Query 026640
Match_columns 235
No_of_seqs 127 out of 427
Neff 5.1
Searched_HMMs 13730
Date Mon Mar 25 18:28:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026640.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026640hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hi7b1 a.29.15.1 (B:14-162) D 58.7 14 0.001 27.0 7.0 59 70-132 68-146 (149)
2 d1wjpa2 g.37.1.1 (A:43-66) Zin 35.1 4.3 0.00031 22.2 0.2 7 176-182 1-7 (26)
3 d2hi7b1 a.29.15.1 (B:14-162) D 29.7 18 0.0013 26.4 3.2 26 167-193 18-43 (149)
4 d1q90g_ f.23.26.1 (G:) PetG su 17.4 45 0.0033 18.5 2.4 12 71-82 18-29 (30)
5 d2dlka1 g.37.1.1 (A:8-37) Zinc 16.3 21 0.0015 19.9 0.7 15 91-107 2-16 (30)
6 d1cola_ f.1.1.1 (A:) Colicin A 13.4 64 0.0046 25.4 3.2 27 106-132 156-182 (197)
7 d1vkea_ a.152.1.2 (A:) Hypothe 10.9 1.4E+02 0.01 20.6 4.3 33 177-214 55-87 (118)
8 d2ouwa1 a.152.1.4 (A:1-134) Hy 10.9 88 0.0064 21.7 3.2 29 175-208 80-108 (134)
9 d1wfha_ g.80.1.1 (A:) Zinc fin 7.1 1.5E+02 0.011 19.0 2.7 27 7-33 1-32 (64)
10 d2o4da1 a.152.1.3 (A:2-145) Hy 6.5 81 0.0059 22.1 1.2 14 176-189 45-58 (144)
No 1
>d2hi7b1 a.29.15.1 (B:14-162) Disulfide bond formation protein DsbB {Escherichia coli [TaxId: 562]}
Probab=58.66 E-value=14 Score=27.03 Aligned_cols=59 Identities=15% Similarity=0.099 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHhHhc-CCCCCCCCC------------------C-CCccccccccchhccCCchhHHHHHHHHHHHHH
Q 026640 70 GGVGFLETTYLSYLKLT-NSDAFCPIG------------------G-ASCGDVLNSDYAVVFGVPLPFIGMFAYGLVAVL 129 (235)
Q Consensus 70 a~iGl~~S~YLt~~kl~-~~~~~Cdin------------------~-vsC~~Vl~S~yA~vfGiPnallGl~~Y~~vl~l 129 (235)
+.+|...+.|-.+.+.. .....|+.+ + .+|+++. =++||++.|-+-++.+.+++++
T Consensus 68 ~~~G~~~a~~h~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~C~e~~----w~~lGlSma~wn~i~~~~~~~~ 143 (149)
T d2hi7b1 68 AFRGVQLTYEHTMLQLYPSPFATCDFMVRFPEWLPLDKWVPQVFVASGDSAERQ----WDFLGLEMPQWLLGIFIAYLIV 143 (149)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSCCCCCCCCCTTSCGGGGSSTTGGGC-------------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCccccccccccccCCHHHHHHHHhCCCCCccccc----chhcccCHHHHHHHHHHHHHHH
Confidence 34788888877766542 333455422 2 3466552 1489999999999999988877
Q ss_pred HHH
Q 026640 130 GLL 132 (235)
Q Consensus 130 ~l~ 132 (235)
.+.
T Consensus 144 ~~~ 146 (149)
T d2hi7b1 144 AVL 146 (149)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 2
>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.07 E-value=4.3 Score=22.19 Aligned_cols=7 Identities=57% Similarity=1.497 Sum_probs=5.5
Q ss_pred CcchhhH
Q 026640 176 ATCSYCL 182 (235)
Q Consensus 176 alCpyC~ 182 (235)
+.||||-
T Consensus 1 avcpycs 7 (26)
T d1wjpa2 1 AVCPYCS 7 (26)
T ss_dssp BCCTTTC
T ss_pred CCCCcce
Confidence 5799994
No 3
>d2hi7b1 a.29.15.1 (B:14-162) Disulfide bond formation protein DsbB {Escherichia coli [TaxId: 562]}
Probab=29.70 E-value=18 Score=26.35 Aligned_cols=26 Identities=12% Similarity=0.323 Sum_probs=17.0
Q ss_pred HHHHHHHhCCcchhhHHHHHHHHHHHH
Q 026640 167 YILSTNFSGATCSYCLTSALLSFSLFF 193 (235)
Q Consensus 167 ~i~~~~vI~alCpyC~~s~vvti~lf~ 193 (235)
|+|.. .--+-|+.|+..-..-..+..
