Query 026642
Match_columns 235
No_of_seqs 203 out of 2382
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 18:31:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gco_A Protein STI-1; structur 99.8 2E-18 6.8E-23 131.6 14.8 104 122-225 22-125 (126)
2 4ga2_A E3 SUMO-protein ligase 99.7 6.2E-17 2.1E-21 126.5 14.8 112 119-230 37-149 (150)
3 4ga2_A E3 SUMO-protein ligase 99.7 1.1E-17 3.7E-22 130.9 8.8 103 129-231 13-115 (150)
4 3urz_A Uncharacterized protein 99.7 9.4E-17 3.2E-21 131.6 13.7 106 124-229 15-136 (208)
5 3upv_A Heat shock protein STI1 99.7 3.1E-16 1.1E-20 117.4 15.3 107 122-228 13-125 (126)
6 2pl2_A Hypothetical conserved 99.7 2.2E-16 7.7E-21 130.1 15.0 113 119-232 45-168 (217)
7 4gyw_A UDP-N-acetylglucosamine 99.7 1.8E-16 6.2E-21 153.9 16.1 113 119-231 49-161 (723)
8 3gyz_A Chaperone protein IPGC; 99.7 2.5E-17 8.7E-22 130.2 7.9 98 118-215 41-138 (151)
9 3gyz_A Chaperone protein IPGC; 99.7 5.6E-16 1.9E-20 122.4 15.3 105 129-233 18-122 (151)
10 3sz7_A HSC70 cochaperone (SGT) 99.7 5E-16 1.7E-20 121.8 14.7 105 121-225 19-123 (164)
11 2lni_A Stress-induced-phosphop 99.7 8.9E-16 3E-20 113.9 14.9 111 119-229 22-132 (133)
12 4gco_A Protein STI-1; structur 99.7 1.5E-16 5.2E-21 121.1 10.4 96 138-233 4-99 (126)
13 2vyi_A SGTA protein; chaperone 99.7 5.8E-15 2E-19 108.5 17.1 108 124-231 23-130 (131)
14 2pl2_A Hypothetical conserved 99.7 1.4E-15 4.8E-20 125.3 15.3 106 127-233 98-203 (217)
15 4gyw_A UDP-N-acetylglucosamine 99.7 1.9E-15 6.5E-20 146.7 17.4 121 113-233 9-129 (723)
16 1hxi_A PEX5, peroxisome target 99.7 9.9E-16 3.4E-20 115.6 12.0 96 121-216 25-120 (121)
17 2vgx_A Chaperone SYCD; alterna 99.7 2.3E-15 8E-20 117.4 14.5 98 120-217 28-125 (148)
18 2xcb_A PCRH, regulatory protei 99.7 1.9E-15 6.5E-20 116.2 13.7 100 120-219 25-124 (142)
19 1elw_A TPR1-domain of HOP; HOP 99.7 8.7E-15 3E-19 105.9 16.1 104 123-226 14-117 (118)
20 3rkv_A Putative peptidylprolyl 99.6 3.9E-15 1.3E-19 116.4 14.2 109 122-230 20-147 (162)
21 2vgx_A Chaperone SYCD; alterna 99.6 9.5E-16 3.3E-20 119.7 10.4 101 133-233 7-107 (148)
22 1na0_A Designed protein CTPR3; 99.6 3E-14 1E-18 103.8 17.0 107 122-228 18-124 (125)
23 2h6f_A Protein farnesyltransfe 99.6 3.4E-15 1.2E-19 134.7 14.4 104 127-230 111-215 (382)
24 3q49_B STIP1 homology and U bo 99.6 1.1E-14 3.8E-19 109.5 14.7 112 119-230 15-131 (137)
25 1zu2_A Mitochondrial import re 99.6 2.8E-15 9.7E-20 119.6 11.4 96 129-224 18-134 (158)
26 2dba_A Smooth muscle cell asso 99.6 3E-14 1E-18 107.7 16.4 108 121-228 36-146 (148)
27 3k9i_A BH0479 protein; putativ 99.6 1.5E-15 5.1E-20 113.0 8.8 93 127-219 4-99 (117)
28 2xcb_A PCRH, regulatory protei 99.6 1.3E-15 4.4E-20 117.2 8.5 100 134-233 5-104 (142)
29 3vtx_A MAMA; tetratricopeptide 99.6 3E-14 1E-18 112.8 16.7 106 128-233 54-159 (184)
30 4i17_A Hypothetical protein; T 99.6 2.2E-14 7.6E-19 117.5 16.4 112 121-232 15-134 (228)
31 3vtx_A MAMA; tetratricopeptide 99.6 4.4E-14 1.5E-18 111.8 17.2 93 123-215 83-175 (184)
32 2xev_A YBGF; tetratricopeptide 99.6 6.1E-14 2.1E-18 104.3 17.0 105 122-226 11-121 (129)
33 2hr2_A Hypothetical protein; a 99.6 2E-15 6.9E-20 120.6 9.2 105 123-227 21-148 (159)
34 1p5q_A FKBP52, FK506-binding p 99.6 1.9E-14 6.5E-19 126.8 16.4 109 124-232 158-281 (336)
35 1a17_A Serine/threonine protei 99.6 5E-14 1.7E-18 108.5 16.7 107 124-230 24-132 (166)
36 2fbn_A 70 kDa peptidylprolyl i 99.6 3.2E-14 1.1E-18 114.7 16.1 108 124-231 49-172 (198)
37 2h6f_A Protein farnesyltransfe 99.6 9.6E-15 3.3E-19 131.7 13.8 108 120-227 138-246 (382)
38 2e2e_A Formate-dependent nitri 99.6 6.5E-15 2.2E-19 116.3 10.6 105 128-232 25-132 (177)
39 4i17_A Hypothetical protein; T 99.6 1.8E-14 6E-19 118.1 13.4 113 119-231 48-169 (228)
40 4gcn_A Protein STI-1; structur 99.6 2.5E-14 8.6E-19 108.6 12.8 95 120-214 15-116 (127)
41 2fo7_A Synthetic consensus TPR 99.6 1.5E-13 5.1E-18 100.8 15.9 108 125-232 13-120 (136)
42 2kat_A Uncharacterized protein 99.6 4.9E-14 1.7E-18 103.9 12.3 99 131-229 3-103 (115)
43 3upv_A Heat shock protein STI1 99.6 3.7E-14 1.3E-18 106.0 11.5 90 144-233 1-90 (126)
44 3as5_A MAMA; tetratricopeptide 99.6 2.8E-13 9.7E-18 105.0 16.9 115 118-232 47-161 (186)
45 1elr_A TPR2A-domain of HOP; HO 99.5 1.9E-13 6.6E-18 100.4 14.5 108 123-231 14-128 (131)
46 3qou_A Protein YBBN; thioredox 99.5 9.8E-14 3.4E-18 119.3 14.3 114 119-232 123-272 (287)
47 1wao_1 Serine/threonine protei 99.5 1.2E-13 4E-18 127.7 14.8 107 126-232 19-127 (477)
48 1kt0_A FKBP51, 51 kDa FK506-bi 99.5 9.6E-14 3.3E-18 127.4 14.1 109 123-231 278-401 (457)
49 2pzi_A Probable serine/threoni 99.5 3.7E-14 1.3E-18 136.2 11.8 113 120-233 440-552 (681)
50 2kck_A TPR repeat; tetratricop 99.5 2.3E-13 8E-18 97.5 13.2 96 119-214 12-110 (112)
51 2q7f_A YRRB protein; TPR, prot 99.5 4.9E-13 1.7E-17 108.9 16.3 109 123-231 101-209 (243)
52 2vsy_A XCC0866; transferase, g 99.5 2.5E-13 8.6E-18 126.6 16.5 110 119-228 29-138 (568)
53 2q7f_A YRRB protein; TPR, prot 99.5 6.6E-13 2.3E-17 108.1 16.8 114 119-232 63-176 (243)
54 1ihg_A Cyclophilin 40; ppiase 99.5 1.7E-13 5.9E-18 122.7 13.9 110 122-231 232-357 (370)
55 4eqf_A PEX5-related protein; a 99.5 1.9E-13 6.4E-18 119.0 13.7 105 128-232 192-298 (365)
56 3uq3_A Heat shock protein STI1 99.5 3.6E-13 1.2E-17 110.2 14.4 105 129-233 121-225 (258)
57 3sz7_A HSC70 cochaperone (SGT) 99.5 1.5E-13 5.3E-18 107.5 11.6 91 143-233 7-97 (164)
58 3as5_A MAMA; tetratricopeptide 99.5 3.4E-13 1.1E-17 104.6 13.5 109 124-232 19-127 (186)
59 2r5s_A Uncharacterized protein 99.5 2E-13 6.8E-18 108.3 12.3 109 124-232 17-161 (176)
60 3q49_B STIP1 homology and U bo 99.5 3.4E-13 1.1E-17 101.2 13.0 92 141-232 3-94 (137)
61 4gcn_A Protein STI-1; structur 99.5 1.4E-13 4.7E-18 104.5 10.4 88 145-232 6-100 (127)
62 1na3_A Designed protein CTPR2; 99.5 3.5E-13 1.2E-17 94.1 11.7 85 144-228 6-90 (91)
63 2pzi_A Probable serine/threoni 99.5 1.5E-13 5E-18 132.1 13.0 109 124-232 402-518 (681)
64 2vsy_A XCC0866; transferase, g 99.5 1.4E-13 4.9E-18 128.3 12.4 107 127-233 3-109 (568)
65 1fch_A Peroxisomal targeting s 99.5 6.2E-13 2.1E-17 115.1 15.5 102 129-230 197-300 (368)
66 4abn_A Tetratricopeptide repea 99.5 2.6E-13 9E-18 124.8 13.9 106 127-232 193-309 (474)
67 3qky_A Outer membrane assembly 99.5 3.5E-13 1.2E-17 112.9 13.4 114 119-232 21-165 (261)
68 1xnf_A Lipoprotein NLPI; TPR, 99.5 1.2E-13 4.3E-18 114.5 10.4 105 120-224 50-154 (275)
69 4abn_A Tetratricopeptide repea 99.5 2.1E-13 7.1E-18 125.5 12.7 106 122-228 111-226 (474)
70 1hxi_A PEX5, peroxisome target 99.5 3.5E-13 1.2E-17 101.5 11.8 86 148-233 18-103 (121)
71 2ho1_A Type 4 fimbrial biogene 99.5 1.1E-12 3.8E-17 107.9 15.8 114 119-232 77-192 (252)
72 1w3b_A UDP-N-acetylglucosamine 99.5 8.5E-13 2.9E-17 116.0 16.0 103 128-230 218-320 (388)
73 2kck_A TPR repeat; tetratricop 99.5 1.4E-13 4.8E-18 98.7 9.0 90 143-232 2-94 (112)
74 1w3b_A UDP-N-acetylglucosamine 99.5 9.7E-13 3.3E-17 115.6 16.2 108 124-231 44-151 (388)
75 1hh8_A P67PHOX, NCF-2, neutrop 99.5 5.7E-13 2E-17 107.3 13.6 107 124-233 17-139 (213)
76 2l6j_A TPR repeat-containing p 99.5 3.3E-13 1.1E-17 97.5 10.9 87 146-232 3-95 (111)
77 2vq2_A PILW, putative fimbrial 99.5 9.3E-13 3.2E-17 105.6 14.4 113 120-232 49-164 (225)
78 3ma5_A Tetratricopeptide repea 99.5 2.5E-13 8.5E-18 98.7 9.8 89 142-230 2-92 (100)
79 1xnf_A Lipoprotein NLPI; TPR, 99.5 2.1E-12 7.1E-17 107.1 16.7 103 129-231 21-127 (275)
80 2vq2_A PILW, putative fimbrial 99.5 1.7E-12 5.8E-17 104.0 15.5 114 119-232 82-199 (225)
81 3u4t_A TPR repeat-containing p 99.5 5.2E-13 1.8E-17 111.0 12.7 103 127-230 17-123 (272)
82 1fch_A Peroxisomal targeting s 99.5 1.8E-12 6.2E-17 112.1 16.5 96 120-215 224-319 (368)
83 3cv0_A Peroxisome targeting si 99.5 1.6E-12 5.6E-17 110.0 15.9 111 122-232 181-303 (327)
84 2e2e_A Formate-dependent nitri 99.5 1.6E-12 5.3E-17 102.4 14.6 98 120-217 51-151 (177)
85 2ho1_A Type 4 fimbrial biogene 99.5 8.9E-13 3E-17 108.5 13.4 106 127-232 51-158 (252)
86 3urz_A Uncharacterized protein 99.5 1.5E-12 5.2E-17 106.3 14.7 96 119-214 60-190 (208)
87 2c2l_A CHIP, carboxy terminus 99.5 2.5E-13 8.7E-18 116.5 10.1 94 121-214 12-105 (281)
88 3hym_B Cell division cycle pro 99.4 1.9E-12 6.5E-17 109.7 15.4 106 125-230 68-174 (330)
89 4eqf_A PEX5-related protein; a 99.4 2.4E-12 8.3E-17 112.0 16.3 97 118-214 70-166 (365)
90 3hym_B Cell division cycle pro 99.4 1.6E-12 5.4E-17 110.2 14.8 114 119-232 96-210 (330)
91 3mkr_A Coatomer subunit epsilo 99.4 2.4E-12 8.1E-17 111.1 15.9 113 119-231 136-250 (291)
92 3uq3_A Heat shock protein STI1 99.4 2.2E-12 7.4E-17 105.5 14.5 104 121-224 147-256 (258)
93 3cv0_A Peroxisome targeting si 99.4 2.7E-12 9.2E-17 108.6 15.3 106 128-233 153-258 (327)
94 3u4t_A TPR repeat-containing p 99.4 1.9E-12 6.6E-17 107.5 14.0 113 118-230 79-191 (272)
95 1hh8_A P67PHOX, NCF-2, neutrop 99.4 3.6E-12 1.2E-16 102.6 14.7 108 119-226 43-166 (213)
96 3ieg_A DNAJ homolog subfamily 99.4 2.9E-12 9.9E-17 109.4 14.2 102 121-222 11-115 (359)
97 2if4_A ATFKBP42; FKBP-like, al 99.4 3.4E-13 1.2E-17 119.0 8.0 102 126-227 192-310 (338)
98 2lni_A Stress-induced-phosphop 99.4 1.8E-12 6.3E-17 95.7 10.7 90 143-232 12-101 (133)
99 3qky_A Outer membrane assembly 99.4 4E-12 1.4E-16 106.4 13.9 111 118-228 57-198 (261)
100 1p5q_A FKBP52, FK506-binding p 99.4 2.8E-13 9.6E-18 119.3 6.0 105 129-233 129-248 (336)
101 2yhc_A BAMD, UPF0169 lipoprote 99.4 3E-12 1E-16 105.5 11.8 97 122-218 13-133 (225)
102 2yhc_A BAMD, UPF0169 lipoprote 99.4 5E-12 1.7E-16 104.2 13.0 115 119-233 47-202 (225)
103 1elw_A TPR1-domain of HOP; HOP 99.4 6.3E-12 2.1E-16 90.5 11.9 87 146-232 3-89 (118)
104 3ieg_A DNAJ homolog subfamily 99.4 1E-11 3.6E-16 105.9 15.1 103 127-229 51-168 (359)
105 2hr2_A Hypothetical protein; a 99.4 3.2E-12 1.1E-16 102.0 10.9 87 147-233 11-120 (159)
106 2fo7_A Synthetic consensus TPR 99.4 2.1E-11 7.3E-16 89.1 14.2 94 121-214 43-136 (136)
107 2dba_A Smooth muscle cell asso 99.4 5.9E-12 2E-16 94.9 11.4 91 142-232 23-116 (148)
108 3mkr_A Coatomer subunit epsilo 99.4 1E-11 3.5E-16 107.1 14.4 94 126-219 179-273 (291)
109 3fp2_A TPR repeat-containing p 99.4 6.5E-12 2.2E-16 114.0 13.8 107 126-232 289-395 (537)
110 2xpi_A Anaphase-promoting comp 99.4 1.3E-11 4.6E-16 113.8 16.1 112 121-232 381-492 (597)
111 2vyi_A SGTA protein; chaperone 99.4 3.8E-12 1.3E-16 93.2 10.0 91 142-232 7-97 (131)
112 2y4t_A DNAJ homolog subfamily 99.4 9.6E-12 3.3E-16 110.6 14.5 104 120-223 33-139 (450)
113 3rkv_A Putative peptidylprolyl 99.4 3.5E-12 1.2E-16 99.5 10.1 88 146-233 10-115 (162)
114 2y4t_A DNAJ homolog subfamily 99.3 3.2E-11 1.1E-15 107.2 16.9 115 119-233 66-195 (450)
115 1na0_A Designed protein CTPR3; 99.3 1.9E-11 6.4E-16 88.7 12.7 90 143-232 4-94 (125)
116 2xpi_A Anaphase-promoting comp 99.3 2.8E-11 9.7E-16 111.6 16.5 111 122-232 450-567 (597)
117 2xev_A YBGF; tetratricopeptide 99.3 8.4E-12 2.9E-16 92.5 10.2 86 148-233 3-94 (129)
118 2c2l_A CHIP, carboxy terminus 99.3 8.8E-12 3E-16 106.8 11.6 90 144-233 1-90 (281)
119 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 6.4E-13 2.2E-17 121.8 4.1 105 129-233 250-369 (457)
120 2fbn_A 70 kDa peptidylprolyl i 99.3 1.5E-12 5.2E-17 104.8 5.6 92 141-232 32-139 (198)
121 2ond_A Cleavage stimulation fa 99.3 1.3E-11 4.6E-16 106.3 11.9 95 130-224 81-177 (308)
122 1elr_A TPR2A-domain of HOP; HO 99.3 9.4E-12 3.2E-16 91.2 9.2 88 145-232 2-96 (131)
123 1a17_A Serine/threonine protei 99.3 3.9E-11 1.3E-15 92.0 12.5 88 146-233 12-99 (166)
124 2ond_A Cleavage stimulation fa 99.3 3.7E-11 1.3E-15 103.5 13.5 114 118-231 104-219 (308)
125 3fp2_A TPR repeat-containing p 99.3 3.2E-11 1.1E-15 109.4 13.6 110 122-232 252-361 (537)
126 3edt_B KLC 2, kinesin light ch 99.3 1.8E-11 6.1E-16 101.0 9.3 114 119-232 49-186 (283)
127 2gw1_A Mitochondrial precursor 99.3 3E-11 1E-15 108.7 11.4 103 128-230 353-464 (514)
128 1qqe_A Vesicular transport pro 99.3 3.6E-11 1.2E-15 103.0 11.4 110 123-232 87-216 (292)
129 2l6j_A TPR repeat-containing p 99.2 3.3E-12 1.1E-16 92.1 3.9 86 122-207 13-104 (111)
130 2kc7_A BFR218_protein; tetratr 99.2 9.2E-11 3.2E-15 83.5 11.1 68 151-218 4-72 (99)
131 2gw1_A Mitochondrial precursor 99.2 5.5E-11 1.9E-15 106.9 10.6 100 128-227 319-424 (514)
132 1ouv_A Conserved hypothetical 99.2 5.2E-10 1.8E-14 93.7 15.9 96 126-227 55-158 (273)
133 2kc7_A BFR218_protein; tetratr 99.2 4E-11 1.4E-15 85.4 7.3 83 124-214 11-94 (99)
134 3edt_B KLC 2, kinesin light ch 99.2 7.5E-11 2.6E-15 97.2 9.8 92 119-210 91-198 (283)
135 1qqe_A Vesicular transport pro 99.2 6E-11 2.1E-15 101.7 9.1 108 125-232 49-175 (292)
136 4g1t_A Interferon-induced prot 99.2 7.5E-10 2.6E-14 99.2 16.3 109 121-229 59-186 (472)
137 2r5s_A Uncharacterized protein 99.2 1.7E-10 5.9E-15 91.2 10.4 80 130-209 91-172 (176)
138 4a1s_A PINS, partner of inscut 99.2 1.8E-10 6.1E-15 101.3 11.2 110 121-230 56-181 (411)
139 4g1t_A Interferon-induced prot 99.2 3.7E-10 1.3E-14 101.2 13.5 99 130-228 192-294 (472)
140 2qfc_A PLCR protein; TPR, HTH, 99.1 3.4E-10 1.2E-14 96.6 12.4 108 125-232 127-253 (293)
141 1na3_A Designed protein CTPR2; 99.1 7.2E-10 2.5E-14 76.8 11.9 74 122-195 18-91 (91)
142 1dce_A Protein (RAB geranylger 99.1 4.5E-10 1.5E-14 106.1 14.2 99 130-228 46-156 (567)
143 3bee_A Putative YFRE protein; 99.1 2.8E-10 9.7E-15 82.5 10.0 72 143-214 2-76 (93)
144 3qou_A Protein YBBN; thioredox 99.1 3.7E-10 1.3E-14 96.8 12.4 91 143-233 113-237 (287)
145 3k9i_A BH0479 protein; putativ 99.1 2.5E-11 8.7E-16 89.8 4.0 75 159-233 2-79 (117)
146 3dra_A Protein farnesyltransfe 99.1 9.4E-10 3.2E-14 96.4 14.1 100 130-229 50-158 (306)
147 1ouv_A Conserved hypothetical 99.1 3.3E-09 1.1E-13 88.7 16.0 96 126-227 91-194 (273)
148 1pc2_A Mitochondria fission pr 99.1 1.1E-09 3.8E-14 86.5 12.2 98 129-226 14-116 (152)
149 3nf1_A KLC 1, kinesin light ch 99.1 2.1E-10 7.3E-15 96.1 8.6 114 119-232 75-212 (311)
150 3nf1_A KLC 1, kinesin light ch 99.1 2.9E-10 9.8E-15 95.3 9.3 113 120-232 34-170 (311)
151 3ro2_A PINS homolog, G-protein 99.1 7E-10 2.4E-14 93.1 10.8 107 124-230 16-138 (338)
152 3u3w_A Transcriptional activat 99.1 3.7E-10 1.3E-14 96.4 9.2 105 126-230 128-251 (293)
153 3sf4_A G-protein-signaling mod 99.1 1.1E-09 3.6E-14 95.3 12.0 111 120-230 16-142 (406)
154 1ihg_A Cyclophilin 40; ppiase 99.1 3.4E-10 1.2E-14 101.2 9.0 87 147-233 223-325 (370)
155 2if4_A ATFKBP42; FKBP-like, al 99.1 1.1E-10 3.6E-15 102.9 5.5 91 143-233 175-282 (338)
156 1dce_A Protein (RAB geranylger 99.1 1.2E-09 4.1E-14 103.1 13.0 100 129-228 89-191 (567)
157 3ulq_A Response regulator aspa 99.1 5.6E-10 1.9E-14 98.3 9.9 112 121-232 151-281 (383)
158 3ro3_A PINS homolog, G-protein 99.0 5.9E-10 2E-14 83.9 8.2 107 126-232 22-146 (164)
159 3rjv_A Putative SEL1 repeat pr 99.0 1.3E-09 4.4E-14 89.2 10.6 98 128-228 68-175 (212)
160 3dra_A Protein farnesyltransfe 99.0 3.4E-09 1.2E-13 92.8 13.9 104 127-230 124-235 (306)
161 3gw4_A Uncharacterized protein 99.0 9.8E-10 3.4E-14 87.0 9.2 112 121-232 34-164 (203)
162 2qfc_A PLCR protein; TPR, HTH, 99.0 1E-08 3.6E-13 87.3 16.1 111 123-233 85-214 (293)
163 2v5f_A Prolyl 4-hydroxylase su 99.0 5.7E-09 1.9E-13 76.4 12.2 80 146-225 4-90 (104)
164 1wao_1 Serine/threonine protei 99.0 9.3E-11 3.2E-15 108.2 2.8 88 146-233 5-92 (477)
165 2ooe_A Cleavage stimulation fa 99.0 2.7E-09 9.4E-14 98.3 12.7 101 130-230 255-371 (530)
166 3q7a_A Farnesyltransferase alp 99.0 6.7E-09 2.3E-13 92.6 14.1 102 129-230 70-174 (349)
167 3gw4_A Uncharacterized protein 99.0 1.6E-09 5.4E-14 85.8 9.1 107 126-232 5-124 (203)
168 2kat_A Uncharacterized protein 99.0 1.2E-09 4E-14 80.1 7.6 69 164-232 2-70 (115)
169 3ulq_A Response regulator aspa 99.0 5.7E-10 1.9E-14 98.2 7.0 108 125-232 115-241 (383)
170 2ifu_A Gamma-SNAP; membrane fu 99.0 1.2E-09 4.2E-14 94.1 8.9 84 128-212 91-186 (307)
171 1zu2_A Mitochondrial import re 99.0 7E-10 2.4E-14 88.3 6.6 72 158-229 13-94 (158)
172 3dss_A Geranylgeranyl transfer 99.0 1.8E-08 6.1E-13 89.3 15.7 100 129-228 90-192 (331)
173 3sf4_A G-protein-signaling mod 99.0 1.4E-09 4.9E-14 94.5 8.4 107 126-232 200-324 (406)
174 2ooe_A Cleavage stimulation fa 99.0 7.2E-09 2.5E-13 95.5 13.5 113 119-231 327-441 (530)
175 3rjv_A Putative SEL1 repeat pr 99.0 2.1E-09 7.2E-14 87.9 8.8 98 125-227 30-137 (212)
176 3u3w_A Transcriptional activat 98.9 3.5E-09 1.2E-13 90.2 9.9 113 121-233 83-214 (293)
177 3dss_A Geranylgeranyl transfer 98.9 2E-08 6.9E-13 88.9 14.9 102 129-230 46-159 (331)
178 4a1s_A PINS, partner of inscut 98.9 1.9E-09 6.3E-14 94.8 7.3 111 123-233 233-361 (411)
179 4f3v_A ESX-1 secretion system 98.9 1.7E-09 5.8E-14 93.8 6.6 111 119-230 108-223 (282)
180 3q15_A PSP28, response regulat 98.9 4.1E-09 1.4E-13 92.8 9.0 112 122-233 150-279 (378)
181 2ifu_A Gamma-SNAP; membrane fu 98.9 8.1E-09 2.8E-13 88.9 10.6 98 127-225 129-243 (307)
182 3ro2_A PINS homolog, G-protein 98.9 2.7E-09 9.3E-14 89.4 7.1 108 125-232 195-320 (338)
183 3q7a_A Farnesyltransferase alp 98.9 1.2E-08 4.1E-13 91.0 11.6 103 128-230 104-216 (349)
184 2xm6_A Protein corresponding t 98.8 4.7E-08 1.6E-12 89.1 14.6 96 126-227 56-159 (490)
185 1klx_A Cysteine rich protein B 98.8 3.2E-08 1.1E-12 75.9 11.3 91 129-227 11-105 (138)
186 3q15_A PSP28, response regulat 98.8 2.1E-08 7.2E-13 88.2 11.0 111 119-229 188-314 (378)
187 1klx_A Cysteine rich protein B 98.8 1E-07 3.6E-12 73.0 13.3 90 127-222 39-136 (138)
188 3ly7_A Transcriptional activat 98.8 8.9E-08 3E-12 85.8 13.5 87 129-216 215-345 (372)
189 4f3v_A ESX-1 secretion system 98.8 3.4E-08 1.2E-12 85.5 10.4 100 122-222 144-248 (282)
190 3n71_A Histone lysine methyltr 98.8 5.2E-08 1.8E-12 90.5 11.9 104 123-226 319-446 (490)
191 3ma5_A Tetratricopeptide repea 98.7 5.4E-08 1.9E-12 70.0 9.1 76 119-194 13-90 (100)
192 3ro3_A PINS homolog, G-protein 98.7 7.8E-08 2.7E-12 72.0 10.1 92 122-213 58-161 (164)
193 1hz4_A MALT regulatory protein 98.7 7.5E-08 2.6E-12 83.8 10.8 110 123-232 63-191 (373)
194 3qww_A SET and MYND domain-con 98.7 4.3E-08 1.5E-12 89.7 9.5 92 126-217 311-423 (433)
195 3u64_A Protein TP_0956; tetrat 98.7 5.7E-08 2E-12 84.3 9.4 84 130-213 180-272 (301)
196 2xm6_A Protein corresponding t 98.7 2.4E-07 8E-12 84.5 13.9 95 127-227 310-411 (490)
197 1hz4_A MALT regulatory protein 98.7 5.4E-08 1.8E-12 84.8 9.2 107 126-232 27-152 (373)
198 3e4b_A ALGK; tetratricopeptide 98.6 1.3E-07 4.3E-12 86.2 10.6 91 128-227 232-330 (452)
199 1nzn_A CGI-135 protein, fissio 98.6 5.5E-07 1.9E-11 68.8 11.9 93 129-221 17-114 (126)
200 3qwp_A SET and MYND domain-con 98.6 2.9E-07 9.9E-12 84.0 11.5 104 122-225 296-423 (429)
201 3bee_A Putative YFRE protein; 98.6 4.3E-07 1.5E-11 65.5 9.5 54 129-182 25-78 (93)
202 3e4b_A ALGK; tetratricopeptide 98.5 5.9E-07 2E-11 81.8 12.3 95 128-227 194-295 (452)
203 4b4t_Q 26S proteasome regulato 98.4 1.3E-06 4.3E-11 77.2 11.2 109 123-231 14-191 (434)
204 3mv2_B Coatomer subunit epsilo 98.4 6.1E-07 2.1E-11 78.7 8.7 82 132-213 85-168 (310)
205 2v5f_A Prolyl 4-hydroxylase su 98.4 4.1E-06 1.4E-10 60.9 10.6 69 121-189 13-88 (104)
206 3mv2_B Coatomer subunit epsilo 98.3 3.2E-06 1.1E-10 74.1 10.5 103 118-220 105-219 (310)
207 3u64_A Protein TP_0956; tetrat 98.3 2.4E-06 8.4E-11 74.1 9.0 87 142-228 147-252 (301)
208 1b89_A Protein (clathrin heavy 98.2 5.1E-06 1.8E-10 76.1 9.1 93 128-229 163-255 (449)
209 1xi4_A Clathrin heavy chain; a 98.2 7.9E-06 2.7E-10 83.7 10.7 89 129-229 1092-1181(1630)
210 4b4t_Q 26S proteasome regulato 98.1 4.9E-06 1.7E-10 73.4 8.2 105 126-230 108-231 (434)
211 1pc2_A Mitochondria fission pr 98.1 9.2E-06 3.1E-10 64.0 7.7 63 129-191 51-115 (152)
212 1xi4_A Clathrin heavy chain; a 98.0 2.5E-05 8.6E-10 80.1 11.9 103 119-229 1201-1328(1630)
213 3n71_A Histone lysine methyltr 98.0 1.2E-05 4.1E-10 74.5 8.8 97 115-211 353-465 (490)
214 4e6h_A MRNA 3'-END-processing 98.0 4.9E-05 1.7E-09 73.2 11.9 80 131-210 327-407 (679)
215 3ffl_A Anaphase-promoting comp 98.0 4E-05 1.4E-09 61.0 9.1 108 118-226 25-166 (167)
216 3o48_A Mitochondria fission 1 97.9 0.00012 4E-09 56.2 10.9 88 131-219 25-116 (134)
217 1y8m_A FIS1; mitochondria, unk 97.9 0.00048 1.6E-08 53.4 14.1 86 132-218 25-114 (144)
218 3ly7_A Transcriptional activat 97.8 0.0002 6.8E-09 64.1 12.8 96 136-232 183-327 (372)
219 3qww_A SET and MYND domain-con 97.8 3.5E-05 1.2E-09 70.3 7.3 75 159-233 310-400 (433)
220 4e6h_A MRNA 3'-END-processing 97.8 0.0002 7E-09 68.9 12.3 97 130-226 49-150 (679)
221 3qwp_A SET and MYND domain-con 97.7 9.7E-05 3.3E-09 67.2 9.1 80 154-233 294-389 (429)
222 1b89_A Protein (clathrin heavy 97.7 5.7E-06 2E-10 75.8 -0.2 92 128-230 18-109 (449)
223 1nzn_A CGI-135 protein, fissio 97.5 0.00027 9.3E-09 53.7 6.6 62 130-191 55-118 (126)
224 3o48_A Mitochondria fission 1 97.4 0.00069 2.4E-08 51.9 8.0 63 130-192 60-123 (134)
225 1y8m_A FIS1; mitochondria, unk 97.3 0.0013 4.4E-08 51.0 8.6 62 130-191 59-121 (144)
226 1zbp_A Hypothetical protein VP 97.2 0.0051 1.8E-07 52.5 12.0 91 124-214 8-133 (273)
227 1zbp_A Hypothetical protein VP 97.1 0.0026 8.9E-08 54.4 9.5 72 156-227 6-80 (273)
228 4h7y_A Dual specificity protei 97.1 0.0021 7.3E-08 50.4 8.0 88 130-218 36-131 (161)
229 2ff4_A Probable regulatory pro 97.0 0.0065 2.2E-07 54.3 12.0 84 126-209 128-233 (388)
230 4g26_A Pentatricopeptide repea 97.0 0.013 4.6E-07 54.0 14.3 80 130-209 87-168 (501)
231 2uy1_A Cleavage stimulation fa 96.8 0.016 5.5E-07 53.3 12.8 57 130-187 196-252 (493)
232 2uy1_A Cleavage stimulation fa 96.7 0.019 6.5E-07 52.7 12.5 93 127-224 300-393 (493)
233 4h7y_A Dual specificity protei 96.6 0.026 8.9E-07 44.2 10.7 57 127-183 74-130 (161)
234 1ya0_A SMG-7 transcript varian 96.5 0.013 4.3E-07 54.4 10.2 81 149-229 154-234 (497)
235 4gns_B Protein CSD3, chitin bi 96.5 0.0085 2.9E-07 58.2 9.1 59 149-207 339-397 (754)
236 4g26_A Pentatricopeptide repea 96.4 0.084 2.9E-06 48.6 14.7 93 118-210 110-204 (501)
237 3ffl_A Anaphase-promoting comp 96.3 0.012 4.3E-07 46.6 7.6 85 149-233 22-140 (167)
238 4gns_B Protein CSD3, chitin bi 95.4 0.074 2.5E-06 51.6 10.2 103 129-232 265-388 (754)
239 3mkq_B Coatomer subunit alpha; 95.1 0.22 7.5E-06 39.8 10.3 78 124-206 16-114 (177)
240 2ff4_A Probable regulatory pro 94.9 0.24 8.1E-06 44.0 11.4 79 154-232 122-222 (388)
241 3mkq_A Coatomer beta'-subunit; 94.8 0.17 5.7E-06 47.8 10.5 42 127-173 666-707 (814)
242 3kae_A CDC27, possible protein 93.7 0.7 2.4E-05 37.1 10.2 87 123-214 43-147 (242)
243 1ya0_A SMG-7 transcript varian 92.9 0.64 2.2E-05 42.9 10.3 67 127-193 166-232 (497)
244 4b4t_S RPN3, 26S proteasome re 92.6 0.16 5.6E-06 47.1 5.8 67 146-214 230-303 (523)
245 3spa_A Mtrpol, DNA-directed RN 92.4 2.2 7.6E-05 42.9 13.9 94 117-211 131-231 (1134)
246 4b4t_P 26S proteasome regulato 90.7 4.1 0.00014 36.6 13.0 92 119-210 143-247 (445)
247 4b4t_R RPN7, 26S proteasome re 90.0 0.78 2.7E-05 41.2 7.5 64 147-210 131-197 (429)
248 4b4t_R RPN7, 26S proteasome re 89.9 2.3 7.7E-05 38.1 10.5 90 125-214 143-241 (429)
249 1qsa_A Protein (soluble lytic 89.7 1.4 4.7E-05 41.7 9.3 80 129-209 268-347 (618)
250 3mkq_A Coatomer beta'-subunit; 89.6 0.69 2.3E-05 43.6 7.2 48 155-207 660-707 (814)
251 3mkq_B Coatomer subunit alpha; 89.5 1.5 5.3E-05 34.8 8.0 54 146-207 7-60 (177)
252 3kae_A CDC27, possible protein 88.9 2 6.7E-05 34.5 8.1 86 142-232 28-131 (242)
253 3spa_A Mtrpol, DNA-directed RN 88.9 3.5 0.00012 41.5 11.7 83 147-230 127-215 (1134)
254 4b4t_P 26S proteasome regulato 87.7 4.6 0.00016 36.3 11.0 61 148-208 138-204 (445)
255 2cfu_A SDSA1; SDS-hydrolase, l 86.4 2.2 7.4E-05 40.6 8.3 51 147-197 449-499 (658)
256 3txn_A 26S proteasome regulato 86.1 1.9 6.6E-05 38.5 7.4 61 151-211 103-169 (394)
257 3txn_A 26S proteasome regulato 85.6 9 0.00031 34.1 11.5 91 122-212 108-212 (394)
258 3t5v_B Nuclear mRNA export pro 83.4 2.7 9.3E-05 38.3 7.2 86 129-214 142-254 (455)
259 3t5x_A PCI domain-containing p 83.0 2.9 9.9E-05 33.7 6.6 52 147-198 14-70 (203)
260 4fhn_B Nucleoporin NUP120; pro 82.4 9.2 0.00031 38.5 11.3 76 139-214 834-932 (1139)
261 2w2u_A Hypothetical P60 katani 82.1 1.9 6.6E-05 29.8 4.5 32 129-175 16-47 (83)
262 2v6y_A AAA family ATPase, P60 81.5 2.1 7.1E-05 29.5 4.5 31 130-175 9-39 (83)
263 1wfd_A Hypothetical protein 15 81.4 6 0.00021 27.7 7.0 56 129-199 12-74 (93)
264 1wy6_A Hypothetical protein ST 80.1 15 0.00052 28.3 9.1 64 148-211 92-155 (172)
265 2v6x_A Vacuolar protein sortin 78.1 9.2 0.00032 26.1 7.0 32 129-175 10-41 (85)
266 2crb_A Nuclear receptor bindin 78.1 3.7 0.00013 29.1 4.8 29 147-175 15-43 (97)
267 4gq2_M Nucleoporin NUP120; bet 76.1 14 0.00048 36.5 10.2 79 137-215 830-932 (950)
268 3t5x_A PCI domain-containing p 75.3 7.1 0.00024 31.3 6.6 75 125-207 26-108 (203)
269 3lpz_A GET4 (YOR164C homolog); 71.4 36 0.0012 29.5 10.5 67 143-209 132-215 (336)
270 2cpt_A SKD1 protein, vacuolar 71.0 4.8 0.00017 29.6 4.2 32 129-175 15-46 (117)
271 4gq2_M Nucleoporin NUP120; bet 70.0 9.6 0.00033 37.7 7.3 53 152-208 815-867 (950)
272 3ax2_A Mitochondrial import re 69.2 14 0.00048 24.8 5.8 33 151-183 21-53 (73)
273 2rpa_A Katanin P60 ATPase-cont 69.2 4.6 0.00016 27.6 3.4 27 150-176 15-41 (78)
274 1qsa_A Protein (soluble lytic 69.1 46 0.0016 31.2 11.5 103 128-231 229-335 (618)
275 1wy6_A Hypothetical protein ST 68.1 34 0.0012 26.3 8.4 52 126-177 104-155 (172)
276 3lew_A SUSD-like carbohydrate 67.9 16 0.00055 33.1 7.9 31 181-211 203-233 (495)
277 4a5x_A MITD1, MIT domain-conta 67.4 27 0.00093 23.9 7.3 18 158-175 27-44 (86)
278 2w2u_A Hypothetical P60 katani 67.0 20 0.00069 24.4 6.5 59 163-229 16-76 (83)
279 2crb_A Nuclear receptor bindin 66.3 11 0.00038 26.6 4.9 28 181-208 15-42 (97)
280 2p58_C Putative type III secre 66.1 28 0.00095 25.2 7.1 72 130-207 24-95 (116)
281 2wpv_A GET4, UPF0363 protein Y 65.5 15 0.0005 31.7 6.7 66 145-210 132-217 (312)
282 3myv_A SUSD superfamily protei 64.9 14 0.00048 33.1 6.8 30 181-210 190-219 (454)
283 2ijq_A Hypothetical protein; s 63.3 50 0.0017 25.5 9.4 59 151-209 36-103 (161)
284 3ax2_A Mitochondrial import re 62.9 21 0.00072 23.9 5.7 34 185-218 21-54 (73)
285 3kez_A Putative sugar binding 62.8 19 0.00065 32.2 7.3 30 181-210 196-225 (461)
286 2v6y_A AAA family ATPase, P60 62.7 31 0.0011 23.4 6.8 58 164-229 9-68 (83)
287 3esl_A Checkpoint serine/threo 62.5 59 0.002 26.1 14.3 85 134-219 58-153 (202)
288 2yhe_A SEC-alkyl sulfatase; hy 66.0 1.6 5.6E-05 41.6 0.0 52 148-199 462-513 (668)
289 4fhn_B Nucleoporin NUP120; pro 61.8 14 0.00049 37.1 6.9 54 150-207 815-868 (1139)
290 2cfu_A SDSA1; SDS-hydrolase, l 60.0 43 0.0015 31.6 9.5 53 180-232 448-500 (658)
291 2uwj_G Type III export protein 58.4 28 0.00097 25.1 6.0 72 130-207 23-94 (115)
292 3mcx_A SUSD superfamily protei 56.5 21 0.00071 32.1 6.4 31 181-211 202-232 (477)
293 4b4t_O 26S proteasome regulato 54.2 83 0.0028 27.5 9.8 64 147-210 127-198 (393)
294 3lew_A SUSD-like carbohydrate 52.4 39 0.0013 30.5 7.6 32 146-177 202-233 (495)
295 3bu8_A Telomeric repeat-bindin 51.8 65 0.0022 26.4 7.8 63 152-214 119-190 (235)
296 3snx_A SUSD homolog, putative 51.8 25 0.00086 31.5 6.1 32 180-211 190-221 (460)
297 3bu8_A Telomeric repeat-bindin 50.9 54 0.0018 26.8 7.2 69 163-231 88-164 (235)
298 3hdx_A SUSD homolog, SUSD supe 50.5 33 0.0011 30.8 6.7 30 181-210 197-226 (478)
299 4aez_C MAD3, mitotic spindle c 50.3 1E+02 0.0035 25.1 11.4 56 164-219 131-188 (223)
300 3myv_A SUSD superfamily protei 49.8 37 0.0013 30.3 6.9 47 130-176 165-219 (454)
301 1om2_A Protein (mitochondrial 47.8 20 0.00068 25.4 3.7 27 187-213 26-52 (95)
302 4b4t_S RPN3, 26S proteasome re 47.7 24 0.00083 32.6 5.3 53 126-180 244-303 (523)
303 3kez_A Putative sugar binding 47.3 48 0.0017 29.5 7.3 32 145-176 194-225 (461)
304 2rpa_A Katanin P60 ATPase-cont 46.7 20 0.00067 24.4 3.5 27 184-210 15-41 (78)
305 1om2_A Protein (mitochondrial 46.3 26 0.00087 24.8 4.1 31 151-181 24-54 (95)
306 2dl1_A Spartin; SPG20, MIT, st 46.2 15 0.00051 27.0 3.0 58 129-209 19-82 (116)
307 4a5x_A MITD1, MIT domain-conta 43.4 43 0.0015 22.9 4.9 37 192-228 27-72 (86)
308 3jq1_A SUSD superfamily protei 43.1 21 0.00071 32.2 4.1 28 182-209 181-208 (481)
309 3qnk_A Putative lipoprotein; a 42.7 48 0.0017 30.0 6.6 30 181-210 182-211 (517)
310 3iqu_A 14-3-3 protein sigma; s 41.4 1.1E+02 0.0036 25.2 7.8 47 146-192 7-54 (236)
311 4ady_A RPN2, 26S proteasome re 41.1 1.1E+02 0.0036 30.5 9.0 74 151-227 528-608 (963)
312 2dl1_A Spartin; SPG20, MIT, st 40.6 26 0.00088 25.7 3.5 16 163-178 19-34 (116)
313 3esl_A Checkpoint serine/threo 39.7 1.2E+02 0.004 24.3 7.6 51 129-179 95-147 (202)
314 1wfd_A Hypothetical protein 15 39.7 42 0.0014 23.2 4.4 44 163-214 12-55 (93)
315 3ubw_A 14-3-3E, 14-3-3 protein 39.4 1.1E+02 0.0037 25.6 7.6 46 146-191 30-76 (261)
316 2v6x_A Vacuolar protein sortin 39.2 55 0.0019 22.0 4.9 50 163-227 10-68 (85)
317 2o8p_A 14-3-3 domain containin 38.7 1.6E+02 0.0054 24.0 9.9 74 159-232 137-225 (227)
318 2br9_A 14-3-3E, 14-3-3 protein 38.7 1E+02 0.0035 25.2 7.3 45 147-191 5-50 (234)
319 4b4t_O 26S proteasome regulato 38.6 75 0.0026 27.8 7.0 56 154-209 83-155 (393)
320 3uzd_A 14-3-3 protein gamma; s 37.9 1.2E+02 0.004 25.1 7.6 46 147-192 4-50 (248)
321 2ijq_A Hypothetical protein; s 37.6 1E+02 0.0036 23.7 6.8 51 125-175 44-103 (161)
322 3t5v_B Nuclear mRNA export pro 37.4 56 0.0019 29.5 6.0 34 147-180 220-254 (455)
323 3mcx_A SUSD superfamily protei 36.7 64 0.0022 28.8 6.3 48 130-177 177-232 (477)
324 3u84_A Menin; MLL, JUND, ledgf 36.6 1.7E+02 0.0057 26.5 8.7 92 132-223 233-366 (550)
325 3i4g_A SUSD-like carbohydrate 36.5 69 0.0024 29.2 6.6 30 181-210 198-227 (528)
326 3re2_A Predicted protein; meni 36.4 1.8E+02 0.0061 25.9 8.7 44 166-209 276-324 (472)
327 3ph0_C ASCG; type III secretio 36.4 83 0.0028 20.0 5.6 39 162-201 21-60 (61)
328 2cpt_A SKD1 protein, vacuolar 36.1 55 0.0019 23.7 4.8 50 163-227 15-74 (117)
329 3hdx_A SUSD homolog, SUSD supe 35.2 81 0.0028 28.1 6.8 30 147-176 197-226 (478)
330 3fap_B FRAP, FKBP12-rapamycin 35.1 69 0.0024 22.4 4.9 74 150-226 13-91 (94)
331 2npu_A FKBP12-rapamycin comple 34.9 62 0.0021 23.9 4.9 76 150-228 43-123 (126)
332 2yin_A DOCK2, dedicator of cyt 34.2 1.9E+02 0.0065 25.7 9.0 82 148-229 36-147 (436)
333 2wpv_A GET4, UPF0363 protein Y 34.0 2.2E+02 0.0074 24.2 12.6 27 179-205 132-158 (312)
334 4a1g_A Mitotic checkpoint seri 33.7 1.6E+02 0.0053 22.4 12.6 58 164-221 82-141 (152)
335 1g1e_B SIN3A; four-helix bundl 33.5 1.2E+02 0.0039 20.8 7.9 28 163-190 10-37 (89)
336 3bqo_A Telomeric repeat-bindin 33.4 20 0.00069 28.9 2.1 35 190-224 126-160 (211)
337 1o9d_A 14-3-3-like protein C; 32.8 1.3E+02 0.0045 25.0 7.1 44 148-191 9-55 (260)
338 2br9_A 14-3-3E, 14-3-3 protein 32.5 1.5E+02 0.0052 24.2 7.4 46 164-209 147-201 (234)
339 3otn_A SUSD superfamily protei 32.4 44 0.0015 30.0 4.5 30 181-210 188-226 (482)
340 3lxu_X Tripeptidyl-peptidase 2 32.4 1.5E+02 0.0052 30.6 8.7 61 165-226 1267-1328(1354)
341 3bqo_A Telomeric repeat-bindin 32.4 28 0.00096 28.1 2.8 45 152-196 122-166 (211)
342 2npm_A 14-3-3 domain containin 32.0 1.4E+02 0.0049 24.7 7.2 45 148-192 29-77 (260)
343 2npm_A 14-3-3 domain containin 31.9 1.4E+02 0.0049 24.8 7.2 46 164-209 173-226 (260)
344 3k66_A Beta-amyloid-like prote 31.3 1.4E+02 0.0047 24.5 6.8 54 161-214 101-158 (239)
345 3qnk_A Putative lipoprotein; a 31.0 99 0.0034 27.9 6.7 31 146-176 181-211 (517)
346 3jq1_A SUSD superfamily protei 29.9 47 0.0016 29.8 4.2 31 145-175 178-208 (481)
347 4a1g_A Mitotic checkpoint seri 29.5 82 0.0028 24.0 4.9 48 132-179 84-133 (152)
348 2cwy_A Hypothetical protein TT 27.8 1.5E+02 0.0051 20.4 6.3 55 153-209 7-67 (94)
349 2v7s_A Probable conserved lipo 27.2 19 0.00066 29.2 1.0 29 114-142 44-72 (215)
350 1ixm_A SPO0B, protein (sporula 27.2 63 0.0021 25.4 4.1 43 134-176 19-61 (192)
351 3umh_A Amyloid beta A4 protein 26.9 1.1E+02 0.0039 24.6 5.5 52 130-181 102-155 (211)
352 3jys_A SUSD superfamily protei 26.7 82 0.0028 28.4 5.3 28 182-209 189-222 (499)
353 3i4g_A SUSD-like carbohydrate 26.4 1.3E+02 0.0044 27.3 6.6 31 146-176 197-227 (528)
354 3snx_A SUSD homolog, putative 26.1 54 0.0018 29.3 3.9 33 144-176 188-220 (460)
355 3uzd_A 14-3-3 protein gamma; s 25.8 2.3E+02 0.0079 23.3 7.4 46 164-209 148-202 (248)
356 3pmr_A Amyloid-like protein 1; 25.4 86 0.0029 25.5 4.5 50 130-179 109-160 (219)
357 3l22_A SUSD superfamily protei 25.3 32 0.0011 30.5 2.2 29 180-208 200-228 (441)
358 2wvi_A Mitotic checkpoint seri 24.9 1.1E+02 0.0037 23.6 4.9 34 144-177 93-126 (164)
359 2uwj_G Type III export protein 23.3 2.1E+02 0.0072 20.5 5.8 51 160-213 19-69 (115)
360 4aez_C MAD3, mitotic spindle c 23.3 1.1E+02 0.0038 24.8 4.9 48 132-179 133-182 (223)
361 2wvi_A Mitotic checkpoint seri 23.3 2.5E+02 0.0087 21.4 13.5 52 164-215 77-130 (164)
362 2p58_C Putative type III secre 22.6 2.2E+02 0.0075 20.5 7.3 52 160-214 20-71 (116)
363 3ihv_A SUSD homolog; NP_813570 22.3 1.4E+02 0.0046 27.0 5.9 29 182-210 197-233 (535)
364 2o8p_A 14-3-3 domain containin 21.8 3.2E+02 0.011 22.1 9.7 57 152-208 11-73 (227)
365 3ckc_A SUSD; TPR repeat, carbo 21.7 1.6E+02 0.0056 26.1 6.3 46 164-209 170-231 (527)
366 3otn_A SUSD superfamily protei 21.0 85 0.0029 28.1 4.2 32 145-176 186-226 (482)
367 2hz8_A De novo designed DIIRON 20.8 1.4E+02 0.0048 21.7 4.5 49 130-180 12-61 (115)
368 2yhe_A SEC-alkyl sulfatase; hy 25.9 21 0.00073 33.9 0.0 52 181-232 461-512 (668)
369 4gq4_A Menin; tumor suppressor 20.5 3.3E+02 0.011 24.6 7.6 58 166-223 283-351 (489)
370 2e2a_A Protein (enzyme IIA); h 20.4 1.1E+02 0.0038 21.7 3.9 27 181-207 20-46 (105)
371 3jys_A SUSD superfamily protei 20.3 1.2E+02 0.0043 27.2 5.1 31 145-175 186-222 (499)
372 2ehw_A Hypothetical protein TT 20.0 77 0.0026 23.1 2.9 32 159-190 53-84 (120)
No 1
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.79 E-value=2e-18 Score=131.62 Aligned_cols=104 Identities=14% Similarity=0.138 Sum_probs=99.0
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~ 201 (235)
.....+++++|++.|+++++.+|+++++|..+|.+|.+.|++++|+++++++++++|+++.+|+.+|.+|..+|++++|+
T Consensus 22 ~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~ 101 (126)
T 4gco_A 22 EYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQ 101 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHH
Confidence 33446789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHH
Q 026642 202 RLFKDILKERPLLLRALHDLGRYV 225 (235)
Q Consensus 202 ~~l~kaL~~~P~~~~a~~~l~~~~ 225 (235)
+.|+++++++|++..++.+++.++
T Consensus 102 ~~~~~al~l~P~~~~a~~~l~~~l 125 (126)
T 4gco_A 102 RAYEDALQVDPSNEEAREGVRNCL 125 (126)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHC
T ss_pred HHHHHHHHHCcCCHHHHHHHHHhc
Confidence 999999999999999999998764
No 2
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.74 E-value=6.2e-17 Score=126.52 Aligned_cols=112 Identities=9% Similarity=-0.007 Sum_probs=101.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~ 198 (235)
+..-....+++++|++.|+++++.+|+++++|..+|.+|...|++++|+.+|+++++++|+++.+++.+|.+|...|+++
T Consensus 37 la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~ 116 (150)
T 4ga2_A 37 FAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTD 116 (150)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSS
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChH
Confidence 34444556779999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHH-HHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 199 TAKRL-FKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 199 ~A~~~-l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
+|.+. ++++++++|++..++..++.++...++
T Consensus 117 ~aa~~~~~~al~l~P~~~~~~~l~~~ll~~~G~ 149 (150)
T 4ga2_A 117 GRAKYWVERAAKLFPGSPAVYKLKEQLLDCEGE 149 (150)
T ss_dssp SHHHHHHHHHHHHSTTCHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhCc
Confidence 87766 599999999999999999988887765
No 3
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.72 E-value=1.1e-17 Score=130.86 Aligned_cols=103 Identities=8% Similarity=0.020 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
.++|++.+++++..+|+++.++..+|.+|++.|+|++|+++|+++++++|+++.+|..+|.+|...|++++|+..|++++
T Consensus 13 ~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al 92 (150)
T 4ga2_A 13 VERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSV 92 (150)
T ss_dssp HHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCHHHHHHHHHHHhhchhh
Q 026642 209 KERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 209 ~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
+++|++..+++++|.+|.+.++.
