BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026642
(235 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224081264|ref|XP_002306358.1| predicted protein [Populus trichocarpa]
gi|222855807|gb|EEE93354.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/177 (59%), Positives = 132/177 (74%), Gaps = 2/177 (1%)
Query: 61 SHIAKIPRSSLSPEN-KIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRA-SEN 118
S +I SSLS N K L EK ++ L G+ IF+GSFG N R S+ALP + S N
Sbjct: 10 SPFPQILTSSLSKTNYKFTNFLSEKVLVSLVGAFIFIGSFGLNTRQSLALPAQTTGPSVN 69
Query: 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP 178
L+EKRDA M KSE EEMFEK+LE EPRNVEALKVV+ G MRRG+ KEA+++V+RLIDIEP
Sbjct: 70 LEEKRDAHMEKSEDEEMFEKVLEMEPRNVEALKVVVHGKMRRGQTKEAVKYVERLIDIEP 129
Query: 179 NEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSLF 235
+VEW+LL+ALCYE+MG+LS AK LFK+IL ERPLLLRALH L + +L+ ++F
Sbjct: 130 EQVEWRLLEALCYEMMGQLSKAKTLFKEILIERPLLLRALHGLALVMHKSLEGPAVF 186
>gi|225438525|ref|XP_002275767.1| PREDICTED: uncharacterized protein LOC100254208 [Vitis vinifera]
Length = 345
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 100/167 (59%), Positives = 128/167 (76%), Gaps = 10/167 (5%)
Query: 64 AKIPRSSLS-------PENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKM-RA 115
++IP S+ S P+ +I K EK V+FL GSVIF+ G+ RP++ALP M R
Sbjct: 46 SRIPTSNFSRIANHLIPKEEIFKFFSEKVVVFLVGSVIFMWCLGA--RPAMALPAHMGRY 103
Query: 116 SENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID 175
S N+++KRDA +SE ++M+ K+LEK+PRNVEALKVV+ G MRRG+ KEA+E+V+RLID
Sbjct: 104 SSNVEQKRDAQDSESEHDDMYAKILEKDPRNVEALKVVLYGKMRRGKTKEAVEYVERLID 163
Query: 176 IEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
IEP+EVEW+LLQAL YE+MG LS AKRLFK+ILKERPLLLRALH L
Sbjct: 164 IEPDEVEWRLLQALSYEIMGHLSKAKRLFKEILKERPLLLRALHGLA 210
>gi|224093902|ref|XP_002310040.1| predicted protein [Populus trichocarpa]
gi|222852943|gb|EEE90490.1| predicted protein [Populus trichocarpa]
Length = 345
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 150/243 (61%), Gaps = 27/243 (11%)
Query: 1 MSSIKTFSLHLHSNYDRPVLPDPNKSSFLSSPNKQKHHTL-----SFQQTQKQKFHSLFI 55
M SIKTFS P P + + SS N +L S H L I
Sbjct: 1 MGSIKTFS---------PCSPPSHFQNLKSSKNCNSSTSLKPLLCSMNPLNIHSRHKLHI 51
Query: 56 TN--LSQSHIAKIPRSSLSPENK-IMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGK 112
++ S+S +IP SS+S +N L EK ++ L G+ IF+GSFG N R S+ALP +
Sbjct: 52 SSNICSKSPFPQIPTSSISKKNNNFTSFLSEKVLVSLVGAFIFIGSFGLNTRQSLALPAQ 111
Query: 113 MRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKR 172
+A M KSE EEM+EK+LEKEPRNVEALKVV+ G MRRG+ KEA+++V R
Sbjct: 112 T----------NAQMEKSEDEEMYEKVLEKEPRNVEALKVVLHGKMRRGQTKEAVKYVGR 161
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232
LI+IEP EVEW+LL+ALCYE+MG+L+ AKRLF +IL+ERPLLLRALH L + L+
Sbjct: 162 LIEIEPEEVEWRLLEALCYEMMGQLNKAKRLFNEILEERPLLLRALHGLALVMHKNLEGP 221
Query: 233 SLF 235
++F
Sbjct: 222 AVF 224
>gi|255578809|ref|XP_002530261.1| conserved hypothetical protein [Ricinus communis]
gi|223530227|gb|EEF32131.1| conserved hypothetical protein [Ricinus communis]
Length = 352
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/229 (47%), Positives = 149/229 (65%), Gaps = 12/229 (5%)
Query: 14 NYDRPVLPDP------NKSSFLSSPN-KQKHHTLSFQQTQKQKFHSLFITNLSQSHIAKI 66
NY P L P ++ +++P+ +Q L F +T K S + LS S I I
Sbjct: 8 NYHNPKLTSPYLSITPKRNLSITNPHYRQSLLKLPFHRTTKLLRIS---SKLSLSPIPHI 64
Query: 67 PRSSLSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDAL 126
P S+ S VL +K +I + G+ IF+GSFG N RPS+ALP + S +E RD
Sbjct: 65 PTSNSSKRKGFANVLCDKVLISVLGAFIFMGSFGFNARPSLALPAQ--ESAYTEEMRDTQ 122
Query: 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLL 186
M +E EEM+EK LEKEPRN+EALKVV+ G +R+G+ KEAL++V+RLI EP+EVEW+LL
Sbjct: 123 MKNNEDEEMYEKFLEKEPRNMEALKVVVYGKIRKGKTKEALKYVERLIKTEPDEVEWRLL 182
Query: 187 QALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSLF 235
+ALC+E+MG+LS AKRLFK+IL+ERPLLLRALH L + + ++F
Sbjct: 183 EALCWEMMGQLSKAKRLFKEILEERPLLLRALHGLAMVMHKNFEGPAVF 231
>gi|296082522|emb|CBI21527.3| unnamed protein product [Vitis vinifera]
Length = 252
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 99/117 (84%), Gaps = 1/117 (0%)
Query: 107 VALPGKM-RASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKE 165
+ALP M R S N+++KRDA +SE ++M+ K+LEK+PRNVEALKVV+ G MRRG+ KE
Sbjct: 1 MALPAHMGRYSSNVEQKRDAQDSESEHDDMYAKILEKDPRNVEALKVVLYGKMRRGKTKE 60
Query: 166 ALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
A+E+V+RLIDIEP+EVEW+LLQAL YE+MG LS AKRLFK+ILKERPLLLRALH L
Sbjct: 61 AVEYVERLIDIEPDEVEWRLLQALSYEIMGHLSKAKRLFKEILKERPLLLRALHGLA 117
>gi|449515817|ref|XP_004164944.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101230878 [Cucumis sativus]
Length = 362
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 131/208 (62%), Gaps = 13/208 (6%)
Query: 35 QKHHTLSFQQ---TQKQKFHSLF----ITNLSQSHIAKIPRSSLSPENKIMKVLKEKAVI 87
QK++ LS Q + + FHS +NLS+S I R SP+ KI K EK V
Sbjct: 40 QKNYKLSSQSLFCSHAKIFHSPIHNTPFSNLSESDI----RRFNSPQIKISKYFIEKFVG 95
Query: 88 FLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNV 147
FL GS IF+G F N+R ALP + + ++ + + E M+E++LE +P NV
Sbjct: 96 FLVGSFIFMGCF--NVRYVRALPAQTSNKNPILAEKAQVPEEDSEEVMWERILEHDPSNV 153
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
+ LK V+ G MR G+ + A+++VKRLID+EP+EVEW++L ALCYE++G+L TAKRLF +I
Sbjct: 154 DTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELGTAKRLFMEI 213
Query: 208 LKERPLLLRALHDLGRYVSMTLQIQSLF 235
LK++PLL+RALH L + + +S+F
Sbjct: 214 LKQKPLLVRALHGLALVMHKNNEGESVF 241
>gi|449448428|ref|XP_004141968.1| PREDICTED: uncharacterized protein LOC101208394 [Cucumis sativus]
Length = 362
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 131/208 (62%), Gaps = 13/208 (6%)
Query: 35 QKHHTLSFQQ---TQKQKFHSLF----ITNLSQSHIAKIPRSSLSPENKIMKVLKEKAVI 87
QK++ LS Q + + FHS +NLS+S I R SP+ KI K EK V
Sbjct: 40 QKNYKLSSQSLFCSHAKIFHSPIHNTPFSNLSESDI----RRFNSPQIKISKYFIEKFVG 95
Query: 88 FLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNV 147
FL GS IF+G F N+R ALP + + ++ + + E M+E++LE +P NV
Sbjct: 96 FLVGSFIFMGCF--NVRYVRALPAQTSNKNPILAEKAQVPEEDSEEVMWERILEHDPSNV 153
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
+ LK V+ G MR G+ + A+++VKRLID+EP+EVEW++L ALCYE++G+L TAKRLF +I
Sbjct: 154 DTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELGTAKRLFMEI 213
Query: 208 LKERPLLLRALHDLGRYVSMTLQIQSLF 235
LK++PLL+RALH L + + +S+F
Sbjct: 214 LKQKPLLVRALHGLALVMHKNNEGESVF 241
>gi|297802046|ref|XP_002868907.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314743|gb|EFH45166.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 340
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 116/169 (68%), Gaps = 13/169 (7%)
Query: 54 FITNLSQSHIAKIPRSSLSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKM 113
F + SQ + + S LS ++ +++L KA I L GS +FLG S +P++ALP
Sbjct: 52 FAPSFSQLPLIRSSTSLLSSKD-FVQILARKAAILLVGSFVFLGFCSS--KPALALPTAT 108
Query: 114 RASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRL 173
S+ + E E+MFEKLLE EP N+EA+K V+ MRRG+N++A+++V++L
Sbjct: 109 VVSQ----------AELEDEKMFEKLLESEPENMEAMKAVVYKKMRRGKNEDAVKYVEKL 158
Query: 174 IDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +EP+EVEWKLL+ALCYE MG+LS AKRL+KDILKE+PLL+RALH L
Sbjct: 159 MKLEPHEVEWKLLEALCYETMGQLSKAKRLYKDILKEQPLLIRALHGLA 207
>gi|18420460|ref|NP_568061.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|15215656|gb|AAK91373.1| AT4g39470/F23K16_100 [Arabidopsis thaliana]
gi|28416459|gb|AAO42760.1| At4g39470/F23K16_100 [Arabidopsis thaliana]
gi|332661676|gb|AEE87076.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 341
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 108/154 (70%), Gaps = 12/154 (7%)
Query: 69 SSLSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMG 128
+SL +++L KA I L GS +FLG S +P++ALP S+
Sbjct: 67 TSLLSSKDFVQMLARKAAILLVGSFVFLGFCSS--KPALALPTATVVSQ----------A 114
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+ E E+MFEKLLE EP N+EA+K V+ MRRG+N++A+++V++L+ +EP+EVEWKLL+A
Sbjct: 115 ELEDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEA 174
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
LCYE MG+LS AKRL+KDILKE+PLL+RALH L
Sbjct: 175 LCYETMGELSKAKRLYKDILKEQPLLIRALHGLA 208
>gi|5042163|emb|CAB44682.1| putative protein [Arabidopsis thaliana]
gi|7270931|emb|CAB80610.1| putative protein [Arabidopsis thaliana]
Length = 290
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 108/154 (70%), Gaps = 12/154 (7%)
Query: 69 SSLSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMG 128
+SL +++L KA I L GS +FLG S +P++ALP S+
Sbjct: 67 TSLLSSKDFVQMLARKAAILLVGSFVFLGFCSS--KPALALPTATVVSQ----------A 114
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+ E E+MFEKLLE EP N+EA+K V+ MRRG+N++A+++V++L+ +EP+EVEWKLL+A
Sbjct: 115 ELEDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEA 174
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
LCYE MG+LS AKRL+KDILKE+PLL+RALH L
Sbjct: 175 LCYETMGELSKAKRLYKDILKEQPLLIRALHGLA 208
>gi|356516307|ref|XP_003526837.1| PREDICTED: uncharacterized protein LOC100798720 [Glycine max]
Length = 356
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/232 (42%), Positives = 137/232 (59%), Gaps = 24/232 (10%)
Query: 2 SSIKTFSLHLHSNYDRPVLPDPNKSSFLSSP---NKQKHHTLSFQQTQKQKFHSLFITNL 58
+SI T S++ HS P + L P + K +++F+ + +LF T L
Sbjct: 4 TSITTLSIYSHS--------QPKFLNLLQHPLIHTRNKSTSITFKPAIVRA--TLFST-L 52
Query: 59 SQSHIAKIPRSSLSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASEN 118
+ SH P S+L P + K L EK FL GS + G F RP+ A S
Sbjct: 53 TCSHTPSTPSSNLPPGRALTKFLSEKVAFFLIGSFLLSGCFSK--RPAFAETAPSVGSGA 110
Query: 119 LKEKR--------DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFV 170
+ E++ + + EVEEM+E +LEK+P+NVEALKVV+ G +RRG++KEA++ V
Sbjct: 111 VLEEKMNPTEEKNEEEKSEEEVEEMWEGILEKDPKNVEALKVVLYGKIRRGKSKEAVKVV 170
Query: 171 KRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ LI EPNEVEW+LL ALCYE MG+LS AKRLF++ILK+RPLL+RALH L
Sbjct: 171 EDLIAAEPNEVEWRLLLALCYETMGQLSKAKRLFREILKKRPLLVRALHGLA 222
>gi|357464439|ref|XP_003602501.1| hypothetical protein MTR_3g095070 [Medicago truncatula]
gi|355491549|gb|AES72752.1| hypothetical protein MTR_3g095070 [Medicago truncatula]
Length = 333
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 124/222 (55%), Gaps = 23/222 (10%)
Query: 1 MSSIKTFSLHLHSNYDRPVLPDPNKSSFLSSPNKQKHHTLSFQQTQKQKFHSLFITNLSQ 60
M+S T +L + S + +P LP+ S L + + LS Q KF + ++ +
Sbjct: 1 MASTATTTLFISSEF-KPNLPN----SLLLPRIRICNKPLSIS-LQPSKFRATHLSLCNC 54
Query: 61 SHIAKIPRSSLSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLK 120
S P + SP+ + + +K FL GS IF+ F +V++P
Sbjct: 55 SRTPLTPSTIFSPQTTLTNFISQKISFFLIGSFIFVACFSRKPAFAVSVPS--------- 105
Query: 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
+ +E+ E EK+LEK+ RNVEALKV++ G +RRG+ KEA +FVKRLID EPNE
Sbjct: 106 ------VDSAEILE--EKILEKDSRNVEALKVIVYGKIRRGKCKEAEKFVKRLIDEEPNE 157
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
VEW+LL ALCYE MG LS AK L+ +IL+ PL +RALH L
Sbjct: 158 VEWRLLLALCYETMGYLSKAKGLYLEILENWPLFVRALHGLA 199
>gi|356509026|ref|XP_003523253.1| PREDICTED: uncharacterized protein LOC100795327 [Glycine max]
Length = 356
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 104/150 (69%), Gaps = 6/150 (4%)
Query: 79 KVLKEKAVIFLAGSVIFLGSFG-----SNLRPSVALPGKMRASEN-LKEKRDALMGKSEV 132
K L EK FL GS + G F + PSV + + N +EK + + EV
Sbjct: 73 KFLSEKVAFFLIGSFLLSGCFSKRSAFAEAAPSVGSGAVLEQNMNPTEEKNEEEKSEEEV 132
Query: 133 EEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYE 192
EEM+E +LEK+P+NVEALKVV+ G +R+G++KEA++FV+ LI EPNEVEW+LL ALCYE
Sbjct: 133 EEMWESILEKDPKNVEALKVVLYGKIRKGKSKEAVKFVEDLIAAEPNEVEWRLLLALCYE 192
Query: 193 LMGKLSTAKRLFKDILKERPLLLRALHDLG 222
MG+LS AK+LF++ILK+RPLL+RALH L
Sbjct: 193 TMGQLSKAKKLFREILKKRPLLVRALHGLA 222
>gi|388508206|gb|AFK42169.1| unknown [Lotus japonicus]
Length = 215
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 97/170 (57%), Gaps = 10/170 (5%)
Query: 33 NKQKHHTLSFQQTQKQKFHSLFITNLSQSHIAKIPRSSLSPENKIMKVLKEKAVIFLAGS 92
++ KH ++S Q + T L + IP S P+ + K L +K L GS
Sbjct: 33 SRNKHTSISLQPATIRP------TLLPLCTFSGIPTSRFRPQTSLPKFLSQKIASLLIGS 86
Query: 93 VIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLE-KEPRNVEALK 151
IF G L + A S ++EK +A+ GKSE EE + L K+ RNVEALK
Sbjct: 87 FIFF--MGCCLSKNTAFAVAAVPSV-MEEKMEAMEGKSEEEEEMYEKLLEKDSRNVEALK 143
Query: 152 VVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201
V++ G +RRG+ EA++FV+ LID+EPNEVEWKLL ALCYE MG+LS K
Sbjct: 144 VIVYGKIRRGKCNEAVKFVESLIDLEPNEVEWKLLLALCYETMGELSKLK 193
>gi|115462437|ref|NP_001054818.1| Os05g0182100 [Oryza sativa Japonica Group]
gi|57900694|gb|AAW57819.1| unknow protein [Oryza sativa Japonica Group]
gi|113578369|dbj|BAF16732.1| Os05g0182100 [Oryza sativa Japonica Group]
gi|215678653|dbj|BAG92308.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741017|dbj|BAG97512.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 396
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 63/89 (70%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+M+ ++L ++P +V+ALK + MRR AL F +RL + EP EVEW+L++AL +EL
Sbjct: 174 QMYMEILSRDPGDVDALKCALFAKMRRAEWGGALGFARRLREAEPGEVEWRLMEALLHEL 233
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLG 222
G L+ A+RLF ++L E+PLL+RALH L
Sbjct: 234 KGDLAEAERLFNEVLAEKPLLVRALHGLA 262
>gi|326505492|dbj|BAJ95417.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522963|dbj|BAJ88527.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 390
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 71/102 (69%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+M+ ++L ++P +V+ALK V+ MRR AL + +L + EP EVEW+L++AL +EL
Sbjct: 168 QMYLEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEWRLMEALLHEL 227
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSLF 235
G ++TA+RLF+++L E+PLL+RALH L + L+ ++F
Sbjct: 228 KGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLEGPTVF 269
>gi|222630429|gb|EEE62561.1| hypothetical protein OsJ_17360 [Oryza sativa Japonica Group]
Length = 407
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 62/86 (72%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+M+ ++L ++P +V+ALK + MRR AL F +RL + EP EVEW+L++AL +EL
Sbjct: 170 QMYMEILSRDPGDVDALKCALFAKMRRAEWGGALGFARRLREAEPGEVEWRLMEALLHEL 229
Query: 194 MGKLSTAKRLFKDILKERPLLLRALH 219
G L+ A+RLF ++L E+PLL+RALH
Sbjct: 230 KGDLAEAERLFNEVLAEKPLLVRALH 255
>gi|326492734|dbj|BAJ90223.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 71/102 (69%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+M+ ++L ++P +V+ALK V+ MRR AL + +L + EP EVEW+L++AL +EL
Sbjct: 164 QMYLEVLSEDPGDVDALKCVLFARMRRKDWGGALRYAAQLREAEPGEVEWRLMEALLHEL 223
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSLF 235
G ++TA+RLF+++L E+PLL+RALH L + L+ ++F
Sbjct: 224 KGDIATAERLFQEVLAEKPLLVRALHGLALCMHKRLEGPTVF 265
>gi|218196211|gb|EEC78638.1| hypothetical protein OsI_18722 [Oryza sativa Indica Group]
Length = 396
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 62/89 (69%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+M+ ++L ++P +V+ALK + MRR AL F +RL + EP EVEW+ ++AL +EL
Sbjct: 174 QMYMEILSRDPGDVDALKCALFAKMRRAEWGGALGFARRLREAEPGEVEWRFMEALLHEL 233
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLG 222
G L+ A+RLF ++L E+PLL+RALH L
Sbjct: 234 KGDLAEAERLFNEVLAEKPLLVRALHGLA 262
>gi|357134392|ref|XP_003568801.1| PREDICTED: uncharacterized protein LOC100837872 [Brachypodium
distachyon]
Length = 386
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 68/102 (66%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+M+ ++L +P +V ALK ++ MRR AL + +L + +P EVEW+L++AL +EL
Sbjct: 164 QMYLEVLSTDPGDVSALKCLLFARMRRKDWAGALRYAAQLREADPGEVEWRLMEALLHEL 223
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSLF 235
G L+ A+RLF+++L E+PLL+RALH L + L+ ++F
Sbjct: 224 KGDLAEAERLFQEVLAEKPLLVRALHGLALCMHKRLEGPTVF 265
>gi|195632068|gb|ACG36692.1| hypothetical protein [Zea mays]
Length = 369
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 56/88 (63%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
M+ +L + +V+ALK + MRR AL + +RL D EP+E+EW+L+ A +EL
Sbjct: 148 MYSAILSRNSGDVDALKCALYAKMRRADWGGALRYARRLRDAEPSELEWRLMVAQLHELK 207
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLG 222
G L+ A+R F+++L E PL +RALH L
Sbjct: 208 GDLAEAERHFRELLAEEPLFVRALHGLA 235
>gi|212722684|ref|NP_001131681.1| uncharacterized protein LOC100193041 [Zea mays]
gi|194692232|gb|ACF80200.1| unknown [Zea mays]
gi|413944649|gb|AFW77298.1| hypothetical protein ZEAMMB73_253433 [Zea mays]
Length = 371
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
M+ +L + +V+ALK + MRR AL F + L D EP+E+EW+L+ A +EL
Sbjct: 150 MYSAILSRNSGDVDALKCALYAKMRRADWGGALRFARLLRDAEPSELEWRLMVAQLHELK 209
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLG 222
G L+ A+R F+++L E PLL+RALH L
Sbjct: 210 GDLAEAERHFRELLAEEPLLVRALHGLA 237
>gi|224088575|ref|XP_002308480.1| predicted protein [Populus trichocarpa]
gi|222854456|gb|EEE92003.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 90 AGSVIFLGSFGSNLRPSVALPGKMRAS--ENLKEKRDALMGKSEVEEMFEKLLEKEPRNV 147
A +V+F F S +P++A P +S + KE + E E + L + P +V
Sbjct: 73 AAAVLFFTRFNS--KPAIASPVAASSSTADPTKESSKENVSFEEQERALQDHLAQNPSDV 130
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
EAL+ +M+ ++ + +EA+E V RLI++EPNE EW LL++ Y G +AK F+ +
Sbjct: 131 EALRSLMEVRIKSKKLQEAIEVVDRLIELEPNEDEWPLLKSQIYTYSGDFESAKDGFEAV 190
Query: 208 LKERPLLLRALHDL 221
L++ PL + A H L
Sbjct: 191 LQKDPLRVEAYHGL 204
>gi|242087117|ref|XP_002439391.1| hypothetical protein SORBIDRAFT_09g005640 [Sorghum bicolor]
gi|241944676|gb|EES17821.1| hypothetical protein SORBIDRAFT_09g005640 [Sorghum bicolor]
Length = 345
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 62/101 (61%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
M+ +L + P +V+ALK + MRR AL + +RL D EP+EVEW+L+ A EL
Sbjct: 124 MYSAILSRSPGDVDALKGALYAKMRRADWGGALRYARRLRDAEPSEVEWRLMVAQLNELK 183
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSLF 235
G L+ A+ F+++L + PLL++ALH L + L+ ++F
Sbjct: 184 GDLAEAECQFRELLAQEPLLVQALHGLALCMQKKLEGPTVF 224
>gi|297827245|ref|XP_002881505.1| hypothetical protein ARALYDRAFT_482732 [Arabidopsis lyrata subsp.
lyrata]
gi|297327344|gb|EFH57764.1| hypothetical protein ARALYDRAFT_482732 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 16/214 (7%)
Query: 9 LHLHSNYDRPVLPDPNKSSFLSSPNKQKHHTLSFQQTQKQKFHSLFITNLSQSHIAKIPR 68
LHLH PN SF H + SF +T + S I
Sbjct: 7 LHLHQQ--------PNHLSF-------THFSSSFPKTPSSFSLRSLPKSTSSLKCVSIKA 51
Query: 69 SSLSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRAS-ENLKEKRDALM 127
SS ++ + LK V F A + +FL + P++A P S E+LK+ + +
Sbjct: 52 SSSKSQDSRLSFLKSTCVTFTAAAALFLVNLQLKPSPAIAAPVAATPSVESLKQSNNGDV 111
Query: 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187
E E E L P +VEAL+ +M+ ++ + EA+E + RLI++EP E EW +L+
Sbjct: 112 SLEEEERSLEDHLASHPEDVEALRSLMEVRIKSRKLIEAIELIDRLIELEPEEKEWPILK 171
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
A + G L +AK F++IL + PL + A H L
Sbjct: 172 ANIFSYSGDLESAKTGFEEILVKDPLRVDAYHGL 205
>gi|224138502|ref|XP_002322830.1| predicted protein [Populus trichocarpa]
gi|222867460|gb|EEF04591.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 80 VLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRAS-ENLKEKRDALMGKSEVEEMFEK 138
++K ++ A + +F N++P++A P ++ + +E + E E +
Sbjct: 72 IIKITSITLTAAAALFFTRL--NIKPAIASPLTASSTVDPTEESSKENVSYEEQERALQD 129
Query: 139 LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198
L + P ++EAL+ +M+ ++ + EA+E V RLI++EPNE EW LL++ Y G
Sbjct: 130 YLSQNPNDIEALRSLMEVRIKSKKLVEAIEVVDRLIELEPNEDEWPLLKSQIYTYSGDFE 189
Query: 199 TAKRLFKDILKERPLLLRALHDL 221
+AK F+ ILK+ PL + A H L
Sbjct: 190 SAKDGFEAILKKDPLRVEAYHGL 212
>gi|297741536|emb|CBI32668.3| unnamed protein product [Vitis vinifera]
Length = 314
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 4/135 (2%)
Query: 94 IFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVV 153
+F F N++P +A P E K+ + E E E+ +E P +VE LK +
Sbjct: 63 VFFARF--NVKPVIAAPAA--TVEPFKQSTMDSVSDEEKERTVEEYVESHPDDVEGLKSL 118
Query: 154 MQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL 213
M+ ++ + +EA++ ++RLI +EP++ EW LL+A Y G+ AK F++IL PL
Sbjct: 119 MEVKIKNRKLQEAVDVIERLIQLEPDDKEWPLLKAHLYSYSGESELAKLGFEEILSANPL 178
Query: 214 LLRALHDLGRYVSMT 228
+ A H L VS +
Sbjct: 179 TVEAYHGLVMAVSQS 193
>gi|225439850|ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267054 [Vitis vinifera]
Length = 351
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 102 NLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG 161
N++P +A P E K+ + E E E+ +E P +VE LK +M+ ++
Sbjct: 100 NVKPVIAAPAA--TVEPFKQSTMDSVSDEEKERTVEEYVESHPDDVEGLKSLMEVKIKNR 157
Query: 162 RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ +EA++ ++RLI +EP++ EW LL+A Y G+ AK F++IL PL + A H L
Sbjct: 158 KLQEAVDVIERLIQLEPDDKEWPLLKAHLYSYSGESELAKLGFEEILSANPLTVEAYHGL 217
Query: 222 GRYVSMT 228
VS +
Sbjct: 218 VMAVSQS 224
>gi|21617936|gb|AAM66986.1| unknown [Arabidopsis thaliana]
Length = 333
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 78 MKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRAS---ENLKEKRDALMGKSEVEE 134
+ +LK V F A + +FL + L+PS A+ + A+ E+LK+ + + E E
Sbjct: 61 LSILKSTCVSFTAAAALFLVNL--QLKPSPAIAAPVAATPLMESLKQS-NGNVSFEEEER 117
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
E+ L P +VEAL+ +M+ ++ + EA+E + RLI++EP E EW +L+A +
Sbjct: 118 SLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYS 177
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDL 221
G L +AK F++IL + PL + A H L
Sbjct: 178 GDLESAKTGFEEILVKDPLRVEAYHGL 204
>gi|18404409|ref|NP_565860.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|4056493|gb|AAC98059.1| chloroplast lumen common protein family [Arabidopsis thaliana]
gi|114050659|gb|ABI49479.1| At2g37400 [Arabidopsis thaliana]
gi|330254299|gb|AEC09393.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 333
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 78 MKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRAS---ENLKEKRDALMGKSEVEE 134
+ +LK V F A + +FL + L+PS A+ + A+ E+LK+ + + E E
Sbjct: 61 LSILKSTCVSFTAAAALFLVNL--QLKPSPAIAAPVAATPLMESLKQS-NGNVSFEEEER 117
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
E+ L P +VEAL+ +M+ ++ + EA+E + RLI++EP E EW +L+A +
Sbjct: 118 SLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKANIFSYS 177
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDL 221
G L +AK F++IL + PL + A H L
Sbjct: 178 GDLESAKTGFEEILVKDPLRVEAYHGL 204
>gi|255584563|ref|XP_002533008.1| conserved hypothetical protein [Ricinus communis]
gi|223527219|gb|EEF29383.1| conserved hypothetical protein [Ricinus communis]
Length = 341
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 86/158 (54%), Gaps = 11/158 (6%)
Query: 72 SPENKIMK----VLKEKAVIFLAGSVIFLGSFGSNL--RPSVALP--GKMRASENLKEKR 123
+PE +++ +L+ + A + +F F +NL +P++A P A E ++
Sbjct: 55 NPEPSLLRTLNPILRTTCITLTATAALF---FFNNLHKKPAIAAPVTASPPAVEPAEQSS 111
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183
+ + E E E L + P +++ L+ +M+ ++ + +A+E V RLI++EP+E EW
Sbjct: 112 PSNVSFQEQERALEDRLARNPNDIDTLRSLMEVRIKSRKLLQAIEVVDRLIELEPDEDEW 171
Query: 184 KLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
LL++ + G +A++ F++IL++ PL + A H L
Sbjct: 172 PLLKSQIFSYSGDFESARKGFEEILEKDPLRVEAYHGL 209
>gi|449448671|ref|XP_004142089.1| PREDICTED: uncharacterized protein LOC101218852 isoform 1 [Cucumis
sativus]
gi|449448673|ref|XP_004142090.1| PREDICTED: uncharacterized protein LOC101218852 isoform 2 [Cucumis
sativus]
Length = 345
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
E D E E + E+ + +VEAL+ +++ N++ G+ EA+E + RLI++EPN+
Sbjct: 112 ESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIELEPND 171
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
E LL+A Y MG+L AK F+DIL P ++ A H L
Sbjct: 172 PELPLLKANFYSYMGELELAKNEFEDILARDPFVVEAYHGLA 213
>gi|449523355|ref|XP_004168689.1| PREDICTED: uncharacterized protein LOC101226779 isoform 1 [Cucumis
sativus]
gi|449523357|ref|XP_004168690.1| PREDICTED: uncharacterized protein LOC101226779 isoform 2 [Cucumis
sativus]
Length = 345
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%)
Query: 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
E D E E + E+ + +VEAL+ +++ N++ G+ EA+E + RLI++EPN+
Sbjct: 112 ESTDESTEYEENESVVEEKRADDSNDVEALRSLVEENVKSGKLPEAIEALNRLIELEPND 171
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
E LL+A Y MG+L AK F+DIL P ++ A H L
Sbjct: 172 PELPLLKANFYSYMGELELAKNEFEDILARDPFVVEAYHGLA 213
>gi|297834748|ref|XP_002885256.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331096|gb|EFH61515.1| tetratricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 320
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 73/135 (54%), Gaps = 2/135 (1%)
Query: 88 FLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEM--FEKLLEKEPR 145
+ A S I +G+ S LP K + E+ + + ++ E+ +LL+ P
Sbjct: 61 YFAKSAILIGAAVSMTGKFSTLPVKAESPVTTTEEAYQEVKEEKLSEIAPLSELLDSTPE 120
Query: 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205
VE L+ ++Q + +G ++EAL+ ++RL+ +P+E EWK L A MG+ A+++F+
Sbjct: 121 AVETLRSLLQQKLEKGEDEEALKLLERLVTAQPDETEWKFLMARLLGEMGRPENARQMFE 180
Query: 206 DILKERPLLLRALHD 220
+IL+ PL AL +
Sbjct: 181 EILQRNPLSFEALFE 195
>gi|359473679|ref|XP_003631345.1| PREDICTED: uncharacterized protein LOC100852583 [Vitis vinifera]
Length = 312
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 24/179 (13%)
Query: 56 TNLSQSHIAKIPRSSLSPE--------------NKIMKVLKEKA--VIFLAGSVIFLGSF 99
++LS + PR S+SP N I+K +K A ++ A +V +G F
Sbjct: 15 SSLSSNVSFAFPRPSISPSYHHRRLRVSASANNNPILKAIKTSAGTLVLTAAAVFMMGKF 74
Query: 100 GSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
ALP + + L E+ KSE + LE + ALK V+Q +
Sbjct: 75 R-------ALPARAESPMVLSEESATPEEKSEESSPLSEFLENS-EALGALKSVLQQKLE 126
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
G + EAL+ ++RL+ +P VEWK L A MG+ A+ +F++IL PL AL
Sbjct: 127 DGEDGEALKVLERLVSAQPEVVEWKFLMARLLGEMGETDRARDVFEEILASNPLSFEAL 185
>gi|18401882|ref|NP_566609.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
gi|11994105|dbj|BAB01108.1| unnamed protein product [Arabidopsis thaliana]
gi|14335158|gb|AAK59859.1| AT3g18420/MYF24_13 [Arabidopsis thaliana]
gi|18655375|gb|AAL76143.1| AT3g18420/MYF24_13 [Arabidopsis thaliana]
gi|21592430|gb|AAM64381.1| unknown [Arabidopsis thaliana]
gi|332642574|gb|AEE76095.1| tetratricopeptide repeat (TPR)-containing protein [Arabidopsis
thaliana]
Length = 316
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 84 KAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEM--FEKLLE 141
K+ I + +V G F + LP K + EK + + ++ E+ +LL+
Sbjct: 60 KSAILIGAAVSMTGKFST-------LPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLD 112
Query: 142 KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201
P VE L+ ++Q + +G ++EAL+ ++RL+ +P E EWK L A MG+ A+
Sbjct: 113 STPEAVETLRSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENAR 172
Query: 202 RLFKDILKERPLLLRALHD 220
++F++IL+ PL AL +
Sbjct: 173 QMFEEILQRNPLSFEALFE 191
>gi|147784212|emb|CAN72842.1| hypothetical protein VITISV_000983 [Vitis vinifera]
Length = 475
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 16/149 (10%)
Query: 75 NKIMKVLKEKA--VIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEV 132
N I+K +K A ++ A +V +G F ALP + + L E+ KSE
Sbjct: 211 NPILKAIKTSAGTLVLTAAAVFMMGKF-------RALPARAESPMVLSEESATPEEKSEE 263
Query: 133 EEMFEKLLEKEPRNVEAL---KVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ LE N EAL K V+Q + G + EAL+ ++R++ +P VEWK L A
Sbjct: 264 SSPLSEFLE----NSEALGXLKSVLQQKLEDGEDGEALKVLERIVSAQPEVVEWKFLMAR 319
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRAL 218
MG+ A+ +F++IL PL AL
Sbjct: 320 LLGEMGETDRARDVFEEILASNPLSFEAL 348
>gi|6729507|emb|CAB67663.1| putative protein [Arabidopsis thaliana]
Length = 388
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E ++ L P +V+AL+ +M+ ++ + EA+E + RLI +EP E EW +L+A
Sbjct: 162 EEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANI 221
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ G L AK F++IL + PL + A H L
Sbjct: 222 FTYSGDLDLAKTGFEEILAKDPLRVEAYHGL 252
>gi|297820086|ref|XP_002877926.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323764|gb|EFH54185.1| chloroplast lumen common family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 340
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 48/78 (61%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P +V+AL+ +M+ +R + EA+E + RLI +EP E EW +L+A + G L AK
Sbjct: 127 PSDVDALRSLMEVKIRSRKLSEAVEVIDRLIKLEPEEKEWPVLKANIFTYSGDLDLAKTG 186
Query: 204 FKDILKERPLLLRALHDL 221
F++IL + PL + A H L
Sbjct: 187 FEEILAKDPLRVEAYHGL 204
>gi|449463501|ref|XP_004149472.1| PREDICTED: uncharacterized protein LOC101212982 [Cucumis sativus]
gi|449526118|ref|XP_004170061.1| PREDICTED: uncharacterized LOC101212982 [Cucumis sativus]
Length = 345
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 20/150 (13%)
Query: 84 KAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEK----- 138
KA I + + +G F + LP + +S + E+ + + +FE
Sbjct: 79 KAAILIGAAATMVGKFSN-------LPARAESSAVVAEEASRVEETTSDHRIFEDSDQDG 131
Query: 139 --------LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
LE VEALK ++Q + G ++EAL+ +K+L+ P+ EWK L A
Sbjct: 132 RQSSPLNDFLESNSEAVEALKSLLQQKLENGEDEEALKILKQLVSALPSVTEWKFLMARL 191
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHD 220
MGK A+ +F++IL PL AL +
Sbjct: 192 LGEMGKTEHAREVFEEILAVNPLSFEALFE 221
>gi|18409862|ref|NP_566986.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|20466552|gb|AAM20593.1| putative protein [Arabidopsis thaliana]
gi|23198132|gb|AAN15593.1| putative protein [Arabidopsis thaliana]
gi|332645587|gb|AEE79108.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 340
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E ++ L P +V+AL+ +M+ ++ + EA+E + RLI +EP E EW +L+A
Sbjct: 114 EEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEPEEKEWPVLKANI 173
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ G L AK F++IL + PL + A H L
Sbjct: 174 FTYSGDLDLAKTGFEEILAKDPLRVEAYHGL 204
>gi|7413648|emb|CAB85996.1| putative protein [Arabidopsis thaliana]
Length = 407
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197
K L K P +VEAL+ +M+ + ALE + RLI+I+P E EW++L+A G
Sbjct: 120 KHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDF 179
Query: 198 STAKRLFKDILKERPLLLRALHDL 221
+A + F+++L + P + A H L
Sbjct: 180 DSATKGFEEVLSKDPFRVEAYHGL 203
>gi|15232691|ref|NP_187560.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|6682229|gb|AAF23281.1|AC016661_6 hypothetical protein [Arabidopsis thaliana]
gi|119360093|gb|ABL66775.1| At3g09490 [Arabidopsis thaliana]
gi|332641252|gb|AEE74773.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 334
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%)
Query: 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
KR A+ + VE EK LE + +V AL ++ + + ++++A+ F+ RLI+IEP E
Sbjct: 88 KRAAMTPVAVVETTLEKHLETQSNDVNALSLLTEIKFKSDKHEQAIVFLDRLIEIEPYER 147
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+W ++A GK +A F++IL++ P+ + A H L
Sbjct: 148 KWPAMKARILSYHGKSESAIEAFEEILEKDPIRVDAYHYL 187
>gi|255555529|ref|XP_002518801.1| conserved hypothetical protein [Ricinus communis]
gi|223542182|gb|EEF43726.1| conserved hypothetical protein [Ricinus communis]
Length = 331
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 7/140 (5%)
Query: 88 FLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALM-------GKSEVEEMFEKLL 140
+ + I +G S+ LP K S + E+ L ++ + + L
Sbjct: 67 IITKAAILIGVTASSASRFSILPAKAETSATVTEQTPTLQEEEEESQAENNQNQNLSEFL 126
Query: 141 EKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200
E +E+LK ++Q + G ++EAL+ + L++ +P EWK L A MG+ A
Sbjct: 127 ESNAEAIESLKSLLQQKLENGEDEEALKTLNHLVEAQPLVTEWKFLMARLLNEMGRTQDA 186
Query: 201 KRLFKDILKERPLLLRALHD 220
+ LF++IL+ PL AL +
Sbjct: 187 RNLFEEILQMNPLSFEALFE 206
>gi|18413971|ref|NP_568104.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|21553360|gb|AAM62453.1| unknown [Arabidopsis thaliana]
gi|332003111|gb|AED90494.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 326
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%)
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197
K L K P +VEAL+ +M+ + ALE + RLI+I+P E EW++L+A G
Sbjct: 120 KHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGDF 179
Query: 198 STAKRLFKDILKERPLLLRALHDL 221
+A + F+++L + P + A H L
Sbjct: 180 DSATKGFEEVLSKDPFRVEAYHGL 203
>gi|297806195|ref|XP_002870981.1| hypothetical protein ARALYDRAFT_487037 [Arabidopsis lyrata subsp.
lyrata]
gi|297316818|gb|EFH47240.1| hypothetical protein ARALYDRAFT_487037 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%)
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197
K L P +VEAL+ +M+ + ALE + RLI+IEP E EW++L+A G
Sbjct: 124 KHLTNNPNDVEALQSLMKIKFQTKNLDHALEILNRLIEIEPGEQEWRILKAQVQTYGGDF 183
Query: 198 STAKRLFKDILKERPLLLRALHDL 221
+A + F++IL + P + A H L
Sbjct: 184 ESATKGFEEILAKDPFRVEAYHGL 207
>gi|449440018|ref|XP_004137782.1| PREDICTED: uncharacterized protein LOC101207402 [Cucumis sativus]
gi|449530566|ref|XP_004172265.1| PREDICTED: uncharacterized LOC101207402 [Cucumis sativus]
Length = 346
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 94/185 (50%), Gaps = 17/185 (9%)
Query: 41 SFQQTQKQKFHSLFITNLSQSHIAKIPRSSL----SPENKIMKVLKEKAVIFLAGSVIFL 96
+F Q F S+F T + PRSSL P + +LK +V A + +F
Sbjct: 42 AFPSFQSSSFDSVFRT-------PQRPRSSLPLILDPISS--SILKTTSVTLTAAAALFF 92
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
F +P++A P +++KE + E E + E+ L + +VEAL+ +++
Sbjct: 93 MRFCG--KPAIAAPIPPPTVDSVKESMKDEGSRGEKETVLEEELVND--SVEALRSLIEV 148
Query: 157 NMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLR 216
++ + EA++ + RLI++EPN++EW +L+A Y +G A+ F+ IL++ P +
Sbjct: 149 KVKARKFPEAIKILDRLIELEPNDLEWLVLKANVYSHVGNSELARNEFQKILEKDPFQVE 208
Query: 217 ALHDL 221
A H L
Sbjct: 209 AYHGL 213
>gi|224108155|ref|XP_002314740.1| predicted protein [Populus trichocarpa]
gi|222863780|gb|EEF00911.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187
+S+ E LE +E+LK ++Q + +G++ EAL +K+L+ +P EWK L
Sbjct: 121 NQSDASTPLEAFLESNAEAIESLKSLLQQKLEKGQDDEALNILKQLVSAQPEVTEWKFLM 180
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHD 220
A M ++ A+ +F++IL PL AL +
Sbjct: 181 ARLLNEMRRVQDARNVFEEILVVNPLSFEALFE 213
>gi|168007300|ref|XP_001756346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692385|gb|EDQ78742.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 266
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 49/80 (61%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
L++ P +++AL+ +M +R+G +ALE V L+ + P+ W+L++A E +G L
Sbjct: 16 LKRHPEDIKALEGLMYIRLRKGSVAKALEIVDDLLALRPDHAPWQLVRAQALEFLGDLKA 75
Query: 200 AKRLFKDILKERPLLLRALH 219
A+ F+ +L++ PL RAL
Sbjct: 76 ARHAFEKVLEKDPLSARALQ 95
>gi|224101987|ref|XP_002312502.1| predicted protein [Populus trichocarpa]
gi|222852322|gb|EEE89869.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 139 LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198
LE +E+LK ++Q + G+++EAL+ +K L+ +P EWK L A G+
Sbjct: 6 FLESNAEAIESLKSLLQQKLENGQDEEALKIIKLLVSAQPEVTEWKFLMARLLNETGRAQ 65
Query: 199 TAKRLFKDILKERPLLLRALHD 220
A+ +F++IL PL AL +
Sbjct: 66 DARNVFEEILVANPLSFEALFE 87
>gi|148908023|gb|ABR17131.1| unknown [Picea sitchensis]
Length = 459
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 26/167 (15%)
Query: 81 LKEKAVIFL-AGSVIFLGSFGSNL-RPSVAL---------PGKMRASENLKEKRDALM-- 127
++E A +FL G ++ +F S L RP++A P A+++ + +
Sbjct: 133 IREAATLFLLTGFLVVFNAFNSRLCRPALACGGGPCCCPSPPATTATDSASSQTNDFTIP 192
Query: 128 ----------GKSEV---EEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLI 174
G+ +V E + + L+ P ++ +LK+++ M + + A+E + R++
Sbjct: 193 TPTTQLKEGEGEGDVDVGEALAVEYLKTHPNDMSSLKILLHNRMIKRDIQGAVETLDRMM 252
Query: 175 DIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+EP E+EWK L+A + +G + A+ ++ ILK P AL L
Sbjct: 253 LVEPYEIEWKSLKAQAHYYLGDMKEARHTYERILKFSPFSPGALQGL 299
>gi|116622726|ref|YP_824882.1| hypothetical protein Acid_3625 [Candidatus Solibacter usitatus
Ellin6076]
gi|116225888|gb|ABJ84597.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 547
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL + + E ++EK+L+ +P++++AL+ + +++ ALEF
Sbjct: 399 PAWPEAHANLALAYSGMGERDHAERLYEKMLDADPKSMDALRGLAALSIQANDYDTALEF 458
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
RLID+ E L YE G+ + RL++D L ++ + AL +LGR
Sbjct: 459 HVRLIDLGDRTPEVLYNAGLMYEKAGQQDKSVRLYRDALAQQADMPEALLNLGR 512
>gi|356525008|ref|XP_003531119.1| PREDICTED: uncharacterized protein LOC100780000 [Glycine max]
Length = 293
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
P RAS + D + E LLE + ALK ++Q + G + EAL
Sbjct: 58 FPSTARASPPPPLETDHRLNVEESLSPLSDLLETNAEALAALKSLLQQKLELGEDDEALA 117
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHD 220
+KRLI +P+ +WK L A G +A+ ++++L PL AL +
Sbjct: 118 ILKRLIAAQPDAADWKFLAARLTAETGDSDSARGYYEEVLAANPLSFEALFE 169
>gi|428777892|ref|YP_007169679.1| hypothetical protein PCC7418_3350 [Halothece sp. PCC 7418]
gi|428692171|gb|AFZ45465.1| tetratricopeptide TPR_2 [Halothece sp. PCC 7418]
Length = 286
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 51/86 (59%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+E +LEKEP N AL+ +++ +++G + AL +++L D+ P++ +++L A + +G
Sbjct: 64 YEAVLEKEPDNESALQGLIEVRIQQGDIEGALPPLEKLADLNPDQQAYRILLAQAKQQVG 123
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
L A ++ IL +P RAL L
Sbjct: 124 DLEGAADAYRTILDNQPGDPRALQGL 149
>gi|224101985|ref|XP_002312501.1| predicted protein [Populus trichocarpa]
gi|222852321|gb|EEE89868.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 6/138 (4%)
Query: 89 LAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALM------GKSEVEEMFEKLLEK 142
L + I +G S LP K L E+ AL +S+ + LE
Sbjct: 66 LTKTAILIGVAASIAGKFPVLPAKAETPAALTEQNPALEEEEEEENQSDPSTPLQAFLES 125
Query: 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202
+E+LK ++ + G+++EAL+ +K L+ +P WK L A MG++ A+
Sbjct: 126 NAEAIESLKSLLLQKLENGQDEEALKIIKLLVSAQPEVTGWKFLMARLLSEMGRVQDARN 185
Query: 203 LFKDILKERPLLLRALHD 220
+F++IL PL AL +
Sbjct: 186 VFEEILVYNPLSFEALFE 203
>gi|356512243|ref|XP_003524830.1| PREDICTED: uncharacterized protein LOC100808986 [Glycine max]
Length = 288
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%)
Query: 139 LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198
LLE + ALK ++Q + G + EA +KRLI +P+ +WK L A G +
Sbjct: 83 LLETNTEALAALKSLLQQKLELGEDDEAFSILKRLIAAQPDAADWKFLAARLAAETGDVE 142
Query: 199 TAKRLFKDILKERPLLLRALHD 220
A+ ++++L PL AL +
Sbjct: 143 AARGYYQEVLAANPLSFEALFE 164
>gi|20093095|ref|NP_619170.1| hypothetical protein MA4306 [Methanosarcina acetivorans C2A]
gi|19918428|gb|AAM07650.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1079
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 99 FGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNM 158
+N AL GK +A NL +A+ E F LLE E N+EAL
Sbjct: 738 LAANASDPEALQGKSQALVNLGRYEEAV-------ECFNPLLELESENIEALDGRAFSLT 790
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ GR +EALE R++ +EP+ + +A +E +G+ A + +IL+ P
Sbjct: 791 KSGRQEEALEDYDRILQLEPSNSKAMTEKASLFEELGRYEEAASTYGEILRITP 844
>gi|242017488|ref|XP_002429220.1| tetratricopeptide repeat protein 10, tpr10, putative [Pediculus
humanus corporis]
gi|212514109|gb|EEB16482.1| tetratricopeptide repeat protein 10, tpr10, putative [Pediculus
humanus corporis]
Length = 845
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N + L + + G ++AL F KR + I PNE +W+LL A CY+ +G A +
Sbjct: 625 PSNFDVLDWLGSYYLSLGVPEKALPFFKRAVMIAPNEPKWQLLLASCYKKIGNHQKAVEV 684
Query: 204 FKDILKERPLLLRALHDLGRYVS 226
+K++ KE P + L L R S
Sbjct: 685 YKNLHKENPDNIECLQLLVRLTS 707
>gi|307111439|gb|EFN59673.1| hypothetical protein CHLNCDRAFT_133184 [Chlorella variabilis]
Length = 1558
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 104 RPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN 163
R A PG + A ++ +L S +F++ L +EP N L+ R G
Sbjct: 1350 RALAARPGFVTALQSWGRLEASLGHLSRARPLFQQALRQEPSNTHVLQAWGVAEARHGDA 1409
Query: 164 KEALEFVKRLIDIEPN-EVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
EA ++R D +P W L E G + A++L++ +L+ RP + AL LG
Sbjct: 1410 GEARRLLRRCTDADPECRAAWHAWARL-EEEAGDVGAARQLYRTVLRLRPGSVPALSALG 1468
Query: 223 RYVSMTLQIQS 233
R Q+Q+
Sbjct: 1469 RLERRAGQMQA 1479
>gi|297829478|ref|XP_002882621.1| hypothetical protein ARALYDRAFT_341089 [Arabidopsis lyrata subsp.