T Consensus 18 ~~q~~-~gl~PC~LCi~QR~~~~~i~~ 43 (149)
T d2hi7b1 18 WFQHV-MLLKPCVLCIYERVALFGVLG 43 (149)
T ss_dssp HHHTT-SCCCCCSHHHHHHHHHHTTTH
T ss_pred HHHHH-cCCCCcHHHHHHHHHHHHHHH
Confidence 66654 345899999987665544333
No 4
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=17.43 E-value=45 Score=18.54 Aligned_cols=12 Identities=42% Similarity=0.755 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHH
Q 026640 71 GVGFLETTYLSY 82 (235)
Q Consensus 71 ~iGl~~S~YLt~ 82 (235)
..|+.+++|+.|
T Consensus 18 l~Glfv~AylQY 29 (30)
T d1q90g_ 18 IAGLFVTAYLQY 29 (30)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 479999999987
No 5
>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.33 E-value=21 Score=19.88 Aligned_cols=15 Identities=20% Similarity=0.656 Sum_probs=12.2
Q ss_pred CCCCCCCCccccccccc
Q 026640 91 FCPIGGASCGDVLNSDY 107 (235)
Q Consensus 91 ~Cdin~vsC~~Vl~S~y 107 (235)
.||+. +|+++++++|
T Consensus 2 ~cdf~--gc~kifsnrq 16 (30)
T d2dlka1 2 PCDFP--GCGRIFSNRQ 16 (30)
T ss_dssp ECSST--TTCCEESSHH
T ss_pred CCCCC--CchhhhccHH
Confidence 48876 6999998876
No 6
>d1cola_ f.1.1.1 (A:) Colicin A {Escherichia coli [TaxId: 562]}
Probab=13.36 E-value=64 Score=25.39 Aligned_cols=27 Identities=41% Similarity=0.625 Sum_probs=19.5
Q ss_pred cchhccCCchhHHHHHHHHHHHHHHHH
Q 026640 106 DYAVVFGVPLPFIGMFAYGLVAVLGLL 132 (235)
Q Consensus 106 ~yA~vfGiPnallGl~~Y~~vl~l~l~ 132 (235)
-++..+|+|...+|+++|.++.+++-+
T Consensus 156 ~~~~~~g~~~~~iGI~g~li~~~v~al 182 (197)
T d1cola_ 156 AYALSLGVPAIAVGIAGILLAAVVGAL 182 (197)
T ss_dssp HHHHHCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccccccHHHHHHHHHHHHHHHH
Confidence 455567999999999999555555543
No 7
>d1vkea_ a.152.1.2 (A:) Hypothetical protein TM1620 {Thermotoga maritima [TaxId: 2336]}
Probab=10.90 E-value=1.4e+02 Score=20.64 Aligned_cols=33 Identities=27% Similarity=0.394 Sum_probs=25.3
Q ss_pred cchhhHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Q 026640 177 TCSYCLTSALLSFSLFFISLKEFSVEEIQKVLGVQLCI 214 (235)
Q Consensus 177 lCpyC~~s~vvti~lf~~tl~~~~~~~~~~~~~~~~~~ 214 (235)
-|.||+-.|+-...-. |...+++.+........
T Consensus 55 ~c~~c~~~H~~~A~~~-----G~t~eEI~Eal~va~~~ 87 (118)
T d1vkea_ 55 RCDDCIRYHLVRCVQE-----GASDEEIFEALDIALVV 87 (118)
T ss_dssp TCHHHHHHHHHHHHHT-----TCCHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHc-----CCCHHHHHHHHHHHHHH
Confidence 5999999998776544 88888888877666544
No 8
>d2ouwa1 a.152.1.4 (A:1-134) Hypothetical protein Rru_A0301 {Rhodospirillum rubrum [TaxId: 1085]}
Probab=10.89 E-value=88 Score=21.71 Aligned_cols=29 Identities=28% Similarity=0.473 Sum_probs=21.1
Q ss_pred CCcchhhHHHHHHHHHHHHHHhcccchHHHHHHH
Q 026640 175 GATCSYCLTSALLSFSLFFISLKEFSVEEIQKVL 208 (235)
Q Consensus 175 ~alCpyC~~s~vvti~lf~~tl~~~~~~~~~~~~ 208 (235)
..-|.||+..|....- -.|...+++.+..
T Consensus 80 ~n~C~YC~~~H~~~a~-----~~G~s~e~I~e~~ 108 (134)
T d2ouwa1 80 ANSCSYCAHSHTAAAR-----AKGMTPAQHAEVL 108 (134)
T ss_dssp HTTCHHHHHHHHHHHH-----HTTCCHHHHHHHH
T ss_pred HcCChHHHHHHHHHHH-----HcCCCHHHHHHHH
Confidence 3479999999986543 3477778877654
No 9
>d1wfha_ g.80.1.1 (A:) Zinc finger A20 and AN1 domains containing protein At2g36320 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=7.05 E-value=1.5e+02 Score=19.03 Aligned_cols=27 Identities=37% Similarity=0.620 Sum_probs=19.6
Q ss_pred CCCCCCcCCCCCCCCCC-----Cccccccccc
Q 026640 7 GGSGISSISSLPSLPHR-----TRLSVLPVKC 33 (235)
Q Consensus 7 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 33 (235)
|+|+-++-++-..-|.| +++-+++++|
T Consensus 1 g~s~~~~~~~~~~k~~RC~~C~KKl~l~~~~C 32 (64)
T d1wfha_ 1 GSSGSSGQPSPPQRPNRCTVCRKRVGLTGFMC 32 (64)
T ss_dssp CCCCCSSCCCCCSSCCCCTTTCCCCCTTCEEC
T ss_pred CCCccCCCCCCCCCCCcChhhCCCccceeeec
Confidence 56777777777777777 7777777775
No 10
>d2o4da1 a.152.1.3 (A:2-145) Hypothetical protein PA0269 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=6.53 E-value=81 Score=22.11 Aligned_cols=14 Identities=21% Similarity=0.586 Sum_probs=11.5
Q ss_pred CcchhhHHHHHHHH
Q 026640 176 ATCSYCLTSALLSF 189 (235)
Q Consensus 176 alCpyC~~s~vvti 189 (235)
.-|.||+..|.-..
T Consensus 45 n~C~YC~~~H~~~a 58 (144)
T d2o4da1 45 NGCAYCVNMHANDA 58 (144)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCChHHHHhHHHHH
Confidence 47999999998654
Done!