T Consensus 93 ~~~p~~~~~~~~la~~~~~~~~~ 115 (150)
T 4ga2_A 93 ELNPTQKDLVLKIAELLCKNDVT 115 (150)
T ss_dssp HHCTTCHHHHHHHHHHHHHHCSS
T ss_pred HhCCCCHHHHHHHHHHHHHcCCh
Confidence 99999999999999999877654
No 4
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.71 E-value=9.4e-17 Score=131.58 Aligned_cols=106 Identities=20% Similarity=0.153 Sum_probs=101.2
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHH----------------HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKV----------------VMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~----------------la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~l 187 (235)
...+++++|+..|+++++.+|+++++|.. +|.+|.+.|++++|+.+|+++++++|+++.+++.+
T Consensus 15 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l 94 (208)
T 3urz_A 15 IEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEAC 94 (208)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 44677999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhch
Q 026642 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTL 229 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~ 229 (235)
|.+|...|++++|+..|+++++++|++..+++++|.+|...+
T Consensus 95 g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~ 136 (208)
T 3urz_A 95 AEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTA 136 (208)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999986554
No 5
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=3.1e-16 Score=117.42 Aligned_cols=107 Identities=8% Similarity=0.015 Sum_probs=100.4
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~ 201 (235)
.....+++++|++.|+++++.+|+++.+|..+|.++...|++++|+.+++++++++|+++.+++.+|.+|..+|++++|+
T Consensus 13 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~ 92 (126)
T 3upv_A 13 EYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASAL 92 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHH
Confidence 33456679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHC------CCCHHHHHHHHHHHhhc
Q 026642 202 RLFKDILKER------PLLLRALHDLGRYVSMT 228 (235)
Q Consensus 202 ~~l~kaL~~~------P~~~~a~~~l~~~~~~~ 228 (235)
+.|+++++++ |++..++..+..+..+.
T Consensus 93 ~~~~~al~~~p~~~~~p~~~~~~~~l~~~~~~l 125 (126)
T 3upv_A 93 ETLDAARTKDAEVNNGSSAREIDQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCcccCCchhHHHHHHHHHHHHHhh
Confidence 9999999999 99999999988887653
No 6
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.71 E-value=2.2e-16 Score=130.15 Aligned_cols=113 Identities=19% Similarity=0.181 Sum_probs=79.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRR-----------GRNKEALEFVKRLIDIEPNEVEWKLLQ 187 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~-----------g~~~eAi~~l~kai~l~P~~~~a~~~l 187 (235)
+.......+++++|+..|+++++.+|++++++..+|.++... |++++|+..|+++++++|+++.++..+
T Consensus 45 lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~l 124 (217)
T 2pl2_A 45 LARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYAPLHLQR 124 (217)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 333444455667777777777777777777777777777777 777777777777777777777777777
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
|.+|..+|++++|++.|+++++++ ++..++.++|.++...++..
T Consensus 125 g~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~ 168 (217)
T 2pl2_A 125 GLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLD 168 (217)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHH
Confidence 777777777777777777777777 66777777777776666543
No 7
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.70 E-value=1.8e-16 Score=153.86 Aligned_cols=113 Identities=16% Similarity=0.115 Sum_probs=72.3
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~ 198 (235)
+.......+++++|++.|+++++.+|+++++|..+|.+|.++|++++|+++|+++++++|+++++++++|.+|..+|+++
T Consensus 49 Lg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~ 128 (723)
T 4gyw_A 49 LASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIP 128 (723)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Confidence 33344445556666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 199 TAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
+|++.|+++++++|++..++.++|.++...++.
T Consensus 129 eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~ 161 (723)
T 4gyw_A 129 EAIASYRTALKLKPDFPDAYCNLAHCLQIVCDW 161 (723)
T ss_dssp HHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhCCCChHHHhhhhhHHHhcccH
Confidence 666666666666666666666666666655553
No 8
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.70 E-value=2.5e-17 Score=130.18 Aligned_cols=98 Identities=12% Similarity=0.001 Sum_probs=91.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~ 197 (235)
.+.......+++++|++.|+++++.+|+++++|..+|.+|...|++++|+++|+++++++|+++.+|+.+|.+|..+|++
T Consensus 41 ~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~ 120 (151)
T 3gyz_A 41 SYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAP 120 (151)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCH
Confidence 34445556778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCH
Q 026642 198 STAKRLFKDILKERPLLL 215 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~ 215 (235)
++|++.|+++++++|+..
T Consensus 121 ~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 121 LKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HHHHHHHHHHHHHCCCHH
T ss_pred HHHHHHHHHHHHhCCCHH
Confidence 999999999999999874
No 9
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.69 E-value=5.6e-16 Score=122.41 Aligned_cols=105 Identities=11% Similarity=0.065 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
..++...++++++.+|+++++++.+|..+.+.|++++|+++|+++++++|+++.+|..+|.+|..+|++++|++.|++++
T Consensus 18 ~~~~~~~l~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al 97 (151)
T 3gyz_A 18 AINSGATLKDINAIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAF 97 (151)
T ss_dssp HHHTSCCTGGGCCSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHCCCCHHHHhCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 34455678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 209 KERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 209 ~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+++|+++.+|+++|.+|.+.++..+
T Consensus 98 ~l~P~~~~~~~~lg~~~~~lg~~~e 122 (151)
T 3gyz_A 98 ALGKNDYTPVFHTGQCQLRLKAPLK 122 (151)
T ss_dssp HHSSSCCHHHHHHHHHHHHTTCHHH
T ss_pred hhCCCCcHHHHHHHHHHHHcCCHHH
Confidence 9999999999999999999887543
No 10
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.69 E-value=5e-16 Score=121.80 Aligned_cols=105 Identities=14% Similarity=0.022 Sum_probs=96.4
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A 200 (235)
......+++++|++.|+++++.+|+++.+|..+|.+|...|++++|+.+|+++++++|+++.+|+.+|.+|..+|++++|
T Consensus 19 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A 98 (164)
T 3sz7_A 19 NAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGA 98 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHH
Confidence 34445677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHH
Q 026642 201 KRLFKDILKERPLLLRALHDLGRYV 225 (235)
Q Consensus 201 ~~~l~kaL~~~P~~~~a~~~l~~~~ 225 (235)
++.|+++++++|++..+++..++..
T Consensus 99 ~~~~~~al~~~p~~~~~~~~~~l~~ 123 (164)
T 3sz7_A 99 KEAYEKGIEAEGNGGSDAMKRGLET 123 (164)
T ss_dssp HHHHHHHHHHHSSSCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHH
Confidence 9999999999999977665555553
No 11
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.69 E-value=8.9e-16 Score=113.93 Aligned_cols=111 Identities=12% Similarity=0.083 Sum_probs=103.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~ 198 (235)
........+++++|++.|+++++.+|++.+++..+|.++...|++++|+++++++++.+|++..+++.+|.++...|+++
T Consensus 22 ~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~ 101 (133)
T 2lni_A 22 KGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYT 101 (133)
T ss_dssp HHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHH
Confidence 33344456778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHhhch
Q 026642 199 TAKRLFKDILKERPLLLRALHDLGRYVSMTL 229 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~ 229 (235)
+|++.|+++++.+|++..++..++.++.+.+
T Consensus 102 ~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 102 KAMDVYQKALDLDSSCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHHHHHCGGGTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCchHHHHHHHHHHHHhc
Confidence 9999999999999999999999999987654
No 12
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.68 E-value=1.5e-16 Score=121.10 Aligned_cols=96 Identities=9% Similarity=0.101 Sum_probs=89.5
Q ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHH
Q 026642 138 KLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRA 217 (235)
Q Consensus 138 ~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a 217 (235)
++..+||+.++++..+|..|++.|+|++|+++|+++++++|+++.+|..+|.+|..+|++++|++.|+++++++|++..+
T Consensus 4 r~a~inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a 83 (126)
T 4gco_A 4 RLAYINPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKG 83 (126)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHH
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchhhcc
Q 026642 218 LHDLGRYVSMTLQIQS 233 (235)
Q Consensus 218 ~~~l~~~~~~~~~~~~ 233 (235)
|+++|.++.+.++.++
T Consensus 84 ~~~lg~~~~~~~~~~~ 99 (126)
T 4gco_A 84 YIRKAACLVAMREWSK 99 (126)
T ss_dssp HHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHCCCHHH
Confidence 9999999999887543
No 13
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.67 E-value=5.8e-15 Score=108.53 Aligned_cols=108 Identities=16% Similarity=0.052 Sum_probs=102.6
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
...+++++|++.|+++++.+|+++.++..+|.++...|++++|+++++++++.+|+++.+++.+|.++...|++++|++.
T Consensus 23 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 102 (131)
T 2vyi_A 23 MKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAY 102 (131)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 204 FKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
|+++++.+|++..++..++.++.+.++.
T Consensus 103 ~~~~~~~~p~~~~~~~~l~~~~~~~~~~ 130 (131)
T 2vyi_A 103 YKKALELDPDNETYKSNLKIAELKLREA 130 (131)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999887653
No 14
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.67 E-value=1.4e-15 Score=125.31 Aligned_cols=106 Identities=15% Similarity=0.077 Sum_probs=97.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKD 206 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~k 206 (235)
+++++|+..|+++++.+|+++++|..+|.++...|++++|+.+|+++++++ +++.+++.+|.+|..+|++++|+..|++
T Consensus 98 g~~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~~ 176 (217)
T 2pl2_A 98 GYLEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DTPEIRSALAELYLSMGRLDEALAQYAK 176 (217)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cchHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 448999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 207 ILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 207 aL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+++.+|++..++.+++.++.+.++.++
T Consensus 177 al~~~P~~~~~~~~la~~~~~~g~~~~ 203 (217)
T 2pl2_A 177 ALEQAPKDLDLRVRYASALLLKGKAEE 203 (217)
T ss_dssp HHHHSTTCHHHHHHHHHHHTC------
T ss_pred HHHhCCCChHHHHHHHHHHHHccCHHH
Confidence 999999999999999999998887654
No 15
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.66 E-value=1.9e-15 Score=146.69 Aligned_cols=121 Identities=18% Similarity=0.146 Sum_probs=112.2
Q ss_pred ccchHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 026642 113 MRASENLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYE 192 (235)
Q Consensus 113 ~~~~~~~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~ 192 (235)
..+...+.......+++++|++.|+++++.+|+++++|..+|.+|.++|++++|+++|+++++++|+++++++++|.+|.
T Consensus 9 a~al~nLG~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~ 88 (723)
T 4gyw_A 9 ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLK 88 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 33444556666677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 193 LMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 193 ~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
.+|++++|++.|+++++++|++..+|.++|.+|.+.++.++
T Consensus 89 ~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~e 129 (723)
T 4gyw_A 89 EMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPE 129 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 99999999999999999999999999999999999887544
No 16
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.66 E-value=9.9e-16 Score=115.62 Aligned_cols=96 Identities=16% Similarity=0.136 Sum_probs=85.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A 200 (235)
......+++++|+..|+++++.+|+++++|..+|.++...|++++|+.+|+++++++|+++.+++.+|.+|...|++++|
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A 104 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAA 104 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 34445677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCHH
Q 026642 201 KRLFKDILKERPLLLR 216 (235)
Q Consensus 201 ~~~l~kaL~~~P~~~~ 216 (235)
+..|+++++.+|++..
T Consensus 105 ~~~~~~al~~~P~~~~ 120 (121)
T 1hxi_A 105 LASLRAWLLSQPQYEQ 120 (121)
T ss_dssp HHHHHHHHC-------
T ss_pred HHHHHHHHHhCcCCCC
Confidence 9999999999998753
No 17
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.66 E-value=2.3e-15 Score=117.44 Aligned_cols=98 Identities=10% Similarity=-0.036 Sum_probs=91.2
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.......+++++|+..|+++++.+|+++++|..+|.++...|++++|+++|+++++++|+++.+++.+|.+|..+|++++
T Consensus 28 g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~ 107 (148)
T 2vgx_A 28 AFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAE 107 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHH
Confidence 33445567799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHH
Q 026642 200 AKRLFKDILKERPLLLRA 217 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~~a 217 (235)
|++.|+++++++|+++..
T Consensus 108 A~~~~~~al~~~p~~~~~ 125 (148)
T 2vgx_A 108 AESGLFLAQELIANXPEF 125 (148)
T ss_dssp HHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHCcCCCcc
Confidence 999999999999987543
No 18
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.66 E-value=1.9e-15 Score=116.20 Aligned_cols=100 Identities=13% Similarity=0.024 Sum_probs=92.4
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.......+++++|+..|+++++.+|+++.+|..+|.++...|++++|+.+|+++++++|+++.+++.+|.+|..+|++++
T Consensus 25 a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~ 104 (142)
T 2xcb_A 25 GFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDG 104 (142)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHH
Confidence 33445567799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHHHH
Q 026642 200 AKRLFKDILKERPLLLRALH 219 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~~a~~ 219 (235)
|++.|+++++++|++.....
T Consensus 105 A~~~~~~al~~~p~~~~~~~ 124 (142)
T 2xcb_A 105 AESGFYSARALAAAQPAHEA 124 (142)
T ss_dssp HHHHHHHHHHHHHTCGGGHH
T ss_pred HHHHHHHHHHhCCCCcchHH
Confidence 99999999999998854443
No 19
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.65 E-value=8.7e-15 Score=105.85 Aligned_cols=104 Identities=14% Similarity=0.162 Sum_probs=98.7
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~ 202 (235)
....+++++|+..|+++++.+|+++.++..+|.++...|++++|+.+++++++.+|+++.++..+|.++...|++++|.+
T Consensus 14 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 93 (118)
T 1elw_A 14 ALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKR 93 (118)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHH
Confidence 34466799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHh
Q 026642 203 LFKDILKERPLLLRALHDLGRYVS 226 (235)
Q Consensus 203 ~l~kaL~~~P~~~~a~~~l~~~~~ 226 (235)
.|+++++.+|++..++..++.+..
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~~~ 117 (118)
T 1elw_A 94 TYEEGLKHEANNPQLKEGLQNMEA 117 (118)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHhhc
Confidence 999999999999999999988754
No 20
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.64 E-value=3.9e-15 Score=116.43 Aligned_cols=109 Identities=15% Similarity=0.103 Sum_probs=98.2
Q ss_pred HHHhcCCHHHHHHHHHHHHHh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEK------------------EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~------------------~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a 183 (235)
.....+++++|+..|+++++. +|.+..+|..+|.+|.+.|+|++|+.+++++++++|+++.+
T Consensus 20 ~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a 99 (162)
T 3rkv_A 20 ELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKA 99 (162)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHH
Confidence 334466799999999999999 77888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHhhchh
Q 026642 184 KLLQALCYELMGKLSTAKRLFKDILKERPLLL-RALHDLGRYVSMTLQ 230 (235)
Q Consensus 184 ~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~-~a~~~l~~~~~~~~~ 230 (235)
++.+|.+|..+|++++|+..|+++++++|++. .+...+..+..+..+
T Consensus 100 ~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~ 147 (162)
T 3rkv_A 100 LFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAE 147 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998 666777776655443
No 21
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.64 E-value=9.5e-16 Score=119.69 Aligned_cols=101 Identities=13% Similarity=0.072 Sum_probs=95.9
Q ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Q 026642 133 EEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERP 212 (235)
Q Consensus 133 ~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P 212 (235)
...|+++++.+|++.+++..+|..+...|++++|+..|+++++++|+++.+|+.+|.+|...|++++|++.|+++++++|
T Consensus 7 ~~~~~~al~~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p 86 (148)
T 2vgx_A 7 GGTIAMLNEISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDI 86 (148)
T ss_dssp CCSHHHHTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST
T ss_pred hhhHHHHHcCCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhchhhcc
Q 026642 213 LLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 213 ~~~~a~~~l~~~~~~~~~~~~ 233 (235)
++..+++++|.+|...++.++
T Consensus 87 ~~~~~~~~lg~~~~~~g~~~~ 107 (148)
T 2vgx_A 87 XEPRFPFHAAECLLQXGELAE 107 (148)
T ss_dssp TCTHHHHHHHHHHHHTTCHHH
T ss_pred CCchHHHHHHHHHHHcCCHHH
Confidence 999999999999998887543
No 22
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.63 E-value=3e-14 Score=103.82 Aligned_cols=107 Identities=22% Similarity=0.286 Sum_probs=100.8
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~ 201 (235)
.....+++++|++.|+++++.+|++..++..+|.++...|++++|+.+++++++.+|++...+..+|.++...|++++|+
T Consensus 18 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~ 97 (125)
T 1na0_A 18 AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAI 97 (125)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHH
Confidence 33445679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHhhc
Q 026642 202 RLFKDILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 202 ~~l~kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
..|+++++.+|++..++.+++.++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~l~~~~~~~ 124 (125)
T 1na0_A 98 EYYQKALELDPNNAEAKQNLGNAKQKQ 124 (125)
T ss_dssp HHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHhc
Confidence 999999999999999999999988654
No 23
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.63 E-value=3.4e-15 Score=134.66 Aligned_cols=104 Identities=11% Similarity=0.063 Sum_probs=58.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGR-NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~-~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
+.+++|++.|+++++.+|++.++|..+|.++...|+ +++|+.+|+++++++|+++.+|+.+|.++..+|++++|+..|+
T Consensus 111 g~~~~Al~~~~~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~ 190 (382)
T 2h6f_A 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIA 190 (382)
T ss_dssp CCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred CChHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 345555555555555555555555555555555554 5555555555555555555555555555555555555555555
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 206 DILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
++++++|++..+|+++|.++.+.++
T Consensus 191 kal~ldP~~~~a~~~lg~~~~~~g~ 215 (382)
T 2h6f_A 191 DILNQDAKNYHAWQHRQWVIQEFKL 215 (382)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHhCccCHHHHHHHHHHHHHcCC
Confidence 5555555555555555555554443
No 24
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.63 E-value=1.1e-14 Score=109.50 Aligned_cols=112 Identities=9% Similarity=0.005 Sum_probs=101.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~ 198 (235)
........+++++|+..|+++++.+|+++.+|..+|.++...|++++|+.+++++++++|+++.+++.+|.+|..+|+++
T Consensus 15 ~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~ 94 (137)
T 3q49_B 15 QGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYD 94 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHH
Confidence 34444556779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCC-----CHHHHHHHHHHHhhchh
Q 026642 199 TAKRLFKDILKERPL-----LLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~-----~~~a~~~l~~~~~~~~~ 230 (235)
+|++.|+++++.+|+ +..+...+..+..+...
T Consensus 95 ~A~~~~~~a~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 131 (137)
T 3q49_B 95 EAIANLQRAYSLAKEQRLNFGDDIPSALRIAKKKRWN 131 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998 67777777777665544
No 25
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.62 E-value=2.8e-15 Score=119.62 Aligned_cols=96 Identities=16% Similarity=0.170 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC---
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN----------KEALEFVKRLIDIEPNEVEWKLLQALCYELMG--- 195 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~----------~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g--- 195 (235)
+++|++.++++++.+|+++++|..+|.++...+++ ++|+..|+++|+++|++.++|+++|.+|..+|
T Consensus 18 feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~ 97 (158)
T 1zu2_A 18 FEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLT 97 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccC
Confidence 89999999999999999999999999999998875 59999999999999999999999999999885
Q ss_pred --------CHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q 026642 196 --------KLSTAKRLFKDILKERPLLLRALHDLGRY 224 (235)
Q Consensus 196 --------~~~~A~~~l~kaL~~~P~~~~a~~~l~~~ 224 (235)
++++|+++|+++++++|++..+...+.++
T Consensus 98 P~~~~a~g~~~eA~~~~~kAl~l~P~~~~y~~al~~~ 134 (158)
T 1zu2_A 98 PDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMT 134 (158)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred cchhhhhccHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 89999999999999999998777766654
No 26
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=3e-14 Score=107.66 Aligned_cols=108 Identities=9% Similarity=0.006 Sum_probs=100.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRN---VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~---~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~ 197 (235)
......+++++|++.|+++++.+|++ ..++..+|.+|...|++++|+++++++++++|+++.+++.+|.+|..+|++
T Consensus 36 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 115 (148)
T 2dba_A 36 NELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRL 115 (148)
T ss_dssp HHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCH
Confidence 34445677999999999999999998 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhhc
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
++|++.|+++++.+|++..++..++.+..+.
T Consensus 116 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 146 (148)
T 2dba_A 116 DQAVLDLQRCVSLEPKNKVFQEALRNISGPS 146 (148)
T ss_dssp HHHHHHHHHHHHHCSSCHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHhhc
Confidence 9999999999999999999999888876543
No 27
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.61 E-value=1.5e-15 Score=113.02 Aligned_cols=93 Identities=13% Similarity=0.082 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEK---EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~---~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
+++++|+..|+++++. +|+++.++..+|.+|...|++++|+++++++++++|+++.+++.+|.+|..+|++++|++.
T Consensus 4 g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 83 (117)
T 3k9i_A 4 GLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVEL 83 (117)
T ss_dssp ---CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHH
Confidence 4578899999999999 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCHHHHH
Q 026642 204 FKDILKERPLLLRALH 219 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~ 219 (235)
|+++++.+|++..+..
T Consensus 84 ~~~al~~~p~~~~~~~ 99 (117)
T 3k9i_A 84 LLKIIAETSDDETIQS 99 (117)
T ss_dssp HHHHHHHHCCCHHHHH
T ss_pred HHHHHHhCCCcHHHHH
Confidence 9999999999966554
No 28
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.61 E-value=1.3e-15 Score=117.17 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=92.5
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Q 026642 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL 213 (235)
Q Consensus 134 ~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~ 213 (235)
..|+++++.+|++.+++..+|..+++.|++++|+..|+++++.+|+++.+|+.+|.+|..+|++++|+..|+++++++|+
T Consensus 5 ~~l~~al~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 84 (142)
T 2xcb_A 5 GTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDIN 84 (142)
T ss_dssp ----CCTTCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred hhHHHHHcCCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 56788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhchhhcc
Q 026642 214 LLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 214 ~~~a~~~l~~~~~~~~~~~~ 233 (235)
+..+++++|.++...++..+
T Consensus 85 ~~~~~~~lg~~~~~~g~~~~ 104 (142)
T 2xcb_A 85 EPRFPFHAAECHLQLGDLDG 104 (142)
T ss_dssp CTHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHHHHHHHHHcCCHHH
Confidence 99999999999998887543
No 29
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.61 E-value=3e-14 Score=112.77 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=75.1
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
++++|+..+++++..+|++..++..+|..+...+++++|++.++++++++|++..++..+|.+|..+|++++|++.|+++
T Consensus 54 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~ 133 (184)
T 3vtx_A 54 LPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKT 133 (184)
T ss_dssp CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 34444444444444444444444444444444555555666667777777778888888999999999999999999999
Q ss_pred HHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 208 LKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 208 L~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
++.+|++..+++++|.+|.+.++.++
T Consensus 134 l~~~p~~~~~~~~lg~~~~~~g~~~~ 159 (184)
T 3vtx_A 134 ISIKPGFIRAYQSIGLAYEGKGLRDE 159 (184)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHhcchhhhHHHHHHHHHHHCCCHHH
Confidence 99999999999999999888877543
No 30
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.61 E-value=2.2e-14 Score=117.48 Aligned_cols=112 Identities=12% Similarity=-0.018 Sum_probs=103.2
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEP-RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P-~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
......+++++|++.|+++++.+| .+..++..+|.++...|++++|+++++++++++|++..++..+|.+|..+|++++
T Consensus 15 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~ 94 (228)
T 4i17_A 15 NDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQE 94 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHH
Confidence 334456779999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCH-------HHHHHHHHHHhhchhhc
Q 026642 200 AKRLFKDILKERPLLL-------RALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~-------~a~~~l~~~~~~~~~~~ 232 (235)
|++.|+++++.+|++. .++.++|.++.+.++.+
T Consensus 95 A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 134 (228)
T 4i17_A 95 YIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIE 134 (228)
T ss_dssp HHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHH
Confidence 9999999999999998 66888888888777644
No 31
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.61 E-value=4.4e-14 Score=111.76 Aligned_cols=93 Identities=17% Similarity=0.146 Sum_probs=67.8
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~ 202 (235)
.....++++|++.++++++.+|++.+++..+|.+|.+.|++++|+++|+++++++|+++.++..+|.+|..+|++++|++
T Consensus 83 ~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~ 162 (184)
T 3vtx_A 83 NFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVK 162 (184)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHH
Confidence 33345567777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHCCCCH
Q 026642 203 LFKDILKERPLLL 215 (235)
Q Consensus 203 ~l~kaL~~~P~~~ 215 (235)
.|+++++.+|+++
T Consensus 163 ~~~~al~~~p~~a 175 (184)
T 3vtx_A 163 YFKKALEKEEKKA 175 (184)
T ss_dssp HHHHHHHTTHHHH
T ss_pred HHHHHHhCCccCH
Confidence 7777777777654
No 32
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.61 E-value=6.1e-14 Score=104.29 Aligned_cols=105 Identities=18% Similarity=0.078 Sum_probs=95.8
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcC
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNV---EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE---VEWKLLQALCYELMG 195 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~---~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~---~~a~~~lA~~~~~~g 195 (235)
.....+++++|++.|+++++.+|++. +++..+|.++...|++++|+.+|+++++.+|++ +.+++.+|.+|..+|
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g 90 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEG 90 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcC
Confidence 34456679999999999999999999 899999999999999999999999999999999 899999999999999
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHh
Q 026642 196 KLSTAKRLFKDILKERPLLLRALHDLGRYVS 226 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~ 226 (235)
++++|++.|+++++.+|++..+......+..
T Consensus 91 ~~~~A~~~~~~~~~~~p~~~~~~~a~~~l~~ 121 (129)
T 2xev_A 91 KNTEAQQTLQQVATQYPGSDAARVAQERLQS 121 (129)
T ss_dssp CHHHHHHHHHHHHHHSTTSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCChHHHHHHHHHHH
Confidence 9999999999999999999777766655543
No 33
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.60 E-value=2e-15 Score=120.64 Aligned_cols=105 Identities=12% Similarity=0.045 Sum_probs=93.9
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh-------CCCCHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPR-------NVE-----ALKVVMQGNMRRGRNKEALEFVKRLIDI-------EPNEVEW 183 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~-------~~~-----a~~~la~~~~~~g~~~eAi~~l~kai~l-------~P~~~~a 183 (235)
....+++++|++.|+++++.+|+ +.. +|.++|.++...|+|++|+.+|+++|++ +|++..+
T Consensus 21 l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A 100 (159)
T 2hr2_A 21 QLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKL 100 (159)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHH
Confidence 34456799999999999999999 554 9999999999999999999999999999 9999999
Q ss_pred H----HHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 184 K----LLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 184 ~----~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
| +++|.++..+|++++|+..|+++++++|++...+-++..+..+
T Consensus 101 ~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d~~~~~~~~~~~~~ 148 (159)
T 2hr2_A 101 WISAVYSRALALDGLGRGAEAMPEFKKVVEMIEERKGETPGKERMMEV 148 (159)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCCSCCTTHHHHHHH
T ss_pred HHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999996666555555433
No 34
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.60 E-value=1.9e-14 Score=126.80 Aligned_cols=109 Identities=9% Similarity=0.002 Sum_probs=103.1
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRN---------------VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~---------------~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA 188 (235)
...+++++|+..|+++++.+|++ ..+|..+|.+|.+.|++++|+.+|+++++++|+++.+++.+|
T Consensus 158 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 237 (336)
T 1p5q_A 158 FKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRG 237 (336)
T ss_dssp HHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Confidence 34567899999999999999999 799999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 189 ~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
.+|..+|++++|+..|+++++++|++..++.+++.++.+.++..
T Consensus 238 ~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~ 281 (336)
T 1p5q_A 238 EAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQL 281 (336)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998876643
No 35
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.60 E-value=5e-14 Score=108.46 Aligned_cols=107 Identities=15% Similarity=0.094 Sum_probs=96.9
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
...+++++|+..|+++++.+|++.+++..+|.++...|++++|+++++++++++|+++.+++.+|.++..+|++++|+..
T Consensus 24 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~ 103 (166)
T 1a17_A 24 FKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRD 103 (166)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCHHHHHH--HHHHHhhchh
Q 026642 204 FKDILKERPLLLRALHD--LGRYVSMTLQ 230 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~--l~~~~~~~~~ 230 (235)
|+++++.+|++..++.. ++..+.+.++
T Consensus 104 ~~~a~~~~p~~~~~~~~~~~~~~~~~~~~ 132 (166)
T 1a17_A 104 YETVVKVKPHDKDAKMKYQECNKIVKQKA 132 (166)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999888744 4433554444
No 36
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.60 E-value=3.2e-14 Score=114.75 Aligned_cols=108 Identities=12% Similarity=0.029 Sum_probs=101.7
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNV----------------EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~----------------~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~l 187 (235)
...+++++|++.|+++++..|+++ .++..+|.++...|++++|+.+++++++++|+++.+++.+
T Consensus 49 ~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l 128 (198)
T 2fbn_A 49 FKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKL 128 (198)
T ss_dssp HHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHH
Confidence 346679999999999999999887 8999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
|.+|..+|++++|++.|+++++++|++..++..++.++.+.++.
T Consensus 129 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~ 172 (198)
T 2fbn_A 129 GVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEA 172 (198)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998776654
No 37
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.60 E-value=9.6e-15 Score=131.72 Aligned_cols=108 Identities=11% Similarity=0.056 Sum_probs=102.0
Q ss_pred HHHHHhcCC-HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 026642 120 KEKRDALMG-KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198 (235)
Q Consensus 120 ~e~~~~~~~-~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~ 198 (235)
..-....+. +++|++.|+++++.+|++..+|..+|.++...|++++|+.+|+++++++|++..+|+.+|.++..+|+++
T Consensus 138 g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~ 217 (382)
T 2h6f_A 138 RVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWD 217 (382)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCT
T ss_pred HHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChH
Confidence 334444565 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 199 TAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
+|++.|+++++++|++..+|+++|.++.+
T Consensus 218 eAl~~~~~al~l~P~~~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 218 NELQYVDQLLKEDVRNNSVWNQRYFVISN 246 (382)
T ss_dssp THHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999988
No 38
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.59 E-value=6.5e-15 Score=116.25 Aligned_cols=105 Identities=11% Similarity=0.109 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCCH--HHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC-YELMGKL--STAKRLF 204 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~-~~~~g~~--~~A~~~l 204 (235)
++++|++.++++++.+|+++++|..+|.+|...|++++|+.+|+++++++|+++.++..+|.+ +...|++ ++|+..|
T Consensus 25 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~ 104 (177)
T 2e2e_A 25 NPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMI 104 (177)
T ss_dssp --CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHH
Confidence 367777788888888888888888888888888888888888888888888888888888877 6677887 8888888
Q ss_pred HHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 205 KDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 205 ~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+++++.+|++..+++++|.+|.+.++..
T Consensus 105 ~~al~~~p~~~~~~~~la~~~~~~g~~~ 132 (177)
T 2e2e_A 105 DKALALDSNEITALMLLASDAFMQANYA 132 (177)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHcccHH
Confidence 8888888888888888887777766543
No 39
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.59 E-value=1.8e-14 Score=118.08 Aligned_cols=113 Identities=15% Similarity=0.094 Sum_probs=104.3
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV-------EWKLLQALCY 191 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~-------~a~~~lA~~~ 191 (235)
........+++++|++.|+++++.+|++..+|..+|.+|...|++++|+++++++++++|+++ .++..+|.++
T Consensus 48 ~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~ 127 (228)
T 4i17_A 48 CGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKF 127 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHH
Confidence 334445567799999999999999999999999999999999999999999999999999999 6699999999
Q ss_pred HHcCCHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHhhchhh
Q 026642 192 ELMGKLSTAKRLFKDILKERPL--LLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 192 ~~~g~~~~A~~~l~kaL~~~P~--~~~a~~~l~~~~~~~~~~ 231 (235)
..+|++++|++.|+++++.+|+ +..++.++|.+|...++.
T Consensus 128 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 128 QQAGNIEKAEENYKHATDVTSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHTTCHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999876654
No 40
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.58 E-value=2.5e-14 Score=108.61 Aligned_cols=95 Identities=13% Similarity=0.126 Sum_probs=86.5
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-------HHHHHHHHHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV-------EWKLLQALCYE 192 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~-------~a~~~lA~~~~ 192 (235)
.......+++++|++.|+++++.+|+++.+|..+|.+|...|++++|+++++++++++|++. .++..+|.++.
T Consensus 15 G~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~ 94 (127)
T 4gcn_A 15 GNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQ 94 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHH
Confidence 33445567899999999999999999999999999999999999999999999999998763 57888999999
Q ss_pred HcCCHHHHHHHHHHHHHHCCCC
Q 026642 193 LMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 193 ~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
.+|++++|++.|+++++.+|+.
T Consensus 95 ~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 95 KQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HTTCHHHHHHHHHHHHHHSCCH
T ss_pred HcCCHHHHHHHHHHHHhhCcCH
Confidence 9999999999999999999863
No 41
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.57 E-value=1.5e-13 Score=100.84 Aligned_cols=108 Identities=21% Similarity=0.275 Sum_probs=102.0
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026642 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l 204 (235)
..+++++|+..++++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|++++|++.+
T Consensus 13 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 92 (136)
T 2fo7_A 13 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYY 92 (136)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HcCcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHH
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 205 KDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 205 ~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+++++.+|++..++..++.++.+.++..
T Consensus 93 ~~~~~~~~~~~~~~~~la~~~~~~~~~~ 120 (136)
T 2fo7_A 93 QKALELDPRSAEAWYNLGNAYYKQGDYD 120 (136)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHhCCCChHHHHHHHHHHHHHccHH
Confidence 9999999999999999999998877644
No 42
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.56 E-value=4.9e-14 Score=103.92 Aligned_cols=99 Identities=12% Similarity=0.110 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 131 eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
+|++.|+++++.+|+++.+|..+|.+|...|++++|+.+|+++++++|++..+|+.+|.+|..+|++++|+..|+++++.
T Consensus 3 ~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 3 AITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp CHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--HHHHHHHHHHHhhch
Q 026642 211 RPLL--LRALHDLGRYVSMTL 229 (235)
Q Consensus 211 ~P~~--~~a~~~l~~~~~~~~ 229 (235)
+|++ ..++..+...+.+.+
T Consensus 83 ~~~~~~~~~~~~l~~~l~~l~ 103 (115)
T 2kat_A 83 AQSRGDQQVVKELQVFLRRLA 103 (115)
T ss_dssp HHHHTCHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHhc
Confidence 8854 566666665555443
No 43
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.55 E-value=3.7e-14 Score=105.97 Aligned_cols=90 Identities=11% Similarity=0.070 Sum_probs=85.1
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q 026642 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223 (235)
Q Consensus 144 P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~ 223 (235)
|.+++.|..+|..+++.|++++|+++|+++++++|+++.+|..+|.+|..+|++++|++.|+++++.+|++..+++++|.
T Consensus 1 p~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (126)
T 3upv_A 1 SMKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKAT 80 (126)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchhhcc
Q 026642 224 YVSMTLQIQS 233 (235)
Q Consensus 224 ~~~~~~~~~~ 233 (235)
++.+.++..+
T Consensus 81 ~~~~~~~~~~ 90 (126)
T 3upv_A 81 AQIAVKEYAS 90 (126)
T ss_dssp HHHHTTCHHH
T ss_pred HHHHHhCHHH
Confidence 9998887543
No 44
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.55 E-value=2.8e-13 Score=105.03 Aligned_cols=115 Identities=15% Similarity=0.144 Sum_probs=107.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~ 197 (235)
.+.......+++++|++.++++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|++
T Consensus 47 ~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~ 126 (186)
T 3as5_A 47 HLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRF 126 (186)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcH
Confidence 34444456778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++|++.++++++.+|++..++..++.++.+.++..
T Consensus 127 ~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 161 (186)
T 3as5_A 127 DEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHE 161 (186)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHH
Confidence 99999999999999999999999999999887754
No 45
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.54 E-value=1.9e-13 Score=100.45 Aligned_cols=108 Identities=12% Similarity=0.098 Sum_probs=98.9
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcC
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE-------VEWKLLQALCYELMG 195 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~-------~~a~~~lA~~~~~~g 195 (235)
....+++++|+..|+++++.+|+++.++..+|.++...|++++|+.+++++++.+|++ ..+++.+|.+|...|
T Consensus 14 ~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 93 (131)
T 1elr_A 14 AYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEE 93 (131)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 3445679999999999999999999999999999999999999999999999999887 899999999999999
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 196 KLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
++++|++.|+++++.+| +...+..++.+.....+.
T Consensus 94 ~~~~A~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 128 (131)
T 1elr_A 94 KYKDAIHFYNKSLAEHR-TPDVLKKCQQAEKILKEQ 128 (131)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHHh
Confidence 99999999999999999 688888888887766553
No 46
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.54 E-value=9.8e-14 Score=119.30 Aligned_cols=114 Identities=10% Similarity=0.033 Sum_probs=100.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH-----------------------------
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEF----------------------------- 169 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~----------------------------- 169 (235)
........+++++|++.|+++++.+|++++++..+|.++.+.|++++|+..
T Consensus 123 ~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~~~l~~~~~~~ 202 (287)
T 3qou_A 123 QAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQIELLXQAADT 202 (287)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHHHHHHhhcccC
Confidence 334445677899999999999999999999999999999999999987655
Q ss_pred -----HHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHhhchhhc
Q 026642 170 -----VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL--LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 170 -----l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~--~~a~~~l~~~~~~~~~~~ 232 (235)
|+++++++|+++++++.+|.+|...|++++|++.|+++++.+|++ ..++.+++.++...++..
T Consensus 203 ~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 272 (287)
T 3qou_A 203 PEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGD 272 (287)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTC
T ss_pred ccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCC
Confidence 555577899999999999999999999999999999999999999 889999999998877643
No 47
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.53 E-value=1.2e-13 Score=127.68 Aligned_cols=107 Identities=15% Similarity=0.134 Sum_probs=99.7
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
.+++++|++.|+++++.+|+++.+|..+|.+|.++|++++|+++++++++++|+++.+++.+|.+|..+|++++|++.|+
T Consensus 19 ~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~ 98 (477)
T 1wao_1 19 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98 (477)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCHHHHHHHHHH--Hhhchhhc
Q 026642 206 DILKERPLLLRALHDLGRY--VSMTLQIQ 232 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~--~~~~~~~~ 232 (235)
++++.+|++..++..++.+ +.+.++.+
T Consensus 99 ~al~~~p~~~~~~~~l~~~~~~~~~g~~~ 127 (477)
T 1wao_1 99 TVVKVKPHDKDAKMKYQECNKIVKQKAFE 127 (477)
T ss_dssp HHHHHSTTCTTHHHHHHHHHHHHHHHHHC
T ss_pred HHHHhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888888877 66555433
No 48
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.53 E-value=9.6e-14 Score=127.37 Aligned_cols=109 Identities=11% Similarity=0.042 Sum_probs=98.7
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCC---------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRN---------------VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~---------------~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~l 187 (235)
....+++++|+..|+++++.+|++ ..+|.++|.+|.+.|+|++|+.+|+++++++|+++.+++++
T Consensus 278 ~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~ 357 (457)
T 1kt0_A 278 YFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRR 357 (457)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 344678999999999999999999 79999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
|.+|..+|++++|+..|+++++++|++..++.+++.++.+.++.
T Consensus 358 g~a~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~ 401 (457)
T 1kt0_A 358 GEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEH 401 (457)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTC----CHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998877653
No 49
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.53 E-value=3.7e-14 Score=136.22 Aligned_cols=113 Identities=16% Similarity=0.136 Sum_probs=104.8
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.......+++++|++.|+++++.+|+++++|..+|.+|...|++++|++.|+++++++|+++.+++++|.+|..+|++++
T Consensus 440 a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~ 519 (681)
T 2pzi_A 440 VRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE 519 (681)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT
T ss_pred HHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH
Confidence 33444567799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 200 AKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
++.|+++++++|++..+|+++|.++.+.++.++
T Consensus 520 -~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~ 552 (681)
T 2pzi_A 520 -HKFYQTVWSTNDGVISAAFGLARARSAEGDRVG 552 (681)
T ss_dssp -TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred -HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999998887543
No 50
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.52 E-value=2.3e-13 Score=97.49 Aligned_cols=96 Identities=15% Similarity=0.071 Sum_probs=88.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-C
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN--EVEWKLLQALCYELM-G 195 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~--~~~a~~~lA~~~~~~-g 195 (235)
+.......+++++|+..|+++++.+|++..++..+|.++...|++++|+++++++++.+|+ +..++..+|.++... |
T Consensus 12 ~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~ 91 (112)
T 2kck_A 12 EGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEG 91 (112)
T ss_dssp HHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhC
Confidence 3344455677999999999999999999999999999999999999999999999999999 999999999999999 9
Q ss_pred CHHHHHHHHHHHHHHCCCC
Q 026642 196 KLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~ 214 (235)
++++|++.+++++..+|.+
T Consensus 92 ~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 92 KEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp CSHHHHHHHHHHGGGCCCC
T ss_pred CHHHHHHHHHHHhhcccCC
Confidence 9999999999999999875
No 51
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.52 E-value=4.9e-13 Score=108.91 Aligned_cols=109 Identities=19% Similarity=0.224 Sum_probs=75.2
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~ 202 (235)
....+++++|++.++++++.+|++.+++..+|.++...|++++|+++++++++.+|++..++..+|.++...|++++|++
T Consensus 101 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 180 (243)
T 2q7f_A 101 YVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALS 180 (243)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHH
Confidence 33445566777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 203 LFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 203 ~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
.|+++++.+|++..++..++.+|.+.++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~ 209 (243)
T 2q7f_A 181 QFAAVTEQDPGHADAFYNAGVTYAYKENR 209 (243)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHhCcccHHHHHHHHHHHHHccCH
Confidence 77777777777766777777766666553
No 52
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.52 E-value=2.5e-13 Score=126.65 Aligned_cols=110 Identities=15% Similarity=0.101 Sum_probs=103.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~ 198 (235)
+.......+++++|++.|+++++.+|++.+++..+|.+|...|++++|+++|+++++++|++..+++.+|.+|..+|+++
T Consensus 29 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~ 108 (568)
T 2vsy_A 29 LADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAE 108 (568)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHH
Confidence 44444556779999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHhhc
Q 026642 199 TAKRLFKDILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
+|++.|+++++.+|++..++.+++.++.+.