lyrata]
gi|297328461|gb|EFH58880.1| hypothetical protein ARALYDRAFT_341089 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
+ E+ LE +V+AL ++ + + R+++A+E + RLI+IEP+E +W ++A
Sbjct: 65 VVEETLEILSNDVKALSLLTEIKFKSDRHEQAIEVLDRLIEIEPDERKWPAMKARILSYH 124
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDL 221
GK A F+ IL++ P+ + A H L
Sbjct: 125 GKSELAIEAFERILEKDPIRVDAYHYL 151
>gi|302763481|ref|XP_002965162.1| hypothetical protein SELMODRAFT_406352 [Selaginella moellendorffii]
gi|300167395|gb|EFJ34000.1| hypothetical protein SELMODRAFT_406352 [Selaginella moellendorffii]
Length = 336
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%)
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197
K +E+EP N A K ++ M G +EA+E + R I++EP +E++ ++A Y +G +
Sbjct: 125 KTIEEEPGNPVAYKDLLSLRMENGEVREAIEVLGRRIELEPEHLEYRFMRARAYGFVGDV 184
Query: 198 STAKRLFKDILKERPLLLRALHDL 221
++ F++ + +P +AL L
Sbjct: 185 RHSREEFRERVAIQPFSAKALQGL 208
>gi|20091650|ref|NP_617725.1| hypothetical protein MA2826 [Methanosarcina acetivorans C2A]
gi|19916818|gb|AAM06205.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 1121
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 117 ENLKEKRDALMGKSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRL 173
E L+ K +AL+ EE F LLE EP N+EAL R R +EALE R+
Sbjct: 745 EALQGKSEALINLGRYEEAIACFNPLLELEPENIEALDGRALALARSERREEALEDYNRI 804
Query: 174 IDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ ++P+ + +A +E +G+ A + +IL P
Sbjct: 805 LQLDPSNTKALAEKASLFEELGRYEEAASTYGEILLITP 843
>gi|302790934|ref|XP_002977234.1| hypothetical protein SELMODRAFT_417125 [Selaginella moellendorffii]
gi|300155210|gb|EFJ21843.1| hypothetical protein SELMODRAFT_417125 [Selaginella moellendorffii]
Length = 354
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 67 PRSSLSPENKIMKVLKEK----AVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLK-- 120
P+ S P + LK++ A +FL S + L + ++ R + A A+EN+
Sbjct: 59 PQCSRLPSAVEERSLKDRVRRIAALFLGSSALLLAAGMNSCRVARAEEAIASANENVATT 118
Query: 121 ---EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177
E+++ G E ++ + ++E + + G M + A++ + +LID+
Sbjct: 119 TAVEQKE---GAPEKKKTLRRRTQEEEEEILDDLTRLHGFMEKRDMPAAIKVLSKLIDMN 175
Query: 178 PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
P+++E++ ++ YE +G L A + F+D +K PL LRAL L
Sbjct: 176 PSQLEFRFIRGHAYEYIGDLDNALKEFEDAVKVDPLSLRALQGLA 220
>gi|302763931|ref|XP_002965387.1| hypothetical protein SELMODRAFT_406722 [Selaginella moellendorffii]
gi|300167620|gb|EFJ34225.1| hypothetical protein SELMODRAFT_406722 [Selaginella moellendorffii]
Length = 355
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 85 AVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLK-----EKRDALMGKSEVEEMFEKL 139
A +FL S + L + ++ R + A A+EN+ E+++ G E ++ +
Sbjct: 82 AALFLGSSALLLAAGMNSCRVARAEEAIASANENVATTTAMEQKE---GAPEKKKTLRRR 138
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
++E + + G M + A++ + +LID+ P+++E++ ++ YE +G L
Sbjct: 139 TQEEEEEILDDLTRLHGFMEKRDMPAAIKVLSKLIDMNPSQLEFRFIRGHAYEYIGDLDN 198
Query: 200 AKRLFKDILKERPLLLRALHDLG 222
A + F+D +K PL LRAL L
Sbjct: 199 ALKEFEDAVKVDPLSLRALQGLA 221
>gi|428780061|ref|YP_007171847.1| hypothetical protein Dacsa_1834 [Dactylococcopsis salina PCC 8305]
gi|428694340|gb|AFZ50490.1| hypothetical protein Dacsa_1834 [Dactylococcopsis salina PCC 8305]
Length = 288
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+E +LEKEP N AL+ +++ +++G + AL +++L D+ P + +++L A + G
Sbjct: 76 YEAVLEKEPENESALQGLIEVRIQQGDIEGALIPLEKLADLNPEQEAYRILLAQAKQQTG 135
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
L A ++ IL E+P +AL L
Sbjct: 136 DLEGASDAYRFILDEKPGDTQALQGL 161
>gi|320103076|ref|YP_004178667.1| hypothetical protein Isop_1533 [Isosphaera pallida ATCC 43644]
gi|319750358|gb|ADV62118.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
pallida ATCC 43644]
Length = 892
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 44/74 (59%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
++ KLLE PR+ L+ + + N+ GR EA+E+ +R ++++PN+ E L L +
Sbjct: 161 LYRKLLETAPRSTAVLRRLSRINLVLGRINEAVEYSRRAVELDPNDSESLQLVVLFLQRA 220
Query: 195 GKLSTAKRLFKDIL 208
G+L A+ L + +L
Sbjct: 221 GQLDEARTLLETVL 234
>gi|377574403|ref|ZP_09803433.1| hypothetical protein MOPEL_074_00850 [Mobilicoccus pelagius NBRC
104925]
gi|377536959|dbj|GAB48598.1| hypothetical protein MOPEL_074_00850 [Mobilicoccus pelagius NBRC
104925]
Length = 301
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLL 186
+ +++V+ + +K+ EP+N A+K + R G ++A E R++++ P++V+ +L
Sbjct: 142 LDQAKVDRLTKKIA-AEPKNTAAMKELANEYSRAGHYRKAAETQTRIVELNPDDVDARLA 200
Query: 187 QALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ + M L A++ + ++L+ P A +DLG
Sbjct: 201 LGVAHFNMDDLPAAEKHWNEVLRRDPDNANAYYDLG 236
>gi|443317022|ref|ZP_21046445.1| hypothetical protein Lep6406DRAFT_00022940 [Leptolyngbya sp. PCC
6406]
gi|442783362|gb|ELR93279.1| hypothetical protein Lep6406DRAFT_00022940 [Leptolyngbya sp. PCC
6406]
Length = 299
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 93 VIFLGSF----------GSNLRP-SVALPGKMRASENLK-EKRDALMGKSEVEEMFEKLL 140
V+ LG+F G N RP S + PG + +++ E D G +E +L
Sbjct: 20 VVALGAFLTLSILPILGGRNSRPTSASTPGSTPEAVDMQTELADRARG-------YELVL 72
Query: 141 EKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200
E+EP N A+ +++ ++ G +E + +L D+ P+ E+++L + +G L A
Sbjct: 73 EREPDNQTAILGLVETRIQLGDLAGVVEPLSKLADLNPDVTEYRVLLGQTKQALGDLEGA 132
Query: 201 KRLFKDILKERPLLLRALHDL 221
+ ++ +L P ++AL L
Sbjct: 133 AQAYRTVLTSSPGDMKALQGL 153
>gi|260438010|ref|ZP_05791826.1| putative tetratricopeptide repeat-containing domain protein
[Butyrivibrio crossotus DSM 2876]
gi|292809490|gb|EFF68695.1| putative tetratricopeptide repeat-containing domain protein
[Butyrivibrio crossotus DSM 2876]
Length = 351
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLL--Q 187
SE E+++ + K+ N E ++R + EALE++ + ++ E + LL Q
Sbjct: 250 SEAEDLYMDYINKDTSNSEVYNQYGAYLIKRFKYTEALEYISKGLESAKGETKKALLYNQ 309
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
A+CYE +G S A LF+ +K+ +AL
Sbjct: 310 AICYEYLGDFSKALDLFESYVKDYSDDTKAL 340
>gi|386813992|ref|ZP_10101216.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403489|dbj|GAB64097.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 332
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F+K++E++P NV+A + GR +A+E K+ + I+P+ L + Y
Sbjct: 110 EAFQKVIEQKPDNVDAYYNLGSAYFDTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYSK 169
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227
+GK A ++ K ++ P L A +LG SM
Sbjct: 170 IGKYDDAIQILKKRIELDPNLAIAHSNLGIVYSM 203
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E EMF+K L K P N +A + ++G A+E +++I+ +P+ V+
Sbjct: 72 DEAIEMFKKSLAKNPNNTDAYNNIGLAYAQKGMFDNAIEAFQKVIEQKPDNVDAYYNLGS 131
Query: 190 CYELMGKLSTAKRLFKDILKERP-------LLLRALHDLGRY 224
Y G+ A FK ++ +P LL A +G+Y
Sbjct: 132 AYFDTGRFDKAIESFKKTVQIKPDHRSAYSLLGIAYSKIGKY 173
>gi|427729533|ref|YP_007075770.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
gi|427365452|gb|AFY48173.1| Tfp pilus assembly protein PilF [Nostoc sp. PCC 7524]
Length = 290
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 84/162 (51%), Gaps = 22/162 (13%)
Query: 73 PENK-IMKVLKEKAVI-FLAGSVI-FLGSFG----SNLRPSVALPGKMRASENLKEK-RD 124
P N+ I++++ AV+ F+ SV+ +G+ SN P A P A+ K K +D
Sbjct: 4 PRNRWIVQIILALAVLTFVGVSVVPIIGAINNTTSSNQNP--ASPSTNSAASEQKTKLQD 61
Query: 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG-----NMRRGRNKEALEFVKRLIDIEPN 179
+ G +E +L++EP N ALK ++Q ++++G + +E +++L + P+
Sbjct: 62 TVRG-------YELVLQREPENQTALKGLLQARLQLLSLKQGNIQGVIEPLEKLAKLNPD 114
Query: 180 EVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ E+ +L A + +G A + ++ IL +P L+AL +
Sbjct: 115 QSEYGVLLAQAKQQIGDKEGAAQAYRTILDTKPGDLKALQGM 156
>gi|427712546|ref|YP_007061170.1| hypothetical protein Syn6312_1459 [Synechococcus sp. PCC 6312]
gi|427376675|gb|AFY60627.1| hypothetical protein Syn6312_1459 [Synechococcus sp. PCC 6312]
Length = 295
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 6/101 (5%)
Query: 129 KSEVEEM-FEKLLEKEPRNVEALKVVMQGNMRR-GRNKEALEFV----KRLIDIEPNEVE 182
K E EE ++ +LE+EP N+ AL+ ++ ++ G K +E + +RL + P + +
Sbjct: 60 KYEAEETGYQAVLEREPDNIAALEGLINARLQLIGLGKRPVETIITPLERLTTLNPTQPQ 119
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
+ +L A E GK A R ++ +L + P + AL L +
Sbjct: 120 YAVLLAQAQEQAGKPEEAARTYQTVLDKNPTNINALRGLAQ 160
>gi|355695674|gb|AES00089.1| intraflagellar transport 88-like protein [Mustela putorius furo]
Length = 785
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|434405516|ref|YP_007148401.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
gi|428259771|gb|AFZ25721.1| Tfp pilus assembly protein PilF [Cylindrospermum stagnale PCC 7417]
Length = 350
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 73 PENK-IMKVLKEKAVIFLAGSVI--FLGSFGSNLRP---SVALPGKMRASENLKEKRDAL 126
P N+ I++V+ AVI G I +G+ P + + G + S+ + D +
Sbjct: 46 PRNRWIVQVVLALAVIAFVGVSIMPIIGALNDQQSPGQNTASSKGSLPNSDQKSKLDDQV 105
Query: 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR------RGRNKEA-----LEFVKRLID 175
G +E +L+KEP N ALK V++ ++ RG K A +E +++L
Sbjct: 106 RG-------YELVLQKEPENQTALKGVLEARLQLLSQKGRGEIKPADIQAVIEPLEKLAK 158
Query: 176 IEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231
+ P++ E+ +L A + +G A ++ IL RP L+AL + +TLQI
Sbjct: 159 LNPDKSEYAVLLAQAKQQIGDKEGAAVAYRSILATRPGDLKALQGM-----VTLQI 209
>gi|410947119|ref|XP_003980301.1| PREDICTED: intraflagellar transport protein 88 homolog [Felis
catus]
Length = 825
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P++V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPSQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|428178573|gb|EKX47448.1| hypothetical protein GUITHDRAFT_106889 [Guillardia theta CCMP2712]
Length = 847
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
++A+E+ ++ I+P EV+W+L+ A CY +G A R +++I K P L L+ L R
Sbjct: 663 EKAMEYFQKAAQIQPKEVKWRLMVASCYRRIGSYQLALRTYEEIEKSHPDNLECLNYLVR 722
>gi|338715235|ref|XP_001489102.3| PREDICTED: intraflagellar transport protein 88 homolog [Equus
caballus]
Length = 825
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|359322789|ref|XP_534539.4| PREDICTED: intraflagellar transport protein 88 homolog [Canis lupus
familiaris]
Length = 825
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|403739707|ref|ZP_10952043.1| hypothetical protein AUCHE_17_00230 [Austwickia chelonae NBRC
105200]
gi|403190450|dbj|GAB78813.1| hypothetical protein AUCHE_17_00230 [Austwickia chelonae NBRC
105200]
Length = 349
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+S+V+E+ EK + +P++V AL+ + G +A E+ ++++DI+P ++ +L+ A
Sbjct: 187 ESKVKELTEKT-KADPKDVTALRGLTDQYYGAGEFAKAAEWQQKVVDIQPADISSRLVLA 245
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
C G + A+ + +++ P + A ++LG
Sbjct: 246 ACLANSGDATRAETEWTKVIELDPTQVEAYYNLG 279
>gi|301107085|ref|XP_002902625.1| Intraflagellar Transport Protein 88 [Phytophthora infestans T30-4]
gi|262098499|gb|EEY56551.1| Intraflagellar Transport Protein 88 [Phytophthora infestans T30-4]
Length = 869
Score = 45.4 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
Query: 94 IFLGSFGSNLR-----PSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKE---PR 145
I L FGSN + +VA PG + + K D + + F LE P
Sbjct: 594 ILLSCFGSNDKRERNTKNVADPGVLARLGQIFNKDD------DETQAFHYHLESYRYFPI 647
Query: 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205
N++ + + ++ ++A++F +R I+PNEV+W+L+ CY MG A L++
Sbjct: 648 NLDVISWLGVWYVKSELYEKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMLLYE 707
Query: 206 DILKERPLLLRALHDL 221
I ++ P L L L
Sbjct: 708 QIHQDYPENLECLRYL 723
>gi|291190309|ref|NP_001167232.1| intraflagellar transport protein 88 homolog [Salmo salar]
gi|223648786|gb|ACN11151.1| Intraflagellar transport protein 88 homolog [Salmo salar]
Length = 845
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP 178
L E D+ KS+ + +++ P N++ ++ + + ++A+++ +R I+P
Sbjct: 591 LGELYDSEGDKSQAFQYYQESFRYFPSNIDVIEWLGAYYIDTQFCEKAIQYFERATLIQP 650
Query: 179 NEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
+V+W+L+ A CY G A +KDI ++ P L+R D+G
Sbjct: 651 TQVKWQLMVASCYRRSGNYQKALETYKDIHRKFPENIECLRFLVRLCTDMG 701
>gi|149598974|ref|XP_001516420.1| PREDICTED: intraflagellar transport protein 88 homolog
[Ornithorhynchus anatinus]
Length = 823
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDARALAKLGELYDNEGDKSQAFQYYYESYRYLPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I P +V+W+L+ A CY G A +K+I K+ P L+R D+
Sbjct: 643 YFERAALIRPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|291392959|ref|XP_002712851.1| PREDICTED: intraflagellar transport 88 homolog [Oryctolagus
cuniculus]
Length = 831
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGELHDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------------LLL 215
+ +R I+P +V+W+L+ A C+ G A +KDI K+ P L+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHKKFPENVECKXYYFGLRFLV 702
Query: 216 RALHDLG 222
R D+G
Sbjct: 703 RLCTDIG 709
>gi|146184699|ref|XP_001029949.2| SLEI family protein [Tetrahymena thermophila]
gi|146143045|gb|EAR82286.2| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2342
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 122 KRDALMGKSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP 178
K D + KS ++E ++ +E +P V+A + + Q ++ + + E K++I+IEP
Sbjct: 83 KADIHLKKSNIDEAIISLKQAIEIDPNFVQAYQKLAQAYKKQNKLDQITECYKKIIEIEP 142
Query: 179 NEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
+E AL YE+ G++ A +K IL P ++A L R
Sbjct: 143 KNMEAFHELALTYEIKGQIDEAYAWYKKILTIDPQFIKAYISLAR 187
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 47/102 (46%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F K+L P ++A ++++ EA+ +K+ I+I+PN V+ A Y+
Sbjct: 64 ESFNKVLSINPNYLKAYASKADIHLKKSNIDEAIISLKQAIEIDPNFVQAYQKLAQAYKK 123
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSLF 235
KL +K I++ P + A H+L + QI +
Sbjct: 124 QNKLDQITECYKKIIEIEPKNMEAFHELALTYEIKGQIDEAY 165
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 41/85 (48%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F K++E +P+ V AL + + N++ALE+ + ++I P + L YE+
Sbjct: 1050 EYFNKVIELDPKEVVALNNIGLAYYDQKMNEKALEYYNKALEINPTFQQSIYNTGLVYEI 1109
Query: 194 MGKLSTAKRLFKDILKERPLLLRAL 218
+ A + +LK P ++L
Sbjct: 1110 QNQYEKALEYYNKVLKINPTEKKSL 1134
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F K +E EP+ +A V + ++ +ALE+ K+ ++I PN + L YE
Sbjct: 777 ECFYKTIEIEPKKYDAYNGVGAIFYAQKKDDQALEYFKKALEINPNYILSIYNSGLIYEQ 836
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDL 221
G+ A +K ++ P ++L +
Sbjct: 837 KGQSEKALECYKKVISINPADKKSLEKI 864
>gi|91200098|emb|CAJ73141.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 344
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E E F+K+L +P N +AL + + G E+LE KRL ++ P +LL
Sbjct: 260 DEAIEAFKKVLNLDPENHDALYNLGFAYNKSGLYGESLEICKRLTELNPANTNVRLLMGD 319
Query: 190 CYELMGKLSTAKRLFKDILKE 210
Y +GK AKR F DI KE
Sbjct: 320 SYNKLGKHEEAKREF-DIYKE 339
>gi|340381680|ref|XP_003389349.1| PREDICTED: intraflagellar transport protein 88 homolog [Amphimedon
queenslandica]
Length = 803
Score = 44.7 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
PG +R L E D+ +S+ + + P N+E + + M +A +
Sbjct: 589 PGVLR---KLGELYDSENDRSQAYHYYYESFRYCPTNIEVITWLGAYYMDSQYFDKAATY 645
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
++ I+P++V W+L+ A CY MG A R +K ILK P
Sbjct: 646 FEKASLIQPDQVNWQLMIASCYRKMGNYQLAYRCYKSILKSFP 688
>gi|386346743|ref|YP_006044992.1| hypothetical protein [Spirochaeta thermophila DSM 6578]
gi|339411710|gb|AEJ61275.1| Tetratricopeptide TPR_2 repeat-containing protein [Spirochaeta
thermophila DSM 6578]
Length = 654
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E++++ ++K P V+A K + + G+ + AL ++ ++P + LL A C
Sbjct: 43 ELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTDSHLLYARCLLA 102
Query: 194 MGKLSTAKRLFKDILKERP 212
+G+L A+R+++DIL P
Sbjct: 103 LGRLEEAERIYRDILSREP 121
>gi|413958629|ref|ZP_11397868.1| hypothetical protein BURK_001840 [Burkholderia sp. SJ98]
gi|413941209|gb|EKS73169.1| hypothetical protein BURK_001840 [Burkholderia sp. SJ98]
Length = 619
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
++ E ++ L EP +V+AL + ++G++ EA E V+R +D+ P + +L
Sbjct: 18 TDAERDYQAALAAEPHHVDALHYLGVLRHQQGQHAEAAELVRRAVDLRPTDAGLQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPGFPLAQYNLG 110
>gi|428301076|ref|YP_007139382.1| hypothetical protein Cal6303_4509 [Calothrix sp. PCC 6303]
gi|428237620|gb|AFZ03410.1| hypothetical protein Cal6303_4509 [Calothrix sp. PCC 6303]
Length = 296
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 136 FEKLLEKEPRNVEALKVVMQG-----NMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
+E +L+KEP N ALK ++Q ++++G+ ++ +E +++L ++P E ++ +L +
Sbjct: 74 YESVLQKEPENQTALKGLLQARLQLLSLKQGKIQDVIEPLEKLAKLDPEETKYAVLLSQA 133
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ +G A + +++L+ +P + AL +
Sbjct: 134 KQQIGDKEGATQALRNVLETKPGNMEALQAM 164
>gi|348681758|gb|EGZ21574.1| hypothetical protein PHYSODRAFT_495507 [Phytophthora sojae]
Length = 876
Score = 44.3 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
++A++F +R I+PNEV+W+L+ CY MG A L++ I ++ P L L L
Sbjct: 666 EKAIQFFERASQIQPNEVKWRLMVTSCYRRMGAYQKAMVLYEQIHQDYPENLECLRYL 723
>gi|328952032|ref|YP_004369366.1| hypothetical protein Desac_0294 [Desulfobacca acetoxidans DSM
11109]
gi|328452356|gb|AEB08185.1| Tetratricopeptide TPR_2 repeat-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 599
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E +EK++ +P N EA+ + + ++G +A+ +K LI P++ C
Sbjct: 155 EATTEYEKIITLDPANEEAVIFLATLHAQQGNCAKAVNLLKNLIKKNPDQFIALFYLGKC 214
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
Y +G+L+ AK+ F+ L ++P L A+ +LG
Sbjct: 215 YIELGQLTAAKKEFQQALHKQPEFLPAMLELG 246
>gi|428316918|ref|YP_007114800.1| MCP methyltransferase, CheR-type [Oscillatoria nigro-viridis PCC
7112]
gi|428240598|gb|AFZ06384.1| MCP methyltransferase, CheR-type [Oscillatoria nigro-viridis PCC
7112]
Length = 558
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 137 EKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196
++ ++ + N +A ++ Q G +A+E+ KR +EP V LQA E G+
Sbjct: 412 QEAIDLQGHNFDAYFLIAQVQANSGNYSQAIEYCKRARKVEPGSVYTDYLQAQIAEEQGQ 471
Query: 197 LSTAKRLFKDILKERPLLLRALHDLG 222
L TAK L K + P + A +LG
Sbjct: 472 LETAKNLLKRTIYMCPSFVSAYIELG 497
>gi|126327367|ref|XP_001366386.1| PREDICTED: intraflagellar transport protein 88 homolog [Monodelphis
domestica]
Length = 825
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGELYDNEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIK 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A CY G A +K+I ++ P L+R D+
Sbjct: 643 YFERAALIQPTQVKWQLMVASCYRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|307718665|ref|YP_003874197.1| hypothetical protein STHERM_c09780 [Spirochaeta thermophila DSM
6192]
gi|306532390|gb|ADN01924.1| TPR domain protein [Spirochaeta thermophila DSM 6192]
Length = 654
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 44/79 (55%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E++++ ++K P V+A K + + G+ + AL ++ ++P + LL A C
Sbjct: 43 ELYQQAIQKNPAFVQAYKGLAEAYFSLGQYEVALAGAEKAKSLDPRSTDNHLLYARCLLA 102
Query: 194 MGKLSTAKRLFKDILKERP 212
+G+L A+R+++DIL P
Sbjct: 103 LGRLEEAERIYRDILSREP 121
>gi|403373486|gb|EJY86662.1| TPR Domain containing protein [Oxytricha trifallax]
Length = 890
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 43/78 (55%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P ++ + + + ++ + ++A+ + +R I+P EV+W+L+ A CY M + A ++
Sbjct: 711 PAKIDVISCLGMHHAKQDQFEKAIIYFERAYQIQPKEVKWQLMIASCYRRMNLFNEALKV 770
Query: 204 FKDILKERPLLLRALHDL 221
++DI E P + L L
Sbjct: 771 YEDIHAENPDNIDCLRGL 788
>gi|348583351|ref|XP_003477436.1| PREDICTED: intraflagellar transport protein 88 homolog [Cavia
porcellus]
Length = 825
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSKALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENADCLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|333993657|ref|YP_004526270.1| putative slei family protein [Treponema azotonutricium ZAS-9]
gi|333734825|gb|AEF80774.1| putative slei family protein [Treponema azotonutricium ZAS-9]
Length = 865
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E + F LL K P+++EAL + R+G+ ++AL + ID+EP + E+
Sbjct: 57 TEAADEFTTLLAKNPQDIEALNNIAVIYRRQGKLQDALGALVEAIDLEPTKAEFHYNIGN 116
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ MG L A + +++ P + A ++LG
Sbjct: 117 IHKQMGNLKAASMAYAKVIELDPNYVSAYNNLG 149
>gi|146184776|ref|XP_001030101.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|146142898|gb|EAR82438.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 739
Score = 44.3 bits (103), Expect = 0.047, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E + + +++ + A F +R I+P E++W+L+ A CY MG A ++
Sbjct: 564 PTNIETIGWLGIYYVKQEYYERACHFFERASQIQPKEIKWRLMVASCYRRMGSYQKALKI 623
Query: 204 FKDILKERP 212
+++I ++ P
Sbjct: 624 YEEIYQDEP 632
>gi|157879370|pdb|1NA0|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879371|pdb|1NA0|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 125
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-WKLLQA 188
E E ++K LE +P N EA + ++G EA+E+ ++ ++++PN E W L
Sbjct: 26 DEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGN 85
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
Y+ G A ++ L+ P A +LG
Sbjct: 86 AYYK-QGDYDEAIEYYQKALELDPNNAEAKQNLGN 119
>gi|307150156|ref|YP_003885540.1| hypothetical protein Cyan7822_0215 [Cyanothece sp. PCC 7822]
gi|306980384|gb|ADN12265.1| Tetratricopeptide TPR_2 repeat protein [Cyanothece sp. PCC 7822]
Length = 283
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ +++ +++G K A+E ++RL + P + E+ L A E +
Sbjct: 60 YQMVLEREPENQTALQGLLEARLKQGDIKAAIEPLERLALLNPQQSEYTFLLAQAKERVE 119
Query: 196 KLSTAKRLFKDILKERP---LLLRALHDL 221
A ++ IL P + L+ L DL
Sbjct: 120 DFEGASAAYRAILAAYPGQMMALKGLVDL 148
>gi|17229191|ref|NP_485739.1| hypothetical protein all1699 [Nostoc sp. PCC 7120]
gi|17135519|dbj|BAB78065.1| all1699 [Nostoc sp. PCC 7120]
Length = 293
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 73 PENK-IMKVLKEKAVI-FLAGSVI-FLGSFGSNLRPS----VALPGKMRASENLKEKRDA 125
P N+ I++++ AV+ F+ SV+ +G+ N PS + G AS + D
Sbjct: 4 PRNRWIVQLILALAVLAFVGVSVVPIIGALNDNTSPSNQNSASNQGDSLASNQQSKLADE 63
Query: 126 LMGKSEVEEMFEKLLEKEPRNVEALK-----VVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
+ G +E +L++EP N ALK + +++G + +E +++L + PN+
Sbjct: 64 VRG-------YELVLQREPENQTALKGLLQARLQLLALKQGNVQSVIEPLEKLAKLNPNQ 116
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
E+ +L A + +G A ++ IL +P L+AL +
Sbjct: 117 SEYGVLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGM 157
>gi|395848202|ref|XP_003796745.1| PREDICTED: intraflagellar transport protein 88 homolog [Otolemur
garnettii]
Length = 806
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P R L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 564 VPTDSRVLSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 623
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 624 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 683
Query: 222 G 222
G
Sbjct: 684 G 684
>gi|74210446|dbj|BAE23402.1| unnamed protein product [Mus musculus]
Length = 942
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S+ EE + + L K R E L + GR+KEALE
Sbjct: 707 PSHHVAVVNLGRLYRSLGENSKAEEWYRRAL-KVARTAEVLSPLGALYYNTGRHKEALEV 765
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ + ++P++ E +L A +MG+ A+++ I+ E P L
Sbjct: 766 YREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLEC 813
>gi|351706998|gb|EHB09917.1| Intraflagellar transport protein 88-like protein [Heterocephalus
glaber]
Length = 893
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 643 VPTDSKALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 702
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 703 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVDCLRFLVRLCTDI 762
Query: 222 G 222
G
Sbjct: 763 G 763
>gi|164519037|ref|NP_945318.2| transmembrane and TPR repeat-containing protein 1 [Mus musculus]
gi|342187061|sp|Q3UV71.2|TMTC1_MOUSE RecName: Full=Transmembrane and TPR repeat-containing protein 1
Length = 942
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S+ EE + + L K R E L + GR+KEALE
Sbjct: 707 PSHHVAVVNLGRLYRSLGENSKAEEWYRRAL-KVARTAEVLSPLGALYYNTGRHKEALEV 765
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ + ++P++ E +L A +MG+ A+++ I+ E P L
Sbjct: 766 YREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLEC 813
>gi|302785157|ref|XP_002974350.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
gi|300157948|gb|EFJ24572.1| hypothetical protein SELMODRAFT_149863 [Selaginella moellendorffii]
Length = 1041
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 126 LMGKSEVEEMFEK---LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EV 181
L+ K + E+MF+ +L+ P N+ AL RGR +E+L KR++ + P
Sbjct: 136 LLAKGDYEQMFDVFKIVLDVRPDNLLALLGQACAQFNRGRFQESLGLYKRVLQMHPGCPA 195
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+L C +G+LS A++ F+ +L+ P L AL LG
Sbjct: 196 SVRLGLGFCRYRLGQLSKARQAFQRVLQLDPENLDALVALG 236
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-W 183
FEK+L+ P N E LKVV ++++GRN +ALE ++ + P +V+ W
Sbjct: 363 FEKVLDVHPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSPRDVDAW 411
>gi|390441808|ref|ZP_10229839.1| conserved exported hypothetical protein [Microcystis sp. T1-4]
gi|389834862|emb|CCI33965.1| conserved exported hypothetical protein [Microcystis sp. T1-4]
Length = 276
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQTALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATGSYRSLLASHPQDLRALTGL 146
>gi|377821448|ref|YP_004977819.1| hypothetical protein BYI23_A020040 [Burkholderia sp. YI23]
gi|357936283|gb|AET89842.1| Tetratricopeptide TPR_2 repeat protein [Burkholderia sp. YI23]
Length = 632
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
++ E ++ L EP +V+AL + ++G++ EA E V+R +D+ P + +L
Sbjct: 31 TDAERDYQAALAAEPLHVDALHYLGVLRHQQGQHAEAAELVRRAVDLRPTDAGLQLNLGN 90
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 91 ALKALGRLDDAIERFRNALTLAPGFPLAQYNLG 123
>gi|196005799|ref|XP_002112766.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
gi|190584807|gb|EDV24876.1| hypothetical protein TRIADDRAFT_56242 [Trichoplax adhaerens]
Length = 802
Score = 43.5 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183
D+ KS+ + + + P N+E + + + ++A+ + + I+PNEV+W
Sbjct: 583 DSQGDKSQAFQYYLESYRYYPSNIETISWIGSYYIESQFCEKAISYFDKASMIQPNEVKW 642
Query: 184 KLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
+L+ A CY ++G + A +K I ++ P L+R DLG
Sbjct: 643 QLMVASCYRIIGNYNRALDKYKQIHEKFPENTDCLKFLVRVCTDLG 688
>gi|167619111|ref|ZP_02387742.1| TPR domain protein [Burkholderia thailandensis Bt4]
gi|257138346|ref|ZP_05586608.1| TPR domain-containing protein [Burkholderia thailandensis E264]
Length = 614
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + L P N +AL + ++GR++EA + V R +++ PN+ +L
Sbjct: 18 DDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ +G+L A F++ L P A ++LG
Sbjct: 78 AFKALGRLDDAIERFRNALTLAPEFPLAHYNLG 110
>gi|83719090|ref|YP_442157.1| TPR domain-containing protein [Burkholderia thailandensis E264]
gi|83652915|gb|ABC36978.1| TPR domain protein [Burkholderia thailandensis E264]
Length = 626
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + L P N +AL + ++GR++EA + V R +++ PN+ +L
Sbjct: 30 DDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPNDAALQLNLGN 89
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ +G+L A F++ L P A ++LG
Sbjct: 90 AFKALGRLDDAIERFRNALTLAPEFPLAHYNLG 122
>gi|75906889|ref|YP_321185.1| hypothetical protein Ava_0666 [Anabaena variabilis ATCC 29413]
gi|75700614|gb|ABA20290.1| TPR repeat protein [Anabaena variabilis ATCC 29413]
Length = 293
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 73 PENK-IMKVLKEKAVI-FLAGSVI-FLGSFGSNLRPS----VALPGKMRASENLKEKRDA 125
P N+ I++++ AV+ F+ SV+ +G+ N PS + G AS + D
Sbjct: 4 PRNRWIVQLILALAVLAFVGVSVVPIIGALNDNTSPSNQNSASNQGSSLASNQQSKLADE 63
Query: 126 LMGKSEVEEMFEKLLEKEPRNVEALK-----VVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
+ G +E +L++EP N ALK + +++G + +E +++L + PN+
Sbjct: 64 VRG-------YELVLQREPENQTALKGLLQARLQLLALKQGNVQGVIEPLEKLAKLNPNQ 116
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
E+ +L A + +G A ++ IL +P L+AL +
Sbjct: 117 SEYGVLLAQAKQQIGDKEGAATAYRSILDTKPGDLKALQGM 157
>gi|167581033|ref|ZP_02373907.1| TPR domain protein [Burkholderia thailandensis TXDOH]
Length = 614
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + L P N +AL + ++GR++EA + V R +++ PN+ +L
Sbjct: 18 DDAEHGYRAALATNPANADALHLFGVLRHQQGRHEEAADLVGRAVELRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ +G+L A F++ L P A ++LG
Sbjct: 78 AFKALGRLDDAIERFRNALTLAPEFPLAHYNLG 110
>gi|428217109|ref|YP_007101574.1| hypothetical protein Pse7367_0846 [Pseudanabaena sp. PCC 7367]
gi|427988891|gb|AFY69146.1| TPR repeat-containing protein [Pseudanabaena sp. PCC 7367]
Length = 289
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 50/88 (56%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E +E +LE+EP+N AL+ +++ + G + A+ ++ L +I P+E ++L+ A Y
Sbjct: 42 EGYEAVLEREPKNQTALRGLVELRSQLGDFEGAIGPLQTLAEINPDEPGYRLILARTYMQ 101
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDL 221
+ K A ++ IL +P + AL +L
Sbjct: 102 IDKRDAAVNEYRTILTTKPGNVEALSNL 129
>gi|425470869|ref|ZP_18849729.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9701]
gi|389883373|emb|CCI36247.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9701]
Length = 279
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 50/86 (58%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQTALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L +P LRAL L
Sbjct: 121 DYAGATGSYRALLASQPQDLRALTGL 146
>gi|374289637|ref|YP_005036722.1| hypothetical protein BMS_3005 [Bacteriovorax marinus SJ]
gi|301168178|emb|CBW27767.1| putative exported protein [Bacteriovorax marinus SJ]
Length = 606
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E++EK L+K P LK V+Q G+ + + + +RL +I+ +++ K+ + Y
Sbjct: 259 EVYEKFLKKSPHAYAILKNVIQIYFALGKYDKVIPYAERLSNIDSSDLNLKVRLGILYAD 318
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233
+ AK +FK+IL P + L+ LG T ++ S
Sbjct: 319 SKRYEDAKGIFKEILVAVPKSDKVLYYLGTLYQQTGELDS 358
>gi|425467516|ref|ZP_18846796.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9809]
gi|389829693|emb|CCI28780.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9809]
Length = 276
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRALLASHPQELRALTGL 146
>gi|344284581|ref|XP_003414044.1| PREDICTED: intraflagellar transport protein 88 homolog [Loxodonta
africana]
Length = 825
Score = 43.5 bits (101), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D KS+ + + + P N+ ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGELYDGEGDKSQAFQYYYESYRYFPSNIGVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|428202826|ref|YP_007081415.1| hypothetical protein Ple7327_2572 [Pleurocapsa sp. PCC 7327]
gi|427980258|gb|AFY77858.1| hypothetical protein Ple7327_2572 [Pleurocapsa sp. PCC 7327]
Length = 278
Score = 43.1 bits (100), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 51/83 (61%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ +++ +++G K+A+E +++L + P + ++ +L A + +G
Sbjct: 63 YQLVLEREPDNQNALEGLLEVRLQQGDLKKAIEPLEKLARLNPQQTDYTILLAQAKQQVG 122
Query: 196 KLSTAKRLFKDILKERPLLLRAL 218
A +++IL +P ++AL
Sbjct: 123 DYEGAIAAYRNILASQPTDIQAL 145
>gi|254425015|ref|ZP_05038733.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
gi|196192504|gb|EDX87468.1| tetratricopeptide repeat domain protein [Synechococcus sp. PCC
7335]
Length = 300
Score = 43.1 bits (100), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 45/84 (53%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ +L +EP N AL ++ R G + +E ++RL+D+ P+E + +L A + +
Sbjct: 62 YTAVLSREPDNQTALSGIIYAKSRLGDLEGTVEPLERLVDLNPSEPRYAVLLAQTKQQLN 121
Query: 196 KLSTAKRLFKDILKERPLLLRALH 219
L A ++++ +L + P + AL
Sbjct: 122 DLEGAAQVYRSVLTQTPGSVPALE 145
>gi|425445428|ref|ZP_18825458.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
gi|389734580|emb|CCI01781.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9443]
Length = 276
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G ++A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQAALRGLLDTRLQQGDLRQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDLGR-YVSMTLQIQSL 234
+ A ++ +L P LRAL L ++S QI+++
Sbjct: 121 DYAGATGSYRALLASHPQDLRALTGLTNLFLSQNRQIEAI 160
>gi|440911858|gb|ELR61486.1| Intraflagellar transport protein 88-like protein, partial [Bos
grunniens mutus]
Length = 827
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 585 VPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 644
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 645 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 704
Query: 222 G 222
G
Sbjct: 705 G 705
>gi|296481738|tpg|DAA23853.1| TPA: intraflagellar transport 88 homolog [Bos taurus]
Length = 825
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|426236519|ref|XP_004012215.1| PREDICTED: intraflagellar transport protein 88 homolog [Ovis aries]
Length = 825
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|449448675|ref|XP_004142091.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLI--DIEPNEVEWKLLQALCYE 192
+F KLL++ RNV + V+ G + GR KEA++F +R+I +PN V + L C
Sbjct: 284 VFNKLLDE--RNVVSWNAVLSGFAQNGRGKEAIDFYQRMILAGCKPNAVTFLSLLWACNH 341
Query: 193 LMGKLSTAKRLFKDILKERPLLLRALH 219
G + F + P LL+A H
Sbjct: 342 -AGLVDEGYSYFNQARLDNPNLLKAEH 367
>gi|160707933|ref|NP_001104256.1| intraflagellar transport protein 88 homolog [Bos taurus]
Length = 825
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|449523361|ref|XP_004168692.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Cucumis sativus]
Length = 516
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLI--DIEPNEVEWKLLQALCYE 192
+F KLL++ RNV + V+ G + GR KEA++F +R+I +PN V + L C
Sbjct: 284 VFNKLLDE--RNVVSWNAVLSGFAQNGRGKEAIDFYQRMILAGCKPNAVTFLSLLWACNH 341
Query: 193 LMGKLSTAKRLFKDILKERPLLLRALH 219
G + F + P LL+A H
Sbjct: 342 -AGLVDEGYSYFNQARLDNPNLLKAEH 367
>gi|166365260|ref|YP_001657533.1| hypothetical protein MAE_25190 [Microcystis aeruginosa NIES-843]
gi|166087633|dbj|BAG02341.1| hypothetical protein MAE_25190 [Microcystis aeruginosa NIES-843]
Length = 276
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQTALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRALLASHPQELRALTGL 146
>gi|425457079|ref|ZP_18836785.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
gi|389801665|emb|CCI19198.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9807]
Length = 266
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G ++A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQAALRGLLDTRLQQGDLRQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDLGR-YVSMTLQIQSL 234
+ A ++ +L P LRAL L ++S QI+++
Sbjct: 121 DYAGATGSYRALLASHPQELRALTGLTNLFLSQNRQIEAI 160
>gi|425438829|ref|ZP_18819171.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9717]
gi|389717296|emb|CCH98581.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9717]
Length = 276
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATGSYRALLASHPQELRALTGL 146
>gi|425460709|ref|ZP_18840190.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9808]
gi|389826562|emb|CCI22812.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9808]
Length = 272
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRSLLASHPQNLRALTGL 146
>gi|167837462|ref|ZP_02464345.1| TPR domain protein [Burkholderia thailandensis MSMB43]
Length = 331
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + L P + +AL + ++GR++EA + V R +++ PN+ +L
Sbjct: 18 DDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADLVGRAVELRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ +G+L A F++ L P A ++LG
Sbjct: 78 AFKALGRLDEAIERFRNALTLAPEFPLAHYNLG 110
>gi|224369177|ref|YP_002603341.1| hypothetical protein HRM2_20780 [Desulfobacterium autotrophicum
HRM2]
gi|223691894|gb|ACN15177.1| tetratricopeptide (TPR) domain protein [Desulfobacterium
autotrophicum HRM2]
Length = 760
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
E+ F +EK+P N+ A ++ + G+N +A +F+++ + I+P E K+ +
Sbjct: 253 AEQAFLSAIEKDPENLNAHLMLARFYTHIGKNSQAEKFIRKALLIDPENFEAKMAYSEFL 312
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
K A+++ ++LK+RP L AL G+
Sbjct: 313 FAHNKNEQAEKIIDEVLKDRPKFLTALTVKGK 344
>gi|148678797|gb|EDL10744.1| cDNA sequence BC023818 [Mus musculus]
Length = 569
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S+ EE + + L K R E L + GR+KEALE
Sbjct: 334 PSHHVAVVNLGRLYRSLGENSKAEEWYRRAL-KVARTAEVLSPLGALYYNTGRHKEALEV 392
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ + ++P++ E +L A +MG+ A+++ I+ E P L
Sbjct: 393 YREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLEC 440
>gi|411117524|ref|ZP_11390011.1| hypothetical protein OsccyDRAFT_1454 [Oscillatoriales
cyanobacterium JSC-12]
gi|410713627|gb|EKQ71128.1| hypothetical protein OsccyDRAFT_1454 [Oscillatoriales
cyanobacterium JSC-12]
Length = 299
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 129 KSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
K+E+E +E +L++EP N AL+ +++ + + A+ +++L+ + PNE + +
Sbjct: 57 KAELEAQAKGYELVLQREPENPTALRGLLEARLALNDVRGAIAPLEKLVKLNPNESLYAV 116
Query: 186 LQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
L A + G A + ++++LK +P AL L
Sbjct: 117 LLAQAKQQTGDHEGAAQTYREVLKTKPGDTNALSGL 152
>gi|148264943|ref|YP_001231649.1| hypothetical protein Gura_2904 [Geobacter uraniireducens Rf4]
gi|146398443|gb|ABQ27076.1| Tetratricopeptide TPR_2 repeat protein [Geobacter uraniireducens
Rf4]
Length = 265
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
LE P +VEAL + GR+K+A+ K++ D+ P E + + L Y + ++
Sbjct: 66 LELAPDDVEALTALGDLYFEGGRHKDAIACYKKVTDLRPKEADGYVSIGLVYNSLERVDD 125
Query: 200 AKRLFKDILKERPLLLRALHDLG 222
A++ F L+ P + AL+ LG
Sbjct: 126 AQKAFNSALEVDPHNVFALNALG 148
>gi|410897585|ref|XP_003962279.1| PREDICTED: intraflagellar transport protein 88 homolog [Takifugu
rubripes]
Length = 843
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++A+++ +R I+PNEVEW L A CY G TA +K+ + P L+R
Sbjct: 636 EKAIKYFERATLIQPNEVEWHLRVAGCYRRSGNYHTALETYKETHQRFPEDIECLTFLVR 695
Query: 217 ALHDLG 222
+D+G
Sbjct: 696 LTNDMG 701
>gi|93279690|pdb|2FO7|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Trigonal Crystal Form)
gi|168177007|pdb|2HYZ|A Chain A, Crystal Structure Of An 8 Repeat Consensus Tpr Superhelix
(Orthorombic Crystal Form)
Length = 136
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-WKLLQA 188
E E ++K LE +PR+ EA + ++G EA+E+ ++ ++++P E W L
Sbjct: 18 DEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGN 77
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
Y+ G A ++ L+ P A ++LG
Sbjct: 78 AYYK-QGDYDEAIEYYQKALELDPRSAEAWYNLG 110
>gi|440756457|ref|ZP_20935658.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
gi|440173679|gb|ELP53137.1| tetratricopeptide repeat family protein [Microcystis aeruginosa
TAIHU98]
Length = 272
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQAALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRSLLASHPQNLRALTGL 146
>gi|443659546|ref|ZP_21132345.1| TPR repeat protein [Microcystis aeruginosa DIANCHI905]
gi|443332691|gb|ELS47286.1| TPR repeat protein [Microcystis aeruginosa DIANCHI905]
Length = 189
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQTALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRSLLVSHPQNLRALTGL 146
>gi|406934379|gb|EKD68695.1| TPR Domain containing protein [uncultured bacterium]
Length = 498
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
EMF+K E P++VEA + + + A +K+ ++I+P++ E K + A Y +
Sbjct: 126 EMFQKASELNPKSVEAFYNLASCYLLFNSPQNAETAIKKALEIKPDDYESKSVLAKAYSM 185
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLG 222
K A++LF++++ AL++LG
Sbjct: 186 GKKYDEARKLFEEVIGADSSNFDALNELG 214
>gi|302818335|ref|XP_002990841.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
gi|300141402|gb|EFJ08114.1| hypothetical protein SELMODRAFT_161156 [Selaginella moellendorffii]
Length = 973
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-W 183
FEK+L+ P N E LKVV ++++GRN +ALE ++ + P +V+ W
Sbjct: 336 FEKVLDVHPENCETLKVVGYIHLQQGRNDKALESFRKAAKVSPRDVDAW 384
>gi|167739676|ref|ZP_02412450.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 14]
Length = 376
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|406935176|gb|EKD69225.1| hypothetical protein ACD_47C00214G0001, partial [uncultured
bacterium]
Length = 1290
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E F KLL EP+NV AL + + G A F +RL +++ N V+ +L A
Sbjct: 482 EAVSYFLKLLSSEPKNVRALLNLARIKETLGETNNAFSFYERLYEVDENNVDARLGMAKI 541
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDL 221
G+L A L++ LK RP L L+ L
Sbjct: 542 LYSRGQLDKAMFLYQGALKMRPDSLDILNAL 572
>gi|422301519|ref|ZP_16388886.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9806]
gi|389789434|emb|CCI14509.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9806]
Length = 276
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQAALRGLLDTRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
A ++ +L P LRAL L
Sbjct: 121 DYPGATASYRALLASHPQELRALTGL 146
>gi|332298588|ref|YP_004440510.1| hypothetical protein Trebr_1961 [Treponema brennaborense DSM 12168]
gi|332181691|gb|AEE17379.1| Tetratricopeptide TPR_1 repeat-containing protein [Treponema
brennaborense DSM 12168]
Length = 987
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 50/93 (53%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
++++L+EK P + +AL + R +E++E +++ I ++P++ E Y+LM
Sbjct: 65 VYKRLVEKNPGDCKALTALGGVYRRLDLYQESIEALEQAISLQPDQTEIYYNLGFTYKLM 124
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227
G A FK +++E P + A + LG S+
Sbjct: 125 GMYQDALECFKVVIEENPNDILAYNHLGSLYSL 157
>gi|17979432|gb|AAL49858.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 740
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 126 LMGKSEVE---EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EV 181
L+ K E++ + F+ +L+ P NV AL RGR E+L+ KR + + P
Sbjct: 138 LLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSESLQLYKRALQVFPGCPA 197
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+L LC +G+L A++ F +L+ P + AL LG
Sbjct: 198 AVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALG 238
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
FEK+LE P N E LK + + G+N++ALE++++ ++P + +
Sbjct: 366 FEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPRDAQ 412
>gi|340501668|gb|EGR28423.1| hypothetical protein IMG5_176090 [Ichthyophthirius multifiliis]
Length = 673
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E + + +++ + A F +R I+ E++W+L+ A CY M L A ++
Sbjct: 498 PTNIETIGWLGIYYVKQELYERACHFFERASQIQSKEIKWRLMVASCYRRMSSLQKALKI 557
Query: 204 FKDILKERPLLLRAL 218
+++I +E P + L
Sbjct: 558 YEEIYQEEPRNIECL 572
>gi|26338035|dbj|BAC32703.1| unnamed protein product [Mus musculus]
Length = 604
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S+ EE + + L K R E L + GR+KEALE
Sbjct: 369 PSHHVAVVNLGRLYRSLGENSKAEEWYRRAL-KVARTAEVLSPLGALYYNTGRHKEALEV 427
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ + ++P++ E +L A +MG+ A+++ I+ E P L
Sbjct: 428 YREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLEC 475
>gi|402313777|ref|ZP_10832687.1| tetratricopeptide repeat protein [Lachnospiraceae bacterium ICM7]
gi|400365559|gb|EJP18610.1| tetratricopeptide repeat protein [Lachnospiraceae bacterium ICM7]
Length = 445
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
EM K+ E+ P+ L V G R G A+ + + I P+ VE K +AL Y+
Sbjct: 356 EMAPKMREEGPK---LLLKVADGLNRSGDFAGAIGYYDAALRISPDYVEAKYKKALAYKT 412
Query: 194 MGKLSTAKRLFKDILKERP 212
MG + TA LF +I+ P
Sbjct: 413 MGDVDTANNLFTEIITNYP 431
>gi|443694227|gb|ELT95420.1| hypothetical protein CAPTEDRAFT_226263 [Capitella teleta]
Length = 837
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++A+++ +R I+PN+V+WKL+ A C+ G A +K I K+ P L+R
