BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 026640
         (235 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A6H5Y1|MPP9_MOUSE M-phase phosphoprotein 9 OS=Mus musculus GN=Mphosph9 PE=2 SV=1
          Length = 991

 Score = 35.4 bits (80), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/39 (43%), Positives = 22/39 (56%)

Query: 25  RLSVLPVKCLSSRQSRDSDSDSDLRTTPSPSSTSGFSPY 63
           R+S  P   L    SR SD+DS  + + +PS  SGFS Y
Sbjct: 279 RISFSPDSVLEPSLSRHSDTDSSSQASHNPSQVSGFSKY 317


>sp|P37475|SP2E_BACSU Stage II sporulation protein E OS=Bacillus subtilis (strain 168)
           GN=spoIIE PE=1 SV=1
          Length = 827

 Score = 33.5 bits (75), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 9/83 (10%)

Query: 157 SMAAASAYFLYILSTNFSGATCSYCLTSALLSFSL---FFISLKEFSVEEIQKVLGVQ-- 211
           SMAAA A F+Y  +  F+       +  A LSF L   F  SL  F+V+++++ L ++  
Sbjct: 135 SMAAARAGFVYAQNGVFTTYDYVMAIVEAGLSFILTLIFLQSLPIFTVKKVKQSLKIEEI 194

Query: 212 ----LCIASLVVAALSTSYSSIQ 230
               + IAS++      SY  +Q
Sbjct: 195 ICFMILIASVLTGLAGLSYQGMQ 217


>sp|Q8NFJ6|PKR2_HUMAN Prokineticin receptor 2 OS=Homo sapiens GN=PROKR2 PE=1 SV=1
          Length = 384

 Score = 30.8 bits (68), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 162 SAYFLYILSTNFSGATCSYCLTSALLSFSLFFISLKEFSVEEIQKVL 208
            +YFL+I    F G   +  L  A +S  L+F ++  F  E+I+K L
Sbjct: 221 KSYFLFIFGVEFVGPVVTMTLCYARISRELWFKAVPGFQTEQIRKRL 267


>sp|Q8SPN2|PKR1_BOVIN Prokineticin receptor 1 OS=Bos taurus GN=PROKR1 PE=2 SV=1
          Length = 393

 Score = 30.8 bits (68), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%)

Query: 162 SAYFLYILSTNFSGATCSYCLTSALLSFSLFFISLKEFSVEEIQKVL 208
            +YFL+I    F G   +  L  A +S  L+F ++  F  E+I+K L
Sbjct: 230 KSYFLFIFGIEFVGPVVTMTLCYARISRELWFKAVPGFQTEQIRKRL 276


>sp|A5PK13|LRC8C_BOVIN Leucine-rich repeat-containing protein 8C OS=Bos taurus GN=LRRC8C
           PE=2 SV=1
          Length = 803

 Score = 30.4 bits (67), Expect = 9.9,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 165 FLYILSTNFSGATCSYCLTSALLSFSLFFISLKEFSVEEIQKVLGV 210
           F Y+   +  G TC Y L      + LF+ SLKE+S E +++  G+
Sbjct: 321 FCYLCFVSIYGLTCLYTL------YWLFYRSLKEYSFEYVRQETGI 360


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.135    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,311,989
Number of Sequences: 539616
Number of extensions: 3160380
Number of successful extensions: 8377
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 8371
Number of HSP's gapped (non-prelim): 16
length of query: 235
length of database: 191,569,459
effective HSP length: 114
effective length of query: 121
effective length of database: 130,053,235
effective search space: 15736441435
effective search space used: 15736441435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)