T Consensus 109 ~A~~~~~~al~~~p~~~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 109 AAAAAYTRAHQLLPEEPYITAQLLNWRRRL 138 (568)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHh
Confidence 999999999999999999999999999888
No 53
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.52 E-value=6.6e-13 Score=108.12 Aligned_cols=114 Identities=9% Similarity=0.027 Sum_probs=106.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS 198 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~ 198 (235)
+.......+++++|++.|+++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|+++
T Consensus 63 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 142 (243)
T 2q7f_A 63 FANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPK 142 (243)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHH
Confidence 34444556789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 199 TAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+|++.++++++.+|++..++..+|.++.+.++.+
T Consensus 143 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 176 (243)
T 2q7f_A 143 LALPYLQRAVELNENDTEARFQFGMCLANEGMLD 176 (243)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999999999998877644
No 54
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.51 E-value=1.7e-13 Score=122.74 Aligned_cols=110 Identities=10% Similarity=0.029 Sum_probs=102.2
Q ss_pred HHHhcCCHHHHHHHHHHHHH----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLE----------------KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL 185 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~----------------~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~ 185 (235)
.....+++++|++.|+++++ .+|.+..+|..+|.+|.+.|++++|+++++++++++|+++.+++
T Consensus 232 ~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~ 311 (370)
T 1ihg_A 232 TFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALY 311 (370)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHH
Confidence 33446788999999999999 78889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 186 LQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 186 ~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
.+|.+|..+|++++|++.|+++++++|++..++..++.++.+..+.
T Consensus 312 ~lg~~~~~~g~~~eA~~~l~~Al~l~P~~~~~~~~l~~~~~~~~~~ 357 (370)
T 1ihg_A 312 RRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQ 357 (370)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988776654
No 55
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.51 E-value=1.9e-13 Score=119.04 Aligned_cols=105 Identities=10% Similarity=0.050 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPR--NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~--~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
++++|++.|+++++.+|+ ++.++..+|.+|...|++++|+++|+++++++|+++.+|..+|.+|...|++++|++.|+
T Consensus 192 ~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 271 (365)
T 4eqf_A 192 VLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYT 271 (365)
T ss_dssp HHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 478999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 206 DILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++++.+|++..++.++|.+|.+.++..
T Consensus 272 ~al~~~p~~~~~~~~l~~~~~~~g~~~ 298 (365)
T 4eqf_A 272 RALEIQPGFIRSRYNLGISCINLGAYR 298 (365)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHTCCH
T ss_pred HHHhcCCCchHHHHHHHHHHHHCCCHH
Confidence 999999999999999999999887754
No 56
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.6e-13 Score=110.25 Aligned_cols=105 Identities=11% Similarity=0.056 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
+++|++.++++++.+|++..++..+|.++...|++++|+++++++++.+|+++.++..+|.+|...|++++|++.|++++
T Consensus 121 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al 200 (258)
T 3uq3_A 121 AEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAI 200 (258)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 45555566666668888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 209 KERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 209 ~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+.+|++..++..+|.++.+.++..+
T Consensus 201 ~~~~~~~~~~~~l~~~~~~~g~~~~ 225 (258)
T 3uq3_A 201 EKDPNFVRAYIRKATAQIAVKEYAS 225 (258)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HhCHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999988877543
No 57
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.50 E-value=1.5e-13 Score=107.46 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=86.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHH
Q 026642 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222 (235)
Q Consensus 143 ~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~ 222 (235)
++.++++|..+|.+++..|+|++|+++|+++++++|+++.+|+.+|.+|..+|++++|+..|+++++++|++..+|+++|
T Consensus 7 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 86 (164)
T 3sz7_A 7 PTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLG 86 (164)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 56678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchhhcc
Q 026642 223 RYVSMTLQIQS 233 (235)
Q Consensus 223 ~~~~~~~~~~~ 233 (235)
.+|.+.++..+
T Consensus 87 ~~~~~~g~~~~ 97 (164)
T 3sz7_A 87 LARFDMADYKG 97 (164)
T ss_dssp HHHHHTTCHHH
T ss_pred HHHHHccCHHH
Confidence 99998887543
No 58
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.50 E-value=3.4e-13 Score=104.61 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=103.1
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
...+++++|++.++++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|++++|.+.
T Consensus 19 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~ 98 (186)
T 3as5_A 19 AKAGRYSQAVMLLEQVYDADAFDVDVALHLGIAYVKTGAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPL 98 (186)
T ss_dssp HHHTCHHHHHHHHTTTCCTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHhCccChHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHH
Confidence 34566899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 204 FKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++++++.+|++..++..+|.++.+.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 127 (186)
T 3as5_A 99 LIKVAEANPINFNVRFRLGVALDNLGRFD 127 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHhcCcHhHHHHHHHHHHHHHcCcHH
Confidence 99999999999999999999998877644
No 59
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.50 E-value=2e-13 Score=108.33 Aligned_cols=109 Identities=13% Similarity=0.029 Sum_probs=81.7
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH----------------------------------HH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEAL----------------------------------EF 169 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi----------------------------------~~ 169 (235)
...+++++|+..|+++++.+|++++++..+|.++...|++++|+ ..
T Consensus 17 ~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~~~~a~~~ 96 (176)
T 2r5s_A 17 LQQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQDNSYKSLIAKLELHQQAAESPELKR 96 (176)
T ss_dssp HHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCHHHHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCChHHHHHHHHHHHHhhcccchHHHH
Confidence 33455666666666666666666666666666666666666554 45
Q ss_pred HHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHhhchhhc
Q 026642 170 VKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL--LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 170 l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~--~~a~~~l~~~~~~~~~~~ 232 (235)
++++++++|+++.+++.+|.++...|++++|+..|+++++.+|++ ..++.+++.++...++..
T Consensus 97 ~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~ 161 (176)
T 2r5s_A 97 LEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGN 161 (176)
T ss_dssp HHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCC
Confidence 556667788888899999999999999999999999999999876 568888888888776644
No 60
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.50 E-value=3.4e-13 Score=101.25 Aligned_cols=92 Identities=18% Similarity=0.096 Sum_probs=86.2
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHH
Q 026642 141 EKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHD 220 (235)
Q Consensus 141 ~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~ 220 (235)
..++.+++.+..+|..++..|++++|+.+|+++++++|+++.++..+|.++..+|++++|+..++++++.+|++..++++
T Consensus 3 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~ 82 (137)
T 3q49_B 3 HMKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFF 82 (137)
T ss_dssp ---CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHH
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhchhhc
Q 026642 221 LGRYVSMTLQIQ 232 (235)
Q Consensus 221 l~~~~~~~~~~~ 232 (235)
+|.++.+.++..
T Consensus 83 l~~~~~~~~~~~ 94 (137)
T 3q49_B 83 LGQCQLEMESYD 94 (137)
T ss_dssp HHHHHHHTTCHH
T ss_pred HHHHHHHHhhHH
Confidence 999999887754
No 61
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.49 E-value=1.4e-13 Score=104.50 Aligned_cols=88 Identities=11% Similarity=0.120 Sum_probs=79.9
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-------HHH
Q 026642 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL-------LRA 217 (235)
Q Consensus 145 ~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~-------~~a 217 (235)
+.+.++..+|..++++|+|++|+++|+++++++|+++.+|.++|.+|..+|++++|++.|+++++++|++ ..+
T Consensus 6 d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~ 85 (127)
T 4gcn_A 6 DAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKA 85 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHH
Confidence 3467889999999999999999999999999999999999999999999999999999999999999876 357
Q ss_pred HHHHHHHHhhchhhc
Q 026642 218 LHDLGRYVSMTLQIQ 232 (235)
Q Consensus 218 ~~~l~~~~~~~~~~~ 232 (235)
|.++|.++...++..
T Consensus 86 ~~~lg~~~~~~~~~~ 100 (127)
T 4gcn_A 86 MSRAGNAFQKQNDLS 100 (127)
T ss_dssp HHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHcCCHH
Confidence 888888888777643
No 62
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.49 E-value=3.5e-13 Score=94.07 Aligned_cols=85 Identities=20% Similarity=0.275 Sum_probs=80.8
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q 026642 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223 (235)
Q Consensus 144 P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~ 223 (235)
+.+++++..+|.++...|++++|+.+++++++.+|++..+++.+|.++...|++++|++.|+++++.+|++..++.+++.
T Consensus 6 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~ 85 (91)
T 1na3_A 6 GNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGN 85 (91)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhc
Q 026642 224 YVSMT 228 (235)
Q Consensus 224 ~~~~~ 228 (235)
++.+.
T Consensus 86 ~~~~~ 90 (91)
T 1na3_A 86 AKQKQ 90 (91)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 98764
No 63
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.49 E-value=1.5e-13 Score=132.12 Aligned_cols=109 Identities=14% Similarity=0.084 Sum_probs=103.4
Q ss_pred HhcCCHHHHHHHHHHHH--------HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 026642 124 DALMGKSEVEEMFEKLL--------EKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL--------~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g 195 (235)
...+++++|++.|++++ +.+|++.+++..+|.+|.+.|++++|++.|+++++++|++..+|+.+|.+|..+|
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g 481 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTG 481 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHT
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcC
Confidence 55677899999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 196 KLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++++|++.|+++++++|++..+++++|.++.+.++.+
T Consensus 482 ~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~ 518 (681)
T 2pzi_A 482 DYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTD 518 (681)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCC
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChH
Confidence 9999999999999999999999999999999887754
No 64
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.49 E-value=1.4e-13 Score=128.34 Aligned_cols=107 Identities=12% Similarity=0.050 Sum_probs=86.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKD 206 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~k 206 (235)
+++++|++.|+++++.+|++.++|..+|.++...|++++|+++|+++++++|++..++..+|.+|..+|++++|++.|++
T Consensus 3 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 82 (568)
T 2vsy_A 3 ADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQ 82 (568)
T ss_dssp ------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 207 ILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 207 aL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+++.+|++..+++++|.+|.+.++.++
T Consensus 83 al~~~p~~~~~~~~la~~~~~~g~~~~ 109 (568)
T 2vsy_A 83 ASDAAPEHPGIALWLGHALEDAGQAEA 109 (568)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHcCCHHH
Confidence 999999999999999999998887543
No 65
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.49 E-value=6.2e-13 Score=115.08 Aligned_cols=102 Identities=15% Similarity=0.093 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPR--NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKD 206 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~--~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~k 206 (235)
+++|+..|+++++.+|+ ++.++..+|.++...|++++|+.+|+++++++|+++.++..+|.++...|++++|++.|++
T Consensus 197 ~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 276 (368)
T 1fch_A 197 FLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRR 276 (368)
T ss_dssp HHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 45555555555555555 4555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHHCCCCHHHHHHHHHHHhhchh
Q 026642 207 ILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 207 aL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
+++.+|++..++.++|.+|.+.++
T Consensus 277 al~~~~~~~~~~~~l~~~~~~~g~ 300 (368)
T 1fch_A 277 ALELQPGYIRSRYNLGISCINLGA 300 (368)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHhCCCcHHHHHHHHHHHHHCCC
Confidence 555555555555555555444443
No 66
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.49 E-value=2.6e-13 Score=124.79 Aligned_cols=106 Identities=7% Similarity=0.005 Sum_probs=101.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--------CCHHHHHHHHHHHHhhCC---CCHHHHHHHHHHHHHcC
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRR--------GRNKEALEFVKRLIDIEP---NEVEWKLLQALCYELMG 195 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~--------g~~~eAi~~l~kai~l~P---~~~~a~~~lA~~~~~~g 195 (235)
+++++|++.|+++++.+|++..+|..+|.+|... |++++|+++|+++++++| +++.+|+.+|.+|..+|
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g 272 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEE 272 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcC
Confidence 4589999999999999999999999999999999 999999999999999999 99999999999999999
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 196 KLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++++|++.|+++++++|++..++.+++.++...++.+
T Consensus 273 ~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~ 309 (474)
T 4abn_A 273 SYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLT 309 (474)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988777644
No 67
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.49 E-value=3.5e-13 Score=112.86 Aligned_cols=114 Identities=12% Similarity=0.032 Sum_probs=101.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRN---VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE---VEWKLLQALCYE 192 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~---~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~---~~a~~~lA~~~~ 192 (235)
........+++++|++.|+++++.+|++ .+++..+|.+|.+.|++++|+..|+++++++|++ +.+++.+|.++.
T Consensus 21 ~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~ 100 (261)
T 3qky_A 21 RAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYY 100 (261)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHH
Confidence 3344455778999999999999999999 9999999999999999999999999999998854 678999999999
Q ss_pred H--------cCCHHHHHHHHHHHHHHCCCCHHHH-----------------HHHHHHHhhchhhc
Q 026642 193 L--------MGKLSTAKRLFKDILKERPLLLRAL-----------------HDLGRYVSMTLQIQ 232 (235)
Q Consensus 193 ~--------~g~~~~A~~~l~kaL~~~P~~~~a~-----------------~~l~~~~~~~~~~~ 232 (235)
. +|++++|+..|+++++.+|++..+. +.+|.+|.+.++..
T Consensus 101 ~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 165 (261)
T 3qky_A 101 KLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYE 165 (261)
T ss_dssp HHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HhcccccccchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHH
Confidence 9 9999999999999999999985555 78899988887744
No 68
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.49 E-value=1.2e-13 Score=114.53 Aligned_cols=105 Identities=14% Similarity=0.036 Sum_probs=90.8
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.......+++++|+..|+++++.+|+++++|..+|.++...|++++|+++|+++++++|+++.++..+|.+|...|++++
T Consensus 50 ~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~ 129 (275)
T 1xnf_A 50 GVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKL 129 (275)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHH
Confidence 33444566789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHH
Q 026642 200 AKRLFKDILKERPLLLRALHDLGRY 224 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~~a~~~l~~~ 224 (235)
|++.|+++++.+|++...+..++..
T Consensus 130 A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (275)
T 1xnf_A 130 AQDDLLAFYQDDPNDPFRSLWLYLA 154 (275)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCChHHHHHHHHH
Confidence 9999999999999997666555544
No 69
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.48 E-value=2.1e-13 Score=125.46 Aligned_cols=106 Identities=16% Similarity=0.041 Sum_probs=100.2
Q ss_pred HHHhcCCH-HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc------
Q 026642 122 KRDALMGK-SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM------ 194 (235)
Q Consensus 122 ~~~~~~~~-~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~------ 194 (235)
.....+++ ++|++.|+++++.+|+++++|..+|.+|...|++++|+++|+++++++|+ ..++..+|.+|..+
T Consensus 111 ~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~lg~~~~~~~~~~~~ 189 (474)
T 4abn_A 111 ALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN-KVSLQNLSMVLRQLQTDSGD 189 (474)
T ss_dssp HHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC-HHHHHHHHHHHTTCCCSCHH
T ss_pred HHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-HHHHHHHHHHHHHhccCChh
Confidence 33445678 99999999999999999999999999999999999999999999999999 79999999999999
Q ss_pred ---CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhc
Q 026642 195 ---GKLSTAKRLFKDILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 195 ---g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
|++++|++.|+++++++|++..+|+++|.+|...
T Consensus 190 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 190 EHSRHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSL 226 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999876
No 70
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.48 E-value=3.5e-13 Score=101.46 Aligned_cols=86 Identities=13% Similarity=-0.089 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
+.+..+|..+++.|++++|+..|+++++++|+++.+|+.+|.++..+|++++|+..|+++++++|++..+++++|.++.+
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~ 97 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTN 97 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chhhcc
Q 026642 228 TLQIQS 233 (235)
Q Consensus 228 ~~~~~~ 233 (235)
.++..+
T Consensus 98 ~g~~~~ 103 (121)
T 1hxi_A 98 EHNANA 103 (121)
T ss_dssp HHHHHH
T ss_pred cCCHHH
Confidence 877543
No 71
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.48 E-value=1.1e-12 Score=107.93 Aligned_cols=114 Identities=17% Similarity=0.079 Sum_probs=98.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCC
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID--IEPNEVEWKLLQALCYELMGK 196 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~--l~P~~~~a~~~lA~~~~~~g~ 196 (235)
+.......+++++|++.|+++++.+|++..++..+|.++...|++++|+++++++++ .+|++..++..+|.+|...|+
T Consensus 77 la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~ 156 (252)
T 2ho1_A 77 LAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKK 156 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCC
Confidence 334445566789999999999999999999999999999999999999999999998 788888899999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 197 LSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+++|++.|+++++.+|++..++..++.++.+.++..
T Consensus 157 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 192 (252)
T 2ho1_A 157 PAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYV 192 (252)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHH
Confidence 999999999999999999999999998888877644
No 72
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.48 E-value=8.5e-13 Score=115.99 Aligned_cols=103 Identities=14% Similarity=0.108 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
.+++|+..|+++++.+|+++.++..+|.++...|++++|++.|+++++++|+++.++..+|.++...|++++|++.|+++
T Consensus 218 ~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a 297 (388)
T 1w3b_A 218 IFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 297 (388)
T ss_dssp CTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 34455555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHCCCCHHHHHHHHHHHhhchh
Q 026642 208 LKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 208 L~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
++.+|++..++.+++.++.+.++
T Consensus 298 l~~~p~~~~~~~~l~~~~~~~g~ 320 (388)
T 1w3b_A 298 LRLCPTHADSLNNLANIKREQGN 320 (388)
T ss_dssp HHHCTTCHHHHHHHHHHHHTTTC
T ss_pred HhhCcccHHHHHHHHHHHHHcCC
Confidence 55555555555555555544443
No 73
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.48 E-value=1.4e-13 Score=98.66 Aligned_cols=90 Identities=10% Similarity=0.095 Sum_probs=86.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC--CHHHHHH
Q 026642 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL--LLRALHD 220 (235)
Q Consensus 143 ~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~--~~~a~~~ 220 (235)
+|++++++..+|.++...|++++|+.+++++++++|++..++..+|.++...|++++|++.|+++++.+|+ +..++..
T Consensus 2 ~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 81 (112)
T 2kck_A 2 VDQNPEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAA 81 (112)
T ss_dssp CCSSTTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred HHHHHhhc-hhhc
Q 026642 221 LGRYVSMT-LQIQ 232 (235)
Q Consensus 221 l~~~~~~~-~~~~ 232 (235)
++.++.+. ++.+
T Consensus 82 l~~~~~~~~~~~~ 94 (112)
T 2kck_A 82 KADALRYIEGKEV 94 (112)
T ss_dssp HHHHHTTCSSCSH
T ss_pred HHHHHHHHhCCHH
Confidence 99999988 7644
No 74
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.48 E-value=9.7e-13 Score=115.61 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=77.8
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
...+++++|+..++++++.+|.++++|..+|.++.+.|++++|++.|+++++++|++..++..+|.++...|++++|++.
T Consensus 44 ~~~~~~~~a~~~~~~a~~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 123 (388)
T 1w3b_A 44 FQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQA 123 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 33455677777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 204 FKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
|+++++.+|++..++..+|.++.+.++.
T Consensus 124 ~~~al~~~p~~~~~~~~l~~~~~~~g~~ 151 (388)
T 1w3b_A 124 YVSALQYNPDLYCVRSDLGNLLKALGRL 151 (388)
T ss_dssp HHHHHHHCTTCTHHHHHHHHHHHTTSCH
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHccCH
Confidence 7777777777777777777777665543
No 75
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.48 E-value=5.7e-13 Score=107.33 Aligned_cols=107 Identities=11% Similarity=-0.014 Sum_probs=98.0
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
...+++++|++.|++++ +| ++.++..+|.+|...|++++|+++|+++++++|+++.+++.+|.+|..+|++++|++.
T Consensus 17 ~~~~~~~~A~~~~~~a~--~~-~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~ 93 (213)
T 1hh8_A 17 ADKKDWKGALDAFSAVQ--DP-HSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKD 93 (213)
T ss_dssp HHTTCHHHHHHHHHTSS--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHhCCHHHHHHHHHHHc--CC-ChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHH
Confidence 34567999999999986 34 7899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCH----------------HHHHHHHHHHhhchhhcc
Q 026642 204 FKDILKERPLLL----------------RALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 204 l~kaL~~~P~~~----------------~a~~~l~~~~~~~~~~~~ 233 (235)
|+++++..|++. .+++++|.++.+.++..+
T Consensus 94 ~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 139 (213)
T 1hh8_A 94 LKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK 139 (213)
T ss_dssp HHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHH
Confidence 999999888866 999999999998887543
No 76
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.48 E-value=3.3e-13 Score=97.47 Aligned_cols=87 Identities=16% Similarity=0.123 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC------HHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL------LRALH 219 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~------~~a~~ 219 (235)
++++|..+|..+...|++++|+++|+++++++|+++.++.++|.+|..+|++++|++.|+++++.+|++ ..+++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~ 82 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQY 82 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHH
Confidence 578899999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred HHHHHHhhchhhc
Q 026642 220 DLGRYVSMTLQIQ 232 (235)
Q Consensus 220 ~l~~~~~~~~~~~ 232 (235)
.++.++...++.+
T Consensus 83 ~~~~~~~~~~~~~ 95 (111)
T 2l6j_A 83 RLELAQGAVGSVQ 95 (111)
T ss_dssp HHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhHh
Confidence 9999988776543
No 77
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.47 E-value=9.3e-13 Score=105.58 Aligned_cols=113 Identities=19% Similarity=0.239 Sum_probs=99.1
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHcCC
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRR-GRNKEALEFVKRLID--IEPNEVEWKLLQALCYELMGK 196 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~-g~~~eAi~~l~kai~--l~P~~~~a~~~lA~~~~~~g~ 196 (235)
.......+++++|++.|+++++.+|++..++..+|.++... |++++|+++++++++ .+|++..++..+|.++...|+
T Consensus 49 ~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 128 (225)
T 2vq2_A 49 AEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQ 128 (225)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCC
Confidence 33444566789999999999999999999999999999999 999999999999999 667778899999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 197 LSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+++|++.++++++.+|++..++..++.++.+.++..
T Consensus 129 ~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 164 (225)
T 2vq2_A 129 FGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLG 164 (225)
T ss_dssp HHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHH
Confidence 999999999999999999999999999988877654
No 78
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.47 E-value=2.5e-13 Score=98.69 Aligned_cols=89 Identities=13% Similarity=0.165 Sum_probs=77.9
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--HHHHH
Q 026642 142 KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL--LRALH 219 (235)
Q Consensus 142 ~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~--~~a~~ 219 (235)
.+|+++.+|..+|.+|...|++++|+++|+++++++|+++.+|+.+|.+|..+|++++|++.|++++++.|++ ..+..
T Consensus 2 ~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~ 81 (100)
T 3ma5_A 2 EDPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLS 81 (100)
T ss_dssp ---CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999988754 66666
Q ss_pred HHHHHHhhchh
Q 026642 220 DLGRYVSMTLQ 230 (235)
Q Consensus 220 ~l~~~~~~~~~ 230 (235)
.+...+.+...
T Consensus 82 ~l~~~l~~~~~ 92 (100)
T 3ma5_A 82 ELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHccc
Confidence 66666655443
No 79
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.47 E-value=2.1e-12 Score=107.07 Aligned_cols=103 Identities=15% Similarity=0.065 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEK----EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF 204 (235)
Q Consensus 129 ~~eA~~~~e~aL~~----~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l 204 (235)
+++|++.|+++++. +|+++.++..+|.++...|++++|+++++++++++|+++.++..+|.+|...|++++|++.|
T Consensus 21 ~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 100 (275)
T 1xnf_A 21 QEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAF 100 (275)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHH
Confidence 66777777777775 34566777777777777777777777777777777777777777777777777777777777
Q ss_pred HHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 205 KDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 205 ~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
+++++.+|++..++.++|.++.+.++.
T Consensus 101 ~~al~~~~~~~~~~~~la~~~~~~g~~ 127 (275)
T 1xnf_A 101 DSVLELDPTYNYAHLNRGIALYYGGRD 127 (275)
T ss_dssp HHHHHHCTTCTHHHHHHHHHHHHTTCH
T ss_pred HHHHhcCccccHHHHHHHHHHHHhccH
Confidence 777777777777777777777666654
No 80
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.47 E-value=1.7e-12 Score=104.02 Aligned_cols=114 Identities=18% Similarity=0.006 Sum_probs=96.9
Q ss_pred HHHHHHhc-CCHHHHHHHHHHHHH--hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 026642 119 LKEKRDAL-MGKSEVEEMFEKLLE--KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195 (235)
Q Consensus 119 ~~e~~~~~-~~~~eA~~~~e~aL~--~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g 195 (235)
+..-.... +++++|+..++++++ .+|.+..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|
T Consensus 82 l~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~ 161 (225)
T 2vq2_A 82 YGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAG 161 (225)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCcHHHHHHHHHHHHcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcC
Confidence 33344456 778999999999998 677778999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHhhchhhc
Q 026642 196 KLSTAKRLFKDILKERP-LLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P-~~~~a~~~l~~~~~~~~~~~ 232 (235)
++++|.+.++++++.+| ++..++..++.++.+.++.+
T Consensus 162 ~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (225)
T 2vq2_A 162 QLGDADYYFKKYQSRVEVLQADDLLLGWKIAKALGNAQ 199 (225)
T ss_dssp CHHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHH
T ss_pred CHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCcHH
Confidence 99999999999999999 88888887777777666543
No 81
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.46 E-value=5.2e-13 Score=110.97 Aligned_cols=103 Identities=14% Similarity=0.026 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC----HHHHHHHHHHHHHcCCHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE----VEWKLLQALCYELMGKLSTAKR 202 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~----~~a~~~lA~~~~~~g~~~~A~~ 202 (235)
+++++|+..|+++++.+|++++++..+|.++...|++++|+++++++++ .|++ ..++..+|.+|...|++++|++
T Consensus 17 ~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~-~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~ 95 (272)
T 3u4t_A 17 NNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFS-KVNATKAKSADFEYYGKILMKKGQDSLAIQ 95 (272)
T ss_dssp TCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHT-TSCTTTCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHh-ccCchhHHHHHHHHHHHHHHHcccHHHHHH
Confidence 3345555555555555555555555555555555555555555555554 2222 2224455555555555555555
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 203 LFKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 203 ~l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
.|+++++.+|++..++.++|.+|.+.++
T Consensus 96 ~~~~a~~~~~~~~~~~~~l~~~~~~~~~ 123 (272)
T 3u4t_A 96 QYQAAVDRDTTRLDMYGQIGSYFYNKGN 123 (272)
T ss_dssp HHHHHHHHSTTCTHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCcccHHHHHHHHHHHHHccC
Confidence 5555555555555555555555444443
No 82
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.46 E-value=1.8e-12 Score=112.11 Aligned_cols=96 Identities=11% Similarity=0.090 Sum_probs=89.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.......+++++|+..|+++++.+|+++.++..+|.++...|++++|+.+|+++++++|+++.++..+|.+|...|++++
T Consensus 224 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~ 303 (368)
T 1fch_A 224 GVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHRE 303 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH
Confidence 33444567789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCH
Q 026642 200 AKRLFKDILKERPLLL 215 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~ 215 (235)
|+..|+++++.+|++.
T Consensus 304 A~~~~~~al~~~~~~~ 319 (368)
T 1fch_A 304 AVEHFLEALNMQRKSR 319 (368)
T ss_dssp HHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHhCCCCC
Confidence 9999999999999873
No 83
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.46 E-value=1.6e-12 Score=109.98 Aligned_cols=111 Identities=14% Similarity=0.101 Sum_probs=90.2
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~ 201 (235)
.....+++++|++.++++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.+|...|++++|+
T Consensus 181 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~ 260 (327)
T 3cv0_A 181 LYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAA 260 (327)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHH
Confidence 33445667888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHCCC------------CHHHHHHHHHHHhhchhhc
Q 026642 202 RLFKDILKERPL------------LLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 202 ~~l~kaL~~~P~------------~~~a~~~l~~~~~~~~~~~ 232 (235)
+.|+++++.+|+ +..++..++.++.+.++..
T Consensus 261 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 303 (327)
T 3cv0_A 261 KQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPD 303 (327)
T ss_dssp HHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHH
Confidence 888888888888 6788888888887776643
No 84
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.46 E-value=1.6e-12 Score=102.44 Aligned_cols=98 Identities=11% Similarity=0.098 Sum_probs=90.5
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQG-NMRRGRN--KEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~-~~~~g~~--~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~ 196 (235)
.......+++++|+..|+++++.+|+++.++..+|.+ +...|++ ++|+.+++++++.+|++..+++.+|.+|...|+
T Consensus 51 g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~ 130 (177)
T 2e2e_A 51 GEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQAN 130 (177)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccc
Confidence 3344456679999999999999999999999999999 8899999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHH
Q 026642 197 LSTAKRLFKDILKERPLLLRA 217 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P~~~~a 217 (235)
+++|+..|+++++.+|++...
T Consensus 131 ~~~A~~~~~~al~~~p~~~~~ 151 (177)
T 2e2e_A 131 YAQAIELWQKVMDLNSPRINR 151 (177)
T ss_dssp HHHHHHHHHHHHHTCCTTSCH
T ss_pred HHHHHHHHHHHHhhCCCCccH
Confidence 999999999999999998433
No 85
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.46 E-value=8.9e-13 Score=108.53 Aligned_cols=106 Identities=12% Similarity=-0.002 Sum_probs=100.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKD 206 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~k 206 (235)
+++++|++.|+++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.+|...|++++|++.|++
T Consensus 51 ~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 130 (252)
T 2ho1_A 51 GNTEQAKVPLRKALEIDPSSADAHAALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQKRYEEAYQRLLE 130 (252)
T ss_dssp TCTGGGHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHhcCCChHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHH--HCCCCHHHHHHHHHHHhhchhhc
Q 026642 207 ILK--ERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 207 aL~--~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+++ .+|++..++..+|.++.+.++.+
T Consensus 131 ~~~~~~~~~~~~~~~~la~~~~~~g~~~ 158 (252)
T 2ho1_A 131 ASQDTLYPERSRVFENLGLVSLQMKKPA 158 (252)
T ss_dssp HTTCTTCTTHHHHHHHHHHHHHHTTCHH
T ss_pred HHhCccCcccHHHHHHHHHHHHHcCCHH
Confidence 999 88999999999999998887644
No 86
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.46 E-value=1.5e-12 Score=106.29 Aligned_cols=96 Identities=19% Similarity=0.352 Sum_probs=84.0
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc----
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELM---- 194 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~---- 194 (235)
+.......+++++|+..|+++++.+|+++++|..+|.++...|++++|+.+|+++++++|+++.+++.+|.+|+..
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~ 139 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAEQE 139 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhHHH
Confidence 3444455678999999999999999999999999999999999999999999999999999999999988877544
Q ss_pred -------------------------------CCHHHHHHHHHHHHHHCCCC
Q 026642 195 -------------------------------GKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 195 -------------------------------g~~~~A~~~l~kaL~~~P~~ 214 (235)
|++++|+..|+++++++|+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~ 190 (208)
T 3urz_A 140 KKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST 190 (208)
T ss_dssp HHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH
T ss_pred HHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH
Confidence 45778888888888888874
No 87
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.45 E-value=2.5e-13 Score=116.47 Aligned_cols=94 Identities=10% Similarity=0.070 Sum_probs=89.3
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A 200 (235)
......+++++|+..|+++++.+|+++.++..+|.+|...|++++|+..++++++++|++..+++.+|.+|..+|++++|
T Consensus 12 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A 91 (281)
T 2c2l_A 12 NRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEA 91 (281)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHH
Confidence 34445677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCC
Q 026642 201 KRLFKDILKERPLL 214 (235)
Q Consensus 201 ~~~l~kaL~~~P~~ 214 (235)
++.|+++++++|++
T Consensus 92 ~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 92 IANLQRAYSLAKEQ 105 (281)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCccc
Confidence 99999999999976
No 88
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.45 E-value=1.9e-12 Score=109.70 Aligned_cols=106 Identities=13% Similarity=0.045 Sum_probs=64.6
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG-RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g-~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
..+++++|+..++++++.+|+++++|..+|.++...| ++++|+++++++++++|+++.++..+|.++...|++++|++.
T Consensus 68 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~ 147 (330)
T 3hym_B 68 ELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAA 147 (330)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHH
Confidence 3344566666666666666666666666666666666 666666666666666666666666666666666666666666
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 204 FKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
|+++++.+|++..++..+|.++...++
T Consensus 148 ~~~a~~~~~~~~~~~~~l~~~~~~~~~ 174 (330)
T 3hym_B 148 YFTAAQLMKGCHLPMLYIGLEYGLTNN 174 (330)
T ss_dssp HHHHHHHTTTCSHHHHHHHHHHHHTTC
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHhh
Confidence 666666666665555556555555544
No 89
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.45 E-value=2.4e-12 Score=111.95 Aligned_cols=97 Identities=16% Similarity=0.203 Sum_probs=87.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~ 197 (235)
.........+++++|++.|+++++.+|+++++|..+|.+|...|++++|+++|+++++++|++..++..+|.+|...|++
T Consensus 70 ~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~ 149 (365)
T 4eqf_A 70 EEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQ 149 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccH
Confidence 34445555677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCC
Q 026642 198 STAKRLFKDILKERPLL 214 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~ 214 (235)
++|++.|+++++.+|++
T Consensus 150 ~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 150 QDACEALKNWIKQNPKY 166 (365)
T ss_dssp HHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHhCccc
Confidence 99999999888877764
No 90
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.45 E-value=1.6e-12 Score=110.21 Aligned_cols=114 Identities=13% Similarity=0.008 Sum_probs=105.8
Q ss_pred HHHHHHhcC-CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026642 119 LKEKRDALM-GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197 (235)
Q Consensus 119 ~~e~~~~~~-~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~ 197 (235)
+.......+ ++++|++.|+++++.+|++.++|..+|.++...|++++|+++++++++.+|++...+..+|.+|...|++
T Consensus 96 l~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~ 175 (330)
T 3hym_B 96 VGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNS 175 (330)
T ss_dssp HHHHHHHSCSCHHHHHHHHHHHHTTCTTCTHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhH
Confidence 334444556 7899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++|++.|+++++.+|++..++..+|.++.+.++..
T Consensus 176 ~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~ 210 (330)
T 3hym_B 176 KLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWK 210 (330)
T ss_dssp HHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHcccHH
Confidence 99999999999999999999999999999887644
No 91
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.45 E-value=2.4e-12 Score=111.13 Aligned_cols=113 Identities=11% Similarity=0.005 Sum_probs=94.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHH--HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVM--QGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la--~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~ 196 (235)
..+-....++.++|++.|+++++.+|++.......+ .++...|++++|+..|+++++.+|+++.+++.+|.++..+|+
T Consensus 136 l~~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~ 215 (291)
T 3mkr_A 136 TVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGR 215 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCC
Confidence 444455567789999999999999999875554444 333445889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 197 LSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
+++|+..|+++++.+|++..++.++|.++...++.
T Consensus 216 ~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~ 250 (291)
T 3mkr_A 216 WEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKP 250 (291)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999888877664
No 92
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=2.2e-12 Score=105.55 Aligned_cols=104 Identities=9% Similarity=0.026 Sum_probs=97.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A 200 (235)
......+++++|+..|+++++.+|++..++..+|.++...|++++|+.+++++++.+|+++.++..+|.+|..+|++++|
T Consensus 147 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A 226 (258)
T 3uq3_A 147 KEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASA 226 (258)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHH
Confidence 34445677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHC------CCCHHHHHHHHHH
Q 026642 201 KRLFKDILKER------PLLLRALHDLGRY 224 (235)
Q Consensus 201 ~~~l~kaL~~~------P~~~~a~~~l~~~ 224 (235)
++.|+++++.+ |++..++..+..+
T Consensus 227 ~~~~~~a~~~~~~~~~~p~~~~~~~~l~~~ 256 (258)
T 3uq3_A 227 LETLDAARTKDAEVNNGSSAREIDQLYYKA 256 (258)
T ss_dssp HHHHHHHHHHHHHHHTTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHhChhhcCCCchHHHHHHHHHh
Confidence 99999999999 9998888877654
No 93
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.44 E-value=2.7e-12 Score=108.63 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=101.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
++++|++.++++++.+|++..++..+|.++...|++++|+++++++++.+|+++.++..+|.++...|++++|++.|+++
T Consensus 153 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 232 (327)
T 3cv0_A 153 EYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRA 232 (327)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 208 LKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 208 L~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
++.+|++..++..++.++.+.++.++
T Consensus 233 ~~~~~~~~~~~~~l~~~~~~~g~~~~ 258 (327)
T 3cv0_A 233 LDINPGYVRVMYNMAVSYSNMSQYDL 258 (327)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999998877543
No 94
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.43 E-value=1.9e-12 Score=107.51 Aligned_cols=113 Identities=9% Similarity=0.042 Sum_probs=102.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~ 197 (235)
.+..-....+++++|++.|+++++.+|++.++|..+|.+|...|++++|+++++++++++|+++.++..+|...+..+++
T Consensus 79 ~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~ 158 (272)
T 3u4t_A 79 YYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEY 158 (272)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHH
Confidence 34445556678999999999999999999999999999999999999999999999999999999999999656667799
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
++|++.|+++++.+|++..+++.++.++...++
T Consensus 159 ~~A~~~~~~a~~~~p~~~~~~~~~~~~~~~~~~ 191 (272)
T 3u4t_A 159 VKADSSFVKVLELKPNIYIGYLWRARANAAQDP 191 (272)
T ss_dssp HHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHhCccchHHHHHHHHHHHHcCc
Confidence 999999999999999999999999999887765
No 95
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.43 E-value=3.6e-12 Score=102.62 Aligned_cols=108 Identities=11% Similarity=-0.029 Sum_probs=95.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH----------------H
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV----------------E 182 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~----------------~ 182 (235)
+.......+++++|++.|+++++.+|+++.++..+|.+|...|++++|+++|++++++.|++. .
T Consensus 43 lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~ 122 (213)
T 1hh8_A 43 IGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACE 122 (213)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchH
Confidence 444445567899999999999999999999999999999999999999999999999888876 9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHh
Q 026642 183 WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226 (235)
Q Consensus 183 a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~ 226 (235)
+++.+|.+|..+|++++|++.|+++++.+|++.......++...
T Consensus 123 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~ 166 (213)
T 1hh8_A 123 VLYNIAFMYAKKEEWKKAEEQLALATSMKSEPRHSKIDKAMECV 166 (213)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHcCcccccchHHHHHHHH
Confidence 99999999999999999999999999999988555555554444
No 96
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.42 E-value=2.9e-12 Score=109.41 Aligned_cols=102 Identities=23% Similarity=0.189 Sum_probs=95.7
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A 200 (235)
......+++++|+..|+++++.+|++++++..+|.++...|++++|+..++++++++|++..++..+|.++...|++++|
T Consensus 11 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A 90 (359)
T 3ieg_A 11 KKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEA 90 (359)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHH
Confidence 33445667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCC---CCHHHHHHHH
Q 026642 201 KRLFKDILKERP---LLLRALHDLG 222 (235)
Q Consensus 201 ~~~l~kaL~~~P---~~~~a~~~l~ 222 (235)
+..|+++++.+| ++..++..++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~l~ 115 (359)
T 3ieg_A 91 EDDFKKVLKSNPSEQEEKEAESQLV 115 (359)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcccChHHHHHHHH
Confidence 999999999999 8888888773
No 97
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.41 E-value=3.4e-13 Score=118.97 Aligned_cols=102 Identities=12% Similarity=0.073 Sum_probs=80.7
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNV-----------------EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQA 188 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~-----------------~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA 188 (235)
.+++++|+..|+++++.+|++. .+|..+|.+|.+.|+|++|+.+|+++++++|+++.+++++|
T Consensus 192 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 271 (338)
T 2if4_A 192 EEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRG 271 (338)
T ss_dssp SSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4567999999999999999987 49999999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 189 LCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 189 ~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
.+|..+|++++|+.+|+++++++|++..++..++.+..+
T Consensus 272 ~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~ 310 (338)
T 2if4_A 272 KAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQ 310 (338)
T ss_dssp HHHHTTTCHHHHHHHHHHTTC------------------
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988887443
No 98
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.40 E-value=1.8e-12 Score=95.73 Aligned_cols=90 Identities=12% Similarity=0.197 Sum_probs=85.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHH
Q 026642 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLG 222 (235)
Q Consensus 143 ~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~ 222 (235)
.|.++.+|..+|..+...|++++|+++|+++++.+|++..++..+|.+|...|++++|++.++++++.+|++..+++++|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la 91 (133)
T 2lni_A 12 NPDLALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKA 91 (133)
T ss_dssp SSCHHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchhhc
Q 026642 223 RYVSMTLQIQ 232 (235)
Q Consensus 223 ~~~~~~~~~~ 232 (235)
.++.+.++..
T Consensus 92 ~~~~~~~~~~ 101 (133)
T 2lni_A 92 AALEAMKDYT 101 (133)
T ss_dssp HHHHHTTCHH
T ss_pred HHHHHHhhHH
Confidence 9999887754
No 99
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.40 E-value=4e-12 Score=106.36 Aligned_cols=111 Identities=15% Similarity=0.040 Sum_probs=99.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhhCCCCHHHH--
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRN---VEALKVVMQGNMR--------RGRNKEALEFVKRLIDIEPNEVEWK-- 184 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P~~---~~a~~~la~~~~~--------~g~~~eAi~~l~kai~l~P~~~~a~-- 184 (235)
.+.......+++++|+..|+++++.+|++ .+++..+|.++.. .|++++|+..|+++++.+|++..++
T Consensus 57 ~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a 136 (261)
T 3qky_A 57 YLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDA 136 (261)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCchhHHHH
Confidence 34445556778999999999999998754 6899999999999 9999999999999999999987666
Q ss_pred ---------------HHHHHHHHHcCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHhhc
Q 026642 185 ---------------LLQALCYELMGKLSTAKRLFKDILKERPLL---LRALHDLGRYVSMT 228 (235)
Q Consensus 185 ---------------~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~---~~a~~~l~~~~~~~ 228 (235)
+.+|.+|...|++++|+..|+++++.+|++ ..+++.+|.+|.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~ 198 (261)
T 3qky_A 137 TQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAY 198 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHh
Confidence 888999999999999999999999999995 68999999999866
No 100
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.38 E-value=2.8e-13 Score=119.29 Aligned_cols=105 Identities=17% Similarity=0.111 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE---------------VEWKLLQALCYEL 193 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~---------------~~a~~~lA~~~~~ 193 (235)
+++|++.|+++++.+|+++.++..+|.++++.|++++|+.+|+++++++|++ ..+++++|.+|..
T Consensus 129 ~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~ 208 (336)
T 1p5q_A 129 FEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLK 208 (336)
T ss_dssp EECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888889999999999999999999999999999999999999999 6999999999999
Q ss_pred cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 194 ~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+|++++|+..|+++++++|++..+++++|.+|.+.++..+
T Consensus 209 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~ 248 (336)
T 1p5q_A 209 LQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFEL 248 (336)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHH
Confidence 9999999999999999999999999999999998887543
No 101
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.38 E-value=3e-12 Score=105.53 Aligned_cols=97 Identities=11% Similarity=0.059 Sum_probs=86.4
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH---HHHHHHHHHHH--
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRN---VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE---WKLLQALCYEL-- 193 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~---~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~---a~~~lA~~~~~-- 193 (235)
.....+++++|+..|+++++.+|++ .+++..+|.+|.+.|++++|++.|+++++.+|++.. +++.+|.++..
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~ 92 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALD 92 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhh
Confidence 3344567999999999999999887 479999999999999999999999999999999864 88999999987
Q ss_pred ----------------cCCHHHHHHHHHHHHHHCCCCHHHH
Q 026642 194 ----------------MGKLSTAKRLFKDILKERPLLLRAL 218 (235)
Q Consensus 194 ----------------~g~~~~A~~~l~kaL~~~P~~~~a~ 218 (235)
.|++++|+..|+++++.+|++..++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~ 133 (225)
T 2yhc_A 93 DSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTT 133 (225)
T ss_dssp C--------------CCHHHHHHHHHHHHHHTTCTTCTTHH
T ss_pred hhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHH
Confidence 5799999999999999999996444
No 102
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.38 E-value=5e-12 Score=104.19 Aligned_cols=115 Identities=13% Similarity=0.062 Sum_probs=100.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHHhhC
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVE---ALKVVMQGNMR------------------RGRNKEALEFVKRLIDIE 177 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~---a~~~la~~~~~------------------~g~~~eAi~~l~kai~l~ 177 (235)
+.......+++++|+..|+++++.+|++.. ++..+|.++.. .|++++|+..|+++++.+
T Consensus 47 lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~ 126 (225)
T 2yhc_A 47 LIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGY 126 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHC
Confidence 344555567899999999999999999875 89999999886 579999999999999999
Q ss_pred CCCHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH---HHHHHHHHHHhhchhhcc
Q 026642 178 PNEVEWK-----------------LLQALCYELMGKLSTAKRLFKDILKERPLLL---RALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 178 P~~~~a~-----------------~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~---~a~~~l~~~~~~~~~~~~ 233 (235)
|++..++ +.+|.+|...|++++|+..|+++++.+|++. .+++.+|.+|.+.++..+
T Consensus 127 P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~ 202 (225)
T 2yhc_A 127 PNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQ 202 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHH
Confidence 9987654 5789999999999999999999999999984 789999999999887543
No 103
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.38 E-value=6.3e-12 Score=90.52 Aligned_cols=87 Identities=14% Similarity=0.119 Sum_probs=82.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYV 225 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~ 225 (235)
.++++..+|..+...|++++|+..++++++.+|+++.++..+|.++...|++++|+..++++++.+|++..++..+|.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~ 82 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhhc
Q 026642 226 SMTLQIQ 232 (235)
Q Consensus 226 ~~~~~~~ 232 (235)
.+.++..