Sbjct: 632 EKAIQYFERASIIQPNQVKWKLMIASCHRRSGNYQNALETYKSIHKKFPDNVECLRFLVR 691
Query: 217 ALHDLG 222
DLG
Sbjct: 692 LCTDLG 697
>gi|418292768|ref|ZP_12904698.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379064181|gb|EHY76924.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 733
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
G+FGS LRP LP + A+ LK A+ + ++MF PR V+ LK+ G
Sbjct: 237 GAFGSGLRPQYQLPLAVMAALKLKA---AVRVELTRQQMFT--FGYRPRTVQQLKLAADG 291
Query: 157 NMR-RGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
R R A+ R D +EVEW + C
Sbjct: 292 EGRLRAIEHRAIGQTSRFEDFTEHEVEWSGMLYAC 326
>gi|261334077|emb|CBH17071.1| intraflagellar transport protein IFT88, putative [Trypanosoma
brucei gambiense DAL972]
Length = 800
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P L L L
Sbjct: 637 KAIQFFERASQIQPQEVKWQLMVASCHRRRGDYVQAKRLYEALHRKYPENLECLRYL 693
>gi|71754697|ref|XP_828263.1| intraflagellar transport protein IFT88 [Trypanosoma brucei TREU927]
gi|70833649|gb|EAN79151.1| intraflagellar transport protein IFT88, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 800
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P L L L
Sbjct: 637 KAIQFFERASQIQPQEVKWQLMVASCHRRRGDYVQAKRLYEALHRKYPENLECLRYL 693
>gi|402824064|ref|ZP_10873452.1| hypothetical protein LH128_14147 [Sphingomonas sp. LH128]
gi|402262414|gb|EJU12389.1| hypothetical protein LH128_14147 [Sphingomonas sp. LH128]
Length = 226
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN---KEALEFVKRLIDIEPNEVEWKLL 186
++ E+ +E +P+N +A + + N AL +R ID EP+ +
Sbjct: 100 ADAAEVLRGAIEDDPKNADAWLALANSLVAHADNMLTPPALYAYQRAIDAEPDAPGARFF 159
Query: 187 QALCYELMGKLSTAKRLFKDILKERP 212
L Y GKL+ A+ L+ D++K P
Sbjct: 160 LGLAYAREGKLAEARALWVDVVKTAP 185
>gi|167720693|ref|ZP_02403929.1| TPR domain protein [Burkholderia pseudomallei DM98]
Length = 366
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|448238076|ref|YP_007402134.1| TPR repeat-containing protein [Geobacillus sp. GHH01]
gi|445206918|gb|AGE22383.1| TPR repeat-containing protein [Geobacillus sp. GHH01]
Length = 1385
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
E ++ ++ + R R +EA +++RL+ +P++V+ ++LQA+ + G+ AKR ++I
Sbjct: 1201 EFVEYLLAADEERKR-EEAKRWLERLLADDPDDVDLRVLQAVVWLQEGQREKAKRQLEEI 1259
Query: 208 LKERPLLLRALHDLGRYVSMTLQIQ 232
+ E PL AL LG + T + Q
Sbjct: 1260 VAEEPLAREALMLLGEHYMETGRYQ 1284
>gi|340058327|emb|CCC52682.1| putative intraflagellar transport protein IFT88 [Trypanosoma vivax
Y486]
Length = 785
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F +R I+P EV+W+L+ A C+ G + AKRL++ + ++ P
Sbjct: 631 KAIQFFERASQIQPQEVKWQLMVASCHRRRGDHAQAKRLYEALHRKYP 678
>gi|398017538|ref|XP_003861956.1| intraflagellar transport protein IFT88, putative [Leishmania
donovani]
gi|322500184|emb|CBZ35261.1| intraflagellar transport protein IFT88, putative [Leishmania
donovani]
Length = 811
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P
Sbjct: 629 KAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQVHRKYP 676
>gi|146090777|ref|XP_001466347.1| putative intraflagellar transport protein IFT88 [Leishmania
infantum JPCM5]
gi|134070709|emb|CAM69062.1| putative intraflagellar transport protein IFT88 [Leishmania
infantum JPCM5]
Length = 811
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P
Sbjct: 629 KAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQVHRKYP 676
>gi|91789984|ref|YP_550936.1| hypothetical protein Bpro_4146 [Polaromonas sp. JS666]
gi|91699209|gb|ABE46038.1| Tetratricopeptide TPR_2 [Polaromonas sp. JS666]
Length = 203
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
+F +L + P +V AL V ++ G AL + +++ ++PN QA E +
Sbjct: 42 VFNGILARSPNDVAALNSVAYDVLQSGHRVLALSYFEQVAQLQPNSANAHFNQAFVCEEL 101
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLG 222
G+L A+R F+ + + RA + LG
Sbjct: 102 GRLDDAERGFRAAIAIEEKMDRAWYGLG 129
>gi|392373589|ref|YP_003205422.1| TPR domain-containing protein [Candidatus Methylomirabilis oxyfera]
gi|258591282|emb|CBE67579.1| putative TPR domain protein [Candidatus Methylomirabilis oxyfera]
Length = 585
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E M+++ L +PRN E + + Q +R+ AL +RL+D EPN +KL
Sbjct: 242 DEARTMYQRALVDDPRNGEIRERLAQLLLRQKELDAALIEYRRLLDQEPNNSSFKLRIGF 301
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230
Y A + F+DIL+E H++ Y+ +TL+
Sbjct: 302 IYYEKRMYGEAIQAFRDILREES----GNHEVRYYLGLTLE 338
>gi|300865159|ref|ZP_07109983.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
gi|300336849|emb|CBN55133.1| hypothetical protein OSCI_1490019 [Oscillatoria sp. PCC 6506]
Length = 1093
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 117 ENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176
E +K A+ G + + KLLE EP N E L + Q +R + ++A+ +RL++I
Sbjct: 268 EAIKRYIQAIEGNPDNISEYYKLLELEPDNQEVLLKLAQALVRHEQIEDAIAIYRRLLEI 327
Query: 177 EPNEVEWKLLQALCYELMGKLS 198
P+E ++ L EL+GKLS
Sbjct: 328 SPHEQYYQQLG----ELLGKLS 345
>gi|427416040|ref|ZP_18906223.1| hypothetical protein Lepto7375DRAFT_1668 [Leptolyngbya sp. PCC
7375]
gi|425758753|gb|EKU99605.1| hypothetical protein Lepto7375DRAFT_1668 [Leptolyngbya sp. PCC
7375]
Length = 319
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
++R L G++ +E +LE+EP N AL+ +++ + G A E + RL ++ P E
Sbjct: 51 DRRAELEGRAN---GYELVLEREPDNQAALEGLVEARITLGDLAGAAEPLARLAELNPQE 107
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ +L A + + L A + ++ +L P + AL L
Sbjct: 108 PRYSVLLAQTKQQLNDLEGAAQTYRSVLTSTPGNMEALQGL 148
>gi|163782812|ref|ZP_02177808.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881933|gb|EDP75441.1| hypothetical protein HG1285_15791 [Hydrogenivirga sp. 128-5-R1-1]
Length = 546
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
SE E+++ +L+++P N AL+ + Q M GR +EA E +RL I+P ++K A+
Sbjct: 203 SEAEKLYRSILKEDPNNRSALEKLAQLYMATGRIQEAKELYERLYRIDPTNYQYKHQFAV 262
Query: 190 CYELMGKLSTAKRLFKDILKERP 212
G+ AK + ++ + P
Sbjct: 263 TLLQSGEFERAKEILAELYRLHP 285
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E +E+ ++ E P N ++ Q + G+ A+E+++R +DI +
Sbjct: 136 EAKEVLQRFAELSPNNPFPYYLLGQLYLSEGKVDRAIEYLQRALDIRKTFEAAFVTLGKI 195
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232
YE + S A++L++ ILKE P AL L + T +IQ
Sbjct: 196 YERSERFSEAEKLYRSILKEDPNNRSALEKLAQLYMATGRIQ 237
>gi|159029354|emb|CAO90730.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 272
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLEREPDNQTALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRSLLVSHPQNLRALTGL 146
>gi|167816884|ref|ZP_02448564.1| TPR domain protein [Burkholderia pseudomallei 91]
Length = 614
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL + + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYEHAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|281202506|gb|EFA76708.1| hypothetical protein PPL_09459 [Polysphondylium pallidum PN500]
Length = 593
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
+FE++L EPR L ++ + ++ G +AL++ KRL++IEP + Y ++
Sbjct: 244 VFEQVLTIEPRYAPVLGLISEMYIKLGNLNKALDYCKRLLEIEPENING-------YLML 296
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLGRYV--SMTLQIQSL 234
G ++ ++ F +K L RA+ D+GR V LQ+ S+
Sbjct: 297 GHVAFKQQSFDHAIK---LYKRAI-DIGRSVDRDTLLQVHSI 334
>gi|254192260|ref|ZP_04898749.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254259170|ref|ZP_04950224.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
gi|157987455|gb|EDO95231.1| TPR domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|254217859|gb|EET07243.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1710a]
Length = 614
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|254181068|ref|ZP_04887666.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
gi|184211607|gb|EDU08650.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1655]
Length = 614
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|341940821|sp|Q61371.2|IFT88_MOUSE RecName: Full=Intraflagellar transport protein 88 homolog; AltName:
Full=Recessive polycystic kidney disease protein Tg737;
AltName: Full=Tetratricopeptide repeat protein 10;
Short=TPR repeat protein 10; AltName:
Full=TgN(Imorpk)737Rpw
Length = 824
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 VPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +K+I ++ P L+R D+
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDI 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|427707388|ref|YP_007049765.1| hypothetical protein Nos7107_1990 [Nostoc sp. PCC 7107]
gi|427359893|gb|AFY42615.1| hypothetical protein Nos7107_1990 [Nostoc sp. PCC 7107]
Length = 291
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 16/154 (10%)
Query: 77 IMKVLKEKAVIFLAG-SVI-FLGSFGSNLRPS--VALPGKMRASENLKEKRDALMGKSEV 132
I++V+ AV+ G S+I + +F S S A G + +S+ + +D + G
Sbjct: 9 IVRVILALAVLMFVGVSIIPIISAFNSPTPTSQNTAPKGNLASSDQKSKLQDEVRG---- 64
Query: 133 EEMFEKLLEKEPRNVEALKVVMQG-----NMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187
+E +L++EP N ALK ++Q ++ +G + + +++L + P E+ +L
Sbjct: 65 ---YELVLQREPENQTALKGLLQARLQLLSLNQGDVQGVIAPLEKLAKLNPERSEYGVLL 121
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
A + +G A + ++ IL +P L+AL +
Sbjct: 122 AQAKQQIGDKEGAAQAYRTILDTKPGDLKALQGM 155
>gi|420255103|ref|ZP_14758056.1| tetratricopeptide repeat protein, partial [Burkholderia sp. BT03]
gi|398046724|gb|EJL39314.1| tetratricopeptide repeat protein, partial [Burkholderia sp. BT03]
Length = 576
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + LE +P +V+AL ++ ++G+++EA + V+R D+ P + +L
Sbjct: 30 DDAERDYRATLELDPVHVDALHLLGVLCHQQGQHEEAADLVRRAADLRPQDAALQLNLGN 89
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMT 228
+ +G+L A F++ L P A ++LG ++
Sbjct: 90 ALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALA 128
>gi|157821925|ref|NP_001100736.1| intraflagellar transport protein 88 homolog [Rattus norvegicus]
gi|149064079|gb|EDM14349.1| intraflagellar transport 88 homolog (Chlamydomonas) (predicted)
[Rattus norvegicus]
Length = 815
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +K+I ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|134277901|ref|ZP_01764616.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
gi|134251551|gb|EBA51630.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 305]
Length = 614
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|254195664|ref|ZP_04902091.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|418380278|ref|ZP_12966262.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
gi|418557446|ref|ZP_13122041.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|169652410|gb|EDS85103.1| tetratricopeptide repeat protein [Burkholderia pseudomallei S13]
gi|385365088|gb|EIF70785.1| TPR domain-containing protein [Burkholderia pseudomallei 354e]
gi|385377517|gb|EIF82088.1| TPR domain-containing protein [Burkholderia pseudomallei 354a]
Length = 614
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|76811375|ref|YP_334393.1| hypothetical protein BURPS1710b_3015 [Burkholderia pseudomallei
1710b]
gi|76580828|gb|ABA50303.1| TPR domain protein [Burkholderia pseudomallei 1710b]
Length = 626
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 30 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 89
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 90 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 122
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 204 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 263
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 264 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 318
>gi|354476527|ref|XP_003500476.1| PREDICTED: intraflagellar transport protein 88 homolog [Cricetulus
griseus]
Length = 825
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +K+I ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|319781910|ref|YP_004141386.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167798|gb|ADV11336.1| sulfotransferase [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 544
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 18/153 (11%)
Query: 81 LKEKAVIFLAGSVIFLGSFGSNLR----PSVAL----------PGKMRASENLKEKRDAL 126
L E++V + FL +FG+ +R P+ A+ P ++ A +NL +
Sbjct: 53 LIERSVSLQPTNPDFLNNFGTVMRDLGRPAAAIDFFRGAVDLRPDQLAARDNLGSSLKQV 112
Query: 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLL 186
E EE++ + + P +V A + + GR EAL + + I P + + LL
Sbjct: 113 GQFEEAEEIYRGTVARNPFHVRARIGLAETLQEAGRLDEALAAFREALAIRPKDAD--LL 170
Query: 187 QALCYELM--GKLSTAKRLFKDILKERPLLLRA 217
L LM GKL A LF+ L P + A
Sbjct: 171 HGLGVGLMEKGKLDEAADLFRQALAINPAMATA 203
>gi|302782411|ref|XP_002972979.1| hypothetical protein SELMODRAFT_98565 [Selaginella moellendorffii]
gi|300159580|gb|EFJ26200.1| hypothetical protein SELMODRAFT_98565 [Selaginella moellendorffii]
Length = 187
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLI--DIEPNEVEWKLLQALCYE 192
+F+ +LE RN + ++ G + G N+EALE VK+++ +E + V L A C +
Sbjct: 28 LFDGMLE---RNAVSWNAMLTGYAQNGHNQEALELVKQMLLHGLEIDHVGGLCLLAACSD 84
Query: 193 LMGKLSTAKRLFKDILKERPL 213
+ G L+ A+ F IL + +
Sbjct: 85 V-GVLAAARSCFTSILMDHSV 104
>gi|254295602|ref|ZP_04963060.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
gi|157805565|gb|EDO82735.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 406e]
Length = 614
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|53724807|ref|YP_102262.1| hypothetical protein BMA0453 [Burkholderia mallei ATCC 23344]
gi|52428230|gb|AAU48823.1| TPR domain protein [Burkholderia mallei ATCC 23344]
Length = 626
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 30 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 89
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 90 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 122
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 204 AHFRAAIAAEPHFVAAHFNLGNALDAISQHAQAQHAFEAALALQPRFALALFGLANTLAA 263
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 264 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 318
>gi|74149301|dbj|BAE22424.1| unnamed protein product [Mus musculus]
Length = 825
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +K+I ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|499647|gb|AAB59705.1| unknown [Mus musculus]
Length = 824
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 VPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +K+I ++ P L+R D+
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDI 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|418540145|ref|ZP_13105707.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|418546395|ref|ZP_13111614.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
gi|385362541|gb|EIF68351.1| TPR domain-containing protein [Burkholderia pseudomallei 1258a]
gi|385364697|gb|EIF70405.1| TPR domain-containing protein [Burkholderia pseudomallei 1258b]
Length = 614
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|67642936|ref|ZP_00441687.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|121599439|ref|YP_993899.1| hypothetical protein BMASAVP1_A2599 [Burkholderia mallei SAVP1]
gi|124386425|ref|YP_001026959.1| hypothetical protein BMA10229_A0970 [Burkholderia mallei NCTC
10229]
gi|126451387|ref|YP_001079753.1| hypothetical protein BMA10247_0177 [Burkholderia mallei NCTC 10247]
gi|166999704|ref|ZP_02265538.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
gi|254177047|ref|ZP_04883704.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|254208928|ref|ZP_04915276.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
gi|254360018|ref|ZP_04976288.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
gi|121228249|gb|ABM50767.1| TPR domain protein [Burkholderia mallei SAVP1]
gi|124294445|gb|ABN03714.1| TPR domain protein [Burkholderia mallei NCTC 10229]
gi|126244257|gb|ABO07350.1| tetratricopeptide repeat protein [Burkholderia mallei NCTC 10247]
gi|147750804|gb|EDK57873.1| tetratricopeptide repeat protein [Burkholderia mallei JHU]
gi|148029258|gb|EDK87163.1| tetratricopeptide repeat protein [Burkholderia mallei 2002721280]
gi|160698088|gb|EDP88058.1| TPR domain protein [Burkholderia mallei ATCC 10399]
gi|238524157|gb|EEP87592.1| TPR domain protein [Burkholderia mallei GB8 horse 4]
gi|243064201|gb|EES46387.1| tetratricopeptide repeat protein [Burkholderia mallei PRL-20]
Length = 614
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAISQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|424903282|ref|ZP_18326795.1| TPR domain protein [Burkholderia thailandensis MSMB43]
gi|390931155|gb|EIP88556.1| TPR domain protein [Burkholderia thailandensis MSMB43]
Length = 614
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + L P + +AL + ++GR++EA + V R +++ PN+ +L
Sbjct: 18 DDAEHGYRAALATNPADADALHLFGVLRHQQGRHEEAADLVGRAVELRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ +G+L A F++ L P A ++LG
Sbjct: 78 AFKALGRLDEAIERFRNALTLAPEFPLAHYNLG 110
>gi|115350204|ref|YP_772043.1| hypothetical protein Bamb_0148 [Burkholderia ambifaria AMMD]
gi|115280192|gb|ABI85709.1| TPR repeat-containing protein [Burkholderia ambifaria AMMD]
Length = 619
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E ++ ++L+ EPR+ +AL ++ + GR EA E + I+I+P+ + L +
Sbjct: 49 EAETLYRRILDAEPRHADALHLLGLIGHQYGRYHEATELIMAAIEIKPDATYYYNLGNVM 108
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ + + A F+ ++ RP + A ++LG
Sbjct: 109 -QANNRPAAAAECFRLAIELRPGYVDAYNNLG 139
>gi|239915965|ref|NP_033402.2| intraflagellar transport protein 88 homolog [Mus musculus]
gi|148704224|gb|EDL36171.1| intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 825
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +K+I ++ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|126442191|ref|YP_001059924.1| hypothetical protein BURPS668_2906 [Burkholderia pseudomallei 668]
gi|126221684|gb|ABN85190.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 668]
Length = 614
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + +L P + +AL + ++GR++EA + V R + + PN+ +L
Sbjct: 18 DDAEHGYRAVLAANPADADALHLFGVLRHQQGRHEEAADLVGRAVGLRPNDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDDAIERFRNALTLAPAFPLAHYNLG 110
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|323452044|gb|EGB07919.1| hypothetical protein AURANDRAFT_10223 [Aureococcus anophagefferens]
Length = 615
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
++A+ F +R I+P EV+W+L+ CY MG A L++ + E P
Sbjct: 550 EKAIHFFERASQIQPKEVKWRLMVTSCYRRMGNYQRALELYEKVHAEHP 598
>gi|389593333|ref|XP_003721920.1| putative intraflagellar transport protein IFT88 [Leishmania major
strain Friedlin]
gi|321438422|emb|CBZ12177.1| putative intraflagellar transport protein IFT88 [Leishmania major
strain Friedlin]
Length = 811
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F +R I+P EV+W+L+ A C+ G AKRL++ + + P
Sbjct: 629 KAVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQVHRRYP 676
>gi|171320362|ref|ZP_02909402.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
gi|171094409|gb|EDT39473.1| TPR repeat-containing protein [Burkholderia ambifaria MEX-5]
Length = 598
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E ++ ++L+ EPR+ +AL ++ + GR EA E + I+I+P+ + L +
Sbjct: 28 EAETLYRRILDAEPRHADALHLLGLIGHQYGRYHEATELIMAAIEIKPDATYYYNLGNVM 87
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ + + A F+ ++ RP + A ++LG
Sbjct: 88 -QANNRPAAAAECFRLAIELRPGYVDAYNNLG 118
>gi|342185286|emb|CCC94769.1| putative intraflagellar transport protein IFT88, partial
[Trypanosoma congolense IL3000]
Length = 796
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F R I+P EV+W+L+ A C+ G AKRL++ + ++ P
Sbjct: 639 KAIQFFDRASQIQPQEVKWQLMVASCHRRRGDYVQAKRLYEALHRKHP 686
>gi|341885446|gb|EGT41381.1| hypothetical protein CAEBREN_24821 [Caenorhabditis brenneri]
Length = 661
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL----- 213
RRGR +EA++F ++ I +EP V+ ALCY ++G+ A F L P
Sbjct: 507 RRGRLEEAIQFYQKAIRMEPKFVDAIASVALCYAVLGRTDRATEFFNRALAIDPFNEIIR 566
Query: 214 --LLRALHDL-GRYVSMTLQIQSLF 235
+ + +H GRY I S F
Sbjct: 567 QCMAKMIHSCRGRYDVEARTIPSGF 591
>gi|198420279|ref|XP_002129474.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) isoform 1 [Ciona intestinalis]
Length = 833
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
++A+++ +R I+PNEV+W+L+ A CY G A +K I + P + L L R
Sbjct: 649 EKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEKYKQIHGKFPDNIECLKYLNR 708
Query: 224 YVS 226
S
Sbjct: 709 LCS 711
>gi|186475487|ref|YP_001856957.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
gi|184191946|gb|ACC69911.1| TPR repeat-containing protein [Burkholderia phymatum STM815]
Length = 615
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 50/99 (50%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + L+ +P +V+AL ++ ++G+++EA + V+R D+ P + +L
Sbjct: 18 DDAERGYRATLDLDPAHVDALHLLGVLRHQQGQHEEAADLVRRAADLRPQDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMT 228
+ +G+L A F++ L P A ++LG ++
Sbjct: 78 ALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALA 116
>gi|389601777|ref|XP_001565882.2| putative intraflagellar transport protein IFT88 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|322505183|emb|CAM45400.2| putative intraflagellar transport protein IFT88 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 810
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 166 ALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P
Sbjct: 630 AVQFFERASHIQPQEVKWQLMVASCHRRRGDYVQAKRLYEQLHRKYP 676
>gi|348538308|ref|XP_003456634.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Oreochromis niloticus]
Length = 846
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P +A L E D KS+ + + + P N++ ++ + + ++A+++
Sbjct: 582 PTDAQALAKLGELHDGEGDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQY 641
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
+R I+P +V+W+L+ A CY G A +K+I ++ P + L L R +
Sbjct: 642 FERATLIQPTQVKWQLMVASCYRRSGNSQKALETYKEIHRKFPENVECLRFLVRLCT 698
>gi|334132938|ref|ZP_08506693.1| PEP-CTERM system TPR-repeat lipoprotein [Methyloversatilis
universalis FAM5]
gi|333441848|gb|EGK69820.1| PEP-CTERM system TPR-repeat lipoprotein [Methyloversatilis
universalis FAM5]
Length = 916
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 44/76 (57%)
Query: 137 EKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196
++++++EP ++ AL ++ M R EA++ V++ + +EP +E + + + G
Sbjct: 624 KRIVDREPGSLPALLMLAATQMSGKRESEAIQTVRKALVVEPESLEAQNMMIAIHRSRGA 683
Query: 197 LSTAKRLFKDILKERP 212
L A R+ +D+ ++RP
Sbjct: 684 LDDALRVARDVQRQRP 699
>gi|407462460|ref|YP_006773777.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
AR1]
gi|407046082|gb|AFS80835.1| O-linked GlcNAc transferase [Candidatus Nitrosopumilus koreensis
AR1]
Length = 366
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 124 DALMGKS----EVEEM------FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRL 173
DAL GK E++E F +LE EP N+EAL + + N+ +N ++ + +++
Sbjct: 189 DALNGKGKIFFELDEYEKSRIAFTAVLESEPENIEALLGLSELNLHEHKNIKSQQMYEKI 248
Query: 174 IDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ I+P+ +E + +A +GK A F + L+ P
Sbjct: 249 LSIDPDNIEALIGKASVLVELGKFDEALEYFDEALEVDP 287
>gi|392347771|ref|XP_342789.4| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
isoform 2 [Rattus norvegicus]
Length = 942
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S EE + + L+ R E L + GR+KEALE
Sbjct: 707 PSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVA-RTAEVLSPLGALYYNTGRHKEALEV 765
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ + ++P++ + +L A +MG+ A+++ I+ E P L
Sbjct: 766 YREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLEC 813
>gi|186683043|ref|YP_001866239.1| hypothetical protein Npun_F2761 [Nostoc punctiforme PCC 73102]
gi|186465495|gb|ACC81296.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 327
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 29/164 (17%)
Query: 77 IMKVLKEKAVI-FLAGSVI-FLGSFGSNLRPSVALPGKMRASENLKEKRDALMG---KSE 131
I++V+ AV+ F+ SVI +G+F N PS +++N R L KS+
Sbjct: 39 IVQVVLALAVLAFVGVSVIPIIGAF--NNTPS--------SNQNTASTRGTLPSADQKSK 88
Query: 132 VEE---MFEKLLEKEPRNVEALKVVMQGNMRRGRNKE-----------ALEFVKRLIDIE 177
+E+ +E +L++EP N ALK ++Q ++ KE +E +++L +
Sbjct: 89 LEDEVRGYELVLQREPENQTALKGLLQARLQLLSQKEKSEVKPADIQVVIEPLEKLAKLN 148
Query: 178 PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
P + E+ +L A + +G A + ++ IL +P L+AL +
Sbjct: 149 PEQSEYSVLLAQAKQQIGDREGAAQAYRAILSTKPGDLKALQGM 192
>gi|146338444|ref|YP_001203492.1| O-linked N-acetylglucosamine transferase [Bradyrhizobium sp. ORS
278]
gi|146191250|emb|CAL75255.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family;
TPR domain protein [Bradyrhizobium sp. ORS 278]
Length = 742
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
++ + + K+L+K P + AL + + ++ EA +KR + +EP VE + +A+
Sbjct: 43 AKAQAGYRKILKKRPNHFGALYQLGLSEHQSRKSDEAERLLKRALLVEPRSVEARYARAV 102
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
+ + S A F D+L +P L A + G+ +S
Sbjct: 103 VLSALQRDSEALSCFDDLLALKPDLFDAHLERGKLLS 139
>gi|109474510|ref|XP_001075561.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Rattus norvegicus]
Length = 942
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S EE + + L+ R E L + GR+KEALE
Sbjct: 707 PSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVA-RTAEVLSPLGALYYNTGRHKEALEV 765
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ + ++P++ + +L A +MG+ A+++ I+ E P L
Sbjct: 766 YREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLEC 813
>gi|404482681|ref|ZP_11017906.1| hypothetical protein HMPREF1135_00966 [Clostridiales bacterium
OBRC5-5]
gi|404343771|gb|EJZ70130.1| hypothetical protein HMPREF1135_00966 [Clostridiales bacterium
OBRC5-5]
Length = 445
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
EM K+ ++ P+ L V G R G A+ + + I P+ VE K +AL Y+
Sbjct: 356 EMAPKMRDEGPK---LLLKVADGLNRSGDFAGAIGYYDAALRISPDYVEAKYKKALAYKT 412
Query: 194 MGKLSTAKRLFKDILKERP 212
MG + TA LF +I+ P
Sbjct: 413 MGDVDTANNLFTEIITNYP 431
>gi|206890955|ref|YP_002249256.1| TPR domain protein, [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742893|gb|ACI21950.1| TPR domain protein, putative [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 542
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%)
Query: 139 LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198
+L+++ N++AL+V+ ++ + KEA+E ++++ PN++E Y + G
Sbjct: 72 VLKEDTENIDALQVLASVYVKEKKVKEAIEVYEKILQQSPNKIEMLSKIGNLYLISGMYD 131
Query: 199 TAKRLFKDILKERPLLLRALHDLG 222
A FK ILKE + ALH LG
Sbjct: 132 KAIETFKKILKEDSENIMALHFLG 155
>gi|390566665|ref|ZP_10247021.1| TPR repeat-containing protein [Burkholderia terrae BS001]
gi|389941374|gb|EIN03147.1| TPR repeat-containing protein [Burkholderia terrae BS001]
Length = 615
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + LE +P +V+AL ++ ++G+++EA + V+R D+ P + +L
Sbjct: 18 DDAERDYRATLELDPVHVDALHLLGVLCHQQGQHEEAADLVRRAADLRPQDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMT 228
+ +G+L A F++ L P A ++LG ++
Sbjct: 78 ALKALGRLDQAIERFRNALTLAPTFPMAHYNLGNAYALA 116
>gi|348538306|ref|XP_003456633.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Oreochromis niloticus]
Length = 824
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 55/117 (47%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P +A L E D KS+ + + + P N++ ++ + + ++A+++
Sbjct: 582 PTDAQALAKLGELHDGEGDKSQAFQYYYESFRYFPSNIDVIEWLGAYYIETQFCEKAIQY 641
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
+R I+P +V+W+L+ A CY G A +K+I ++ P + L L R +
Sbjct: 642 FERATLIQPTQVKWQLMVASCYRRSGNSQKALETYKEIHRKFPENVECLRFLVRLCT 698
>gi|78060202|ref|YP_366777.1| hypothetical protein Bcep18194_C7089 [Burkholderia sp. 383]
gi|77964752|gb|ABB06133.1| hypothetical protein Bcep18194_C7089 [Burkholderia sp. 383]
Length = 551
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP-NEVEWKLLQALCYE 192
++F L E+ PR+ ALK + +R+G+ +ALE +R I P + V W+ LC+
Sbjct: 50 DLFHVLFERYPRSDVALKSCLDALLRQGQAGKALEACERAIAATPESTVPWRERALLCFN 109
Query: 193 LMGKLSTAKRLFKDILKERP 212
+ + A KD L P
Sbjct: 110 HLNDPAAAIASLKDGLAAFP 129
>gi|337266837|ref|YP_004610892.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
gi|336027147|gb|AEH86798.1| sulfotransferase [Mesorhizobium opportunistum WSM2075]
Length = 593
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Query: 95 FLGSFGSNLR----PSVAL----------PGKMRASENLKEKRDALMGKSEVEEMFEKLL 140
FL +FG+ +R P+ A+ P ++ A +NL + E EE++ +
Sbjct: 115 FLNNFGTVMRDLGRPAAAIDFFRGAVDLRPDQLAARDNLGSSLKQVGQFEEAEEIYRGTV 174
Query: 141 EKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM--GKLS 198
+ P +V A + + GR EAL + I P + + LL L LM GKL
Sbjct: 175 ARNPFHVRARIGLAETLQEAGRLDEALAVFSEALTIRPKDAD--LLHGLGVGLMEKGKLD 232
Query: 199 TAKRLFKDILKERPLLLRA 217
A LF+ L P + A
Sbjct: 233 EAADLFRQALAVNPGMATA 251
>gi|126452464|ref|YP_001067211.1| hypothetical protein BURPS1106A_2967 [Burkholderia pseudomallei
1106a]
gi|167846787|ref|ZP_02472295.1| tetratricopeptide repeat protein [Burkholderia pseudomallei B7210]
gi|242314115|ref|ZP_04813131.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|403519633|ref|YP_006653767.1| hypothetical protein BPC006_I3003 [Burkholderia pseudomallei
BPC006]
gi|126226106|gb|ABN89646.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106a]
gi|242137354|gb|EES23756.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 1106b]
gi|403075276|gb|AFR16856.1| TPR repeat-containing protein [Burkholderia pseudomallei BPC006]
Length = 614
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|301617155|ref|XP_002938005.1| PREDICTED: intraflagellar transport protein 88 homolog [Xenopus
(Silurana) tropicalis]
Length = 826
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 583 VPTDAHTLAKLGELYDNEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A CY G A +K+I K+ P L+R D+
Sbjct: 643 YFERASLIQPTQVKWQLMVASCYRRSGNYQKALDTYKEIHKKFPDNVECLRFLVRLCTDI 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|167829957|ref|ZP_02461428.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 9]
gi|226197877|ref|ZP_03793451.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
gi|225930065|gb|EEH26078.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
Pakistan 9]
Length = 614
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|407408643|gb|EKF32001.1| intraflagellar transport protein IFT88, putative [Trypanosoma cruzi
marinkellei]
Length = 846
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P
Sbjct: 693 KAVQFFERASQIQPLEVKWQLMVASCHRRRGDYMQAKRLYEAVYRKYP 740
>gi|394987155|gb|AFN42835.1| intraflagellar transport protein 88-like protein [Marsilea vestita]
Length = 486
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 176 IEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
I+PNEV+W+LL A CY +G S A K+IL P L L
Sbjct: 345 IQPNEVKWQLLVAYCYRRIGSYSAAIAKHKEILVHHPNNLECL 387
>gi|254250927|ref|ZP_04944245.1| hypothetical protein BDAG_00091 [Burkholderia dolosa AUO158]
gi|124893536|gb|EAY67416.1| hypothetical protein BDAG_00091 [Burkholderia dolosa AUO158]
Length = 759
Score = 40.8 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E ++ ++LE EPR+ +AL ++ + GR EA E + I+I P+ + + L +
Sbjct: 189 EAETLYRRILEVEPRHADALHLLGLIGHQYGRYHEASELIMAAIEIRPDAIYYYNLGNV- 247
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ + + A F+ L+ +P + A ++LG
Sbjct: 248 MQAHNRPAAAAECFRLALELKPDYVDAYNNLG 279
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 126 LMGKSEVEEMFEK--LLEKEP---RNVEALKVVMQGNMRRGRNKEALEFVKRLI--DIEP 178
L G +V EM E LLE P RN + V+ G R GR EA+E +R++ +++P
Sbjct: 189 LAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDP 248
Query: 179 NEVEWKLLQALCYELMGKLSTAKRL 203
+EV + + C +L G L +R+
Sbjct: 249 DEVTLLAVLSACADL-GSLELGERI 272
>gi|240254442|ref|NP_178674.6| protein early flowering 8 [Arabidopsis thaliana]
gi|207079706|tpd|FAA00428.1| TPA: VERNALIZATION INDEPENDENCE 6 [Arabidopsis thaliana]
gi|330250911|gb|AEC06005.1| protein early flowering 8 [Arabidopsis thaliana]
Length = 1091
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 126 LMGKSEVE---EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EV 181
L+ K E++ + F+ +L+ P NV AL RGR E+L+ KR + + P
Sbjct: 138 LLAKGEIDNALQAFKIVLDTAPDNVPALLGQASVEFNRGRFSESLQLYKRALQVFPGCPA 197
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+L LC +G+L A++ F +L+ P + AL LG
Sbjct: 198 AVRLGIGLCRYKLGQLDKARQAFDRVLQLDPDNVEALVALG 238
>gi|237813335|ref|YP_002897786.1| hypothetical protein GBP346_A3104 [Burkholderia pseudomallei
MSHR346]
gi|237504254|gb|ACQ96572.1| tetratricopeptide repeat protein [Burkholderia pseudomallei
MSHR346]
Length = 614
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|407465603|ref|YP_006776485.1| hypothetical protein NSED_08755 [Candidatus Nitrosopumilus sp. AR2]
gi|407048791|gb|AFS83543.1| hypothetical protein NSED_08755 [Candidatus Nitrosopumilus sp. AR2]
Length = 233
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 48 QKFHSLFITNLSQSHIAKIPRSSLSPENKIMKVLK----EKAVIFLAGSVIFLGSFGSNL 103
QK+ ++ ++ + KIP ++ +N + ++ ++A+I+ + S
Sbjct: 18 QKYDEMY--EYCKNLLEKIPNDMVALQNISLSLIYLQKFDEAIIYCDKVLKIKNS----- 70
Query: 104 RPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN 163
+ AL K+ A ENLK+ L E+ +K+L+ +P+++ AL + R+
Sbjct: 71 -DTYALKNKIYALENLKQHEKVL-------ELCQKILDVDPKDIWALNSMGLSLNELNRH 122
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA------KRLFKDILKERPL 213
+ ALE+ ++ I+PN+V + +A+ +GK A ++ LKE PL
Sbjct: 123 QNALEYYDTVLLIDPNDVTALMNKAISLSHLGKYKDAISYYDMAQVIDSNLKEIPL 178
>gi|167919999|ref|ZP_02507090.1| tetratricopeptide repeat protein [Burkholderia pseudomallei BCC215]
Length = 614
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
RGR+++AL +R + ++P+ V L + +G A R F L+ P
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDP 304
>gi|167903761|ref|ZP_02490966.1| TPR domain protein [Burkholderia pseudomallei NCTC 13177]
gi|167912023|ref|ZP_02499114.1| TPR domain protein [Burkholderia pseudomallei 112]
gi|217421212|ref|ZP_03452717.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|386860885|ref|YP_006273834.1| hypothetical protein BP1026B_I0779 [Burkholderia pseudomallei
1026b]
gi|418533355|ref|ZP_13099222.1| TPR domain-containing protein [Burkholderia pseudomallei 1026a]
gi|217396624|gb|EEC36641.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 576]
gi|385361390|gb|EIF67275.1| TPR domain-containing protein [Burkholderia pseudomallei 1026a]
gi|385658013|gb|AFI65436.1| TPR domain-containing protein [Burkholderia pseudomallei 1026b]
Length = 614
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL +R + ++P+ V L + +G A R F L+ P L
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 306
>gi|167895374|ref|ZP_02482776.1| tetratricopeptide repeat protein [Burkholderia pseudomallei 7894]
Length = 614
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 192 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 251
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
RGR+++AL +R + ++P+ V L + +G A R F L+ P
Sbjct: 252 RGRHRDALPHYERAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDP 304
>gi|322436089|ref|YP_004218301.1| hypothetical protein AciX9_2488 [Granulicella tundricola MP5ACTX9]
gi|321163816|gb|ADW69521.1| Tetratricopeptide TPR_1 repeat-containing protein [Granulicella
tundricola MP5ACTX9]
Length = 730
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E E F ++L+ +P+ V G RGR EAL ++ R + ++P + + L
Sbjct: 523 AEAVEAFHQVLKLDPKYQPGYVNVAVGEYSRGRYDEALRWLDRGLQMDPADARAMYFKGL 582
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227
C A + + + K+ P + +LG YV M
Sbjct: 583 CLRWQTHFDEAIAVLEPVAKQYPRFRQVHQELG-YVYM 619
>gi|145525898|ref|XP_001448763.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416323|emb|CAK81366.1| unnamed protein product [Paramecium tetraurelia]
Length = 325
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRR-GRNKEALEFVKRLIDIEPNEVEWK 184
L + E E F+K + P+N E + M +R R+KEA+E+ +I I P+++E+
Sbjct: 151 LNKQKEAELQFQKAISLNPKN-EFAQFNMANLLRECDRHKEAIEYYNHVIQINPSDIEYY 209
Query: 185 LLQALCYELMGKLSTAKRLFKDILKERP 212
+ +A C + + K A F L P
Sbjct: 210 VEKAFCLQALKKYHNAIECFNQALSLNP 237
>gi|290997550|ref|XP_002681344.1| hypothetical protein NAEGRDRAFT_63280 [Naegleria gruberi]
gi|284094968|gb|EFC48600.1| hypothetical protein NAEGRDRAFT_63280 [Naegleria gruberi]
Length = 820
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 166 ALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
AL + +R +I+PN+ +W+L+ A C+ +G L AK+ ++ I + P
Sbjct: 649 ALAYFERASEIQPNKSDWQLMVASCHRRIGNLQQAKKCYERIHNKDP 695
>gi|170698732|ref|ZP_02889797.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
gi|170136357|gb|EDT04620.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
Length = 598
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E ++ ++L+ +PR+ +AL ++ + GR +EA E + I+I+P+ + L +
Sbjct: 28 EAETLYRRILDADPRHADALHLLGLIGHQYGRYREASELIMAAIEIKPDATYYYNLGNVM 87
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ + + A F+ ++ RP + A ++LG
Sbjct: 88 -QANNRPAAAAECFRLAIELRPGYVDAYNNLG 118
>gi|146184014|ref|XP_001027584.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|146143395|gb|EAS07342.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 876
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
EEM++K++E P ++ + ++ + R ++L +K+ I++EP +V+ ++QAL Y
Sbjct: 371 AEEMYQKIIELTPNKSFSIYIYVKFLNKMNRLDDSLVQIKKAIELEPRKVKLLIMQALIY 430
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
+ +L A ++++LK P L + L +
Sbjct: 431 SSLKQLDKAYETYEEVLKINPNLQSTKYQLSQ 462
>gi|239832614|ref|ZP_04680943.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|444309662|ref|ZP_21145294.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
gi|239824881|gb|EEQ96449.1| TPR domain-containing protein [Ochrobactrum intermedium LMG 3301]
gi|443486929|gb|ELT49699.1| hypothetical protein D584_07693 [Ochrobactrum intermedium M86]
Length = 295
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 38/89 (42%)
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183
D G SE +++ PR+ E V + GR KEAL + I + PN +
Sbjct: 57 DKAQGSSENISSLTSVIQSNPRDPEGYNVRGSAYGKSGRYKEALRDFDQAIALNPNFYQA 116
Query: 184 KLLQALCYELMGKLSTAKRLFKDILKERP 212
+AL Y MG + A + + ++ P
Sbjct: 117 YANRALVYRYMGDSTRAAQDYSKAIQLNP 145
>gi|303248745|ref|ZP_07334997.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
fructosovorans JJ]
gi|302489832|gb|EFL49761.1| Tetratricopeptide TPR_2 repeat protein [Desulfovibrio
fructosovorans JJ]
Length = 1308
Score = 40.8 bits (94), Expect = 0.48, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 20/146 (13%)
Query: 67 PRSSLSPENKIMKVL-----KEKAVIFLAGSVIFLGSFGSNL---RPSVALPGKMRA--- 115
P ++ P ++ + +L K KA++ LA + LG+ + R + A PG +R+
Sbjct: 665 PAKAVEPLSRALGLLDNGPRKAKAIMTLAQAYGTLGNSQKAIAFWRQAAAAPGALRSDVA 724
Query: 116 --SENLKEKRDALMGKSEV---EEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFV 170
ENL AL G ++ E+ F + L N L + Q + GR +EAL+
Sbjct: 725 ASQENLGY---ALTGAGDLPAAEKAFRRALALSGPNWRLLSALGQIAYKTGRYQEALDDF 781
Query: 171 KRLIDIEPNEVEWKLLQALCYELMGK 196
R + + P+ ++ ALCYE +GK
Sbjct: 782 TRSLALNPDPAT-RIAMALCYEKLGK 806
>gi|295677297|ref|YP_003605821.1| hypothetical protein BC1002_2251 [Burkholderia sp. CCGE1002]
gi|295437140|gb|ADG16310.1| TPR repeat-containing protein [Burkholderia sp. CCGE1002]
Length = 628
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+ E + L+ P +V+AL ++ ++G++ EA V+R +D+ P + +L
Sbjct: 31 DDAERGYRATLDHNPSHVDALHLLGVLRHQQGQHAEAAALVRRAVDLRPEDAALQLNLGN 90
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGR-YVSM 227
+ +G++ A F++ L P A ++LG Y S+
Sbjct: 91 ALKALGQIDAAIEQFRNALTLAPTFPMAHYNLGNAYASL 129
>gi|21228822|ref|NP_634744.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
gi|20907343|gb|AAM32416.1| hypothetical protein MM_2720 [Methanosarcina mazei Go1]
Length = 1129
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 116 SENLKEKRDALMGKSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKR 172
SE L+ K AL +E F LLE EP NVEAL+ R GR + ALE
Sbjct: 744 SEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALARSGRPEAALEDYDV 803
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
++ ++P + +A E +G+ A + +IL+ P
Sbjct: 804 IMKLDPTNSKALSEKASLLEELGRYDEAASTYGEILEITP 843
>gi|356548160|ref|XP_003542471.1| PREDICTED: uncharacterized protein LOC100812214 [Glycine max]
Length = 329
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205
+ +AL+ ++Q +R EA+ + RL ++EP E E+ LL+A + G+ A +F+
Sbjct: 127 DTDALQSLLQTKIRALEINEAIRVLDRLTELEPEESEYPLLKAHLHMRYGEHELAANVFE 186
Query: 206 DILKERPLLLRALHDLGRYVSMT 228
++L P + A L S T
Sbjct: 187 ELLHRDPFHVEAYRGLLMLTSET 209
>gi|328768058|gb|EGF78105.1| hypothetical protein BATDEDRAFT_13321 [Batrachochytrium
dendrobatidis JAM81]
Length = 709
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++A++F +R I I+PN+V W L+ A CY G A +K I ++ P L+R
Sbjct: 547 EQAIQFFERAILIQPNQVRWPLMIASCYRRSGNYQQAFDTYKRIHEKFPDNIECLRFLVR 606
Query: 217 ALHDLG 222
DLG
Sbjct: 607 ICTDLG 612
>gi|21226280|ref|NP_632202.1| hypothetical protein MM_0178 [Methanosarcina mazei Go1]
gi|20904523|gb|AAM29874.1| conserved protein [Methanosarcina mazei Go1]
Length = 1711
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 49/92 (53%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E + FEK P+N EAL ++ R +E+L + R+++I P+ ++ + +
Sbjct: 1506 EALKAFEKAALFNPKNEEALYNAATTLIKLNRAQESLGYFDRILEISPDNLDVLNYKGVI 1565
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ ++ + A R F +LK P ++A++++G
Sbjct: 1566 FCMLDQYREALRAFDGVLKRDPENIKAIYNVG 1597
>gi|334116746|ref|ZP_08490838.1| MCP methyltransferase, CheR-type [Microcoleus vaginatus FGP-2]
gi|333461566|gb|EGK90171.1| MCP methyltransferase, CheR-type [Microcoleus vaginatus FGP-2]
Length = 555
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205
N +A ++ Q + G +A+E+ R ++P V LQA E G+L TAK L K
Sbjct: 418 NFDAYFLIAQVHANAGNYSQAIEYCNRARKVDPGSVLTDYLQAHIAEEQGQLETAKNLLK 477
Query: 206 DILKERPLLLRALHDLG 222
+ P + A +LG
Sbjct: 478 RTIYMCPSFVSAYIELG 494
>gi|452211222|ref|YP_007491336.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
gi|452101124|gb|AGF98064.1| hypothetical protein MmTuc01_2778 [Methanosarcina mazei Tuc01]
Length = 1085
Score = 40.4 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 116 SENLKEKRDALMGKSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKR 172
SE L+ K AL +E F LLE EP NVEAL+ R GR + ALE
Sbjct: 700 SEALQGKSLALASLGRYDEAVACFNPLLELEPENVEALEGRAFALARSGRPEAALEDYDV 759
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
++ ++P + +A E +G+ A + +IL+ P
Sbjct: 760 IMKLDPTNSKALAEKASLLEELGRYDEAALTYGEILEITP 799
>gi|23095913|dbj|BAC16228.1| putative TPR-containing nuclear phosphoprotein [Oryza sativa
Japonica Group]
Length = 1069
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN------EVEWKLLQAL 189
FEK+LE P N E+LK + + G N +A+E K++ I+P E+ L+Q+
Sbjct: 375 FEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTRIDPKDHQAFMELGELLVQSD 434
Query: 190 CYELMGKLSTAKRLFKDILKERPLLL 215
M L TA+ L K ++ P+ L
Sbjct: 435 WATAMEYLKTARNLLKKAGEKIPIEL 460
>gi|253700409|ref|YP_003021598.1| hypothetical protein GM21_1786 [Geobacter sp. M21]
gi|251775259|gb|ACT17840.1| TPR repeat-containing protein [Geobacter sp. M21]
Length = 190
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 71 LSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKS 130
+S EN ++ V V L G +IF + NL + A+P + + + +
Sbjct: 1 MSKEN-LLTVAVALIVGMLGGYIIFNVAGNKNLPSNAAVPQGAGSPTDYQRRI------- 52
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
VE EK++ +EP+N++A + + ++A+ ++++++PN V Q +
Sbjct: 53 -VEA--EKIVAQEPKNLQAWAQLGNDYFDTDQPQKAVNAYAKVLELDPNNVNVMTDQGIM 109
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230
Y +G A F+ + P L++L++LG M L+
Sbjct: 110 YRKIGWYDKAIANFEKAQQIDPKHLQSLYNLGVVYYMDLK 149
>gi|172036073|ref|YP_001802574.1| hypothetical protein cce_1158 [Cyanothece sp. ATCC 51142]
gi|354552876|ref|ZP_08972183.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
gi|171697527|gb|ACB50508.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554706|gb|EHC24095.1| Tetratricopeptide TPR_1 repeat-containing protein [Cyanothece sp.
