BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026643
(235 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BG09|T184B_MOUSE Transmembrane protein 184B OS=Mus musculus GN=Tmem184b PE=2 SV=1
Length = 407
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 115/201 (57%), Gaps = 14/201 (6%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H + +P EQ+ I+ I+ + PIYA DS++ L+ F + ++++ +V++CYEA VI F
Sbjct: 68 HLRCYSRPNEQRHIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEAFVIYNF 126
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
L+L Y YL ++ + EI+G+ I S + +T + L+ K T QF
Sbjct: 127 LSLCYEYLG---GESAIMSEIRGKAIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181
Query: 147 VIRPVCSILMIALQLLGLYSNW---ISWTF---TIILNISVSLALYSLVIFYHVFAKELA 200
V++P+ ++ + LQ G Y + ++ + TII NISVSLALY+L +FY + L+
Sbjct: 182 VVKPLMAVSTVILQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLS 241
Query: 201 PHKPLSKFLCIKGIVFFCFWQ 221
P+ P+ KF +K ++F FWQ
Sbjct: 242 PYSPVLKFFMVKSVIFLSFWQ 262
>sp|Q6ZMB5|T184A_HUMAN Transmembrane protein 184A OS=Homo sapiens GN=TMEM184A PE=2 SV=1
Length = 413
Score = 118 bits (296), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 112/199 (56%), Gaps = 10/199 (5%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H S+ P+EQ+ II ++L+ PIYA DS++ L+ G ++++ +SV++CYEA VI F
Sbjct: 77 HLRSYTVPQEQRYIIRLLLIVPIYAFDSWLSLL-LLGDHQYYVYFDSVRDCYEAFVIYSF 135
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
L+L + YL + + EI+G+ I S R + L+ K T QF ++
Sbjct: 136 LSLCFQYLG---GEGAIMAEIRGKPIKSSCLYGTCCLRGMTYSIGFLRFCKQATLQFCLV 192
Query: 149 RPVCSILMIALQLLGLYSNW---ISWTF---TIILNISVSLALYSLVIFYHVFAKELAPH 202
+PV ++ I LQ G Y + + + T+I N SVSLALY+L +FY + L P
Sbjct: 193 KPVMAVTTIILQAFGKYHDGDFNVRSGYLYVTLIYNASVSLALYALFLFYFTTRELLRPF 252
Query: 203 KPLSKFLCIKGIVFFCFWQ 221
+P+ KFL IK ++F FWQ
Sbjct: 253 QPVLKFLTIKAVIFLSFWQ 271
>sp|A2VDL9|T184B_BOVIN Transmembrane protein 184B OS=Bos taurus GN=TMEM184B PE=2 SV=1
Length = 407
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 14/201 (6%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H + P EQ+ I+ I+ + PIYA DS++ L+ F + ++++ +V++CYEALVI F
Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNF 126
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
L+L Y YL ++ + EI+G+ I S + +T + L+ K T QF
Sbjct: 127 LSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181
Query: 147 VIRPVCSILMIALQLLGLYSNW---ISWTF---TIILNISVSLALYSLVIFYHVFAKELA 200
V++P+ ++ + LQ G Y + ++ + TII NISVSLALY+L +FY + L+
Sbjct: 182 VVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLS 241
Query: 201 PHKPLSKFLCIKGIVFFCFWQ 221
P+ P+ KF +K ++F FWQ
Sbjct: 242 PYSPVLKFFMVKSVIFLSFWQ 262
>sp|Q9Y519|T184B_HUMAN Transmembrane protein 184B OS=Homo sapiens GN=TMEM184B PE=1 SV=2
Length = 407
Score = 118 bits (295), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 115/201 (57%), Gaps = 14/201 (6%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H + P EQ+ I+ I+ + PIYA DS++ L+ F + ++++ +V++CYEALVI F
Sbjct: 68 HLRCYSCPNEQRYIVRILFIVPIYAFDSWLSLLFFTNDQ-YYVYFGTVRDCYEALVIYNF 126