T Consensus 83 ~~~~~~~ 89 (118)
T 1elw_A 83 EFLNRFE 89 (118)
T ss_dssp HHTTCHH
T ss_pred HHHhhHH
Confidence 8887644
No 104
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.37 E-value=1e-11 Score=105.92 Aligned_cols=103 Identities=14% Similarity=-0.036 Sum_probs=50.0
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHHHHHH------------HHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP---NEVEWKLLQ------------ALCY 191 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P---~~~~a~~~l------------A~~~ 191 (235)
+++++|+..|+++++.+|++..++..+|.++...|++++|+..|+++++.+| ++..++..+ |.++
T Consensus 51 ~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~ 130 (359)
T 3ieg_A 51 GKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADEMQRLRSQALDA 130 (359)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345555555555555555555555555555555555555555555555555 444444333 3444
Q ss_pred HHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhch
Q 026642 192 ELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTL 229 (235)
Q Consensus 192 ~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~ 229 (235)
...|++++|++.++++++.+|++..++..+|.++.+.+
T Consensus 131 ~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (359)
T 3ieg_A 131 FDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEG 168 (359)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCC
Confidence 44444444444444444444444444444444444443
No 105
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.37 E-value=3.2e-12 Score=102.03 Aligned_cols=87 Identities=10% Similarity=-0.084 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------CHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHHH----
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-------EVE-----WKLLQALCYELMGKLSTAKRLFKDILKE---- 210 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~-------~~~-----a~~~lA~~~~~~g~~~~A~~~l~kaL~~---- 210 (235)
++.+..+|..+++.|+|++|+++|+++++++|+ +.. +|.++|.++..+|+|++|+..|+++|++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 578899999999999999999999999999999 544 9999999999999999999999999999
Q ss_pred ---CCCCHHHH----HHHHHHHhhchhhcc
Q 026642 211 ---RPLLLRAL----HDLGRYVSMTLQIQS 233 (235)
Q Consensus 211 ---~P~~~~a~----~~l~~~~~~~~~~~~ 233 (235)
+|++..+| +++|.++.+.++.++
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eE 120 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAE 120 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHH
Confidence 99999999 999999999887654
No 106
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.36 E-value=2.1e-11 Score=89.09 Aligned_cols=94 Identities=21% Similarity=0.294 Sum_probs=87.9
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A 200 (235)
......+++++|+..++++++.+|++..++..+|.++...|++++|+++++++++.+|++..++..+|.++...|++++|
T Consensus 43 ~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A 122 (136)
T 2fo7_A 43 NAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEA 122 (136)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHH
Confidence 33344567999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCC
Q 026642 201 KRLFKDILKERPLL 214 (235)
Q Consensus 201 ~~~l~kaL~~~P~~ 214 (235)
.+.++++++.+|++
T Consensus 123 ~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 123 IEYYQKALELDPRS 136 (136)
T ss_dssp HHHHHHHHHHSTTC
T ss_pred HHHHHHHHccCCCC
Confidence 99999999999874
No 107
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=5.9e-12 Score=94.86 Aligned_cols=91 Identities=12% Similarity=0.084 Sum_probs=86.1
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHH
Q 026642 142 KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE---VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218 (235)
Q Consensus 142 ~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~---~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~ 218 (235)
.+|.+++.+..+|..+...|++++|+++|+++++.+|++ ..++..+|.+|...|++++|++.++++++.+|++..++
T Consensus 23 ~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~ 102 (148)
T 2dba_A 23 PGASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKAL 102 (148)
T ss_dssp TTCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHH
T ss_pred cchHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHH
Confidence 467899999999999999999999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHhhchhhc
Q 026642 219 HDLGRYVSMTLQIQ 232 (235)
Q Consensus 219 ~~l~~~~~~~~~~~ 232 (235)
+.+|.++.+.++..
T Consensus 103 ~~~a~~~~~~~~~~ 116 (148)
T 2dba_A 103 YRRSQALEKLGRLD 116 (148)
T ss_dssp HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHcCCHH
Confidence 99999998877654
No 108
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.36 E-value=1e-11 Score=107.13 Aligned_cols=94 Identities=13% Similarity=0.098 Sum_probs=88.2
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH-HHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST-AKRLF 204 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~-A~~~l 204 (235)
.+++++|+..|+++++.+|+++.+|..+|.++.+.|++++|++.|+++++++|++++++.++|.++...|++++ +.+++
T Consensus 179 ~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~ 258 (291)
T 3mkr_A 179 GEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYL 258 (291)
T ss_dssp TTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999976 56889
Q ss_pred HHHHHHCCCCHHHHH
Q 026642 205 KDILKERPLLLRALH 219 (235)
Q Consensus 205 ~kaL~~~P~~~~a~~ 219 (235)
+++++.+|+++.+..
T Consensus 259 ~~~~~~~P~~~~~~d 273 (291)
T 3mkr_A 259 SQLKDAHRSHPFIKE 273 (291)
T ss_dssp HHHHHHCTTCHHHHH
T ss_pred HHHHHhCCCChHHHH
Confidence 999999999976653
No 109
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.36 E-value=6.5e-12 Score=114.04 Aligned_cols=107 Identities=15% Similarity=0.091 Sum_probs=94.6
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
.+++++|++.|+++++.+|++++++..+|.++...|++++|+++++++++.+|++..++..+|.+|...|++++|++.|+
T Consensus 289 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 368 (537)
T 3fp2_A 289 KENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFN 368 (537)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 206 DILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++++.+|++..++..+|.++.+.++..
T Consensus 369 ~~~~~~~~~~~~~~~l~~~~~~~g~~~ 395 (537)
T 3fp2_A 369 ETKLKFPTLPEVPTFFAEILTDRGDFD 395 (537)
T ss_dssp HHHHHCTTCTHHHHHHHHHHHHTTCHH
T ss_pred HHHHhCCCChHHHHHHHHHHHHhCCHH
Confidence 999999999888888888888877643
No 110
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.36 E-value=1.3e-11 Score=113.78 Aligned_cols=112 Identities=13% Similarity=0.015 Sum_probs=88.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTA 200 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A 200 (235)
......+++++|++.|+++++.+|++.++|..++.+|.+.|++++|++.|+++++.+|++..++..+|.+|...|++++|
T Consensus 381 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 460 (597)
T 2xpi_A 381 IYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLA 460 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHH
Confidence 33444566788888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 201 KRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 201 ~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++.|+++++.+|++..+|..++.+|.+.++.+
T Consensus 461 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 492 (597)
T 2xpi_A 461 NEYLQSSYALFQYDPLLLNELGVVAFNKSDMQ 492 (597)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHhCCHH
Confidence 88888888888888888888888877776643
No 111
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.36 E-value=3.8e-12 Score=93.16 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=85.8
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHH
Q 026642 142 KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221 (235)
Q Consensus 142 ~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l 221 (235)
.+|+++.++..+|..+...|++++|++.++++++.+|+++.++..+|.++...|++++|++.++++++.+|++..+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~ 86 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRM 86 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHH
Confidence 35567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhhc
Q 026642 222 GRYVSMTLQIQ 232 (235)
Q Consensus 222 ~~~~~~~~~~~ 232 (235)
|.++.+.++..
T Consensus 87 ~~~~~~~~~~~ 97 (131)
T 2vyi_A 87 GLALSSLNKHV 97 (131)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhCCHH
Confidence 99998887754
No 112
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.36 E-value=9.6e-12 Score=110.62 Aligned_cols=104 Identities=22% Similarity=0.194 Sum_probs=95.9
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.......+++++|+..|+++++.+|+++.+|..+|.++...|++++|+.+++++++++|++..++..+|.+|...|++++
T Consensus 33 ~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 112 (450)
T 2y4t_A 33 GKKLLAAGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDE 112 (450)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHH
Confidence 33444566799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHCCCCH---HHHHHHHH
Q 026642 200 AKRLFKDILKERPLLL---RALHDLGR 223 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~---~a~~~l~~ 223 (235)
|++.|+++++.+|++. .++..++.
T Consensus 113 A~~~~~~~~~~~~~~~~~~~~~~~l~~ 139 (450)
T 2y4t_A 113 AEDDFKKVLKSNPSENEEKEAQSQLIK 139 (450)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCChhhHHHHHHHHH
Confidence 9999999999999998 77766643
No 113
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.36 E-value=3.5e-12 Score=99.47 Aligned_cols=88 Identities=18% Similarity=0.219 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDI------------------EPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l------------------~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
.++.+..+|..+++.|+|++|+..|++++++ +|.+..++.++|.+|..+|+|++|+..++++
T Consensus 10 ~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~a 89 (162)
T 3rkv_A 10 SVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEV 89 (162)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 4678999999999999999999999999999 7777899999999999999999999999999
Q ss_pred HHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 208 LKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 208 L~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
++++|++..+|+.+|.+|...++..+
T Consensus 90 l~~~p~~~~a~~~~g~~~~~~g~~~~ 115 (162)
T 3rkv_A 90 LKREETNEKALFRRAKARIAAWKLDE 115 (162)
T ss_dssp HHHSTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HhcCCcchHHHHHHHHHHHHHhcHHH
Confidence 99999999999999999999887543
No 114
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.35 E-value=3.2e-11 Score=107.25 Aligned_cols=115 Identities=14% Similarity=-0.018 Sum_probs=97.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHH--------
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV---EWKLLQ-------- 187 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~---~a~~~l-------- 187 (235)
+.......+++++|+..|+++++.+|++..++..+|.+|...|++++|+++|+++++++|++. .++..+
T Consensus 66 l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 145 (450)
T 2y4t_A 66 RATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQR 145 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHH
Confidence 344445567789999999999999999999999999999999999999999999999999887 766555
Q ss_pred ----HHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 188 ----ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 188 ----A~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
|.++...|++++|+..|+++++.+|++..++..+|.+|.+.++..+
T Consensus 146 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 195 (450)
T 2y4t_A 146 LRSQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKEGEPRK 195 (450)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHCCCHHH
Confidence 6668899999999999999999999999999999988888777544
No 115
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.34 E-value=1.9e-11 Score=88.69 Aligned_cols=90 Identities=21% Similarity=0.285 Sum_probs=82.8
Q ss_pred CCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHH
Q 026642 143 EPRN-VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221 (235)
Q Consensus 143 ~P~~-~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l 221 (235)
+|.+ ..++..+|.++...|++++|++.++++++.+|++..++..+|.++...|++++|+..++++++.+|++..++..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l 83 (125)
T 1na0_A 4 DPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNL 83 (125)
T ss_dssp ---CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHH
Confidence 4555 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhchhhc
Q 026642 222 GRYVSMTLQIQ 232 (235)
Q Consensus 222 ~~~~~~~~~~~ 232 (235)
+.++.+.++..
T Consensus 84 a~~~~~~~~~~ 94 (125)
T 1na0_A 84 GNAYYKQGDYD 94 (125)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhcCHH
Confidence 99998877643
No 116
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.34 E-value=2.8e-11 Score=111.58 Aligned_cols=111 Identities=6% Similarity=-0.103 Sum_probs=83.1
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCC-HHHHHHHHHHHHHc
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI------EPNE-VEWKLLQALCYELM 194 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l------~P~~-~~a~~~lA~~~~~~ 194 (235)
.....+++++|++.|+++++.+|+++.+|..+|.+|.+.|++++|++.|+++++. +|++ ..+|..+|.+|...
T Consensus 450 ~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~ 529 (597)
T 2xpi_A 450 QHMQLGNILLANEYLQSSYALFQYDPLLLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEKPWAATWANLGHAYRKL 529 (597)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSGGGHHHHHHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHHHHh
Confidence 3344556777777777777777777777777777777778888888888777777 5554 67777777778788
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 195 GKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 195 g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
|++++|++.|+++++.+|++..+|..++.+|.+.++.+
T Consensus 530 g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~ 567 (597)
T 2xpi_A 530 KMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPG 567 (597)
T ss_dssp TCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHH
T ss_pred cCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHH
Confidence 88888888888877777777777777777777766643
No 117
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.33 E-value=8.4e-12 Score=92.51 Aligned_cols=86 Identities=16% Similarity=0.191 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC---HHHHHHH
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV---EWKLLQALCYELMGKLSTAKRLFKDILKERPLL---LRALHDL 221 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~---~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~---~~a~~~l 221 (235)
+++..+|..++..|++++|++.|+++++.+|+++ .+++.+|.++...|++++|++.|+++++.+|++ ..+++.+
T Consensus 3 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~l 82 (129)
T 2xev_A 3 RTAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKL 82 (129)
T ss_dssp CCHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHH
Confidence 4678899999999999999999999999999998 899999999999999999999999999999999 8999999
Q ss_pred HHHHhhchhhcc
Q 026642 222 GRYVSMTLQIQS 233 (235)
Q Consensus 222 ~~~~~~~~~~~~ 233 (235)
|.++.+.++..+
T Consensus 83 a~~~~~~g~~~~ 94 (129)
T 2xev_A 83 GLSQYGEGKNTE 94 (129)
T ss_dssp HHHHHHTTCHHH
T ss_pred HHHHHHcCCHHH
Confidence 999998877543
No 118
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.32 E-value=8.8e-12 Score=106.80 Aligned_cols=90 Identities=19% Similarity=0.098 Sum_probs=86.0
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q 026642 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGR 223 (235)
Q Consensus 144 P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~ 223 (235)
|++++++..+|..+...|++++|+..|+++++++|+++.++.++|.+|..+|++++|++.|+++++++|++..+++++|.
T Consensus 1 p~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 80 (281)
T 2c2l_A 1 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQ 80 (281)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchhhcc
Q 026642 224 YVSMTLQIQS 233 (235)
Q Consensus 224 ~~~~~~~~~~ 233 (235)
+|.+.++..+
T Consensus 81 ~~~~~g~~~~ 90 (281)
T 2c2l_A 81 CQLEMESYDE 90 (281)
T ss_dssp HHHHTTCHHH
T ss_pred HHHHcCCHHH
Confidence 9998877543
No 119
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.31 E-value=6.4e-13 Score=121.84 Aligned_cols=105 Identities=14% Similarity=0.100 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC---------------HHHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE---------------VEWKLLQALCYEL 193 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~---------------~~a~~~lA~~~~~ 193 (235)
+++|++.|+.+++.+|+++.+|..+|..+++.|+|++|+.+|+++++++|++ ..+|+++|.+|..
T Consensus 250 ~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~ 329 (457)
T 1kt0_A 250 FEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLK 329 (457)
T ss_dssp EECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888899999999999999999999999999999999999998 7999999999999
Q ss_pred cCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 194 MGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 194 ~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+|+|++|+..|+++++++|++..+|+++|.+|.+.++.++
T Consensus 330 ~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~ 369 (457)
T 1kt0_A 330 LREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFES 369 (457)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHH
T ss_pred hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHH
Confidence 9999999999999999999999999999999998887543
No 120
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.31 E-value=1.5e-12 Score=104.79 Aligned_cols=92 Identities=18% Similarity=0.112 Sum_probs=84.4
Q ss_pred HhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH----------------HHHHHHHHHHHHcCCHHHHHHHH
Q 026642 141 EKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV----------------EWKLLQALCYELMGKLSTAKRLF 204 (235)
Q Consensus 141 ~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~----------------~a~~~lA~~~~~~g~~~~A~~~l 204 (235)
+..+..++.+..+|..++..|+|++|+++|++++++.|+++ .++..+|.+|..+|++++|+..+
T Consensus 32 ~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~ 111 (198)
T 2fbn_A 32 EEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHA 111 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 33345578899999999999999999999999999999987 89999999999999999999999
Q ss_pred HHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 205 KDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 205 ~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+++++.+|++..+++++|.+|.+.++..
T Consensus 112 ~~al~~~p~~~~~~~~lg~~~~~~~~~~ 139 (198)
T 2fbn_A 112 SKVLKIDKNNVKALYKLGVANMYFGFLE 139 (198)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHcccHH
Confidence 9999999999999999999998887754
No 121
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.31 E-value=1.3e-11 Score=106.28 Aligned_cols=95 Identities=11% Similarity=0.085 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLE-KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-WKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 130 ~eA~~~~e~aL~-~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~-a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
++|+..|+++++ .+|++..+|..+|.++...|++++|++.|+++++++|+++. +|..+|.++...|++++|++.|+++
T Consensus 81 ~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 160 (308)
T 2ond_A 81 DEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA 160 (308)
T ss_dssp HHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 555555555555 45555555555555555555555555555555555555554 5555555555555555555555555
Q ss_pred HHHCCCCHHHHHHHHHH
Q 026642 208 LKERPLLLRALHDLGRY 224 (235)
Q Consensus 208 L~~~P~~~~a~~~l~~~ 224 (235)
++.+|.+..+|.+.+.+
T Consensus 161 ~~~~p~~~~~~~~~a~~ 177 (308)
T 2ond_A 161 REDARTRHHVYVTAALM 177 (308)
T ss_dssp HTSTTCCTHHHHHHHHH
T ss_pred HhcCCCCHHHHHHHHHH
Confidence 55555555555544444
No 122
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.30 E-value=9.4e-12 Score=91.23 Aligned_cols=88 Identities=13% Similarity=0.153 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-------HHH
Q 026642 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL-------LRA 217 (235)
Q Consensus 145 ~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~-------~~a 217 (235)
..++++..+|..+...|++++|+.+++++++.+|+++.++..+|.+|...|++++|+..++++++.+|++ ..+
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 81 (131)
T 1elr_A 2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKA 81 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHH
Confidence 3468899999999999999999999999999999999999999999999999999999999999999887 899
Q ss_pred HHHHHHHHhhchhhc
Q 026642 218 LHDLGRYVSMTLQIQ 232 (235)
Q Consensus 218 ~~~l~~~~~~~~~~~ 232 (235)
++++|.++.+.++..
T Consensus 82 ~~~la~~~~~~~~~~ 96 (131)
T 1elr_A 82 YARIGNSYFKEEKYK 96 (131)
T ss_dssp HHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhccHH
Confidence 999999998887754
No 123
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.29 E-value=3.9e-11 Score=92.01 Aligned_cols=88 Identities=11% Similarity=0.096 Sum_probs=83.2
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYV 225 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~ 225 (235)
.++.+..+|..+...|++++|+.+|+++++.+|++..++..+|.++...|++++|++.++++++.+|++..+++++|.++
T Consensus 12 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~ 91 (166)
T 1a17_A 12 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 91 (166)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhhcc
Q 026642 226 SMTLQIQS 233 (235)
Q Consensus 226 ~~~~~~~~ 233 (235)
.+.++..+
T Consensus 92 ~~~~~~~~ 99 (166)
T 1a17_A 92 MALGKFRA 99 (166)
T ss_dssp HHTTCHHH
T ss_pred HHhccHHH
Confidence 88877543
No 124
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=99.29 E-value=3.7e-11 Score=103.48 Aligned_cols=114 Identities=16% Similarity=0.052 Sum_probs=96.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH-cC
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNVE-ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL-MG 195 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~-a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~-~g 195 (235)
.+..-....+++++|++.|+++++.+|++.+ +|..+|..+.+.|++++|+..|+++++.+|.+..+|...|.+... .|
T Consensus 104 ~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~ 183 (308)
T 2ond_A 104 AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSK 183 (308)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcC
Confidence 3444445567789999999999999999987 999999999999999999999999999999888888777766543 69
Q ss_pred CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 196 KLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
++++|++.|+++++.+|++..+|.+++.++.+.++.
T Consensus 184 ~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~ 219 (308)
T 2ond_A 184 DKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNED 219 (308)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCH
T ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCH
Confidence 999999999999999999999999999888776654
No 125
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.28 E-value=3.2e-11 Score=109.42 Aligned_cols=110 Identities=10% Similarity=0.109 Sum_probs=103.6
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~ 201 (235)
.....+++++|++.|+++++.+|+ .+++..+|.++...|++++|+++++++++.+|+++.++..+|.+|...|++++|+
T Consensus 252 ~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~ 330 (537)
T 3fp2_A 252 FHFLKNNLLDAQVLLQESINLHPT-PNSYIFLALTLADKENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAK 330 (537)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHTCCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHhcccHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHH
Confidence 334456789999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 202 RLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 202 ~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+.|+++++.+|++..++.++|.++.+.++..
T Consensus 331 ~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~ 361 (537)
T 3fp2_A 331 EDFQKAQSLNPENVYPYIQLACLLYKQGKFT 361 (537)
T ss_dssp HHHHHHHHHCTTCSHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999999998887754
No 126
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.25 E-value=1.8e-11 Score=100.99 Aligned_cols=114 Identities=19% Similarity=0.188 Sum_probs=100.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEK--------EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI--------EPNEVE 182 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~--------~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l--------~P~~~~ 182 (235)
+.......+++++|+..|+++++. +|....++..+|.+|...|++++|++++++++++ +|....
T Consensus 49 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 128 (283)
T 3edt_B 49 LALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAK 128 (283)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHH
Confidence 334444566799999999999987 4677889999999999999999999999999998 567788
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHhhchhhc
Q 026642 183 WKLLQALCYELMGKLSTAKRLFKDILKE--------RPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 183 a~~~lA~~~~~~g~~~~A~~~l~kaL~~--------~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++..+|.+|...|++++|++.|+++++. +|....++.++|.+|.+.++.+
T Consensus 129 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 186 (283)
T 3edt_B 129 QLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQ 186 (283)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999999999999 7777899999999998887754
No 127
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.25 E-value=3e-11 Score=108.66 Aligned_cols=103 Identities=16% Similarity=0.059 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH------HHHHHHHHHHH---cCCHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE------WKLLQALCYEL---MGKLS 198 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~------a~~~lA~~~~~---~g~~~ 198 (235)
++++|+..|+++++.+|++++++..+|.++...|++++|+.+++++++.+|++.. ++..+|.++.. .|+++
T Consensus 353 ~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 432 (514)
T 2gw1_A 353 KFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFI 432 (514)
T ss_dssp CHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHH
T ss_pred CHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHH
Confidence 3455555555555555555555555555555555555555555555555554433 55555555555 55555
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 199 TAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
+|+..|+++++.+|++..++..+|.++.+.++
T Consensus 433 ~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 464 (514)
T 2gw1_A 433 EATNLLEKASKLDPRSEQAKIGLAQMKLQQED 464 (514)
T ss_dssp HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCcccHHHHHHHHHHHHHhcC
Confidence 55555555555555555555555555555444
No 128
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.25 E-value=3.6e-11 Score=103.04 Aligned_cols=110 Identities=7% Similarity=-0.088 Sum_probs=95.0
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC------HHHHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRN------VEALKVVMQGNMRR-GRNKEALEFVKRLIDIEPNE------VEWKLLQAL 189 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~------~~a~~~la~~~~~~-g~~~eAi~~l~kai~l~P~~------~~a~~~lA~ 189 (235)
....+++++|+..|+++++..+.. +.++..+|.+|... |++++|+.+|++++++.|++ ..++..+|.
T Consensus 87 ~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~ 166 (292)
T 1qqe_A 87 FKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCAD 166 (292)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 344567999999999999987643 57899999999996 99999999999999998864 567889999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHCCCCHH-------HHHHHHHHHhhchhhc
Q 026642 190 CYELMGKLSTAKRLFKDILKERPLLLR-------ALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 190 ~~~~~g~~~~A~~~l~kaL~~~P~~~~-------a~~~l~~~~~~~~~~~ 232 (235)
+|..+|++++|+..|+++++..|++.. ++.++|.++...++..
T Consensus 167 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 216 (292)
T 1qqe_A 167 LKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAV 216 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHH
Confidence 999999999999999999999998732 6789999988876643
No 129
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.25 E-value=3.3e-12 Score=92.12 Aligned_cols=86 Identities=9% Similarity=0.115 Sum_probs=78.5
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcC
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALCYELMG 195 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~~~~~g 195 (235)
.....+++++|++.|+++++.+|+++.+|..+|.++...|++++|+++++++++++|++ ..+++.+|.++..+|
T Consensus 13 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~ 92 (111)
T 2l6j_A 13 SLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVG 92 (111)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 33445679999999999999999999999999999999999999999999999999999 899999999999999
Q ss_pred CHHHHHHHHHHH
Q 026642 196 KLSTAKRLFKDI 207 (235)
Q Consensus 196 ~~~~A~~~l~ka 207 (235)
++++|+..++++
T Consensus 93 ~~~~a~~~~~~~ 104 (111)
T 2l6j_A 93 SVQIPVVEVDEL 104 (111)
T ss_dssp CCCCCSSSSSSC
T ss_pred hHhhhHhHHHHh
Confidence 998888776553
No 130
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.24 E-value=9.2e-11 Score=83.50 Aligned_cols=68 Identities=15% Similarity=0.207 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHH
Q 026642 151 KVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE-WKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218 (235)
Q Consensus 151 ~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~-a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~ 218 (235)
..+|..+...|++++|++.|+++++.+|+++. +++.+|.+|..+|++++|++.|+++++.+|++..++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHH
Confidence 45677777777777777777777777777777 777777777777777777777777777777776655
No 131
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.21 E-value=5.5e-11 Score=106.92 Aligned_cols=100 Identities=12% Similarity=0.050 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
++++|+..|+++++.+|++..++..+|.++...|++++|+++++++++.+|+++.++..+|.++...|++++|++.|+++
T Consensus 319 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a 398 (514)
T 2gw1_A 319 NYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPEAPEVPNFFAEILTDKNDFDKALKQYDLA 398 (514)
T ss_dssp CTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 34445555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred HHHCCCCHH------HHHHHHHHHhh
Q 026642 208 LKERPLLLR------ALHDLGRYVSM 227 (235)
Q Consensus 208 L~~~P~~~~------a~~~l~~~~~~ 227 (235)
++.+|++.. ++..+|.++.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~l~~~~~~ 424 (514)
T 2gw1_A 399 IELENKLDGIYVGIAPLVGKATLLTR 424 (514)
T ss_dssp HHHHHTSSSCSSCSHHHHHHHHHHHT
T ss_pred HHhhhccchHHHHHHHHHHHHHHHhh
Confidence 554444422 44444444444
No 132
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.20 E-value=5.2e-10 Score=93.67 Aligned_cols=96 Identities=10% Similarity=0.035 Sum_probs=69.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR----RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL----MGKL 197 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~----~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~----~g~~ 197 (235)
.+++++|++.|+++++.+ +++++..+|.+|.. .+++++|+++|+++++.+ ++.+++.+|.+|.. .|++
T Consensus 55 ~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~ 130 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDF 130 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHCC--CHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCH
Confidence 556677777777777764 67777777777777 777777777777777763 67777777777777 7777
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
++|++.|+++++.+ +..++.+++.+|..
T Consensus 131 ~~A~~~~~~a~~~~--~~~a~~~lg~~~~~ 158 (273)
T 1ouv_A 131 KKAVEYFTKACDLN--DGDGCTILGSLYDA 158 (273)
T ss_dssp HHHHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--cHHHHHHHHHHHHc
Confidence 77777777777665 56677777777766
No 133
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.19 E-value=4e-11 Score=85.44 Aligned_cols=83 Identities=12% Similarity=0.134 Sum_probs=75.3
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVE-ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKR 202 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~-a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~ 202 (235)
...+++++|++.|+++++.+|+++. ++..+|.+|...|++++|+++|+++++++|++..++.. +.+++|..
T Consensus 11 ~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~ 82 (99)
T 2kc7_A 11 INQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILN 82 (99)
T ss_dssp HHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHH
Confidence 3456699999999999999999999 99999999999999999999999999999999988754 66788899
Q ss_pred HHHHHHHHCCCC
Q 026642 203 LFKDILKERPLL 214 (235)
Q Consensus 203 ~l~kaL~~~P~~ 214 (235)
.|++++..+|++
T Consensus 83 ~~~~~~~~~p~~ 94 (99)
T 2kc7_A 83 FYNKDMYNQLEH 94 (99)
T ss_dssp HHCCTTHHHHCC
T ss_pred HHHHHhccCccc
Confidence 999998888876
No 134
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=99.19 E-value=7.5e-11 Score=97.20 Aligned_cols=92 Identities=26% Similarity=0.339 Sum_probs=82.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEK--------EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI--------EPNEVE 182 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~--------~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l--------~P~~~~ 182 (235)
+..-....+++++|++.|+++++. +|....++..+|.++...|++++|++++++++++ +|....
T Consensus 91 l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 170 (283)
T 3edt_B 91 LAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAK 170 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHH
Confidence 334444567789999999999988 5778899999999999999999999999999999 777788
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 183 WKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 183 a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
++..+|.+|..+|++++|++.|+++++.
T Consensus 171 ~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 171 TKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999986
No 135
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.18 E-value=6e-11 Score=101.67 Aligned_cols=108 Identities=9% Similarity=-0.026 Sum_probs=93.6
Q ss_pred hcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHH
Q 026642 125 ALMGKSEVEEMFEKLLEKEPR------NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALCYE 192 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~------~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~~~ 192 (235)
..+++++|++.|+++++..+. .+.++..+|.+|...|++++|+.+|++++++.+.. ..++..+|.+|.
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~ 128 (292)
T 1qqe_A 49 LRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILE 128 (292)
T ss_dssp HTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 456789999999999987432 26799999999999999999999999999998753 568889999999
Q ss_pred Hc-CCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchhhc
Q 026642 193 LM-GKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 193 ~~-g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~~~ 232 (235)
.. |++++|+..|++++++.|++ ..++.++|.++.+.++..
T Consensus 129 ~~lg~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 175 (292)
T 1qqe_A 129 NDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYI 175 (292)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HhhcCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHH
Confidence 96 99999999999999998865 567899999998887654
No 136
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.17 E-value=7.5e-10 Score=99.24 Aligned_cols=109 Identities=14% Similarity=0.003 Sum_probs=88.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHHh---------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEK---------EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE--------PNEVEW 183 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~---------~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~--------P~~~~a 183 (235)
.-....+++++|++.|+++++. +|....+|.++|.+|..+|++++|+.++++++++. ++.+..
T Consensus 59 ~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~ 138 (472)
T 4g1t_A 59 YLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPEL 138 (472)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHH
Confidence 3344556789999999998875 67788889999999999999999999999998863 356788
Q ss_pred HHHHHHHHHHc--CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhch
Q 026642 184 KLLQALCYELM--GKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTL 229 (235)
Q Consensus 184 ~~~lA~~~~~~--g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~ 229 (235)
+..+|.++... ++|++|+++|+++++.+|+++.++.+++.++.+.+
T Consensus 139 ~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~~~~~~~~~~~~~~l~ 186 (472)
T 4g1t_A 139 DCEEGWTRLKCGGNQNERAKVCFEKALEKKPKNPEFTSGLAIASYRLD 186 (472)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 88888777665 46899999999999999999999988888765543
No 137
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.16 E-value=1.7e-10 Score=91.16 Aligned_cols=80 Identities=20% Similarity=0.188 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE--VEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~--~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
.+|++.++++++.+|++++++..+|.++...|++++|+..|+++++++|+. ..++..+|.++..+|++++|+..|+++
T Consensus 91 ~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~a 170 (176)
T 2r5s_A 91 SPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQ 170 (176)
T ss_dssp CHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 357999999999999999999999999999999999999999999999986 669999999999999999999999998
Q ss_pred HH
Q 026642 208 LK 209 (235)
Q Consensus 208 L~ 209 (235)
|.
T Consensus 171 l~ 172 (176)
T 2r5s_A 171 LY 172 (176)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 138
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=99.16 E-value=1.8e-10 Score=101.31 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=99.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNV----EALKVVMQGNMRRGRNKEALEFVKRLIDI------EPNEVEWKLLQALC 190 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~----~a~~~la~~~~~~g~~~eAi~~l~kai~l------~P~~~~a~~~lA~~ 190 (235)
......+++++|++.|+++++.+|++. .++..+|.+|...|++++|++++++++++ ++....++..+|.+
T Consensus 56 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~ 135 (411)
T 4a1s_A 56 ERLCNAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNT 135 (411)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHH
Confidence 344556789999999999999999997 58999999999999999999999999998 57778999999999
Q ss_pred HHHcCCHHHHHHHHHHHHHH------CCCCHHHHHHHHHHHhhchh
Q 026642 191 YELMGKLSTAKRLFKDILKE------RPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 191 ~~~~g~~~~A~~~l~kaL~~------~P~~~~a~~~l~~~~~~~~~ 230 (235)
|...|++++|++.|+++++. .+....++.++|.+|...++
T Consensus 136 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 181 (411)
T 4a1s_A 136 LKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKGK 181 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcCc
Confidence 99999999999999999998 56668899999999988876
No 139
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.15 E-value=3.7e-10 Score=101.21 Aligned_cols=99 Identities=13% Similarity=0.093 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMR----RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~----~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
++|++.|+++++.+|++..++..+|..+.. .|++++|+++++++++.+|++..++..+|.+|...|++++|++.|+
T Consensus 192 ~~al~~~~~al~l~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 271 (472)
T 4g1t_A 192 QNAIDPLRQAIRLNPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLK 271 (472)
T ss_dssp CCTHHHHHHHHHHCSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 445555555555555555555555544433 3566778888888888888888888889999999999999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhc
Q 026642 206 DILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
++++.+|++..++.++|.+|...
T Consensus 272 ~al~~~p~~~~~~~~lg~~y~~~ 294 (472)
T 4g1t_A 272 KALEYIPNNAYLHCQIGCCYRAK 294 (472)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCCChHHHHHHHHHHHHHH
Confidence 99999999999999998887654
No 140
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.15 E-value=3.4e-10 Score=96.61 Aligned_cols=108 Identities=7% Similarity=0.027 Sum_probs=92.7
Q ss_pred hcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHH---hhCCCCH----HHHHHHHHHH
Q 026642 125 ALMGKSEVEEMFEKLLEKEPRN------VEALKVVMQGNMRRGRNKEALEFVKRLI---DIEPNEV----EWKLLQALCY 191 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~~------~~a~~~la~~~~~~g~~~eAi~~l~kai---~l~P~~~----~a~~~lA~~~ 191 (235)
..+++++|+..++++++..++. ..++..+|.+|...|++++|+.+|++++ +..+++. .+++++|.+|
T Consensus 127 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y 206 (293)
T 2qfc_A 127 KKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKAL 206 (293)
T ss_dssp TSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHH
Confidence 3457899999999999865444 6799999999999999999999999999 5566643 6889999999
Q ss_pred HHcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchhhc
Q 026642 192 ELMGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 192 ~~~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~~~ 232 (235)
..+|+|++|++.++++++..++. ..+++++|.+|.+.++..
T Consensus 207 ~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~ 253 (293)
T 2qfc_A 207 YLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEE 253 (293)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCH
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcH
Confidence 99999999999999999876431 788999999999887654
No 141
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.15 E-value=7.2e-10 Score=76.84 Aligned_cols=74 Identities=24% Similarity=0.319 Sum_probs=68.7
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG 195 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g 195 (235)
.....+++++|+..|+++++.+|++..++..+|.++...|++++|+++++++++++|++..++..+|.++..+|
T Consensus 18 ~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 18 AYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 33445679999999999999999999999999999999999999999999999999999999999999998765
No 142
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.15 E-value=4.5e-10 Score=106.09 Aligned_cols=99 Identities=10% Similarity=0.049 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC--CH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGR----------NKEALEFVKRLIDIEPNEVEWKLLQALCYELMG--KL 197 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~----------~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g--~~ 197 (235)
++|++.++++++.+|++..+|...+.++...|+ +++|+++++++++.+|++..+|..++.++...| ++
T Consensus 46 eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~ 125 (567)
T 1dce_A 46 ESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNW 125 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCH
T ss_pred HHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccH
Confidence 444555555555555555555555555555444 555555555555555555555555555555555 44
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhhc
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
++|++.++++++.||++..+|..++.++.+.
T Consensus 126 ~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l 156 (567)
T 1dce_A 126 ARELELCARFLEADERNFHCWDYRRFVAAQA 156 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhccccccHHHHHHHHHHHc
Confidence 5555555555555555555555554444443
No 143
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.14 E-value=2.8e-10 Score=82.48 Aligned_cols=72 Identities=11% Similarity=-0.007 Sum_probs=68.6
Q ss_pred CCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Q 026642 143 EPRNVEALKVVMQGNMRRGR---NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 143 ~P~~~~a~~~la~~~~~~g~---~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
+|+|++.+..+|.+++..++ .++|...+++++++||+++.+++.+|.+++..|+|++|+..|+++++.+|.+
T Consensus 2 ~p~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 2 NAVTATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp CCCCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 68999999999999987666 7999999999999999999999999999999999999999999999999985
No 144
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.14 E-value=3.7e-10 Score=96.80 Aligned_cols=91 Identities=15% Similarity=0.113 Sum_probs=80.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH------------------
Q 026642 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF------------------ 204 (235)
Q Consensus 143 ~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l------------------ 204 (235)
-|++.+++..+|..+.+.|++++|+..|+++++++|+++.+++.+|.+|...|++++|+..|
T Consensus 113 lp~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~~~~~~~~~~ 192 (287)
T 3qou_A 113 LPREEELXAQQAMQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQDTRYQGLVAQ 192 (287)
T ss_dssp SCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCSHHHHHHHHH
T ss_pred cCCchhhHHHHHHHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcchHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999876554
Q ss_pred ----------------HHHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 205 ----------------KDILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 205 ----------------~kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+++++.+|++..+++++|.++.+.++.++
T Consensus 193 ~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~ 237 (287)
T 3qou_A 193 IELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEE 237 (287)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHH
Confidence 45577788888888888888887776543
No 145
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.13 E-value=2.5e-11 Score=89.80 Aligned_cols=75 Identities=12% Similarity=0.067 Sum_probs=66.4
Q ss_pred HcCCHHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 159 RRGRNKEALEFVKRLIDI---EPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 159 ~~g~~~eAi~~l~kai~l---~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
..|++++|+.+|++++++ +|+++.+++.+|.+|..+|++++|++.|+++++.+|++..+++++|.++.+.++.++
T Consensus 2 ~~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHH
Confidence 468999999999999999 689999999999999999999999999999999999999999999999998887543
No 146
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.12 E-value=9.4e-10 Score=96.43 Aligned_cols=100 Identities=8% Similarity=-0.072 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHH----HHc---CCHHHH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG--RNKEALEFVKRLIDIEPNEVEWKLLQALCY----ELM---GKLSTA 200 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g--~~~eAi~~l~kai~l~P~~~~a~~~lA~~~----~~~---g~~~~A 200 (235)
++|++.++++|+.+|++..+|...+.++...| +++++++++++++..+|++..+|..++.++ ... ++++++
T Consensus 50 ~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~y~aW~~R~~iL~~~~~~l~~~~~~~~E 129 (306)
T 3dra_A 50 ERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDFDPYRE 129 (306)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHTTTCCCTHHH
T ss_pred HHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCcccHHHHHHHHHHHHHHHHhccccCCHHHH
Confidence 55666666666666666666666666666666 666666666666666666666666666665 444 556666
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHhhch
Q 026642 201 KRLFKDILKERPLLLRALHDLGRYVSMTL 229 (235)
Q Consensus 201 ~~~l~kaL~~~P~~~~a~~~l~~~~~~~~ 229 (235)
++.++++++.+|++..+|...+.++.+.+
T Consensus 130 L~~~~~~l~~~pkny~aW~~R~~vl~~l~ 158 (306)
T 3dra_A 130 FDILEAMLSSDPKNHHVWSYRKWLVDTFD 158 (306)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHhc
Confidence 66666666666666666666655555443
No 147
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=99.10 E-value=3.3e-09 Score=88.70 Aligned_cols=96 Identities=10% Similarity=0.056 Sum_probs=81.9
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR----RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL----MGKL 197 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~----~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~----~g~~ 197 (235)
.+++++|++.|+++++. ++++++..+|.+|.. .|++++|+++|+++++.+ ++.+++.+|.+|.. .+++
T Consensus 91 ~~~~~~A~~~~~~a~~~--~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~ 166 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDL--KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDL 166 (273)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCH
T ss_pred ccCHHHHHHHHHHHHHc--CCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCH
Confidence 66788888899888887 478889999999988 889999999999988876 67888888988888 8899
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
++|++.|+++++. ++..+++.+|.+|..
T Consensus 167 ~~A~~~~~~a~~~--~~~~a~~~lg~~~~~ 194 (273)
T 1ouv_A 167 KKALASYDKACDL--KDSPGCFNAGNMYHH 194 (273)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 9999999988877 467888888888887
No 148
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=99.10 E-value=1.1e-09 Score=86.54 Aligned_cols=98 Identities=9% Similarity=0.033 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG---RNKEALEFVKRLIDIE-P-NEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g---~~~eAi~~l~kai~l~-P-~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
...+++.|++.++.++.+.++.+.+|+.+.+.+ +.++++..++.+++.+ | +..++++++|..|+.+|+|++|+++
T Consensus 14 l~~~~~~y~~e~~~~~~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y 93 (152)
T 1pc2_A 14 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKY 93 (152)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHH
Confidence 467788999999999999999999999999988 6779999999999999 7 5689999999999999999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHh
Q 026642 204 FKDILKERPLLLRALHDLGRYVS 226 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~l~~~~~ 226 (235)
++++|+.+|+|..+......+..
T Consensus 94 ~~~lL~ieP~n~QA~~Lk~~ie~ 116 (152)
T 1pc2_A 94 VRGLLQTEPQNNQAKELERLIDK 116 (152)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHH
Confidence 99999999999777766555543
No 149
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.10 E-value=2.1e-10 Score=96.15 Aligned_cols=114 Identities=18% Similarity=0.188 Sum_probs=99.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEK--------EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE--------PNEVE 182 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~--------~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~--------P~~~~ 182 (235)
+.......+++++|+..|+++++. +|....++..+|.+|...|++++|++++++++++. |....
T Consensus 75 la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~ 154 (311)
T 3nf1_A 75 LALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAK 154 (311)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHH
Confidence 334445567899999999999987 46778899999999999999999999999999984 55678
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH--------CCCCHHHHHHHHHHHhhchhhc
Q 026642 183 WKLLQALCYELMGKLSTAKRLFKDILKE--------RPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 183 a~~~lA~~~~~~g~~~~A~~~l~kaL~~--------~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++..+|.++...|++++|++.|+++++. +|....++..++.++.+.++..
T Consensus 155 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 212 (311)
T 3nf1_A 155 QLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFK 212 (311)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHH
Confidence 8999999999999999999999999998 7777889999999998887754
No 150
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=99.09 E-value=2.9e-10 Score=95.33 Aligned_cols=113 Identities=18% Similarity=0.173 Sum_probs=98.0
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHh--------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEK--------EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI--------EPNEVEW 183 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~--------~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l--------~P~~~~a 183 (235)
.......+++++|+..|+++++. +|....++..+|.+|...|++++|+.++++++++ +|....+
T Consensus 34 ~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 113 (311)
T 3nf1_A 34 VIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAAT 113 (311)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHH
Confidence 33444456789999999999984 7788899999999999999999999999999988 3556788
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHhhchhhc
Q 026642 184 KLLQALCYELMGKLSTAKRLFKDILKER--------PLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 184 ~~~lA~~~~~~g~~~~A~~~l~kaL~~~--------P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+..+|.+|...|++++|++.|+++++.. |....++.++|.++...++..
T Consensus 114 ~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 170 (311)
T 3nf1_A 114 LNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKDHPDVAKQLNNLALLCQNQGKYE 170 (311)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHH
Confidence 9999999999999999999999999884 555888999999998887644
No 151
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=99.07 E-value=7e-10 Score=93.10 Aligned_cols=107 Identities=14% Similarity=0.064 Sum_probs=94.4
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHH
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRN----VEALKVVMQGNMRRGRNKEALEFVKRLIDI------EPNEVEWKLLQALCYEL 193 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~----~~a~~~la~~~~~~g~~~eAi~~l~kai~l------~P~~~~a~~~lA~~~~~ 193 (235)
...+++++|+..|+++++.+|++ ..++..+|.++...|++++|++++++++++ .+....++..+|.+|..
T Consensus 16 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 95 (338)
T 3ro2_A 16 CKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKV 95 (338)
T ss_dssp HHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHH
Confidence 44567999999999999999999 478889999999999999999999999987 45567889999999999
Q ss_pred cCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchh
Q 026642 194 MGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQ 230 (235)
Q Consensus 194 ~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~ 230 (235)
.|++++|++.++++++..+.. ..++..+|.++...++
T Consensus 96 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 138 (338)
T 3ro2_A 96 LGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 138 (338)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCc
Confidence 999999999999999876644 4588899999888776
No 152
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=99.07 E-value=3.7e-10 Score=96.41 Aligned_cols=105 Identities=10% Similarity=0.055 Sum_probs=87.5
Q ss_pred cCCHHHHHHHHHHHHHhCCC--C----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-------CCCCHHHHHHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPR--N----VEALKVVMQGNMRRGRNKEALEFVKRLIDI-------EPNEVEWKLLQALCYE 192 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~--~----~~a~~~la~~~~~~g~~~eAi~~l~kai~l-------~P~~~~a~~~lA~~~~ 192 (235)
.+++++|+..|+++++..+. + ..++..+|.+|...|++++|+.+|+++++. .+....+++++|.+|.
T Consensus 128 ~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~ 207 (293)
T 3u3w_A 128 KVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALY 207 (293)
T ss_dssp SSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 34789999999999986433 2 347999999999999999999999999952 1223467889999999
Q ss_pred HcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchh
Q 026642 193 LMGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQ 230 (235)
Q Consensus 193 ~~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~ 230 (235)
.+|+|++|++.++++++..+.. ..+++++|.+|.+.++
T Consensus 208 ~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~ 251 (293)
T 3u3w_A 208 LDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEY 251 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTC
T ss_pred HHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999876544 7899999999998873
No 153
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=99.06 E-value=1.1e-09 Score=95.29 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=97.2
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHH
Q 026642 120 KEKRDALMGKSEVEEMFEKLLEKEPRNV----EALKVVMQGNMRRGRNKEALEFVKRLIDI------EPNEVEWKLLQAL 189 (235)
Q Consensus 120 ~e~~~~~~~~~eA~~~~e~aL~~~P~~~----~a~~~la~~~~~~g~~~eAi~~l~kai~l------~P~~~~a~~~lA~ 189 (235)
.......+++++|+..|+++++.+|++. .++..+|.++...|++++|+.++++++++ .|....++..+|.
T Consensus 16 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~ 95 (406)
T 3sf4_A 16 GERLCKSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGN 95 (406)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 3444556779999999999999999994 68999999999999999999999999987 3455788999999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchh
Q 026642 190 CYELMGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQ 230 (235)
Q Consensus 190 ~~~~~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~ 230 (235)
+|..+|++++|+..++++++..+.. ..++.++|.+|...++
T Consensus 96 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 142 (406)
T 3sf4_A 96 TLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGK 142 (406)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCC
Confidence 9999999999999999999987754 5688999999988776
No 154
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.06 E-value=3.4e-10 Score=101.18 Aligned_cols=87 Identities=15% Similarity=0.091 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----------------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLID----------------IEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~----------------l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
++.|..+|..+++.|+|++|+++|+++++ ++|.+..+++++|.+|..+|++++|++++++++++
T Consensus 223 a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~ 302 (370)
T 1ihg_A 223 SEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEI 302 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh
Confidence 57799999999999999999999999999 78888999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHhhchhhcc
Q 026642 211 RPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 211 ~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
+|++..+++++|.+|.+.++.++
T Consensus 303 ~p~~~~a~~~lg~~~~~~g~~~e 325 (370)
T 1ihg_A 303 DPSNTKALYRRAQGWQGLKEYDQ 325 (370)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHH
T ss_pred CchhHHHHHHHHHHHHHccCHHH
Confidence 99999999999999998887543
No 155
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.06 E-value=1.1e-10 Score=102.91 Aligned_cols=91 Identities=16% Similarity=0.107 Sum_probs=84.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 143 EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV-----------------EWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 143 ~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~-----------------~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
.++.++.+..+|..+++.|+|++|+.+|+++++++|++. .+++++|.+|..+|+|++|+..|+
T Consensus 175 ~~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~ 254 (338)
T 2if4_A 175 RIGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCN 254 (338)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 345578899999999999999999999999999999987 489999999999999999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhchhhcc
Q 026642 206 DILKERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
++++++|++..+|+++|.+|...++..+
T Consensus 255 ~al~~~p~~~~a~~~lg~a~~~~g~~~~ 282 (338)
T 2if4_A 255 IVLTEEEKNPKALFRRGKAKAELGQMDS 282 (338)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHcCCHHH
Confidence 9999999999999999999998887543
No 156
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.06 E-value=1.2e-09 Score=103.15 Aligned_cols=100 Identities=8% Similarity=0.007 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG--RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG-KLSTAKRLFK 205 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g--~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g-~~~~A~~~l~ 205 (235)
++++++.++++++.+|++..+|...+.++.+.| ++++|++++++++++||.+..+|..++.++...| .+++++++++
T Consensus 89 ~~~eL~~~~~~l~~~pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~ 168 (567)
T 1dce_A 89 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 168 (567)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHH
Confidence 789999999999999999999999999999999 7799999999999999999999999999999999 9999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhc
Q 026642 206 DILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
++++.+|.|..+|+.++.++.+.