ATCC 51472]
Length = 285
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL +++ +R+G + A+ +KRL + P E ++ +L A + +
Sbjct: 61 YQLVLEREPDNENALLGLLETRLRQGNLEAAIAPLKRLAQLNPQEPDYAILLAQSQQQLN 120
Query: 196 KLSTAKRLFKDILKERPLLLRAL 218
A +++++ P +RAL
Sbjct: 121 NYQEAFNTYQEVIAANPGDMRAL 143
>gi|410671343|ref|YP_006923714.1| TPR repeat-containing protein [Methanolobus psychrophilus R15]
gi|409170471|gb|AFV24346.1| TPR repeat-containing protein [Methanolobus psychrophilus R15]
Length = 1065
Score = 40.4 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 44/89 (49%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F+K+LE + NV L + + G +A+ + +R+++I P++ E + YE
Sbjct: 807 ESFDKVLEHDNSNVTVLMYQSMSSAQMGNYGKAIGYNERILEIHPDDTEVLFIMGTTYEK 866
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLG 222
G+ A ++ IL+ P +A + G
Sbjct: 867 AGQYPMAIEVYDRILELEPENTKAWNQKG 895
>gi|339492897|ref|YP_004713190.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338800269|gb|AEJ04101.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 733
Score = 40.4 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
G+FGS LRP LP + A+ LK + + ++MF PR V+ LK+ G
Sbjct: 237 GAFGSGLRPQYQLPLAVMAALKLKASVRVELTR---QQMFT--FGYRPRTVQQLKLAADG 291
Query: 157 NMR-RGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
+ R + A+ R D +EVEW + C
Sbjct: 292 DGRLQAIEHRAIGQTSRFEDFTEHEVEWSGMLYAC 326
>gi|86607679|ref|YP_476441.1| hypothetical protein CYB_0178 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556221|gb|ABD01178.1| TPR domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 274
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 30/154 (19%)
Query: 72 SPENKIMKVLKEKAVIFLAGSVIFLG-SFG---SNLRPSVALPGKMRASENLKEKRDALM 127
SP K++ +L + + G+V FLG SFG L PS + P +E L+ + D
Sbjct: 9 SPARKLLNIL-----LLVVGTVTFLGFSFGPLFQALGPSES-PEASLVTEQLRAQADG-- 60
Query: 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187
+ +LE+EP N AL+ ++ ++ + A+E +K+L+++EP E + L+
Sbjct: 61 --------YRVVLEREPDNPIALRGLIDTQLQLNEPQGAIEPLKKLVELEP---ENRQLR 109
Query: 188 ALCYELM-------GKLSTAKRLFKDILKERPLL 214
A E+ G L + L++ K+R +L
Sbjct: 110 AFLAEIQQDTGDFEGALEQLQILYEGDPKDRQVL 143
>gi|357404246|ref|YP_004916170.1| hypothetical protein MEALZ_0882 [Methylomicrobium alcaliphilum 20Z]
gi|351716911|emb|CCE22576.1| exported protein of unknown function [Methylomicrobium alcaliphilum
20Z]
Length = 555
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE-PNEVE 182
D + EV ++ + + +P N +A M+R RNKEALE K+ ID E P++V
Sbjct: 279 DDIRKDKEVIDLLNEAVAIDPNNFQARIYKTTYLMKRNRNKEALELAKK-IDTELPSQVI 337
Query: 183 WKLLQALCYELMGKLSTA 200
KLLQ Y M + A
Sbjct: 338 GKLLQGDIYFAMSQYDKA 355
>gi|434394224|ref|YP_007129171.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
gi|428266065|gb|AFZ32011.1| Tetratricopeptide TPR_1 repeat-containing protein [Gloeocapsa sp.
PCC 7428]
Length = 766
Score = 40.4 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVV-MQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
S+ + ++++L +EP N ALK V + G+ R +E + L+ + PN+ E + +A
Sbjct: 89 SDAWDTYQQVLAQEPNNQLALKSVGLLGSYRPDWQASGIEALTTLLSLNPNDTEARAQRA 148
Query: 189 LCYELMGKLSTAKRLFKDILKERP 212
L Y G+ + A ++ +L P
Sbjct: 149 LLYGYQGRFAEALADYQTVLANNP 172
>gi|386019499|ref|YP_005937523.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri DSM 4166]
gi|327479471|gb|AEA82781.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri DSM 4166]
Length = 733
Score = 40.4 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
G+FGS LRP LP + A+ LK A+ + ++MF PR V+ LK+ G
Sbjct: 237 GAFGSGLRPQYQLPLAVMAALKLKA---AVRVELTRQQMFT--FGYRPRTVQQLKLAADG 291
Query: 157 NMR-RGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
+ R + A+ R D +EVEW + C
Sbjct: 292 DGRLQAIEHRAIGQTSRFEDFTEHEVEWSGMLYAC 326
>gi|296131704|ref|YP_003638951.1| hypothetical protein TherJR_0159 [Thermincola potens JR]
gi|296030282|gb|ADG81050.1| Tetratricopeptide TPR_2 repeat protein [Thermincola potens JR]
Length = 187
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 22/154 (14%)
Query: 73 PENKIMKVLKEKAVIFLAGSV-IFLGSFGSNLRPS---VALPGKMRASEN--LKEKRDAL 126
P ++ VL I L GSV I +F S S VA G A N + D L
Sbjct: 9 PNKIVLYVLVAMISIGLLGSVSIGFWAFSSGSYSSGTAVANNGSSEAKGNAYFSQAMDKL 68
Query: 127 MGKSEVEEM----------FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176
+ K++VE +EK L++ P+N L + G +A+E VK+ ++I
Sbjct: 69 LAKNDVEGAQKLFKDAIVEYEKALKETPQNKLVLGDLATAYFYTGNTDKAIELVKQALNI 128
Query: 177 EPNEVEWKLLQALCYELMGKLSTAKRLFKDILKE 210
+PN + + A+ L+ K+ + D +KE
Sbjct: 129 DPNFTQARFNYAIY------LADGKQQYMDAIKE 156
>gi|47221980|emb|CAG08235.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++A+++ +R I+PNEVEW+L A CY G A +K+ + P L+R
Sbjct: 298 EKAIKYFERATLIQPNEVEWRLRVAGCYRRSGNYHAALETYKETHGKFPEDIECLTFLVR 357
Query: 217 ALHDLG 222
+D+G
Sbjct: 358 LTNDMG 363
>gi|408381549|ref|ZP_11179098.1| EIF-4a family ATP-dependent RNA helicase [Methanobacterium
formicicum DSM 3637]
gi|407816016|gb|EKF86579.1| EIF-4a family ATP-dependent RNA helicase [Methanobacterium
formicicum DSM 3637]
Length = 938
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 97 GSFGSNLRPSVALPG--KMRASENLKEKRDA--LMGK-SEVEEMFEKLLEKEPRNVEALK 151
GSF S P++ G + ENL K ++ L G +E F+K+LE + N+ ALK
Sbjct: 772 GSFKS---PAMGSEGYQEFENPENLNRKGESFYLNGNLNEAARCFQKVLEMDENNISALK 828
Query: 152 VVMQGNM--RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILK 209
QG + ++ + ++ALEF ++++ I+ ++ E QA+ + + + +K + +LK
Sbjct: 829 --YQGIILAKQEKPEKALEFFEKVLLIQSDDPETLYYQAVLFNETEQYAESKNISMKLLK 886
Query: 210 ERP-------LLLRALHDLG 222
RP +L ALH LG
Sbjct: 887 ARPDWDDAWSVLAIALHALG 906
>gi|330508318|ref|YP_004384746.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929126|gb|AEB68928.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 485
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E + + +E EP N +A + ++ R E+LE+ R I+I+P+E+ ++ +AL
Sbjct: 302 EAYNRTVELEPGNSDAWNGLAISHVEMERYNESLEWFDRAIEIDPDEIGFQYNKALALNK 361
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLG 222
+G S + +++ P ++LG
Sbjct: 362 LGNYSEEVAVLNRTVEQHPDCAVCWNNLG 390
>gi|172059226|ref|YP_001806878.1| hypothetical protein BamMC406_0161 [Burkholderia ambifaria MC40-6]
gi|171991743|gb|ACB62662.1| TPR repeat-containing protein [Burkholderia ambifaria MC40-6]
Length = 598
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E ++ ++L+ +PR+ +AL ++ + GR EA E + I+I+P+ + L +
Sbjct: 28 EAETLYRRILDADPRHADALHLLGLIGHQYGRYHEATELIMAAIEIKPDATYYYNLGNVM 87
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ + + A F+ ++ RP + A ++LG
Sbjct: 88 -QANNRPAAAAECFRLAIELRPGYVDAYNNLG 118
>gi|71411439|ref|XP_807969.1| intraflagellar transport protein IFT88 [Trypanosoma cruzi strain CL
Brener]
gi|70872077|gb|EAN86118.1| intraflagellar transport protein IFT88, putative [Trypanosoma
cruzi]
Length = 213
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 166 ALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P + L
Sbjct: 61 AIQFFERASQIQPLEVKWQLMVASCHRRRGDYIQAKRLYEAVYRKYPENMECL 113
>gi|333987314|ref|YP_004519921.1| hypothetical protein MSWAN_1100 [Methanobacterium sp. SWAN-1]
gi|333825458|gb|AEG18120.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanobacterium
sp. SWAN-1]
Length = 197
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 127 MGKS----EVEEMFEKLLEKEPRNVEAL--KVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
+GKS E E F+K+L+ +P+NV AL K V G + G+ +EAL++ ++++++P
Sbjct: 21 LGKSGKYKEAIECFDKVLKIDPKNVRALDNKGVTYGLL--GKAQEALDYFDKVLELDPKN 78
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
E + L +E +GK A + + L+ P
Sbjct: 79 AEAWNNKGLAFEDIGKYQEAIKSYDKSLELDP 110
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 110 PGKMRASENLKEKRDALMGKS-EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
P +RA +N K L+GK+ E + F+K+LE +P+N EA G+ +EA++
Sbjct: 42 PKNVRALDN-KGVTYGLLGKAQEALDYFDKVLELDPKNAEAWNNKGLAFEDIGKYQEAIK 100
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ ++++PN E + + + + K A + F LK P + A ++ G
Sbjct: 101 SYDKSLELDPNNSETWYNKGISLKKLEKYQEALKSFNKALKSYPNYVDAWNNKG 154
>gi|307721681|ref|YP_003892821.1| hypothetical protein Saut_1765 [Sulfurimonas autotrophica DSM
16294]
gi|306979774|gb|ADN09809.1| TPR repeat-containing protein [Sulfurimonas autotrophica DSM 16294]
Length = 202
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 119 LKEKRDALMGKSEVEEMFEKLLE---KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID 175
L EK D M K ++++ E KEP+N E L + ++ R+ EALE+ K ++
Sbjct: 54 LVEKADEAMDKGDLQKALAIYSEANIKEPKNSETLFKMGYTLAQQNRDDEALEYYKEALE 113
Query: 176 IEPNEVEWKLLQALCYELMGKLSTAKR 202
++PN A Y MG+ ++A+
Sbjct: 114 LDPNNTYIHQAMASLYRKMGEYASARN 140
>gi|431928529|ref|YP_007241563.1| aerobic-type carbon monoxide dehydrogenase, large subunit
CoxL/CutL-like protein [Pseudomonas stutzeri RCH2]
gi|431826816|gb|AGA87933.1| aerobic-type carbon monoxide dehydrogenase, large subunit
CoxL/CutL-like protein [Pseudomonas stutzeri RCH2]
Length = 733
Score = 40.4 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
G+FGS LRP LP + A+ LK + + ++MF PR + LK+ G
Sbjct: 237 GAFGSGLRPQYQLPLAVMAALKLKASVRVELTR---QQMFT--FGYRPRTFQQLKLAADG 291
Query: 157 NMR-RGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
R R +A+ R D +EVEW + C
Sbjct: 292 EGRLRAIEHKAIGQTSRFEDFTEHEVEWSGMLYAC 326
>gi|449681490|ref|XP_002163424.2| PREDICTED: intraflagellar transport protein 88 homolog, partial
[Hydra magnipapillata]
Length = 557
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
++A+ + +R + ++P EV W L+ A CY G + A +K+I K+ P L D R
Sbjct: 365 EKAITYFERAVQVQPLEVRWHLMLATCYRKAGNYTQAMETYKEIHKKFPENL----DCIR 420
Query: 224 YVSMTLQIQSL 234
++ Q Q L
Sbjct: 421 FLVKLCQDQGL 431
>gi|359690298|ref|ZP_09260299.1| TPR-repeat-containing protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418751251|ref|ZP_13307537.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
gi|418758695|ref|ZP_13314877.1| hypothetical protein LEP1GSC185_0455 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114597|gb|EIE00860.1| hypothetical protein LEP1GSC185_0455 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273854|gb|EJZ41174.1| tetratricopeptide repeat protein [Leptospira licerasiae str.
MMD4847]
Length = 673
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
KRD+ + +E E FE+ + P EALK++ + + GR +EA E++ RL+ + PN
Sbjct: 229 KRDSKI--AEAAEKFERSVSLHPNEEEALKLLAKTRIYFGRYQEAEEYLNRLLTLFPNST 286
Query: 182 EWKLLQALC 190
E+ L++
Sbjct: 287 EYLYLRSYA 295
>gi|116623761|ref|YP_825917.1| hypothetical protein Acid_4673 [Candidatus Solibacter usitatus
Ellin6076]
gi|116226923|gb|ABJ85632.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 775
Score = 40.0 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 45/84 (53%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+++ ++L ++P + AL+ + ++ R EAL++ +RLI +EP + +L++
Sbjct: 403 ETQARSALVEILRRDPNHRNALRELADLEIQNQRPDEALQYAERLIALEPANIGARLVRT 462
Query: 189 LCYELMGKLSTAKRLFKDILKERP 212
+ L G + + + ++ ERP
Sbjct: 463 AAWALRGPKTEVRAELRRMIAERP 486
>gi|359460711|ref|ZP_09249274.1| TPR domain-containing protein [Acaryochloris sp. CCMEE 5410]
Length = 307
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGN---MRRG--RNKEALEFVKRLIDIEPNEVEWKL 185
++E + ++LEKEP N +AL+ + + ++ G K+ L+ +++L+++ P + ++++
Sbjct: 66 DLENGYLQILEKEPDNPDALRGLAEARSQMIKIGLKTEKDLLDPLEKLVELNPEQTQYQV 125
Query: 186 LQALCYELMGKLSTAKRLFKDILKERPLLLRALH 219
L A + GK +A + ++ IL P + AL
Sbjct: 126 LLAQTLQKTGKRESAAQTYRSILATEPGNMDALQ 159
>gi|433773574|ref|YP_007304041.1| TPR repeat-containing protein [Mesorhizobium australicum WSM2073]
gi|433665589|gb|AGB44665.1| TPR repeat-containing protein [Mesorhizobium australicum WSM2073]
Length = 544
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 85 AVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEP 144
A+ F G+V +LRP ++ A +NL + E E+++ +++ P
Sbjct: 84 AIDFFRGAV--------DLRPE-----QLAARDNLGSSLKQIGRFDEAEDIYRGTVQRNP 130
Query: 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM--GKLSTAKR 202
+V A + + GR EAL + + I P + + LL L LM GKL A
Sbjct: 131 FHVRARIGLAETLQEAGRLDEALAVFQEALTIRPRDAD--LLHGLGVGLMEKGKLDEATG 188
Query: 203 LFKDILKERPLLLRA 217
LF+ + +P + RA
Sbjct: 189 LFRQAVAIQPGMARA 203
>gi|158338828|ref|YP_001520005.1| hypothetical protein AM1_5741 [Acaryochloris marina MBIC11017]
gi|158309069|gb|ABW30686.1| TPR domain protein, putative [Acaryochloris marina MBIC11017]
Length = 307
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGN---MRRG--RNKEALEFVKRLIDIEPNEVEWKL 185
++E + ++LEKEP N +AL+ + + ++ G K+ L+ +++L+++ P + ++++
Sbjct: 66 DLENGYLQILEKEPDNPDALRGLAEARSQMIKIGLKTEKDLLDPLEKLVELNPEQTQYQV 125
Query: 186 LQALCYELMGKLSTAKRLFKDILKERPLLLRALH 219
L A + GK +A + ++ IL P + AL
Sbjct: 126 LLAQTLQKTGKRESAAQTYRSILATEPGNMDALQ 159
>gi|401424405|ref|XP_003876688.1| putative intraflagellar transport protein IFT88 [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492931|emb|CBZ28212.1| putative intraflagellar transport protein IFT88 [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 811
Score = 40.0 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F +R I+P EV+W+L+ A C+ G + AK L++ + ++ P
Sbjct: 629 KAVQFFERASHIQPQEVKWQLMVASCHRRRGDYAQAKLLYEQVHRKYP 676
>gi|73663263|ref|YP_302044.1| hypothetical protein SSP1954 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495778|dbj|BAE19099.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 478
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 129 KSEVEEMFEKLLEKEPRNVE------ALKVVMQGNMRRGRNKEALEFV-KRLIDIEPNEV 181
K E+EEMFE + P +E A++++ Q +GR EA F+ + DI+ + V
Sbjct: 118 KEELEEMFE-VSYHTPEKIETESKLFAIQLIFQYLFSQGRLPEARNFILNQSTDIQEHRV 176
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
LL A+CY + + TAK +F+ +L E + AL
Sbjct: 177 VRNLL-AMCYLYLNEYETAKEMFERLLSEDNTDVHAL 212
>gi|264676953|ref|YP_003276859.1| hypothetical protein CtCNB1_0817 [Comamonas testosteroni CNB-2]
gi|299531516|ref|ZP_07044922.1| TPR repeat protein [Comamonas testosteroni S44]
gi|262207465|gb|ACY31563.1| TPR repeat protein [Comamonas testosteroni CNB-2]
gi|298720479|gb|EFI61430.1| TPR repeat protein [Comamonas testosteroni S44]
Length = 595
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 161 GRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHD 220
G NKEA +L+ P++VE AL E G S +RL +DI+K +P A +
Sbjct: 426 GLNKEAYALQAQLLSQAPDDVELAYDTALLAERAGNFSEMERLLRDIIKRKPDFKHAYNA 485
Query: 221 LG 222
LG
Sbjct: 486 LG 487
>gi|430747186|ref|YP_007206315.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
gi|430018906|gb|AGA30620.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Singulisphaera acidiphila DSM 18658]
Length = 827
Score = 40.0 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 3/137 (2%)
Query: 96 LGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQ 155
LG+F LR P A +L E F L+ +P +++A K +
Sbjct: 58 LGAFQQTLRLQ---PDHAEAQNHLGIVWAQAGSLEEAVRCFLLTLQLQPNSLDAYKNLAV 114
Query: 156 GNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLL 215
R+GR EA+ +++++++P+ E + GK A + +L+ +P L
Sbjct: 115 TFERQGRLDEAVACDRKVVELKPDLAEAHRHLGVLLRKQGKWGEAIVALEQVLRIKPELP 174
Query: 216 RALHDLGRYVSMTLQIQ 232
L+DLG + MT Q++
Sbjct: 175 ETLNDLGLLLEMTGQLE 191
>gi|356562016|ref|XP_003549271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 705
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
R GR EALEFV R + +EPN+V W+ + C+ G+L + + K++++ P
Sbjct: 482 RAGRVNEALEFV-RAMPVEPNQVIWRSIVTACHA-RGELKLGESVAKELIRREP 533
>gi|196228571|ref|ZP_03127437.1| General secretory system II protein E domain protein
[Chthoniobacter flavus Ellin428]
gi|196226852|gb|EDY21356.1| General secretory system II protein E domain protein
[Chthoniobacter flavus Ellin428]
Length = 346
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 14/79 (17%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
EMFE + + P++ +++ ++ R G+ KEAL+ +RL D Y
Sbjct: 23 EMFEVITQANPQDCQSMDILKDAYQRVGKQKEALQVARRLAD--------------TYVE 68
Query: 194 MGKLSTAKRLFKDILKERP 212
+G+ S A ++ IL++ P
Sbjct: 69 LGQFSAAMLEYEGILQKEP 87
>gi|407847902|gb|EKG03465.1| intraflagellar transport protein IFT88, putative [Trypanosoma
cruzi]
Length = 784
Score = 40.0 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P
Sbjct: 631 KAIQFFERASQIQPLEVKWQLMVASCHRRRGDYIQAKRLYEAVHRKYP 678
>gi|427718255|ref|YP_007066249.1| hypothetical protein Cal7507_3002 [Calothrix sp. PCC 7507]
gi|427350691|gb|AFY33415.1| Tetratricopeptide TPR_1 repeat-containing protein [Calothrix sp.
PCC 7507]
Length = 292
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNM-----RRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
+E +L++EP N ALK ++Q + ++G + + +++L + P + E+ +L A
Sbjct: 66 YELVLQREPENQTALKGLLQARLQLLSQKQGDIQGVIAPLEKLAKLNPEQTEYAVLLAQA 125
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ +G A + ++ +L +P L+AL +
Sbjct: 126 KQQIGDKEGAAQAYRTVLATKPGDLKALQGM 156
>gi|37523831|ref|NP_927208.1| hypothetical protein glr4262 [Gloeobacter violaceus PCC 7421]
gi|35214836|dbj|BAC92203.1| glr4262 [Gloeobacter violaceus PCC 7421]
Length = 220
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++K+LE+EP N AL + +++ + +A+ V+RL D +P +L A Y++ G
Sbjct: 62 YQKILEREPNNPNALSNLASLYLQQFQFDKAIPLVERLADAQPENPNVRLQLAQLYQVTG 121
Query: 196 KLSTAKRLFKDIL 208
K A + + +L
Sbjct: 122 KADKAGQTYDKVL 134
>gi|418529121|ref|ZP_13095061.1| hypothetical protein CTATCC11996_05513 [Comamonas testosteroni ATCC
11996]
gi|371453547|gb|EHN66559.1| hypothetical protein CTATCC11996_05513 [Comamonas testosteroni ATCC
11996]
Length = 595
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 161 GRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHD 220
G NKEA +L+ P++VE AL E G S +RL +DI+K +P A +
Sbjct: 426 GLNKEAYALQAQLLSQAPDDVELAYDTALLAERAGNFSEMERLLRDIIKRKPDFKHAYNA 485
Query: 221 LG 222
LG
Sbjct: 486 LG 487
>gi|380011006|ref|XP_003689605.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Apis florea]
Length = 794
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
PG + + + E DA K + + + P N E + + + ++AL +
Sbjct: 575 PGVL---QKIGEMYDATGDKQQAYQFYSDSYRFFPANFEVIDWLGSYFVSMQIAEKALVY 631
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
K+ +++ P+E W+LL A C +G+ A ++DI + P L+R DLG
Sbjct: 632 FKKAVELAPDEPRWRLLVAACLRRIGQFHKAVLEYQDIHNKFPENIECLKFLVRLCSDLG 691
>gi|397691233|ref|YP_006528487.1| tetratricopeptide TPR_2 [Melioribacter roseus P3M]
gi|395812725|gb|AFN75474.1| tetratricopeptide TPR_2 [Melioribacter roseus P3M]
Length = 1052
Score = 40.0 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
EA+K Q M GR EA++ + + I + P E L+ LCYE M + A +
Sbjct: 26 EAVKRQAQNLMNEGRYAEAVDQLNKYISLNPQLAEGYHLRGLCYEQMTQFQYAVLDLRRA 85
Query: 208 LKERPLLLRALHDLGRYVS 226
L+ P L DL R +S
Sbjct: 86 LRLDPANLVISKDLNRVIS 104
>gi|418576807|ref|ZP_13140939.1| hypothetical protein SSME_19950 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379324472|gb|EHY91618.1| hypothetical protein SSME_19950 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 478
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 129 KSEVEEMFEKLLEKEPRNVE------ALKVVMQGNMRRGRNKEALEFV-KRLIDIEPNEV 181
K E+EEMFE + P +E A++++ Q +GR EA F+ + DI+ + V
Sbjct: 118 KEELEEMFE-VSYHTPEKIETESKLFAIQLIFQYLFSQGRLPEARNFILNQSTDIQEHRV 176
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
LL A+CY + + TAK +F+ +L E + AL
Sbjct: 177 VRNLL-AMCYLYLNEYETAKEMFERLLSEDNTDVHAL 212
>gi|289192263|ref|YP_003458204.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938713|gb|ADC69468.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 310
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 127 MGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
+GK E E FEK+++K +++ AL V+Q + GR EA E++++ + + PN +
Sbjct: 190 LGKFREALECFEKIIQKNEKDIRALLYVIQILIFLGRITEAKEYIEKALKLNPNSSLLYV 249
Query: 186 LQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227
+ +GK A F +L+ P + A H G+ V++
Sbjct: 250 YYGIVLNKLGKYKKALEWFDKVLEISPTNVYAWH--GKAVAL 289
>gi|157879372|pdb|1NA3|A Chain A, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
gi|157879373|pdb|1NA3|B Chain B, Design Of Stable Alpha-Helical Arrays From An Idealized
Tpr Motif
Length = 91
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
E E ++K LE +P N EA + ++G EA+E+ ++ ++++PN E
Sbjct: 26 DEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAE 78
>gi|337286267|ref|YP_004625740.1| hypothetical protein Thein_0899 [Thermodesulfatator indicus DSM
15286]
gi|335359095|gb|AEH44776.1| Tetratricopeptide TPR_1 repeat-containing protein
[Thermodesulfatator indicus DSM 15286]
Length = 561
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E EKLLEK+P N EAL ++ + + + ++A++ ++RL P L A Y
Sbjct: 124 ETLEKLLEKDPNNAEALSILTSIYLEQNKLEKAIKVLERLAKKNPENPVIYLELARVYRK 183
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYV 225
G A++ + LK P L+ L + G ++
Sbjct: 184 KGDFDQARKYYSKALKLEPDNLKILLEYGDFL 215
>gi|255585831|ref|XP_002533593.1| smad nuclear interacting protein, putative [Ricinus communis]
gi|223526522|gb|EEF28784.1| smad nuclear interacting protein, putative [Ricinus communis]
Length = 886
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 161 GRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
G ++EAL+ + RL++ +P EWK MG+ A+ +F++IL+ + L + AL
Sbjct: 796 GEDEEALKKLSRLVEAQPLVTEWKFSMVRLLNEMGRTQVARSMFEEILQMKALFVNAL 853
>gi|452749162|ref|ZP_21948932.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri NF13]
gi|452006988|gb|EMD99250.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri NF13]
Length = 733
Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
G+FGS LRP LP + A+ LK A+ + ++MF PR V+ LK+ G
Sbjct: 237 GAFGSGLRPQYQLPLAVMAALKLKA---AVRVELTRQQMFT--FGYRPRTVQQLKLAADG 291
Query: 157 NMR-RGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
R + A+ R D +EVEW + C
Sbjct: 292 EGRLQAIEHRAIGQTSRFEDFTEHEVEWSGMLYAC 326
>gi|357438957|ref|XP_003589755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478803|gb|AES60006.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 891
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 130 SEVEEMFEKLLEKEP-RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWK-LLQ 187
+ +EE E+L + P RNV + ++ G R GR +EAL+ R+ E N V W ++
Sbjct: 122 NRIEEA-ERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRM--PERNVVSWNTVMT 178
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLL 214
AL + G++ A+RLF + ++ER ++
Sbjct: 179 ALAH--CGRIDDAERLFNE-MRERDVV 202
>gi|328779761|ref|XP_394520.3| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Apis mellifera]
Length = 797
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
PG + + + E DA K + + + P N E + + + ++AL +
Sbjct: 575 PGVL---QKIGEMYDAAGDKQQAYQFYSDSYRFFPANFEVIDWLGSYFVSMQIAEKALVY 631
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
K+ +++ P+E W+LL A C +G+ A ++DI + P L+R DLG
Sbjct: 632 FKKAVELAPDEPRWRLLVAACLRRIGQFHKAVLEYQDIHNKFPENIECLKFLVRLCSDLG 691
>gi|149048929|gb|EDM01383.1| rCG29705 [Rattus norvegicus]
Length = 519
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S EE + + L+ R E L + GR+KEALE
Sbjct: 284 PSHHVAVVNLGRLHRSLGENSMAEEWYRRALQV-ARTAEVLSPLGALYYNTGRHKEALEV 342
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ + ++P++ + +L A +MG+ A+++ I+ E P L
Sbjct: 343 YREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLEC 390
>gi|325179518|emb|CCA13915.1| Intraflagellar Transport Protein 88 putative [Albugo laibachii
Nc14]
Length = 853
Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
++A++F +R I+P+EV+W+L+ C+ MG A L++ I ++ P L L L
Sbjct: 673 EKAIQFFERASQIQPSEVKWRLMVTSCFRRMGAYQRAIVLYEQIHQDFPENLECLRYL 730
>gi|56420359|ref|YP_147677.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426]
gi|47076784|dbj|BAD18326.1| hypothetical protein [Geobacillus kaustophilus]
gi|56380201|dbj|BAD76109.1| hypothetical protein GK1824 [Geobacillus kaustophilus HTA426]
Length = 1358
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 162 RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ +EA +++RL+ +P++VE ++LQA+ + G+ A+R + I+ E PL AL L
Sbjct: 1215 KRQEAKRWLERLVADDPDDVELRVLQAVVWLQEGQHEKAERQLEAIVAEEPLAREALMLL 1274
Query: 222 G 222
G
Sbjct: 1275 G 1275
>gi|71656043|ref|XP_816574.1| intraflagellar transport protein IFT88 [Trypanosoma cruzi strain CL
Brener]
gi|70881713|gb|EAN94723.1| intraflagellar transport protein IFT88, putative [Trypanosoma
cruzi]
Length = 173
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 166 ALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
A++F +R I+P EV+W+L+ A C+ G AKRL++ + ++ P + L
Sbjct: 21 AIQFFERASQIQPLEVKWQLMVASCHRRRGDYIQAKRLYEAVYRKYPENMECL 73
>gi|428216783|ref|YP_007101248.1| sulfotransferase [Pseudanabaena sp. PCC 7367]
gi|427988565|gb|AFY68820.1| sulfotransferase [Pseudanabaena sp. PCC 7367]
Length = 830
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Query: 116 SENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID 175
SE L + DA+ K +E PRN EA + ++G A+++ K+ +
Sbjct: 291 SEILDRQTDAI-------AHLRKAIELSPRNAEAYSYLATAIGKQGDVGTAMQYAKQALQ 343
Query: 176 IEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227
+ PN E ++A Y M +L A K L RP AL+ G M
Sbjct: 344 LNPNLAEAHQIEAEAYGAMRELDKALESCKRALALRPNFAEALNTCGNIYMM 395
>gi|421615893|ref|ZP_16056912.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri KOS6]
gi|409782075|gb|EKN61642.1| aldehyde oxidase and xanthine dehydrogenase family protein
[Pseudomonas stutzeri KOS6]
Length = 733
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
G+FGS LRP LP + A+ LK + + ++MF PR ++ LK+ G
Sbjct: 237 GAFGSGLRPQYQLPLAVMAALKLKASVRVELTR---QQMFT--FGYRPRTIQQLKLAADG 291
Query: 157 NMR-RGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
R + +A+ R D +EVEW + C
Sbjct: 292 EGRLQAIEHKAIGQTSRFEDFTEHEVEWSGMLYAC 326
>gi|444912555|ref|ZP_21232716.1| hypothetical protein D187_04652 [Cystobacter fuscus DSM 2262]
gi|444716773|gb|ELW57614.1| hypothetical protein D187_04652 [Cystobacter fuscus DSM 2262]
Length = 588
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 106 SVALPGKM----RASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG 161
+ ALPG++ R L E+ DA+ E M ++ LE++P ++EAL + + N + G
Sbjct: 148 AAALPGEVSGYRRLGMALAERGDAV----RAERMLKRALERDPGDLEALITLARLNEKAG 203
Query: 162 RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
R A E++ R ++ +P+ A E G+L A RL + + R R L D
Sbjct: 204 RLAAAEEYLARALERDPD-------NAAMLEGAGRL--ALRLGSSV-RARAYFDRLLADA 253
Query: 222 GRYVSMTLQIQSLF 235
G +T+Q+ LF
Sbjct: 254 GD-PELTVQVALLF 266
>gi|375008894|ref|YP_004982527.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359287743|gb|AEV19427.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 1386
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 162 RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ +EA +++RL+ +P++VE ++LQA+ + G+ A+R + I+ E PL AL L
Sbjct: 1215 KRQEAKRWLERLVADDPDDVELRVLQAVVWLQEGQHEKAERQLEAIVAEEPLAREALMLL 1274
Query: 222 G 222
G
Sbjct: 1275 G 1275
>gi|196232458|ref|ZP_03131311.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
gi|196223530|gb|EDY18047.1| TPR repeat-containing protein [Chthoniobacter flavus Ellin428]
Length = 747
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE--VEWKLLQ 187
+E E + ++LE +P +++AL ++ M+ GR + A+ + R+ + PN V L +
Sbjct: 21 AEAEACYREILEAQPDHLDALHLLGVAAMQTGRAELAVNLLNRVAALVPNHPAVHSNLGE 80
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
A Y +GK A F+ L+ +P + A ++LG
Sbjct: 81 A--YRGLGKFEEAVASFRRALQLKPDDVLAQYNLG 113
>gi|398805152|ref|ZP_10564133.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
gi|398092314|gb|EJL82729.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
Length = 759
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 48/103 (46%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E+ + + ++LE P N + L + + GR K++ +R + +P++
Sbjct: 147 ELADTYRRMLETNPHNADWLNNLGAVQRKLGRFKDSAASFRRAVAADPDDALAHNNLGAT 206
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233
+G+L+ A ++ LK RP + A H+LG ++ Q S
Sbjct: 207 LRTLGQLTEAVDCYRQALKIRPNFIEAHHNLGNLLAELGQADS 249
>gi|326434846|gb|EGD80416.1| hypothetical protein PTSG_11061 [Salpingoeca sp. ATCC 50818]
Length = 850
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGK----LSTAKR---LFKDILKERPLLLR 216
++A++F +R ++I+P EV+W+L+ A C+ G L T KR LF + ++ L+R
Sbjct: 645 QKAIQFFQRAVEIQPGEVKWRLMIASCHRKTGNYQRALETYKRIHTLFPENIECLKFLIR 704
Query: 217 ALHDLG 222
D+G
Sbjct: 705 LCTDMG 710
>gi|372270579|ref|ZP_09506627.1| hypothetical protein MstaS_05859 [Marinobacterium stanieri S30]
Length = 531
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EVEWKLLQALCYELMGKLS 198
LE+EP + L + + GRN+EAL F++R D P+ EV L+Q L +G+
Sbjct: 444 LEQEPSDPAILDSMGWVLHKLGRNREALNFLQRAFDTYPDPEVRSHLVQVLW--ALGEQE 501
Query: 199 TAKRLFKDILKERP 212
TA+++ ++ L++ P
Sbjct: 502 TARKMLQEGLEQTP 515
>gi|410622900|ref|ZP_11333721.1| thioredoxin domain-containing protein [Glaciecola pallidula DSM
14239 = ACAM 615]
gi|410157575|dbj|GAC29095.1| thioredoxin domain-containing protein [Glaciecola pallidula DSM
14239 = ACAM 615]
Length = 286
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSE---VEEMFEKLLEKEPRNV--EALK 151
G FG P+V L ++ + L D G E + EM +K L KE + A++
Sbjct: 75 GQFGVKGLPTVIL---VKDGQPL----DGFAGPQEEKQIREMLDKHLPKEEDGLLQSAME 127
Query: 152 VVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
+V+QGN +A F K+ +++ + +L+ A CY +G++ AK+L +
Sbjct: 128 LVLQGNYH-----DAFSFAKQALELSSERADIRLMMADCYVEVGQVELAKKLVDQV 178
>gi|158522428|ref|YP_001530298.1| hypothetical protein Dole_2417 [Desulfococcus oleovorans Hxd3]
gi|158511254|gb|ABW68221.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 762
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 126 LMGKSEVE-EMFEKLLEKEPRNVEALKVVMQGNMRR--GRNKEALEFVKRLIDIEPNEVE 182
+ G SE + F+K + +P ++EA G + R GR KEA++F +R ++I P +
Sbjct: 439 IAGNSEAALQAFQKAIALDPNHMEAHN--NSGFILRELGRPKEAIKFFRRALEINPAYAD 496
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
L + + ++ A+ F+ L+ PL +A ++LG
Sbjct: 497 AHYNLGLAFFDLKDMAQARTAFEQTLRVNPLYSKAHNNLG 536
>gi|16331053|ref|NP_441781.1| hypothetical protein slr1644 [Synechocystis sp. PCC 6803]
gi|383322795|ref|YP_005383648.1| hypothetical protein SYNGTI_1886 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325964|ref|YP_005386817.1| hypothetical protein SYNPCCP_1885 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491848|ref|YP_005409524.1| hypothetical protein SYNPCCN_1885 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384437116|ref|YP_005651840.1| hypothetical protein SYNGTS_1887 [Synechocystis sp. PCC 6803]
gi|451815210|ref|YP_007451662.1| hypothetical protein MYO_119040 [Synechocystis sp. PCC 6803]
gi|1653548|dbj|BAA18461.1| slr1644 [Synechocystis sp. PCC 6803]
gi|339274148|dbj|BAK50635.1| hypothetical protein SYNGTS_1887 [Synechocystis sp. PCC 6803]
gi|359272114|dbj|BAL29633.1| hypothetical protein SYNGTI_1886 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359275284|dbj|BAL32802.1| hypothetical protein SYNPCCN_1885 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278454|dbj|BAL35971.1| hypothetical protein SYNPCCP_1885 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407961580|dbj|BAM54820.1| hypothetical protein BEST7613_5889 [Bacillus subtilis BEST7613]
gi|451781179|gb|AGF52148.1| hypothetical protein MYO_119040 [Synechocystis sp. PCC 6803]
Length = 290
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP NV AL+ +++ +++ A+ ++RL I ++V++++L A +
Sbjct: 59 YQLVLEREPDNVNALQGLLEIRLQQKNLAAAIAPLERLGQIRTDQVQYRILLAQLKTQLE 118
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL-GRY 224
+ A +++++IL + P ++AL L G Y
Sbjct: 119 DNAGAAKVYREILTQSPHNIQALKGLSGLY 148
>gi|269119983|ref|YP_003308160.1| hypothetical protein Sterm_1364 [Sebaldella termitidis ATCC 33386]
gi|268613861|gb|ACZ08229.1| Tetratricopeptide TPR_2 repeat protein [Sebaldella termitidis ATCC
33386]
Length = 264
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKE-ALEFVKRLIDIEPNEVEWKLLQAL 189
E E+ K +E +PRN AL M + RR N + A+E+ K+ I + PN +
Sbjct: 54 EYEKTLNKAIEADPRNYFALD-DMGVHYRRSNNPDKAIEYYKKSIAVNPNNPFPYFNAGV 112
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGR-YVSMTLQIQSL 234
Y A+R++K ++ P + LG+ Y++M ++L
Sbjct: 113 AYMYKKDFVNAERIYKQLITAIPDYPEGYYGLGQVYLNMENYAKAL 158
>gi|15126637|gb|AAH12250.1| Intraflagellar transport 88 homolog (Chlamydomonas) [Mus musculus]
Length = 824
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 56/115 (48%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P +A L E D+ KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 VPTDSQALSKLGELYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
+ +R I+P +V+W+L+ A C+ G A +K+I ++ P + L L R
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVR 696
>gi|118357165|ref|XP_001011832.1| DNA polymerase family B containing protein [Tetrahymena thermophila]
gi|89293599|gb|EAR91587.1| DNA polymerase family B containing protein [Tetrahymena thermophila
SB210]
Length = 2315
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E F+K L+ P +++ LK + +EA++ ++ + I+P + E A
Sbjct: 1911 EANECFQKALDINPNSLQVLKRAALFYYSNNQFQEAIQNYEKALSIDPQDYEIFGCLAQV 1970
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
Y +G + A ++ + +K+ P + +DLG Y S
Sbjct: 1971 YHQIGNIQKAIKILEKAIKQNPRNHQFHYDLGNYSS 2006
>gi|406927035|gb|EKD63129.1| hypothetical protein ACD_51C00334G0010 [uncultured bacterium]
Length = 449
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+K LEK P N+ A+ + Q M EA + V +++ E NE+ K Q + Y G
Sbjct: 89 FQKALEKSPNNISAVTGIAQAYMHLNNFTEARQTVDSVVNPESNEL--KYYQGMLYFYDG 146
Query: 196 KLSTAKRLFKDILK 209
+ ++ F+ I+
Sbjct: 147 EYDRSEEYFQSIVD 160
>gi|23013697|ref|ZP_00053564.1| COG3914: Predicted O-linked N-acetylglucosamine transferase,
SPINDLY family [Magnetospirillum magnetotacticum MS-1]
Length = 659
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 119 LKEKRDALMGKSEVEE---MFEKLLEKEPRNVEALK------VVMQGNMRRGRNKEALEF 169
L ++ +AL + VEE +++ L+ + P++ EA K V+ QG GR EAL+
Sbjct: 8 LLQRAEALHNQGRVEEADRLYQDLITQAPQSPEAAKALTNRGVIAQGG---GRTDEALDL 64
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
R + + P E + + +G+ + A+ F K P LL A +LG
Sbjct: 65 HGRALALVPGLAEGWCNRGDLFSDLGRWNEAQADFARAAKLSPQLLPAWFNLG 117
>gi|195998235|ref|XP_002108986.1| hypothetical protein TRIADDRAFT_18483 [Trichoplax adhaerens]
gi|190589762|gb|EDV29784.1| hypothetical protein TRIADDRAFT_18483 [Trichoplax adhaerens]
Length = 474
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLL--QALCY 191
EMF+K P+N++ LK V + R+K A+E V I + V+W++L Q +CY
Sbjct: 67 EMFQKASILNPKNIDNLKQVARSLFLLARHKAAIE-VYNEISRQQTSVDWEVLHNQGICY 125
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232
+ + + AK K + + +H LGR ++ +Q
Sbjct: 126 LYLKEFTKAKEYLKAAIDNNRHEISYIH-LGRVFALEGNLQ 165
>gi|344345323|ref|ZP_08776177.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
gi|343803152|gb|EGV21064.1| Tetratricopeptide TPR_2 repeat-containing protein [Marichromatium
purpuratum 984]
Length = 544
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 47/103 (45%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E + E L EPR+ E L + +R GR ++AL + +R +++ P+ E L
Sbjct: 109 AEALTVLEGALALEPRDPEILNAIATALLRLGRGEDALGYYRRTLEVAPDHAEAHYNLGL 168
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232
G+L A + + P L +A ++ G + ++Q
Sbjct: 169 ALHEFGRLDEALKCYVRANAIDPELPQACNNAGNVCNQLGRLQ 211
>gi|282849558|ref|ZP_06258942.1| tetratricopeptide repeat protein [Veillonella parvula ATCC 17745]
