T 2g0u_A 30 KDLNKQLQDAQANLTKNPSDPTALANYQMIMSE 62 (92)
T ss_dssp HHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Confidence 366778888999999999999988877766543
Done!