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHS--FPMTLFQPRTARLNHHTLKLLKDWTWQFV 146
L+L Y YL ++ + EI+G+ I S + +T + L+ K T QF
Sbjct: 127 LSLCYEYLG---GESSIMSEIRGKPIESSCMYGTCCLWGKTYSIGF--LRFCKQATLQFC 181
Query: 147 VIRPVCSILMIALQLLGLYSNW---ISWTF---TIILNISVSLALYSLVIFYHVFAKELA 200
V++P+ ++ + LQ G Y + ++ + TII NISVSLALY+L +FY + L+
Sbjct: 182 VVKPLMAVSTVVLQAFGKYRDGDFDVTSGYLYVTIIYNISVSLALYALFLFYFATRELLS 241
Query: 201 PHKPLSKFLCIKGIVFFCFWQ 221
P+ P+ KF +K ++F FWQ
Sbjct: 242 PYSPVLKFFMVKSVIFLSFWQ 262
>sp|Q54PI4|T1841_DICDI Transmembrane protein 184 homolog DDB_G0284525 OS=Dictyostelium
discoideum GN=tmem184A PE=3 SV=1
Length = 493
Score = 114 bits (284), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 118/221 (53%), Gaps = 18/221 (8%)
Query: 8 FMAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSK 67
F A++ V+L T S L+ +H + +P Q+ I+ I+ M PIYAI S + L+ +
Sbjct: 53 FALASLFVLLATILSAHLIYKHLKYYTQPDHQRYIVRIVFMIPIYAIYSLLSLL-LHNYQ 111
Query: 68 AFFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTL-FQPR 126
+F L ++CYEA V+ F AL SY KN+V + P+ F+P
Sbjct: 112 VYFALL---RDCYEAYVLYMFFALCVSYG--GGDKNLVTHFTSHPVMRLPMPLFFKFKPN 166
Query: 127 TARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYS------NWISWTFTIILNIS 180
A L + +L Q+V++RP ++ ++ GLY N + I+N+S
Sbjct: 167 EAFLQVCRMGML-----QYVLVRPAVTLASAIFEIFGLYDEGSYAINRFYFYNAFIINVS 221
Query: 181 VSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
V++ALY +V+FY A+ELAP+KPL KF IK +VFFCFWQ
Sbjct: 222 VTVALYIVVLFYQAAAEELAPYKPLLKFTSIKIVVFFCFWQ 262
>sp|Q3UFJ6|T184A_MOUSE Transmembrane protein 184A OS=Mus musculus GN=Tmem184a PE=2 SV=1
Length = 425
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 14/215 (6%)
Query: 13 VCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMF 72
++LT H Q+ S H S+ P+EQ+ +I ++ + PIYA DS++ + G ++++
Sbjct: 68 TALLLTGH---QIYS-HLRSYTAPREQRFVIRLLFIVPIYAFDSWL-SLLLLGGHPYYVY 122
Query: 73 LESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNH 132
+SV++CYEA VI FL L + YL ++ + EI+G+ I S R +
Sbjct: 123 FDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSI 179
Query: 133 HTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNW---ISWTF---TIILNISVSLALY 186
L+ K T QF +++PV +++ I LQ Y + I + T++ N SVSLALY
Sbjct: 180 TFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYLYVTLVYNASVSLALY 239
Query: 187 SLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+L +FY L P +P+ KFL IK I+F FWQ
Sbjct: 240 ALFLFYFATRDLLRPFEPVLKFLTIKAIIFLSFWQ 274
>sp|Q5RET6|T184C_PONAB Transmembrane protein 184C OS=Pongo abelii GN=TMEM184C PE=2 SV=1
Length = 438
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S ++ +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPGIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H FP P A +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RP +I+ + +LLG+Y +WT+ +I+N +S A
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQLFA 224
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ
Sbjct: 225 MYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQ 261
>sp|Q9NVA4|T184C_HUMAN Transmembrane protein 184C OS=Homo sapiens GN=TMEM184C PE=2 SV=2