gi|282580495|gb|EFB85894.1| tetratricopeptide repeat protein [Veillonella parvula ATCC 17745]
Length = 215
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
++ N EA V G + L K+ D++PN V A+ Y+L G+L+
Sbjct: 82 IKNNANNAEAYSVRGFATALNGDAAKGLTDTKKAYDLDPNNVANYYNMAMVYKLQGQLND 141
Query: 200 AKRLFKDILKERP 212
+K+ F+ +L++ P
Sbjct: 142 SKQWFEKVLEKDP 154
>gi|198420281|ref|XP_002129495.1| PREDICTED: similar to intraflagellar transport 88 homolog
(Chlamydomonas) isoform 2 [Ciona intestinalis]
Length = 821
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%)
Query: 163 NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+++A+++ +R I+PNEV+W+L+ A CY G A +K I + P + L L
Sbjct: 648 SEKAIKYFERAAVIQPNEVKWQLMVASCYRRSGNYQGAFEKYKQIHGKFPDNIECLKYLN 707
Query: 223 RYVS 226
R S
Sbjct: 708 RLCS 711
>gi|417000328|ref|ZP_11940544.1| tetratricopeptide repeat protein [Veillonella parvula
ACS-068-V-Sch12]
gi|333976030|gb|EGL76902.1| tetratricopeptide repeat protein [Veillonella parvula
ACS-068-V-Sch12]
Length = 213
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
++++ N EA V G + L K+ D++PN V A+ Y+L G+L
Sbjct: 80 IKQDANNGEAYSVRGFATALNGDAAKGLTDTKKAYDLDPNNVANYYNMAMVYKLQGQLDD 139
Query: 200 AKRLFKDILKERP 212
+K+ F+ +L++ P
Sbjct: 140 SKQWFEKVLEKDP 152
>gi|282164146|ref|YP_003356531.1| hypothetical protein MCP_1476 [Methanocella paludicola SANAE]
gi|282156460|dbj|BAI61548.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 348
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 129 KSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
+S VEE +K++E +P N EA ++ RG+ +EA++ ++ + ++P E
Sbjct: 4 ESNVEESIGKLQKMVEADPNNQEARMMLGLAYGTRGQYQEAIKELEAAVKMKPENPEAHF 63
Query: 186 LQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR-YVSM 227
L Y +M L A + + + L+ +P L A+ +L Y++M
Sbjct: 64 DLGLAYNMMDDLDNAVKEYNETLRLKPDHLDAMLNLANAYLAM 106
>gi|297530018|ref|YP_003671293.1| hypothetical protein GC56T3_1717 [Geobacillus sp. C56-T3]
gi|297253270|gb|ADI26716.1| TPR repeat-containing protein [Geobacillus sp. C56-T3]
Length = 1385
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
E ++ ++ + R R +EA +++RL+ P++VE ++LQA+ + G+ A+R ++I
Sbjct: 1201 EFVEYLLAADEERKR-EEAKRWLERLLAERPDDVELRVLQAVVWLQEGQHEKAERQLEEI 1259
Query: 208 LKERPLLLRALHDLG 222
+ E PL AL LG
Sbjct: 1260 VAEDPLAREALMLLG 1274
>gi|15606205|ref|NP_213582.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
gi|2983399|gb|AAC06984.1| hypothetical protein aq_854 [Aquifex aeolicus VF5]
Length = 545
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 47/82 (57%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E EE+++ +LEK P + + L+ + + GR +EA++ ++LI+++P V +K AL
Sbjct: 203 EAEELYKSVLEKYPNSPKILEKLAKLYTASGRIEEAIKIYEKLINLKPRNVNYKTEYALL 262
Query: 191 YELMGKLSTAKRLFKDILKERP 212
G+ AK++ +++ P
Sbjct: 263 LLSTGEFDKAKKILEELYYVNP 284
>gi|383865857|ref|XP_003708389.1| PREDICTED: intraflagellar transport protein 88 homolog [Megachile
rotundata]
Length = 797
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
PG + + + E D++ K + + + P N E + + + ++AL +
Sbjct: 574 PGVL---QKMGEMYDSIGDKQQAYQFYSDSYRFFPANFEVIDWLGSYFVTMQVAEKALIY 630
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
K+ +++ P+E W+LL A C G+ A ++DI + P L+R DLG
Sbjct: 631 FKKAVELAPDEPRWRLLVAACLRRTGQFHKALTEYQDIHNKFPENIECLKFLVRLCSDLG 690
>gi|330815873|ref|YP_004359578.1| hypothetical protein bgla_1g09390 [Burkholderia gladioli BSR3]
gi|327368266|gb|AEA59622.1| TPR domain protein [Burkholderia gladioli BSR3]
Length = 612
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E E + L P + +AL + ++G+N+EA + V R +++ PN+ L
Sbjct: 18 AEAERDYRAALAANPSDADALHLFGVLRHQQGQNQEAADLVGRAVELRPNDAALHLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G++ A F++ L P A ++LG
Sbjct: 78 ALKALGRIDDAIVRFRNALTLAPDFPLAHYNLG 110
>gi|197118808|ref|YP_002139235.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197088168|gb|ACH39439.1| TPR domain protein [Geobacter bemidjiensis Bem]
Length = 190
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 71 LSPENKIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKS 130
+S EN ++ V V L G +IF + NL + A+P + + + +
Sbjct: 1 MSKEN-LLTVAVALIVGMLGGYIIFNVAGNKNLPSNAAVPQGTGSPTDYQRRI------- 52
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
VE EK++ ++P+N++A + + ++A+ ++++++PN V Q +
Sbjct: 53 -VEA--EKIVAQDPKNLQAWSQLGNDYFDTDQPQKAVNAYGKVLELDPNNVNVMTDQGIM 109
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230
Y +G A F+ P L++L++LG M L+
Sbjct: 110 YRKIGWYDKAIANFEKAQAIDPKHLQSLYNLGVVYYMDLK 149
>gi|434387576|ref|YP_007098187.1| hypothetical protein Cha6605_3681 [Chamaesiphon minutus PCC 6605]
gi|428018566|gb|AFY94660.1| hypothetical protein Cha6605_3681 [Chamaesiphon minutus PCC 6605]
Length = 141
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 85 AVIFLAGSVIFL-GSFGSNL-RPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEK 142
+ FL +V+ L G GS+L RP+ ASE + ++A + ++E E+ F +L++
Sbjct: 18 GLAFLCSTVLGLSGMIGSSLDRPA--------ASEKAAQSQNAQL-QAE-EKGFATVLKR 67
Query: 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWK-LLQAL 189
EP N ALK ++ MR+G +++LI ++P ++K LL A+
Sbjct: 68 EPNNQTALKGLVSIRMRQGDAPGTKAALEQLIKLDPTNTQYKELLDAI 115
>gi|78188319|ref|YP_378657.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78170518|gb|ABB27614.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 752
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 48/102 (47%)
Query: 108 ALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEAL 167
ALP + + NL + A + E + KL+ P + E L+ + + R ++ L
Sbjct: 44 ALPLDRQTALNLAQSYLANGSSRQAELILSKLVLLYPDDEEILRETISLYEKSNRAEQTL 103
Query: 168 EFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILK 209
+ L+ + PN++E L A Y G+ + + L++ +LK
Sbjct: 104 PLYQHLLQLRPNDLELTLASARAYSWTGRKAESIALYEKVLK 145
>gi|392374839|ref|YP_003206672.1| hypothetical protein DAMO_1783 [Candidatus Methylomirabilis
oxyfera]
gi|258592532|emb|CBE68841.1| protein of unknown function [Candidatus Methylomirabilis oxyfera]
Length = 2960
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 127 MGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E ++L +++ALK++ + + R EA+E ++ P++VE L
Sbjct: 765 MGRGEEAEASIRRVLAANSADIDALKLLGRLCLDSARYTEAVESYLTVLRHAPHDVETLL 824
Query: 186 LQALCYELMGKLSTAKRLFKDILKERP 212
+ CY +G+ A+ ++ +L P
Sbjct: 825 IVGNCYAEIGRFDQARAFYRKVLSLEP 851
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 127 MGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E ++L +++ALK++ + + R EA+E ++ P++VE L
Sbjct: 1740 MGRGEEAEASIRRVLAANSADIDALKLLGRLCLDSARYTEAVESYLTVLRHAPHDVETLL 1799
Query: 186 LQALCYELMGKLSTAKRLFKDILKERP 212
+ CY +G+ A+ ++ +L P
Sbjct: 1800 IVGNCYAEIGRFDQARAFYRKVLSLEP 1826
>gi|352080191|ref|ZP_08951260.1| sulfotransferase [Rhodanobacter sp. 2APBS1]
gi|351684900|gb|EHA67969.1| sulfotransferase [Rhodanobacter sp. 2APBS1]
Length = 679
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 98 SFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGN 157
++ +++R S + P + A+ L E R EVE + + L++ P +V A+++ +
Sbjct: 133 AYANHVRHSTSDPQLLAAAVALVENR-----IPEVEALLREHLKQAPTDVAAIRMFAEVA 187
Query: 158 MRRGRNKEALEFVKRLIDIEPN 179
R GRN++AL ++R +++ P
Sbjct: 188 ARLGRNEDALHLLERCLELAPG 209
>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
Length = 699
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 25/149 (16%)
Query: 92 SVIFLGSFGSNLRPSVALPGKMRASENLK--EKRDALMGKS------------EVEEMFE 137
SV F+ + P+ G +RA E K E DAL+G + EV+ +F+
Sbjct: 317 SVTFVTFLSTCSTPAAFEDGLIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQRVFQ 376
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWK-LLQALCYELMGK 196
++ EK+ +V V++G++R G + ALE + + N W LL A Y +G+
Sbjct: 377 RM-EKQRDDVVTWNAVIEGSVRNGEFRNALELMP-----QKNLGSWNGLLGA--YIHVGR 428
Query: 197 LSTAKRLFKDILKERPLLLRALHDLGRYV 225
L+ ++LF++ ++ER ++ + LG YV
Sbjct: 429 LADTRKLFEE-MEERDVITWNMI-LGAYV 455
>gi|386002707|ref|YP_005921006.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
gi|357210763|gb|AET65383.1| Tetratricopeptide TPR_2 [Methanosaeta harundinacea 6Ac]
Length = 949
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 131 EVEEMFEKLLEKEPRNVEA---LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187
E +E + + +E +P L VV+Q R GR +EALE RLI+I+PN E +
Sbjct: 315 EAQECYRRAVEIDPEYSNPWYNLGVVLQ---RLGRGEEALEAYDRLIEIDPNLSEAWYNR 371
Query: 188 ALCYELMGKLSTAKRLFKDILKERPL-------LLRALHDLGRY 224
L +G+ A + +L+ P AL LGRY
Sbjct: 372 GLALYSLGRYDEAAGCYDRVLEIDPENGDVWYDKALALGSLGRY 415
>gi|55725300|emb|CAH89515.1| hypothetical protein [Pongo abelii]
Length = 475
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 337 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 396
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 397 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTRRKFPENVECLRFLVRLCTDL 456
Query: 222 G 222
G
Sbjct: 457 G 457
>gi|307150632|ref|YP_003886016.1| hypothetical protein Cyan7822_0709 [Cyanothece sp. PCC 7822]
gi|306980860|gb|ADN12741.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
Length = 441
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
K+ A SE+++ + L K P + +AL + ++ G ++A+ +++++D +P ++
Sbjct: 302 KQQAQSSDSEIQQYLQTL-NKNPDDFDALVALANRYLQLGELEQAIIILEKIVDKKPQDL 360
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+W+ A YEL A+ ++ IL + +AL G
Sbjct: 361 QWQFNLAQLYELTQAKPKAEAIYDRILAQDQNNFKALMGKG 401
>gi|19115534|ref|NP_594622.1| cargo-transport protein Ypp1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74676197|sp|O94441.1|YPP1_SCHPO RecName: Full=Putative cargo-transport protein ypp1
gi|4056548|emb|CAA22583.1| cargo-transport protein Ypp1 (predicted) [Schizosaccharomyces
pombe]
Length = 862
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 136 FEKLLEKEPRNVEAL-KVVMQGNMRRGRNKEALEFVKRLIDIEPNE--VEWKLLQALCYE 192
++K LEK+P N AL + MQ + RR +A++ V+RL+++ P V W LL LC
Sbjct: 483 YQKCLEKQPTNTNALFHLAMQYSERRAIT-DAMQIVRRLLEVNPKYSIVSWHLL-VLCVS 540
Query: 193 LMGKLSTAKRLFKDILK 209
+ + +L + +
Sbjct: 541 CSEQYAAGIKLIDSVFE 557
>gi|356556372|ref|XP_003546500.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
max]
Length = 1088
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 126 LMGKSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EV 181
L+ K EVE+ F+ +L+ + NV AL RGR ++LE KR++ + PN
Sbjct: 138 LLAKGEVEQASAAFKIVLDGDHDNVPALLGQACVEFNRGRFSDSLELYKRVLQVYPNCPA 197
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+L LC +G+ A++ F+ +L+ P
Sbjct: 198 AVRLGIGLCRYKLGQFEKAQQAFERVLQLDP 228
>gi|355570828|ref|ZP_09042098.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
gi|354826110|gb|EHF10326.1| Tetratricopeptide TPR_1 repeat-containing protein [Methanolinea
tarda NOBI-1]
Length = 255
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 97 GSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG 156
G +GS+ P + L +RA E L + D M +E E L +P NV+AL +++G
Sbjct: 45 GGYGSSEDPMIHL---VRAREFLS-RGDLPMAMAECRES----LTLDPHNVQAL--LLEG 94
Query: 157 NM--RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ R GR EA E +++ + P+E E Y L+G +A++ + L RP
Sbjct: 95 EILFRMGRYGEAAEAFRKVTGMYPSEEEAYTRLGNTYLLLGDYRSAEKAYTRSLAIRP 152
>gi|313894392|ref|ZP_07827957.1| tetratricopeptide repeat protein [Veillonella sp. oral taxon 158
str. F0412]
gi|313441216|gb|EFR59643.1| tetratricopeptide repeat protein [Veillonella sp. oral taxon 158
str. F0412]
Length = 164
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202
E +V + + G+ +G L K+ D++PN V A+ Y+L G+L+ +K+
Sbjct: 39 EAYSVRGFAMALHGDTAKG-----LADTKKAYDLDPNNVANYYNMAMVYKLQGQLNDSKQ 93
Query: 203 LFKDILKERP 212
F+ +L++ P
Sbjct: 94 WFEKVLEKDP 103
>gi|196232461|ref|ZP_03131314.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
gi|196223533|gb|EDY18050.1| Tetratricopeptide TPR_2 repeat protein [Chthoniobacter flavus
Ellin428]
Length = 760
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
++ ++L +P VEA ++ + GR+ ALE++ R + IEP L Y +
Sbjct: 28 LYRQILAVQPMWVEAWHMLGLLAHQTGRSDLALEYIGRALAIEPRNGAAYSNLGLVYRSL 87
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLGRYVSMT 228
G++ A ++ L+ +P L H+L + T
Sbjct: 88 GRVDEAMEAYRRALQLQPALPEPYHNLANLLRQT 121
>gi|88602758|ref|YP_502936.1| hypothetical protein Mhun_1483 [Methanospirillum hungatei JF-1]
gi|88188220|gb|ABD41217.1| TPR repeat [Methanospirillum hungatei JF-1]
Length = 221
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 72 SPENKIMKVLKEKAVIFLAGSVIFLGSF----GSNLRPSVALPGKMRASENLKEKRDALM 127
+P+N + LK A+ + L + ++ P+V K A +NL
Sbjct: 35 APDNPALWNLKGVALGMIGDHEGSLACYEKVLTTDPGPAVYWNNKGLALQNLGRY----- 89
Query: 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187
+E EEM++K LE++P ++EA + GR +EAL++ ++++ P+ + L
Sbjct: 90 --AEAEEMYKKALERDPESLEARYNLANTLQSLGRFEEALDYYEKVLYDRPDHILTMLNM 147
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ + A ++++IL+ P A +++G
Sbjct: 148 GNALAALHRFEEAIAMYQEILEINPEYSDAAYNIG 182
>gi|17532855|ref|NP_495712.1| Protein EMB-27 [Caenorhabditis elegans]
gi|3875714|emb|CAA88313.1| Protein EMB-27 [Caenorhabditis elegans]
gi|11935120|gb|AAG41979.1| APC6 [Caenorhabditis elegans]
Length = 655
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL 213
R+GR EA+ F ++ I +EP V+ ALCY ++G + A F L P
Sbjct: 507 RQGRLNEAIMFYQKAIRMEPKFVDAIASTALCYAVLGNIDKATEFFNKALAIDPF 561
>gi|428210639|ref|YP_007083783.1| Peptidase family M48 [Oscillatoria acuminata PCC 6304]
gi|427999020|gb|AFY79863.1| Peptidase family M48 [Oscillatoria acuminata PCC 6304]
Length = 519
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++L+EK+P + +++Q + GR +EAL ++R + PNE E L++A L G
Sbjct: 143 LQQLVEKQPEFIPGHVLLVQALQQYGRGEEALAVLERATTLYPNEPE--LIKAEISALQG 200
Query: 196 -----KLSTAKRLFKDILKERP----LLLRALHDLGRYVS 226
+ S A R F + E P A +DLGRY S
Sbjct: 201 EEKWLESSIAARQFAVLYPEHPQSSEFEAIADNDLGRYRS 240
>gi|118359319|ref|XP_001012899.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89294666|gb|EAR92654.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1122
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI-EPNEVEWKLLQAL 189
E + +++ ++ +P ++ K ++ ++ GR +EA+EF+ + I + E NEV++ L +
Sbjct: 683 EALDWYKRAIKLDPLYMDPFKRLIDIYVKEGRQEEAIEFLTKGIGLAEKNEVQYFYLGVI 742
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ + KL A + FK +++ P L A +LG
Sbjct: 743 KFKEL-KLDEAMQFFKQAIEKNPSLEDAHFNLG 774
>gi|86605655|ref|YP_474418.1| hypothetical protein CYA_0953 [Synechococcus sp. JA-3-3Ab]
gi|86554197|gb|ABC99155.1| TPR repeat protein [Synechococcus sp. JA-3-3Ab]
Length = 263
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 84 KAVIFLAGSVIFLG-SFGSNLR---PSVALPGKMRASENLKEKRDALMGKSEVEEMFEKL 139
KA++ + G+ +FL SFG L+ PS + +E L+ + D + +
Sbjct: 16 KALVLVVGAAMFLSFSFGPILQALGPSDSQDTANLVTEQLRAQADG----------YRAV 65
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
LE+EP N AL+ ++ ++ + A+E +K+L+++EP + + A + G L
Sbjct: 66 LEREPDNPIALRGLIDTQLQLNEPQGAIEPLKKLVELEPENRQLRAFLAQIQQDTGDLEG 125
Query: 200 A 200
A
Sbjct: 126 A 126
>gi|404496889|ref|YP_006720995.1| lipoprotein [Geobacter metallireducens GS-15]
gi|418066276|ref|ZP_12703641.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter metallireducens
RCH3]
gi|78194494|gb|ABB32261.1| TPR domain lipoprotein [Geobacter metallireducens GS-15]
gi|373560717|gb|EHP86971.1| PEP-CTERM system TPR-repeat lipoprotein [Geobacter metallireducens
RCH3]
Length = 883
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 114 RASENLKEKRDALMGKSEVEEM--FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVK 171
RAS L+ + L K E E M +++ K+P+N +A + RG +++ALE+ +
Sbjct: 159 RASAMLQLAKVYLATKREQEGMGLLNEIVRKDPKNTKAYYLAAFYEGYRGNSEKALEYYQ 218
Query: 172 RLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKE 210
+++ +P++ + + G++ A+RL D++++
Sbjct: 219 KIMQADPDDANAAFRIGMMHISKGEVDKAERLADDLIRK 257
>gi|352080482|ref|ZP_08951421.1| Aspartyl/Asparaginyl beta-hydroxylase [Rhodanobacter sp. 2APBS1]
gi|351683763|gb|EHA66839.1| Aspartyl/Asparaginyl beta-hydroxylase [Rhodanobacter sp. 2APBS1]
Length = 448
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
E ++ K LE +P N EAL V + RG A E +++ + I+P E ++ +
Sbjct: 35 AEALYRKALETQPDNAEALNFVAMCELGRGEFDSAREHLEKAVHIDPEEANFRKNLGILQ 94
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRA 217
+G A F ++ P L A
Sbjct: 95 LALGHAQDAIDTFDQVIAMDPKELSA 120
>gi|374851919|dbj|BAL54865.1| tetratricopeptide repeat domain protein [uncultured Acidobacteria
bacterium]
Length = 1230
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 125 ALMGKSEVEEMFEKL---LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
AL+ E E + L +E++P EA + + + GR +EA+E ++ + + P+ V
Sbjct: 606 ALLDAGEWEGAIQSLRQAIEQQPEFPEAYDHLGRALLHLGRVEEAIEAYRQALALRPDFV 665
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ L G+L A R + L+ +P L RA HDLG
Sbjct: 666 HAYHGLGVALYLNGELDEAIRALERALELKPDLPRAHHDLG 706
>gi|428312764|ref|YP_007123741.1| O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
gi|428254376|gb|AFZ20335.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Microcoleus sp. PCC 7113]
Length = 789
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN--EVEWKLLQ 187
S E + +++L+++P + EAL ++ + + G+ +EA+ + ++LI + P+ E ++L
Sbjct: 21 SHAEWICQQILQQQPNSTEALDLLGRMAHQVGKLEEAIAYYQKLIALLPDYAEAYYRLGS 80
Query: 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
AL + G+L+ A ++ +K +P A ++LG
Sbjct: 81 AL--QSKGQLAEAIAFYQHAIKLQPDYTEAHYNLG 113
>gi|431921001|gb|ELK18770.1| Intraflagellar transport protein 88 like protein [Pteropus alecto]
Length = 787
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P RA L E D KS+ + + + P N+ ++ + + ++A++
Sbjct: 582 VPTDSRALCKLGELYDGEGDKSQAFQHYYESYRYFPSNIGVIEWLGAYYIDTQFCEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KDI ++ P L+R D+
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENAECLRFLVRLCTDI 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|320109150|ref|YP_004184740.1| hypothetical protein AciPR4_3997 [Terriglobus saanensis SP1PR4]
gi|319927671|gb|ADV84746.1| Tetratricopeptide TPR_1 repeat-containing protein [Terriglobus
saanensis SP1PR4]
Length = 272
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 53/94 (56%), Gaps = 14/94 (14%)
Query: 90 AGSVIFLGS-FGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVE 148
A S ++L + + S + P++ P EN+K + A+ G F+++L ++P+++
Sbjct: 62 ATSKLYLATAYSSQVVPNMETP------ENMKIAQKAIDG-------FQEVLNRDPKDLT 108
Query: 149 ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
ALK + + R+ A ++ +++ID++PN+ E
Sbjct: 109 ALKQIASIYRQTKRSDLAKQYEQKVIDVDPNDAE 142
>gi|87307492|ref|ZP_01089636.1| TPR domain protein [Blastopirellula marina DSM 3645]
gi|87289662|gb|EAQ81552.1| TPR domain protein [Blastopirellula marina DSM 3645]
Length = 1429
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176
AL G E F KLL + P + EAL+ +Q + GR +EA +++L+D+
Sbjct: 908 ALEGAESAEVQFSKLLNENPNSAEALQAAIQFELHVGRREEAQRLLEKLVDL 959
>gi|322785507|gb|EFZ12176.1| hypothetical protein SINV_14518 [Solenopsis invicta]
Length = 771
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
PG + + L E D++ K + + + P N E + + + ++AL +
Sbjct: 567 PGVL---QKLGELYDSIGDKQQAFQFYNDSHRFYPANFEVIDWIGSYFISMQVAEKALAY 623
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
++ +++ P+E W+LL A C G+ A ++DI + P L+R DLG
Sbjct: 624 FQKAVELAPDEPRWRLLVAACLRRTGQFHKALAEYQDIHNKFPENIECLKFLIRLCSDLG 683
>gi|296109580|ref|YP_003616529.1| TPR repeat-containing protein [methanocaldococcus infernus ME]
gi|295434394|gb|ADG13565.1| TPR repeat-containing protein [Methanocaldococcus infernus ME]
Length = 234
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWK 184
A G E +K+L P++ AL + M+ R ++A+E+ K++++I N +E K
Sbjct: 144 ATGGVDEALITIKKILSINPKDTTALFLAGILYMKLKRFEKAIEYFKKVLEINKNHIEAK 203
Query: 185 LLQALCYELMG 195
+ ALCYE +G
Sbjct: 204 IGLALCYEKLG 214
>gi|374999498|ref|YP_004975586.1| hypothetical protein AZOLI_p60001 [Azospirillum lipoferum 4B]
gi|357428469|emb|CBS91426.1| protein of unknown function [Azospirillum lipoferum 4B]
Length = 639
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 6/88 (6%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E ++ ++L +PRN A+ ++ R GR +ALE ++ +DI P +
Sbjct: 21 DEARALYLRILAVDPRNAHAMHLLGLAERRLGRPDKALEMIRSALDILPGMAD------A 74
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRA 217
CY L L+ R+ + + R L+ A
Sbjct: 75 CYNLGSVLAELGRIDEAVAAHRRALVLA 102
>gi|449117458|ref|ZP_21753875.1| hypothetical protein HMPREF9726_01860 [Treponema denticola H-22]
gi|448950659|gb|EMB31480.1| hypothetical protein HMPREF9726_01860 [Treponema denticola H-22]
Length = 992
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|288960303|ref|YP_003450643.1| polypeptide N-acetylglucosaminyltransferase [Azospirillum sp. B510]
gi|288912611|dbj|BAI74099.1| polypeptide N-acetylglucosaminyltransferase [Azospirillum sp. B510]
Length = 1344
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 38/63 (60%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
+++++L+ EPR+ +AL ++ N +R N +AL+ + +++ P ++ Q + + +
Sbjct: 25 LYQRVLQVEPRHADALHLLGVLNHQRNDNLQALDLISMAVELAPEVADYHANQGIVLQRL 84
Query: 195 GKL 197
G+L
Sbjct: 85 GRL 87
>gi|434393110|ref|YP_007128057.1| tetratricopeptide repeat-containing protein [Gloeocapsa sp. PCC
7428]
gi|428264951|gb|AFZ30897.1| tetratricopeptide repeat-containing protein [Gloeocapsa sp. PCC
7428]
Length = 267
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E +E +L++EP N AL+ +++ + K A+ +++L + P E E+ LL A
Sbjct: 54 TEAARGYEVVLQREPENQTALRGLVKARLELLDLKGAVAPLQKLAALNPTEAEYNLLLAD 113
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G ++ IL P L+AL L
Sbjct: 114 IKQRLGDREGETTAYRSILATNPGNLQALEGLA 146
>gi|209886536|ref|YP_002290393.1| hypothetical protein OCAR_7425 [Oligotropha carboxidovorans OM5]
gi|337739942|ref|YP_004631670.1| TPR repeat-containing protein [Oligotropha carboxidovorans OM5]
gi|386028960|ref|YP_005949735.1| TPR repeat protein [Oligotropha carboxidovorans OM4]
gi|209874732|gb|ACI94528.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
gi|336094028|gb|AEI01854.1| TPR repeat protein [Oligotropha carboxidovorans OM4]
gi|336097606|gb|AEI05429.1| TPR repeat protein [Oligotropha carboxidovorans OM5]
Length = 267
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 30/180 (16%)
Query: 71 LSPENKIMKVLKEK-----AVIFLAGSVI----FLGSFGSNLRPSVALPGK--MRASENL 119
+ P +++ ++L A + LAG GS GS + SVA P RA+E
Sbjct: 1 MRPSSRVARLLGSVGFLTVAAVALAGCQTAGRDITGSLGS--KASVAAPANDPQRAAEVY 58
Query: 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLI----- 174
EK A + + + L + +A+ V+ Q N+ N+E L R +
Sbjct: 59 GEKYRANPKDLDSALRYGQALRANGQREQAVAVLEQANLAHPGNREVLGAYGRALAENGN 118
Query: 175 -----DI-----EPNEVEWKLL--QALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
D+ P +W++L Q + MGK A+R + + LK RP L +LG
Sbjct: 119 FKLAFDVLSRAHTPANPDWRILSTQGAVLDQMGKPDEARRYYANALKIRPDEPSVLSNLG 178
>gi|422340514|ref|ZP_16421455.1| TPR domain-containing protein [Treponema denticola F0402]
gi|325475688|gb|EGC78864.1| TPR domain-containing protein [Treponema denticola F0402]
Length = 992
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|449130269|ref|ZP_21766490.1| hypothetical protein HMPREF9724_01155 [Treponema denticola SP37]
gi|448943108|gb|EMB24001.1| hypothetical protein HMPREF9724_01155 [Treponema denticola SP37]
Length = 992
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|449665762|ref|XP_002161009.2| PREDICTED: sperm-associated antigen 1-like [Hydra magnipapillata]
Length = 939
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 43/95 (45%), Gaps = 11/95 (11%)
Query: 135 MFEKLLEKEPRNVEALKVVMQGN---------MRRGRNKEALEFVKRLIDIEPNEVEWKL 185
+F L KE N E L M N ++G+ KEA++F R I I P EV
Sbjct: 699 VFNNQLSKESLNTENLMHTMTFNELKELGNQYFKQGKIKEAIDFYSRCIVINPQEVASYT 758
Query: 186 LQALCYELMG--KLSTAKRLFKDILKERPLLLRAL 218
+ALC+ MG KL A K L P ++AL
Sbjct: 759 NRALCFLKMGDEKLPDAISDCKTALNLEPNNVKAL 793
>gi|42525963|ref|NP_971061.1| TPR [Treponema denticola ATCC 35405]
gi|449112904|ref|ZP_21749450.1| hypothetical protein HMPREF9735_02499 [Treponema denticola ATCC
33521]
gi|449114880|ref|ZP_21751348.1| hypothetical protein HMPREF9721_01866 [Treponema denticola ATCC
35404]
gi|41816013|gb|AAS10942.1| TPR domain protein [Treponema denticola ATCC 35405]
gi|448954323|gb|EMB35105.1| hypothetical protein HMPREF9721_01866 [Treponema denticola ATCC
35404]
gi|448955021|gb|EMB35789.1| hypothetical protein HMPREF9735_02499 [Treponema denticola ATCC
33521]
Length = 992
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|392412323|ref|YP_006448930.1| hypothetical protein Desti_4026 [Desulfomonile tiedjei DSM 6799]
gi|390625459|gb|AFM26666.1| hypothetical protein Desti_4026 [Desulfomonile tiedjei DSM 6799]
Length = 666
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 106 SVALPGKMRASENLKEKRDALMGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK 164
++ LP + AS + K +G+ + E MF ++ P + + +++ +
Sbjct: 470 ALLLPNRREASGSFLGKAYLALGRIDDAERMFRLAIQANPTFPDGYLGMAAITIKKNQLA 529
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
EA F + IDI PN ++ L + GK++ A++ F+ + P A + LG+
Sbjct: 530 EASRFTRSAIDIAPNNYGYQNLMGIVLLKQGKVAEAEKHFRTAIAISPQFPDAYYQLGK 588
>gi|449103568|ref|ZP_21740313.1| hypothetical protein HMPREF9730_01210 [Treponema denticola AL-2]
gi|448964722|gb|EMB45390.1| hypothetical protein HMPREF9730_01210 [Treponema denticola AL-2]
Length = 992
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|449118470|ref|ZP_21754879.1| hypothetical protein HMPREF9725_00344 [Treponema denticola H1-T]
gi|449123612|ref|ZP_21759937.1| hypothetical protein HMPREF9727_02697 [Treponema denticola MYR-T]
gi|448945436|gb|EMB26308.1| hypothetical protein HMPREF9727_02697 [Treponema denticola MYR-T]
gi|448952847|gb|EMB33644.1| hypothetical protein HMPREF9725_00344 [Treponema denticola H1-T]
Length = 992
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|410721444|ref|ZP_11360779.1| tetratricopeptide repeat protein [Methanobacterium sp. Maddingley
MBC34]
gi|410598901|gb|EKQ53464.1| tetratricopeptide repeat protein [Methanobacterium sp. Maddingley
MBC34]
Length = 296
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLL--QA 188
E + F K E +P + AL + + G+ ++ALE+++ + IEP EW +L +
Sbjct: 165 EAIDYFNKAAESDPTSFIALYNIGRAFYEMGKLEDALEYIESALKIEPK--EWDILNYKG 222
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
L MGK A F I++ P+ A ++ G
Sbjct: 223 LILMDMGKNEEAILCFNKIIELHPIYFPAWYNKG 256
>gi|332020497|gb|EGI60912.1| Intraflagellar transport protein 88-like protein [Acromyrmex
echinatior]
Length = 801
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
PG + + L E D++ K + + + P N E + + + ++AL +
Sbjct: 576 PGVL---QKLGELYDSIGDKQQAFQYYNDSHRFYPANFEVIDWIGSYFISMQIAEKALTY 632
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
++ +++ P+E W+LL A C G+ A ++DI + P L+R DLG
Sbjct: 633 FEKAVELAPDEPRWRLLVAACLRRTGQFHKALTEYQDIHNKFPDNIECLKFLIRLCSDLG 692
>gi|13472372|ref|NP_103939.1| hypothetical protein mll2645 [Mesorhizobium loti MAFF303099]
gi|14023118|dbj|BAB49725.1| mll2645 [Mesorhizobium loti MAFF303099]
Length = 592
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 28/175 (16%)
Query: 56 TNLSQSHIAKIPRS-SLSPENK--------IMKVLKE--KAVIFLAGSVIFLGSFGSNLR 104
T S+ + I RS SL P N +M+ L A+ F G+V +LR
Sbjct: 92 TGRSEEGLDLIERSVSLQPTNADFLNNFGTVMRDLGRVAAAIDFFRGAV--------DLR 143
Query: 105 PSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK 164
P ++ A +NL L E E+++ + + P +V A + + GR
Sbjct: 144 PE-----QLAARDNLGSSLKQLGRFEEAEDIYRGTVARNPFHVRARIGLAETLQEAGRLD 198
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELM--GKLSTAKRLFKDILKERPLLLRA 217
EAL + + I P + + LL L +M GKL A LF+ L P + A
Sbjct: 199 EALAVFRESLTIRPKDAD--LLHGLGVGMMEKGKLDEAADLFRQALAVNPGMATA 251
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 48/94 (51%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+ E E ++ ++L ++P++ A + + GR++E L+ ++R + ++P ++
Sbjct: 61 RQEAESIYRQVLARQPKHAAAAHFLGLLLHQTGRSEEGLDLIERSVSLQPTNADFLNNFG 120
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+G+++ A F+ + RP L A +LG
Sbjct: 121 TVMRDLGRVAAAIDFFRGAVDLRPEQLAARDNLG 154
>gi|449670005|ref|XP_002166997.2| PREDICTED: tetratricopeptide repeat protein 14 homolog [Hydra
magnipapillata]
Length = 222
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN--KEALEFVKRLIDIEPNEVEWK--LL 186
E + F++ + P NVEA V +G ++ N KEA++ K+ +DI+PN K L+
Sbjct: 39 EARDSFDQAIAFYPNNVEAY--VARGALKANSNQLKEAIQDFKKALDIKPNHKNGKKYLI 96
Query: 187 QAL-----CYELMGKLSTAKRLFKDIL 208
+ L YE K A R +KDIL
Sbjct: 97 ETLFSLSKGYEKDSKWKEACRCYKDIL 123
>gi|449106403|ref|ZP_21743069.1| hypothetical protein HMPREF9729_01334 [Treponema denticola ASLM]
gi|451968112|ref|ZP_21921341.1| hypothetical protein HMPREF9728_00512 [Treponema denticola US-Trep]
gi|448964916|gb|EMB45582.1| hypothetical protein HMPREF9729_01334 [Treponema denticola ASLM]
gi|451703069|gb|EMD57451.1| hypothetical protein HMPREF9728_00512 [Treponema denticola US-Trep]
Length = 992
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|449107783|ref|ZP_21744430.1| hypothetical protein HMPREF9722_00126 [Treponema denticola ATCC
33520]
gi|448962734|gb|EMB43421.1| hypothetical protein HMPREF9722_00126 [Treponema denticola ATCC
33520]
Length = 992
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 440 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|298491604|ref|YP_003721781.1| hypothetical protein Aazo_2811 ['Nostoc azollae' 0708]
gi|298233522|gb|ADI64658.1| Tetratricopeptide repeat protein ['Nostoc azollae' 0708]
Length = 285
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMR------RGRNKEA-----LEFVKRLIDIEPNEVEWK 184
+E +L++EP N ALK ++Q ++ RG K A +E +++L + P + E+
Sbjct: 60 YELVLQREPENQTALKGLVQARLQLLSQKARGEVKPADIQAVIEPLEKLAKLNPQQSEYG 119
Query: 185 LLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+L A + + A + ++ IL +P L+AL +
Sbjct: 120 VLLAQAKQQIADNEGAAQTYRSILATKPGDLKALQGM 156
>gi|429760702|ref|ZP_19293168.1| tetratricopeptide repeat protein [Veillonella atypica KON]
gi|429176960|gb|EKY18310.1| tetratricopeptide repeat protein [Veillonella atypica KON]
Length = 276
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 37/73 (50%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
++ P N +A V G + + K+ D++PN V A+ Y+L G+L+
Sbjct: 143 IKDNPNNADAYSVRGFATALNGDTTKGIADTKKAYDLDPNNVANYYNMAMVYKLQGQLNE 202
Query: 200 AKRLFKDILKERP 212
+K+ F+ +L++ P
Sbjct: 203 SKQWFEKVLEKDP 215
>gi|170698434|ref|ZP_02889507.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
gi|170136687|gb|EDT04942.1| TPR repeat-containing protein [Burkholderia ambifaria IOP40-10]
Length = 612
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 45/93 (48%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E E + L P +V+AL + ++G++ EA + V R +++ P + +L
Sbjct: 18 AEAEHGYRAALGTNPADVDALHLFGVLRHQQGQHAEAADLVGRAVELRPGDAALQLNLGN 77
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ +G+L A F++ L P A ++LG
Sbjct: 78 ALKALGRLDEAIERFRNALTLAPEFPLAHYNLG 110
>gi|340712835|ref|XP_003394959.1| PREDICTED: intraflagellar transport protein 88 homolog [Bombus
terrestris]
Length = 796
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 10/120 (8%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
PG + + + E DA K + + + P N E + + + ++AL +
Sbjct: 575 PGVL---QKVGEMYDAGGDKQQAYQFYSDSYRFFPANFEVIDWLGSYFVSMQLAEKALVY 631
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
K+ +++ P+E W+LL A C +G+ A ++DI + P L+R DLG
Sbjct: 632 FKKAVELAPDEPRWRLLVAACLRRIGQFHKAVLEYQDIHNKFPENIECLKFLVRLCSDLG 691
>gi|261420022|ref|YP_003253704.1| hypothetical protein GYMC61_2632 [Geobacillus sp. Y412MC61]
gi|319766836|ref|YP_004132337.1| hypothetical protein [Geobacillus sp. Y412MC52]
gi|261376479|gb|ACX79222.1| Tetratricopeptide TPR_2 repeat protein [Geobacillus sp. Y412MC61]
gi|317111702|gb|ADU94194.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacillus sp.
Y412MC52]
Length = 1385
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
E ++ ++ + R R +EA +++RL+ P++VE ++LQA+ + G+ A+R + I
Sbjct: 1201 EFVEYLLAADEERKR-EEAKRWLERLLAERPDDVELRVLQAVVWLQEGQHEKAERQLEAI 1259
Query: 208 LKERPLLLRALHDLG 222
+ E PL AL LG
Sbjct: 1260 VAEEPLAREALMLLG 1274
>gi|375011677|ref|YP_004988665.1| cytochrome c biogenesis factor [Owenweeksia hongkongensis DSM
17368]
gi|359347601|gb|AEV32020.1| cytochrome c biogenesis factor [Owenweeksia hongkongensis DSM
17368]
Length = 657
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Query: 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKE-ALEFVKRLIDIEPNEVEWK 184
L+ K V M +L N +A G R +E +L+F + I++ P ++
Sbjct: 486 LVNKVGVNAMLARLNTMSYDNADAWTAYRIGESFRESGQETSLKFYSKAIELAPYVPDFM 545
Query: 185 LLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG-RYVSM 227
+A +G+L A LFK +LKE+P AL++LG Y+ M
Sbjct: 546 NKKATALAGVGQLDEAVTLFKKLLKEQPQHAEALNNLGYTYLQM 589
>gi|32401058|gb|AAP80732.1|AF521959_1 putative intraflagellar transport protein IFT88 [Trypanosoma
brucei]
Length = 400
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 166 ALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205
A++F +R I+P EV+W+L+ A C+ G AKRL++
Sbjct: 361 AIQFFERASQIQPQEVKWQLMVASCHRRRGDYVQAKRLYE 400
>gi|159904280|ref|YP_001551624.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
gi|159889456|gb|ABX09670.1| Tfp pilus assembly protein PilF [Prochlorococcus marinus str. MIT
9211]
Length = 270
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 84 KAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKE 143
K +I L ++ +L F S+L KM L+E RD K+ + +E+ L+
Sbjct: 12 KKLILLIATLCYLLFFASSLEVRATESLKMLFDRGLQESRDGDFLKAL--DTWEQFLKLS 69
Query: 144 PRNVEALKVVMQGNMRR--GRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201
P + AL +GN+R G + A+ KR I++ P E++ + + + E++GK A
Sbjct: 70 PEDAAALS--NRGNVRLLLGDPEGAIVDQKRAINLLPEEIDPYMNKGIAEEVLGKWDEAV 127
Query: 202 RLFKDILKERP 212
+ ++ IL P
Sbjct: 128 KDYELILAREP 138
>gi|389796943|ref|ZP_10199989.1| TPR repeat protein [Rhodanobacter sp. 116-2]
gi|388448036|gb|EIM04027.1| TPR repeat protein [Rhodanobacter sp. 116-2]
Length = 428
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 38/86 (44%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
E ++ K LE +P N EAL V + RG A E +++ + I+P E ++ +
Sbjct: 15 AEALYRKALETQPDNAEALNFVAMCELGRGEFDSAREHLEKAVHIDPEEANFRKNLGILQ 74
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRA 217
+G A F ++ P L A
Sbjct: 75 LALGHAQDAIDTFDQVIAMDPKELSA 100
>gi|386812651|ref|ZP_10099876.1| peptidase [planctomycete KSU-1]
gi|386404921|dbj|GAB62757.1| peptidase [planctomycete KSU-1]
Length = 619
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
SE E +++++ P + +A ++ ++G EA++ K++I +P++ L +
Sbjct: 388 SEAIEAYQQVITINPHDTKAHIMLGSAYSKQGCYTEAIDVFKKVIYSKPDDTHAYFLLGV 447
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSL 234
YE +G + A +K + +P D G Y ++ + + L
Sbjct: 448 AYEKLGSYTEAIDAYKQAISIKP------DDAGMYYNLGMTYEKL 486
>gi|260429310|ref|ZP_05783287.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
gi|260419933|gb|EEX13186.1| tetratricopeptide TPR_2 repeat protein [Citreicella sp. SE45]
Length = 815
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 46/86 (53%)
Query: 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202
+P V ++ +++Q ++R G EA ++ ++ P+ + +LL A LMG+ A+R
Sbjct: 549 DPEAVRSVILIVQTHLRDGEVDEARAYLDEVLARAPDVPDLRLLDADLNALMGRTELAER 608
Query: 203 LFKDILKERPLLLRALHDLGRYVSMT 228
++D++ + P A+ L +S +
Sbjct: 609 GYRDLIADAPENETAVRKLASILSAS 634
>gi|308271574|emb|CBX28182.1| hypothetical protein N47_G35060 [uncultured Desulfobacterium sp.]