T Consensus 169 ~~I~~~p~n~saW~~r~~ll~~l 191 (567)
T 1dce_A 169 SLITRNFSNYSSWHYRSCLLPQL 191 (567)
T ss_dssp TTTTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCccHHHHHHHHHHhh
Confidence 99999999999999999998774
No 157
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=99.06 E-value=5.6e-10 Score=98.29 Aligned_cols=112 Identities=13% Similarity=0.066 Sum_probs=93.4
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCC-------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEP-------RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQ 187 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P-------~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~l 187 (235)
.-....+++++|+..++++++..+ ..+.++..+|.+|...|++++|++++++++++.+.. ..++.++
T Consensus 151 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 230 (383)
T 3ulq_A 151 ESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNI 230 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 334446678999999999998733 335689999999999999999999999999875533 2588899
Q ss_pred HHHHHHcCCHHHHHHHHHHHHH-----HC-CCCHHHHHHHHHHHhhchhhc
Q 026642 188 ALCYELMGKLSTAKRLFKDILK-----ER-PLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~-----~~-P~~~~a~~~l~~~~~~~~~~~ 232 (235)
|.+|..+|++++|++.|+++++ .+ |....++.++|.++.+.++..
T Consensus 231 g~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 281 (383)
T 3ulq_A 231 GLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKID 281 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHH
Confidence 9999999999999999999999 56 777999999999998887754
No 158
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=99.04 E-value=5.9e-10 Score=83.86 Aligned_cols=107 Identities=16% Similarity=0.011 Sum_probs=87.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNV------EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALCYEL 193 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~------~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~~~~ 193 (235)
.+++++|++.++++++..++.. .++..+|.++...|++++|++++++++++.+.. ..++..+|.++..
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 22 LGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 4568899999999888644322 488999999999999999999999999876543 5678899999999
Q ss_pred cCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchhhc
Q 026642 194 MGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 194 ~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~~~ 232 (235)
.|++++|++.++++++..+.. ..++..++.++...++..
T Consensus 102 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 146 (164)
T 3ro3_A 102 LQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 146 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHH
Confidence 999999999999999874322 677888999988877654
No 159
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=99.03 E-value=1.3e-09 Score=89.19 Aligned_cols=98 Identities=14% Similarity=0.039 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHH----cCCH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR----RGRNKEALEFVKRLIDIEP--NEVEWKLLQALCYEL----MGKL 197 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~----~g~~~eAi~~l~kai~l~P--~~~~a~~~lA~~~~~----~g~~ 197 (235)
++++|+++|+++++ +.+++++..||.+|.. .+++++|+++|+++++.++ +++.+++.+|.+|.. .+++
T Consensus 68 ~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~ 145 (212)
T 3rjv_A 68 DYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDD 145 (212)
T ss_dssp CHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCH
T ss_pred CHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCH
Confidence 68899999999965 4789999999999988 8899999999999999887 358999999999999 8899
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhhc
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
++|+.+|+++++. +++..+++++|.+|...
T Consensus 146 ~~A~~~~~~A~~~-~~~~~a~~~Lg~~y~~g 175 (212)
T 3rjv_A 146 VKASEYFKGSSSL-SRTGYAEYWAGMMFQQG 175 (212)
T ss_dssp HHHHHHHHHHHHT-SCTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHc-CCCHHHHHHHHHHHHcC
Confidence 9999999999988 77788999999998764
No 160
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=99.03 E-value=3.4e-09 Score=92.81 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=99.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC------HH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNK--EALEFVKRLIDIEPNEVEWKLLQALCYELMGK------LS 198 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~--eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~------~~ 198 (235)
..++++++.++++++.+|+|..+|...+.+....|+++ +++++++++++.||.|..+|..++.++...|+ ++
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ll~~l~~~~~~~~~~ 203 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFFLLFSKKHLATDNTID 203 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHSSGGGCCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccccchhhhHH
Confidence 56899999999999999999999999999999999999 99999999999999999999999999999998 99
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 199 TAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
++++.+++++..+|+|..+|+.++.++.+.+.
T Consensus 204 eEl~~~~~aI~~~p~n~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 204 EELNYVKDKIVKCPQNPSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCCCccHHHHHHHHHHhcCC
Confidence 99999999999999999999999999877665
No 161
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=99.02 E-value=9.8e-10 Score=86.99 Aligned_cols=112 Identities=15% Similarity=0.059 Sum_probs=90.5
Q ss_pred HHHHhcCCHHHHHHHHHHHHH------hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh---CCCC----HHHHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLE------KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI---EPNE----VEWKLLQ 187 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~------~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l---~P~~----~~a~~~l 187 (235)
......+++++|++.++++++ ..+....++..+|.++...|++++|++++++++++ .+++ ..++..+
T Consensus 34 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~l 113 (203)
T 3gw4_A 34 YVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEV 113 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHH
Confidence 333445678999999999998 45566788999999999999999999999999998 4433 4678889
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHCC--CC----HHHHHHHHHHHhhchhhc
Q 026642 188 ALCYELMGKLSTAKRLFKDILKERP--LL----LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~~~P--~~----~~a~~~l~~~~~~~~~~~ 232 (235)
|.++...|++++|+..++++++..+ ++ ..++.++|.++.+.++..
T Consensus 114 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 164 (203)
T 3gw4_A 114 ATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLL 164 (203)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHH
Confidence 9999999999999999999987533 22 455688999888877654
No 162
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=99.02 E-value=1e-08 Score=87.27 Aligned_cols=111 Identities=14% Similarity=0.043 Sum_probs=93.5
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCH------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNV------EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALC 190 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~------~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~ 190 (235)
....+++++|++.++++++..+... ..+..+|..+...|++++|+.+++++++..+.. ..++..+|.+
T Consensus 85 ~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~ 164 (293)
T 2qfc_A 85 LCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANI 164 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 3456779999999999999887655 346678888999999999999999999876543 5689999999
Q ss_pred HHHcCCHHHHHHHHHHHH---HHCCCC----HHHHHHHHHHHhhchhhcc
Q 026642 191 YELMGKLSTAKRLFKDIL---KERPLL----LRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 191 ~~~~g~~~~A~~~l~kaL---~~~P~~----~~a~~~l~~~~~~~~~~~~ 233 (235)
|..+|++++|+..|++++ +..|++ ..++.++|.+|.+.++.++
T Consensus 165 y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~ 214 (293)
T 2qfc_A 165 YAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEE 214 (293)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHH
Confidence 999999999999999999 667765 3689999999998877543
No 163
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=99.01 E-value=5.7e-09 Score=76.44 Aligned_cols=80 Identities=15% Similarity=0.044 Sum_probs=71.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIE-------PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~-------P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~ 218 (235)
+++-...+|..+++.|+|+.|+.+|+++++.. ...+..+..+|.+|+.+|++++|+..++++++++|++..++
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~ 83 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRAN 83 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHH
Confidence 46677899999999999999999999999863 34578899999999999999999999999999999999998
Q ss_pred HHHHHHH
Q 026642 219 HDLGRYV 225 (235)
Q Consensus 219 ~~l~~~~ 225 (235)
.++..+-
T Consensus 84 ~n~~~~~ 90 (104)
T 2v5f_A 84 GNLKYFE 90 (104)
T ss_dssp HHHHHHH
T ss_pred hhHHHHH
Confidence 8887443
No 164
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.00 E-value=9.3e-11 Score=108.20 Aligned_cols=88 Identities=11% Similarity=0.096 Sum_probs=82.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYV 225 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~ 225 (235)
.++++..+|..+.+.|++++|+++|+++++++|+++.++..+|.+|..+|++++|++.|+++++++|++..+++++|.+|
T Consensus 5 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~ 84 (477)
T 1wao_1 5 RAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASN 84 (477)
T ss_dssp HHTTSSSSSSSTTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 45667788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhhcc
Q 026642 226 SMTLQIQS 233 (235)
Q Consensus 226 ~~~~~~~~ 233 (235)
.+.++.++
T Consensus 85 ~~~g~~~e 92 (477)
T 1wao_1 85 MALGKFRA 92 (477)
T ss_dssp HHHTCHHH
T ss_pred HHcCCHHH
Confidence 98877543
No 165
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=99.00 E-value=2.7e-09 Score=98.30 Aligned_cols=101 Identities=13% Similarity=0.039 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHh-hCCCCHHHHHHHHHHHHHc
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMR-------RGRNK-------EALEFVKRLID-IEPNEVEWKLLQALCYELM 194 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~-------~g~~~-------eAi~~l~kai~-l~P~~~~a~~~lA~~~~~~ 194 (235)
.+++..|+++++.+|+++++|..+|..+.. .|+++ +|+..|+++++ ++|++...|..+|.++...
T Consensus 255 ~~a~~~y~~al~~~p~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~ 334 (530)
T 2ooe_A 255 KRVMFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESR 334 (530)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhc
Confidence 477889999999999999999999999987 79987 99999999997 8999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHhhchh
Q 026642 195 GKLSTAKRLFKDILKERPLLL-RALHDLGRYVSMTLQ 230 (235)
Q Consensus 195 g~~~~A~~~l~kaL~~~P~~~-~a~~~l~~~~~~~~~ 230 (235)
|++++|.+.|+++++.+|++. .+|.+++.++.+.++
T Consensus 335 g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~ 371 (530)
T 2ooe_A 335 MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG 371 (530)
T ss_dssp TCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcC
Confidence 999999999999999999985 689888888766554
No 166
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.99 E-value=6.7e-09 Score=92.59 Aligned_cols=102 Identities=9% Similarity=0.001 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHc-C-CHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG-RNKEALEFVKRLIDIEPNEVEWKLLQALCYELM-G-KLSTAKRLFK 205 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g-~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~-g-~~~~A~~~l~ 205 (235)
.++|++.++++|+.+|++..+|...+.++...| .++++++++++++..+|++..+|..++.++... + +++++++.++
T Consensus 70 se~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~ 149 (349)
T 3q7a_A 70 SERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIH 149 (349)
T ss_dssp SHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHH
Confidence 478999999999999999999999999999999 599999999999999999999999999999998 8 9999999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 206 DILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
++++.+|+|..+|..++.++.+.+.
T Consensus 150 k~L~~dpkNy~AW~~R~wvl~~l~~ 174 (349)
T 3q7a_A 150 GSLLPDPKNYHTWAYLHWLYSHFST 174 (349)
T ss_dssp HHTSSCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCHHHHHHHHHHHHHhcc
Confidence 9999999999999998888776554
No 167
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.99 E-value=1.6e-09 Score=85.78 Aligned_cols=107 Identities=13% Similarity=-0.024 Sum_probs=87.5
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh------hCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID------IEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~------l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.+++++|++.++.+....+....++..+|.++...|++++|+.+++++++ ..+....++..+|.+|...|++++
T Consensus 5 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 84 (203)
T 3gw4_A 5 AHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDA 84 (203)
T ss_dssp --CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHH
Confidence 45688888865555443337789999999999999999999999999999 445567889999999999999999
Q ss_pred HHHHHHHHHHH---CCCC----HHHHHHHHHHHhhchhhc
Q 026642 200 AKRLFKDILKE---RPLL----LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 200 A~~~l~kaL~~---~P~~----~~a~~~l~~~~~~~~~~~ 232 (235)
|++.++++++. .+++ ..++.++|.++...++.+
T Consensus 85 A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~ 124 (203)
T 3gw4_A 85 ARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLA 124 (203)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHH
Confidence 99999999998 4432 677899999988877644
No 168
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.99 E-value=1.2e-09 Score=80.06 Aligned_cols=69 Identities=12% Similarity=0.088 Sum_probs=65.3
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 164 ~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++|++.|+++++.+|+++.+++.+|.+|...|++++|++.|+++++.+|++..+++++|.++.+.++..
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~ 70 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRA 70 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHH
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHH
Confidence 468999999999999999999999999999999999999999999999999999999999998887754
No 169
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.98 E-value=5.7e-10 Score=98.23 Aligned_cols=108 Identities=12% Similarity=0.069 Sum_probs=92.8
Q ss_pred hcCCHHHHHHHHHHHHHh------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-------CHHHHHHHHHHH
Q 026642 125 ALMGKSEVEEMFEKLLEK------EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-------EVEWKLLQALCY 191 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~------~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~-------~~~a~~~lA~~~ 191 (235)
..+++++|++.|+++++. ++..++++..+|.+|...|++++|+.++++++++.+. ...++..+|.+|
T Consensus 115 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~ 194 (383)
T 3ulq_A 115 DQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEAYNIRLLQCHSLFATNF 194 (383)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCSTTHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHHH
Confidence 456789999999999986 2335689999999999999999999999999998443 346888999999
Q ss_pred HHcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchhhc
Q 026642 192 ELMGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 192 ~~~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~~~ 232 (235)
..+|++++|++.|+++++..+.. ..++.++|.+|...++..
T Consensus 195 ~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~ 241 (383)
T 3ulq_A 195 LDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYE 241 (383)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHH
Confidence 99999999999999999876543 468999999999888754
No 170
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.98 E-value=1.2e-09 Score=94.12 Aligned_cols=84 Identities=13% Similarity=-0.075 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHHhCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHcC
Q 026642 128 GKSEVEEMFEKLLEKEP--RN----VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALCYELMG 195 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P--~~----~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~~~~~g 195 (235)
++++|++.|+++++..+ .+ +.++..+|.+|.. |++++|+++|++++++.+.. ..++..+|.+|..+|
T Consensus 91 ~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g 169 (307)
T 2ifu_A 91 RMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQ 169 (307)
T ss_dssp CGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcC
Confidence 34455555555544421 11 2344445555544 55555555555555444322 234444555555555
Q ss_pred CHHHHHHHHHHHHHHCC
Q 026642 196 KLSTAKRLFKDILKERP 212 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P 212 (235)
+|++|+..|+++++..|
T Consensus 170 ~~~~A~~~~~~al~~~~ 186 (307)
T 2ifu_A 170 KFDEAAASLQKEKSMYK 186 (307)
T ss_dssp CHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 55555555555554433
No 171
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.98 E-value=7e-10 Score=88.32 Aligned_cols=72 Identities=11% Similarity=-0.037 Sum_probs=66.8
Q ss_pred HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 158 MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL----------STAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 158 ~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~----------~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
.+.+.|++|++.++++++++|+++++|+++|.++...|++ ++|+..|+++|+++|++..+|+++|.+|..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~ 92 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDEAVWCIGNAYTS 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHH
Confidence 3567799999999999999999999999999999999875 599999999999999999999999999987
Q ss_pred ch
Q 026642 228 TL 229 (235)
Q Consensus 228 ~~ 229 (235)
.+
T Consensus 93 lg 94 (158)
T 1zu2_A 93 FA 94 (158)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 172
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.96 E-value=1.8e-08 Score=89.27 Aligned_cols=100 Identities=8% Similarity=0.003 Sum_probs=95.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC-HHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGR--NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK-LSTAKRLFK 205 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~--~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~-~~~A~~~l~ 205 (235)
+++++..++.++..+|++..+|...+.++...|+ +++++++++++++.+|.|..+|..++.++...|+ ++++++.++
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~ 169 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTD 169 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHH
Confidence 5789999999999999999999999999999994 9999999999999999999999999999999999 699999999
Q ss_pred HHHHHCCCCHHHHHHHHHHHhhc
Q 026642 206 DILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
++++.+|.|..+|..++.++.+.
T Consensus 170 ~~I~~~p~N~SAW~~R~~ll~~l 192 (331)
T 3dss_A 170 SLITRNFSNYSSWHYRSCLLPQL 192 (331)
T ss_dssp HHHHHCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999887765
No 173
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.96 E-value=1.4e-09 Score=94.46 Aligned_cols=107 Identities=16% Similarity=0.028 Sum_probs=79.8
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVE------ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALCYEL 193 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~------a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~~~~ 193 (235)
.+++++|++.++++++..++..+ ++..+|.+|...|++++|+.++++++++.+.. ..++..+|.+|..
T Consensus 200 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~ 279 (406)
T 3sf4_A 200 LGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 279 (406)
T ss_dssp HTBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHH
Confidence 45677888888888876544333 77888888888888888888888888776654 6677788888888
Q ss_pred cCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchhhc
Q 026642 194 MGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 194 ~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~~~ 232 (235)
.|++++|++.|+++++..+.. ..++..+|.+|.+.++..
T Consensus 280 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 324 (406)
T 3sf4_A 280 LQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHD 324 (406)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred hCcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHH
Confidence 888888888888888775543 667778888777766543
No 174
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.95 E-value=7.2e-09 Score=95.47 Aligned_cols=113 Identities=17% Similarity=0.072 Sum_probs=94.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-HHHcCC
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNV-EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALC-YELMGK 196 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~-~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~-~~~~g~ 196 (235)
+..-....+++++|++.|+++++.+|+++ .+|..++..+.+.|++++|.+.|+++++..|.....+...|.+ +...|+
T Consensus 327 ~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~ 406 (530)
T 2ooe_A 327 YADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKD 406 (530)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCC
Confidence 33444445678999999999999999986 6999999999999999999999999999888877777766655 446899
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 197 LSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
+++|.+.|+++++.+|++..+|..++.++.+.++.
T Consensus 407 ~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~ 441 (530)
T 2ooe_A 407 KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNED 441 (530)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCH
T ss_pred hhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999888776654
No 175
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.95 E-value=2.1e-09 Score=87.94 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=89.1
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC----CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCC
Q 026642 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG----RNKEALEFVKRLIDIEPNEVEWKLLQALCYEL----MGK 196 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g----~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~----~g~ 196 (235)
..+++++|+++|+++++. ++++++..||.+|.. + ++++|+++|+++++ ++++.+++.+|.+|.. .++
T Consensus 30 ~~~~~~~A~~~~~~a~~~--g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~--~g~~~a~~~Lg~~y~~g~g~~~d 104 (212)
T 3rjv_A 30 SSGDYQKAEYWAQKAAAQ--GDGDALALLAQLKIR-NPQQADYPQARQLAEKAVE--AGSKSGEIVLARVLVNRQAGATD 104 (212)
T ss_dssp HHTCHHHHHHHHHHHHHT--TCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHH--TTCHHHHHHHHHHHTCGGGSSCC
T ss_pred cCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHH--CCCHHHHHHHHHHHHcCCCCccC
Confidence 356799999999999886 689999999999998 7 99999999999965 5799999999999998 899
Q ss_pred HHHHHHHHHHHHHHCC--CCHHHHHHHHHHHhh
Q 026642 197 LSTAKRLFKDILKERP--LLLRALHDLGRYVSM 227 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P--~~~~a~~~l~~~~~~ 227 (235)
+++|+++|+++++..+ +++.+++++|.+|..
T Consensus 105 ~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~ 137 (212)
T 3rjv_A 105 VAHAITLLQDAARDSESDAAVDAQMLLGLIYAS 137 (212)
T ss_dssp HHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHc
Confidence 9999999999999988 459999999999987
No 176
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.94 E-value=3.5e-09 Score=90.23 Aligned_cols=113 Identities=15% Similarity=0.047 Sum_probs=91.7
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKEPRNVE------ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQA 188 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~P~~~~------a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA 188 (235)
+.....+++++|+..++++++..+.+.+ .+..+|..+...|++++|+.++++++++.+.. ..++..+|
T Consensus 83 ~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg 162 (293)
T 3u3w_A 83 IMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIA 162 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Confidence 3445567899999999999998877766 33458888998999999999999999965442 34688999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHH---CCCC----HHHHHHHHHHHhhchhhcc
Q 026642 189 LCYELMGKLSTAKRLFKDILKE---RPLL----LRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 189 ~~~~~~g~~~~A~~~l~kaL~~---~P~~----~~a~~~l~~~~~~~~~~~~ 233 (235)
.+|..+|++++|+..|+++++. .+.+ ..+++++|.+|.+.++..+
T Consensus 163 ~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~ 214 (293)
T 3u3w_A 163 NIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEE 214 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999952 1122 6789999999998887543
No 177
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.93 E-value=2e-08 Score=88.91 Aligned_cols=102 Identities=10% Similarity=0.042 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC--
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGR----------NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK-- 196 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~----------~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~-- 196 (235)
.++|++.++++|..+|++..+|...+.+....|+ +++++.++++++..+|.+..+|..++.++...|+
T Consensus 46 s~eaL~~t~~~L~~nP~~ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~ 125 (331)
T 3dss_A 46 DESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPN 125 (331)
T ss_dssp SHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCC
T ss_pred CHHHHHHHHHHHHHCchhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCccc
Confidence 3689999999999999999999999999988776 7899999999999999999999999999999994
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 197 LSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
++++++.++++++.+|.|..+|...+.++...+.
T Consensus 126 ~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~ 159 (331)
T 3dss_A 126 WARELELCARFLEADERNFHCWDYRRFVAAQAAV 159 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCc
Confidence 9999999999999999999999999988877654
No 178
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.91 E-value=1.9e-09 Score=94.76 Aligned_cols=111 Identities=18% Similarity=0.063 Sum_probs=91.6
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHH------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNVE------ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALC 190 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~~------a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~ 190 (235)
....+++++|++.|+++++..+...+ ++..+|.+|...|++++|++++++++++.+.. ..++..+|.+
T Consensus 233 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~ 312 (411)
T 4a1s_A 233 YYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNT 312 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34456789999999999987664433 88999999999999999999999999987754 6788899999
Q ss_pred HHHcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchhhcc
Q 026642 191 YELMGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 191 ~~~~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~~~~ 233 (235)
|..+|++++|++.|+++++..++. ..++..++.+|.+.++.++
T Consensus 313 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 361 (411)
T 4a1s_A 313 YTLLHEFNTAIEYHNRHLAIAQELGDRIGEARACWSLGNAHSAIGGHER 361 (411)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHhccHHH
Confidence 999999999999999999875443 5688899999888877543
No 179
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.90 E-value=1.7e-09 Score=93.78 Aligned_cols=111 Identities=8% Similarity=-0.083 Sum_probs=55.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC--HHHHHHHHHHHHHcCC
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE--VEWKLLQALCYELMGK 196 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~--~~a~~~lA~~~~~~g~ 196 (235)
+.......+++++|.+.|+.++..+|++. +++.+|.++++.|+|++|+.++++++...++. ..+++.+|.++..+|+
T Consensus 108 yA~~L~~~g~y~eA~~~l~~~~~~~p~~~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~ 186 (282)
T 4f3v_A 108 FAACEAAQGNYADAMEALEAAPVAGSEHL-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLAL 186 (282)
T ss_dssp HHHHHHHHTCHHHHHHHHTSSCCTTCHHH-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCchH-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCC
Confidence 33444445556666666666665556554 55555555555555555555555444432111 2345555555555555
Q ss_pred HHHHHHHHHHHHHHC--CC-CHHHHHHHHHHHhhchh
Q 026642 197 LSTAKRLFKDILKER--PL-LLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~--P~-~~~a~~~l~~~~~~~~~ 230 (235)
+++|++.|++++... |. ...+++.+|+++.+.++
T Consensus 187 ~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr 223 (282)
T 4f3v_A 187 FTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN 223 (282)
T ss_dssp HHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC
Confidence 555555555554322 33 23455555555544444
No 180
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.89 E-value=4.1e-09 Score=92.76 Aligned_cols=112 Identities=16% Similarity=0.073 Sum_probs=92.7
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPR-------NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN------EVEWKLLQA 188 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~-------~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~------~~~a~~~lA 188 (235)
-....+++++|+..++++++..+. .+.++..+|.+|...|++++|++++++++++.+. ...++.++|
T Consensus 150 ~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg 229 (378)
T 3q15_A 150 AYYHMKQTHVSMYHILQALDIYQNHPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIA 229 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 334456789999999999986332 3567889999999999999999999999986431 246788899
Q ss_pred HHHHHcCCHHHHHHHHHHHHH-----HCCCCHHHHHHHHHHHhhchhhcc
Q 026642 189 LCYELMGKLSTAKRLFKDILK-----ERPLLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 189 ~~~~~~g~~~~A~~~l~kaL~-----~~P~~~~a~~~l~~~~~~~~~~~~ 233 (235)
.+|..+|++++|++.|+++++ .+|....++.++|.++.+.++.++
T Consensus 230 ~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~ 279 (378)
T 3q15_A 230 NSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQK 279 (378)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHH
Confidence 999999999999999999999 888889999999999998887543
No 181
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.89 E-value=8.1e-09 Score=88.89 Aligned_cols=98 Identities=13% Similarity=0.083 Sum_probs=83.1
Q ss_pred CCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHHHc
Q 026642 127 MGKSEVEEMFEKLLEKEPRN------VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALCYELM 194 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~------~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~~~~~ 194 (235)
+++++|++.|+++++..+.. ..++..+|.+|...|++++|+++|++++++.+++ ..++..+|.++..+
T Consensus 129 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~ 208 (307)
T 2ifu_A 129 LDLSKAVHLYQQAAAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHR 208 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHc
Confidence 67899999999999986654 6789999999999999999999999999987654 34788899999999
Q ss_pred CCHHHHHHHHHHHHHHCCCCH-----HHHHHHHHHH
Q 026642 195 GKLSTAKRLFKDILKERPLLL-----RALHDLGRYV 225 (235)
Q Consensus 195 g~~~~A~~~l~kaL~~~P~~~-----~a~~~l~~~~ 225 (235)
|++++|+..|++++ .+|++. ..+..++..+
T Consensus 209 g~~~~A~~~~~~al-~~p~~~~~~e~~~l~~l~~~~ 243 (307)
T 2ifu_A 209 ADYVAAQKCVRESY-SIPGFSGSEDCAALEDLLQAY 243 (307)
T ss_dssp TCHHHHHHHHHHHT-TSTTSTTSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHHHHH
Confidence 99999999999999 999763 3344555444
No 182
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.88 E-value=2.7e-09 Score=89.44 Aligned_cols=108 Identities=16% Similarity=0.021 Sum_probs=88.0
Q ss_pred hcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHHHHHHHH
Q 026642 125 ALMGKSEVEEMFEKLLEKEPRN------VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLLQALCYE 192 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~~------~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~lA~~~~ 192 (235)
..+++++|++.++++++..+.. ..++..+|.++...|++++|++++++++++.+.. ..++..+|.+|.
T Consensus 195 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~ 274 (338)
T 3ro2_A 195 LLGNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYT 274 (338)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHH
Confidence 3456889999999988764432 2388999999999999999999999999887655 678888999999
Q ss_pred HcCCHHHHHHHHHHHHHHCCCC------HHHHHHHHHHHhhchhhc
Q 026642 193 LMGKLSTAKRLFKDILKERPLL------LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 193 ~~g~~~~A~~~l~kaL~~~P~~------~~a~~~l~~~~~~~~~~~ 232 (235)
..|++++|...++++++..+.. ..++..++.+|.+.++.+
T Consensus 275 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 320 (338)
T 3ro2_A 275 LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHD 320 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHH
T ss_pred HhcCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChH
Confidence 9999999999999998876543 567888888888877654
No 183
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.88 E-value=1.2e-08 Score=90.97 Aligned_cols=103 Identities=7% Similarity=-0.036 Sum_probs=98.2
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-C-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH-------
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRR-G-RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS------- 198 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~-g-~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~------- 198 (235)
.++++++.++++|..+|++..+|...+.++... + ++++++++++++++.+|.+..+|..++.++...|+++
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~ 183 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQW 183 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccccchhhH
Confidence 489999999999999999999999999999998 8 9999999999999999999999999999999999988
Q ss_pred -HHHHHHHHHHHHCCCCHHHHHHHHHHHhhchh
Q 026642 199 -TAKRLFKDILKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 199 -~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
++++.++++++.+|.|..+|..++.++.+.+.
T Consensus 184 ~eELe~~~k~I~~dp~N~SAW~~R~~lL~~l~~ 216 (349)
T 3q7a_A 184 GSELDWCNEMLRVDGRNNSAWGWRWYLRVSRPG 216 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999887654
No 184
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.85 E-value=4.7e-08 Score=89.12 Aligned_cols=96 Identities=10% Similarity=-0.008 Sum_probs=79.3
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR----RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL----MGKL 197 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~----~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~----~g~~ 197 (235)
..++++|+.+|+++++. ++++++..||.+|.. .+++++|+++|+++++. +++.+++.+|.+|.. .+++
T Consensus 56 ~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~ 131 (490)
T 2xm6_A 56 TKDLTQAMDWFRRAAEQ--GYTPAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALK--GLPQAQQNLGVMYHEGNGVKVDK 131 (490)
T ss_dssp CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCH
T ss_pred CcCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCH
Confidence 56778888888888876 678888888888888 88888888888888775 478888888888888 7888
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 198 STAKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 198 ~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
++|++.|+++.+. ++..+++++|.+|..
T Consensus 132 ~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~ 159 (490)
T 2xm6_A 132 AESVKWFRLAAEQ--GRDSGQQSMGDAYFE 159 (490)
T ss_dssp HHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 8888888888765 478888888888765
No 185
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.84 E-value=3.2e-08 Score=75.87 Aligned_cols=91 Identities=10% Similarity=0.006 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL----MGKLSTAKRLF 204 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~----~g~~~~A~~~l 204 (235)
+++|+++|+++.+.+ ++++. +|.+|...+..++|+++|+++.+. +++.+++.+|.+|.. .+++++|+++|
T Consensus 11 ~~~A~~~~~~aa~~g--~~~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~ 84 (138)
T 1klx_A 11 LKKAIQYYVKACELN--EMFGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYY 84 (138)
T ss_dssp HHHHHHHHHHHHHTT--CTTHH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC--CHhhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHH
Confidence 455556666655554 23333 555555555555566666666554 455566666666555 55566666666
Q ss_pred HHHHHHCCCCHHHHHHHHHHHhh
Q 026642 205 KDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 205 ~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
+++.+. ++..++++++.+|..
T Consensus 85 ~~Aa~~--g~~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 85 SKACGL--NDQDGCLILGYKQYA 105 (138)
T ss_dssp HHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHcC--CCHHHHHHHHHHHHC
Confidence 665554 455555666655554
No 186
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.82 E-value=2.1e-08 Score=88.20 Aligned_cols=111 Identities=13% Similarity=0.028 Sum_probs=89.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCC------CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCHHHHHHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEP------RNVEALKVVMQGNMRRGRNKEALEFVKRLID-----IEPNEVEWKLLQ 187 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P------~~~~a~~~la~~~~~~g~~~eAi~~l~kai~-----l~P~~~~a~~~l 187 (235)
+..-....+++++|++.|+++++..+ ....++..+|.+|...|++++|+++++++++ .+|....++..+
T Consensus 188 lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l 267 (378)
T 3q15_A 188 IAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGL 267 (378)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHH
Confidence 33344456778999999999998522 2346889999999999999999999999999 788889999999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCC-----CHHHHHHHHHHHhhch
Q 026642 188 ALCYELMGKLSTAKRLFKDILKERPL-----LLRALHDLGRYVSMTL 229 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~~~P~-----~~~a~~~l~~~~~~~~ 229 (235)
|.+|..+|++++|+..++++++..+. ....+..++.++...+
T Consensus 268 a~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~ 314 (378)
T 3q15_A 268 SWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETV 314 (378)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSC
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999998543 3444555555555444
No 187
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.81 E-value=1e-07 Score=72.96 Aligned_cols=90 Identities=11% Similarity=0.055 Sum_probs=80.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMR----RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL----MGKLS 198 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~----~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~----~g~~~ 198 (235)
...++|+++|+++.+. .+++++..||.+|.. .+++++|+++|+++.+. .++.+.+.+|.+|.. .++++
T Consensus 39 ~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g~~~a~~~Lg~~y~~G~g~~~d~~ 114 (138)
T 1klx_A 39 INKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQYAGKGVVKNEK 114 (138)
T ss_dssp SCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHcC--CCHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--CCHHHHHHHHHHHHCCCCCCcCHH
Confidence 3457799999999987 789999999999999 89999999999999987 689999999999999 99999
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHH
Q 026642 199 TAKRLFKDILKERPLLLRALHDLG 222 (235)
Q Consensus 199 ~A~~~l~kaL~~~P~~~~a~~~l~ 222 (235)
+|+++|+++.+.. +..+..+++
T Consensus 115 ~A~~~~~~Aa~~g--~~~A~~~l~ 136 (138)
T 1klx_A 115 QAVKTFEKACRLG--SEDACGILN 136 (138)
T ss_dssp HHHHHHHHHHHTT--CHHHHHHC-
T ss_pred HHHHHHHHHHHCC--CHHHHHHHh
Confidence 9999999999874 666666654
No 188
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=98.77 E-value=8.9e-08 Score=85.80 Aligned_cols=87 Identities=17% Similarity=0.205 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHH--------------------------------------------HHcCCHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGN--------------------------------------------MRRGRNK 164 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~--------------------------------------------~~~g~~~ 164 (235)
..+|+.+|+++++.+|+++.+|..++.+| +..|+++
T Consensus 215 ~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d 294 (372)
T 3ly7_A 215 LNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTD 294 (372)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCCcCHHHHHHHHHHHHhCCCHH
Confidence 48899999999999999999988655544 2368888
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHH
Q 026642 165 EALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLR 216 (235)
Q Consensus 165 eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~ 216 (235)
+|+..++++++++|+ ..+|..+|.++...|++++|++.|++++.++|....
T Consensus 295 ~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~t 345 (372)
T 3ly7_A 295 ESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANT 345 (372)
T ss_dssp HHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHHH
T ss_pred HHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcCh
Confidence 888888888888864 667788888888888888888888888888887743
No 189
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.77 E-value=3.4e-08 Score=85.55 Aligned_cols=100 Identities=13% Similarity=-0.070 Sum_probs=84.8
Q ss_pred HHHhcCCHHHHHHHHHHHHHhC-CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHHHHcCC
Q 026642 122 KRDALMGKSEVEEMFEKLLEKE-PR-NVEALKVVMQGNMRRGRNKEALEFVKRLIDIE--PN-EVEWKLLQALCYELMGK 196 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~-P~-~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~--P~-~~~a~~~lA~~~~~~g~ 196 (235)
.....+++++|+..|+++.+.. |. ..++++.+|.++...|++++|+.+|++++.-. |. .+++++.+|.++..+|+
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr 223 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN 223 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC
Confidence 4445677999999999876643 22 14689999999999999999999999999654 55 56899999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHH
Q 026642 197 LSTAKRLFKDILKERPLLLRALHDLG 222 (235)
Q Consensus 197 ~~~A~~~l~kaL~~~P~~~~a~~~l~ 222 (235)
.++|...|++++..+|+ ..+...|.
T Consensus 224 ~deA~~~l~~a~a~~P~-~~~~~aL~ 248 (282)
T 4f3v_A 224 ESAAVALLEWLQTTHPE-PKVAAALK 248 (282)
T ss_dssp HHHHHHHHHHHHHHSCC-HHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCc-HHHHHHHh
Confidence 99999999999999999 77776654
No 190
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.75 E-value=5.2e-08 Score=90.53 Aligned_cols=104 Identities=13% Similarity=0.028 Sum_probs=83.6
Q ss_pred HHhcCCHHHHHHHHHHHHHh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEK-----EPR---NVEALKVVMQGNMRRGRNKEALEFVKRLIDI-----EPNEV---EWKLL 186 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~-----~P~---~~~a~~~la~~~~~~g~~~eAi~~l~kai~l-----~P~~~---~a~~~ 186 (235)
....+++++|+..++++|+. .++ -+..+..||.+|..+|+|++|+.+++++++. .|+++ ..+++
T Consensus 319 ~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~n 398 (490)
T 3n71_A 319 ARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMR 398 (490)
T ss_dssp HHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 44567899999999999985 344 4567899999999999999999999999975 45554 56889
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHHh
Q 026642 187 QALCYELMGKLSTAKRLFKDILK-----ERPLLL---RALHDLGRYVS 226 (235)
Q Consensus 187 lA~~~~~~g~~~~A~~~l~kaL~-----~~P~~~---~a~~~l~~~~~ 226 (235)
+|.+|..+|+|++|+..|+++++ +-|+++ .....++.++.
T Consensus 399 La~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~ 446 (490)
T 3n71_A 399 AGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEM 446 (490)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHH
Confidence 99999999999999999999987 457773 33445554443
No 191
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.74 E-value=5.4e-08 Score=70.00 Aligned_cols=76 Identities=16% Similarity=0.081 Sum_probs=61.3
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN--EVEWKLLQALCYELM 194 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~--~~~a~~~lA~~~~~~ 194 (235)
+.......+++++|++.|+++++.+|+++.+|..+|.+|...|++++|+++|++++++.|+ +......+..++...
T Consensus 13 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~~~l~~~ 90 (100)
T 3ma5_A 13 LAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQDAKLKA 90 (100)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHHHHHHHc
Confidence 3344445677999999999999999999999999999999999999999999999998764 344444445444443
No 192
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.73 E-value=7.8e-08 Score=71.98 Aligned_cols=92 Identities=12% Similarity=0.024 Sum_probs=76.9
Q ss_pred HHHhcCCHHHHHHHHHHHHHhCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------CHHHHHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEKEPRN------VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN------EVEWKLLQAL 189 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~~P~~------~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~------~~~a~~~lA~ 189 (235)
.....+++++|++.++++++..+.. ..++..+|.++...|++++|++++++++++.+. ...++..+|.
T Consensus 58 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~ 137 (164)
T 3ro3_A 58 AYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGN 137 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHH
Confidence 3344667899999999999875432 678999999999999999999999999987432 2567888999
Q ss_pred HHHHcCCHHHHHHHHHHHHHHCCC
Q 026642 190 CYELMGKLSTAKRLFKDILKERPL 213 (235)
Q Consensus 190 ~~~~~g~~~~A~~~l~kaL~~~P~ 213 (235)
+|...|++++|.+.++++++....
T Consensus 138 ~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 138 AYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHHccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987543
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.71 E-value=7.5e-08 Score=83.83 Aligned_cols=110 Identities=10% Similarity=-0.031 Sum_probs=86.8
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCC--H----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCHHHHHHHH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRN--V----EALKVVMQGNMRRGRNKEALEFVKRLIDIE--------PNEVEWKLLQA 188 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~--~----~a~~~la~~~~~~g~~~eAi~~l~kai~l~--------P~~~~a~~~lA 188 (235)
....+++++|++.++++++..+.. . .++..+|.++...|++++|++++++++++. |....++..+|
T Consensus 63 ~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la 142 (373)
T 1hz4_A 63 LHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRA 142 (373)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHH
Confidence 344567899999999988864432 2 346788999999999999999999999875 33456777899
Q ss_pred HHHHHcCCHHHHHHHHHHHHHHCCCC-----HHHHHHHHHHHhhchhhc
Q 026642 189 LCYELMGKLSTAKRLFKDILKERPLL-----LRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 189 ~~~~~~g~~~~A~~~l~kaL~~~P~~-----~~a~~~l~~~~~~~~~~~ 232 (235)
.+|...|++++|...+++++...+.. ..++..++.++...++..
T Consensus 143 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 191 (373)
T 1hz4_A 143 QLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLD 191 (373)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHH
Confidence 99999999999999999999988753 567788888887776643
No 194
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.70 E-value=4.3e-08 Score=89.71 Aligned_cols=92 Identities=17% Similarity=0.088 Sum_probs=76.9
Q ss_pred cCCHHHHHHHHHHHHHh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEK-----EPRNV---EALKVVMQGNMRRGRNKEALEFVKRLIDI-----EPNEV---EWKLLQAL 189 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~-----~P~~~---~a~~~la~~~~~~g~~~eAi~~l~kai~l-----~P~~~---~a~~~lA~ 189 (235)
.+++++|+..++++|+. .|+++ ..+..||.+|..+|+|++|+.+++++++. .|+++ ..++++|.
T Consensus 311 ~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 390 (433)
T 3qww_A 311 YKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGR 390 (433)
T ss_dssp TSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 45689999999999985 45554 56889999999999999999999999974 45554 56889999
Q ss_pred HHHHcCCHHHHHHHHHHHHHH-----CCCCHHH
Q 026642 190 CYELMGKLSTAKRLFKDILKE-----RPLLLRA 217 (235)
Q Consensus 190 ~~~~~g~~~~A~~~l~kaL~~-----~P~~~~a 217 (235)
+|..+|+|++|+..|+++++. -|+++.+
T Consensus 391 ~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~ 423 (433)
T 3qww_A 391 LYMGLENKAAGEKALKKAIAIMEVAHGKDHPYI 423 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHH
T ss_pred HHHhccCHHHHHHHHHHHHHHHHHHcCCCChHH
Confidence 999999999999999999884 4666433
No 195
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.69 E-value=5.7e-08 Score=84.33 Aligned_cols=84 Identities=12% Similarity=0.065 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHHH-cCCHHHH
Q 026642 130 SEVEEMFEKLLEKEPR--NVEALKVVMQGNMRR-----GRNKEALEFVKRLIDIEPNE-VEWKLLQALCYEL-MGKLSTA 200 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~--~~~a~~~la~~~~~~-----g~~~eAi~~l~kai~l~P~~-~~a~~~lA~~~~~-~g~~~~A 200 (235)
.+|...+++++++||+ +..+|..+|.+|... |+.++|.++|+++++++|+. ...++.+|..+.. +|++++|
T Consensus 180 ~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a 259 (301)
T 3u64_A 180 HAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGF 259 (301)
T ss_dssp HHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHH
Confidence 6788999999999999 777999999999995 99999999999999999985 9999999999988 5999999
Q ss_pred HHHHHHHHHHCCC
Q 026642 201 KRLFKDILKERPL 213 (235)
Q Consensus 201 ~~~l~kaL~~~P~ 213 (235)
.+++++++..+|.
T Consensus 260 ~~~L~kAL~a~p~ 272 (301)
T 3u64_A 260 DEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHHHCCGG
T ss_pred HHHHHHHHcCCCC
Confidence 9999999998887
No 196
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.69 E-value=2.4e-07 Score=84.46 Aligned_cols=95 Identities=15% Similarity=0.105 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH----cCCHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG---RNKEALEFVKRLIDIEPNEVEWKLLQALCYEL----MGKLST 199 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g---~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~----~g~~~~ 199 (235)
.++++|+.+|+++++. .+++++..+|.+|...| ++++|+++|+++++. +++.+++.+|.+|.. .+++++
T Consensus 310 ~~~~~A~~~~~~a~~~--~~~~a~~~lg~~y~~~g~~~~~~~A~~~~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~ 385 (490)
T 2xm6_A 310 KNREQAISWYTKSAEQ--GDATAQANLGAIYFRLGSEEEHKKAVEWFRKAAAK--GEKAAQFNLGNALLQGKGVKKDEQQ 385 (490)
T ss_dssp CCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHH
T ss_pred CCHHHHHHHHHHHHhc--CCHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHH
Confidence 4567777777777665 45677777777777755 677777777777766 467777777777777 777777
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 200 AKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
|+++|+++++.. +..+++++|.+|.+
T Consensus 386 A~~~~~~A~~~~--~~~a~~~Lg~~y~~ 411 (490)
T 2xm6_A 386 AAIWMRKAAEQG--LSAAQVQLGEIYYY 411 (490)
T ss_dssp HHHHHHHHHHTT--CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--CHHHHHHHHHHHHc
Confidence 777777777653 57777777777765
No 197
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.69 E-value=5.4e-08 Score=84.77 Aligned_cols=107 Identities=14% Similarity=0.021 Sum_probs=88.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCCH-----HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHHHHHHHHHHc
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNV-----EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV------EWKLLQALCYELM 194 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~-----~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~------~a~~~lA~~~~~~ 194 (235)
.+++++|+..++++++..|.+. .++..+|.++...|++++|++.+++++++.+... .++..+|.++...
T Consensus 27 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 106 (373)
T 1hz4_A 27 DGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQ 106 (373)
T ss_dssp TTCHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCCCchhHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHC
Confidence 4458899999999999877553 2678899999999999999999999999765432 3467899999999
Q ss_pred CCHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHhhchhhc
Q 026642 195 GKLSTAKRLFKDILKER--------PLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 195 g~~~~A~~~l~kaL~~~--------P~~~~a~~~l~~~~~~~~~~~ 232 (235)
|++++|++.++++++.. |....++.+++.++...++..
T Consensus 107 G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~ 152 (373)
T 1hz4_A 107 GFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLD 152 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHH
Confidence 99999999999999875 334677888999888777643
No 198
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.64 E-value=1.3e-07 Score=86.25 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHH-H--HHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcC-----CHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQG-N--MRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMG-----KLST 199 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~-~--~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g-----~~~~ 199 (235)
++++|+++|++++ |++++++..+|.+ + ...|++++|+++|+++++. +++.+++.+|.+|. .| ++++
T Consensus 232 d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~ 305 (452)
T 3e4b_A 232 DEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKA 305 (452)
T ss_dssp CHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHH
T ss_pred CHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHH
Confidence 4455555555554 4555555555555 2 2355555555555555543 25555555555555 33 5555
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 200 AKRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 200 A~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
|+++|+++. ++++.+++++|.+|..
T Consensus 306 A~~~~~~Aa---~g~~~A~~~Lg~~y~~ 330 (452)
T 3e4b_A 306 AEAHFEKAV---GREVAADYYLGQIYRR 330 (452)
T ss_dssp HHHHHHTTT---TTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHh---CCCHHHHHHHHHHHHC
Confidence 555555555 5555555555555544
No 199
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.62 E-value=5.5e-07 Score=68.78 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHH---HHHHHHHHHhhC-C-CCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKE---ALEFVKRLIDIE-P-NEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~e---Ai~~l~kai~l~-P-~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
...+++.|++.+..++.+.++.+.+|+.+.+.++..+ +|..++.+++.+ | ..-+..+.+|..++.+|+|++|.++
T Consensus 17 l~~~~~~y~~e~~~~~~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~ 96 (126)
T 1nzn_A 17 LLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKY 96 (126)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 5678889999999899999999999999999888776 999999999987 5 4568999999999999999999999
Q ss_pred HHHHHHHCCCCHHHHHHH
Q 026642 204 FKDILKERPLLLRALHDL 221 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~l 221 (235)
++.+|+.+|+|..+..-.
T Consensus 97 ~~~lL~~eP~n~QA~~Lk 114 (126)
T 1nzn_A 97 VRGLLQTEPQNNQAKELE 114 (126)
T ss_dssp HHHHHHHCTTCHHHHHHH
T ss_pred HHHHHHhCCCCHHHHHHH
Confidence 999999999996555433
No 200
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.59 E-value=2.9e-07 Score=84.03 Aligned_cols=104 Identities=13% Similarity=0.049 Sum_probs=83.1
Q ss_pred HHHhcCCHHHHHHHHHHHHHh-----CCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEK-----EPRN---VEALKVVMQGNMRRGRNKEALEFVKRLIDI-----EPNEV---EWKL 185 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~-----~P~~---~~a~~~la~~~~~~g~~~eAi~~l~kai~l-----~P~~~---~a~~ 185 (235)
+....+.+++|+..++++|+. .|++ +..+..+|.+|..+|+|++|+.+++++++. .|+++ ..++
T Consensus 296 ~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~ 375 (429)
T 3qwp_A 296 ELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVM 375 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHH
Confidence 344566899999999999975 3444 467889999999999999999999999974 35554 5688
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHH-----HCCCCH---HHHHHHHHHH
Q 026642 186 LQALCYELMGKLSTAKRLFKDILK-----ERPLLL---RALHDLGRYV 225 (235)
Q Consensus 186 ~lA~~~~~~g~~~~A~~~l~kaL~-----~~P~~~---~a~~~l~~~~ 225 (235)
++|.+|..+|++++|+..|+++++ .-|+++ .++.+++.+.
T Consensus 376 nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~ 423 (429)
T 3qwp_A 376 KVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREHSLIEDLILLLEECD 423 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHH
Confidence 999999999999999999999987 357774 4445555544
No 201
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.56 E-value=4.3e-07 Score=65.46 Aligned_cols=54 Identities=26% Similarity=0.343 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVE 182 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~ 182 (235)
.++|+..++++|+.||+++.++..+|..+++.|+|++|+.+++++++.+|+++.