Length = 438
Score = 112 bits (279), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S ++ +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPGIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H FP P A +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLILEAKDQQKH--FPPLCCCPPWA-M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RP +I+ + +LLG+Y +WT+ +I+N +S A
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIVALICELLGIYDEGNFSFSNAWTYLVIINNMSQLFA 224
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ
Sbjct: 225 MYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQ 261
>sp|Q3TPR7|T184C_MOUSE Transmembrane protein 184C OS=Mus musculus GN=Tmem184c PE=2 SV=1
Length = 525
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S + +H + + +P+ QK II I+ M PIY++DS+V L+
Sbjct: 52 AGIFLLLTIPVSLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWVALV----YPKIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL I I+ E K ++ +H P+ P +
Sbjct: 108 IYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLILHLEAKDQQ-NHILPLCCCPPWA--M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RP+ ++ + ++L +Y +WT+ +ILN +S A
Sbjct: 165 GEMLLFRCKLGVLQYTVVRPITTVTALVCEILDVYDEGNFGFSNAWTYLVILNNLSQLFA 224
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ
Sbjct: 225 MYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQ 261
>sp|Q4QQS1|T184A_RAT Transmembrane protein 184A OS=Rattus norvegicus GN=Tmem184a PE=2
SV=1
Length = 425
Score = 111 bits (277), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 117/215 (54%), Gaps = 14/215 (6%)
Query: 13 VCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMF 72
++LT H Q+ S H S+ P+EQ+ +I ++ + PIYA DS++ + G ++++
Sbjct: 68 TALLLTGH---QIYS-HLRSYTVPREQRFVIRLLFIVPIYAFDSWL-SLLLLGGHPYYVY 122
Query: 73 LESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNH 132
+SV++CYEA VI FL L + YL ++ + EI+G+ I S R +
Sbjct: 123 FDSVRDCYEAFVIYSFLTLCFQYLG---GESAIMAEIRGKPIRSSCFYGTCCLRGMSYSI 179
Query: 133 HTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNW---ISWTF---TIILNISVSLALY 186
L+ K T QF +++PV +++ I LQ Y + I + T++ N SVSLALY
Sbjct: 180 TFLRFCKQATLQFCIVKPVMALITIILQAFDKYHDGDFNIHSGYLYVTLVYNASVSLALY 239
Query: 187 SLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+L +FY L P +P+ KFL IK I+F FWQ
Sbjct: 240 ALFLFYFATRDLLRPFEPVLKFLTIKAIIFLSFWQ 274
>sp|Q28CV2|T184C_XENTR Transmembrane protein 184C OS=Xenopus tropicalis GN=tmem184c PE=2
SV=1
Length = 443
Score = 110 bits (276), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 117/217 (53%), Gaps = 13/217 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + V++T S + +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 50 AGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIAL----KYPDIA 105
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL + E K ++ H P+ P +
Sbjct: 106 IYVDTCRECYEAYVIYNFMIFLLNYLTNRCPNLALVLEAKDQQ-RHLPPLCCCPPWA--M 162
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RPV +++ + QL G+Y +WT+ +I+N +S A
Sbjct: 163 GDVLLFRCKLGVLQYTVVRPVTTVIALICQLTGVYGEGDFSVKNAWTYLVIINNVSQVFA 222