Length = 490
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+S+ F+K LE+ P + + L+ + + + G+ EA + ++ + + P++ E L
Sbjct: 333 RSDAIAYFKKALEENPFDPDILRDLGKVYFQDGQYPEAQKTLEGAVSLAPDDPETLLFLG 392
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
GK + A++LF I ++ P RAL+ LG
Sbjct: 393 RIKAETGKFNDARKLFLTITEKYPYYKRALYLLG 426
>gi|406910680|gb|EKD50637.1| hypothetical protein ACD_62C00471G0002 [uncultured bacterium]
Length = 330
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 106 SVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK 164
S+AL P A NL L +E + F++ L P++ EA+ N+R R
Sbjct: 142 SIALKPDAPNAYYNLGLAYQGLGKFAESIDAFKRALVISPKHEEAMISSGLANVRLQRYS 201
Query: 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
EAL +R+I+I N + Q MGK A ++ +K P +A LG
Sbjct: 202 EALLSFQRVIEINANNAQAHFYQGYVLIKMGKNHEAYLAYQAAVKADPKFTKAYFQLG 259
>gi|390335042|ref|XP_782701.2| PREDICTED: intraflagellar transport protein 88 homolog
[Strongylocentrotus purpuratus]
Length = 816
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+ + +R I+PN+V+W+L+ A C+ G A
Sbjct: 604 PSNIEIIEWLGAYFIDSQFVEKAIHYFERAAVIQPNQVKWQLMIASCHRRSGNYQQALET 663
Query: 204 FKDILKERP-------LLLRALHDLG 222
+K I K+ P L+R DLG
Sbjct: 664 YKKIHKKFPDNVECLKFLVRLCSDLG 689
>gi|125975162|ref|YP_001039072.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|256003175|ref|ZP_05428167.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281418417|ref|ZP_06249436.1| peptidase S41 [Clostridium thermocellum JW20]
gi|385777647|ref|YP_005686812.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|419722800|ref|ZP_14249937.1| peptidase S41 [Clostridium thermocellum AD2]
gi|419726301|ref|ZP_14253324.1| peptidase S41 [Clostridium thermocellum YS]
gi|125715387|gb|ABN53879.1| peptidase S41 [Clostridium thermocellum ATCC 27405]
gi|255992866|gb|EEU02956.1| peptidase S41 [Clostridium thermocellum DSM 2360]
gi|281407501|gb|EFB37760.1| peptidase S41 [Clostridium thermocellum JW20]
gi|316939327|gb|ADU73361.1| peptidase S41 [Clostridium thermocellum DSM 1313]
gi|380770353|gb|EIC04250.1| peptidase S41 [Clostridium thermocellum YS]
gi|380781180|gb|EIC10841.1| peptidase S41 [Clostridium thermocellum AD2]
Length = 745
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183
DAL E E ++K +E P A + G+ +EA+E + ++++I+P++++
Sbjct: 173 DALGKLDEAIECYDKAIELSPTYTNAYYNKSIAVFKMGKTEEAIELLDKVLEIDPDDLDA 232
Query: 184 KLLQALCYELMGKLSTAKRLFKDILKERP 212
+ C +GK A F +++ P
Sbjct: 233 ITSKGYCLNELGKYEKAIECFDTAIEKYP 261
>gi|270005777|gb|EFA02225.1| hypothetical protein TcasGA2_TC007886 [Tribolium castaneum]
Length = 298
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRR-GRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E M+EK E P + E L V MR+ GR++EA + + +D++P++
Sbjct: 200 EASVMYEKAAELRPHDYE-LAVAAATAMRQAGRHQEAERWYRTAVDLKPSDARSHTNLGA 258
Query: 190 CYELMGKLSTAKRLFKDILKERP 212
L GK S A +K+ L+ +P
Sbjct: 259 ILHLNGKYSEAASSYKEALRLQP 281
>gi|257457422|ref|ZP_05622592.1| putative TPR domain protein [Treponema vincentii ATCC 35580]
gi|257445151|gb|EEV20224.1| putative TPR domain protein [Treponema vincentii ATCC 35580]
Length = 1044
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E+F +L + ++ ALK+ Q G +++A E K+++ I P +E++ A Y L
Sbjct: 339 EIFGRLDAEHSNSLSALKLRGQLYALTGESEQAEETFKQILKIAPAAIEFRQELAEQYLL 398
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGR 223
K AK LK+RP + AL LGR
Sbjct: 399 AHKYEEAKEQLNLFLKQRPTDISALMALGR 428
>gi|170578566|ref|XP_001894461.1| TPR Domain containing protein [Brugia malayi]
gi|158598938|gb|EDP36695.1| TPR Domain containing protein [Brugia malayi]
Length = 311
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183
DA KS+ + + P N+ ++ + + ++A + ++ +EPNE++W
Sbjct: 83 DAEGDKSQAFQCYYDSYRYFPSNISTIEWLGAYYIDAQYPEKAAIYFEKASIMEPNEIKW 142
Query: 184 KLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
+L+ A C G A L++ I K P L+R DLG
Sbjct: 143 QLMMASCLRRSGNYQKAFELYQQIHKRFPENIECLKFLVRICTDLG 188
>gi|333995961|ref|YP_004528574.1| hypothetical protein TREAZ_2861 [Treponema azotonutricium ZAS-9]
gi|333735081|gb|AEF81030.1| tetratricopeptide repeat protein [Treponema azotonutricium ZAS-9]
Length = 461
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 142 KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201
++P + L+ + R +NKEA+ F+++ ID+ P++ E A CY + A+
Sbjct: 160 QDPEHAPTLRTLGHSFFRLKKNKEAMTFIRKAIDLAPDDKESLYTLAECYYEANQTEQAQ 219
Query: 202 RLF 204
R+F
Sbjct: 220 RIF 222
>gi|126660968|ref|ZP_01732056.1| MCP methyltransferase, CheR-type [Cyanothece sp. CCY0110]
gi|126617746|gb|EAZ88527.1| MCP methyltransferase, CheR-type [Cyanothece sp. CCY0110]
Length = 499
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F+++L+ + +A + Q +GR ++A+ + +RL+ I+ + L A E
Sbjct: 363 EQFQQILDINSNHTDAAYWIAQIYANQGRYQDAILYCERLLKIDSLAIAPHYLLARIAEE 422
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDL 221
GKL AK L K I+ P + A DL
Sbjct: 423 TGKLEEAKYLLKKIIYLDPNSVAAYLDL 450
>gi|53720143|ref|YP_109129.1| hypothetical protein BPSL2533, partial [Burkholderia pseudomallei
K96243]
gi|52210557|emb|CAH36540.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
Length = 436
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 101 SNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
++ R ++A P + A NL DA+ ++ + FE L +PR AL +
Sbjct: 14 AHFRAAIAAEPHFVAAHFNLGNALDAIGQHAQAQHAFEAALALQPRFALALFGLANTLAA 73
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214
RGR+++AL + + ++P+ V L + +G A R F L+ P L
Sbjct: 74 RGRHRDALPHYEHAVGLDPSFVLAWLNLGTAHHALGAHEMALRAFDQALRLDPSL 128
>gi|298708566|emb|CBJ30651.1| Intraflagellar transport particle protein [Ectocarpus siliculosus]
Length = 703
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
++A+ + + I+P EV+W+L+ C+ MG A L++ I E P L L
Sbjct: 539 EKAIHYFETAAQIQPTEVKWRLMVTSCFRRMGNYQKALELYEQIHTEYPENLECL 593
>gi|449126796|ref|ZP_21763074.1| hypothetical protein HMPREF9733_00477 [Treponema denticola SP33]
gi|448945737|gb|EMB26606.1| hypothetical protein HMPREF9733_00477 [Treponema denticola SP33]
Length = 939
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + +N EAL +++ N G EA+ ++DI+ +++E + +G
Sbjct: 440 YNKIIKNDAKNTEALAAILELNKNEGNTVEAVRLANEIVDIQTDKIEN--------DDIG 491
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 492 SLSKSVQLYEDAVK 505
>gi|332260274|ref|XP_003279212.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 1
[Nomascus leucogenys]
Length = 823
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 617 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 676
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 677 YKDTHRKFPENVECLRFLVRLCTDLG 702
>gi|332260276|ref|XP_003279213.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Nomascus leucogenys]
Length = 832
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 626 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 685
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 686 YKDTHRKFPENVECLRFLVRLCTDLG 711
>gi|218199588|gb|EEC82015.1| hypothetical protein OsI_25970 [Oryza sativa Indica Group]
Length = 1174
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
FEK+LE P N E+LK + + G N +A+E K++ I+P +
Sbjct: 457 FEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTRIDPKD 501
>gi|397526293|ref|XP_003833067.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Pan paniscus]
Length = 805
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 598 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 657
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 658 YKDTHRKFPENVECLRFLVRLCTDLG 683
>gi|332260278|ref|XP_003279214.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 3
[Nomascus leucogenys]
Length = 804
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 598 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 657
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 658 YKDTHRKFPENVECLRFLVRLCTDLG 683
>gi|384084415|ref|ZP_09995590.1| TPR domain protein [Acidithiobacillus thiooxidans ATCC 19377]
Length = 553
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
SE + + +E EP N E L + + R+G N++ALE++++ P++ E +
Sbjct: 458 SEASTLLHQAIELEPENPEILDSIGWLHHRQGDNQKALEYLQKAHQALPDDPELSMHLGR 517
Query: 190 CYELMGKLSTAKRLFKDILKERP 212
+GK A+ +++ L + P
Sbjct: 518 ILWALGKHQEARNVWQQALDKNP 540
>gi|119357636|ref|YP_912280.1| hypothetical protein Cpha266_1840 [Chlorobium phaeobacteroides DSM
266]
gi|119354985|gb|ABL65856.1| TPR repeat-containing protein [Chlorobium phaeobacteroides DSM 266]
Length = 3560
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 104 RPSVALPGKMRASENLKEKRDALMGKS----EVEEMFEKLLEKEPRNVEALKVVMQGNMR 159
RPS A G+ E++K +R + + E E +++++L +P ++EAL+ + R
Sbjct: 2212 RPSHA-AGRSTKEESVKLQRALKLHQEGRLDEAEVIYQEILSIQPLHIEALQFLASMATR 2270
Query: 160 RGRNKEALEFVKRLIDIEPNE-VEWKLLQALCYEL 193
R + +A+ +R ++I+P+ V W L +EL
Sbjct: 2271 RKKYTDAVSLFERALEIDPDHPVSWCTLGIALHEL 2305
>gi|402901515|ref|XP_003913694.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Papio anubis]
Length = 805
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 598 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 657
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 658 YKDTHRKFPENVECLRFLVRLCTDLG 683
>gi|145515363|ref|XP_001443581.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410970|emb|CAK76184.1| unnamed protein product [Paramecium tetraurelia]
Length = 1153
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%)
Query: 137 EKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196
+K+LE EP +++AL + G+ KEAL+ +++++ I PN + + + C +G+
Sbjct: 299 DKVLEIEPNHIKALDCKIYCLSILGKYKEALDVIEKVLHINPNHLNSMINKVNCLRELGQ 358
Query: 197 LSTAKRLFKDILKERP 212
+ +L +LK+ P
Sbjct: 359 YQKSIQLADVVLKQDP 374
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 7/97 (7%)
Query: 123 RDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
+DAL+ KLLEK+P+N+E L Q + +EA+ + ++++I+PN ++
Sbjct: 571 KDALI-------CINKLLEKDPKNLELLLFKTQSLYLLDQFQEAINWADQVLEIDPNHLD 623
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALH 219
+A L+G A +L P R LH
Sbjct: 624 TLYCKADNLRLLGNYKDAIVWSDKVLAINPEHTRTLH 660
>gi|409202247|ref|ZP_11230450.1| putative serine/threonine protein kinase [Pseudoalteromonas
flavipulchra JG1]
Length = 850
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 45/222 (20%)
Query: 25 KSSFLSSPNKQKHHTLSFQQTQKQKFHSLFITNLSQSHIAKIPRSSLSPENK-IMKVLKE 83
K +FL+ N K + QK S++ +L + + + + L+ E + +KV++
Sbjct: 565 KGTFLAIQNSAK------DEYQKHALISIYY-HLINDYASALHHTELAYELRPTLKVIRN 617
Query: 84 KAVIFLAGSVIFLGSFGSNLRPSVALPGKMRAS----ENLKEKR-----DALMGK-SEVE 133
A+ + LG +G ALP AS +NLK + L+GK + E
Sbjct: 618 AALFNMK-----LGQYGE------ALPYLRAASHYGPDNLKTLKAIADISLLLGKLHDAE 666
Query: 134 EMFEKLLEKEPR-----NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+ ++ L+++ N A+ +++ G++ R ALEF +R + P+ VE L A
Sbjct: 667 KSYQALVKRSYTSTATFNNYAIVLMLLGDLER-----ALEFAERASQLAPSNVEILLNYA 721
Query: 189 LCYELMGKLSTAKRLFKDILKERP------LLLRALHDLGRY 224
Y LMG+ + A ++ IL P + ++AL LG++
Sbjct: 722 DIYSLMGEKAKASEVYLQILASDPASQVEVVRIQALAHLGKH 763
>gi|87199771|ref|YP_497028.1| TPR repeat-containing protein [Novosphingobium aromaticivorans DSM
12444]
gi|87135452|gb|ABD26194.1| TPR repeat protein [Novosphingobium aromaticivorans DSM 12444]
Length = 184
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 93 VIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVE---EMFEKLLEKEPRNVEA 149
V GS GS R S L RA LKE R AL+GK +V + FE L EP NV
Sbjct: 30 VGVTGSMGS-ARSSAPL--DPRAEVLLKEGR-ALLGKGDVAAATDSFEAALAIEPGNVGT 85
Query: 150 LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
L + R G +A+ + + ++ EPN V
Sbjct: 86 LVALADAARRDGLQGKAIHYYREALEREPNNV 117
>gi|156848456|ref|XP_001647110.1| hypothetical protein Kpol_1050p112 [Vanderwaltozyma polyspora DSM
70294]
gi|156117793|gb|EDO19252.1| hypothetical protein Kpol_1050p112 [Vanderwaltozyma polyspora DSM
70294]
Length = 1027
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 43/84 (51%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
+S+ E F+ L EP NVE+ + Q + GR + ++ ++ +++P+ + K A
Sbjct: 684 ESDAIEWFQSALRIEPNNVESWVGLGQSYLSCGRIEASIRVFEKATELDPDHLYAKYFTA 743
Query: 189 LCYELMGKLSTAKRLFKDILKERP 212
MG+ + +F++I+ E P
Sbjct: 744 QSLSEMGEYVKSISIFEEIIMETP 767
>gi|82617844|gb|ABB84838.1| Tetratricopeptide repeat-TPR protein [uncultured delta
proteobacterium DeepAnt-32C6]
Length = 333
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F + +E + R+V A+ + + ++G ++ALE +R ++I + L
Sbjct: 121 EAFRRAIELDGRDVIAVTALAKAYEQQGELEDALEQWERAVEIAAADAGLHLALGRTLAR 180
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGR 223
+G+L++A +K+ L+ P L A +LGR
Sbjct: 181 LGELTSAVDAYKEALRLEPGLASAWFNLGR 210
>gi|332711804|ref|ZP_08431735.1| glycosyltransferase involved in cell wall biogenesis [Moorea
producens 3L]
gi|332349782|gb|EGJ29391.1| glycosyltransferase involved in cell wall biogenesis [Moorea
producens 3L]
Length = 1427
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-WKLLQALCYE 192
+++ K+LE++P + EAL + + G+ A + + ++ EPN V+ W L LC +
Sbjct: 795 QLYYKILEQQPNHPEALYGLGVLAQQTGQYDTAEKLFRATVEAEPNSVKAWFSLGNLC-Q 853
Query: 193 LMGKLSTAKRLFKDILKERPLLLRALHDLG 222
G+LS + ++ +L +P L+ ++LG
Sbjct: 854 GQGQLSDSVECYQRVLTIQPNLVPVYNNLG 883
>gi|289191717|ref|YP_003457658.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
gi|288938167|gb|ADC68922.1| TPR repeat-containing protein [Methanocaldococcus sp. FS406-22]
Length = 308
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E + F+K+ E+ +++ AL ++Q + GR +ALE+ K+ + + P++ L + +
Sbjct: 192 GEALKCFKKVFERNDKDIRALMYIIQILIYLGRLSQALEYTKKALKLNPDDPLLYLYKGI 251
Query: 190 CYELMGKLSTAKRLFKDILKERP 212
+GK A + F +L+ P
Sbjct: 252 ILNKLGKYKDAIKYFDKVLEINP 274
>gi|222637020|gb|EEE67152.1| hypothetical protein OsJ_24219 [Oryza sativa Japonica Group]
Length = 1053
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
FEK+LE P N E+LK + + G N +A+E K++ I+P +
Sbjct: 336 FEKVLEVHPENCESLKAIGHIYAKSGENDKAIETFKKVTRIDPKD 380
>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
chloroplastic [Vitis vinifera]
gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
Length = 567
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 128 GKSEVEEMFEKLLEKEPR-NVEALKVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEWK 184
G E + ++++ K + N+ + V++ G + GR +EA++F + L PN V +
Sbjct: 217 GADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYN 276
Query: 185 -LLQALCYELMGKLSTAKRLFKDI 207
LL++LCYE G+ AK L ++
Sbjct: 277 ILLRSLCYE--GRWEKAKELLAEM 298
>gi|449125252|ref|ZP_21761554.1| hypothetical protein HMPREF9723_01598 [Treponema denticola OTK]
gi|448939221|gb|EMB20138.1| hypothetical protein HMPREF9723_01598 [Treponema denticola OTK]
Length = 608
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ K+++ + N EAL +++ N G EA+ +++DI+ +++E + +G
Sbjct: 56 YNKIIKNDANNTEALAAILELNKNEGNTVEAVRLANKIVDIQTDKIEN--------DDIG 107
Query: 196 KLSTAKRLFKDILK 209
LS + +L++D +K
Sbjct: 108 SLSKSVQLYEDAVK 121
>gi|297274066|ref|XP_002800721.1| PREDICTED: intraflagellar transport protein 88 homolog [Macaca
mulatta]
Length = 805
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 598 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 657
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 658 YKDTHRKFPENVECLRFLVRLCTDLG 683
>gi|219849276|ref|YP_002463709.1| hypothetical protein Cagg_2400 [Chloroflexus aggregans DSM 9485]
gi|219543535|gb|ACL25273.1| TPR repeat-containing protein [Chloroflexus aggregans DSM 9485]
Length = 520
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%)
Query: 158 MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+RRGR A + +++++ P+++E + + LCY+ + + S A LF+ +L+ P +A
Sbjct: 411 IRRGRYDLAAKEFQQVLEQWPDDIETQFMLGLCYKELLEPSRAIPLFEKVLRRNPRHAQA 470
Query: 218 LHDLG 222
L+ LG
Sbjct: 471 LYYLG 475
>gi|374851942|dbj|BAL54888.1| spermine/spermidine synthase family protein [uncultured Acidobacteria
bacterium]
Length = 1100
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 4/127 (3%)
Query: 103 LRPSVALPGKMRASENLKEKRDA-LMGKSEV---EEMFEKLLEKEPRNVEALKVVMQGNM 158
LR SV + R L + A L G +E+ EE+ + L P + A +
Sbjct: 907 LRESVERISRARGDLRLLSQYAACLAGANELAMLEEVCRRWLALAPGSGRAWFHLAVIRS 966
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
++G+ EAL F +R ++ +P + + + L A+ + +G+ + A+ LF++I ++ A
Sbjct: 967 QQGKWAEALTFARRSVEADPRDFQARTLLAMIHAELGETARARALFEEIARDHADQALAF 1026
Query: 219 HDLGRYV 225
++ G ++
Sbjct: 1027 YNYGLFL 1033
>gi|225874097|ref|YP_002755556.1| hypothetical protein ACP_2527 [Acidobacterium capsulatum ATCC
51196]
gi|225793339|gb|ACO33429.1| TPR domain protein [Acidobacterium capsulatum ATCC 51196]
Length = 390
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
++ E ++ LL + +NVEA + R EA+++ +R + ++P+ +L AL
Sbjct: 42 AQAESIWHTLLTQNAKNVEACAHLGLDEARTQNYPEAIQYYRRALALDPSLHGLRLDLAL 101
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLR 216
Y MGK A L + L + P LR
Sbjct: 102 SYFKMGKFPQAIPLLAEELHQHPGDLR 128
>gi|359408303|ref|ZP_09200774.1| tetratricopeptide repeat protein [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676713|gb|EHI49063.1| tetratricopeptide repeat protein [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 185
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG--NMRRGRNKEA 166
LPG + LK+ +A K+ + ++ ++ + P N KV+ QG M GR +EA
Sbjct: 29 LPGLFNS---LKDAPNAKAAKTTADRIW-RIWSENPENQLLTKVLNQGVMQMNAGRLREA 84
Query: 167 LEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+I+ +P+ E +A Y +MG +KR + P AL LG
Sbjct: 85 ERLFTSVIEADPDFAEAWNKRATVYFIMGAYDLSKRDIAQTIAREPQHFGALSGLG 140
>gi|435850371|ref|YP_007311957.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
gi|433661001|gb|AGB48427.1| tetratricopeptide repeat protein [Methanomethylovorans hollandica
DSM 15978]
Length = 504
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 46/93 (49%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
SE E F+K +E P+N +A G+N+EA++ + I ++PN V++ + +
Sbjct: 45 SESIEAFDKAIELNPQNADAWAGKGMALSETGKNEEAIQAYDKAIQLKPNNVKFWSEKGI 104
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
MG+ A + + ++ PL A ++ G
Sbjct: 105 ALRKMGRYEEAIQAYDKAIELDPLDGFAWYNKG 137
>gi|31442384|ref|NP_852641.1| Clp protease ATP binding subunit [Eimeria tenella strain Penn
State]
gi|31322476|gb|AAO40242.1| clp protease ATP-binding subunit [Eimeria tenella]
Length = 741
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 98 SFGSNLRPSVALPGKMRASENLKEKRDALMGKS-EVEEMFEKLLEKEPRNVEALKVVMQG 156
++ +N P++ +P ++ N+ KR+ L+G+ E++ + E L K RN +++ G
Sbjct: 151 NYINNFLPNINIPEVLKDFLNILNKRNNLIGRDKEIKNIIEILXRKLNRN-----IILLG 205
Query: 157 NMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
N+ G+ L V++L+ + PN++ +L
Sbjct: 206 NIGIGK----LSIVEKLVYLIPNKIFLEL 230
>gi|350422749|ref|XP_003493270.1| PREDICTED: intraflagellar transport protein 88 homolog [Bombus
impatiens]
Length = 796
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++AL + K+ +++ P+E W+LL A C +G+ A ++DI + P L+R
Sbjct: 626 EKALVYFKKAVELAPDEPRWRLLVAACLRRIGQFHKAVLEYQDIHNKFPENIECLKFLVR 685
Query: 217 ALHDLG 222
DLG
Sbjct: 686 LCSDLG 691
>gi|334121332|ref|ZP_08495403.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
gi|333455148|gb|EGK83806.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus
vaginatus FGP-2]
Length = 1075
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EVE 182
+AL SE FEK LE +P+ A K + GRN EA+ K+ ++I+P
Sbjct: 295 NALGRNSEAIAAFEKALEIDPKAHIAWKGLGNALNALGRNSEAIAAFKKALEIDPKFHHA 354
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
W L A +L G+ S A F+ L+ P A H LG
Sbjct: 355 WNGLGAPLNDL-GRYSEAIAAFEKALEIDPKFHFAWHGLG 393
>gi|172037927|ref|YP_001804428.1| hypothetical protein cce_3014 [Cyanothece sp. ATCC 51142]
gi|354556626|ref|ZP_08975918.1| hypothetical protein Cy51472DRAFT_4715 [Cyanothece sp. ATCC 51472]
gi|171699381|gb|ACB52362.1| hypothetical protein cce_3014 [Cyanothece sp. ATCC 51142]
gi|353551400|gb|EHC20804.1| hypothetical protein Cy51472DRAFT_4715 [Cyanothece sp. ATCC 51472]
Length = 447
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 42/79 (53%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
+ +P + E+ ++ + + + +A++ +K +++ EP+ +E KL A YE+ G +
Sbjct: 323 IRNDPNDTESKLTLVNQYLNQEKVDQAIDLLKTIVEQEPDNLERKLQLANLYEITGNIQQ 382
Query: 200 AKRLFKDILKERPLLLRAL 218
A+ ++ IL E AL
Sbjct: 383 AESVYDRILAENSSYFNAL 401
>gi|406958133|gb|EKD85906.1| hypothetical protein ACD_37C00579G0009 [uncultured bacterium]
Length = 228
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKD 206
++A++ + G+ + A++ K L++ P +VE AL Y ++GK TAK ++
Sbjct: 6 IQAIQTALTGDWQ-----AAIQVNKFLLEENPKDVEALNRIALAYTVIGKTKTAKTTYQK 60
Query: 207 ILKERPLLLRALHDLGRYVS---------MTLQIQSLF 235
+L+ PL A+ +L + S MTLQ+ ++F
Sbjct: 61 VLEIDPLNSIAIKNLKKIKSDSSNNSGEGMTLQVNNIF 98
>gi|428179747|gb|EKX48617.1| hypothetical protein GUITHDRAFT_68646, partial [Guillardia theta
CCMP2712]
Length = 219
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 127 MGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MGK E E FE+ L+ +P +V + RRGR+ +A E ++ + I+P
Sbjct: 120 MGKHKEAAEKFEQGLQVDPTSVPTYQAYGLMEARRGRHAKARELFEKGVRIDPGHAPIFH 179
Query: 186 LQALCYELMGKLSTAKRLFKDILKERP 212
A E +G TA+ LF + P
Sbjct: 180 AWACMEESLGNYDTARDLFNQGVASAP 206
>gi|407784362|ref|ZP_11131519.1| TPR repeat-containing protein, partial [Oceanibaculum indicum P24]
gi|407197053|gb|EKE67170.1| TPR repeat-containing protein, partial [Oceanibaculum indicum P24]
Length = 382
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 49/93 (52%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E E ++ ++L ++ + +AL ++ Q +G + LE ++R I + P +++ +
Sbjct: 40 AEAETLYRQILLQDQKQPDALHLLGQIERHKGNAQAGLEMIERAIALRPESAPFRMTRGN 99
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+MGK + A +++ L+ P A ++LG
Sbjct: 100 TLRVMGKRAAAIAAYREALEINPDFADAHNNLG 132
>gi|326511269|dbj|BAJ87648.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 842
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F+K ++ +P +V+AL + NM GR A E R++ I PN +L +A+
Sbjct: 433 EEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLG 492
Query: 194 MGKLSTAKRLFKDILK 209
G+ AK+ K+ K
Sbjct: 493 QGESEEAKKALKEAFK 508
>gi|326510261|dbj|BAJ87347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 842
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E F+K ++ +P +V+AL + NM GR A E R++ I PN +L +A+
Sbjct: 433 EEFQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLG 492
Query: 194 MGKLSTAKRLFKDILK 209
G+ AK+ K+ K
Sbjct: 493 QGESEEAKKALKEAFK 508
>gi|410860764|ref|YP_006975998.1| hypothetical protein amad1_05625 [Alteromonas macleodii AltDE1]
gi|410818026|gb|AFV84643.1| TPR domain-containing protein [Alteromonas macleodii AltDE1]
Length = 604
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 115 ASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK--EALEFVKR 172
AS ++ KRDA E E +KLLE EP+NV+AL + GN++R N+ EA+ K+
Sbjct: 148 ASILIENKRDA-----EAERYLKKLLETEPKNVKALNNL--GNIKRRNNQFNEAILLYKK 200
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ + E A + L G L A +K+ L P
Sbjct: 201 ALSTGQSTAELFQNLAAAFALNGLLDEAFATYKEGLTTFP 240
>gi|301060056|ref|ZP_07200929.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
gi|300445819|gb|EFK09711.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
Length = 751
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ +L++EP N+ A + + +MR A + KR+++ +P+ VE +L A Y G
Sbjct: 395 YRYVLDEEPGNLRAAMNLAKAHMRNSEPMLAEQTYKRIVEQDPSAVEARLDLADYYAGKG 454
Query: 196 KLSTAKRLFKDILKERPLLLRALHDLG 222
K AK + + +L P RAL +G
Sbjct: 455 KPDLAKEMLEAVLTIDPDNRRALSGMG 481
>gi|302037836|ref|YP_003798158.1| hypothetical protein NIDE2523 [Candidatus Nitrospira defluvii]
gi|300605900|emb|CBK42233.1| conserved protein of unknown function, contains TPR repeats
[Candidatus Nitrospira defluvii]
Length = 567
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEA---LKVVMQGNMRRGRNKEA 166
P + A NL L ++ + +E++L P + EA L VV++ +GR EA
Sbjct: 122 PRYIEARTNLGNAYKELGRLADAQAAYEQVLTLNPDHAEAHNNLGVVLK---EQGRLDEA 178
Query: 167 LEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
E +R I ++P+ E + L G+L A R F+ L+ P AL++LG
Sbjct: 179 AESYRRAIALKPSHAEAQNNLGLVLLEQGRLDDAIRCFERALQIVPGYGTALYNLG 234
>gi|39998114|ref|NP_954065.1| glycosyltransferase and TPR domain-containing protein [Geobacter
sulfurreducens PCA]
gi|39985059|gb|AAR36415.1| glycosyltransferase and TPR domain protein [Geobacter sulfurreducens
PCA]
Length = 2401
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP-NEVEWKLLQA 188
+E + F + LE +P + +AL + +GRN E E R ++ EP N
Sbjct: 2049 AEAADAFSRALETDPADPKALCGLGMARCAQGRNAEGFELYGRALEAEPENLTAVHESVR 2108
Query: 189 LCYELMGKLSTAKRLFKDILKERP 212
L YEL G+ S A + + L+ P
Sbjct: 2109 LAYEL-GRFSEAAKRLESYLRHHP 2131
>gi|401679247|ref|ZP_10811180.1| tetratricopeptide repeat protein [Veillonella sp. ACP1]
gi|400219829|gb|EJO50691.1| tetratricopeptide repeat protein [Veillonella sp. ACP1]
Length = 244
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
++ P N +A + G + + K+ D++PN V A+ Y+L G+L
Sbjct: 111 IKNNPNNADAYSIRGFATALNGDTTKGIADTKKAYDLDPNNVANYYNMAMVYKLQGQLPE 170
Query: 200 AKRLFKDILKERP 212
+K+ F+ +L++ P
Sbjct: 171 SKQWFEKVLEKDP 183
>gi|158521101|ref|YP_001528971.1| hypothetical protein Dole_1087 [Desulfococcus oleovorans Hxd3]
gi|158509927|gb|ABW66894.1| Tetratricopeptide TPR_2 repeat protein [Desulfococcus oleovorans
Hxd3]
Length = 808
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 36/80 (45%)
Query: 133 EEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYE 192
E + K L +P+N EAL + +R GR +EA+ I + P + E A Y
Sbjct: 230 ESLIRKALRMDPKNGEALSELANLYLREGRIEEAVPVFLAAIRVSPEKAELHGALATAYS 289
Query: 193 LMGKLSTAKRLFKDILKERP 212
+ G S A F+ L+ P
Sbjct: 290 IRGATSQAMASFEKALELDP 309
>gi|434399178|ref|YP_007133182.1| TPR repeat-containing protein [Stanieria cyanosphaera PCC 7437]
gi|428270275|gb|AFZ36216.1| TPR repeat-containing protein [Stanieria cyanosphaera PCC 7437]
Length = 458
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P + ++L N+++G + AL V++++ +PN + W+L A YEL K + A+ +
Sbjct: 340 PEDFDSLVNRANQNIQQGNLEGALPIVEQIVQKQPNNLNWQLNLAKIYELKHKPTQAEVV 399
Query: 204 FKDILKERPLLLRALHDLGRYV 225
+ IL++ L AL +G+ V
Sbjct: 400 YDRILQQESNNLSAL--IGKAV 419
>gi|397690319|ref|YP_006527573.1| TPR repeat-containing protein [Melioribacter roseus P3M]
gi|395811811|gb|AFN74560.1| TPR repeat-containing protein [Melioribacter roseus P3M]
Length = 470
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 87 IFLAGSVIFLGSFGSNLRPSVAL-PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPR 145
IFL F ++ R +++L P + N+ D L E E EK L EP
Sbjct: 80 IFLNNMFRFAEAYNC-FRKALSLNPNDVDTHINIAIAEDNLGMFEEAVESLEKALAIEPH 138
Query: 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205
N E L + ++ + EA+E+ + ++ P+ +E CYE MG+L A ++
Sbjct: 139 NEEILYNLGALYEKKEKYNEAVEYFRMAVEKAPDYLEAWYELGYCYESMGELKDALAAYE 198
Query: 206 DILKERPLLLRALHDLG 222
L P ++ G
Sbjct: 199 MYLNGDPENYAGWYNKG 215
>gi|126656202|ref|ZP_01727586.1| hypothetical protein CY0110_03929 [Cyanothece sp. CCY0110]
gi|126622482|gb|EAZ93188.1| hypothetical protein CY0110_03929 [Cyanothece sp. CCY0110]
Length = 285
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 46/83 (55%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+EP N AL +++ +R+G + A+ ++RL + P + ++ +L A + +
Sbjct: 61 YQLVLEREPDNENALLGLLETRLRQGDLEAAITPLERLAQLNPEQPDYGILLAQSQQQLN 120
Query: 196 KLSTAKRLFKDILKERPLLLRAL 218
A +++I+ P +RAL
Sbjct: 121 NYEAALNTYQEIIAANPGDMRAL 143
>gi|385809655|ref|YP_005846051.1| hypothetical protein IALB_1072 [Ignavibacterium album JCM 16511]
gi|383801703|gb|AFH48783.1| TPR repeat protein [Ignavibacterium album JCM 16511]
Length = 471
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 41/92 (44%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
+ EE K+L+ +P N +A + R+ + EA+ + +R I I+P+ VE C
Sbjct: 126 QAEESLRKVLDIDPENEDAFFSLGLLYQRQFKYAEAIPYFERAIKIDPDYVEVYYELGFC 185
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
YE + A ++ L P ++ G
Sbjct: 186 YEALNNFDKALEAYEKFLDFDPYNASGWYNKG 217
>gi|242076856|ref|XP_002448364.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
gi|241939547|gb|EES12692.1| hypothetical protein SORBIDRAFT_06g025910 [Sorghum bicolor]
Length = 1069
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE----VEWK--LLQAL 189
FEK+LE P N E+LK + + + G ++A+E K++ I+P + VE L+++
Sbjct: 375 FEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFVELGELLVESD 434
Query: 190 CYELMGKLSTAKRLFKDILKERPLLL 215
M L TA+ L K + P+ L
Sbjct: 435 WAAAMEYLKTARNLLKKAGEAVPVEL 460
>gi|325295455|ref|YP_004281969.1| hypothetical protein Dester_1275 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065903|gb|ADY73910.1| Tetratricopeptide TPR_1 repeat-containing protein
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 597
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 114 RASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRL 173
R + NLK+ DA EE +K L +P+N +ALK++ ++ +G KEA + KR+
Sbjct: 105 RFTANLKKLEDA-------EEFAKKALSIDPKNPKALKLLAGISIIKGNKKEAERYYKRI 157
Query: 174 IDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ P++ + +L L Y K A++L + LK+ P
Sbjct: 158 LSTAPDKSTYIMLANL-YINEKKYLEAQKLLTEALKKYP 195
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 102 NLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG 161
N + L GK+ LKEK + E+ EK+L+K P N+ ALK + +++
Sbjct: 230 NFESAYVLLGKIY----LKEK-----DYKKAEKFLEKVLDKNPDNIYALKEIFIIYLKQN 280
Query: 162 RNKEALEFVKRLIDIEP 178
+ EAL + RL+ ++P
Sbjct: 281 KTNEALNVINRLVKLDP 297
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEWKLLQAL 189
+E F+ E E RNV + ++ G + G ALE ++++ +PNE+ + + +
Sbjct: 488 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 547
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALH 219
C + G +S ++ F + KE ++ R H
Sbjct: 548 CSHV-GMISEGQKHFNSMYKEHGIVPRMEH 576
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEWKLLQAL 189
+E F+ E E RNV + ++ G + G ALE ++++ +PNE+ + + +
Sbjct: 506 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 565
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALH 219
C + G +S ++ F + KE ++ R H
Sbjct: 566 CSHV-GMISEGQKHFNSMYKEHGIVPRMEH 594
>gi|51783969|ref|NP_001001725.1| intraflagellar transport protein 88 homolog [Danio rerio]
gi|45479854|gb|AAS66768.1| Ift88 [Danio rerio]
Length = 824
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++A+++ +R I+P +V+W+L+ A CY G A +K+I ++ P L+R
Sbjct: 638 EKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPENVECLRFLVR 697
Query: 217 ALHDLG 222
D+G
Sbjct: 698 LCTDMG 703
>gi|428178691|gb|EKX47565.1| hypothetical protein GUITHDRAFT_60175, partial [Guillardia theta
CCMP2712]
Length = 179
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE-PNEVEWKLLQAL- 189
+E +E+ +++P++ + + V R+ + KEA++ ++++ + +E EW QA
Sbjct: 52 AQEAYERAWKEKPKDGDVMIQVGSSLRRQKKYKEAIKQYRKVVRLSTASEQEWSDAQAWI 111
Query: 190 --CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
YELMGK A+ ++ ++ RA ++LG
Sbjct: 112 GNVYELMGKHKEAEAAYRQVIARVRRHGRACNNLG 146
>gi|357023782|ref|ZP_09085951.1| TPR and WD-40 repeat-containing protein [Mesorhizobium amorphae
CCNWGS0123]
gi|355544324|gb|EHH13431.1| TPR and WD-40 repeat-containing protein [Mesorhizobium amorphae
CCNWGS0123]
Length = 539
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 88 FLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDAL--------------MGK-SEV 132
FL G+ + SFG + K R NL ++ DA GK +
Sbjct: 323 FLRGNESYKYSFGVEETRIHCVLVKTRTGRNLGDRLDARSVASVLEQATKFHEAGKLANA 382
Query: 133 EEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-WKLLQALCY 191
E + ++LE PR+ L + Q + + A + L++I PN V+ W L A+
Sbjct: 383 ENAYRQILEVAPRHARTLYGLGQLLAAKADHWSAADTFGSLVEIAPNSVKAWSRL-AIEL 441
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232
+ + + S A F+ +L+ P L A + LGR ++ QI
Sbjct: 442 QALSRHSEAADAFRKVLELNPELPGAQYGLGRCLAELRQID 482
>gi|330509110|ref|YP_004385538.1| TPR-repeat-containing protein [Methanosaeta concilii GP6]
gi|328929918|gb|AEB69720.1| TPR-repeat protein [Methanosaeta concilii GP6]
Length = 722
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 104 RPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG-- 161
+P AL GK A ++L +A + + ++ +++K PRN + + QGN RG
Sbjct: 582 QPQYALIGKGMALDSLGRYDEAQEDYEQALKDYDDVIKKNPRNAQVM--YNQGNALRGLQ 639
Query: 162 RNKEALEFVKRLIDIEPNEVE-WK 184
R+ E+L+ R I++ P ++ W+
Sbjct: 640 RHNESLQAYDRAIELNPGYIDAWR 663
>gi|290474617|ref|YP_003467497.1| thioredoxin protein with protein prenylyltransferase [Xenorhabdus
bovienii SS-2004]
gi|289173930|emb|CBJ80717.1| putative thioredoxin protein with protein prenylyltransferase
[Xenorhabdus bovienii SS-2004]
Length = 292
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 32/185 (17%)
Query: 51 HSLFITNLSQSHIAKIPRSSL---------SPENKIMKVLKE---KAVIFLAGSVIFLGS 98
H+ I ++++S+IA + + SL SP+N L+E K AG L
Sbjct: 10 HTAHIIHINESNIASMIQHSLTQLVVFYFWSPQNLHCHELEETLDKLAHEYAGQFA-LAK 68
Query: 99 FGSNLRPSVALPGKMRASENL---KEKR-----DALMGKSEVEEMFEKLLEKEPRNVEAL 150
+ P+VA +R + + +E R + + + EMF + L ++ +++
Sbjct: 69 VDCDQLPNVAAQFGIRTAPTVIFVQEARPVHGFEGIQTDETIREMFSQFLTQQKKSL--- 125
Query: 151 KVVMQGNMR--RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL 208
+ Q N R G+N+EAL +K EP E E LL A Y + L A ++IL
Sbjct: 126 --LEQANERLAEGKNQEALPLLKEAHQAEPKETEITLLLAQVYISLNHLEDA----QNIL 179
Query: 209 KERPL 213
PL
Sbjct: 180 DTLPL 184
>gi|190338004|gb|AAI62512.1| Intraflagellar transport 88 homolog [Danio rerio]
Length = 824
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++A+++ +R I+P +V+W+L+ A CY G A +K+I ++ P L+R
Sbjct: 638 EKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYQKALETYKEIHRKFPENVECLRFLVR 697
Query: 217 ALHDLG 222
D+G
Sbjct: 698 LCTDMG 703
>gi|108805985|ref|YP_645922.1| hypothetical protein Rxyl_3205 [Rubrobacter xylanophilus DSM 9941]
gi|108767228|gb|ABG06110.1| Tetratricopeptide TPR_2 [Rubrobacter xylanophilus DSM 9941]
Length = 111
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EVEWKLLQALCYE 192
EMF +LLE++P N L + RRG EA + ++R + +P+ V ++ L YE
Sbjct: 7 EMFRRLLERDPDNPMVLYSLGSELFRRGEFGEAADLLRRAVRSKPDYSVAYRTLGRALYE 66
Query: 193 LMGKLSTAKRLFKD 206
L G+ A+R+F++
Sbjct: 67 L-GEDEEARRVFEE 79
>gi|340370412|ref|XP_003383740.1| PREDICTED: transmembrane and TPR repeat-containing protein 1-like
[Amphimedon queenslandica]
Length = 875
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 113 MRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKR 172
+A NL + L K + EE++++ ++ P +AL + + GRN EA+ FV +
Sbjct: 553 FKAFFNLANEMWNLGNKEKAEELYKESIKINPNYTDALIKLSSLLVSLGRNDEAILFVSQ 612
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL-------LLRALHDLG 222
+ ++ NE + A + G +S + L++ +L P L RAL LG
Sbjct: 613 SVKLKDNEPDVLHNSAAVLMMAGNVSWSISLWRKVLSLNPTHSEAMAGLARALRSLG 669
>gi|359476124|ref|XP_002282605.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
gi|296082021|emb|CBI21026.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL 213
R G EALEFV+R+ IEPN + W+ L + C + G+L + + K +++ P+
Sbjct: 360 RAGLVTEALEFVERM-PIEPNPIIWRTLISAC-RVHGELKLGESISKQLIRNEPM 412
>gi|405375375|ref|ZP_11029408.1| tetratricopeptide repeat protein [Chondromyces apiculatus DSM 436]
gi|397086387|gb|EJJ17505.1| tetratricopeptide repeat protein [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 185
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+K+L + ++V AL GR EAL +R I+++PNE E ALC +G
Sbjct: 25 FDKVLAVDAKHVPALTGKGASLATLGRFDEALRCFERAIEVDPNEAEAHREAALCQLELG 84
Query: 196 KLSTAKRLFKDILKERP 212
+ A +L + + P
Sbjct: 85 EPEAAAQLLQRATQLNP 101
>gi|332140650|ref|YP_004426388.1| TPR domain-containing protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550672|gb|AEA97390.1| TPR domain protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 604
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 115 ASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK--EALEFVKR 172
AS ++ KRDA E E +KLLE EP+NV+AL + GN++R N+ EA+ K+
Sbjct: 148 ASILIENKRDA-----EAERYLKKLLETEPKNVKALNNL--GNIKRRNNQFNEAILLYKK 200
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ + E A + L G L A +K+ L P
Sbjct: 201 ALSTGQSTAELFQNLAAAFALNGLLDEAFATYKEGLTTFP 240
>gi|443323624|ref|ZP_21052628.1| hypothetical protein GLO73106DRAFT_00001250 [Gloeocapsa sp. PCC
73106]
gi|442786606|gb|ELR96335.1| hypothetical protein GLO73106DRAFT_00001250 [Gloeocapsa sp. PCC
73106]
Length = 248
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 106 SVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKE 165
SV ++S+ L +++D S+ +E +LE+EP N ALK ++ + +G
Sbjct: 26 SVVTQATQQSSDGLNQQKDL----SQRAMGYELVLEREPDNQTALKGLLDIRLSQGDLSA 81
Query: 166 ALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ + L + P+ E+ +L A + +G AK++++ IL + + AL +
Sbjct: 82 VVGPLSNLARLNPDRSEYGILLAQTKQQLGDNEGAKQVYESILAQNAGDVLALQGM 137
>gi|440682263|ref|YP_007157058.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
gi|428679382|gb|AFZ58148.1| Tetratricopeptide TPR_1 repeat-containing protein [Anabaena
cylindrica PCC 7122]
Length = 333
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 18/109 (16%)
Query: 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR------RGRNKEA-----LEFVKR 172
DA+ G +E +L+KEP N ALK +++ ++ +G K A ++ +++
Sbjct: 91 DAVRG-------YELVLQKEPENQTALKGLVEARLQLLSQKGKGEVKPADIQAVIDPLEK 143
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
L + P + E+ +L A + +G A + ++ IL +P L+AL +
Sbjct: 144 LAKLNPQQSEYGVLLAQAKQQIGDKEGAAQSYRSILATKPGDLKALQGM 192
>gi|414585831|tpg|DAA36402.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
Length = 1065
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE----VEWK--LLQAL 189
FEK+LE P N E+LK + + + G ++A+E K++ I+P + VE L+++
Sbjct: 375 FEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFVELGELLVESD 434
Query: 190 CYELMGKLSTAKRLFKDILKERPLLL 215
M L TA+ L K + P+ L
Sbjct: 435 WAAAMEYLKTARNLLKKAGEAVPVEL 460
>gi|425452433|ref|ZP_18832250.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
7941]
gi|389765754|emb|CCI08427.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
7941]
Length = 272
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+E N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLERELDNQTALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRSLLASHPQNLRALTGL 146
>gi|340506707|gb|EGR32790.1| hypothetical protein IMG5_070720 [Ichthyophthirius multifiliis]
Length = 1033
Score = 37.7 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 116 SENLKEKRDALMGKSEVEEMFEKLLEKE---PRNVEALKVVMQGN--MRRGR-NKEALEF 169
+ENL++++D +S KL+ + N++ + +++G M++G N+ L+F
Sbjct: 2 TENLRQEKDIFQYQSPTNYRQRKLIFSQIYKSENIKQNQFIIKGKELMKQGEFNQALLQF 61
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKER 211
+ LI+ +P E + LQA+CY + K + LF D+++++
Sbjct: 62 QEALIN-DPQLQEAQYLQAICYLQLEKFQKSIDLFSDLIEKQ 102
>gi|119628676|gb|EAX08271.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_f
[Homo sapiens]
Length = 260
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 53 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDT 112
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 113 YKDTHRKFPENVECLRFLVRLCTDLG 138
>gi|425437534|ref|ZP_18817949.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9432]
gi|389677479|emb|CCH93590.1| conserved exported hypothetical protein [Microcystis aeruginosa PCC
9432]
Length = 272
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 48/86 (55%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
++ +LE+E N AL+ ++ +++G K+A+E +++L + P + ++ LL A + +
Sbjct: 61 YQMVLERELDNQTALRGLLDIRLQQGDLKQAIEPLEKLAQLNPQQSDYLLLLAEAKQQIE 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
+ A ++ +L P LRAL L
Sbjct: 121 DYAGATASYRSLLASHPQNLRALTGL 146
>gi|146186287|ref|XP_001033322.2| TPR Domain containing protein [Tetrahymena thermophila]
gi|146143010|gb|EAR85659.2| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 899
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 139 LLEKEPRNVEALKVVMQGN--MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196
+L +EPRN AL +GN M++G ++A+ ++++ I+P+ V L +A C+ + G
Sbjct: 235 ILSREPRNTFAL--FSRGNALMQKGEIEKAIIDFEKVLSIDPDNVNAALARASCWNIKGD 292
Query: 197 LSTAKRLFKDILK 209
A ++D L+
Sbjct: 293 YVKAIDQYEDALE 305
>gi|356534892|ref|XP_003535985.1| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Glycine max]
Length = 802
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 127 MGKSEVE-EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E+F+K ++ +P +V+AL + M GR + A E R++ + PN +L
Sbjct: 391 MGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQL 450
Query: 186 LQALCYELMGKLSTAKRLFKDILK 209
+A+ G+ AKR K+ LK
Sbjct: 451 NKAVSLLGAGETEEAKRALKEALK 474
>gi|282908151|ref|ZP_06315982.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus WW2703/97]
gi|282327816|gb|EFB58098.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus WW2703/97]
Length = 420
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 60 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 115
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +LKE + AL
Sbjct: 116 HRVVRNLLAMCYLYLGEYDTAKALYEALLKEDSTDIYAL 154
>gi|189236217|ref|XP_971516.2| PREDICTED: similar to AT30101p [Tribolium castaneum]
Length = 913
Score = 37.7 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRR-GRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E M+EK E P + E L V MR+ GR++EA + + +D++P++
Sbjct: 815 EASVMYEKAAELRPHDYE-LAVAAATAMRQAGRHQEAERWYRTAVDLKPSDARSHTNLGA 873
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227
L GK S A +K+ L+ +P + L +L + S+
Sbjct: 874 ILHLNGKYSEAASSYKEALRLQPDDITTLTNLHKLHSV 911
>gi|32468850|emb|CAE01485.1| putative TRP domain protein [Staphylococcus aureus]
Length = 398
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 38 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 93
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +LKE + AL
Sbjct: 94 HRVVRNLLAMCYLYLGEYDTAKALYEALLKEDSTDIYAL 132
>gi|414585833|tpg|DAA36404.1| TPA: hypothetical protein ZEAMMB73_637393 [Zea mays]
Length = 892
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE----VEWK--LLQAL 189
FEK+LE P N E+LK + + + G ++A+E K++ I+P + VE L+++
Sbjct: 202 FEKVLEVHPENCESLKAIGHIHAKSGETEKAIETFKKVTRIDPKDHQAFVELGELLVESD 261
Query: 190 CYELMGKLSTAKRLFKDILKERPLLL 215
M L TA+ L K + P+ L
Sbjct: 262 WAAAMEYLKTARNLLKKAGEAVPVEL 287
>gi|221057706|ref|XP_002261361.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247366|emb|CAQ40766.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 281
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRG-RNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
F+ +L EP ++ L + GN+ R N AL + + ++ IEPN E L A CY+ +
Sbjct: 187 FKIILSSEPNHIPTLFSL--GNLYRYIDNHIALSYFEAILKIEPNNTEVLSLIASCYDNL 244
Query: 195 GKLSTA 200
GKL+ A
Sbjct: 245 GKLNEA 250
>gi|357436955|ref|XP_003588753.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477801|gb|AES59004.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 600
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL 213
R G KEA EFV+++ EPN++ W+ + C+ G+L + + K+++K P+
Sbjct: 377 RGGFVKEAFEFVQKM-PFEPNQIIWRTIITACHA-TGELKLGESISKELIKSEPM 429
>gi|20090471|ref|NP_616546.1| hypothetical protein MA1613 [Methanosarcina acetivorans C2A]
gi|19915489|gb|AAM05026.1| TPR-domain containing protein [Methanosarcina acetivorans C2A]
Length = 1885
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
+E E F+++L +P N EAL + ++G KEALE +R++ P + L
Sbjct: 1044 AEAESGFKEVLALDPANTEALAHLSTACFKKGHYKEALEIFERVLSQNPARKTILFRKGL 1103
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ GK A F +LK +P AL G
Sbjct: 1104 ALKAFGKNLEALEAFDLVLKLKPDCTYALDQKG 1136
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEWKLLQAL 189
+E F+ E E RNV + ++ G + G ALE ++++ +PNE+ + + +
Sbjct: 308 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 367
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALH 219
C + G +S ++ F + KE ++ R H
Sbjct: 368 CSHV-GMISEGQKHFNSMYKEHGIVPRMEH 396
>gi|328720964|ref|XP_001942864.2| PREDICTED: intraflagellar transport protein 88 homolog
[Acyrthosiphon pisum]
Length = 733
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E L + + ++A+++ ++ ++P E +W +L CY G A +
Sbjct: 485 PSNLEVLDWLGAYFVEMKVPEKAVDYFEQASLMQPAEPKWYMLIGSCYRRAGHFQLALQT 544
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD+L P LL+R DLG
Sbjct: 545 YKDVLNRFPDNTECLKLLIRICTDLG 570
>gi|328947737|ref|YP_004365074.1| hypothetical protein Tresu_0849 [Treponema succinifaciens DSM 2489]
gi|328448061|gb|AEB13777.1| Tetratricopeptide TPR_2 repeat-containing protein [Treponema
succinifaciens DSM 2489]
Length = 887
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Query: 126 LMGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWK 184
LMGK + F +++E+ P +V A + + +NK+A+ R + I+PN
Sbjct: 122 LMGKYDDALNCFNRVVEENPEDVLAFNHIGSIYALKNQNKDAVSSYLRGLKIDPNHPILH 181
Query: 185 LLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
L A Y+ +G+ A+ ++ LK +P L A+ +
Sbjct: 182 LNLAKSYDALGEFEKAQAEYEAALKTKPGWLEAIENYA 219
>gi|307174515|gb|EFN64974.1| Intraflagellar transport protein 88-like protein [Camponotus
floridanus]
Length = 779
Score = 37.7 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 117 ENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176
+ L E D++ K + + + P N E + + + ++AL + ++ +++
Sbjct: 558 QKLGELYDSIGDKQQAFQFYNDSHRFYPANFEVIDWIGSYFISMQVAEKALTYFEKAVEL 617
Query: 177 EPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDLG 222
P+E W+LL A C G+ A ++DI + P L+R D+G
Sbjct: 618 APDEPRWRLLVAACLRRTGQFHKALMEYQDIHNKFPDNIECLKFLIRLCSDMG 670
>gi|257059198|ref|YP_003137086.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
gi|256589364|gb|ACV00251.1| peptidase S1 and S6 chymotrypsin/Hap [Cyanothece sp. PCC 8802]
Length = 810
Score = 37.7 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 127 MGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW-- 183
MGK +E E +F +++E +P +A + +G+ EA+ ++ I + PN+ +
Sbjct: 42 MGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAAYQKAIQLNPNDADAYN 101
Query: 184 KLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
L AL Y+ GKL A ++ ++ P +A ++LG +S
Sbjct: 102 NLGNALYYQ--GKLEEAIAAYQKAIQLNPNFAQAYNNLGNALS 142
>gi|427734317|ref|YP_007053861.1| hypothetical protein Riv7116_0726 [Rivularia sp. PCC 7116]
gi|427369358|gb|AFY53314.1| hypothetical protein Riv7116_0726 [Rivularia sp. PCC 7116]
Length = 798
Score = 37.7 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 133 EEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYE 192
E ++ L+E +P ++ + +++ +R R + L +K+LI PN + AL +
Sbjct: 613 EALYNYLVEVDPSSIRLQQRLLESIAQRNRGEARLR-MKQLIASAPNNANSQQRVALLAK 671
Query: 193 LMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+G L A + +++ILK+ P + AL LG
Sbjct: 672 AVGDLDMASKAYENILKQEPDDIDALAALG 701
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEWKLLQAL 189
+E F+ E E RNV + ++ G + G ALE ++++ +PNE+ + + +
Sbjct: 313 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 372
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALH 219
C + G +S ++ F + KE ++ R H
Sbjct: 373 CSHV-GMISEGQKHFNSMYKEHGIVPRMEH 401
>gi|331700251|ref|YP_004336490.1| hypothetical protein Psed_6549 [Pseudonocardia dioxanivorans
CB1190]
gi|326954940|gb|AEA28637.1| Tetratricopeptide TPR_2 repeat-containing protein [Pseudonocardia
dioxanivorans CB1190]
Length = 345
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 139 LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198
L EP A V+Q R GR +A + +R++ + P+ E LL A +G L+
Sbjct: 106 LAPDEPYAGIAYSRVLQ---RAGRPADAAQAARRVVTLAPSSPEAHLLLADVSGDLGDLA 162
Query: 199 TAKRLFKDILKERPLLLRALHDLG 222
TA+R +++ L+ P A HDL
Sbjct: 163 TARRAYEETLRLDPEHAAARHDLA 186
>gi|406892382|gb|EKD37746.1| hypothetical protein ACD_75C01012G0001 [uncultured bacterium]
Length = 759
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 126 LMGKSEVE-EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN 179
LMGKSE + +LL +P+++ AL + +G++ EA+E KR+++I+P+
Sbjct: 584 LMGKSEESVAQYNELLTNQPKSIAALMGLATAYESQGKSAEAMEKYKRILEIQPD 638
>gi|345308721|ref|XP_001521187.2| PREDICTED: dnaJ homolog subfamily C member 7-like, partial
[Ornithorhynchus anatinus]
Length = 541
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Query: 104 RPSVALPGKMRASENLKEKRDALMGKSEVEEMFE---KLLEKEPRNVEALKVVMQGNMRR 160
RP + P +R +E KE+ +A + E F + ++ P+N M
Sbjct: 63 RPKSSSPLCLREAEAFKEQGNAFYANKDYHEAFNCYTRAIDMCPKNASYYGNRAATLMML 122
Query: 161 GRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHD 220
GR +EAL ++ + ++ + V L + C+ +G A+R F+ +L P +A +
Sbjct: 123 GRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAARRSFQKVLDLDPRNAQAQQE 182
Query: 221 L 221
L
Sbjct: 183 L 183
>gi|329964573|ref|ZP_08301627.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
gi|328524973|gb|EGF52025.1| tetratricopeptide repeat protein [Bacteroides fluxus YIT 12057]
Length = 597
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 82 KEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLE 141
KEKA L G V F S L P L N +E D ++G + ++ E++ +
Sbjct: 136 KEKATALLEGMVT---RFSSKLDPLYNL----LEIYNRQEAYDKVIGI--LNKLEERMGK 186
Query: 142 KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201
E ++E ++ +Q + +K A ++ L+ P + ++++ Y GK A
Sbjct: 187 SEQLSMEKFRIYLQ----KKDDKSAFREIESLVAEYPMDTRYQIVLGDVYMQNGKKEEAY 242
Query: 202 RLFKDILKERPLLLRALHDLGRYVSMTLQ 230
RL++ +LKE P A++ + Y T Q
Sbjct: 243 RLYQKVLKEEPENALAMYSMASYYEATGQ 271
>gi|322419884|ref|YP_004199107.1| hypothetical protein GM18_2373 [Geobacter sp. M18]
gi|320126271|gb|ADW13831.1| Tetratricopeptide TPR_1 repeat-containing protein [Geobacter sp.