T Consensus 25 ~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~~~ 78 (93)
T 3bee_A 25 TDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPNLD 78 (93)
T ss_dssp CHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTTCC
T ss_pred CHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCcc
Confidence 589999999999999999999999999999999999999999999999999433
No 202
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=98.55 E-value=5.9e-07 Score=81.76 Aligned_cols=95 Identities=14% Similarity=0.084 Sum_probs=85.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc----CCHHHHHHHHHHHHhhCCCCHHHHHHHHHH-H--HHcCCHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRR----GRNKEALEFVKRLIDIEPNEVEWKLLQALC-Y--ELMGKLSTA 200 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~----g~~~eAi~~l~kai~l~P~~~~a~~~lA~~-~--~~~g~~~~A 200 (235)
+.++|+++|+++++.++.++..+..+|.+|... +++++|+++|+++. |+++.+++.+|.+ | ...|++++|
T Consensus 194 ~~~~A~~~~~~aa~~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa---~g~~~a~~~Lg~~~~~~~~~~d~~~A 270 (452)
T 3e4b_A 194 QQAELLKQMEAGVSRGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA---PGYPASWVSLAQLLYDFPELGDVEQM 270 (452)
T ss_dssp HHHHHHHHHHHHHHTTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG---GGSTHHHHHHHHHHHHSGGGCCHHHH
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHhCCCCCCHHHH
Confidence 578999999999999999999999999999765 79999999999997 8999999999998 4 578999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHhh
Q 026642 201 KRLFKDILKERPLLLRALHDLGRYVSM 227 (235)
Q Consensus 201 ~~~l~kaL~~~P~~~~a~~~l~~~~~~ 227 (235)
+++|+++.+. ++..+++++|.+|..
T Consensus 271 ~~~~~~Aa~~--g~~~A~~~Lg~~y~~ 295 (452)
T 3e4b_A 271 MKYLDNGRAA--DQPRAELLLGKLYYE 295 (452)
T ss_dssp HHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHC--CCHHHHHHHHHHHHc
Confidence 9999999865 489999999999874
No 203
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.44 E-value=1.3e-06 Score=77.21 Aligned_cols=109 Identities=15% Similarity=0.129 Sum_probs=79.5
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCH-----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC------
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNV-----------------EALKVVMQGNMRRGRNKEALEFVKRLIDIEPN------ 179 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~-----------------~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~------ 179 (235)
....+++++|++.|.++++.+++.. .++..+|.+|...|++++|+++++++++..+.
T Consensus 14 l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 93 (434)
T 4b4t_Q 14 LVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKT 93 (434)
T ss_dssp HHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHH
T ss_pred HHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHH
Confidence 3445679999999999999887654 36888999999999999999888877664322
Q ss_pred ----------------------------------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CCC
Q 026642 180 ----------------------------------------EVEWKLLQALCYELMGKLSTAKRLFKDILKE------RPL 213 (235)
Q Consensus 180 ----------------------------------------~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~------~P~ 213 (235)
....+..+|.+|...|+|++|...+++++.. .+.
T Consensus 94 ~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~ 173 (434)
T 4b4t_Q 94 VKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPS 173 (434)
T ss_dssp HHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchh
Confidence 1345556788888888888888888777664 222
Q ss_pred CHHHHHHHHHHHhhchhh
Q 026642 214 LLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 214 ~~~a~~~l~~~~~~~~~~ 231 (235)
.+.++..++.+|...++.
T Consensus 174 ~~~~~~~~~~~~~~~~~~ 191 (434)
T 4b4t_Q 174 LVDVHLLESKVYHKLRNL 191 (434)
T ss_dssp HHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHhCcH
Confidence 266777777777766653
No 204
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.43 E-value=6.1e-07 Score=78.65 Aligned_cols=82 Identities=22% Similarity=0.171 Sum_probs=76.5
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026642 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP--NEVEWKLLQALCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 132 A~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P--~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~ 209 (235)
|+..+++.++..+.+..++..+|.++...|++++|++++++.+..+| ++.+++...+.+|..+|+.++|.+.++++.+
T Consensus 85 a~~~l~~l~~~~~~~~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~ 164 (310)
T 3mv2_B 85 NIEELENLLKDKQNSPYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTN 164 (310)
T ss_dssp CCHHHHHTTTTSCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 78889998888777788888999999999999999999999999997 8899999999999999999999999999999
Q ss_pred HCCC
Q 026642 210 ERPL 213 (235)
Q Consensus 210 ~~P~ 213 (235)
.+|+
T Consensus 165 ~~~d 168 (310)
T 3mv2_B 165 AIED 168 (310)
T ss_dssp HSCH
T ss_pred cCcc
Confidence 9993
No 205
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.37 E-value=4.1e-06 Score=60.88 Aligned_cols=69 Identities=16% Similarity=0.147 Sum_probs=60.0
Q ss_pred HHHHhcCCHHHHHHHHHHHHHhC-------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 026642 121 EKRDALMGKSEVEEMFEKLLEKE-------PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQAL 189 (235)
Q Consensus 121 e~~~~~~~~~eA~~~~e~aL~~~-------P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~ 189 (235)
......+++.+|+.+|+++++.. ....+.+..+|.++.+.|++++|+.+++++++++|++..+..+++.
T Consensus 13 ~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~n~~~ 88 (104)
T 2v5f_A 13 KVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKY 88 (104)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred HHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHhhHHH
Confidence 34445667999999999999863 3568899999999999999999999999999999999999888873
No 206
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=98.32 E-value=3.2e-06 Score=74.10 Aligned_cols=103 Identities=10% Similarity=0.046 Sum_probs=83.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC----CHHHHHHH--HH
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEP--RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN----EVEWKLLQ--AL 189 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P--~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~----~~~a~~~l--A~ 189 (235)
.+.......+++++|++++++.+..+| ++.+++..++.++++.|+.+.|.+.++++.+.+|+ +......+ |.
T Consensus 105 ~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~ 184 (310)
T 3mv2_B 105 LLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESY 184 (310)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHH
Confidence 344444556789999999999999987 99999999999999999999999999999999983 23334444 54
Q ss_pred HHHHcC--CHHHHHHHHHHHHHHCCC--CHHHHHH
Q 026642 190 CYELMG--KLSTAKRLFKDILKERPL--LLRALHD 220 (235)
Q Consensus 190 ~~~~~g--~~~~A~~~l~kaL~~~P~--~~~a~~~ 220 (235)
+....| ++.+|...|+++.+..|+ ....+++
T Consensus 185 v~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln 219 (310)
T 3mv2_B 185 IKFATNKETATSNFYYYEELSQTFPTWKTQLGLLN 219 (310)
T ss_dssp HHHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHH
T ss_pred HHHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHH
Confidence 466666 999999999999988887 4556666
No 207
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=98.29 E-value=2.4e-06 Score=74.10 Aligned_cols=87 Identities=15% Similarity=0.087 Sum_probs=72.7
Q ss_pred hCCCCHHHHHHHHHHHHH---c--CC------HHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHc-----CCHHHHHHH
Q 026642 142 KEPRNVEALKVVMQGNMR---R--GR------NKEALEFVKRLIDIEPN--EVEWKLLQALCYELM-----GKLSTAKRL 203 (235)
Q Consensus 142 ~~P~~~~a~~~la~~~~~---~--g~------~~eAi~~l~kai~l~P~--~~~a~~~lA~~~~~~-----g~~~~A~~~ 203 (235)
.+|+++++++-.|.+... . |. ..+|...+++++++||+ +..+|..+|.+|... |+.++|.++
T Consensus 147 ~~~~dve~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ 226 (301)
T 3u64_A 147 CTRVDVGTLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTA 226 (301)
T ss_dssp CCGGGHHHHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHH
T ss_pred cCccccHHHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHH
Confidence 467888888877776633 2 33 47899999999999999 566999999999995 999999999
Q ss_pred HHHHHHHCCCC-HHHHHHHHHHHhhc
Q 026642 204 FKDILKERPLL-LRALHDLGRYVSMT 228 (235)
Q Consensus 204 l~kaL~~~P~~-~~a~~~l~~~~~~~ 228 (235)
|+++|+++|+. ..+++.++..+...
T Consensus 227 ferAL~LnP~~~id~~v~YA~~l~~~ 252 (301)
T 3u64_A 227 FEHLTRYCSAHDPDHHITYADALCIP 252 (301)
T ss_dssp HHHHHHHCCTTCSHHHHHHHHHTTTT
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHh
Confidence 99999999975 88888888877653
No 208
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.18 E-value=5.1e-06 Score=76.14 Aligned_cols=93 Identities=10% Similarity=-0.027 Sum_probs=61.8
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
++++|++.++++ +++..|..++.++...|+|+.|..+...++ .+| +-...+..+|...|++++|+..++++
T Consensus 163 ~yq~AVea~~KA-----~~~~~Wk~v~~aCv~~~ef~lA~~~~l~L~-~~a---d~l~~lv~~Yek~G~~eEai~lLe~a 233 (449)
T 1b89_A 163 EYQAAVDGARKA-----NSTRTWKEVCFACVDGKEFRLAQMCGLHIV-VHA---DELEELINYYQDRGYFEELITMLEAA 233 (449)
T ss_dssp CHHHHHHHHHHH-----TCHHHHHHHHHHHHHTTCHHHHHHTTTTTT-TCH---HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHc-----CCchhHHHHHHHHHHcCcHHHHHHHHHHHH-hCH---hhHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 344444444444 344555555555555555555544444321 222 22334667899999999999999999
Q ss_pred HHHCCCCHHHHHHHHHHHhhch
Q 026642 208 LKERPLLLRALHDLGRYVSMTL 229 (235)
Q Consensus 208 L~~~P~~~~a~~~l~~~~~~~~ 229 (235)
+.+++.+...+.+++.+|.+-.
T Consensus 234 L~le~ah~~~ftel~il~~ky~ 255 (449)
T 1b89_A 234 LGLERAHMGMFTELAILYSKFK 255 (449)
T ss_dssp TTSTTCCHHHHHHHHHHHHTTC
T ss_pred hCCcHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999998754
No 209
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.15 E-value=7.9e-06 Score=83.73 Aligned_cols=89 Identities=11% Similarity=0.068 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
+++|++.+++ .+++++|..+|..+.+.|++++|+++|.++ +++..|..+|.++...|+|++|++.|+.+.
T Consensus 1092 ldrAiE~Aer-----vn~p~vWsqLAKAql~~G~~kEAIdsYiKA-----dD~say~eVa~~~~~lGkyEEAIeyL~mAr 1161 (1630)
T 1xi4_A 1092 LDRAYEFAER-----CNEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMAR 1161 (1630)
T ss_pred HHHHHHHHHh-----cCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-----CChHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4555555544 488999999999999999999999999886 889999999999999999999999999999
Q ss_pred HHCCCC-HHHHHHHHHHHhhch
Q 026642 209 KERPLL-LRALHDLGRYVSMTL 229 (235)
Q Consensus 209 ~~~P~~-~~a~~~l~~~~~~~~ 229 (235)
+.+++. +.. .+|.+|.+.+
T Consensus 1162 k~~~e~~Idt--~LafaYAKl~ 1181 (1630)
T 1xi4_A 1162 KKARESYVET--ELIFALAKTN 1181 (1630)
T ss_pred hhcccccccH--HHHHHHHhhc
Confidence 888553 322 3666665553
No 210
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.15 E-value=4.9e-06 Score=73.35 Aligned_cols=105 Identities=13% Similarity=0.060 Sum_probs=81.8
Q ss_pred cCCHHHHHHHHHHHHHhC------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh------CCCCHHHHHHHHHHHHH
Q 026642 126 LMGKSEVEEMFEKLLEKE------PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI------EPNEVEWKLLQALCYEL 193 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~------P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l------~P~~~~a~~~lA~~~~~ 193 (235)
.+.+++|+..++++++.. +.-..++..+|.+|...|+|++|+..+++++.. .+...+++...|.+|..
T Consensus 108 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (434)
T 4b4t_Q 108 PDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHK 187 (434)
T ss_dssp CSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHH
Confidence 346789999999888752 233678999999999999999999999999875 33346889999999999
Q ss_pred cCCHHHHHHHHHHHHHHCCC---C----HHHHHHHHHHHhhchh
Q 026642 194 MGKLSTAKRLFKDILKERPL---L----LRALHDLGRYVSMTLQ 230 (235)
Q Consensus 194 ~g~~~~A~~~l~kaL~~~P~---~----~~a~~~l~~~~~~~~~ 230 (235)
.|++++|...+++++...+. . ...+...|.++...++
T Consensus 188 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (434)
T 4b4t_Q 188 LRNLAKSKASLTAARTAANSIYCPTQTVAELDLMSGILHCEDKD 231 (434)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSSSC
T ss_pred hCcHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999886532 2 3445555655544443
No 211
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.09 E-value=9.2e-06 Score=63.96 Aligned_cols=63 Identities=25% Similarity=0.312 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKE-P-RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~-P-~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~ 191 (235)
.++++.+++++++.+ | ++.++++.||..|++.|+|++|.++++++++.+|++.++...+-.+-
T Consensus 51 ~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie 115 (152)
T 1pc2_A 51 IRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 115 (152)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 578999999999998 7 67999999999999999999999999999999999999988776654
No 212
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.05 E-value=2.5e-05 Score=80.13 Aligned_cols=103 Identities=7% Similarity=0.011 Sum_probs=84.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--------------------
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP-------------------- 178 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P-------------------- 178 (235)
..+...+.+.+++|...|.++ ..|..+|.+|.+.|++++|+++++++...++
T Consensus 1201 iGd~le~eg~YeeA~~~Y~kA--------~ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef~LA~~c 1272 (1630)
T 1xi4_A 1201 VGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMC 1272 (1630)
T ss_pred HHHHHHhcCCHHHHHHHHHhh--------hHHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHHHHHHHH
Confidence 445555567789999998875 6899999999999999999999998855443
Q ss_pred -----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhch
Q 026642 179 -----NEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTL 229 (235)
Q Consensus 179 -----~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~ 229 (235)
.+++.+..++..|...|.|++|+.+++++|.+++.+...+..++.+|.+-.
T Consensus 1273 gl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1273 GLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFK 1328 (1630)
T ss_pred HHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhHhHHHHHHHHHHHhCC
Confidence 134455577788999999999999999999999999999999998887643
No 213
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.04 E-value=1.2e-05 Score=74.54 Aligned_cols=97 Identities=8% Similarity=0.054 Sum_probs=79.4
Q ss_pred chHHHHHHHHhcCCHHHHHHHHHHHHHh-----C---CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCH
Q 026642 115 ASENLKEKRDALMGKSEVEEMFEKLLEK-----E---PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI-----EPNEV 181 (235)
Q Consensus 115 ~~~~~~e~~~~~~~~~eA~~~~e~aL~~-----~---P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l-----~P~~~ 181 (235)
....+.......+++++|+..++++|+. . |+-+..+.+||.+|..+|++++|+..|++++++ .|+.+
T Consensus 353 ~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp 432 (490)
T 3n71_A 353 LLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHP 432 (490)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 3444555666678899999999999975 3 444567899999999999999999999999974 56765
Q ss_pred ---HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Q 026642 182 ---EWKLLQALCYELMGKLSTAKRLFKDILKER 211 (235)
Q Consensus 182 ---~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~ 211 (235)
+....++.++..+|+|++|...|+++.+..
T Consensus 433 ~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~~ 465 (490)
T 3n71_A 433 ITKDLEAMRMQTEMELRMFRQNEFMYHKMREAA 465 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455678999999999999999999986644
No 214
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.97 E-value=4.9e-05 Score=73.20 Aligned_cols=80 Identities=10% Similarity=0.073 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHH-HHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026642 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEAL-EFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 131 eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi-~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~ 209 (235)
.....|+++|...|.+++.|...+..+...|+.++|. +.|++++...|.+...|+.++.++...|++++|.+.|+++++
T Consensus 327 Rv~~~Ye~aL~~~p~~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~l~ 406 (679)
T 4e6h_A 327 RMTYVYMQAAQHVCFAPEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSCID 406 (679)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999997 999999999999999999999999999999999999999997
Q ss_pred H
Q 026642 210 E 210 (235)
Q Consensus 210 ~ 210 (235)
.
T Consensus 407 ~ 407 (679)
T 4e6h_A 407 R 407 (679)
T ss_dssp H
T ss_pred H
Confidence 5
No 215
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.96 E-value=4e-05 Score=61.03 Aligned_cols=108 Identities=18% Similarity=0.127 Sum_probs=81.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhCCCCH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-----------
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKEPRNV---------EALKVVMQGNMRRGRNKEALEFVKRLIDIE----------- 177 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~P~~~---------~a~~~la~~~~~~g~~~eAi~~l~kai~l~----------- 177 (235)
...+...+.+.++.|+-....++....++. +++..+|.+++.+|+|..|+..|++++.+.
T Consensus 25 dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~ 104 (167)
T 3ffl_A 25 DHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRP 104 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 344555667779999988887666543333 488999999999999999999999987532
Q ss_pred --------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHh
Q 026642 178 --------------PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226 (235)
Q Consensus 178 --------------P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~ 226 (235)
+.+.+..+..|.||...|++++|+..++.+- ..-..+.+...||.+|.
T Consensus 105 ~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~Ip-~k~Rt~kvnm~LakLy~ 166 (167)
T 3ffl_A 105 STGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGIP-SRQRTPKINMLLANLYK 166 (167)
T ss_dssp ------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTSC-GGGCCHHHHHHHHHHCC
T ss_pred cccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcCC-chhcCHHHHHHHHHHhc
Confidence 1124788999999999999999999987652 22234667777776664
No 216
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.93 E-value=0.00012 Score=56.23 Aligned_cols=88 Identities=8% Similarity=0.023 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 026642 131 EVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN---KEALEFVKRLIDIEPNE-VEWKLLQALCYELMGKLSTAKRLFKD 206 (235)
Q Consensus 131 eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~---~eAi~~l~kai~l~P~~-~~a~~~lA~~~~~~g~~~~A~~~l~k 206 (235)
..++.|++-+ .+.-.+++.+.+|+.+.+.++. .++|..++.+++.+|.. -+.++.+|..++.+|+|++|.++.+.
T Consensus 25 ~l~~qy~~E~-~~~vs~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~ 103 (134)
T 3o48_A 25 ILRQQVVSEG-GPTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDT 103 (134)
T ss_dssp HHHHHHHHTT-GGGSCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHh-CCCCChhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3444554433 3334689999999999998765 47999999999999855 78999999999999999999999999
Q ss_pred HHHHCCCCHHHHH
Q 026642 207 ILKERPLLLRALH 219 (235)
Q Consensus 207 aL~~~P~~~~a~~ 219 (235)
+|+.+|+|..+..
T Consensus 104 lL~~eP~N~QA~~ 116 (134)
T 3o48_A 104 LFEHERNNKQVGA 116 (134)
T ss_dssp HHTTCTTCHHHHH
T ss_pred HHhhCCCCHHHHH
Confidence 9999999955543
No 217
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.90 E-value=0.00048 Score=53.44 Aligned_cols=86 Identities=8% Similarity=0.038 Sum_probs=71.1
Q ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCH---HHHHHHHHHHHhhCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 132 VEEMFEKLLEKEPRNVEALKVVMQGNMRRGRN---KEALEFVKRLIDIEPNE-VEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 132 A~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~---~eAi~~l~kai~l~P~~-~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
.++.|+.-+. +.-.++..+.+|+.+.+..+. .++|..++.+++.+|.. -+..+.+|..++.+|+|++|.++.+.+
T Consensus 25 lr~qY~~E~~-~~vs~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~l 103 (144)
T 1y8m_A 25 LRQQVVSEGG-PTATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTL 103 (144)
T ss_dssp HHHHHHHTTS-TTSCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcc-CCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3444444322 356889999999999998765 47999999999999965 678899999999999999999999999
Q ss_pred HHHCCCCHHHH
Q 026642 208 LKERPLLLRAL 218 (235)
Q Consensus 208 L~~~P~~~~a~ 218 (235)
|+.+|+|..+.
T Consensus 104 L~~eP~n~QA~ 114 (144)
T 1y8m_A 104 FEHERNNKQVG 114 (144)
T ss_dssp HHTCCCCHHHH
T ss_pred HhcCCCcHHHH
Confidence 99999995444
No 218
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.85 E-value=0.0002 Score=64.09 Aligned_cols=96 Identities=16% Similarity=0.089 Sum_probs=71.9
Q ss_pred HHHHHHhCCCCHHHHHHH--HHHHHHcCC---HHHHHHHHHHHHhhCCCCHHHHHHHHH---------------------
Q 026642 136 FEKLLEKEPRNVEALKVV--MQGNMRRGR---NKEALEFVKRLIDIEPNEVEWKLLQAL--------------------- 189 (235)
Q Consensus 136 ~e~aL~~~P~~~~a~~~l--a~~~~~~g~---~~eAi~~l~kai~l~P~~~~a~~~lA~--------------------- 189 (235)
.+++...-|.+.++|... |..++..++ +.+|+.+|++++++||+++.++..++.
T Consensus 183 ~~r~~~~~p~~~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~ 262 (372)
T 3ly7_A 183 QETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNT 262 (372)
T ss_dssp HHHHHHHSCSSGGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHH
Confidence 334556678888887664 455555544 579999999999999998877775433
Q ss_pred -----------------------HHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 190 -----------------------CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 190 -----------------------~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
++...|++++|+..+++++.++|+ ..+|..+|.++.-.++.+
T Consensus 263 a~~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~s-~~a~~llG~~~~~~G~~~ 327 (372)
T 3ly7_A 263 EIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMS-WLNYVLLGKVYEMKGMNR 327 (372)
T ss_dssp HHHHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHCCCHH
Confidence 344579999999999999999975 667777777777666643
No 219
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.80 E-value=3.5e-05 Score=70.34 Aligned_cols=75 Identities=16% Similarity=0.031 Sum_probs=63.0
Q ss_pred HcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCC---HHHHHHHH
Q 026642 159 RRGRNKEALEFVKRLIDI-----EPNEV---EWKLLQALCYELMGKLSTAKRLFKDILKE-----RPLL---LRALHDLG 222 (235)
Q Consensus 159 ~~g~~~eAi~~l~kai~l-----~P~~~---~a~~~lA~~~~~~g~~~~A~~~l~kaL~~-----~P~~---~~a~~~l~ 222 (235)
..|+|++|+..|++++++ .|+++ ..+.++|.+|..+|+|++|+.+++++|+. -|++ ...+.++|
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 468999999999999984 56665 56788999999999999999999999974 3444 77889999
Q ss_pred HHHhhchhhcc
Q 026642 223 RYVSMTLQIQS 233 (235)
Q Consensus 223 ~~~~~~~~~~~ 233 (235)
.+|...++.++
T Consensus 390 ~~~~~qg~~~e 400 (433)
T 3qww_A 390 RLYMGLENKAA 400 (433)
T ss_dssp HHHHHTTCHHH
T ss_pred HHHHhccCHHH
Confidence 99998887543
No 220
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.77 E-value=0.0002 Score=68.87 Aligned_cols=97 Identities=13% Similarity=0.076 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK---LSTAKRLFKD 206 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~---~~~A~~~l~k 206 (235)
.+.+..|++.+..||.|.+.|..++......++++.|...|++++...|.....|...+......|+ ++.+...|++
T Consensus 49 ~d~i~~lE~~l~~np~d~~~W~~yi~~~~~~~~~~~aR~vyEraL~~fP~~~~lW~~Yi~~E~~~~~~~~~~~v~~lfeR 128 (679)
T 4e6h_A 49 SDVIGKLNDMIEEQPTDIFLYVKLLKHHVSLKQWKQVYETFDKLHDRFPLMANIWCMRLSLEFDKMEELDAAVIEPVLAR 128 (679)
T ss_dssp SCHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTC--CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCcchHHHHHHHHHH
Confidence 4567789999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHCC--CCHHHHHHHHHHHh
Q 026642 207 ILKERP--LLLRALHDLGRYVS 226 (235)
Q Consensus 207 aL~~~P--~~~~a~~~l~~~~~ 226 (235)
++...| .++..|........
T Consensus 129 al~~~~~~~sv~LW~~Yl~f~~ 150 (679)
T 4e6h_A 129 CLSKELGNNDLSLWLSYITYVR 150 (679)
T ss_dssp HTCSSSCCCCHHHHHHHHHHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHHH
Confidence 999994 56777766655443
No 221
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.74 E-value=9.7e-05 Score=67.22 Aligned_cols=80 Identities=8% Similarity=-0.059 Sum_probs=65.9
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhh-----CCCCH---HHHHHHHHHHHHcCCHHHHHHHHHHHHHH-----CCCC---HHH
Q 026642 154 MQGNMRRGRNKEALEFVKRLIDI-----EPNEV---EWKLLQALCYELMGKLSTAKRLFKDILKE-----RPLL---LRA 217 (235)
Q Consensus 154 a~~~~~~g~~~eAi~~l~kai~l-----~P~~~---~a~~~lA~~~~~~g~~~~A~~~l~kaL~~-----~P~~---~~a 217 (235)
..-+..+|+|++|++.++++++. .|+++ ..+.++|.+|..+|+|++|+.+++++|+. -|++ ...
T Consensus 294 ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~ 373 (429)
T 3qwp_A 294 IEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQ 373 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHH
T ss_pred HHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHH
Confidence 44456789999999999999975 45554 56888999999999999999999999874 3555 677
Q ss_pred HHHHHHHHhhchhhcc
Q 026642 218 LHDLGRYVSMTLQIQS 233 (235)
Q Consensus 218 ~~~l~~~~~~~~~~~~ 233 (235)
+.++|.+|...++.++
T Consensus 374 l~nLa~~~~~~g~~~e 389 (429)
T 3qwp_A 374 VMKVGKLQLHQGMFPQ 389 (429)
T ss_dssp HHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHhcCCHHH
Confidence 8999999998887543
No 222
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.66 E-value=5.7e-06 Score=75.81 Aligned_cols=92 Identities=11% Similarity=0.051 Sum_probs=0.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
+.++|.+.+++. +++++|..+|.++.+.|++++|++.|.++ +++..+...+.++...|++++|+++++.+
T Consensus 18 ~ld~A~~fae~~-----~~~~vWs~La~A~l~~g~~~eAIdsfika-----~D~~~y~~V~~~ae~~g~~EeAi~yl~~a 87 (449)
T 1b89_A 18 NLDRAYEFAERC-----NEPAVWSQLAKAQLQKGMVKEAIDSYIKA-----DDPSSYMEVVQAANTSGNWEELVKYLQMA 87 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhC-----CChHHHHHHHHHHHHcCCHHHHHHHHHcC-----CCHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 367777777776 34568888888888888888888888763 45667777888888888888888888877
Q ss_pred HHHCCCCHHHHHHHHHHHhhchh
Q 026642 208 LKERPLLLRALHDLGRYVSMTLQ 230 (235)
Q Consensus 208 L~~~P~~~~a~~~l~~~~~~~~~ 230 (235)
.+..++ +.+...++.+|.+.++
T Consensus 88 rk~~~~-~~i~~~Li~~Y~Klg~ 109 (449)
T 1b89_A 88 RKKARE-SYVETELIFALAKTNR 109 (449)
T ss_dssp ----------------------C
T ss_pred HHhCcc-chhHHHHHHHHHHhCC
Confidence 775333 5556666666666654
No 223
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=97.46 E-value=0.00027 Score=53.73 Aligned_cols=62 Identities=26% Similarity=0.328 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHhC-C-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKE-P-RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191 (235)
Q Consensus 130 ~eA~~~~e~aL~~~-P-~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~ 191 (235)
.+++.+++..++.+ | ..-+.++.||..+++.|+|++|.++++.+++.+|++.++..++..+-
T Consensus 55 ~~GI~lLe~l~~~~~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~ 118 (126)
T 1nzn_A 55 RKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID 118 (126)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 56899999999987 5 67789999999999999999999999999999999999988877654
No 224
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=97.37 E-value=0.00069 Score=51.90 Aligned_cols=63 Identities=17% Similarity=0.243 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEP-RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYE 192 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P-~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~ 192 (235)
.+++.+++..++.+| ..-+.++.||..+.+.|+|++|.++.+.+++.+|+|.++..++..+-.
T Consensus 60 ~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~ 123 (134)
T 3o48_A 60 RLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED 123 (134)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence 578999999999998 457899999999999999999999999999999999999888777653
No 225
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.28 E-value=0.0013 Score=51.02 Aligned_cols=62 Identities=18% Similarity=0.232 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEP-RNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY 191 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P-~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~ 191 (235)
.+++.+++..++.+| ..-+.++.||..+++.|+|++|.++.+.+++.+|+|.++..++..+-
T Consensus 59 ~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie 121 (144)
T 1y8m_A 59 RLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVE 121 (144)
T ss_dssp HHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHH
Confidence 578999999999988 56789999999999999999999999999999999999988876654
No 226
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.17 E-value=0.0051 Score=52.52 Aligned_cols=91 Identities=12% Similarity=0.005 Sum_probs=74.2
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH----------------------
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV---------------------- 181 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~---------------------- 181 (235)
...+..++|++..+..++.+|.|++....|.++++-.|+|+.|.+.++-+.+++|+..
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~R~~vfaG 87 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQARKDFAQG 87 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHHHHHHHcC
Confidence 3456689999999999999999999999999999999999999999999999998832
Q ss_pred ----------HHHH---HHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Q 026642 182 ----------EWKL---LQALCYELMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 182 ----------~a~~---~lA~~~~~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
..|. ..|......|+.++|.+.-+++++..|..
T Consensus 88 ~~~P~~~g~~~~w~~~ll~Al~~~~~G~~~~A~~lr~~A~e~ap~~ 133 (273)
T 1zbp_A 88 AATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEK 133 (273)
T ss_dssp CCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHhcCccc
Confidence 1111 22445556688888888888888877653
No 227
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=97.10 E-value=0.0026 Score=54.36 Aligned_cols=72 Identities=17% Similarity=0.206 Sum_probs=62.9
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHhh
Q 026642 156 GNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL---LRALHDLGRYVSM 227 (235)
Q Consensus 156 ~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~---~~a~~~l~~~~~~ 227 (235)
..++.|+.++|++.++..|+.+|.|...+..+.+++.-.|++++|.+.++-+.+++|+. +..|.++..+...
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~a~~yr~lI~aE~~ 80 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHLVKAAQA 80 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999 3345555544443
No 228
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=97.07 E-value=0.0021 Score=50.35 Aligned_cols=88 Identities=10% Similarity=0.040 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHH
Q 026642 130 SEVEEMFEKLLEKEPR--------NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAK 201 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~--------~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~ 201 (235)
++-++.|++++..-|- .+..|...+.. ...++.++|.+.|+.++.+....+..|...|+-...+|+.++|.
T Consensus 36 ~rlrd~YerAia~~Pp~k~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kAR 114 (161)
T 4h7y_A 36 NKLIGRYSQAIEALPPDKYGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSK 114 (161)
T ss_dssp HHHHHHHHHHHHHSCGGGGTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHHHHHHcCCccccccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHH
Confidence 7778999999987553 23445555544 45689999999999999998888999999999999999999999
Q ss_pred HHHHHHHHHCCCCHHHH
Q 026642 202 RLFKDILKERPLLLRAL 218 (235)
Q Consensus 202 ~~l~kaL~~~P~~~~a~ 218 (235)
+.+.+++.+.|.....+
T Consensus 115 kILg~AiG~~~k~~~~l 131 (161)
T 4h7y_A 115 QLLQKAVERGAVPLEML 131 (161)
T ss_dssp HHHHHHHHTTCBCHHHH
T ss_pred HHHHHHhccCCCcHHHH
Confidence 99999999999875443
No 229
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.03 E-value=0.0065 Score=54.27 Aligned_cols=84 Identities=13% Similarity=0.058 Sum_probs=69.0
Q ss_pred cCCHHHHHHHHHHHHHhCCCC----------------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 026642 126 LMGKSEVEEMFEKLLEKEPRN----------------------VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~----------------------~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a 183 (235)
.++.++|.+.+++++...... ..+...++..+...|++++|+..+++++..+|-+-.+
T Consensus 128 ~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~ 207 (388)
T 2ff4_A 128 AGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYREPL 207 (388)
T ss_dssp TTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHH
Confidence 346778888888888764221 0234456667788999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026642 184 KLLQALCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 184 ~~~lA~~~~~~g~~~~A~~~l~kaL~ 209 (235)
|..+..+|+..|+..+|.+.|+++-.
T Consensus 208 ~~~lm~al~~~Gr~~~Al~~y~~~r~ 233 (388)
T 2ff4_A 208 WTQLITAYYLSDRQSDALGAYRRVKT 233 (388)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999999999988643
No 230
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=97.01 E-value=0.013 Score=53.99 Aligned_cols=80 Identities=10% Similarity=0.102 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKE-PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE-PNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 130 ~eA~~~~e~aL~~~-P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~-P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
++|.+.|++..+.. .-|...|..+...|.+.|++++|++.+++..+.. .-+...|..+-..|...|+.++|.+.|++.
T Consensus 87 ~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 87 SRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHH
Confidence 34444444443321 1134444445555555555555555555444432 112344444444444555555555555444
Q ss_pred HH
Q 026642 208 LK 209 (235)
Q Consensus 208 L~ 209 (235)
.+
T Consensus 167 ~~ 168 (501)
T 4g26_A 167 VE 168 (501)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 231
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.78 E-value=0.016 Score=53.25 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQ 187 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~l 187 (235)
+.....|++++...|.+++.|...+..+...|+.++|.+.|++++.. |.+...|+..
T Consensus 196 ~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~~~y 252 (493)
T 2uy1_A 196 SRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLSLYY 252 (493)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHHHHH
Confidence 34567999999999999999999999999999999999999999999 8875544433
No 232
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=96.69 E-value=0.019 Score=52.74 Aligned_cols=93 Identities=15% Similarity=0.098 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRG-RNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g-~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
++.+.|...|+++ +..+.....|...+.+....| +.+.|...|+++++..|+++..|...+......|+.+.|...|+
T Consensus 300 ~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~e 378 (493)
T 2uy1_A 300 RGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDEENARALFK 378 (493)
T ss_dssp HCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3578899999999 433346678877787777666 69999999999999999999988888888899999999999998
Q ss_pred HHHHHCCCCHHHHHHHHHH
Q 026642 206 DILKERPLLLRALHDLGRY 224 (235)
Q Consensus 206 kaL~~~P~~~~a~~~l~~~ 224 (235)
++ +.....|......
T Consensus 379 r~----~k~~~lw~~~~~f 393 (493)
T 2uy1_A 379 RL----EKTSRMWDSMIEY 393 (493)
T ss_dssp HS----CCBHHHHHHHHHH
T ss_pred HH----HHHHHHHHHHHHH
Confidence 87 3345555444443
No 233
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=96.59 E-value=0.026 Score=44.20 Aligned_cols=57 Identities=9% Similarity=0.113 Sum_probs=44.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a 183 (235)
++.++|.+.|+.++....+.+..|...|+-..++|+.+.|.+.+.+++...|...+.
T Consensus 74 ~D~d~aR~vy~~a~~~hKkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 74 QEPDDARDYFQMARANCKKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp HCGGGCHHHHHHHHHHCTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred cCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 456778888888877777777888888888888888888888888888888775544
No 234
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=96.53 E-value=0.013 Score=54.36 Aligned_cols=81 Identities=14% Similarity=0.045 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhc
Q 026642 149 ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMT 228 (235)
Q Consensus 149 a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~ 228 (235)
.+..||.+.--...++.|..+|.+|+.+.|++...++.+|.+....|+.-+|.-+|-+++....-+..+..++..++.+.
T Consensus 154 ~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~~ 233 (497)
T 1ya0_A 154 CLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKA 233 (497)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHHH
Confidence 56678888888888999999999999999999999999999999999999999999999987777888999988888764
Q ss_pred h
Q 026642 229 L 229 (235)
Q Consensus 229 ~ 229 (235)
.
T Consensus 234 ~ 234 (497)
T 1ya0_A 234 L 234 (497)
T ss_dssp T
T ss_pred H
Confidence 3
No 235
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.0085 Score=58.20 Aligned_cols=59 Identities=15% Similarity=0.078 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 149 ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 149 a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
.+..-+.-+...|+|+-|+++.++++..-|.+-..|+.||.||..+|+|+.|.-.++.+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 34444555677899999999999999999999999999999999999999999888766
No 236
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=96.36 E-value=0.084 Score=48.60 Aligned_cols=93 Identities=11% Similarity=-0.001 Sum_probs=76.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHcC
Q 026642 118 NLKEKRDALMGKSEVEEMFEKLLEKE-PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP-NEVEWKLLQALCYELMG 195 (235)
Q Consensus 118 ~~~e~~~~~~~~~eA~~~~e~aL~~~-P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P-~~~~a~~~lA~~~~~~g 195 (235)
.+....-..++.++|.++|++..+.. .-|...|..+...|.+.|+.++|.+.+++..+..- -+...|..+-.+|...|
T Consensus 110 ~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g 189 (501)
T 4g26_A 110 NGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTK 189 (501)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCC
Confidence 34445555667899999999988753 22688999999999999999999999999987542 24677888899999999
Q ss_pred CHHHHHHHHHHHHHH
Q 026642 196 KLSTAKRLFKDILKE 210 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~ 210 (235)
+.++|.+.|++.-+.
T Consensus 190 ~~d~A~~ll~~Mr~~ 204 (501)
T 4g26_A 190 NADKVYKTLQRLRDL 204 (501)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999998664
No 237
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.34 E-value=0.012 Score=46.58 Aligned_cols=85 Identities=9% Similarity=0.024 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---------HHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC-------
Q 026642 149 ALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEV---------EWKLLQALCYELMGKLSTAKRLFKDILKERP------- 212 (235)
Q Consensus 149 a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~---------~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P------- 212 (235)
++..-+..++..|.|+.|+-..+.++.+..+++ +....+|.+++..|+|..|...|+++|+..-
T Consensus 22 ~l~dqik~L~d~~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s 101 (167)
T 3ffl_A 22 NVIDHVRDMAAAGLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSK 101 (167)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 445556677889999999999999887653333 4778899999999999999999999876432
Q ss_pred ------------------CCHHHHHHHHHHHhhchhhcc
Q 026642 213 ------------------LLLRALHDLGRYVSMTLQIQS 233 (235)
Q Consensus 213 ------------------~~~~a~~~l~~~~~~~~~~~~ 233 (235)
.+.+..|.++.+|.+.++..+
T Consensus 102 ~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~ 140 (167)
T 3ffl_A 102 VRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKD 140 (167)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHTTCHHH
T ss_pred ccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHH
Confidence 113677889999988877543
No 238
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.41 E-value=0.074 Score=51.64 Aligned_cols=103 Identities=10% Similarity=0.047 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH--cC-CHHHHHHHHHHHHh--------hCCCCHH----------HHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMR--RG-RNKEALEFVKRLID--------IEPNEVE----------WKLLQ 187 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~--~g-~~~eAi~~l~kai~--------l~P~~~~----------a~~~l 187 (235)
++.|++.+++..+.+|.... +...+.+... .+ +--+|++.+.+.++ +.+.+.. ....=
T Consensus 265 ~~~a~~~le~L~~~~p~~~~-~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~LL~~Q 343 (754)
T 4gns_B 265 VDFTIDYLKGLTKKDPIHDI-YYKTAMITILDHIETKELDMITILNETLDPLLSLLNDLPPRDADSARLMNCMSDLLNIQ 343 (754)
T ss_dssp HHHHHHHHHHHHHHCGGGHH-HHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCchhH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhcccccccccccCcchHHHHHH
Confidence 47899999999999987543 3333333322 22 33467777777764 2333332 22223
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 188 ALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 188 A~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
+.-+...|+|+-|.+..++++...|.....|+.|+.+|.+.+|-+
T Consensus 344 a~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e 388 (754)
T 4gns_B 344 TNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYE 388 (754)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHH
T ss_pred HHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHH
Confidence 566778999999999999999999999999999999999998854
No 239
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=95.07 E-value=0.22 Score=39.75 Aligned_cols=78 Identities=10% Similarity=0.029 Sum_probs=54.2
Q ss_pred HhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------CCCHHHHHHH--------
Q 026642 124 DALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE--------PNEVEWKLLQ-------- 187 (235)
Q Consensus 124 ~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~--------P~~~~a~~~l-------- 187 (235)
.+.++++.|.+..++. ++...|..||...+.+|+++-|+++|+++=..+ -.+.+.+..+
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g 90 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTRE 90 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCc
Confidence 3456688888877665 788999999999999999999999998763322 1122222222
Q ss_pred -----HHHHHHcCCHHHHHHHHHH
Q 026642 188 -----ALCYELMGKLSTAKRLFKD 206 (235)
Q Consensus 188 -----A~~~~~~g~~~~A~~~l~k 206 (235)
..++..+|+++++++.|.+
T Consensus 91 ~~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 91 DFGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3456677777777777644
No 240
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=94.94 E-value=0.24 Score=43.99 Aligned_cols=79 Identities=13% Similarity=-0.044 Sum_probs=62.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhCCC----------CH------------HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Q 026642 154 MQGNMRRGRNKEALEFVKRLIDIEPN----------EV------------EWKLLQALCYELMGKLSTAKRLFKDILKER 211 (235)
Q Consensus 154 a~~~~~~g~~~eAi~~l~kai~l~P~----------~~------------~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~ 211 (235)
|......|+.++|.+.+++++.+--. .. .+...++.++...|++++|+..+++++..+
T Consensus 122 ~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~~ 201 (388)
T 2ff4_A 122 GVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEH 201 (388)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC
Confidence 33444578999999999999987522 11 222345677889999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhchhhc
Q 026642 212 PLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 212 P~~~~a~~~l~~~~~~~~~~~ 232 (235)
|.+..+|..+..++.+.++..
T Consensus 202 P~~E~~~~~lm~al~~~Gr~~ 222 (388)
T 2ff4_A 202 PYREPLWTQLITAYYLSDRQS 222 (388)
T ss_dssp TTCHHHHHHHHHHHHTTTCHH
T ss_pred CCCHHHHHHHHHHHHHcCCHH
Confidence 999999999999988877654
No 241
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.78 E-value=0.17 Score=47.84 Aligned_cols=42 Identities=10% Similarity=0.062 Sum_probs=33.1
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRL 173 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~ka 173 (235)
+++++|.+.. ..-++...|..+|..+.+.|+++.|+++|.++
T Consensus 666 ~~~~~A~~~~-----~~~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 666 GQLTLARDLL-----TDESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp TCHHHHHHHH-----TTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCHHHHHHHH-----HhhCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3445554443 34478899999999999999999999999885
No 242
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=93.67 E-value=0.7 Score=37.11 Aligned_cols=87 Identities=9% Similarity=0.048 Sum_probs=68.6
Q ss_pred HHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--h---------------CCCCHH-HH
Q 026642 123 RDALMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID--I---------------EPNEVE-WK 184 (235)
Q Consensus 123 ~~~~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~--l---------------~P~~~~-a~ 184 (235)
.--.+++..+.-.+. +-|...+.+.-..+|.+.++|..|+.+++++++ . ||.+-+ .+
T Consensus 43 LyyngEY~R~Lf~L~-----~lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy 117 (242)
T 3kae_A 43 LYLNGEYTRALFHLH-----KLNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFE 117 (242)
T ss_dssp HHHTTCHHHHHHHHH-----TCCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHH
T ss_pred hhhcchHhHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHH
Confidence 344555666655543 347788888889999999999999999999992 2 244554 45
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Q 026642 185 LLQALCYELMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 185 ~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
..+|.++...|+.++|+.++......+|-.
T Consensus 118 ~l~a~lltq~g~r~EaI~y~~~Sf~~~~lf 147 (242)
T 3kae_A 118 SLLGDLCTLSGYREEGIGHYVRSFGKSFLF 147 (242)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred HHHHHHHHHhcCHHHhhhHhhhhcCCcccc
Confidence 678999999999999999999999998875
No 243
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.89 E-value=0.64 Score=42.90 Aligned_cols=67 Identities=10% Similarity=0.021 Sum_probs=58.9
Q ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 026642 127 MGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYEL 193 (235)
Q Consensus 127 ~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~ 193 (235)
..++.|..+|++|+..+|++...+..||.+....|+.-+|+-+|-+++.-....+.++.++..++..
T Consensus 166 ~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 166 NQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK 232 (497)
T ss_dssp TCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCChhHHHHHHHHHHH
Confidence 3468999999999999999999999999999999999999999999998777777777777766654
No 244
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.56 E-value=0.16 Score=47.09 Aligned_cols=67 Identities=13% Similarity=0.253 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE-------VEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~-------~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
.+..+..+.+.|+..+.|++|.....++. .|.. ..+++.+|+++..+++|.+|.+++..++..-|.+
T Consensus 230 qa~l~nllLRnYL~~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 230 KAMLINLILRDFLNNGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHHSSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred hHHHHHHHHHHHHccCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 34578888999999999999999999995 3432 5677889999999999999999999999988765
No 245
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=92.40 E-value=2.2 Score=42.92 Aligned_cols=94 Identities=14% Similarity=0.076 Sum_probs=71.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHHHHHHHHHH
Q 026642 117 ENLKEKRDALMGKSEVEEMFEKLLEK----EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE--PNEVEWKLLQALC 190 (235)
Q Consensus 117 ~~~~e~~~~~~~~~eA~~~~e~aL~~----~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~--P~~~~a~~~lA~~ 190 (235)
..+....-..+..++|.+.|++.-+. -.-|...|..+...|++.|+.++|.+.+++..+.. | |...|..+-.+
T Consensus 131 naLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~P-DvvTYntLI~g 209 (1134)
T 3spa_A 131 LAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTP-DLLSYAAALQC 209 (1134)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCC-CHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCC-cHHHHHHHHHH
Confidence 34555666677789999988664321 23368899999999999999999999999988743 4 46667777778
Q ss_pred HHHcCC-HHHHHHHHHHHHHHC
Q 026642 191 YELMGK-LSTAKRLFKDILKER 211 (235)
Q Consensus 191 ~~~~g~-~~~A~~~l~kaL~~~ 211 (235)
+...|+ .++|.+.|++..+..
T Consensus 210 lcK~G~~~e~A~~Ll~EM~~kG 231 (1134)
T 3spa_A 210 MGRQDQDAGTIERCLEQMSQEG 231 (1134)
T ss_dssp HHHHTCCHHHHHHHHHHHHHHT
T ss_pred HHhCCCcHHHHHHHHHHHHHcC
Confidence 888887 478889999888754
No 246
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.66 E-value=4.1 Score=36.63 Aligned_cols=92 Identities=12% Similarity=0.152 Sum_probs=69.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHhC--C----CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hCCCCH----HHHH
Q 026642 119 LKEKRDALMGKSEVEEMFEKLLEKE--P----RNVEALKVVMQGNMRRGRNKEALEFVKRLID---IEPNEV----EWKL 185 (235)
Q Consensus 119 ~~e~~~~~~~~~eA~~~~e~aL~~~--P----~~~~a~~~la~~~~~~g~~~eAi~~l~kai~---l~P~~~----~a~~ 185 (235)
+..-..+.+++.+|...+.+....- . .-.+.+....++|...++|..|...+.++-. -.+..+ .++.
T Consensus 143 La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~~lk~~~~~ 222 (445)
T 4b4t_P 143 LVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYESLKLEYYN 222 (445)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcHHHHHHHHH
Confidence 3344445677999999998876431 1 1257788889999999999999999998742 233333 4566
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 186 LQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 186 ~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
..|.++...++|.+|..+|..++..
T Consensus 223 ~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 223 LLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 7899999999999999999998764
No 247
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=90.02 E-value=0.78 Score=41.18 Aligned_cols=64 Identities=9% Similarity=-0.032 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--C-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN--E-VEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~--~-~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
..++..+|..|.+.|++++|.++|.++.+.... . .+.++...+++...|++..+...++++-..