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+Y LV+FY V +EL P +P+ KFLC+K +VF FWQ
Sbjct: 223 MYCLVLFYKVLKEELNPIQPVGKFLCVKMVVFVSFWQ 259
>sp|Q54WM0|T1843_DICDI Transmembrane protein 184 homolog DDB_G0279555 OS=Dictyostelium
discoideum GN=tmem184C PE=3 SV=1
Length = 351
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 22/223 (9%)
Query: 9 MAATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKA 68
+ A VC + S L+ +H ++ P+ QK I+ I++M PIY++DS++ L + S
Sbjct: 3 IVAGVCSGVAILLSFYLIYKHLRNYTNPELQKYIVRILIMVPIYSVDSWLSLRFVELS-- 60
Query: 69 FFMFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTA 128
++ + V++ YEA V+ F +L+ +Y+ ++V + H FP+T P+
Sbjct: 61 --LYFDVVRDTYEAYVLYCFFSLIVAYIERDF--DLVELLHSKEPLPHPFPLTCL-PKI- 114
Query: 129 RLNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSN----------WISWTFTIILN 178
+L+ L K + QFV I+P+ +I+ + L+ Y W+ T++ N
Sbjct: 115 KLDRGFLTNCKRFVLQFVFIKPIVAIISLVLETQHKYGEGKFQVGTGYVWL----TVVEN 170
Query: 179 ISVSLALYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
ISV L+LY LV++Y +EL P KPL KFLCIK I+FF FWQ
Sbjct: 171 ISVGLSLYFLVLYYKAMEEELKPFKPLGKFLCIKSILFFSFWQ 213
>sp|Q6GQE1|T184C_XENLA Transmembrane protein 184C OS=Xenopus laevis GN=tmem184c PE=2 SV=1
Length = 444
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 117/217 (53%), Gaps = 13/217 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + V++T S + +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 50 AGIFVLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSVDSWIAL----KYPDIA 105
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL + E K ++ H P+ P +
Sbjct: 106 IYVDTCRECYEAYVIYNFMIFLLNYLTNRCPNLALVLEAKDQQ-RHLPPLCCCPPWA--M 162
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RPV +++ + QL G+Y +WT+ +I+N +S A
Sbjct: 163 GDVLLFRCKLGVLQYTVVRPVTTVIALICQLTGVYGEGDFSVKNAWTYLVIINNVSQVFA 222
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+Y LV+FY V +EL P +P+ KFLC+K +VF FWQ
Sbjct: 223 MYCLVLFYKVLKEELNPIQPVGKFLCVKMVVFVSFWQ 259
>sp|Q17QL9|T184C_BOVIN Transmembrane protein 184C OS=Bos taurus GN=TMEM184C PE=2 SV=1
Length = 438
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 121/217 (55%), Gaps = 13/217 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S ++ +H + + +P+ QK II I+ M PIY++DS++ L +
Sbjct: 52 AGIFLLLTIPISLWVILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPSIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H P+ P T +
Sbjct: 108 IYVDTCRECYEAYVIYNFMGFLTNYLTNRYPNLVLIIEAKDQQKHFP-PLCCCPPWT--M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RP +I+ + +LL +Y +WT+ +I+N +S A
Sbjct: 165 GEVLLFRCKLGVLQYTVVRPFTTIIALVCELLDIYDEGNFSFSNAWTYLVIINNMSQLFA 224
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ
Sbjct: 225 MYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQ 261
>sp|Q1RMW2|T184A_BOVIN Transmembrane protein 184A OS=Bos taurus GN=TMEM184A PE=2 SV=1
Length = 414
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 110/199 (55%), Gaps = 10/199 (5%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H S+ P EQ+ II ++ + P+YA DS++ + G +++ +SV++CYEA VI F
Sbjct: 67 HLRSYTVPHEQRYIIRLLFIVPVYAFDSWL-SLLLLGGHQHYIYFDSVRDCYEAFVIYSF 125