M18]
Length = 263
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%)
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197
K LE P++V+ L + G++K+AL +++ +++P + + + L Y M +
Sbjct: 64 KGLELAPQDVDGLTALGDVYFESGKHKDALACYRKMTELQPKDCDGYVSMGLVYNAMERT 123
Query: 198 STAKRLFKDILKERPLLLRALHDLG 222
A + F+ L+ P + AL+ +G
Sbjct: 124 DDALKAFEMALELDPANVFALNAMG 148
>gi|298527930|ref|ZP_07015334.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511582|gb|EFI35484.1| TPR repeat-containing protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 186
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 39/81 (48%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
EE + K LE+ P N EA+ + M++ +N +AL++ + + I+P + A
Sbjct: 87 AEESYRKALERSPDNPEAMNNLAYVLMKQDKNDDALDWSAKAVKIQPENPAFLNTHARAC 146
Query: 192 ELMGKLSTAKRLFKDILKERP 212
G AKR+F L + P
Sbjct: 147 LKTGNPDKAKRIFTRALSQLP 167
>gi|40063713|gb|AAR38494.1| TPR repeat protein [uncultured marine bacterium 583]
Length = 1120
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 127 MGKSEVEEMFEKLLEKEPRNV------------EALKVVMQGNMRRGRNKEALEFVKRLI 174
+ + + ++ EK L K+P+NV E + V+ G G+ +EAL+ V+ LI
Sbjct: 548 LDSNSLNQLVEKGL-KDPQNVKVNKKNQLGPSQEQINSVI-GLYSNGQIQEALDTVETLI 605
Query: 175 DIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
PNE + + CY +G+L TA + ++ L +P ++LG
Sbjct: 606 KDYPNEPLFYNISGACYAGLGQLDTAIKRYEKALVIKPDYAEVHNNLG 653
>gi|410478317|ref|YP_006765954.1| TPR-domain containing protein [Leptospirillum ferriphilum ML-04]
gi|406773569|gb|AFS52994.1| putative TPR-domain containing protein [Leptospirillum ferriphilum
ML-04]
Length = 1076
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
S ++ +L+ +PRN E + Q + GR KEA + +K + I+P +
Sbjct: 121 SPAKDEIAAILKIDPRNAEGYALAGQRMLGLGREKEADQDLKHALSIKPGYARALVALGD 180
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
G+ A+ +K L+ P + RAL LG
Sbjct: 181 LKRKQGQPKEARSYYKQALQANPSIGRALTGLG 213
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEWKLLQAL 189
+E F+ E E RNV + ++ G + G ALE ++++ +PNE+ + + +
Sbjct: 176 IEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSA 235
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALH 219
C + G +S ++ F + KE ++ R H
Sbjct: 236 CSHV-GMISEGQKHFNSMYKEHGIVPRMEH 264
>gi|49483020|ref|YP_040244.1| hypothetical protein SAR0817 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424883|ref|ZP_05601310.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427551|ref|ZP_05603950.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430182|ref|ZP_05606566.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257432883|ref|ZP_05609243.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257435787|ref|ZP_05611835.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
M876]
gi|282903393|ref|ZP_06311284.1| TPR domain protein [Staphylococcus aureus subsp. aureus C160]
gi|282905173|ref|ZP_06313030.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282910409|ref|ZP_06318213.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282913604|ref|ZP_06321393.1| TPR domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282918556|ref|ZP_06326293.1| hypothetical protein SASG_02111 [Staphylococcus aureus subsp.
aureus C427]
gi|282923522|ref|ZP_06331202.1| hypothetical protein SARG_00842 [Staphylococcus aureus subsp.
aureus C101]
gi|283957595|ref|ZP_06375048.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500648|ref|ZP_06666499.1| hypothetical protein SCAG_01178 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293509596|ref|ZP_06668307.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus M809]
gi|293524182|ref|ZP_06670869.1| TPR domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|295427341|ref|ZP_06819976.1| hypothetical protein SIAG_01877 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590304|ref|ZP_06948943.1| TPR domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|384868304|ref|YP_005748500.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|415683590|ref|ZP_11448806.1| hypothetical protein CGSSa00_11665 [Staphylococcus aureus subsp.
aureus CGS00]
gi|417887185|ref|ZP_12531318.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21195]
gi|418565778|ref|ZP_13130173.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21264]
gi|418581477|ref|ZP_13145558.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418596852|ref|ZP_13160397.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21342]
gi|418601696|ref|ZP_13165112.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21345]
gi|418891405|ref|ZP_13445522.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418897180|ref|ZP_13451253.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900150|ref|ZP_13454209.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418908556|ref|ZP_13462564.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|418916628|ref|ZP_13470589.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418922432|ref|ZP_13476349.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418981666|ref|ZP_13529381.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985304|ref|ZP_13532993.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|49241149|emb|CAG39827.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257272453|gb|EEV04576.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275744|gb|EEV07217.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279379|gb|EEV09980.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257282298|gb|EEV12433.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257284978|gb|EEV15097.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
M876]
gi|282314390|gb|EFB44780.1| hypothetical protein SARG_00842 [Staphylococcus aureus subsp.
aureus C101]
gi|282317690|gb|EFB48062.1| hypothetical protein SASG_02111 [Staphylococcus aureus subsp.
aureus C427]
gi|282322636|gb|EFB52958.1| TPR domain protein [Staphylococcus aureus subsp. aureus M899]
gi|282325801|gb|EFB56109.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus WBG10049]
gi|282331580|gb|EFB61092.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus Btn1260]
gi|282596348|gb|EFC01309.1| TPR domain protein [Staphylococcus aureus subsp. aureus C160]
gi|283791046|gb|EFC29861.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921145|gb|EFD98206.1| TPR domain protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095653|gb|EFE25914.1| hypothetical protein SCAG_01178 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291467693|gb|EFF10208.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus M809]
gi|295128729|gb|EFG58360.1| hypothetical protein SIAG_01877 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297576603|gb|EFH95318.1| TPR domain protein [Staphylococcus aureus subsp. aureus MN8]
gi|312438809|gb|ADQ77880.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus TCH60]
gi|315194382|gb|EFU24774.1| hypothetical protein CGSSa00_11665 [Staphylococcus aureus subsp.
aureus CGS00]
gi|341858238|gb|EGS99035.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21195]
gi|371972689|gb|EHO90063.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21264]
gi|374396570|gb|EHQ67804.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21342]
gi|374397507|gb|EHQ68716.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21345]
gi|377705232|gb|EHT29540.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707146|gb|EHT31440.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707486|gb|EHT31779.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711704|gb|EHT35933.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377732362|gb|EHT56413.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377735755|gb|EHT59785.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377751133|gb|EHT75067.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377755895|gb|EHT79793.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG149]
gi|377761959|gb|EHT85828.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIGC341D]
Length = 479
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +LKE + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLKEDSTDIYAL 213
>gi|225850059|ref|YP_002730293.1| hypothetical protein PERMA_0503 [Persephonella marina EX-H1]
gi|225646356|gb|ACO04542.1| tetratricopeptide repeat domain protein [Persephonella marina
EX-H1]
Length = 559
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 10/124 (8%)
Query: 76 KIMKVLKEKAVIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGK------ 129
KI K+ +K ++ + I+L F +N ++ K E L + L+G+
Sbjct: 155 KIAKISPKKPRVYYTLARIYL--FQNNKEEAIKHLKKALEIEPLYQPAYVLLGELYLQDR 212
Query: 130 --SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187
E E+++ K+LEK+P ++EAL + Q ++ + K+A E + R++ I+P+ + L +
Sbjct: 213 KFKEAEKVYLKVLEKDPNDLEALNRLFQVYVQADQFKKAEEIINRIVKIDPSNKDALLKK 272
Query: 188 ALCY 191
L Y
Sbjct: 273 FLLY 276
>gi|254506313|ref|ZP_05118456.1| type IV pilus biogenesis/stability protein PilW [Vibrio
parahaemolyticus 16]
gi|219550793|gb|EED27775.1| type IV pilus biogenesis/stability protein PilW [Vibrio
parahaemolyticus 16]
Length = 236
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202
E R + + QGNM + R E +++ +D PN +L A +E +G+ +A++
Sbjct: 35 EARIALGIGYLEQGNMVKAR-----ENLEKALDHSPNYYRAQLSMAHYFEKVGETQSAEK 89
Query: 203 LFKDILKERPLLLRALHDLGRYVS 226
++K LK+ P L++ G ++
Sbjct: 90 MYKTALKQHPRNGNVLNNFGTFLC 113
>gi|254417461|ref|ZP_05031201.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196175726|gb|EDX70750.1| tetratricopeptide repeat domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 374
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 36/77 (46%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+++ LE P N EA ++ GR +EA+ + +++ P+ V + CY G
Sbjct: 268 YDRALECMPENYEAWDNRGYALVKMGRYREAMASFDKALEVNPDHVNAVYNKGYCYAAQG 327
Query: 196 KLSTAKRLFKDILKERP 212
K++ A + +K P
Sbjct: 328 KVTLAVNYIEQAIKVNP 344
>gi|73667569|ref|YP_303584.1| hypothetical protein Mbar_A0011 [Methanosarcina barkeri str.
Fusaro]
gi|72394731|gb|AAZ69004.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 1138
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 20/114 (17%)
Query: 102 NLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG 161
N S AL GK A NL +A+ + KLL EP N+EAL+ +
Sbjct: 750 NSSNSDALLGKGLALSNLSRYDEAI-------SCYTKLLNSEPENLEALRSRAFALSKSN 802
Query: 162 RNKEALEFVKRLIDIEPNEVE-----WKLLQAL--------CYELMGKLSTAKR 202
++ +AL R+I ++P + LL+AL CYE M ++S R
Sbjct: 803 KSNDALADYDRIIKLQPENSQILAEKASLLEALGRYEETAACYERMLEISPNNR 856
>gi|333985873|ref|YP_004515083.1| hypothetical protein [Methylomonas methanica MC09]
gi|333809914|gb|AEG02584.1| Tetratricopeptide TPR_2 repeat-containing protein [Methylomonas
methanica MC09]
Length = 1147
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
KR AL + EE+ K ++ P N AL++++Q RG K A E + +L + +
Sbjct: 460 KRGAL---ASAEEITRKQVQASPNNTVALEMLIQVRALRGDWKGAAEALAKLEKLPGAQS 516
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ A L G +A + ++ +L+++P +AL DL
Sbjct: 517 TTRYWAARLASLQGNTDSAIKGYQALLQQQPSYTKALTDL 556
>gi|158521641|ref|YP_001529511.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3]
gi|158510467|gb|ABW67434.1| peptidase M48 Ste24p [Desulfococcus oleovorans Hxd3]
Length = 474
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%)
Query: 137 EKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196
EK+ EK P + AL + + + G ++AL ++R+ + E A+ E +G
Sbjct: 321 EKVAEKSPFHPHALTDLGKAHYFTGAYEKALSILERVPPTDFYNTERYFYTAMAAEKLGL 380
Query: 197 LSTAKRLFKDILKERPLLLRALHDLGR 223
+ L+K I+++ P L AL++LG+
Sbjct: 381 HDKSITLYKRIIQQEPRYLPALYELGK 407
>gi|83311255|ref|YP_421519.1| hypothetical protein amb2156 [Magnetospirillum magneticum AMB-1]
gi|82946096|dbj|BAE50960.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
Length = 1208
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+ + +++E +P N +AL Q GR ++AL F L++++ + +L A
Sbjct: 46 DAYRRIIELDPSNTDALLAAAQACRLAGRPRDALLFCLDLLEMDRQHMGCRLELAEALRQ 105
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
+G+ A + +L ERP ++ LGR ++
Sbjct: 106 IGQPDEAHAIIDILLMERPDSVQVWCGLGRLLN 138
>gi|269105137|ref|ZP_06157831.1| Flp pilus assembly protein TadD [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160587|gb|EEZ39086.1| Flp pilus assembly protein TadD [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 242
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204
NVE+L ++ G NKEAL K+ +EPN + + L A+ Y G + A+ F
Sbjct: 87 NNVESLIIMTNAFFDLGNNKEALNIAKKANVLEPNRGDIENLIAIIYASNGDIKNAREFF 146
>gi|288940335|ref|YP_003442575.1| CheR-type MCP methyltransferase [Allochromatium vinosum DSM 180]
gi|288895707|gb|ADC61543.1| MCP methyltransferase, CheR-type [Allochromatium vinosum DSM 180]
Length = 532
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%)
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197
++LE + N+EAL ++ + R+GR EA+ F++R I P A Y G+
Sbjct: 420 RVLEIDHWNLEALLLLGRSAQRQGRTTEAIGFLRRAIYHRPESWPAHFQLAEVYHATGQA 479
Query: 198 STAKRLFKDILKE 210
A+R ++ +L++
Sbjct: 480 QLAQREYRVVLRQ 492
>gi|397781376|ref|YP_006545849.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
gi|396939878|emb|CCJ37133.1| TPR repeat-containing protein [Methanoculleus bourgensis MS2]
Length = 1067
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
FEK+L+ +P + + + + N + GR +EA+ R++D EP +E +A +G
Sbjct: 853 FEKVLDADPMDTLTQRRLGEANEKAGRYEEAIAAYTRVLDREPANIETLHARASALIHLG 912
Query: 196 KLSTAKRLFKD---ILKERP--LLLRA--LHDLGRY 224
+ A + IL E P L +R L GRY
Sbjct: 913 RYGEAIKSIDKIIVILPENPAVLFMRGAVLEKAGRY 948
>gi|307352488|ref|YP_003893539.1| tetratricopeptide repeat-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307155721|gb|ADN35101.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
DSM 11571]
Length = 1098
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
K + ++ L+ EP NV L ++ GR E+L + RLI + P E + + +A
Sbjct: 808 KDDAVVLYVSALQLEPENVGYLLELVSILSDLGRYGESLSYYDRLISLVPGESGFVMSRA 867
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
L +G+ + F+ +L+++P AL ++G
Sbjct: 868 LALYTLGRYEDSVADFEKVLRKKPDDTDALINMG 901
>gi|427722160|ref|YP_007069437.1| glycosyl transferase family protein [Leptolyngbya sp. PCC 7376]
gi|427353880|gb|AFY36603.1| glycosyl transferase family 9 [Leptolyngbya sp. PCC 7376]
Length = 2322
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRR-----GRNKEALEFVKR 172
NL L + E+++K++E EP N+ A Q N+ R GR ++A+E +R
Sbjct: 1940 NLANSFHRLSDFEQARELYQKIVETEPGNLAA-----QYNLGRVLQDLGRYQDAIEAYER 1994
Query: 173 LIDIEPNEVEWKLLQALCYELMGKLS 198
+I I+PN+V+ L L G+ S
Sbjct: 1995 VITIDPNDVKSHHNLGLILLLRGEFS 2020
>gi|414079800|ref|YP_007001224.1| hypothetical protein ANA_C20752 [Anabaena sp. 90]
gi|413973079|gb|AFW97167.1| TPR repeat-containing protein [Anabaena sp. 90]
Length = 302
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 129 KSEVEEM---FEKLLEKEPRNVEALKVVM-----------QGNMRRGRNKEALEFVKRLI 174
KS++E+ +E +L+K+ N ALK ++ QG ++ + +E +++L
Sbjct: 56 KSKLEDQVRGYELVLQKDAENQTALKGLLQARLGLLSQKSQGEVKPADIQAVIEPLEKLA 115
Query: 175 DIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ P + E+ +L A + +G A + ++ IL ++P L+AL +
Sbjct: 116 KLNPQQSEYGVLLAQAKQQIGDKEGAAQTYRSILTKKPGDLKALQGM 162
>gi|120612096|ref|YP_971774.1| type 12 methyltransferase [Acidovorax citrulli AAC00-1]
gi|120590560|gb|ABM34000.1| Methyltransferase type 12 [Acidovorax citrulli AAC00-1]
Length = 436
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 45/82 (54%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E+ EKL +EPRN+ L V+ R G + A+ ++R +++ P +V+ + L A
Sbjct: 97 EAVELAEKLAAREPRNLVVLAGVVDIAHRAGHLEMAVRHLRRGLEMVPGDVQLRRLLARD 156
Query: 191 YELMGKLSTAKRLFKDILKERP 212
+G+ + + +++ ++ E P
Sbjct: 157 LSDLGQHAESLQVWGALIDENP 178
>gi|427734860|ref|YP_007054404.1| Tfp pilus assembly protein PilF [Rivularia sp. PCC 7116]
gi|427369901|gb|AFY53857.1| Tfp pilus assembly protein PilF [Rivularia sp. PCC 7116]
Length = 287
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMR-----RGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
+E++LE+EP N AL+ +++ ++ +G K + +++L + P E + +L A
Sbjct: 64 YEQVLEREPENQTALQGLLEARLQLLRLGQGDIKGVINPLEKLSKLNPEETRYAVLLAQA 123
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ G A + ++ +L+ +P L AL +
Sbjct: 124 KQQTGDKEGAAQAYRTVLETKPGDLPALQGM 154
>gi|332840996|ref|XP_003314116.1| PREDICTED: intraflagellar transport protein 88 homolog [Pan
troglodytes]
Length = 805
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+++ +R I+P +V+W+L+ A C+ G A
Sbjct: 598 PCNIEVIEWLGAYYIDTQFWEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNSQKALDT 657
Query: 204 FKDILKERP-------LLLRALHDLG 222
+KD ++ P L+R DLG
Sbjct: 658 YKDTHRKFPENVECLRFLVRLCTDLG 683
>gi|296131665|ref|YP_003638912.1| hypothetical protein TherJR_0118 [Thermincola potens JR]
gi|296030243|gb|ADG81011.1| TPR repeat-containing protein [Thermincola potens JR]
Length = 212
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 158 MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ +G+ E ++ +++ +EP++ + LL+A YE MG + AK ++++LK P
Sbjct: 145 LAQGKYGEVIKVADKVLKLEPDKADLHLLKARAYEKMGDKAKAKEQYQEVLKFVP 199
>gi|443327906|ref|ZP_21056513.1| hypothetical protein Xen7305DRAFT_00017070 [Xenococcus sp. PCC
7305]
gi|442792517|gb|ELS01997.1| hypothetical protein Xen7305DRAFT_00017070 [Xenococcus sp. PCC
7305]
Length = 133
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 86 VIFLAGSVIFLGSFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPR 145
V+F + F+GS G+ + S+ A+ + E D L E +EK+L +EP
Sbjct: 12 VVF---GLAFVGSTGAVIIGSLLRRDPAVANNPVAETADPLAQLQAQAEGYEKVLAREPN 68
Query: 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
N+ AL ++Q ++ G + A+ + +L+ I P + L+ E + ST
Sbjct: 69 NLNALSALVQIRLQTGDLQGAIAPLDKLVAIYPEDPNLVALRTQIQEELANKST 122
>gi|406982126|gb|EKE03486.1| SLEI family protein [uncultured bacterium]
Length = 266
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%)
Query: 172 RLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ I I+PN +E + A+ +EL ++ + ++++ I++ERP + A ++LG
Sbjct: 124 KAIKIDPNYIEAQFQLAVVHELSNEIDMSMKIYQKIIEERPSYIAAYNNLG 174
>gi|440747552|ref|ZP_20926809.1| TPR repeat protein [Mariniradius saccharolyticus AK6]
gi|436484022|gb|ELP40042.1| TPR repeat protein [Mariniradius saccharolyticus AK6]
Length = 398
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 12/118 (10%)
Query: 104 RPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN 163
+P AL K R + L+ ++ +E E F+K+LE +P + EALK + R
Sbjct: 249 QPDFALSYKQRGYQRLRAEK-----WTEALEDFDKVLEIQPDDAEALKYKAYVLQKLKRA 303
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221
+ALE R I + P + A Y G + K+ + D + L L DL
Sbjct: 304 DQALELYNRAIGLNP-------MDAQAYFSKGNILYQKQQYLDAIAAYTLALYYQPDL 354
>gi|256004184|ref|ZP_05429167.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
gi|281419440|ref|ZP_06250454.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
gi|385777968|ref|YP_005687133.1| hypothetical protein Clo1313_0600 [Clostridium thermocellum DSM
1313]
gi|419722004|ref|ZP_14249156.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum AD2]
gi|419726971|ref|ZP_14253981.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum YS]
gi|255991774|gb|EEU01873.1| TPR repeat-containing protein [Clostridium thermocellum DSM 2360]
gi|281406846|gb|EFB37110.1| TPR repeat-containing protein [Clostridium thermocellum JW20]
gi|316939648|gb|ADU73682.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum DSM 1313]
gi|380769557|gb|EIC03467.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum YS]
gi|380782043|gb|EIC11689.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum AD2]
Length = 591
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 12/170 (7%)
Query: 71 LSPENKIMKVLKEKAVIFLAGSVIFLGSFGS---NLRPSVALPGKMRASENL--KEKRDA 125
LSPEN I+ V +A + S+ G + NL ++ LP K + ++ K A
Sbjct: 374 LSPENIILCV---QAYTNIGSSLSEKGMYEEALKNLDKALELPSKNAKAISIAYSNKAYA 430
Query: 126 LMGKSEVEEMFE---KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
L+G ++E+ E K +E +P NV MR R KEALE I + +
Sbjct: 431 LIGLEKLEDALECANKAIEADPSNVMGYSNKSSVLMRLSRYKEALECCDEAIKLNIADYA 490
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232
+ L E GKL A F L+ P A ++ R VS L I+
Sbjct: 491 VYNNKGLALESQGKLGKALEAFNKSLELNPDYKNAQDNIQR-VSTKLTIR 539
>gi|312621087|ref|YP_003993815.1| Flp pilus assembly protein TadD, contains TPR repeat
[Photobacterium damselae subsp. damselae]
gi|311872808|emb|CBX86899.1| Flp pilus assembly protein TadD, contains TPR repeat
[Photobacterium damselae subsp. damselae]
Length = 242
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204
NVE+L ++ G NKEAL K+ +EPN + + L A+ Y G + A+ F
Sbjct: 87 NNVESLIIMANAFFDLGNNKEALNIAKKANVLEPNRGDIENLIAIIYASNGDIKNAREFF 146
>gi|294508725|ref|YP_003572784.1| hypothetical protein SRM_02912 [Salinibacter ruber M8]
gi|294345055|emb|CBH25833.1| Conserved hypothetical protein containing TPR domain [Salinibacter
ruber M8]
Length = 554
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 134 EMFEKLLEKEPRNVEAL--KVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
E+ ++L+E P +A + ++ N+ GR +EALE ++ +D+ P + E + +
Sbjct: 143 EVIDRLIELHPYTSDAWMRRGILLNNL--GRPEEALEAYEQALDVNPTDTETLINLGITL 200
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233
+ +G++ A + + L PL AL +LG + Q+++
Sbjct: 201 DSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEA 242
>gi|83814061|ref|YP_446792.1| hypothetical protein SRU_2700 [Salinibacter ruber DSM 13855]
gi|83755455|gb|ABC43568.1| TPR repeat protein [Salinibacter ruber DSM 13855]
Length = 554
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 134 EMFEKLLEKEPRNVEAL--KVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
E+ ++L+E P +A + ++ N+ GR +EALE ++ +D+ P + E + +
Sbjct: 143 EVIDRLIELHPYTSDAWMRRGILLNNL--GRPEEALEAYEQALDVNPTDTETLINLGITL 200
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233
+ +G++ A + + L PL AL +LG + Q+++
Sbjct: 201 DSLGRVDEALEAYDEALSINPLHGEALFNLGVTLERDEQLEA 242
>gi|378825729|ref|YP_005188461.1| putative adenylate cyclase [Sinorhizobium fredii HH103]
gi|365178781|emb|CCE95636.1| putative adenylate cyclase [Sinorhizobium fredii HH103]
Length = 580
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ--- 187
E +E F EP N +AL + + GR EA+E ++R + + P+ W Q
Sbjct: 434 ESDEEFAAAFTLEPNNADALAICSELAAFAGRPSEAIELIQRALRLNPHPAGWYYWQLGL 493
Query: 188 ---ALC-YELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
A C YE K+ + +++ R +L +L LGR
Sbjct: 494 AHYAACQYEEAVKILRMEAIYRS--PSRRILAASLAQLGR 531
>gi|329765153|ref|ZP_08256735.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138356|gb|EGG42610.1| TPR repeat protein [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 600
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
FEK+LE P N+EA ++ Q M EAL +++++I PN ++ + + E +G
Sbjct: 260 FEKVLEISPNNIEAHLLLGQIKMDLNNTDEALAHFEKVLEISPNHMDGLNSKIILLEKLG 319
Query: 196 KLSTA 200
K+ A
Sbjct: 320 KVDEA 324
>gi|434389719|ref|YP_007100330.1| hypothetical protein Cha6605_5957 [Chamaesiphon minutus PCC 6605]
gi|428020709|gb|AFY96803.1| hypothetical protein Cha6605_5957 [Chamaesiphon minutus PCC 6605]
Length = 283
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ ++L+KEP N ALK ++ ++ G K +L ++++ + P + +L A + +G
Sbjct: 61 YTQVLQKEPENQVALKGLLDARLQLGDIKGSLAPLEKIAALNPQTPNYTVLVAQTKQYLG 120
Query: 196 KLSTAKRLFKDILKERPLLLRALHDL 221
A ++ +L +P + AL L
Sbjct: 121 DREGATASYRTVLALQPQNINALQGL 146
>gi|167041856|gb|ABZ06596.1| putative TPR domain protein [uncultured marine microorganism
HF4000_133G03]
Length = 452
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 11/108 (10%)
Query: 108 ALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN--KE 165
A P + A NL + ++ FEK+++ +P++V+AL + GN+ + N ++
Sbjct: 70 AQPNNVDAHNNLGVVFKEFEEFQKAKDCFEKVIQIQPKHVDALNNL--GNVFKQLNEPQK 127
Query: 166 ALEFVKRLIDIEPNEVEW-KLLQALC------YELMGKLSTAKRLFKD 206
A+ + ++ I+IEP+ + + L +C EL +S A+ FKD
Sbjct: 128 AINYYQKAIEIEPSYINAHQNLMDVCEKTNHITELKNAVSNARTFFKD 175
>gi|357144204|ref|XP_003573209.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog
[Brachypodium distachyon]
Length = 1064
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE----VEWK--LLQAL 189
FEK+LE P N E+LK + G N +A+E K++ I+P + VE L+++
Sbjct: 375 FEKVLEVHPENCESLKAIGNIYANLGENDKAIETFKKVTRIDPKDHQAFVELGELLVESD 434
Query: 190 CYELMGKLSTAKRLFKDILKERPLLL 215
M L TA+ L K ++ P+ L
Sbjct: 435 WAAAMEYLKTARTLLKKAGEKTPVEL 460
>gi|308274171|emb|CBX30770.1| hypothetical protein N47_E42820 [uncultured Desulfobacterium sp.]
Length = 765
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 45/84 (53%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
K + E F++ ++K P++++AL + + + E ++ ++++ I P E +L+
Sbjct: 291 KEKAEAAFKETVDKNPQDIKALSRLASFYIDDKKYDEGMKETEKILKINPKSQEGLVLKG 350
Query: 189 LCYELMGKLSTAKRLFKDILKERP 212
Y + K + A+ LF+ LK+ P
Sbjct: 351 RLYLVRNKFTEAQSLFQSFLKDNP 374
>gi|444914159|ref|ZP_21234304.1| hypothetical protein D187_06474 [Cystobacter fuscus DSM 2262]
gi|444715093|gb|ELW55966.1| hypothetical protein D187_06474 [Cystobacter fuscus DSM 2262]
Length = 310
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 84 KAVIFLAGSVIFLGSFGSNL------------RPSVALPGKMRASENLKEKRDALMGKSE 131
K ++ G V+F G G L PG M +++ +++ A SE
Sbjct: 118 KGALWGGGIVLFFGVLGYTLVSEQHPRGENEAATGRVPPGAMGSAD--AQQQGAPQMDSE 175
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
+++ +EKL +K P ++E+ +V +R +EA R + ++P VE ++ Q +
Sbjct: 176 LQQAWEKL-QKNPADLESASIVSHELIRNQMYEEAERVTLRALAVDPFNVELRVHQGVLL 234
Query: 192 ELMGKLSTAKR 202
+ G S A+R
Sbjct: 235 AVRGDESGARR 245
>gi|327269026|ref|XP_003219296.1| PREDICTED: intraflagellar transport protein 88 homolog [Anolis
carolinensis]
Length = 820
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P A L E D KS+ + + + P N+E ++ + + ++A+
Sbjct: 583 VPTDSHALAKLGELYDNEGDKSQAFQYYFESYRYFPSNIEVIEWLGAYYIDTQFCEKAIH 642
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A CY G A +K I ++ P L+R D+
Sbjct: 643 YFERAALIQPTQVKWQLMVASCYRRSGNYQKALDTYKMIHRKFPDNAECLRFLVRLCTDM 702
Query: 222 G 222
G
Sbjct: 703 G 703
>gi|15606285|ref|NP_213664.1| hypothetical protein aq_972 [Aquifex aeolicus VF5]
gi|2983491|gb|AAC07070.1| hypothetical protein aq_972 [Aquifex aeolicus VF5]
Length = 425
Score = 37.4 bits (85), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
K E + FE+ ++ P N A+ + G+ K ALE+ KR+ D++P + LQ
Sbjct: 288 KDEALKKFEEAIKLFPNNQIAMSYASAIYLEHGKYKRALEYAKRVSDLDPYLLWGWYLQG 347
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223
+ Y + K + R + K P + LGR
Sbjct: 348 IAYFKLKKYKESIRALNEAKKRIPSYAGIYYYLGR 382
>gi|148237608|ref|NP_001088513.1| interferon-induced protein with tetratricopeptide repeats 1
[Xenopus laevis]
gi|54311460|gb|AAH84851.1| LOC495383 protein [Xenopus laevis]
Length = 462
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Query: 132 VEEMFEKLLEKEPRNVE---ALKVVM-----QGN-MRRGRNKEALEFVKRLIDIEPNEVE 182
+E FEK LE +P N E VM Q N N E LE +KR + + N+
Sbjct: 158 AKEWFEKALELDPHNPELNSGYATVMYRLENQDNRFYANNNCECLELLKRAVTLNENDSV 217
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILKERP 212
K L AL Y +G+ + + ++ L++ P
Sbjct: 218 IKALLALKYHYLGRGEEGETIMEEALRQTP 247
>gi|389584517|dbj|GAB67249.1| hypothetical protein PCYB_112700, partial [Plasmodium cynomolgi
strain B]
Length = 289
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRG-RNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
F+ +L EP ++ L + GN+ R N AL + + ++ IEPN E L A CY+ +
Sbjct: 195 FKIILAAEPNHIPTLFSL--GNLYRYIDNHIALSYFEAILKIEPNNTEVLSLIASCYDNL 252
Query: 195 GKLSTA 200
GKL+ A
Sbjct: 253 GKLNEA 258
>gi|209520241|ref|ZP_03269010.1| TPR repeat-containing protein [Burkholderia sp. H160]
gi|209499316|gb|EDZ99402.1| TPR repeat-containing protein [Burkholderia sp. H160]
Length = 579
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 34/50 (68%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
E EE++ ++LE +P++V+AL+ + + ++ GR +E E +K+ + + P +
Sbjct: 29 EAEELYREILELKPKHVDALRWLGELALQTGRLQEGAELLKKTLALNPKQ 78
>gi|118356032|ref|XP_001011275.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89293042|gb|EAR91030.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 1013
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP 178
K E E F+K LE +P+N+E LK ++ N + + E+L+ +LI +P
Sbjct: 61 KKEASEYFQKALELDPKNIEILKKIVTLNNNQQKYSESLQLSNQLIQNDP 110
>gi|449018851|dbj|BAM82253.1| similar to psbB mRNA maturation factor Mbb1 [Cyanidioschyzon
merolae strain 10D]
Length = 712
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Query: 128 GKSE-VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLL 186
G SE +E+FE L ++PRNV L+ ++R G + EA + +R ++ P+ V
Sbjct: 267 GHSERAQELFEAGLARDPRNVFLLQAFGMFHLRNGASVEACAYFERAVESNPSHVPSWQA 326
Query: 187 QALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ G A F+ L+ P+ + L G
Sbjct: 327 YGIALSKQGDWEHAAAKFEQALRLDPVSVPTLQAYG 362
>gi|303231671|ref|ZP_07318394.1| tetratricopeptide repeat protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302513620|gb|EFL55639.1| tetratricopeptide repeat protein [Veillonella atypica
ACS-049-V-Sch6]
Length = 209
Score = 37.0 bits (84), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 140 LEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199
++ N EA + G + L K+ D++PN V A+ Y+L G+L+
Sbjct: 75 IQNNDNNAEAYSIRGFATALNGDTAKGLIDTKKAYDLDPNNVANYYNMAMVYKLQGQLNE 134
Query: 200 AKRLFKDILKERP 212
+K+ F+ +L++ P
Sbjct: 135 SKQWFEKVLEKDP 147
>gi|307353638|ref|YP_003894689.1| tetratricopeptide repeat-containing protein [Methanoplanus
petrolearius DSM 11571]
gi|307156871|gb|ADN36251.1| Tetratricopeptide TPR_2 repeat protein [Methanoplanus petrolearius
DSM 11571]
Length = 155
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 115 ASENLKEKRDALMGK-SEVEEMFEKLLEKEPRNVEA--LKVVMQGNMRRGRNKEALEFVK 171
+ EN +EK K + E +++++E +P N A ++ + N +++EALE
Sbjct: 27 SGENDQEKIKEFAAKVNSSREYYDQMVESDPNNATAWCIRGMYYNNGNFNQDEEALESSN 86
Query: 172 RLIDIEPN-EVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
R ++I+P + W LL+ G +S A+ F++ ++ P L + + G Y S
Sbjct: 87 RALEIDPEYGLAW-LLRGYVLLNTGNVSEAELSFENAIRYDPGLEEFIPEAGSYNS 141
>gi|145494935|ref|XP_001433461.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400579|emb|CAK66064.1| unnamed protein product [Paramecium tetraurelia]
Length = 512
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK--EALEFVKRLIDIEPNEVE 182
AL + + ++ ++ EP+N + L M+G + N+ +A++F+ R ++I+P VE
Sbjct: 229 ALNKYDQASKTLDRAIQLEPKNFDVL--FMKGLCLKILNEVDKAIQFLDRALEIQPKNVE 286
Query: 183 WKLLQALCYELMGKLSTAKRLFKD 206
L + +C +++ K A ++F +
Sbjct: 287 VLLNKGICLQMLNKFDLASKVFDN 310
>gi|325109130|ref|YP_004270198.1| hypothetical protein Plabr_2576 [Planctomyces brasiliensis DSM
5305]
gi|324969398|gb|ADY60176.1| Tetratricopeptide TPR_1 repeat-containing protein [Planctomyces
brasiliensis DSM 5305]
Length = 855
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI--EPNEVEWKLLQALCY 191
EM K +E EP N L + R GR +E+L+++++ ++ E + V W L CY
Sbjct: 754 EMIGKAIEAEPENKAYLDSMGWVLFRLGRYEESLKYLEQAVEDSEEGDAVLWDHL-GDCY 812
Query: 192 ELMGKLSTAKRLFKDILK 209
+ +GK A+ +K LK
Sbjct: 813 DKLGKAEKAQEAWKSALK 830
>gi|82701510|ref|YP_411076.1| hypothetical protein Nmul_A0376 [Nitrosospira multiformis ATCC
25196]
gi|82409575|gb|ABB73684.1| Tetratricopeptide TPR_4 [Nitrosospira multiformis ATCC 25196]
Length = 929
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 44/72 (61%), Gaps = 4/72 (5%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
FE +LEK+ +N++A+ + + +G+N++A E+++R + P+ ++ +L Y +G
Sbjct: 533 FEAILEKDKKNIQAMVALAGLAVNQGQNQKATEWLERAMQANPDVLQPAILLGTHYLRLG 592
Query: 196 K----LSTAKRL 203
+ L+ AK+L
Sbjct: 593 EKQKALALAKKL 604
>gi|110738736|dbj|BAF01292.1| putative O-GlcNAc transferase [Arabidopsis thaliana]
Length = 808
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 127 MGKSEVE-EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E+F++ ++ +P +V+AL + M GR + A E R++ + PN +L
Sbjct: 391 MGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQL 450
Query: 186 LQALCYELMGKLSTAKRLFKDILK 209
+A+ G+ AKR K+ LK
Sbjct: 451 NKAVSLLGAGETEEAKRALKEALK 474
>gi|300868209|ref|ZP_07112841.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
gi|300333833|emb|CBN58025.1| putative Glycosyl transferase, family 2 [Oscillatoria sp. PCC 6506]
Length = 1545
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207
EA ++ +G + +G+ +A+ +R + ++P+ +KLL ++ MGK+ AK +
Sbjct: 294 EAYNILAEGYLAQGKFPQAIAACRRSLQLKPDAAIYKLL-GNAFQAMGKVEDAKNCYLKA 352
Query: 208 LKERPLLLRALHDLGRYVSMTLQIQS 233
L+ P A +LG Q QS
Sbjct: 353 LEINPNFAEAYANLGSLYGGQQQWQS 378
>gi|406982607|gb|EKE03902.1| TPR Domain containing protein [uncultured bacterium]
Length = 666
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK--EALEFVKRLIDIEPNEVEWKLLQ 187
++ + + K L+ + RNV AL + GN+ + +N+ EA + +R ++I+P + K
Sbjct: 529 NKATDAYNKALDLDRRNVGAL--IKLGNIYKEKNRLLEAQNYYERTLEIDPANINAKYNL 586
Query: 188 ALCYELMGKLSTAKRLFKDILKERP 212
AL G AK ++ I++ P
Sbjct: 587 ALILVEFGDTKQAKTYYQQIIQSSP 611
>gi|332799288|ref|YP_004460787.1| hypothetical protein TepRe1_1334 [Tepidanaerobacter acetatoxydans
Re1]
gi|332697023|gb|AEE91480.1| Tetratricopeptide TPR_1 repeat-containing protein
[Tepidanaerobacter acetatoxydans Re1]
Length = 404
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E+++K+L K P N+ A+ +N EALE+ ++I+PN + + + C
Sbjct: 220 EAAEIYKKILSKTPHNIIAINNCASCLAECDKNYEALEYYNIGLNIDPNNPDLLINKGYC 279
Query: 191 YELMGKLSTAKRLFKD---ILKERPLLLR----ALHDLGRY 224
+G+ + A + I+K +L L LG+Y
Sbjct: 280 LYKLGQYNIALECLNEAEKIVKNDIILYNNKALCLVALGKY 320
>gi|326318108|ref|YP_004235780.1| type 12 methyltransferase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374944|gb|ADX47213.1| Methyltransferase type 12 [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 436
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E+ EKL +EPRN+ L V+ R G A+ ++R +++ P +V+ + L A
Sbjct: 97 EAVELAEKLAAREPRNLVVLAGVVDIAHRAGDLDMAVRHLRRGLEMVPGDVQLRRLLARD 156
Query: 191 YELMGKLSTAKRLFKDILKERP 212
G+ + A +++ ++ E P
Sbjct: 157 LSDQGQHAEALQVWGALIDENP 178
>gi|108761571|ref|YP_631417.1| hypothetical protein MXAN_3218 [Myxococcus xanthus DK 1622]
gi|108465451|gb|ABF90636.1| tetratricopeptide repeat protein [Myxococcus xanthus DK 1622]
Length = 188
Score = 37.0 bits (84), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+K+L +P++V AL R +EAL +R I+++P E E ALC +G
Sbjct: 28 FDKVLAVDPKHVPALTAKGASLATLERFEEALRCFERAIEVDPTEAEAHRDAALCQLELG 87
Query: 196 KLSTAKRLFK 205
+ A +L +
Sbjct: 88 EPEAAAQLLQ 97
>gi|77021665|gb|ABA60691.1| polaris [Danio rerio]
Length = 824
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLR 216
++A+++ +R I+P +V+W+L+ A CY G A +K+I ++ P L+R
Sbjct: 638 EKAIQYFERATLIQPTQVKWQLMVASCYRRSGNYLKALETYKEIHRKFPENVECLRFLVR 697
Query: 217 ALHDLG 222
D+G
Sbjct: 698 LCTDMG 703
>gi|94971629|ref|YP_593677.1| hypothetical protein Acid345_4603 [Candidatus Koribacter versatilis
Ellin345]
gi|94553679|gb|ABF43603.1| Tetratricopeptide repeat protein [Candidatus Koribacter versatilis
Ellin345]
Length = 722
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 19/102 (18%)
Query: 123 RDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQ------GNMRRGRNKE------ALEFV 170
RDA++ E+ L+++P+NV+A +++ + G+M+ G N+ A+E
Sbjct: 131 RDAVLEAQEI-------LKRDPKNVDAHRLLGRIYLRSLGDMQSGNNQSRDMQRLAIEQY 183
Query: 171 KRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
+ ++ ++P VE LL Y L+ A++ FK ++ +P
Sbjct: 184 EEIVKLDPTSVEDHLLLGRLYSYSNDLTKAEKEFKTAVQIQP 225
>gi|428214019|ref|YP_007087163.1| glycosyl transferase group 1,tetratricopeptide repeat
protein,tetratricopeptide repeat protein [Oscillatoria
acuminata PCC 6304]
gi|428002400|gb|AFY83243.1| glycosyl transferase group 1,tetratricopeptide repeat
protein,tetratricopeptide repeat protein [Oscillatoria
acuminata PCC 6304]
Length = 2510
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 22/93 (23%), Positives = 48/93 (51%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
++ + + ++L +EP N+ AL ++ ++G N A+ + ++ + I PN E+ A
Sbjct: 32 AQAQTLCREILHREPENLLALNLLGTIASQQGDNLGAISWYQQAVKIHPNVPEFHYNLAN 91
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+L G+ A ++ + RP +A ++LG
Sbjct: 92 SLKLEGQKEEAIAHYQQAITLRPNYTKACYNLG 124
>gi|115523116|ref|YP_780027.1| hypothetical protein RPE_1094 [Rhodopseudomonas palustris BisA53]
gi|115517063|gb|ABJ05047.1| Tetratricopeptide TPR_2 repeat protein [Rhodopseudomonas palustris
BisA53]
Length = 735
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 44/95 (46%)
Query: 115 ASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLI 174
A L E A SE + E++L + RNV AL++ + GR ++ + +++ +
Sbjct: 279 ARLKLAEILIAQQNPSEAGLLLEEVLRSDARNVGALRLRAAIRIEEGRLEDGISDIRQAL 338
Query: 175 DIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILK 209
+ +PN L A+ YE G + A + D K
Sbjct: 339 NDQPNSPVLLALLAIAYEKQGAIDLADKQLNDATK 373
>gi|399029473|ref|ZP_10730355.1| Tfp pilus assembly protein PilF [Flavobacterium sp. CF136]
gi|398072755|gb|EJL63959.1| Tfp pilus assembly protein PilF [Flavobacterium sp. CF136]
Length = 229
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 127 MGKSEVEE---MFEKLLEKEPRNVEALKVVMQG--NMRRGRNKEALEFVKRLIDIEPNEV 181
G S+ +E +E+ L ++ EALK +G + G ++A++ K+ I I+ N
Sbjct: 19 CGNSQNKEDVKYYEQKLNSPTKSTEALKYYTEGYNEFQNGNYEDAIKNYKKAIQIDSNYT 78
Query: 182 EWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ AL + + KL A+ +K LK+ P A+H+LG
Sbjct: 79 DAIDNCALSFRKLNKLDDAECYYKLSLKKLPKNELAMHNLG 119
>gi|198284394|ref|YP_002220715.1| hypothetical protein Lferr_2307 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667728|ref|YP_002427059.1| hypothetical protein AFE_2681 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415959247|ref|ZP_11557585.1| TPR domain protein [Acidithiobacillus sp. GGI-221]
gi|198248915|gb|ACH84508.1| TPR repeat-containing protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519941|gb|ACK80527.1| TPR domain protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339832580|gb|EGQ60486.1| TPR domain protein [Acidithiobacillus sp. GGI-221]
Length = 653
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E E++ LL +PR+ +A + M R RN EA K+ + I+P+ E L A+
Sbjct: 123 EDEQVLRNLLASDPRHAQAWCNLAVMYMGRQRNAEAERLFKQSLAIDPDYPEGLLNYAVL 182
Query: 191 YELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
E + + A++ + ++ RP +A +LG
Sbjct: 183 LENLERRDEAEKALRRAVEIRPDYYKAFTNLG 214
>gi|125975528|ref|YP_001039438.1| TPR repeat-containing protein [Clostridium thermocellum ATCC 27405]
gi|125715753|gb|ABN54245.1| Tetratricopeptide TPR_1 repeat-containing protein [Clostridium
thermocellum ATCC 27405]
Length = 591
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 72/170 (42%), Gaps = 12/170 (7%)
Query: 71 LSPENKIMKVLKEKAVIFLAGSVIFLGSFGS---NLRPSVALPGKMRASENL--KEKRDA 125
LSPEN I+ V +A + S+ G + NL ++ LP K + ++ K A
Sbjct: 374 LSPENIILCV---QAYTNIGSSLSEKGMYEEALKNLDKALELPSKNAKAISIAYSNKAYA 430
Query: 126 LMGKSEVEEMFE---KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
L+G + E+ E K +E +P NV MR R KEALE I + +
Sbjct: 431 LIGLEKFEDALECANKAIEADPSNVMGYSNKSSVLMRLSRYKEALECCDEAIKLNIADYA 490
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232
+ L E GKL A F L+ P A ++ R VS L I+
Sbjct: 491 VYNNKGLALESQGKLGKALEAFNKSLELNPDYKNAQDNIQR-VSTKLTIR 539
>gi|406953657|gb|EKD82827.1| TPR Domain containing protein, partial [uncultured bacterium]
Length = 1487
Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
++V E+ ++ + +P N E ++ + R G ++ A+ +K LI +P+ + ++
Sbjct: 653 AQVIEILQEARQTQPGNNEISSIISEAYARTGDHEMAILELKTLISNDPSNTQARIQLGR 712
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG-RYVSM 227
Y + + A FKDI+ + P A +LG Y+SM
Sbjct: 713 VYSISNMIDQASMTFKDIIADEPDNPVARTELGCIYLSM 751
>gi|357113001|ref|XP_003558293.1| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like [Brachypodium distachyon]
Length = 842
Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+K ++ +P +V+AL + NM GR A E R++ I PN +L +A+ G
Sbjct: 435 FQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQG 494
Query: 196 KLSTAKRLFKDILK 209
+ AK+ K+ K
Sbjct: 495 ESEDAKKALKEAFK 508
>gi|297823015|ref|XP_002879390.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297325229|gb|EFH55649.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 800
Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 127 MGKSEVE-EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E+F++ ++ +P +V+AL + M GR + A E R++ + PN +L
Sbjct: 388 MGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQL 447
Query: 186 LQALCYELMGKLSTAKRLFKDILK 209
+A+ G+ AKR K+ LK
Sbjct: 448 NKAVSLLGAGETEEAKRALKEALK 471
>gi|340506921|gb|EGR32964.1| hypothetical protein IMG5_065320 [Ichthyophthirius multifiliis]
Length = 384
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKE--ALEFVKRLIDIEPNEVEWKLLQALCY 191
E F++ L+ PR A K + G++ N E AL++ ++ ++ + N++E K+ A CY
Sbjct: 120 EAFKETLKINPRFSGAFKAI--GSIFYKNNSEQIALKYYQKALECDQNDIESKIGIANCY 177
Query: 192 ELMGKLSTAKRLFKDILK 209
L+ A + +K+IL+
Sbjct: 178 YLIENFDLAIQYYKEILQ 195
>gi|300795427|ref|NP_001179690.1| transmembrane and TPR repeat-containing protein 1 [Bos taurus]
Length = 939
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P A NL +L S EE +++ L+ R E L + GR +EAL+
Sbjct: 704 PSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVA-RKTEILSPLGALYYNTGRYEEALQT 762
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKE 210
+ + ++P++ E +L A +MG+ A+++ DI+ E
Sbjct: 763 YREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSDIVSE 803
>gi|222624615|gb|EEE58747.1| hypothetical protein OsJ_10236 [Oryza sativa Japonica Group]
Length = 827
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+K ++ +P +V+AL + NM GR A E R++ I PN +L +A+ G
Sbjct: 420 FQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQG 479
Query: 196 KLSTAKRLFKDILK 209
+ AK+ K+ K
Sbjct: 480 ESEEAKKALKEAFK 493
>gi|320102427|ref|YP_004178018.1| hypothetical protein Isop_0879 [Isosphaera pallida ATCC 43644]
gi|319749709|gb|ADV61469.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera
pallida ATCC 43644]
Length = 706
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 127 MGKSEVEEM---FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183
+G + EE +E+ + P +AL + RG ++ A++ +R + ++P ++
Sbjct: 119 LGPTRFEEAARHYERAVALRPHFAKALYNYGNLKLERGLSRGAVDLFRRAVALQPEWIDA 178
Query: 184 KLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++ A+ EL + A+ + D+LK P L A LG
Sbjct: 179 RVNLAVSLELDHAWNEAEAAWTDVLKRDPGRLEARESLG 217
>gi|414154134|ref|ZP_11410454.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411454319|emb|CCO08358.1| Tetratricopeptide TPR_1 repeat-containing protein [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 18/126 (14%)
Query: 92 SVIFLGSFGSNLRPSVALPG-----KMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRN 146
+V+ LG GS SV G K +A+ N E+R AL+ EK +K P++
Sbjct: 27 AVLSLGLIGS----SVVWTGLGSLQKEQAAPNSPEERLALL---------EKQSQKNPQD 73
Query: 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKD 206
E L + + G+ K+A E ++ I ++P ++ + AL Y G L A + K
Sbjct: 74 KELLLTLAAYYRQAGKLKQAAEAYQKAIQLDPKDIAARQELALLYYAQGDLPAAGQALKQ 133
Query: 207 ILKERP 212
L +P
Sbjct: 134 ALAVQP 139
>gi|186682271|ref|YP_001865467.1| hypothetical protein Npun_R1867 [Nostoc punctiforme PCC 73102]
gi|186464723|gb|ACC80524.1| Tetratricopeptide TPR_2 repeat protein [Nostoc punctiforme PCC
73102]
Length = 409
Score = 36.6 bits (83), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 7/127 (5%)
Query: 100 GSNLRPSVALPGKMRASENLKEKRDALMGKSE---VEEMFEKLLEKEPRNVEALKVVMQG 156
GSN ALPG A N +E + L + + E F K +E EP V+A +
Sbjct: 37 GSN---RAALPGNKNAVANFEEGSN-LYKQGDFKGAEVAFRKAIELEPNFVQAYIALANT 92
Query: 157 NMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLR 216
+G+ +EA+ K+ I ++P++ L + +L A +K L P
Sbjct: 93 LDDQGKPQEAIAHYKKAISLDPHDSGAYFNLGLTLARLNQLEPAIAQYKKALSLEPNYAD 152
Query: 217 ALHDLGR 223
A ++LG
Sbjct: 153 AHYNLGN 159
>gi|428214310|ref|YP_007087454.1| hypothetical protein Oscil6304_3996 [Oscillatoria acuminata PCC
