Query 026641
Match_columns 235
No_of_seqs 61 out of 63
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 18:30:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026641.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026641hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d5va_ a.4.5.14 (A:) Adipocyt 24.5 17 0.0012 25.7 2.0 18 172-189 20-37 (94)
2 d2nqwa1 d.145.1.4 (A:4-90) Hyp 14.0 35 0.0025 22.7 1.6 26 164-189 2-29 (87)
3 d2cyua1 a.9.1.1 (A:2-40) E3-bi 13.5 37 0.0027 20.5 1.4 23 164-186 15-37 (39)
4 d1w85i_ a.9.1.1 (I:) E3/E1 bin 11.8 48 0.0035 20.3 1.6 21 166-186 20-40 (42)
5 d2o3ga1 d.145.1.4 (A:180-255) 11.4 31 0.0023 22.6 0.6 17 173-189 5-21 (76)
6 d2rk5a1 d.145.1.4 (A:5-88) Put 11.2 39 0.0029 22.1 1.1 17 173-189 10-26 (84)
7 d2p13a1 d.145.1.4 (A:431-515) 10.9 41 0.003 22.3 1.1 17 173-189 15-31 (85)
8 d2c6ya1 a.4.5.14 (A:1-98) Inte 10.0 54 0.0039 23.1 1.6 19 171-189 18-36 (98)
9 d1uqra_ c.23.13.1 (A:) Type II 9.7 50 0.0036 24.9 1.3 16 173-188 22-37 (146)
10 d2o1ra1 d.145.1.4 (A:1-78) Hyp 9.6 49 0.0036 21.5 1.1 17 173-189 10-26 (78)
No 1
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.48 E-value=17 Score=25.73 Aligned_cols=18 Identities=33% Similarity=0.266 Sum_probs=15.0
Q ss_pred CccCCcchHhHHhhhcCC
Q 026641 172 GVHGDITLKDINQRIHSP 189 (235)
Q Consensus 172 g~~GdvTL~DIN~rIl~p 189 (235)
.-+|.+||+||.+.|...
T Consensus 20 sp~~~ltL~eIY~~i~~~ 37 (94)
T d1d5va_ 20 APEKKITLNGIYQFIMDR 37 (94)
T ss_dssp CSSSSBCHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHH
Confidence 457889999999999755
No 2
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=14.00 E-value=35 Score=22.67 Aligned_cols=26 Identities=23% Similarity=0.484 Sum_probs=19.6
Q ss_pred eeeeeccC--CccCCcchHhHHhhhcCC
Q 026641 164 PFAFIKPC--GVHGDITLKDINQRIHSP 189 (235)
Q Consensus 164 PF~lvKP~--g~~GdvTL~DIN~rIl~p 189 (235)
||..+-.+ -++|.++|.|+|+.+-..
T Consensus 2 p~~ki~d~~~~v~G~~~l~dl~~~l~~~ 29 (87)
T d2nqwa1 2 PFKVLGDGSYLFEGKTSLSDVRHYLDLP 29 (87)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTCC
T ss_pred CeEEECCCEEEEEEeCCHHHHHHHhCCC
Confidence 55555555 468999999999998654
No 3
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=13.54 E-value=37 Score=20.49 Aligned_cols=23 Identities=30% Similarity=0.489 Sum_probs=18.5
Q ss_pred eeeeeccCCccCCcchHhHHhhh
Q 026641 164 PFAFIKPCGVHGDITLKDINQRI 186 (235)
Q Consensus 164 PF~lvKP~g~~GdvTL~DIN~rI 186 (235)
-.+.|++.|.+|-||-.||=+-|
T Consensus 15 dl~~i~GtG~~GRI~k~Dv~~~i 37 (39)
T d2cyua1 15 DASAIKGTGVGGRLTREDVEKHL 37 (39)
T ss_dssp CGGGSCCCSSSSCCCHHHHHHHS
T ss_pred CHHHCcCCCCCCcEeHHHHHHHH
Confidence 34578999999999999995443
No 4
>d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=11.78 E-value=48 Score=20.33 Aligned_cols=21 Identities=19% Similarity=0.438 Sum_probs=17.8
Q ss_pred eeeccCCccCCcchHhHHhhh
Q 026641 166 AFIKPCGVHGDITLKDINQRI 186 (235)
Q Consensus 166 ~lvKP~g~~GdvTL~DIN~rI 186 (235)
+.|++.|.+|-||-.||-.-|