T Consensus 131 ~~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 131 AQAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SSCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 357888999999999999999999998875432 2 577888888888999999999999888554
No 248
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=89.86 E-value=2.3 Score=38.11 Aligned_cols=90 Identities=12% Similarity=0.128 Sum_probs=69.4
Q ss_pred hcCCHHHHHHHHHHHHHh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCH----HHHHHHHHHHHHcC
Q 026642 125 ALMGKSEVEEMFEKLLEK---EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEP--NEV----EWKLLQALCYELMG 195 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~---~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P--~~~----~a~~~lA~~~~~~g 195 (235)
+.+++++|.+.|.++... ..+-.+.+....++++..++|..|..+++++-.+.. .+. ......|.++...+
T Consensus 143 ~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r 222 (429)
T 4b4t_R 143 QIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVR 222 (429)
T ss_dssp HHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTS
T ss_pred HcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 445567889999887764 345678999999999999999999999999876422 222 33445678888899
Q ss_pred CHHHHHHHHHHHHHHCCCC
Q 026642 196 KLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~ 214 (235)
+|.+|...|-.++......
T Consensus 223 ~f~~Aa~~f~e~~~t~~~~ 241 (429)
T 4b4t_R 223 NFKEAAKLLVDSLATFTSI 241 (429)
T ss_dssp CHHHHHHHHHHHHHHSCCS
T ss_pred hHHHHHHHHHHHhccCCcc
Confidence 9999999998887765443
No 249
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=89.73 E-value=1.4 Score=41.73 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
..++...+.+.... ..+.+....++...++.|+++.|..+++++-........+.+-+|.++...|+.++|...|+++.
T Consensus 268 ~~~~~~~~~~~~~~-~~~~~~~e~~~r~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a 346 (618)
T 1qsa_A 268 TDEQAKWRDDAIMR-SQSTSLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLM 346 (618)
T ss_dssp CHHHHHHHHHHHHT-CCCHHHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ChHHHHHHHhcccc-CCChHHHHHHHHHHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 34566666665543 34444455555667788999999999988766445678899999999999999999999999987
Q ss_pred H
Q 026642 209 K 209 (235)
Q Consensus 209 ~ 209 (235)
+
T Consensus 347 ~ 347 (618)
T 1qsa_A 347 Q 347 (618)
T ss_dssp T
T ss_pred c
Confidence 5
No 250
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.64 E-value=0.69 Score=43.55 Aligned_cols=48 Identities=8% Similarity=-0.085 Sum_probs=39.6
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 155 QGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 155 ~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
.+....|++++|.+..+. -++...|..+|..+...|+++.|+++|.++
T Consensus 660 ~~~l~~~~~~~A~~~~~~-----~~~~~~W~~la~~al~~~~~~~A~~~y~~~ 707 (814)
T 3mkq_A 660 ELALKVGQLTLARDLLTD-----ESAEMKWRALGDASLQRFNFKLAIEAFTNA 707 (814)
T ss_dssp HHHHHHTCHHHHHHHHTT-----CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred ehhhhcCCHHHHHHHHHh-----hCcHhHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 345677888888877543 467899999999999999999999999985
No 251
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=89.50 E-value=1.5 Score=34.77 Aligned_cols=54 Identities=17% Similarity=0.009 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
|++..+. +.++.|+++.|.+..+.+ ++..-|..+|......|+++-|..+|+++
T Consensus 7 D~~~rF~---LAL~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~ 60 (177)
T 3mkq_B 7 DPHIRFD---LALEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQ 60 (177)
T ss_dssp CHHHHHH---HHHHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred ChHHHHH---HHHhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHh
Confidence 4444444 346899999999998775 67889999999999999999999999875
No 252
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=88.90 E-value=2 Score=34.53 Aligned_cols=86 Identities=19% Similarity=0.158 Sum_probs=62.8
Q ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH--H---------
Q 026642 142 KEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILK--E--------- 210 (235)
Q Consensus 142 ~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~--~--------- 210 (235)
.-|++.+....++.++.-.|+|..++-.+.+ -+-....+..+.||....+|.+|+..++++++ .
T Consensus 28 L~~~~~eY~lL~~I~LyyngEY~R~Lf~L~~-----lNT~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~ 102 (242)
T 3kae_A 28 LLPCKPEYRMLMSIVLYLNGEYTRALFHLHK-----LNTCTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDAR 102 (242)
T ss_dssp HC----CTHHHHHHHHHHTTCHHHHHHHHHT-----CCBHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHH
T ss_pred HccCChHHHhhhhhhhhhcchHhHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccc
Confidence 3556668888889999999999999877654 35688889999999999999999999999993 2
Q ss_pred ------CCCCHHHH-HHHHHHHhhchhhc
Q 026642 211 ------RPLLLRAL-HDLGRYVSMTLQIQ 232 (235)
Q Consensus 211 ------~P~~~~a~-~~l~~~~~~~~~~~ 232 (235)
||.+-+.+ .-+|.++.+.++.+
T Consensus 103 ~~~ffvd~~DkEfFy~l~a~lltq~g~r~ 131 (242)
T 3kae_A 103 IQEMFVDPGDEEFFESLLGDLCTLSGYRE 131 (242)
T ss_dssp HHTTSCCTTCHHHHHHHHHHHHHHTTCHH
T ss_pred cceeeeccchHHHHHHHHHHHHHHhcCHH
Confidence 34554443 45566666666543
No 253
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=88.88 E-value=3.5 Score=41.52 Aligned_cols=83 Identities=8% Similarity=-0.047 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH--CCCCHHHHHH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDI----EPNEVEWKLLQALCYELMGKLSTAKRLFKDILKE--RPLLLRALHD 220 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l----~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~--~P~~~~a~~~ 220 (235)
...+..+...|++.|+.++|.+.+++..+. -.-+...|+.+-..|...|+.++|.+.|++..+. .|+ .-.|-.
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD-vvTYnt 205 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD-LLSYAA 205 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC-HHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc-HHHHHH
Confidence 346888999999999999999999775432 2335888999999999999999999999999774 454 555655
Q ss_pred HHHHHhhchh
Q 026642 221 LGRYVSMTLQ 230 (235)
Q Consensus 221 l~~~~~~~~~ 230 (235)
+...+.+.++
T Consensus 206 LI~glcK~G~ 215 (1134)
T 3spa_A 206 ALQCMGRQDQ 215 (1134)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhCCC
Confidence 6556666543
No 254
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.67 E-value=4.6 Score=36.33 Aligned_cols=61 Identities=23% Similarity=0.187 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhh-C-CC----CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDI-E-PN----EVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l-~-P~----~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
.....|+.+|...|++.+|.+.+..+..- . .. -.+.+..-.++|...|++.+|...++++.
T Consensus 138 rl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~ 204 (445)
T 4b4t_P 138 RVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKIL 204 (445)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45578899999999999999999998642 1 11 14677788899999999999999999974
No 255
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=86.37 E-value=2.2 Score=40.64 Aligned_cols=51 Identities=29% Similarity=0.328 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL 197 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~ 197 (235)
.+.....|+..+..|+|.-|.+..+.++..+|++.+++..+|.+|.++|.-
T Consensus 449 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~ 499 (658)
T 2cfu_A 449 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQ 499 (658)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 456677788888999999999999999999999999999999999888853
No 256
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=86.15 E-value=1.9 Score=38.48 Aligned_cols=61 Identities=18% Similarity=0.226 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCC--CC----HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Q 026642 151 KVVMQGNMRRGRNKEALEFVKRLIDIEP--NE----VEWKLLQALCYELMGKLSTAKRLFKDILKER 211 (235)
Q Consensus 151 ~~la~~~~~~g~~~eAi~~l~kai~l~P--~~----~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~ 211 (235)
..+|.+|+..|+|.+|.+.+.++.+.-. ++ .+.+..-.++|...|++.++...|.++....
T Consensus 103 ~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~ 169 (394)
T 3txn_A 103 ARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTA 169 (394)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 3789999999999999999999887321 11 4667778899999999999999999986543
No 257
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=85.62 E-value=9 Score=34.10 Aligned_cols=91 Identities=11% Similarity=-0.077 Sum_probs=66.8
Q ss_pred HHHhcCCHHHHHHHHHHHHHh----C--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCCH----HHHHHHH
Q 026642 122 KRDALMGKSEVEEMFEKLLEK----E--PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE---PNEV----EWKLLQA 188 (235)
Q Consensus 122 ~~~~~~~~~eA~~~~e~aL~~----~--P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~---P~~~----~a~~~lA 188 (235)
-..+.+++.+|.+.+.+.++. | ..-.+.+..-.++|...|++..+...|.++.... +.++ .....-|
T Consensus 108 l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~p~i~a~i~~~~G 187 (394)
T 3txn_A 108 LYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKVQGALDLQSG 187 (394)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCCHHHHHHHHHHhh
Confidence 334566789998888887763 1 1234667777888999999999999999987643 1222 3344468
Q ss_pred HHHH-HcCCHHHHHHHHHHHHHHCC
Q 026642 189 LCYE-LMGKLSTAKRLFKDILKERP 212 (235)
Q Consensus 189 ~~~~-~~g~~~~A~~~l~kaL~~~P 212 (235)
.++. ..++|.+|...|-++++...
T Consensus 188 i~~l~~~rdyk~A~~~F~eaf~~f~ 212 (394)
T 3txn_A 188 ILHAADERDFKTAFSYFYEAFEGFD 212 (394)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHhccCHHHHHHHHHHHHhccc
Confidence 8888 89999999999998876443
No 258
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=83.42 E-value=2.7 Score=38.26 Aligned_cols=86 Identities=15% Similarity=0.211 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHh--CCCCH--------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC----------CCHH
Q 026642 129 KSEVEEMFEKLLEK--EPRNV--------------EALKVVMQGNMRRGRNKEALEFVKRLIDIEP----------NEVE 182 (235)
Q Consensus 129 ~~eA~~~~e~aL~~--~P~~~--------------~a~~~la~~~~~~g~~~eAi~~l~kai~l~P----------~~~~ 182 (235)
.+++.+.+.++... +..++ -....+-.+|++.|+..-+...+..+-.... ..+.
T Consensus 142 le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~q~v~ 221 (455)
T 3t5v_B 142 LSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIE 221 (455)
T ss_dssp HHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCccceEe
Confidence 46677777777664 11111 1234456789999999888777755433322 1357
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH-CCCC
Q 026642 183 WKLLQALCYELMGKLSTAKRLFKDILKE-RPLL 214 (235)
Q Consensus 183 a~~~lA~~~~~~g~~~~A~~~l~kaL~~-~P~~ 214 (235)
+++.+|+++...++|.+|.+.+..|+.. .|..
T Consensus 222 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 222 YRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred eeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 8889999999999999999999999998 6654
No 259
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=82.99 E-value=2.9 Score=33.65 Aligned_cols=52 Identities=15% Similarity=0.042 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH-----HHHHHHHHcCCHH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL-----LQALCYELMGKLS 198 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~-----~lA~~~~~~g~~~ 198 (235)
+...+.+|++++.+++|.+|.+++..|++..|....... .+--+-.-+|+..
T Consensus 14 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 14 VTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 567788899999999999999999999998886543222 2233445667754
No 260
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.40 E-value=9.2 Score=38.51 Aligned_cols=76 Identities=8% Similarity=-0.164 Sum_probs=57.8
Q ss_pred HHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----------------------CCCCHHHHHHHHHHHHHcC
Q 026642 139 LLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI-----------------------EPNEVEWKLLQALCYELMG 195 (235)
Q Consensus 139 aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l-----------------------~P~~~~a~~~lA~~~~~~g 195 (235)
.+..-+.++-..+.+|++++..|++++|.++++++-.- ....+.+|.....++...|
T Consensus 834 l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~ 913 (1139)
T 4fhn_B 834 LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES 913 (1139)
T ss_dssp HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTS
T ss_pred HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcC
Confidence 34445677777889999999999999999999876320 1112456677778889999
Q ss_pred CHHHHHHHHHHHHHHCCCC
Q 026642 196 KLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 196 ~~~~A~~~l~kaL~~~P~~ 214 (235)
-++.+++..+.+++..+.+
T Consensus 914 ~~~~vi~fa~lAi~~~~~~ 932 (1139)
T 4fhn_B 914 AYIDALEFSLLADASKETD 932 (1139)
T ss_dssp CCHHHHHHHHHHHHHCCSC
T ss_pred CHHHHHHHHHHHHHhccCC
Confidence 9999999999999876544
No 261
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=82.07 E-value=1.9 Score=29.75 Aligned_cols=32 Identities=16% Similarity=0.230 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID 175 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~ 175 (235)
.++|++...++++. -+.|+|++|+.+|.++++
T Consensus 16 ~~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 16 EEMARKYAINAVKA---------------DKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHH
Confidence 35667777666554 356777777666666554
No 262
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=81.52 E-value=2.1 Score=29.51 Aligned_cols=31 Identities=13% Similarity=0.280 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID 175 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~ 175 (235)
++|++...+|++. -+.|+|++|+.+|.++++
T Consensus 9 ~~Ai~lv~~Ave~---------------D~~g~y~eAl~lY~~aie 39 (83)
T 2v6y_A 9 DMARKYAILAVKA---------------DKEGKVEDAITYYKKAIE 39 (83)
T ss_dssp HHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---------------HHhccHHHHHHHHHHHHH
Confidence 4566666666554 356777776666666554
No 263
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=81.45 E-value=6 Score=27.72 Aligned_cols=56 Identities=13% Similarity=0.143 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH-------hhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLI-------DIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai-------~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
.+.|+..+.++++.| ..|+|++|+.+|..++ +..++...-......+-.++.+-++
T Consensus 12 l~~Ai~lv~~Ave~D---------------~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~ 74 (93)
T 1wfd_A 12 STAAVAVLKRAVELD---------------AESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAEN 74 (93)
T ss_dssp HHHHHHHHHHHHHHH---------------HTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---------------HhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Confidence 356777777776653 4566666555555544 4455544333344455444444433
No 264
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=80.06 E-value=15 Score=28.32 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKER 211 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~ 211 (235)
+.-...-.....+|+-|+-.+.+..++.-++-+++..+.+|.+|...|+..+|-+.+.++-+.-
T Consensus 92 e~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 92 EHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 3333334456778888888888888777667779999999999999999999999998887643
No 265
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=78.15 E-value=9.2 Score=26.06 Aligned_cols=32 Identities=16% Similarity=0.090 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID 175 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~ 175 (235)
.++|+....++++. -..|+|++|+.+|..+++
T Consensus 10 l~~A~~l~~~Av~~---------------D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 10 LTKGIELVQKAIDL---------------DTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHcCCHHHHHHHHHHHHH
Confidence 35666666666543 356777777777766665
No 266
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=78.10 E-value=3.7 Score=29.06 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLID 175 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~ 175 (235)
+-.+...+..+++.|+|++||++.+++..
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa~ 43 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKATT 43 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHHH
Confidence 34556678888999999999988777663
No 267
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=76.14 E-value=14 Score=36.53 Aligned_cols=79 Identities=8% Similarity=-0.172 Sum_probs=61.0
Q ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-h--------------------CCC--CHHHHHHHHHHHHH
Q 026642 137 EKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID-I--------------------EPN--EVEWKLLQALCYEL 193 (235)
Q Consensus 137 e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~-l--------------------~P~--~~~a~~~lA~~~~~ 193 (235)
.+.+.--|.++-.-+.+|++|+..|++++|.+++++|-. + +++ ...+|...+.++..
T Consensus 830 ~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~ 909 (950)
T 4gq2_M 830 MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFE 909 (950)
T ss_dssp HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHh
Confidence 345566677888889999999999999999999987652 1 111 12467778899999
Q ss_pred cCCHHHHHHHHHHHHHHC-CCCH
Q 026642 194 MGKLSTAKRLFKDILKER-PLLL 215 (235)
Q Consensus 194 ~g~~~~A~~~l~kaL~~~-P~~~ 215 (235)
.|-++-+++..+.+++.- +++.
T Consensus 910 ~~a~~~vi~fA~lAI~~~~~dd~ 932 (950)
T 4gq2_M 910 ESAYIDALEFSLLADASKETDDE 932 (950)
T ss_dssp TTCHHHHHHHHHHHHHTCCSCCH
T ss_pred cCCHHHHHHHHHHHHhhcccCCc
Confidence 999999999999999754 4443
No 268
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=75.27 E-value=7.1 Score=31.29 Aligned_cols=75 Identities=16% Similarity=0.022 Sum_probs=41.6
Q ss_pred hcCCHHHHHHHHHHHHHhCCCCHHHHHHH-----HHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCH--
Q 026642 125 ALMGKSEVEEMFEKLLEKEPRNVEALKVV-----MQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKL-- 197 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~~~~a~~~l-----a~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~-- 197 (235)
.+.++.+|.+.+.+|++.-|.+....... .-+.+-.|+...- +.+++ .+. ..+..+..+ ...||.
T Consensus 26 ~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP~~-~ll~~----~~~--~~y~~L~~A-vr~Gdl~~ 97 (203)
T 3t5x_A 26 FDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMPTV-ELLKK----YHL--MQFAEVTRA-VSEGNLLL 97 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEECH-HHHHH----TTC--GGGHHHHHH-HHHTCHHH
T ss_pred HHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCCCH-HHhhh----Cch--hHHHHHHHH-HHhCCHHH
Confidence 35678999999999999877665443333 3334567776542 22322 121 234555553 455664
Q ss_pred -HHHHHHHHHH
Q 026642 198 -STAKRLFKDI 207 (235)
Q Consensus 198 -~~A~~~l~ka 207 (235)
+++++..+..
T Consensus 98 f~~~l~~~~~~ 108 (203)
T 3t5x_A 98 LHEALAKHEAF 108 (203)
T ss_dssp HHHHHHHTHHH
T ss_pred HHHHHHHhHHH
Confidence 4444444433
No 269
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=71.38 E-value=36 Score=29.53 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=49.9
Q ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHH------------H----HHhhCCCCHHHHHHHHHH-HHHcCCHHHHHHHHH
Q 026642 143 EPRNVEALKVVMQGNMRRGRNKEALEFVK------------R----LIDIEPNEVEWKLLQALC-YELMGKLSTAKRLFK 205 (235)
Q Consensus 143 ~P~~~~a~~~la~~~~~~g~~~eAi~~l~------------k----ai~l~P~~~~a~~~lA~~-~~~~g~~~~A~~~l~ 205 (235)
.-.|++.+..+|..|++.+++.+|..++- - ..+-+|..++.+..+|++ |...|+...|.+.++
T Consensus 132 ~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ilg~~~s~~~~a~mL~ew~~~~~~~e~dlfiaRaVL~yL~l~n~~~A~~~~~ 211 (336)
T 3lpz_A 132 PAGDPELHHVVGTLYVEEGEFEAAEKHLVLGTKESPEVLARMEYEWYKQDESHTAPLYCARAVLPYLLVANVRAANTAYR 211 (336)
T ss_dssp TTCCHHHHHHHHHHHHHTTCHHHHHHHHTTSCTTHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHccCCHHHHHHHHHhcCCchHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 34689999999999999999999977751 0 111234567777777764 788899999988776
Q ss_pred HHHH
Q 026642 206 DILK 209 (235)
Q Consensus 206 kaL~ 209 (235)
..++
T Consensus 212 ~f~~ 215 (336)
T 3lpz_A 212 IFTS 215 (336)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 270
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=71.00 E-value=4.8 Score=29.58 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLID 175 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~ 175 (235)
.++|+..+.++++. -..|+|++|+.+|..+++
T Consensus 15 l~kAi~lv~~Ave~---------------D~ag~y~eAl~lY~~Aie 46 (117)
T 2cpt_A 15 LQKAIDLASKAAQE---------------DKAGNYEEALQLYQHAVQ 46 (117)
T ss_dssp HHHHHHHHHHHHHH---------------HHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHccCHHHHHHHHHHHHH
Confidence 45677777777643 245666666666666555
No 271
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.01 E-value=9.6 Score=37.69 Aligned_cols=53 Identities=19% Similarity=0.089 Sum_probs=43.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 152 VVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 152 ~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
.++..+...|.++-| .+++..-|.++-.-+.+|++|...|++++|..+|+++-
T Consensus 815 ~l~~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 815 ELVEKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 366677778887754 44667788888888999999999999999999998764
No 272
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=69.21 E-value=14 Score=24.81 Aligned_cols=33 Identities=6% Similarity=0.117 Sum_probs=24.0
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH
Q 026642 151 KVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEW 183 (235)
Q Consensus 151 ~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a 183 (235)
..+|..++.+|++++|+.++-+|+...|.-.+.
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~L 53 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQL 53 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHH
Confidence 446777778888888888888888877764443
No 273
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=69.21 E-value=4.6 Score=27.60 Aligned_cols=27 Identities=11% Similarity=0.129 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 150 LKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 150 ~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
...+|+-|...|+|+.|+.+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 456888999999999999999998873
No 274
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=69.10 E-value=46 Score=31.24 Aligned_cols=103 Identities=8% Similarity=-0.098 Sum_probs=63.5
Q ss_pred CHHHHHHHHHHHHHhCCCCHHHHHHHH----HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Q 026642 128 GKSEVEEMFEKLLEKEPRNVEALKVVM----QGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRL 203 (235)
Q Consensus 128 ~~~eA~~~~e~aL~~~P~~~~a~~~la----~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~ 203 (235)
+.+.|...+.+..+...-+.+.+..+- ..++..+...++..++.+......++.... .++......|+++.|...
T Consensus 229 d~~~A~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~r~Alr~~d~~~a~~~ 307 (618)
T 1qsa_A 229 DAENARLMIPSLAQAQQLNEDQIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIE-RRVRMALGTGDRRGLNTW 307 (618)
T ss_dssp CHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSCSTTCCHHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHTCHHHHHHH
T ss_pred CHHHHHHHHHhhhhccCCCHHHHHHHHHHHHHHHHHcCCChHHHHHHHhccccCCChHHHH-HHHHHHHHCCCHHHHHHH
Confidence 457788888777655444444333322 222334446788888888776554443332 333334466999999999
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 204 FKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 204 l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
++++-.......+..|-+|..+.+.++.
T Consensus 308 ~~~l~~~~~~~~r~~YW~~ra~~~~g~~ 335 (618)
T 1qsa_A 308 LARLPMEAKEKDEWRYWQADLLLERGRE 335 (618)
T ss_dssp HHHSCTTGGGSHHHHHHHHHHHHHTTCH
T ss_pred HHHccccccccHhHHHHHHHHHHHcCCH
Confidence 9877554344577777777777666553
No 275
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=68.13 E-value=34 Score=26.34 Aligned_cols=52 Identities=13% Similarity=0.186 Sum_probs=42.3
Q ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 026642 126 LMGKSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~ 177 (235)
.+..|+-.+.+...+..++-+++.+..+|.+|-+.|+..+|-+.+.+|.+..
T Consensus 104 ~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 104 QGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp TTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 4446666777777777777789999999999999999999999999998754
No 276
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=67.86 E-value=16 Score=33.10 Aligned_cols=31 Identities=10% Similarity=-0.054 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKER 211 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~ 211 (235)
.-++..+|++|..+|+|++|++..++++...
T Consensus 203 ~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 203 EVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 3466778888888888888888888887654
No 277
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=67.44 E-value=27 Score=23.93 Aligned_cols=18 Identities=28% Similarity=0.202 Sum_probs=12.5
Q ss_pred HHcCCHHHHHHHHHHHHh
Q 026642 158 MRRGRNKEALEFVKRLID 175 (235)
Q Consensus 158 ~~~g~~~eAi~~l~kai~ 175 (235)
-..|+|++|+.+|..+++
T Consensus 27 D~~g~y~eAl~lY~~Aie 44 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGID 44 (86)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 456777777777776665
No 278
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=66.99 E-value=20 Score=24.43 Aligned_cols=59 Identities=5% Similarity=-0.010 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHhhch
Q 026642 163 NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL--LRALHDLGRYVSMTL 229 (235)
Q Consensus 163 ~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~--~~a~~~l~~~~~~~~ 229 (235)
.+.|++.+.+|++.|-. ..+.-|..+ |.+|++.|..+++..|+. -..+......|..+-
T Consensus 16 ~~~Ai~lv~~Ave~D~~---g~y~eAl~l-----Y~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~RA 76 (83)
T 2w2u_A 16 EEMARKYAINAVKADKE---GNAEEAITN-----YKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRRI 76 (83)
T ss_dssp HHHHHHHHHHHHHHHHT---TCHHHHHHH-----HHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh---ccHHHHHHH-----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 45677777777766421 111122222 345666666666666655 455666666665543
No 279
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=66.28 E-value=11 Score=26.61 Aligned_cols=28 Identities=14% Similarity=-0.027 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
+-.+-.+|..+...|+||+|+++.+++.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4456678999999999999988877765
No 280
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=66.05 E-value=28 Score=25.19 Aligned_cols=72 Identities=18% Similarity=0.176 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
+||..+. ..|+..++.--+-.-....++.+|+|++|....+..- .++.--.+|.+-...|--+++...+.++
T Consensus 24 qEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL~~l 95 (116)
T 2p58_C 24 EEANCIA-EWLHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA-----YPDLEPWLALCEYRLGLGSALESRLNRL 95 (116)
T ss_dssp HHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC-----CGGGHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3444333 3455566622334444667899999999998876643 4556666788889999999888877443
No 281
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=65.52 E-value=15 Score=31.66 Aligned_cols=66 Identities=12% Similarity=0.018 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHH----------------Hhh---CCCCHHHHHHHHH-HHHHcCCHHHHHHHH
Q 026642 145 RNVEALKVVMQGNMRRGRNKEALEFVKRL----------------IDI---EPNEVEWKLLQAL-CYELMGKLSTAKRLF 204 (235)
Q Consensus 145 ~~~~a~~~la~~~~~~g~~~eAi~~l~ka----------------i~l---~P~~~~a~~~lA~-~~~~~g~~~~A~~~l 204 (235)
.+++.+..+|..|.+.|++.+|..+|-.. .+. +|...+.+..+|+ .|...|+...|.+.+
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~~w~~~~~~~~~~e~dlf~~RaVL~yL~l~n~~~A~~~~ 211 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLWDWLCQVDDIEDSTVAEFFSRLVFNYLFISNISFAHESK 211 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 68999999999999999999999876311 111 2334556666665 467889999999998
Q ss_pred HHHHHH
Q 026642 205 KDILKE 210 (235)
Q Consensus 205 ~kaL~~ 210 (235)
+...+.
T Consensus 212 ~~f~~~ 217 (312)
T 2wpv_A 212 DIFLER 217 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 282
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=64.86 E-value=14 Score=33.05 Aligned_cols=30 Identities=20% Similarity=0.145 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
.-++..+|++|..+|+|++|++..++++..
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 456777888888888888888888888763
No 283
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=63.27 E-value=50 Score=25.51 Aligned_cols=59 Identities=12% Similarity=-0.065 Sum_probs=42.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCC------HHHHHH-H--HHHHHHcCCHHHHHHHHHHHHH
Q 026642 151 KVVMQGNMRRGRNKEALEFVKRLIDIEPNE------VEWKLL-Q--ALCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 151 ~~la~~~~~~g~~~eAi~~l~kai~l~P~~------~~a~~~-l--A~~~~~~g~~~~A~~~l~kaL~ 209 (235)
..-+..++..|+|=+|=+.++.+-...+.. ....+. + |..+...|+...|...+++++.
T Consensus 36 ~~~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 36 VVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 335566777799999999999988876554 233334 3 3345667999999999999877
No 284
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=62.89 E-value=21 Score=23.92 Aligned_cols=34 Identities=6% Similarity=-0.073 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHH
Q 026642 185 LLQALCYELMGKLSTAKRLFKDILKERPLLLRAL 218 (235)
Q Consensus 185 ~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~ 218 (235)
..+|..+...|++++|..+|-+|+...|+-...+
T Consensus 21 V~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL 54 (73)
T 3ax2_A 21 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLL 54 (73)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHH
Confidence 3589999999999999999999999999864433
No 285
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=62.79 E-value=19 Score=32.24 Aligned_cols=30 Identities=17% Similarity=0.146 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
.-++..+|++|..+|+|++|++..++++..
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 457778899999999999999999999864
No 286
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=62.72 E-value=31 Score=23.37 Aligned_cols=58 Identities=14% Similarity=0.136 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHhhch
Q 026642 164 KEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL--LRALHDLGRYVSMTL 229 (235)
Q Consensus 164 ~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~--~~a~~~l~~~~~~~~ 229 (235)
+.|++.+.+|++.|-. ..+.-|..+ |.+|++.|.++++..|+. -..+......|..+-
T Consensus 9 ~~Ai~lv~~Ave~D~~---g~y~eAl~l-----Y~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RA 68 (83)
T 2v6y_A 9 DMARKYAILAVKADKE---GKVEDAITY-----YKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRI 68 (83)
T ss_dssp HHHHHHHHHHHHHHHT---TCHHHHHHH-----HHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh---ccHHHHHHH-----HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 4778888888776421 111122222 445666666777777665 455666555555443
No 287
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=62.54 E-value=59 Score=26.10 Aligned_cols=85 Identities=11% Similarity=-0.124 Sum_probs=60.1
Q ss_pred HHHHHHHHh------CCCCHH---HHHHHHHHHHHcCCHHHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHH
Q 026642 134 EMFEKLLEK------EPRNVE---ALKVVMQGNMRRGRNKEALEFVKRLIDIEP--NEVEWKLLQALCYELMGKLSTAKR 202 (235)
Q Consensus 134 ~~~e~aL~~------~P~~~~---a~~~la~~~~~~g~~~eAi~~l~kai~l~P--~~~~a~~~lA~~~~~~g~~~~A~~ 202 (235)
..+++++.. .-+|+. .|..++... ..+...++.+.|..+....- ..+..|...|..+...|++.+|.+
T Consensus 58 ~lLErc~~~F~~~~rYkND~RYLklWl~Ya~~~-~~~~~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~ 136 (202)
T 3esl_A 58 STMERCLIYIQDMETYRNDPRFLKIWIWYINLF-LSNNFHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKV 136 (202)
T ss_dssp HHHHHHHHHHTTCGGGTTCHHHHHHHHHHHHHH-STTCHHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHhcccccccCCHHHHHHHHHHHHhh-cccccCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 456666653 334443 344444333 14457799999999887654 457888899999999999999999
Q ss_pred HHHHHHHHCCCCHHHHH
Q 026642 203 LFKDILKERPLLLRALH 219 (235)
Q Consensus 203 ~l~kaL~~~P~~~~a~~ 219 (235)
.|+..++..-.-..-+.
T Consensus 137 Vy~~GI~~~A~P~~rL~ 153 (202)
T 3esl_A 137 LLELGAENNCRPYNRLL 153 (202)
T ss_dssp HHHHHHHTTCBSHHHHH
T ss_pred HHHHHHHcCCccHHHHH
Confidence 99999998866544443
No 288
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=66.03 E-value=1.6 Score=41.63 Aligned_cols=52 Identities=21% Similarity=0.309 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHH
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLST 199 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~ 199 (235)
+.....++..+..|+|.-|.+.++.++..+|++.+++..+|.+|.++|.-.+
T Consensus 462 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~ 513 (668)
T 2yhe_A 462 DAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTE 513 (668)
Confidence 3445556667788999999999999999999999999999999998886544
No 289
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=61.76 E-value=14 Score=37.09 Aligned_cols=54 Identities=19% Similarity=0.139 Sum_probs=42.4
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 150 LKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 150 ~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
...+...+...|.++-|.+ .+...+.++...+.+|+++...|++++|.++|+++
T Consensus 815 ~~~l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~ka 868 (1139)
T 4fhn_B 815 VTELVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 868 (1139)
T ss_dssp HHHHHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 3445556667777766544 45567888888899999999999999999999886
No 290
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=60.02 E-value=43 Score=31.63 Aligned_cols=53 Identities=13% Similarity=-0.088 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 180 EVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 180 ~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
..+.....|+..+..|+|.-|.+..+.++..+|+|..+..-++.+|.+.+...
T Consensus 448 g~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 448 GAERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 35666778888999999999999999999999999999998998888876544
No 291
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=58.37 E-value=28 Score=25.11 Aligned_cols=72 Identities=21% Similarity=0.178 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
+||..+. ..|+..++.--+-.-....++.+|+|++|....+..- .++.--.+|.+-...|--+++...+.++
T Consensus 23 qEA~tIA-dwL~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c-----~pdlepw~ALce~rlGl~s~le~rL~~l 94 (115)
T 2uwj_G 23 EEALCIA-EWLERLGQDEAARLIRISSLANQGRYQEALAFAHGNP-----WPALEPWFALCEWHLGLGAALDRRLAGL 94 (115)
T ss_dssp HHHHHHH-HHHHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTCC-----CGGGHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC-----CchHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3443333 3455566622334444567899999999988766542 4666666788899999999998888444
No 292
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=56.50 E-value=21 Score=32.06 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKER 211 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~ 211 (235)
.-++..+|++|..+|+|++|++..++++...
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 4577889999999999999999999999764
No 293
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=54.19 E-value=83 Score=27.48 Aligned_cols=64 Identities=5% Similarity=-0.032 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCC---CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDI-----EPN---EVEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l-----~P~---~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
......+++.|+..|+.++|...++++-.. +.+ ....+...+..|...++|+++....-..+..
T Consensus 127 l~i~~~i~~~yl~~~d~~~a~~~l~~~~~~l~~~~~~~~~v~~~~y~~~~~~~~~~~~~a~~y~~~l~~l~~ 198 (393)
T 4b4t_O 127 LLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLST 198 (393)
T ss_dssp HHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhhccCCccHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhh
Confidence 345667788999999999999999888642 122 2344555677888889999888887777753
No 294
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=52.41 E-value=39 Score=30.53 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=28.4
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~ 177 (235)
...|+..+|++|+-.|+|++|+++.+++|...
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~~ 233 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAKD 233 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcC
Confidence 35688999999999999999999999999753
No 295
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=51.82 E-value=65 Score=26.36 Aligned_cols=63 Identities=8% Similarity=-0.016 Sum_probs=44.4
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC---------HHHHHHHHHHHHHHCCCC
Q 026642 152 VVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK---------LSTAKRLFKDILKERPLL 214 (235)
Q Consensus 152 ~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~---------~~~A~~~l~kaL~~~P~~ 214 (235)
....+.++.|.|++|.+.+++.+.-++.+-.....|..+-....- |+.-++.....++..-+.
T Consensus 119 qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~~H~~lqnFSy~~~~~ki~~fve~~~~~ 190 (235)
T 3bu8_A 119 AAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLAHPVIQNFSYETFQQKMLRFLESHLDD 190 (235)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCTTSHHHHTCCHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCcccHHHHhccHHHHHHHHHHHHHHHhcc
Confidence 345567899999999999999999877777777777777655554 444555555555544433
No 296
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=51.75 E-value=25 Score=31.53 Aligned_cols=32 Identities=22% Similarity=0.090 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Q 026642 180 EVEWKLLQALCYELMGKLSTAKRLFKDILKER 211 (235)
Q Consensus 180 ~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~ 211 (235)
..-++..+|++|..+|+|++|++..++++...
T Consensus 190 k~aA~aLlARvyL~~~~~~~A~~~a~~vi~~~ 221 (460)
T 3snx_A 190 TDVVNGLMARAYLLTGQWGEAAKAAEAARKGY 221 (460)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 34577788999999999999999998888653
No 297
>3bu8_A Telomeric repeat-binding factor 2; TRF2 TRFH domain TRF2 dimerization domain TIN2 peptide, alternative splicing, cell cycle, chromosomal protein; 2.15A {Homo sapiens} SCOP: a.146.1.1 PDB: 3bua_A* 1h6p_A
Probab=50.90 E-value=54 Score=26.82 Aligned_cols=69 Identities=9% Similarity=0.010 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHhhCCCCHHH------H--HHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhh
Q 026642 163 NKEALEFVKRLIDIEPNEVEW------K--LLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQI 231 (235)
Q Consensus 163 ~~eAi~~l~kai~l~P~~~~a------~--~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~ 231 (235)
.+.|+-.++.+-+-.+-.... . ...-.+....|+|++|.+.+++....++.+-..-..|..+-.++...
T Consensus 88 LESAl~v~~~I~~e~~l~~~l~e~i~~llk~qAV~VCiek~~f~kA~eiLkr~~~~~~s~~kLr~kL~~II~~Kd~~ 164 (235)
T 3bu8_A 88 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSKDPTTQKLRNDLLNIIREKNLA 164 (235)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHSTTCGGGHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcCCCCchHHHHHHHHHHhccCcc
Confidence 467888888877666432111 1 11234567899999999999999998877777777777776665543
No 298
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=50.51 E-value=33 Score=30.77 Aligned_cols=30 Identities=13% Similarity=0.040 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
.-++..+|++|..+|+|++|++..++++..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 346778999999999999999999999875
No 299
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=50.33 E-value=1e+02 Score=25.08 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHH
Q 026642 164 KEALEFVKRLIDIEP--NEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALH 219 (235)
Q Consensus 164 ~eAi~~l~kai~l~P--~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~ 219 (235)
+++.+.|..+....- ..+..|...|..+...|++.+|.+.|+..++..-.-..-+.
T Consensus 131 ~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~ 188 (223)
T 4aez_C 131 DEPVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQ 188 (223)
T ss_dssp SCHHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCBSHHHHH
T ss_pred CCHHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHH
Confidence 577788888877554 45788888999999999999999999999998876644443
No 300
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=49.78 E-value=37 Score=30.25 Aligned_cols=47 Identities=15% Similarity=0.173 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 130 SEVEEMFEKLLEKE--------PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 130 ~eA~~~~e~aL~~~--------P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
+..++.++.++..= .+-..|+..++++|+-.|+|++|+++.+++|..
T Consensus 165 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~ 219 (454)
T 3myv_A 165 DFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIKD 219 (454)
T ss_dssp HHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHhC
Confidence 44455555555432 334568899999999999999999999999963
No 301
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=47.80 E-value=20 Score=25.35 Aligned_cols=27 Identities=4% Similarity=-0.112 Sum_probs=15.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHCCC
Q 026642 187 QALCYELMGKLSTAKRLFKDILKERPL 213 (235)
Q Consensus 187 lA~~~~~~g~~~~A~~~l~kaL~~~P~ 213 (235)
+|..+...|+++.|+.+|-+|+...|+
T Consensus 26 lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 26 LGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 455555555555555555555555554
No 302
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.73 E-value=24 Score=32.57 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=40.4
Q ss_pred cCCHHHHHHHHHHHHHhCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 026642 126 LMGKSEVEEMFEKLLEKEPRN-------VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180 (235)
Q Consensus 126 ~~~~~eA~~~~e~aL~~~P~~-------~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~ 180 (235)
...+++|.....+.. .|.+ +..++.+|+++..+++|.+|.+++..|++..|.+
T Consensus 244 ~~~y~qA~~lvsk~~--fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 244 NGEVDSASDFISKLE--YPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp SSCSTTHHHHHHHHC--SCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred cCcHHHHHHHHhcCc--CCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 344677777777663 3322 4567778999999999999999999999987754
No 303
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=47.34 E-value=48 Score=29.52 Aligned_cols=32 Identities=19% Similarity=0.255 Sum_probs=28.2
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 145 ~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
+-..|+..+|++|+-.|+|++|+++.+++|..
T Consensus 194 tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 194 NRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 44578899999999999999999999999863
No 304
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=46.66 E-value=20 Score=24.37 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=22.9
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 184 KLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 184 ~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
...+|+=|...|+|+.|..+|+.+++.
T Consensus 15 ~~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 15 NVKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 346788899999999999999988764
No 305
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=46.30 E-value=26 Score=24.77 Aligned_cols=31 Identities=6% Similarity=0.114 Sum_probs=26.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 026642 151 KVVMQGNMRRGRNKEALEFVKRLIDIEPNEV 181 (235)
Q Consensus 151 ~~la~~~~~~g~~~eAi~~l~kai~l~P~~~ 181 (235)
..+|..++.+|+++.|+.++-+|+...|.-.
T Consensus 24 V~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~ 54 (95)
T 1om2_A 24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQPQ 54 (95)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHcCCHH
Confidence 4578888999999999999999999887633
No 306
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.25 E-value=15 Score=26.98 Aligned_cols=58 Identities=17% Similarity=0.212 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH------HHcCCHHHHHH
Q 026642 129 KSEVEEMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCY------ELMGKLSTAKR 202 (235)
Q Consensus 129 ~~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~------~~~g~~~~A~~ 202 (235)
+++|.+...++|+.|. .|+-++|+++|.+.|.. +..|..- ..-..|++|.+
T Consensus 19 h~~AF~~Is~AL~~DE---------------~g~k~~Al~lYk~GI~e--------Le~Gl~I~~~~~~~~g~~we~Ar~ 75 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDE---------------LGQKEEAKNYYKQGIGH--------LLRGISISSKESEHTGPGWESARQ 75 (116)
T ss_dssp HHHHHHHHHHHHHHHH---------------HTCHHHHHHHHHHHHHH--------HHHHHSSCCCCTTCCCSHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh---------------cCCHHHHHHHHHHHHHH--------HHHhccccccCCCCCChhHHHHHH
Confidence 5777777777777653 38888998888777652 1222211 11234777777
Q ss_pred HHHHHHH
Q 026642 203 LFKDILK 209 (235)
Q Consensus 203 ~l~kaL~ 209 (235)
.-+|..+
T Consensus 76 lq~KM~~ 82 (116)
T 2dl1_A 76 MQQKMKE 82 (116)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666643
No 307
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=43.41 E-value=43 Score=22.85 Aligned_cols=37 Identities=11% Similarity=-0.008 Sum_probs=18.4
Q ss_pred HHcCCHHHHHHHHHH-------HHHHCCCCH--HHHHHHHHHHhhc
Q 026642 192 ELMGKLSTAKRLFKD-------ILKERPLLL--RALHDLGRYVSMT 228 (235)
Q Consensus 192 ~~~g~~~~A~~~l~k-------aL~~~P~~~--~a~~~l~~~~~~~ 228 (235)
-..|+|++|+.+|.. +++.+|+.. ..+......|..+
T Consensus 27 D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~R 72 (86)
T 4a5x_A 27 DSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDR 72 (86)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHH
Confidence 455555555555555 455555542 3444444444443
No 308
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=43.08 E-value=21 Score=32.24 Aligned_cols=28 Identities=7% Similarity=-0.012 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026642 182 EWKLLQALCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 182 ~a~~~lA~~~~~~g~~~~A~~~l~kaL~ 209 (235)
-++..+|++|..+|+|++|++..++++.
T Consensus 181 aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 181 AAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 4677889999999999999999888874
No 309
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=42.71 E-value=48 Score=30.02 Aligned_cols=30 Identities=7% Similarity=-0.096 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
.-++.++|++|..+++|++|++..++++..
T Consensus 182 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 182 GAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 357778999999999999999999999864
No 310
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=41.45 E-value=1.1e+02 Score=25.20 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE-VEWKLLQALCYE 192 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~-~~a~~~lA~~~~ 192 (235)
+-+-+..++.+.-+.++|++.+++.+++++.+++- .+=++++..+|-
T Consensus 7 ~re~~v~~AklaeqaeRyddM~~~mk~v~~~~~eLs~EERnLLSvaYK 54 (236)
T 3iqu_A 7 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYK 54 (236)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence 34566777888888999999999999999887763 555666666553
No 311
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=41.13 E-value=1.1e+02 Score=30.53 Aligned_cols=74 Identities=22% Similarity=0.203 Sum_probs=35.4
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH----HHHHHHHHcCCHHHHHHHHHHHHHHCCCC---HHHHHHHHH
Q 026642 151 KVVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKL----LQALCYELMGKLSTAKRLFKDILKERPLL---LRALHDLGR 223 (235)
Q Consensus 151 ~~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~----~lA~~~~~~g~~~~A~~~l~kaL~~~P~~---~~a~~~l~~ 223 (235)
..+|...+..|+.+.+...++.+... +++..++ .+|.+|...|+...-.+.+..+. .++++ -.+..++|+
T Consensus 528 aalgLGll~~g~~e~~~~li~~L~~~--~dp~vRygaa~alglAyaGTGn~~aIq~LL~~~~-~d~~d~VRraAViaLGl 604 (963)
T 4ady_A 528 LAVGLALINYGRQELADDLITKMLAS--DESLLRYGGAFTIALAYAGTGNNSAVKRLLHVAV-SDSNDDVRRAAVIALGF 604 (963)
T ss_dssp HHHHHHHHTTTCGGGGHHHHHHHHHC--SCHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHH-HCSCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhCCChHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhc-cCCcHHHHHHHHHHHHh
Confidence 33444444566666555555554432 2333322 35556667777543333444443 44443 234455555
Q ss_pred HHhh
Q 026642 224 YVSM 227 (235)
Q Consensus 224 ~~~~ 227 (235)
+..+
T Consensus 605 I~~g 608 (963)
T 4ady_A 605 VLLR 608 (963)
T ss_dssp HTSS
T ss_pred hccC
Confidence 4433
No 312
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=40.60 E-value=26 Score=25.71 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhhCC
Q 026642 163 NKEALEFVKRLIDIEP 178 (235)
Q Consensus 163 ~~eAi~~l~kai~l~P 178 (235)
+++|..++.++|.+|.
T Consensus 19 h~~AF~~Is~AL~~DE 34 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDE 34 (116)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhh
Confidence 4556666666666553
No 313
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=39.66 E-value=1.2e+02 Score=24.31 Aligned_cols=51 Identities=12% Similarity=-0.070 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 026642 129 KSEVEEMFEKLLEK--EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN 179 (235)
Q Consensus 129 ~~eA~~~~e~aL~~--~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~ 179 (235)
..++.+.|...... .-..+..|...|..+...|++++|.+.|++.|+.+-.
T Consensus 95 ~~~p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~~A~ 147 (202)
T 3esl_A 95 FHESENTFKYMFNKGIGTKLSLFYEEFSKLLENAQFFLEAKVLLELGAENNCR 147 (202)
T ss_dssp HHHHHHHHHHHHHHTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred cCCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 44677777776654 4677888999999999999999999999999997643
No 314
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=39.66 E-value=42 Score=23.24 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Q 026642 163 NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 163 ~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
.+.|+..+.+|++.|-. -.+.-|..+ |..|++.|..+++.+++.
T Consensus 12 l~~Ai~lv~~Ave~D~~---g~y~eAl~~-----Y~~Aie~l~~alk~e~~~ 55 (93)
T 1wfd_A 12 STAAVAVLKRAVELDAE---SRYQQALVC-----YQEGIDMLLQVLKGTKES 55 (93)
T ss_dssp HHHHHHHHHHHHHHHHT---TCHHHHHHH-----HHHHHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHHHHHh---CCHHHHHHH-----HHHHHHHHHHHHHHCCCH
Confidence 45777777777766422 111112222 445666666667666665
No 315
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=39.37 E-value=1.1e+02 Score=25.60 Aligned_cols=46 Identities=22% Similarity=0.240 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHH
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE-VEWKLLQALCY 191 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~-~~a~~~lA~~~ 191 (235)
+-+-+..++.+.-+.++|++.+++.+++++.+++- .+=++++.++|
T Consensus 30 ~re~lv~~AKLaeqaeRYddMv~~MK~v~~~~~eLt~EERNLLSvAY 76 (261)
T 3ubw_A 30 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAY 76 (261)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCCcCCHHHHHHHHHHH
Confidence 34556667777777788888888888777776652 44455555444
No 316
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=39.17 E-value=55 Score=21.98 Aligned_cols=50 Identities=14% Similarity=0.049 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHH-------HHHHHHCCCC--HHHHHHHHHHHhh
Q 026642 163 NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLF-------KDILKERPLL--LRALHDLGRYVSM 227 (235)
Q Consensus 163 ~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l-------~kaL~~~P~~--~~a~~~l~~~~~~ 227 (235)
.+.|+..+.++++. -..|+|++|+.+| ..+++..++. -..+......|..