6304]
gi|428002691|gb|AFY83534.1| hypothetical protein Oscil6304_3996 [Oscillatoria acuminata PCC
6304]
Length = 312
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+E ++++EP N AL+ +++ ++ A+ +++L+ I P ++ +L A + +G
Sbjct: 73 YELVVQREPNNETALRGLLETRLKLQDIPGAIAALEQLVAINPERTDYAVLLAQGKQQIG 132
Query: 196 KLSTAKRLFKDILKERPLLLRALHDLGRYVSMTL 229
A +++ IL+ +P + AL YV++ L
Sbjct: 133 DRDGASTVYRSILETQPGNINALQG---YVNLLL 163
>gi|322437035|ref|YP_004219247.1| hypothetical protein AciX9_3462 [Granulicella tundricola MP5ACTX9]
gi|321164762|gb|ADW70467.1| Tetratricopeptide repeat [Granulicella tundricola MP5ACTX9]
Length = 271
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 22/96 (22%)
Query: 98 SFGSNLRPSVALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGN 157
++ S + P++ P ENLK +AL G F++++ K+P +V AL + +
Sbjct: 72 TYSSQVVPNLNTP------ENLKLANNALAG-------FKEVIAKDPSDVTALSQIAYID 118
Query: 158 MRRGRNKEALEFVKRLIDIEPN---------EVEWK 184
G KEA E +++I ++PN +V+WK
Sbjct: 119 RITGHIKEAKEDERKVIAVQPNNAEANYTIGQVDWK 154
>gi|78189724|ref|YP_380062.1| TPR repeat-containing protein [Chlorobium chlorochromatii CaD3]
gi|78171923|gb|ABB29019.1| TPR repeat [Chlorobium chlorochromatii CaD3]
Length = 492
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197
KL+ EP N EAL ++ ++ + EALE +RL+ ++P E L A +G+
Sbjct: 124 KLVTLEPDNREALTMLAYEHLAARQPNEALEVFQRLLQLDPANAEVLLSSAEVALELGRR 183
Query: 198 STAKRLFKDIL 208
S A R F +L
Sbjct: 184 SDALRFFNQLL 194
>gi|357023194|ref|ZP_09085404.1| hypothetical protein MEA186_00976 [Mesorhizobium amorphae
CCNWGS0123]
gi|355544949|gb|EHH14015.1| hypothetical protein MEA186_00976 [Mesorhizobium amorphae
CCNWGS0123]
Length = 182
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 47/94 (50%)
Query: 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP 178
++E+ +G E + L+++P NV+A + + + + R EAL+ + ++ P
Sbjct: 61 MRERIARAVGPDTDERALQDELKQQPGNVDAAIRLTKALVAQKRESEALQILDNVLLAAP 120
Query: 179 NEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
N + + + ++L G+ A+ L++ LK P
Sbjct: 121 NNLRALNAKGVVFDLEGRHDAAQALYRQALKTEP 154
>gi|261403114|ref|YP_003247338.1| hypothetical protein Metvu_0998 [Methanocaldococcus vulcanius M7]
gi|261370107|gb|ACX72856.1| TPR repeat-containing protein [Methanocaldococcus vulcanius M7]
Length = 589
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 55/110 (50%), Gaps = 15/110 (13%)
Query: 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177
NLK+ ++A+ F+K++E P++V++ ++ + + ALE+V ++ I
Sbjct: 258 NLKDYKNAIY-------CFKKVIELNPKDVDSYLFIINAYLYQKDYNGALEYVNEILKIN 310
Query: 178 PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227
P+ WK +++ G + + + +KD + L+ + D Y+S+
Sbjct: 311 PH---WKF-----WKIKGDIYYSMKRYKDAIDSYKNALKYVKDEEIYISI 352
>gi|156101249|ref|XP_001616318.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805192|gb|EDL46591.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 289
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRG-RNKEALEFVKRLIDIEPNEVEWKLLQALCYELM 194
F+ +L EP ++ L + GN+ R N AL + + ++ IEPN E L A CY+ +
Sbjct: 195 FKIILSAEPNHIPTLFSL--GNLYRYIDNHIALSYFEAILKIEPNNTEVLSLIASCYDNL 252
Query: 195 GKLSTA 200
GKL+ A
Sbjct: 253 GKLNEA 258
>gi|125543209|gb|EAY89348.1| hypothetical protein OsI_10852 [Oryza sativa Indica Group]
Length = 848
Score = 36.6 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+K ++ +P +V+AL + NM GR A E R++ I PN +L +A+ G
Sbjct: 441 FQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQG 500
Query: 196 KLSTAKRLFKDILK 209
+ AK+ K+ K
Sbjct: 501 ESEEAKKALKEAFK 514
>gi|270295466|ref|ZP_06201667.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274713|gb|EFA20574.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 606
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177
N +E+ D ++G + ++ E++ + E ++E ++ +Q + +K A ++ L++
Sbjct: 176 NRQEEYDKVIGI--LNKLEERMGKNEQLSMEKFRIYLQ----KKDDKSAFHEIESLVEEY 229
Query: 178 PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230
PN++ ++++ Y GK A ++K +L E P A++ L Y T Q
Sbjct: 230 PNDMRYQVVLGDVYMQNGKKQEAYEIYKKVLAEEPDNAMAMYSLASYYEETGQ 282
>gi|444912231|ref|ZP_21232396.1| TPR domain protein, putative component of TonB system [Cystobacter
fuscus DSM 2262]
gi|444717139|gb|ELW57974.1| TPR domain protein, putative component of TonB system [Cystobacter
fuscus DSM 2262]
Length = 4089
Score = 36.6 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EVEWKLLQALCY--- 191
E++ ++P+N + L+ + + + R G N+E ++R + EP+ + LL L +
Sbjct: 1774 LEEVSRRDPKNKQVLESISRVHRRTGANRELAMVMRRQVAAEPSVPAQVNLLFELAHLAE 1833
Query: 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226
E +G + A + ++++L RP A LGR ++
Sbjct: 1834 ETLGDKALAAQTYREVLDRRPEDANAFKLLGRVLT 1868
>gi|290892642|ref|ZP_06555634.1| TPR domain-containing protein [Listeria monocytogenes FSL J2-071]
gi|404408855|ref|YP_006691570.1| hypothetical protein LMOSLCC2376_2372 [Listeria monocytogenes
SLCC2376]
gi|290557702|gb|EFD91224.1| TPR domain-containing protein [Listeria monocytogenes FSL J2-071]
gi|404243004|emb|CBY64404.1| TPR domain protein [Listeria monocytogenes SLCC2376]
Length = 491
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204
R VEA R R KEA+ ++ R ++EP E A+CY +G+ + +L
Sbjct: 24 RGVEAF--------RDQRIKEAIRYLVRASELEPGEAVILCQLAICYTEIGQFHKSNQLL 75
Query: 205 KDILKER 211
+D+L++R
Sbjct: 76 RDVLEQR 82
>gi|224028305|gb|ACN33228.1| unknown [Zea mays]
Length = 840
Score = 36.6 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+ ++ +P +V+AL + NM GR A E R++ I PN +L +A+ G
Sbjct: 433 FQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQG 492
Query: 196 KLSTAKRLFKDILK 209
+ AK+ KD K
Sbjct: 493 ESEEAKKALKDAFK 506
>gi|217963419|ref|YP_002349097.1| hypothetical protein LMHCC_0121 [Listeria monocytogenes HCC23]
gi|386009196|ref|YP_005927474.1| TPR domain-containing protein [Listeria monocytogenes L99]
gi|386027808|ref|YP_005948584.1| hypothetical protein LMM7_2521 [Listeria monocytogenes M7]
gi|217332689|gb|ACK38483.1| TPR domain protein [Listeria monocytogenes HCC23]
gi|307572006|emb|CAR85185.1| TPR domain protein [Listeria monocytogenes L99]
gi|336024389|gb|AEH93526.1| hypothetical protein LMM7_2521 [Listeria monocytogenes M7]
Length = 491
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204
R VEA R R KEA+ ++ R ++EP E A+CY +G+ + +L
Sbjct: 24 RGVEAF--------RDQRIKEAIRYLVRASELEPGEAVILCQLAICYTEIGQFHKSNQLL 75
Query: 205 KDILKER 211
+D+L++R
Sbjct: 76 RDVLEQR 82
>gi|115452075|ref|NP_001049638.1| Os03g0263900 [Oryza sativa Japonica Group]
gi|108707321|gb|ABF95116.1| calcium-binding EF hand family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113548109|dbj|BAF11552.1| Os03g0263900 [Oryza sativa Japonica Group]
Length = 848
Score = 36.6 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+K ++ +P +V+AL + NM GR A E R++ I PN +L +A+ G
Sbjct: 441 FQKAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQG 500
Query: 196 KLSTAKRLFKDILK 209
+ AK+ K+ K
Sbjct: 501 ESEEAKKALKEAFK 514
>gi|451981749|ref|ZP_21930095.1| exported hypothetical protein [Nitrospina gracilis 3/211]
gi|451761015|emb|CCQ91360.1| exported hypothetical protein [Nitrospina gracilis 3/211]
Length = 460
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 8/123 (6%)
Query: 105 PSVALPGKMRASENLKEKRD-ALMGK-SEVEEMFEKLLEKEPRN--VEA-LKVVMQGNMR 159
P+ + G ++ +LK ++ +L+GK E E F+K LE++P N ++A L V + R
Sbjct: 18 PAGSFAGDFDSTPHLKRAQEMSLLGKWPEAVEAFQKALEEQPDNNWIQANLGVALS---R 74
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALH 219
RN EAL ++ + + + E++ L+ L + + L+ A + + L+ L A +
Sbjct: 75 AERNMEALLAFEKALQMGYDNAEFRYLRGLTFAKVNLLADAAKEIELALEMDSQLKFADY 134
Query: 220 DLG 222
DLG
Sbjct: 135 DLG 137
>gi|356575229|ref|XP_003555744.1| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like isoform 1 [Glycine max]
gi|356575231|ref|XP_003555745.1| PREDICTED: uncharacterized TPR repeat-containing protein
At1g05150-like isoform 2 [Glycine max]
Length = 802
Score = 36.6 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 127 MGKSEVE-EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E+F+K ++ +P +V+AL + M GR + A E R++ + PN W+
Sbjct: 391 MGEDERAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPN--HWRA 448
Query: 186 LQALCYELMGKLST--AKRLFKDILK 209
L L+G T AKR K+ LK
Sbjct: 449 LLNKAVSLLGAGETEEAKRALKEALK 474
>gi|324513942|gb|ADY45705.1| Aspartyl/asparaginyl beta-hydroxylase [Ascaris suum]
Length = 372
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212
RG + +AL + LID P+E++ + AL + +MG+ A++LF+D+L+ P
Sbjct: 43 RGAHHKALIAQRSLIDRYPDEIQLQNDFALTFLMMGRQDDARKLFEDVLRIDP 95
>gi|224085786|ref|XP_002307696.1| predicted protein [Populus trichocarpa]
gi|222857145|gb|EEE94692.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 127 MGKSEVE-EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E+F+K ++ +P +V+AL + M GR + A E R++ + PN +L
Sbjct: 387 MGEDEKAIEVFQKAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLAVWPNHWRAQL 446
Query: 186 LQALCYELMGKLSTAKRLFKDILK 209
+A+ G+ AK+ K+ LK
Sbjct: 447 NKAVSLLGAGETEEAKKALKEALK 470
>gi|222056573|ref|YP_002538935.1| hypothetical protein Geob_3491 [Geobacter daltonii FRC-32]
gi|221565862|gb|ACM21834.1| Tetratricopeptide TPR_2 repeat protein [Geobacter daltonii FRC-32]
Length = 264
Score = 36.6 bits (83), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 10/108 (9%)
Query: 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-WKLL 186
GK+ VE F+ E EP N E + + G+ EA+E +K + P ++E W L
Sbjct: 22 GKASVE--FKACTEVEPDNAEGYFYLGEALAETGKQAEAIESIKAGLKRAPEDIEAWTSL 79
Query: 187 QALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQSL 234
+ +E G+ A +K +++ RP + YVS+ L SL
Sbjct: 80 GDILFE-SGQHKEAIAAYKKVIELRP------AEADGYVSLGLVYNSL 120
>gi|226506424|ref|NP_001147573.1| calcium ion binding protein [Zea mays]
gi|195612268|gb|ACG27964.1| calcium ion binding protein [Zea mays]
gi|414865964|tpg|DAA44521.1| TPA: calcium ion binding protein [Zea mays]
Length = 840
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+ ++ +P +V+AL + NM GR A E R++ I PN +L +A+ G
Sbjct: 433 FQTAIDLKPGHVDALYNLGGLNMDAGRFVRAAEMYTRVLSIRPNHWRAQLNKAVALLGQG 492
Query: 196 KLSTAKRLFKDILK 209
+ AK+ KD K
Sbjct: 493 ESEEAKKALKDAFK 506
>gi|449677383|ref|XP_002164266.2| PREDICTED: transmembrane and TPR repeat-containing protein 2-like
[Hydra magnipapillata]
Length = 791
Score = 36.6 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 126 LMGKSEVEEMF---EKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
L+ +S+ +E +K L+ PR+ ++L ++ + AL + +L DI+ N+
Sbjct: 684 LVSQSKFDEALLALKKALQILPRDEDSLSIISSIYREMKDYENALYYQLQLNDIKSNDAI 743
Query: 183 WKLLQALCYELMGKLSTAKRLFKDILK---ERPLLLRALHDL 221
L Y LMG+L AK+ + D LK P+LL + L
Sbjct: 744 ALLNLGALYHLMGRLKDAKKSYADALKLDPTNPILLENIKKL 785
>gi|428309254|ref|YP_007120231.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
gi|428250866|gb|AFZ16825.1| Flp pilus assembly protein TadD [Microcoleus sp. PCC 7113]
Length = 325
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ G ++A++ K + + PN E L Y GK+ AK+LF+ LK P A
Sbjct: 181 QAGDQEQAIDQFKNALQVSPNAPEPAYHIGLIYLQQGKIEDAKKLFQQALKINPKYAEAH 240
Query: 219 HDLG 222
++LG
Sbjct: 241 YNLG 244
>gi|343958710|dbj|BAK63210.1| intraflagellar transport 88 homolog [Pan troglodytes]
Length = 824
Score = 36.6 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|282916105|ref|ZP_06323868.1| hypothetical protein SATG_01629 [Staphylococcus aureus subsp.
aureus D139]
gi|282320053|gb|EFB50400.1| hypothetical protein SATG_01629 [Staphylococcus aureus subsp.
aureus D139]
Length = 479
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|119628671|gb|EAX08266.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_a
[Homo sapiens]
Length = 796
Score = 36.6 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 591 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 650
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 651 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 710
Query: 222 G 222
G
Sbjct: 711 G 711
>gi|91203975|emb|CAJ71628.1| similar to O-linked GlcNAc transferase [Candidatus Kuenenia
stuttgartiensis]
Length = 301
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%)
Query: 110 PGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF 169
P NL + + + ++M++K L P N+EAL + + G A+E
Sbjct: 77 PDNAETLNNLGYVYEKMFRFASAKQMYKKALTINPENIEALVNIAKILELEGNYNGAIEQ 136
Query: 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
K+ I P+ + A+ Y+ A R ++ +L + P ++A+ +LG
Sbjct: 137 YKKTIARYPDAIFPHFCLAVLYDTHDMFDDAIREYELVLGKDPHYVKAMFNLG 189
>gi|755486|gb|AAA86720.1| mutations in the mouse Tg737 gene cause polycystic kidney disease
[Homo sapiens]
Length = 824
Score = 36.6 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|297693599|ref|XP_002824108.1| PREDICTED: LOW QUALITY PROTEIN: intraflagellar transport protein 88
homolog [Pongo abelii]
Length = 840
Score = 36.6 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 598 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 657
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 658 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 717
Query: 222 G 222
G
Sbjct: 718 G 718
>gi|118376183|ref|XP_001021274.1| SLEI family protein [Tetrahymena thermophila]
gi|89303041|gb|EAS01029.1| SLEI family protein [Tetrahymena thermophila SB210]
Length = 2889
Score = 36.6 bits (83), Expect = 8.7, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 45/89 (50%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+ + + +E +P+ V+A + +G KEALE K+ ++I+P + AL YE
Sbjct: 268 QCYRRAIEIDPKQVDAYNNIGLIYYYKGMIKEALESYKKALEIDPKYYKAYHNSALAYEK 327
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLG 222
+ A + +K ++ P L++L LG
Sbjct: 328 EKLIDEAIQCYKKTIEINPSFLKSLTRLG 356
>gi|379014051|ref|YP_005290287.1| hypothetical protein SAVC_03450 [Staphylococcus aureus subsp.
aureus VC40]
gi|374362748|gb|AEZ36853.1| hypothetical protein SAVC_03450 [Staphylococcus aureus subsp.
aureus VC40]
Length = 287
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|320103063|ref|YP_004178654.1| hypothetical protein Isop_1520 [Isosphaera pallida ATCC 43644]
gi|319750345|gb|ADV62105.1| Tetratricopeptide TPR_1 repeat-containing protein [Isosphaera pallida
ATCC 43644]
Length = 1534
Score = 36.6 bits (83), Expect = 8.7, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180
E+ DALM E E+ P VE ++ + +RRGR +A++ ++L ++P
Sbjct: 1089 EQADALM--ETTRERIEEARRAFPEAVEFVEAACELALRRGRPDQAMQLSQQLDKLDPTS 1146
Query: 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLL-------RALHDLGR 223
+ L +A Y G+ A ++ LK P L L DLGR
Sbjct: 1147 MGGPLTRAQVYLEQGQSVLAVEQMEEALKRNPRRLDLRIRMGELLLDLGR 1196
>gi|398805154|ref|ZP_10564135.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
gi|398092316|gb|EJL82731.1| putative O-linked N-acetylglucosamine transferase, SPINDLY family
[Polaromonas sp. CF318]
Length = 717
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
+ + LE + +VE+ + +++ R GR+ E +R+++++P+ VE L +G
Sbjct: 146 YRRALEMKHDHVESHEKLVKLLGRLGRSNELAAVYRRVLELDPDNVEILYNLGLILRHLG 205
Query: 196 KLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231
++ A F+ ++ RP + AL +LG VS+ L++
Sbjct: 206 RMQDAAMNFRRAVELRPGFIDALCNLGD-VSIGLRL 240
>gi|119628675|gb|EAX08270.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_e
[Homo sapiens]
Length = 824
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|222053752|ref|YP_002536114.1| hypothetical protein Geob_0648 [Geobacter daltonii FRC-32]
gi|221563041|gb|ACM19013.1| TPR repeat-containing protein [Geobacter daltonii FRC-32]
Length = 621
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 47/93 (50%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
++ E ++ + L EP +AL + +GR +EA + ++ + ++P+ + K+ +
Sbjct: 88 ADAETLYRQALTLEPGFSQALNNLGSLCRNQGRLEEAAGYFRQALALDPDYLTAKVNLGI 147
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
L+ S A LF++I++ P A +LG
Sbjct: 148 VLRLLLSFSDAAALFEEIIEAHPECAAAYFNLG 180
>gi|26249529|ref|NP_755569.1| hypothetical protein c3694 [Escherichia coli CFT073]
gi|432505838|ref|ZP_19747558.1| hypothetical protein A17E_02910 [Escherichia coli KTE220]
gi|432652559|ref|ZP_19888305.1| hypothetical protein A1W7_03580 [Escherichia coli KTE87]
gi|433001324|ref|ZP_20189843.1| hypothetical protein A17K_03671 [Escherichia coli KTE223]
gi|433126502|ref|ZP_20312053.1| hypothetical protein WKE_03001 [Escherichia coli KTE160]
gi|433140570|ref|ZP_20325819.1| hypothetical protein WKM_02854 [Escherichia coli KTE167]
gi|433150598|ref|ZP_20335601.1| hypothetical protein WKQ_03246 [Escherichia coli KTE174]
gi|26109937|gb|AAN82142.1|AE016766_230 Hypothetical protein c3694 [Escherichia coli CFT073]
gi|431035981|gb|ELD47357.1| hypothetical protein A17E_02910 [Escherichia coli KTE220]
gi|431188287|gb|ELE87729.1| hypothetical protein A1W7_03580 [Escherichia coli KTE87]
gi|431505641|gb|ELH84246.1| hypothetical protein A17K_03671 [Escherichia coli KTE223]
gi|431642716|gb|ELJ10437.1| hypothetical protein WKE_03001 [Escherichia coli KTE160]
gi|431658124|gb|ELJ25041.1| hypothetical protein WKM_02854 [Escherichia coli KTE167]
gi|431668499|gb|ELJ35023.1| hypothetical protein WKQ_03246 [Escherichia coli KTE174]
Length = 1266
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 125 ALMGKSEVEE---MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
+L K E E+ FEK + K+ ++ E+ N++ R +EA +++ + +++EP+ +
Sbjct: 21 SLYKKKEWEKALLFFEKSIIKKTKHAESYFKAGICNLKLHRYEEAFKYISKALELEPSNI 80
Query: 182 EWKLLQALCYELMGKLS----TAKRLFKDILKER 211
+WK C + KL+ + +D+L+E+
Sbjct: 81 QWKEQLEQCARHLDKLNNHMVSKSSTEEDLLREK 114
>gi|317478463|ref|ZP_07937623.1| tetratricopeptide [Bacteroides sp. 4_1_36]
gi|316905352|gb|EFV27146.1| tetratricopeptide [Bacteroides sp. 4_1_36]
Length = 582
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177
N +E+ D ++G + ++ E++ + E ++E ++ +Q + +K A ++ L++
Sbjct: 152 NRQEEYDKVIGI--LNKLEERMGKNEQLSMEKFRIYLQ----KKDDKSAFHEIESLVEEY 205
Query: 178 PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230
PN++ ++++ Y GK A ++K +L E P A++ L Y T Q
Sbjct: 206 PNDMRYQVVLGDVYMQNGKKQEAYEIYKKVLAEEPDNAMAMYSLASYYEETGQ 258
>gi|150388568|ref|YP_001318617.1| hypothetical protein Amet_0733 [Alkaliphilus metalliredigens QYMF]
gi|149948430|gb|ABR46958.1| TPR repeat-containing protein [Alkaliphilus metalliredigens QYMF]
Length = 589
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%)
Query: 158 MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+ +G +EA+ +++ + P +++ L+A+ + L G L AK + ++ LK +PL
Sbjct: 16 IEQGHYQEAMSLLQKYEKVVPTDIDIYNLKAMIFILTGDLEKAKEILENGLKIKPLDFDI 75
Query: 218 LHDLG 222
L++LG
Sbjct: 76 LYNLG 80
>gi|28329439|ref|NP_006522.2| intraflagellar transport protein 88 homolog isoform 2 [Homo
sapiens]
Length = 824
Score = 36.6 bits (83), Expect = 9.0, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|383454953|ref|YP_005368942.1| hypothetical protein COCOR_02966 [Corallococcus coralloides DSM
2259]
gi|380728946|gb|AFE04948.1| hypothetical protein COCOR_02966 [Corallococcus coralloides DSM
2259]
Length = 188
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195
F+++L +PR+ AL + GRN+EAL+ +R I+++P+ + ALC +G
Sbjct: 29 FDQVLAVDPRHFPALTAKAFALKQLGRNEEALKGFQRAIELDPSAADPHREAALCQLELG 88
Query: 196 KLSTAKRLFKDILKERP 212
+ A L ++ P
Sbjct: 89 EPEAASLLMHRAVQLNP 105
>gi|422810508|ref|ZP_16858919.1| TPR domain protein [Listeria monocytogenes FSL J1-208]
gi|378751398|gb|EHY61988.1| TPR domain protein [Listeria monocytogenes FSL J1-208]
Length = 491
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204
R VEA R R KEA+ ++ R ++EP E A+CY +G+ + +L
Sbjct: 24 RGVEAF--------RDQRIKEAIRYLVRASELEPGEAVILCQLAICYTEIGQFHKSNQLL 75
Query: 205 KDILKER 211
+D+L++R
Sbjct: 76 RDVLEQR 82
>gi|260823344|ref|XP_002604143.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
gi|229289468|gb|EEN60154.1| hypothetical protein BRAFLDRAFT_208090 [Branchiostoma floridae]
Length = 819
Score = 36.6 bits (83), Expect = 9.0, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203
P N+E ++ + + ++A+ + +R I+P++V+W+L+ A C+ G A
Sbjct: 618 PSNIEIIEWLGAYYIDSQFCEKAIHYFERAAVIQPSQVKWQLMVASCHRRSGNYQQALET 677
Query: 204 FKDILKERP-------LLLRALHDLG 222
+K+I + P L+R +DLG
Sbjct: 678 YKEIHSKFPENVECLRFLVRLCNDLG 703
>gi|156744127|ref|YP_001434256.1| hypothetical protein Rcas_4211 [Roseiflexus castenholzii DSM 13941]
gi|156235455|gb|ABU60238.1| TPR repeat-containing protein [Roseiflexus castenholzii DSM 13941]
Length = 522
Score = 36.6 bits (83), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 158 MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+RR R A + R++ P++VE + LCY+ + + + A LF+ +L+ P ++A
Sbjct: 410 VRRNRYDLAAKEFARVLQFWPDDVETNFMLGLCYKELMEPARAIPLFEKVLRRNPRHVQA 469
Query: 218 LHDLG 222
L+ LG
Sbjct: 470 LYYLG 474
>gi|149178589|ref|ZP_01857176.1| TPR repeat [Planctomyces maris DSM 8797]
gi|148842607|gb|EDL56983.1| TPR repeat [Planctomyces maris DSM 8797]
Length = 462
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 158 MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+R GR +EAL +++R + PN + + LQA +E +G+L+ AK+ + E L L
Sbjct: 176 VRSGRVEEALPYIERNLAATPNSLIFNQLQAQAFESLGRLAEAKQARDKV--EHALALVE 233
Query: 218 LH 219
LH
Sbjct: 234 LH 235
>gi|432688371|ref|ZP_19923645.1| hypothetical protein A31G_00574 [Escherichia coli KTE161]
gi|431236794|gb|ELF31992.1| hypothetical protein A31G_00574 [Escherichia coli KTE161]
Length = 1264
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 125 ALMGKSEVEE---MFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181
+L K E E+ FEK + K+ ++ E+ N++ R +EA +++ + +++EP+ +
Sbjct: 21 SLYKKKEWEKALLFFEKSIIKKTKHAESYFKAGICNLKLHRYEEAFKYISKALELEPSNI 80
Query: 182 EWKLLQALCYELMGKLS----TAKRLFKDILKER 211
+WK C + KL+ + +D+L+E+
Sbjct: 81 QWKEQLEQCARHLDKLNNHMVSKSSTEEDLLREK 114
>gi|397526291|ref|XP_003833066.1| PREDICTED: intraflagellar transport protein 88 homolog isoform 2
[Pan paniscus]
Length = 824
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 582 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 641
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 642 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 701
Query: 222 G 222
G
Sbjct: 702 G 702
>gi|283769926|ref|ZP_06342818.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus H19]
gi|384549625|ref|YP_005738877.1| hypothetical protein SAA6159_00720 [Staphylococcus aureus subsp.
aureus JKD6159]
gi|416842487|ref|ZP_11905036.1| TPR domain-containing protein [Staphylococcus aureus O11]
gi|417890530|ref|ZP_12534603.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21200]
gi|418306580|ref|ZP_12918362.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21194]
gi|418560538|ref|ZP_13125051.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21252]
gi|418888661|ref|ZP_13442797.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418993476|ref|ZP_13541113.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|283460073|gb|EFC07163.1| tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus H19]
gi|302332474|gb|ADL22667.1| Tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus JKD6159]
gi|323438704|gb|EGA96445.1| TPR domain-containing protein [Staphylococcus aureus O11]
gi|341854665|gb|EGS95531.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21200]
gi|365246509|gb|EHM87056.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21194]
gi|371971602|gb|EHO88999.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21252]
gi|377746635|gb|EHT70605.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG290]
gi|377754171|gb|EHT78080.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1524]
Length = 479
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|345872076|ref|ZP_08824016.1| Methyltransferase type 12 [Thiorhodococcus drewsii AZ1]
gi|343919610|gb|EGV30356.1| Methyltransferase type 12 [Thiorhodococcus drewsii AZ1]
Length = 452
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 7/113 (6%)
Query: 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189
E E+ F + ++ P ++A + + +R GR ++++ + +P + + A
Sbjct: 137 DEAEQHFLQAIDLSPDFIDARNNLSRLYVRMGRTEDSIAQAMEAMKRDPGNASTREVLAY 196
Query: 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTL-------QIQSLF 235
Y G+L A +++D L++ P +ALH L + IQS+F
Sbjct: 197 AYARAGQLDDAIGIYRDWLEDEPDNPKALHHLAACTGQDVPERASDAYIQSVF 249
>gi|242823262|ref|XP_002488047.1| translation repressor/antiviral protein Ski3, putative [Talaromyces
stipitatus ATCC 10500]
gi|218712968|gb|EED12393.1| translation repressor/antiviral protein Ski3, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1417
Score = 36.6 bits (83), Expect = 9.2, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 41/80 (51%)
Query: 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190
E + +FE +L+++P+N + L + +EA F++R + +P+ ++ + A C
Sbjct: 430 EAKSIFESILKRKPKNTKCLLGIGLILEEDHDYEEAYNFLQRARERDPSNIKIRSELAWC 489
Query: 191 YELMGKLSTAKRLFKDILKE 210
L G L + +D+L E
Sbjct: 490 TALNGNLQDGLEMLQDVLSE 509
>gi|347549781|ref|YP_004856109.1| hypothetical protein LIV_2386 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346982852|emb|CBW86884.1| Hypothetical protein of unknown function [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 491
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204
R VEA R R KEA+ ++ R ++EP E A+CY +G+ + +L
Sbjct: 24 RGVEAF--------RDQRIKEAIRYLARASELEPGESVILCQLAICYTEIGQFHKSNQLL 75
Query: 205 KDILKER 211
+DIL++R
Sbjct: 76 RDILEKR 82
>gi|386830405|ref|YP_006237059.1| hypothetical protein SAEMRSA15_06890 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417798626|ref|ZP_12445786.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21310]
gi|418656256|ref|ZP_13218070.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|334275487|gb|EGL93776.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21310]
gi|375033978|gb|EHS27156.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-105]
gi|385195797|emb|CCG15406.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
HO 5096 0412]
Length = 479
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|297569320|ref|YP_003690664.1| hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925235|gb|ADH86045.1| Tetratricopeptide TPR_2 repeat protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 1335
Score = 36.6 bits (83), Expect = 9.3, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 108 ALPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEAL 167
A P + R + L A+ + E+F+ LL + P + + L ++ +R+GR EAL
Sbjct: 106 AAPYEPRYARGLATALLAVGRSARAAELFQGLLVQFPDDPDLLAGLVTALVRQGREAEAL 165
Query: 168 EFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL---KERPLLLRAL----HD 220
E+ +RL+ + + + A Y+ +G+ A+ L + P LLR D
Sbjct: 166 EYQERLVKLRGVDGDEGAELARLYQRLGRPQQARPLVNRLAGRPDAAPELLRLAAEVHED 225
Query: 221 LGR 223
LGR
Sbjct: 226 LGR 228
>gi|148654219|ref|YP_001274424.1| hypothetical protein RoseRS_0031 [Roseiflexus sp. RS-1]
gi|148566329|gb|ABQ88474.1| TPR repeat-containing protein [Roseiflexus sp. RS-1]
Length = 522
Score = 36.6 bits (83), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%)
Query: 158 MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217
+RR R A + R++ P++VE + LCY+ + + + A LF+ +L+ P ++A
Sbjct: 410 VRRNRYDLAAKEFARVLQFWPDDVETNFMLGLCYKELMEPARAIPLFEKVLRRNPRHVQA 469
Query: 218 LHDLG 222
L+ LG
Sbjct: 470 LYYLG 474
>gi|221141245|ref|ZP_03565738.1| hypothetical protein SauraJ_06343 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|304381616|ref|ZP_07364266.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|384861431|ref|YP_005744151.1| hypothetical protein SAA6008_00778 [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|384869349|ref|YP_005752063.1| hypothetical protein SAT0131_00835 [Staphylococcus aureus subsp.
aureus T0131]
gi|387142457|ref|YP_005730850.1| hypothetical protein SATW20_08380 [Staphylococcus aureus subsp.
aureus TW20]
gi|418280838|ref|ZP_12893663.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21178]
gi|418872452|ref|ZP_13426791.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|418948896|ref|ZP_13501176.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|418952697|ref|ZP_13504713.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|424784620|ref|ZP_18211430.1| TPR domain protein [Staphylococcus aureus CN79]
gi|269940340|emb|CBI48717.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TW20]
gi|302750660|gb|ADL64837.1| Tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus str. JKD6008]
gi|304339979|gb|EFM05923.1| tetratricopeptide (TPR) domain protein [Staphylococcus aureus
subsp. aureus ATCC BAA-39]
gi|329313484|gb|AEB87897.1| Tetratricopeptide TPR_2 repeat protein [Staphylococcus aureus
subsp. aureus T0131]
gi|365167409|gb|EHM58874.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21178]
gi|375367202|gb|EHS71170.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-125]
gi|375370403|gb|EHS74212.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-157]
gi|375376411|gb|EHS79946.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-189]
gi|421957219|gb|EKU09543.1| TPR domain protein [Staphylococcus aureus CN79]
Length = 479
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|160891402|ref|ZP_02072405.1| hypothetical protein BACUNI_03852 [Bacteroides uniformis ATCC 8492]
gi|423304808|ref|ZP_17282807.1| hypothetical protein HMPREF1072_01747 [Bacteroides uniformis
CL03T00C23]
gi|423310078|ref|ZP_17288062.1| hypothetical protein HMPREF1073_02812 [Bacteroides uniformis
CL03T12C37]
gi|156858809|gb|EDO52240.1| tetratricopeptide repeat protein [Bacteroides uniformis ATCC 8492]
gi|392682718|gb|EIY76060.1| hypothetical protein HMPREF1073_02812 [Bacteroides uniformis
CL03T12C37]
gi|392683472|gb|EIY76807.1| hypothetical protein HMPREF1072_01747 [Bacteroides uniformis
CL03T00C23]
Length = 616
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177
N +E+ D ++G + ++ E++ + E ++E ++ +Q + +K A ++ L++
Sbjct: 186 NRQEEYDKVIGI--LNKLEERMGKNEQLSMEKFRIYLQ----KKDDKSAFHEIESLVEEY 239
Query: 178 PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230
PN++ ++++ Y GK A ++K +L E P A++ L Y T Q
Sbjct: 240 PNDMRYQVVLGDVYMQNGKKQEAYEIYKKVLAEEPDNAMAMYSLASYYEETGQ 292
>gi|416849448|ref|ZP_11908098.1| TPR domain-containing protein [Staphylococcus aureus O46]
gi|323441292|gb|EGA98959.1| TPR domain-containing protein [Staphylococcus aureus O46]
Length = 479
Score = 36.6 bits (83), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|119628674|gb|EAX08269.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
gi|119628678|gb|EAX08273.1| intraflagellar transport 88 homolog (Chlamydomonas), isoform CRA_d
[Homo sapiens]
Length = 833
Score = 36.6 bits (83), Expect = 9.4, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 591 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 650
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 651 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 710
Query: 222 G 222
G
Sbjct: 711 G 711
>gi|88194545|ref|YP_499341.1| hypothetical protein SAOUHSC_00784 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|417650417|ref|ZP_12300188.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21189]
gi|418315294|ref|ZP_12926758.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21340]
gi|418322185|ref|ZP_12933522.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|440734244|ref|ZP_20913856.1| hypothetical protein SASA_02540 [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|87202103|gb|ABD29913.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|329723772|gb|EGG60300.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21189]
gi|365223794|gb|EHM65069.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus VCU006]
gi|365243924|gb|EHM84592.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21340]
gi|436431272|gb|ELP28625.1| hypothetical protein SASA_02540 [Staphylococcus aureus subsp.
aureus DSM 20231]
Length = 479
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|87161140|ref|YP_493448.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|161509032|ref|YP_001574691.1| hypothetical protein USA300HOU_0791 [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|258452971|ref|ZP_05700965.1| TPR domain-containing protein [Staphylococcus aureus A5948]
gi|262052695|ref|ZP_06024886.1| hypothetical protein SA930_1865 [Staphylococcus aureus 930918-3]
gi|282922060|ref|ZP_06329757.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|284023785|ref|ZP_06378183.1| TPR domain-containing protein [Staphylococcus aureus subsp. aureus
132]
gi|294850491|ref|ZP_06791220.1| hypothetical protein SKAG_02584 [Staphylococcus aureus A9754]
gi|415689260|ref|ZP_11452659.1| hypothetical TPR domain protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|418284368|ref|ZP_12897094.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21209]
gi|418318388|ref|ZP_12929793.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21232]
gi|418578662|ref|ZP_13142757.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418641082|ref|ZP_13203298.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|418647111|ref|ZP_13209190.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|418651029|ref|ZP_13213040.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|418658007|ref|ZP_13219755.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|418903038|ref|ZP_13457079.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418911440|ref|ZP_13465423.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|418925001|ref|ZP_13478904.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928086|ref|ZP_13481972.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|419775405|ref|ZP_14301344.1| anaphase-promoting complex, cyclosome, subunit 3 [Staphylococcus
aureus subsp. aureus CO-23]
gi|422744907|ref|ZP_16798862.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|422746634|ref|ZP_16800565.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|87127114|gb|ABD21628.1| TPR domain protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|160367841|gb|ABX28812.1| hypothetical TPR domain protein [Staphylococcus aureus subsp.
aureus USA300_TCH1516]
gi|257859482|gb|EEV82336.1| TPR domain-containing protein [Staphylococcus aureus A5948]
gi|259159392|gb|EEW44445.1| hypothetical protein SA930_1865 [Staphylococcus aureus 930918-3]
gi|282593718|gb|EFB98710.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|294822629|gb|EFG39069.1| hypothetical protein SKAG_02584 [Staphylococcus aureus A9754]
gi|315196440|gb|EFU26791.1| hypothetical TPR domain protein [Staphylococcus aureus subsp.
aureus CGS01]
gi|320139902|gb|EFW31763.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA131]
gi|320142007|gb|EFW33835.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus MRSA177]
gi|365173671|gb|EHM64159.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21209]
gi|365243257|gb|EHM83943.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21232]
gi|375020279|gb|EHS13820.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-24]
gi|375026841|gb|EHS20219.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-91]
gi|375030934|gb|EHS24229.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-88]
gi|375039581|gb|EHS32505.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus IS-111]
gi|377696689|gb|EHT21044.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377724818|gb|EHT48933.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG547]
gi|377737998|gb|EHT62007.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742053|gb|EHT66038.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746296|gb|EHT70267.1| anaphase-promoting complex, cyclosome, subunit 3 family protein
[Staphylococcus aureus subsp. aureus CIG2018]
gi|383970628|gb|EID86721.1| anaphase-promoting complex, cyclosome, subunit 3 [Staphylococcus
aureus subsp. aureus CO-23]
Length = 479
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|118357480|ref|XP_001011989.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89293756|gb|EAR91744.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 633
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL-LQALCYELM 194
++K+LE + AL+ + + G KEA ++ K+ + I P+ ++ + L L +E+
Sbjct: 440 YKKMLEINATSYLALQQLGYNYYQDGMIKEAKQYYKQSLQINPDNIDLQYKLGCLLHEI- 498
Query: 195 GKLSTAKRLFKDILKERPLLLRALHDLG 222
G+ + R +++ LK P ++ALH +G
Sbjct: 499 GERQESMRCYENCLKINPSYVQALHIIG 526
>gi|387779898|ref|YP_005754696.1| hypothetical protein SARLGA251_06960 [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177000|emb|CCC87464.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
LGA251]
Length = 479
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|407783796|ref|ZP_11130990.1| hypothetical protein P24_16175 [Oceanibaculum indicum P24]
gi|407199842|gb|EKE69856.1| hypothetical protein P24_16175 [Oceanibaculum indicum P24]
Length = 1103
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 45/94 (47%)
Query: 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188
++E E ++ ++LE++PRN AL + RG+ EAL V + ++ +P E
Sbjct: 43 EAEAEAIYLQILERQPRNATALHFLSLIAKDRGQLDEALALVAKALEADPRYAEAHNSAG 102
Query: 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222
++L L A F+ + + A ++LG
Sbjct: 103 TYHKLKQDLDKAVASFRRAAELKRQYAEAHYNLG 136
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 132 VEEMFEKLLEKEPRNVEAL----KVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEW-K 184
+++ FE E N + L +++ G +RRG EA +F+K++ D I P++ + K
Sbjct: 396 LDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDK 455
Query: 185 LLQALCYELMGKLSTAKRLFKDILKE 210
L+ LC++ GK A++L ++++++
Sbjct: 456 LVVGLCWQ--GKADQARKLVEELVRD 479
>gi|20197768|gb|AAM15237.1| putative TPR repeat nuclear phosphoprotein [Arabidopsis thaliana]
Length = 1115
Score = 36.6 bits (83), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 136 FEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182
FEK+LE P N E LK + + G+N++ALE++++ ++P + +
Sbjct: 390 FEKVLEVYPDNCETLKALGHLYTQLGQNEKALEYMRKATKLDPRDAQ 436
>gi|406835922|ref|ZP_11095516.1| sulfatase [Schlesneria paludicola DSM 18645]
Length = 710
Score = 36.6 bits (83), Expect = 9.8, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 47/98 (47%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
E KL+++ V A ++ R GR+ EA+E + +++ P V +L A C+
Sbjct: 475 EQLRKLVQERDDYVGAFILLGDCLSREGRHDEAVEPYRSALNLVPEVVGIRLRLAHCFTA 534
Query: 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231
G+ A+ F++I+ + P + ++ G + QI
Sbjct: 535 QGRYEEAEVQFREIVAQDPEIAQSHFQWGEVLYTLHQI 572
>gi|417904637|ref|ZP_12548459.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21269]
gi|341846543|gb|EGS87735.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21269]
Length = 479
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|126725849|ref|ZP_01741691.1| hypothetical protein RB2150_06573 [Rhodobacterales bacterium
HTCC2150]
gi|126705053|gb|EBA04144.1| hypothetical protein RB2150_06573 [Rhodobacterales bacterium
HTCC2150]
Length = 650
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%)
Query: 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191
+ +EK +E PR + R GR + ALEF K ++I PN+ A+ +
Sbjct: 213 ADRTYEKAMELAPRRADIAYNRAHALERAGRYEAALEFYKISLNINPNQASALNNIAVIH 272
Query: 192 ELMGKLSTAKRLFKDILKERP 212
++ G A+R F+ L P
Sbjct: 273 KMQGNKKEARRSFESALTIAP 293
>gi|15220436|ref|NP_172007.1| Calcium-binding tetratricopeptide family protein [Arabidopsis
thaliana]
gi|75318061|sp|O23052.1|Y1515_ARATH RecName: Full=Uncharacterized TPR repeat-containing protein
At1g05150
gi|2388582|gb|AAB71463.1| Contains similarity to Rattus O-GlcNAc transferase (gb|U76557)
[Arabidopsis thaliana]
gi|332189674|gb|AEE27795.1| Calcium-binding tetratricopeptide family protein [Arabidopsis
thaliana]
Length = 808
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 127 MGKSE-VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185
MG+ E E+F++ ++ +P +V+AL + M GR + A E R++ + PN +L
Sbjct: 391 MGEDERAIEVFQRAIDLKPGHVDALYNLGGLYMDLGRFQRASEMYTRVLTVWPNHWRAQL 450
Query: 186 LQALCYELMGKLSTAKRLFKDILK 209
+A+ G+ AKR K+ LK
Sbjct: 451 NKAVSLLGAGETEEAKRALKEALK 474
>gi|417896537|ref|ZP_12540483.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21235]
gi|341840503|gb|EGS82006.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21235]
Length = 479
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|386728530|ref|YP_006194913.1| hypothetical protein ST398NM01_0839 [Staphylococcus aureus subsp.
aureus 71193]
gi|387602118|ref|YP_005733639.1| TPR domain protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478163|ref|YP_006709593.1| hypothetical protein C248_0850 [Staphylococcus aureus 08BA02176]
gi|418309561|ref|ZP_12921115.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21331]
gi|418979241|ref|ZP_13527038.1| Tetratricopeptide repeat family protein [Staphylococcus aureus
subsp. aureus DR10]
gi|283470056|emb|CAQ49267.1| TPR domain protein [Staphylococcus aureus subsp. aureus ST398]
gi|365238894|gb|EHM79722.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21331]
gi|379992920|gb|EIA14369.1| Tetratricopeptide repeat family protein [Staphylococcus aureus
subsp. aureus DR10]
gi|384229823|gb|AFH69070.1| Tetratricopeptide repeat family protein [Staphylococcus aureus
subsp. aureus 71193]
gi|404439652|gb|AFR72845.1| hypothetical protein C248_0850 [Staphylococcus aureus 08BA02176]
Length = 479
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
>gi|428207123|ref|YP_007091476.1| hypothetical protein Chro_2100 [Chroococcidiopsis thermalis PCC
7203]
gi|428009044|gb|AFY87607.1| hypothetical protein Chro_2100 [Chroococcidiopsis thermalis PCC
7203]
Length = 466
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%)
Query: 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193
+ +E+LL+ +P N +AL + +++G+ A+ +++L+ EP +E +L A Y+L
Sbjct: 335 QAYEQLLQNDPGNFDALVELANLRIQQGQPNLAIPLMEKLVRQEPERLELQLNLAQLYKL 394
Query: 194 MGKLSTAKRLFKDIL 208
+L A+ + +L
Sbjct: 395 TEQLPKAESTYDRVL 409
>gi|410220826|gb|JAA07632.1| intraflagellar transport 88 homolog [Pan troglodytes]
Length = 833
Score = 36.2 bits (82), Expect = 9.9, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 109 LPGKMRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALE 168
+P + L E D KS+ + + + P N+E ++ + + ++A++
Sbjct: 591 IPTDPQVLSKLGELYDREGDKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQ 650
Query: 169 FVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP-------LLLRALHDL 221
+ +R I+P +V+W+L+ A C+ G A +KD ++ P L+R DL
Sbjct: 651 YFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDL 710
Query: 222 G 222
G
Sbjct: 711 G 711
>gi|418561333|ref|ZP_13125825.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21262]
gi|371977678|gb|EHO94941.1| tetratricopeptide repeat protein [Staphylococcus aureus subsp.
aureus 21262]
Length = 479
Score = 36.2 bits (82), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 129 KSEVEEMFE-KLLEKEPRNVEA----LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE- 182
+ E+++MF+ K +E +EA ++++ Q +GR K+A +V +P EV+
Sbjct: 119 RDELDQMFDVKYQSEEQIELEAQLFVVQILFQYLFSQGRLKDAKNYVLH----QPQEVQD 174
Query: 183 ---WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218
+ L A+CY +G+ TAK L++ +L+E + AL
Sbjct: 175 HRVVRNLLAMCYLYLGEYDTAKALYEALLQEDSTDIYAL 213
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,263,591,169
Number of Sequences: 23463169
Number of extensions: 122782417
Number of successful extensions: 467801
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 500
Number of HSP's that attempted gapping in prelim test: 465599
Number of HSP's gapped (non-prelim): 2626
length of query: 235
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 97
effective length of database: 9,121,278,045
effective search space: 884763970365
effective search space used: 884763970365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)