Query: 89 LALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWTWQFVVI 148
L+L + YL ++ + EI+G+ + S R + L+ K T QF ++
Sbjct: 126 LSLCFQYLG---GESAIMAEIRGKPVRTSCFHGTCCLRGMTYSIGFLRFCKQATLQFCIV 182
Query: 149 RPVCSILMIALQLLGLYSNW---ISWTF---TIILNISVSLALYSLVIFYHVFAKELAPH 202
+P+ +++ I LQ G Y + + + T++ N SVSLALY+L +FY + L P
Sbjct: 183 KPIMALVTIVLQAFGKYHDGDFNVRSGYLYITLVYNASVSLALYALFLFYSATRELLQPF 242
Query: 203 KPLSKFLCIKGIVFFCFWQ 221
+P+ KFL IK ++F FWQ
Sbjct: 243 EPVLKFLTIKAVIFLSFWQ 261
>sp|Q810F5|T184C_RAT Transmembrane protein 184C OS=Rattus norvegicus GN=Tmem184c PE=2
SV=1
Length = 503
Score = 110 bits (274), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 121/218 (55%), Gaps = 13/218 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + ++LT S + +H + + +P+ QK II I+ M PIY++DS+V L
Sbjct: 52 AGIFLLLTIPVSMCGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWVAL----KYPKIA 107
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL I ++ E K ++ +H P+ P +
Sbjct: 108 IYVDTWRECYEAYVIYNFMIFLTNYLTIRFPNLMLHLEAKDQQ-NHLPPLCCCPPWA--M 164
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RP+ ++ + ++LG+Y +WT+ +ILN +S A
Sbjct: 165 GEMLLFRCKLGVLQYTVVRPITTVTSLVCEILGVYDEGNFSFSNAWTYLVILNNLSQLFA 224
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQV 222
+Y L++FY V +EL+P +P+ KFLC+K +VF FWQ
Sbjct: 225 MYCLLLFYKVLKEELSPIQPVGKFLCVKLVVFVSFWQA 262
>sp|Q5ZMP3|T184C_CHICK Transmembrane protein 184C OS=Gallus gallus GN=TMEM184C PE=2 SV=1
Length = 445
Score = 107 bits (268), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 118/217 (54%), Gaps = 13/217 (5%)
Query: 11 ATVCVMLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFF 70
A + +++T S + +H + + +P+ QK II I+ M PIY++DS++ L
Sbjct: 50 AGIFLLMTIPISLWGILQHLVHYTQPELQKPIIRILWMVPIYSLDSWIAL----KYPNIA 105
Query: 71 MFLESVKECYEALVIAKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARL 130
+++++ +ECYEA VI F+ L +YL ++ E K ++ H P P A +
Sbjct: 106 IYVDTCRECYEAYVIYNFMVFLSNYLTNRYPNLVLIIEAKDQQRH--LPPLCCCPSWA-M 162
Query: 131 NHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWI-----SWTFTIILN-ISVSLA 184
L K Q+ V+RP +I+ + +L+G+Y +WT+ +ILN +S A
Sbjct: 163 GEVLLFRCKLGVLQYTVVRPFTTIIALICELVGVYDEGNFSFDNAWTYLVILNNMSQLFA 222
Query: 185 LYSLVIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+Y LV+FY V +EL P +P+ KFLC+K +VF FWQ
Sbjct: 223 MYCLVLFYKVLREELNPIQPVGKFLCVKMVVFVSFWQ 259
>sp|Q75JN3|T1842_DICDI Transmembrane protein 184 homolog DDB_G0276041 OS=Dictyostelium
discoideum GN=tmem184B PE=3 SV=1
Length = 507
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 18/206 (8%)
Query: 25 LLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALV 84
L+ +HF+ + KP QK I+ II++APIYAI S + L F + + +F + ++CYEA V
Sbjct: 33 LILQHFIHYNKPNHQKYIVRIIMIAPIYAIHSLLSL--FFKRQFWALFFDISRDCYEAYV 90
Query: 85 IAKFLALLYSYLNISISKNIVPDEIKGREIHH-SFPMTLFQPRTARLNHHTLKLLKDWTW 143
+ F LL +L + + + + ++ ++P+ F T + + + L L
Sbjct: 91 LYCFFKLLICFLG---GEEALKELLSKKDTQPLTWPLGYFFSFTPKKSFYRLSL--GLVL 145
Query: 144 QFVVIRPVCSILMIALQ-----LLGLYSNWISWTF---TIILNISVSLALYSLVIFYHVF 195
Q+ +I+P +I+ L L G +S IS + T+I NISV +ALY LV+FY VF