T Consensus 10 l~~A~~l~~~Av~~---------------D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~ 68 (85)
T 2v6x_A 10 LTKGIELVQKAIDL---------------DTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLN 68 (85)
T ss_dssp HHHHHHHHHHHHHH---------------HHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 34666666666544 3445555555544 4455556554 2334444444443
No 317
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=38.70 E-value=1.6e+02 Score=23.99 Aligned_cols=74 Identities=7% Similarity=0.006 Sum_probs=48.8
Q ss_pred HcCCHHHHHHHHHHHHhh-----CCCC---HHHHHHHHHHHH-HcCCHHHHHHHHHHHHHH------CCCCHHHHHHHHH
Q 026642 159 RRGRNKEALEFVKRLIDI-----EPNE---VEWKLLQALCYE-LMGKLSTAKRLFKDILKE------RPLLLRALHDLGR 223 (235)
Q Consensus 159 ~~g~~~eAi~~l~kai~l-----~P~~---~~a~~~lA~~~~-~~g~~~~A~~~l~kaL~~------~P~~~~a~~~l~~ 223 (235)
..|+-+.|.++|+.|.++ .|.+ ....++.++.|+ -+++.++|....++++.. +..+..-.....+
T Consensus 137 ~~g~~e~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd~~~~~~~~~E~m~~~~~~~~ 216 (227)
T 2o8p_A 137 GLCSLEDSKKIHQDAFTLLCEHPDKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGKILELQIKEQENMDRKAQITV 216 (227)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHCGGGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHhhccccchhHHHHHH
Confidence 367788999999998863 3443 355566666544 568999999998888553 4556555666666
Q ss_pred HHhhchhhc
Q 026642 224 YVSMTLQIQ 232 (235)
Q Consensus 224 ~~~~~~~~~ 232 (235)
+++...|..
T Consensus 217 ~~q~~~d~~ 225 (227)
T 2o8p_A 217 YLQGIKDYI 225 (227)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHhc
Confidence 666655543
No 318
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=38.65 E-value=1e+02 Score=25.20 Aligned_cols=45 Identities=22% Similarity=0.248 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN-EVEWKLLQALCY 191 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~-~~~a~~~lA~~~ 191 (235)
-+-+..++.+..+.++|++.+++.+++++.+++ ..+=+.++..+|
T Consensus 5 re~~v~~AklaeqaeRyddm~~~mk~v~~~~~eLt~EERnLLsvay 50 (234)
T 2br9_A 5 REDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAY 50 (234)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Confidence 345556777777788888888888888877664 244555555554
No 319
>4b4t_O 26S proteasome regulatory subunit RPN9; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=38.62 E-value=75 Score=27.77 Aligned_cols=56 Identities=20% Similarity=0.153 Sum_probs=41.3
Q ss_pred HHHHHHcCCHHHHHHHHHHHHhhC-----------------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026642 154 MQGNMRRGRNKEALEFVKRLIDIE-----------------PNEVEWKLLQALCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 154 a~~~~~~g~~~eAi~~l~kai~l~-----------------P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~ 209 (235)
..+.....+.++|++.++++.+.- -.........+..|...|+.++|...++++-.
T Consensus 83 ~~~~~~~~d~~~al~~L~~~~~~~~~~~~~~~~~~~~~~~~ea~l~i~~~i~~~yl~~~d~~~a~~~l~~~~~ 155 (393)
T 4b4t_O 83 LASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEK 155 (393)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTTTSHHHHSSCCCCCCSSSSCCSHHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHhhcCCHHHHHHHHHHHHHHHhhhhhhhhcccchhhhhhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 445566788999999998774321 01234566778899999999999999988854
No 320
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=37.92 E-value=1.2e+02 Score=25.13 Aligned_cols=46 Identities=15% Similarity=0.126 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHH
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE-VEWKLLQALCYE 192 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~-~~a~~~lA~~~~ 192 (235)
-+-+..++.+.-+.++|++.+++.+++++.+++- .+=++++.++|-
T Consensus 4 re~lv~~AklaeqaeRyddM~~~Mk~v~~~~~eLt~EERnLLSvAYK 50 (248)
T 3uzd_A 4 REQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYK 50 (248)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHH
Confidence 3456677888888899999999999998887753 555556655553
No 321
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=37.60 E-value=1e+02 Score=23.66 Aligned_cols=51 Identities=12% Similarity=0.059 Sum_probs=39.3
Q ss_pred hcCCHHHHHHHHHHHHHhCCCC---HHHHHHHHH------HHHHcCCHHHHHHHHHHHHh
Q 026642 125 ALMGKSEVEEMFEKLLEKEPRN---VEALKVVMQ------GNMRRGRNKEALEFVKRLID 175 (235)
Q Consensus 125 ~~~~~~eA~~~~e~aL~~~P~~---~~a~~~la~------~~~~~g~~~eAi~~l~kai~ 175 (235)
..+.+-+|-+.+|.+....+.. -+.|..|.+ .+.+.|+...|...+.+++.
T Consensus 44 n~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 44 NSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred hCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3467899999999999886554 345555555 45678999999999999987
No 322
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=37.42 E-value=56 Score=29.52 Aligned_cols=34 Identities=6% Similarity=-0.081 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCC
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDI-EPNE 180 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l-~P~~ 180 (235)
+..++.+|++++.+++|.+|.+++..|++. .|..
T Consensus 220 v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 220 IEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred EeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 467888999999999999999999999998 7654
No 323
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=36.70 E-value=64 Score=28.80 Aligned_cols=48 Identities=13% Similarity=0.087 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhC--------CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 026642 130 SEVEEMFEKLLEKE--------PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177 (235)
Q Consensus 130 ~eA~~~~e~aL~~~--------P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~ 177 (235)
+..++.++.++..= .+-..|+..++++|+-.|+|++|+++.+++|...
T Consensus 177 ~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 177 EQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 44455555555432 2345688999999999999999999999999753
No 324
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=36.60 E-value=1.7e+02 Score=26.54 Aligned_cols=92 Identities=13% Similarity=0.010 Sum_probs=54.3
Q ss_pred HHHHHHHHHHhCCC------CHHH---HHHHHHHHHHcCC---HHHHHHHHHHHHhhCCC--------------------
Q 026642 132 VEEMFEKLLEKEPR------NVEA---LKVVMQGNMRRGR---NKEALEFVKRLIDIEPN-------------------- 179 (235)
Q Consensus 132 A~~~~e~aL~~~P~------~~~a---~~~la~~~~~~g~---~~eAi~~l~kai~l~P~-------------------- 179 (235)
..+..--+-.+||. +.+. ...|-++++..|. |.-|+-.+-.+-+++|.
T Consensus 233 ~MeVAa~VsaiNPsi~~~tds~el~~LQq~LLWlLyd~GhL~rYPmALgnLgDLEe~~pt~gr~~~~~L~~~AI~sa~~~ 312 (550)
T 3u84_A 233 KMEVAFMVCAINPSIDLHTDSLELLQLQQKLLWLLYDLGHLERYPMALGNLADLEELEPTPGRPDPLTLYHKGIASAKTY 312 (550)
T ss_dssp HHHHHHHHHTCCCBSSSSCBCHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHSCCTTCCCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHhcCCcccccccHHHHHHHHHHHHHHHHhccchhhCchhhcchhhHhhcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 33443344455664 3333 3566666666553 44455554444444443
Q ss_pred ----CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH---HC---CCCHHHHHHHHH
Q 026642 180 ----EVEWKLLQALCYELMGKLSTAKRLFKDILK---ER---PLLLRALHDLGR 223 (235)
Q Consensus 180 ----~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~---~~---P~~~~a~~~l~~ 223 (235)
...-|..+|-.|+..+++.+|+..+..+-. .+ -+|.+.|.++..
T Consensus 313 Y~n~HvYPYtYlgGy~yR~~~~reAl~~WA~Aa~Vi~~YNY~reDeEIYKEf~e 366 (550)
T 3u84_A 313 YRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFE 366 (550)
T ss_dssp STTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCGGGHHHHHHHHH
T ss_pred hccCCccceeecchhhhhcchHHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 456667788899999999999999977644 22 233566655443
No 325
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=36.53 E-value=69 Score=29.15 Aligned_cols=30 Identities=13% Similarity=0.110 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKE 210 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~ 210 (235)
.-++..+|++|...++|++|++..++++..
T Consensus 198 ~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 198 QAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 357788999999999999999999999874
No 326
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=36.40 E-value=1.8e+02 Score=25.88 Aligned_cols=44 Identities=18% Similarity=0.006 Sum_probs=31.3
Q ss_pred HHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 026642 166 ALEFVKRLIDI-----EPNEVEWKLLQALCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 166 Ai~~l~kai~l-----~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~ 209 (235)
++..|.++|.. +-....-|..+|-.++..+++.+|++.+..+-.
T Consensus 276 ~l~L~~~AI~sa~~yY~n~HvYPYtylgGy~yR~~~~reAl~~WA~Aa~ 324 (472)
T 3re2_A 276 AEELFKEAITVAKREYSDHHIYPYTYLGGYYYRKKKYYEAIASWVDAGY 324 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCccchhhhhhhhhhcchHHHHHHHHHHHHH
Confidence 45555555542 122456677788899999999999999977644
No 327
>3ph0_C ASCG; type III secretion system, chapero; 2.40A {Aeromonas hydrophila}
Probab=36.38 E-value=83 Score=20.05 Aligned_cols=39 Identities=18% Similarity=0.114 Sum_probs=17.9
Q ss_pred CHHHHHHHHHHHHhhCCCCHH-HHHHHHHHHHHcCCHHHHH
Q 026642 162 RNKEALEFVKRLIDIEPNEVE-WKLLQALCYELMGKLSTAK 201 (235)
Q Consensus 162 ~~~eAi~~l~kai~l~P~~~~-a~~~lA~~~~~~g~~~~A~ 201 (235)
..+||....+- ++..++..+ +-..+...+.+.|+|++|.
T Consensus 21 cH~EA~tIA~~-L~~~~~~eE~v~mIr~~SLmNrG~Yq~Al 60 (61)
T 3ph0_C 21 CHQEAASIADW-LAQEECMAECVTLIRLSSLMNQGDYQRAL 60 (61)
T ss_dssp CHHHHHHHHHH-HHTSSTTHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHccchHhHhh
Confidence 45666554443 444455433 4445667778888888774
No 328
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=36.08 E-value=55 Score=23.74 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHH-------HHHHHHHHHHHHCCCCH---HHHHHHHHHHhh
Q 026642 163 NKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLS-------TAKRLFKDILKERPLLL---RALHDLGRYVSM 227 (235)
Q Consensus 163 ~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~-------~A~~~l~kaL~~~P~~~---~a~~~l~~~~~~ 227 (235)
.+.|+..+.+|++. -..|+|+ .|+++|..+++..+.+. ..+......|..
T Consensus 15 l~kAi~lv~~Ave~---------------D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~ 74 (117)
T 2cpt_A 15 LQKAIDLASKAAQE---------------DKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLD 74 (117)
T ss_dssp HHHHHHHHHHHHHH---------------HHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------HHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHH
Confidence 45677777777654 3334444 45555555565664442 344444444443
No 329
>3hdx_A SUSD homolog, SUSD superfamily protein; NP_809182.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.24 E-value=81 Score=28.13 Aligned_cols=30 Identities=23% Similarity=0.236 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 147 VEALKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 147 ~~a~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
..|+..++++|+-.|+|++|+++.+++|..
T Consensus 197 ~aA~allarvyL~~~~~~~A~~~a~~vi~~ 226 (478)
T 3hdx_A 197 LSAYSVLAHICAWQGNYAEAETYSAFIIDH 226 (478)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHhC
Confidence 468899999999999999999999999964
No 330
>3fap_B FRAP, FKBP12-rapamycin associated protein; complex, gene therapy, cell cycle; HET: ARD; 1.85A {Homo sapiens} SCOP: a.24.7.1 PDB: 2fap_B* 2rse_B 1nsg_B* 4fap_B* 1aue_A 2gaq_A 1fap_B*
Probab=35.10 E-value=69 Score=22.38 Aligned_cols=74 Identities=12% Similarity=0.069 Sum_probs=39.8
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh---CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHH
Q 026642 150 LKVVMQGNMRRGRNKEALEFVKRLIDI---EPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL--LRALHDLGRY 224 (235)
Q Consensus 150 ~~~la~~~~~~g~~~eAi~~l~kai~l---~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~--~~a~~~l~~~ 224 (235)
+.....+|+..++.+..++.++.+.+. .|+.. ...+-+.....+..+|.+.+++.....-.. -.+|.-...+
T Consensus 13 LeeAsr~~f~~~n~~~m~~~L~pLh~~l~~~peT~---~E~sF~~~fG~~L~~A~~~~~~y~~t~~~~~l~qAWdiY~~V 89 (94)
T 3fap_B 13 LEEASRLYFGERNVKGMFEVLEPLHAMMERGPQTL---KETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHV 89 (94)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCCCSH---HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHHHHHHH
Confidence 334456677777888777777666554 45532 222222233345667777777776553221 3444444444
Q ss_pred Hh
Q 026642 225 VS 226 (235)
Q Consensus 225 ~~ 226 (235)
|.
T Consensus 90 ~~ 91 (94)
T 3fap_B 90 FR 91 (94)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 331
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=34.86 E-value=62 Score=23.93 Aligned_cols=76 Identities=12% Similarity=0.061 Sum_probs=43.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHH---HhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC-C-HHHHHHHHHH
Q 026642 150 LKVVMQGNMRRGRNKEALEFVKRL---IDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL-L-LRALHDLGRY 224 (235)
Q Consensus 150 ~~~la~~~~~~g~~~eAi~~l~ka---i~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~-~-~~a~~~l~~~ 224 (235)
+.....+|+..++.+..++.++.+ ++..|... ...+-+.....+..+|.+.+++.....-. + -.+|..+..+
T Consensus 43 LeeASrlyf~~~n~~~m~~~L~pLh~~l~~~PeT~---~E~sF~~~fG~~L~~A~~~~~~y~~t~d~~~lnqAWd~Y~~V 119 (126)
T 2npu_A 43 LEEASRLYFGERNVKGMFEVLEPLHAMMERGPQTL---KETSFNQAYGRDLMEAQEWCRKYMKSGNVKDLTQAWDLYYHV 119 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCHHHHHHHHHHHHHHHccCCCCH---HHHHHHHHHhHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHH
Confidence 334566777888888888777666 44455542 22333333344566788888777543322 1 3555555555
Q ss_pred Hhhc
Q 026642 225 VSMT 228 (235)
Q Consensus 225 ~~~~ 228 (235)
+.+.
T Consensus 120 f~rI 123 (126)
T 2npu_A 120 FRRI 123 (126)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 332
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=34.19 E-value=1.9e+02 Score=25.70 Aligned_cols=82 Identities=10% Similarity=-0.049 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--------------CCCH--------HH-HHHHHHHHHHcCCHHHHHHHH
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIE--------------PNEV--------EW-KLLQALCYELMGKLSTAKRLF 204 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l~--------------P~~~--------~a-~~~lA~~~~~~g~~~~A~~~l 204 (235)
.....|+..+.+.|+|.||--++....++- +..+ +. +...+..+...+.|+.|+..+
T Consensus 36 ~~l~~L~~~h~~~~ny~EAa~~l~lhA~l~~w~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~ 115 (436)
T 2yin_A 36 RYLYKLRDLHLDCDNYTEAAYTLLLHTWLLKWSDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLC 115 (436)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHHHHHhCCCccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 345678888899999999888874332221 1110 11 222334455667799999999
Q ss_pred HHHHHHCC---CC----HHHHHHHHHHHhhch
Q 026642 205 KDILKERP---LL----LRALHDLGRYVSMTL 229 (235)
Q Consensus 205 ~kaL~~~P---~~----~~a~~~l~~~~~~~~ 229 (235)
+.++...- .+ ...+..++.+|.+..
T Consensus 116 k~L~~~yE~~~~Dy~~Ls~~~~~~a~~y~~I~ 147 (436)
T 2yin_A 116 KELAEQYEMEIFDYELLSQNLIQQAKFYESIM 147 (436)
T ss_dssp HHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98875443 23 455566666665544
No 333
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=33.95 E-value=2.2e+02 Score=24.17 Aligned_cols=27 Identities=11% Similarity=-0.129 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHH
Q 026642 179 NEVEWKLLQALCYELMGKLSTAKRLFK 205 (235)
Q Consensus 179 ~~~~a~~~lA~~~~~~g~~~~A~~~l~ 205 (235)
.+++.+..+|..|...|++.+|..+|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 378889999999999999999998773
No 334
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=33.68 E-value=1.6e+02 Score=22.40 Aligned_cols=58 Identities=14% Similarity=0.075 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhhCC--CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHH
Q 026642 164 KEALEFVKRLIDIEP--NEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDL 221 (235)
Q Consensus 164 ~eAi~~l~kai~l~P--~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l 221 (235)
+++.+.|+.+....- ..+..|...|..+...|++.+|.+.|+..++....-..-+...
T Consensus 82 ~dp~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~P~~rL~~~ 141 (152)
T 4a1g_A 82 SDLHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAEPREFLQQQ 141 (152)
T ss_dssp SCHHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSHHHHHHH
T ss_pred CCHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCccHHHHHHH
Confidence 448888888887554 4578888899999999999999999999999877665544433
No 335
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=33.46 E-value=1.2e+02 Score=20.84 Aligned_cols=28 Identities=7% Similarity=0.011 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 026642 163 NKEALEFVKRLIDIEPNEVEWKLLQALC 190 (235)
Q Consensus 163 ~~eAi~~l~kai~l~P~~~~a~~~lA~~ 190 (235)
+++|+.+++++-....++++.|...-.+
T Consensus 10 ~~~A~~YvnkVK~rF~~~p~~Y~~FL~I 37 (89)
T 1g1e_B 10 FNHAINYVNKIKNRFQGQPDIYKAFLEI 37 (89)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHH
Confidence 4456666666666555555555544333
No 336
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=33.38 E-value=20 Score=28.95 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=14.5
Q ss_pred HHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Q 026642 190 CYELMGKLSTAKRLFKDILKERPLLLRALHDLGRY 224 (235)
Q Consensus 190 ~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~ 224 (235)
+....|++++|.+.+++....++.+...-..|..+
T Consensus 126 VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~I 160 (211)
T 3bqo_A 126 VCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMI 160 (211)
T ss_dssp HHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHH
Confidence 44555555555555555555554443333333333
No 337
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=32.83 E-value=1.3e+02 Score=24.98 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CC-CHHHHHHHHHHH
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIE--PN-EVEWKLLQALCY 191 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l~--P~-~~~a~~~lA~~~ 191 (235)
+-+..++.+..+.++|++.+++++++++.+ ++ ..+=+.++..+|
T Consensus 9 e~~v~~AkLaeqaeRyddm~~~mk~v~~~~~~~eLt~EERnLLSvaY 55 (260)
T 1o9d_A 9 EENVYMAKLAEQAERYEEMVEFMEKVSNSLGSEELTVEERNLLSVAY 55 (260)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHH
Confidence 445566677777777777777777777766 43 344555555554
No 338
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=32.55 E-value=1.5e+02 Score=24.17 Aligned_cols=46 Identities=22% Similarity=0.191 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 026642 164 KEALEFVKRLID-----IEPNEVE---WKLLQALCYEL-MGKLSTAKRLFKDILK 209 (235)
Q Consensus 164 ~eAi~~l~kai~-----l~P~~~~---a~~~lA~~~~~-~g~~~~A~~~l~kaL~ 209 (235)
+.|.++|++|++ +.|.+|- ...+.++.|+. +|+.++|....++++.
T Consensus 147 e~a~~aY~~A~~iA~~~L~pthPirLgLaLN~SVF~yEil~~~~~A~~lAk~afd 201 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFD 201 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467778888774 5677763 33445555555 7999998887776654
No 339
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=32.45 E-value=44 Score=30.00 Aligned_cols=30 Identities=17% Similarity=0.092 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcC---------CHHHHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMG---------KLSTAKRLFKDILKE 210 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g---------~~~~A~~~l~kaL~~ 210 (235)
.-++..+|++|..+| +|++|++..++++..
T Consensus 188 ~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 188 GAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp HHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 457778999999888 899999999999874
No 340
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=32.42 E-value=1.5e+02 Score=30.62 Aligned_cols=61 Identities=11% Similarity=0.148 Sum_probs=37.8
Q ss_pred HHHHHHHHHHh-hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHh
Q 026642 165 EALEFVKRLID-IEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVS 226 (235)
Q Consensus 165 eAi~~l~kai~-l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~ 226 (235)
+-.+.|.++++ .|+++..+......-....|+|..|.+++.++++..|. -..+..++.++.
T Consensus 1267 ~~~~~~~el~k~~d~~d~k~~~~~~~~~~~~~~~g~~~k~l~k~~~~k~~-~~~~~~~~~~~~ 1328 (1354)
T 3lxu_X 1267 EINELYTEIIKFVDANDSKAIQFALWHAYAHGHYGRMYKYVVKLIEEKRT-RDHFVELAAING 1328 (1354)
T ss_dssp HHHHHHHHHTTSSCTTSTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHTCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCceeehhHHHHHHHHHHHHHHHHHHHHHHhcccc-HHHHHHHHHHHH
Confidence 34444555554 35555544443333344689999999999999998874 445555555543
No 341
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=32.35 E-value=28 Score=28.08 Aligned_cols=45 Identities=18% Similarity=0.150 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCC
Q 026642 152 VVMQGNMRRGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGK 196 (235)
Q Consensus 152 ~la~~~~~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~ 196 (235)
....+.++.|.+++|.+.+++...-++++......|..+-....-
T Consensus 122 qAV~VCiekg~Fk~A~eiLkr~f~~~~~~~~lr~kL~~II~~Kd~ 166 (211)
T 3bqo_A 122 QAIAVCMENGNFKEAEEVFERIFGDPNSHMPFKSKLLMIISQKDT 166 (211)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHC-----CCTTHHHHHHHHHTTCT
T ss_pred HHHHHHHHccchHHHHHHHHHHhcCCCCchHHHHHHHHHHHccCC
Confidence 445678999999999999999999888877777666665544443
No 342
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=31.97 E-value=1.4e+02 Score=24.75 Aligned_cols=45 Identities=18% Similarity=0.266 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CC-CHHHHHHHHHHHH
Q 026642 148 EALKVVMQGNMRRGRNKEALEFVKRLIDIE---PN-EVEWKLLQALCYE 192 (235)
Q Consensus 148 ~a~~~la~~~~~~g~~~eAi~~l~kai~l~---P~-~~~a~~~lA~~~~ 192 (235)
+-+..++.+..+.++|++.+++.+++++.+ ++ ..+=+.++.++|-
T Consensus 29 e~~v~~AkLaeqaeRyddmv~~mk~v~~~~~~~~eLt~EERnLLSvAyK 77 (260)
T 2npm_A 29 ESNVYMAKLAEQAERYDEMAKYMKDVVEARQESEELTVEERNLLSVAYK 77 (260)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHSCCC--CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Confidence 455567777888888888888888888876 43 3555666665553
No 343
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=31.88 E-value=1.4e+02 Score=24.75 Aligned_cols=46 Identities=17% Similarity=0.159 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHh----hCCCCH---HHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 026642 164 KEALEFVKRLID----IEPNEV---EWKLLQALCYEL-MGKLSTAKRLFKDILK 209 (235)
Q Consensus 164 ~eAi~~l~kai~----l~P~~~---~a~~~lA~~~~~-~g~~~~A~~~l~kaL~ 209 (235)
+.|.++|++|.+ +.|.+| ...++.++.|+. +|+.++|....++++.
T Consensus 173 e~a~~aY~~A~~iA~~L~pthPirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTHPIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567888888886 566665 233445555555 7999998888777765
No 344
>3k66_A Beta-amyloid-like protein; X-RAY amyloid precursor protein, heparin binding, alternative splicing, developmental protein, differentiation; 2.70A {Caenorhabditis elegans} PDB: 3k6b_A*
Probab=31.33 E-value=1.4e+02 Score=24.55 Aligned_cols=54 Identities=9% Similarity=0.073 Sum_probs=32.5
Q ss_pred CCHHHHHHHHHHHH--hhCCCCHHHHHH--HHHHHHHcCCHHHHHHHHHHHHHHCCCC
Q 026642 161 GRNKEALEFVKRLI--DIEPNEVEWKLL--QALCYELMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 161 g~~~eAi~~l~kai--~l~P~~~~a~~~--lA~~~~~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
.+-..|+++|..++ ..+|-++.-.+. ...+-....|-.=.+..|+.+...||.-
T Consensus 101 errr~Ale~y~~AL~~q~~pP~~~~Vl~aLk~yiRae~KDR~Htl~hy~Hl~~~dpe~ 158 (239)
T 3k66_A 101 EKKRDATHDYRQALATHVNKPNKHSVLQSLKAYIRAEEKDRMHTLNRYRHLLKADSKE 158 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHHH
Confidence 34567888888888 455555533222 2223333344445778888888888765
No 345
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=31.04 E-value=99 Score=27.91 Aligned_cols=31 Identities=6% Similarity=0.108 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
...|+..++++|+..++|++|+++.+++|..
T Consensus 181 k~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 181 KGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4468899999999999999999999999974
No 346
>3jq1_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 1.55A {Bacteroides vulgatus atcc 8482}
Probab=29.87 E-value=47 Score=29.84 Aligned_cols=31 Identities=13% Similarity=0.078 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 026642 145 RNVEALKVVMQGNMRRGRNKEALEFVKRLID 175 (235)
Q Consensus 145 ~~~~a~~~la~~~~~~g~~~eAi~~l~kai~ 175 (235)
+...|+..++++|+..++|++|+++.++++.
T Consensus 178 tk~aA~allarvyL~~~~~~~A~~~a~~vi~ 208 (481)
T 3jq1_A 178 TQGAAYAALGKIYVYEENWQEAINVLEPLTQ 208 (481)
T ss_dssp CHHHHHHHHHHHHHHTTCHHHHHHHHGGGGS
T ss_pred cHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 3446888999999999999999999999985
No 347
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=29.49 E-value=82 Score=24.01 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=37.7
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 026642 132 VEEMFEKLLEK--EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN 179 (235)
Q Consensus 132 A~~~~e~aL~~--~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~ 179 (235)
+.+.|+..... .-..+..|...|..+...|++++|.+.|++.|+.+-.
T Consensus 84 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 133 (152)
T 4a1g_A 84 LHQFFEFLYNHGIGTLSSPLYIAWAGHLEAQGELQHASAVLQRGIQNQAE 133 (152)
T ss_dssp HHHHHHHHHTTTTTTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHHCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 55566555443 4567788888999999999999999999999997643
No 348
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=27.76 E-value=1.5e+02 Score=20.38 Aligned_cols=55 Identities=22% Similarity=0.196 Sum_probs=32.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCC----HHHHHHHH--HHHHHcCCHHHHHHHHHHHHH
Q 026642 153 VMQGNMRRGRNKEALEFVKRLIDIEPNE----VEWKLLQA--LCYELMGKLSTAKRLFKDILK 209 (235)
Q Consensus 153 la~~~~~~g~~~eAi~~l~kai~l~P~~----~~a~~~lA--~~~~~~g~~~~A~~~l~kaL~ 209 (235)
.|..++..|+|=+|=+.++.+-...|+. ....+.+| ..+...|+. |...+++++.
T Consensus 7 ~~~~lfn~g~~~eaHEvlE~~W~~~~~~~~~~~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 7 EVLGLWRAGRYYEVHEVLEPYWLKATGEERRLLQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHhCCChHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 3555666677777777777777766442 12223333 334455666 7777777755
No 349
>2v7s_A Probable conserved lipoprotein LPPA; unknown function, putative lipoprotein; 1.96A {Mycobacterium tuberculosis}
Probab=27.25 E-value=19 Score=29.18 Aligned_cols=29 Identities=7% Similarity=-0.074 Sum_probs=21.7
Q ss_pred cchHHHHHHHHhcCCHHHHHHHHHHHHHh
Q 026642 114 RASENLKEKRDALMGKSEVEEMFEKLLEK 142 (235)
Q Consensus 114 ~~~~~~~e~~~~~~~~~eA~~~~e~aL~~ 142 (235)
..+..+++.+.....++++.+.++.++..
T Consensus 44 eqva~~ed~lR~kps~E~a~~~l~Aal~r 72 (215)
T 2v7s_A 44 EQKIQLIDSMRNKGSYEAARERLTATARI 72 (215)
T ss_dssp HHHHHHHHHHGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 45566777787888888888888877653
No 350
>1ixm_A SPO0B, protein (sporulation response regulatory protein); phosphotransferase, two component system; 2.60A {Bacillus subtilis} SCOP: d.123.1.1 PDB: 2ftk_A* 1f51_A
Probab=27.22 E-value=63 Score=25.41 Aligned_cols=43 Identities=12% Similarity=0.205 Sum_probs=29.8
Q ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 134 EMFEKLLEKEPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 134 ~~~e~aL~~~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
+.|-.+|+..-++.-=.......+++.|+|++|.+++++..+.
T Consensus 19 ~~~~~~LR~qrHdf~NkLqvI~GLlql~~ydea~~yI~~~~~~ 61 (192)
T 1ixm_A 19 NELIHLLGHSRHDWMNKLQLIKGNLSLQKYDRVFEMIEEMVID 61 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3444445444444444556677889999999999999887764
No 351
>3umh_A Amyloid beta A4 protein; metal binding site, metal binding, cell surface, secretory P metal binding protein; 2.00A {Homo sapiens} SCOP: a.47.4.1 PDB: 3umi_A 3umk_A 1rw6_A 3nyl_A 3nyj_A 1tkn_A
Probab=26.86 E-value=1.1e+02 Score=24.63 Aligned_cols=52 Identities=12% Similarity=0.200 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCCCH
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRR--GRNKEALEFVKRLIDIEPNEV 181 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~--g~~~eAi~~l~kai~l~P~~~ 181 (235)
..|.+.|..+|..+|-++.-.......|.+. ++-.-.+..|+.+...||..+
T Consensus 102 r~Ale~y~~ALq~~pp~~~~il~aLk~yirae~KDR~Hti~hy~Hv~~~dpe~A 155 (211)
T 3umh_A 102 RLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKA 155 (211)
T ss_dssp HHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCHHHH
Confidence 4466677777776666665544444444432 333346677777777666543
No 352
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=26.74 E-value=82 Score=28.43 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=21.5
Q ss_pred HHHHHHHHHHH------HcCCHHHHHHHHHHHHH
Q 026642 182 EWKLLQALCYE------LMGKLSTAKRLFKDILK 209 (235)
Q Consensus 182 ~a~~~lA~~~~------~~g~~~~A~~~l~kaL~ 209 (235)
-++.++|++|. .+++|++|++..++++.
T Consensus 189 aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 189 VASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp HHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 35666777666 56899999999999885
No 353
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=26.40 E-value=1.3e+02 Score=27.31 Aligned_cols=31 Identities=13% Similarity=0.149 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 146 NVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 146 ~~~a~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
...|+..++++|+-.++|++|+++.+++|..
T Consensus 197 k~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 197 KQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 3468899999999999999999999999974
No 354
>3snx_A SUSD homolog, putative SUSD-like carbohydrate binding protein; alpha-alpha superhelix, structural genomics; HET: MSE; 1.88A {Bacteroides thetaiotaomicron}
Probab=26.13 E-value=54 Score=29.33 Aligned_cols=33 Identities=12% Similarity=0.038 Sum_probs=28.7
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 026642 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDI 176 (235)
Q Consensus 144 P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l 176 (235)
++-..|+..++++|+..|+|++|+++.+++|..
T Consensus 188 ~tk~aA~aLlARvyL~~~~~~~A~~~a~~vi~~ 220 (460)
T 3snx_A 188 PNTDVVNGLMARAYLLTGQWGEAAKAAEAARKG 220 (460)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 344568899999999999999999999999864
No 355
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=25.81 E-value=2.3e+02 Score=23.32 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHh-----hCCCCHH---HHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 026642 164 KEALEFVKRLID-----IEPNEVE---WKLLQALCYEL-MGKLSTAKRLFKDILK 209 (235)
Q Consensus 164 ~eAi~~l~kai~-----l~P~~~~---a~~~lA~~~~~-~g~~~~A~~~l~kaL~ 209 (235)
+.|.++|++|.+ +.|.+|- ..++.++.|+. +++.++|....++++.
T Consensus 148 ~~a~~aY~~A~~iA~~~L~pthPirLGLaLNfSVFyYEIln~~~~Ac~lAk~Afd 202 (248)
T 3uzd_A 148 ESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEIQNAPEQACHLAKTAFD 202 (248)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 567788888764 6677763 33445555555 7999988777666644
No 356
>3pmr_A Amyloid-like protein 1; heparin binding, cell adhesion; 2.11A {Homo sapiens} SCOP: a.47.4.0 PDB: 3q7l_A 3q7g_A 3qmk_A*
Probab=25.38 E-value=86 Score=25.48 Aligned_cols=50 Identities=16% Similarity=0.353 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc--CCHHHHHHHHHHHHhhCCC
Q 026642 130 SEVEEMFEKLLEKEPRNVEALKVVMQGNMRR--GRNKEALEFVKRLIDIEPN 179 (235)
Q Consensus 130 ~eA~~~~e~aL~~~P~~~~a~~~la~~~~~~--g~~~eAi~~l~kai~l~P~ 179 (235)
..|.+.|..+|..+|-++.-.......|.+. ++-.-.+..|+.+...||.
T Consensus 109 r~Ale~y~~ALq~~pP~~~~vl~aLk~yirae~KDR~Htl~hf~Hv~~~dpe 160 (219)
T 3pmr_A 109 RAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPE 160 (219)
T ss_dssp HHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhHHHHHHHHHccCHH
Confidence 3455666666666655555444444444332 2333456666666666654
No 357
>3l22_A SUSD superfamily protein; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.05A {Bacteroides fragilis}
Probab=25.27 E-value=32 Score=30.50 Aligned_cols=29 Identities=14% Similarity=0.088 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 026642 180 EVEWKLLQALCYELMGKLSTAKRLFKDIL 208 (235)
Q Consensus 180 ~~~a~~~lA~~~~~~g~~~~A~~~l~kaL 208 (235)
..-++..+|++|..+|+|++|++..++++
T Consensus 200 k~aA~allarvyL~~~~~~~A~~~a~~vi 228 (441)
T 3l22_A 200 QAAANMLKMRVYMAMNEWDKAITAGELVT 228 (441)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 34567789999999999999999999887
No 358
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=24.92 E-value=1.1e+02 Score=23.61 Aligned_cols=34 Identities=9% Similarity=-0.083 Sum_probs=21.1
Q ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 026642 144 PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIE 177 (235)
Q Consensus 144 P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~ 177 (235)
-..+..|...|..+...|++.+|.+.|+..|+.+
T Consensus 93 ~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~ 126 (164)
T 2wvi_A 93 VSLAQFYISWAEEYEARENFRKADAIFQEGIQQK 126 (164)
T ss_dssp TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 3445556666666666666666666666666654
No 359
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=23.31 E-value=2.1e+02 Score=20.54 Aligned_cols=51 Identities=14% Similarity=0.120 Sum_probs=34.4
Q ss_pred cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCC
Q 026642 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPL 213 (235)
Q Consensus 160 ~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~ 213 (235)
.-..+||...-+- ++..++.--+-..+...+.+.|+|++|....+..- .|+
T Consensus 19 ~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~pd 69 (115)
T 2uwj_G 19 QHCHEEALCIAEW-LERLGQDEAARLIRISSLANQGRYQEALAFAHGNP--WPA 69 (115)
T ss_dssp TTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHGGGTTCC--CGG
T ss_pred chHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC--Cch
Confidence 3456777665554 45556643455567788999999999998776553 454
No 360
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=23.29 E-value=1.1e+02 Score=24.83 Aligned_cols=48 Identities=15% Similarity=0.041 Sum_probs=35.8
Q ss_pred HHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 026642 132 VEEMFEKLLEK--EPRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPN 179 (235)
Q Consensus 132 A~~~~e~aL~~--~P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~ 179 (235)
+.++|...... .-..+..|...|..+...|++++|.+.|++.|+..-.
T Consensus 133 p~~if~~L~~~~IG~~~AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~~A~ 182 (223)
T 4aez_C 133 PVELFSFLAHHHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAK 182 (223)
T ss_dssp HHHHHHHHHHTTCSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCB
T ss_pred HHHHHHHHHHCCcchhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCc
Confidence 34445444432 3456677888888999999999999999999997644
No 361
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=23.25 E-value=2.5e+02 Score=21.45 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Q 026642 164 KEALEFVKRLIDIE--PNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLLL 215 (235)
Q Consensus 164 ~eAi~~l~kai~l~--P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~ 215 (235)
+++.+.|..+.... -..+..|...|..+...|++.+|.+.|+..++....-.
T Consensus 77 ~~p~~if~~L~~~~IG~~~AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~~~A~P~ 130 (164)
T 2wvi_A 77 NEPLDMYSYLHNQGIGVSLAQFYISWAEEYEARENFRKADAIFQEGIQQKAEPL 130 (164)
T ss_dssp SCHHHHHHHHHHTTSSTTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBSH
T ss_pred CCHHHHHHHHHHCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcH
Confidence 34777788877654 45688888999999999999999999999999876553
No 362
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=22.56 E-value=2.2e+02 Score=20.47 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=35.5
Q ss_pred cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC
Q 026642 160 RGRNKEALEFVKRLIDIEPNEVEWKLLQALCYELMGKLSTAKRLFKDILKERPLL 214 (235)
Q Consensus 160 ~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~ 214 (235)
.-..+||....+- ++..++.--+-..+...+.+.|+|++|....+..- .|+-
T Consensus 20 ~H~HqEA~tIAdw-L~~~~~~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c--~pdl 71 (116)
T 2p58_C 20 NHYHEEANCIAEW-LHLKGEEEAVQLIRLSSLMNRGDYASALQQGNKLA--YPDL 71 (116)
T ss_dssp TTCHHHHHHHHHH-HHHTTCHHHHHHHHHHHHHHTTCHHHHHHHHTTSC--CGGG
T ss_pred chHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHcchhHHHHHHhcCCCC--CchH
Confidence 4457777765554 45556643455567788999999999998887654 5553
No 363
>3ihv_A SUSD homolog; NP_813570.1, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.29 E-value=1.4e+02 Score=27.01 Aligned_cols=29 Identities=14% Similarity=0.071 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHc--------CCHHHHHHHHHHHHHH
Q 026642 182 EWKLLQALCYELM--------GKLSTAKRLFKDILKE 210 (235)
Q Consensus 182 ~a~~~lA~~~~~~--------g~~~~A~~~l~kaL~~ 210 (235)
-++.++|++|..+ ++|++|++..++++..
T Consensus 197 aA~allarvyL~~a~~~~~~~~~~~~A~~~a~~vi~~ 233 (535)
T 3ihv_A 197 AALGLLTKVYATWAGYPVKDESKWEAAAKTARILVES 233 (535)
T ss_dssp HHHHHHHHHHHHHHSTTTCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHccCCcccCHHHHHHHHHHHHHHHhc
Confidence 4677888888886 5799999999999874
No 364
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=21.80 E-value=3.2e+02 Score=22.12 Aligned_cols=57 Identities=19% Similarity=0.084 Sum_probs=37.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHh----hCCC-CHHHHHHHHHHHHHc-CCHHHHHHHHHHHH
Q 026642 152 VVMQGNMRRGRNKEALEFVKRLID----IEPN-EVEWKLLQALCYELM-GKLSTAKRLFKDIL 208 (235)
Q Consensus 152 ~la~~~~~~g~~~eAi~~l~kai~----l~P~-~~~a~~~lA~~~~~~-g~~~~A~~~l~kaL 208 (235)
.++.+.-+.++|++.+++..++++ .+++ ..+=++++..+|-.. |..-.+-+.+..+-
T Consensus 11 ~~AKlaeqaeRyddM~~~mk~v~~~~~~~~~eLt~EERnLLSvAYKNvig~rR~swRiissiE 73 (227)
T 2o8p_A 11 YRAQVFEWGGCFDKMFEALKSLIYLSEFENSEFDDEERHLLTLCIKHKISDYRTMTSQVLQEQ 73 (227)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhhccCCCCCHHHHHHHHHHHHHhhcccHHHHHHHHHHH
Confidence 567778888888888888888888 6654 356666777666443 43444444443333
No 365
>3ckc_A SUSD; TPR repeat, carbohydrate binding, starch binding, sugar BIND protein; HET: MES; 1.50A {Bacteroides thetaiotaomicron} SCOP: a.118.8.6 PDB: 3ck8_A* 3ck9_A* 3ckb_A* 3ck7_A*
Probab=21.74 E-value=1.6e+02 Score=26.13 Aligned_cols=46 Identities=11% Similarity=-0.010 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhCCC----------CHHHHHHHHHHHHHc------CCHHHHHHHHHHHHH
Q 026642 164 KEALEFVKRLIDIEPN----------EVEWKLLQALCYELM------GKLSTAKRLFKDILK 209 (235)
Q Consensus 164 ~eAi~~l~kai~l~P~----------~~~a~~~lA~~~~~~------g~~~~A~~~l~kaL~ 209 (235)
+..++.++.|++.=|. ..-++..+|++|... ++|++|++..++++.
T Consensus 170 ~~I~~DL~~A~~~Lp~~~~~~~gr~tk~aA~allArvyL~~~~~~~~~~~~~A~~~a~~vi~ 231 (527)
T 3ckc_A 170 TYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG 231 (527)
T ss_dssp HHHHHHHHHHGGGSCCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCccCCCCCCCcHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHh
Confidence 3445555666553231 235677788888865 899999999999985
No 366
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=20.97 E-value=85 Score=28.07 Aligned_cols=32 Identities=6% Similarity=-0.080 Sum_probs=27.4
Q ss_pred CCHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHhh
Q 026642 145 RNVEALKVVMQGNMRRG---------RNKEALEFVKRLIDI 176 (235)
Q Consensus 145 ~~~~a~~~la~~~~~~g---------~~~eAi~~l~kai~l 176 (235)
+-..|+..++++|+-.+ +|++|+++.+++|..
T Consensus 186 tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 186 SMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp CHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 34568888999999888 899999999999974
No 367
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=20.77 E-value=1.4e+02 Score=21.68 Aligned_cols=49 Identities=16% Similarity=0.306 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 026642 130 SEVEEMFEKLLEKE-PRNVEALKVVMQGNMRRGRNKEALEFVKRLIDIEPNE 180 (235)
Q Consensus 130 ~eA~~~~e~aL~~~-P~~~~a~~~la~~~~~~g~~~eAi~~l~kai~l~P~~ 180 (235)
.+|+..|.+++... +.+.+-...+...-.+. --+|+.+|++++..-|+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~el~~lIr~~ika--E~~AI~~Y~qLA~~AP~e 61 (115)
T 2hz8_A 12 QQAIKIYKEVLKKAKEGDEQELARLIQEIVKA--EKQAVKVYKEAAEKARNP 61 (115)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHTTTHHHHHHH--HHHHHHHHHHHHHSCCCT
T ss_pred HHHHHHHHHHhcccccccHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCH
Confidence 56888898888753 34444444444443333 568999999999999984
No 368
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=25.94 E-value=21 Score=33.92 Aligned_cols=52 Identities=13% Similarity=-0.123 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHhhchhhc
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDILKERPLLLRALHDLGRYVSMTLQIQ 232 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~~P~~~~a~~~l~~~~~~~~~~~ 232 (235)
.+....+|+-.+..|+|.-|.+.++.++..+|+|..+..-++.+|.+.+...
T Consensus 461 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~ 512 (668)
T 2yhe_A 461 ADAVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQT 512 (668)
Confidence 3455567788889999999999999999999999988888888887776543
No 369
>4gq4_A Menin; tumor suppressor, nucleus, transcription-transcription inhib complex; HET: 0RT EPE PE4; 1.27A {Homo sapiens} PDB: 4gq3_A* 4gpq_A* 4gq6_A*
Probab=20.46 E-value=3.3e+02 Score=24.55 Aligned_cols=58 Identities=9% Similarity=-0.095 Sum_probs=36.1
Q ss_pred HHHHHHHHHhh-----CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH------CCCCHHHHHHHHH
Q 026642 166 ALEFVKRLIDI-----EPNEVEWKLLQALCYELMGKLSTAKRLFKDILKE------RPLLLRALHDLGR 223 (235)
Q Consensus 166 Ai~~l~kai~l-----~P~~~~a~~~lA~~~~~~g~~~~A~~~l~kaL~~------~P~~~~a~~~l~~ 223 (235)
++..|+++|.. +-....-|..+|-.++..++|.+|+..+-.+-.. .-+|.+.|.++..
T Consensus 283 ~~~Lf~~AI~~ar~~Y~~~hvYPYtYlgG~~~R~~~~~eAl~~wa~aa~Vi~~YnY~reDeEiYke~~e 351 (489)
T 4gq4_A 283 PLTLYHKGIASAKTYYRDEHIYPYMYLAGYHCRNRNVREALQAWADTATVIQDYNYCREDEEIYKEFFE 351 (489)
T ss_dssp HHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCCCTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcccceeecchHHHHhhhHHHHHHHhhhhhhhhhhcccccchHHHHHHHHH
Confidence 44555555542 1223455666788899999999999999776442 2334566655433
No 370
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=20.39 E-value=1.1e+02 Score=21.71 Aligned_cols=27 Identities=30% Similarity=0.295 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 026642 181 VEWKLLQALCYELMGKLSTAKRLFKDI 207 (235)
Q Consensus 181 ~~a~~~lA~~~~~~g~~~~A~~~l~ka 207 (235)
++....-|.-....|+|++|.+.++++
T Consensus 20 ArS~~~eAl~~Ak~g~fe~A~~~l~eA 46 (105)
T 2e2a_A 20 ARSKLLEALKAAENGDFAKADSLVVEA 46 (105)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 344444444455555555555555544
No 371
>3jys_A SUSD superfamily protein; structural genomic center for structural genomics, JCSG, protein structure INI PSI-2, RAGB; HET: MSE; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=20.27 E-value=1.2e+02 Score=27.20 Aligned_cols=31 Identities=13% Similarity=0.210 Sum_probs=25.6
Q ss_pred CCHHHHHHHHHHHH------HcCCHHHHHHHHHHHHh
Q 026642 145 RNVEALKVVMQGNM------RRGRNKEALEFVKRLID 175 (235)
Q Consensus 145 ~~~~a~~~la~~~~------~~g~~~eAi~~l~kai~ 175 (235)
+...|+..++++|+ ..++|++|+++.+++|.
T Consensus 186 tk~aA~allarvyL~~~~y~~~~~~~~A~~~a~~vi~ 222 (499)
T 3jys_A 186 DQAVASALLARMYLNAEIYTGKARYTECINACNEVIK 222 (499)
T ss_dssp CHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhhccChhHHHHHHHHHHHHHh
Confidence 34457888888887 57899999999999995
No 372
>2ehw_A Hypothetical protein TTHB059; extended alpha-helix, NPPSFA, national project on protein ST and functional analyses; 2.22A {Thermus thermophilus}
Probab=20.01 E-value=77 Score=23.08 Aligned_cols=32 Identities=25% Similarity=0.267 Sum_probs=21.2
Q ss_pred HcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 026642 159 RRGRNKEALEFVKRLIDIEPNEVEWKLLQALC 190 (235)
Q Consensus 159 ~~g~~~eAi~~l~kai~l~P~~~~a~~~lA~~ 190 (235)
-...++.|+..++.-+..||..+.++..+-.+
T Consensus 53 l~r~ldaALvdLEe~ia~dPe~~YlRg~Lvav 84 (120)
T 2ehw_A 53 LEEALREALLHLEERAAQEPEEPYWRGLLLAV 84 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCccchHHHHHHHHH
Confidence 34446667777777777788887776665443
Done!