T Consensus 20 ~~i~GTG~~GRItk~DV~~~i 40 (42)
T d1w85i_ 20 RLVQGTGKNGRVLKEDIDAFL 40 (42)
T ss_dssp TTSCCCSGGGCCCHHHHHHHH
T ss_pred HHCccCCCCCcEeHHHHHHHh
Confidence 468999999999999996644
No 5
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=11.38 E-value=31 Score=22.56 Aligned_cols=17 Identities=18% Similarity=0.532 Sum_probs=15.0
Q ss_pred ccCCcchHhHHhhhcCC
Q 026641 173 VHGDITLKDINQRIHSP 189 (235)
Q Consensus 173 ~~GdvTL~DIN~rIl~p 189 (235)
++|.++|.|+|+.+-.+
T Consensus 5 vdG~~~i~dl~~~l~~~ 21 (76)
T d2o3ga1 5 VEGALEYVELAPQLNLP 21 (76)
T ss_dssp EETTCBHHHHTTTTTCC
T ss_pred EEcCCCHHHHHHHHCcC
Confidence 68999999999998765
No 6
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=11.24 E-value=39 Score=22.12 Aligned_cols=17 Identities=35% Similarity=0.579 Sum_probs=14.9
Q ss_pred ccCCcchHhHHhhhcCC
Q 026641 173 VHGDITLKDINQRIHSP 189 (235)
Q Consensus 173 ~~GdvTL~DIN~rIl~p 189 (235)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (84)
T d2rk5a1 10 VLGTMTLNDFNEYFETD 26 (84)
T ss_dssp EETTSBHHHHHHHHTCC
T ss_pred EEeeeEHHHHHHHhCCC
Confidence 67999999999999765
No 7
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=10.94 E-value=41 Score=22.28 Aligned_cols=17 Identities=12% Similarity=0.311 Sum_probs=14.8
Q ss_pred ccCCcchHhHHhhhcCC
Q 026641 173 VHGDITLKDINQRIHSP 189 (235)
Q Consensus 173 ~~GdvTL~DIN~rIl~p 189 (235)
++|.++|.|+|+.+-..
T Consensus 15 v~G~~~l~dl~~~l~~~ 31 (85)
T d2p13a1 15 MDGWISIRKASNLLEHD 31 (85)
T ss_dssp EETTSBHHHHHHHHTSC
T ss_pred EEecCCHHHHHHHHCCC
Confidence 68999999999998654
No 8
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.05 E-value=54 Score=23.07 Aligned_cols=19 Identities=21% Similarity=0.253 Sum_probs=15.4
Q ss_pred CCccCCcchHhHHhhhcCC
Q 026641 171 CGVHGDITLKDINQRIHSP 189 (235)
Q Consensus 171 ~g~~GdvTL~DIN~rIl~p 189 (235)
...+|.+||+||.+.|...
T Consensus 18 ~sp~~~ltL~eIy~~i~~~ 36 (98)
T d2c6ya1 18 MAPDKQLTLNGIYTHITKN 36 (98)
T ss_dssp TSTTSCEEHHHHHHHHHHH
T ss_pred hCCCCCccHHHHHHHHHHh
Confidence 3467889999999999754
No 9
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=9.71 E-value=50 Score=24.95 Aligned_cols=16 Identities=38% Similarity=0.621 Sum_probs=13.5
Q ss_pred ccCCcchHhHHhhhcC
Q 026641 173 VHGDITLKDINQRIHS 188 (235)
Q Consensus 173 ~~GdvTL~DIN~rIl~ 188 (235)
.-|.+||.|||+.+..
T Consensus 22 iYG~~TL~~i~~~~~~ 37 (146)
T d1uqra_ 22 IYGSQTLSDIEQHLQQ 37 (146)
T ss_dssp GTTCCCHHHHHHHHHH
T ss_pred cCCccCHHHHHHHHHH
Confidence 5688999999999854
No 10
>d2o1ra1 d.145.1.4 (A:1-78) Hypothetical protein HI0107 {Haemophilus influenzae [TaxId: 727]}
Probab=9.57 E-value=49 Score=21.55 Aligned_cols=17 Identities=24% Similarity=0.520 Sum_probs=14.9
Q ss_pred ccCCcchHhHHhhhcCC
Q 026641 173 VHGDITLKDINQRIHSP 189 (235)
Q Consensus 173 ~~GdvTL~DIN~rIl~p 189 (235)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (78)
T d2o1ra1 10 IDGSANLRDLNKMFNWE 26 (78)
T ss_dssp EETTCBHHHHHHHHCCC
T ss_pred EEeeCCHHHHHHHHCCC
Confidence 57999999999998765
Done!