Sbjct: 146 QYAIIKPTLAIVAAILYYNNKYLEGDFS--ISQGYLWITVINNISVLIALYFLVMFYEVF 203
Query: 196 AKELAPHKPLSKFLCIKGIVFFCFWQ 221
EL+PH P+ KFL IK +VFF FWQ
Sbjct: 204 QNELSPHSPILKFLVIKSVVFFLFWQ 229
>sp|Q09906|TM184_SCHPO Transmembrane protein 184 homolog C30D11.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC30D11.06c PE=1
SV=1
Length = 426
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%), Gaps = 33/218 (15%)
Query: 29 HFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLESVKECYEALVIAKF 88
H ++KKP Q++++ I++M IY+ S++ + + + F E +E YEA + F
Sbjct: 27 HLKNYKKPVLQRSVVRILMMIVIYSSVSFLSVYNEKIGSIF----EPFREIYEAFALYCF 82
Query: 89 LALLYSYLN------ISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNHHTLKLLKDWT 142
LL YL IS+ ++ + +P+ Q + +T +K
Sbjct: 83 FCLLIDYLGGERAAVISLHGHLPRPRL--------WPLNYLQDDIDLSDPYTFLSIKRGI 134
Query: 143 WQFVVIRPVCSILMIALQLLGLYSN-----------WISWTFTIILNISVSLALYSLVIF 191
Q+ ++P I ++ ++ G+Y WI ++ NIS++L+LYSL F
Sbjct: 135 LQYTWLKPFLVIAVLLTKVTGVYDREDQPVYASADLWIG----LVYNISITLSLYSLTTF 190
Query: 192 YHVFAKELAPHKPLSKFLCIKGIVFFCFWQVCNFKCSN 229
+ +ELAP +P KFL +K I+F +WQ +N
Sbjct: 191 WVCLHEELAPFRPFPKFLSVKAIIFASYWQQTVLSITN 228
>sp|P36142|TM184_YEAST Transmembrane protein 184 homolog YKR051W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YKR051W PE=1
SV=1
Length = 418
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 104/213 (48%), Gaps = 19/213 (8%)
Query: 16 MLTTHFSTQLLSEHFLSWKKPKEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLES 75
++ T S ++ H L+++KP EQ+ I I+L+ PI+++ G+I + ++ +++
Sbjct: 19 IIATIISFYTITRHLLNYRKPYEQRLSIRILLLVPIFSVSCASGIIKPEAAQ---FYVDP 75
Query: 76 VKECYEALVIAKFLALLYSYLNISISKNIVPD-EIKGREIHHSFPMTLFQPRTARLNHH- 133
++E YEA VI + + L + +NI+ + H P+ + L+
Sbjct: 76 IREFYEAFVI--YTFFTFLTLLLGGERNIITVLSLNHAPTRHPIPLIGKICKPIDLSDPF 133
Query: 134 TLKLLKDWTWQFVVIRP-VCSILMIALQLLGLYSNWISWTFTIILN----ISVSLALYSL 188
+K Q+V +P C +I S W F I LN ISV+ +LYSL
Sbjct: 134 DFLFVKKGILQYVWFKPFYCFGTLIC-------SAWKLPKFEIFLNVFYNISVTWSLYSL 186
Query: 189 VIFYHVFAKELAPHKPLSKFLCIKGIVFFCFWQ 221
+F+ EL P+KP KFLC+K I+F +WQ
Sbjct: 187 ALFWKCLYPELTPYKPWLKFLCVKLIIFASYWQ 219
>sp|A9ULC7|OSTA_XENTR Organic solute transporter subunit alpha OS=Xenopus tropicalis
GN=slc51a PE=2 SV=2
Length = 339
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 130 LNHHTLKLLKDWTWQFVVIRPVCSILMIALQLLGLY--SNWISWTFTIILNISVSL---- 183
+N TL +LK T+QF +RPV L + L G Y N + TI +NI V +
Sbjct: 156 INRKTLFILKLGTFQFAFLRPVLMFLAVVLWTNGTYMIGNSSAEKATIWINIGVGITTIT 215
Query: 184 ALYSLVIFYHVFAKELAPHKPLSKF 208
AL+++ I +++ L + KF
Sbjct: 216 ALWAVGIMFNLVKDNLKEKNIIGKF 240
>sp|Q6AXM5|CEPT1_RAT Choline/ethanolaminephosphotransferase 1 OS=Rattus norvegicus
GN=Cept1 PE=2 SV=1
Length = 416
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 122 LFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQ--LLGLYSNWISWTFTIILNI 179
LFQ T L+ H LK L++ +Q R + LM L+G +WI+ I+ +
Sbjct: 35 LFQLPTPPLSRHQLKRLEEHRYQ-SAGRSLLEPLMQGYWEWLVGRVPSWIAPNLITIIGL 93
Query: 180 SVSLALYSLVIFYHVFAKELAP 201
S+++ L++FY A E AP
Sbjct: 94 SINICTTILLVFYCPTATEQAP 115
>sp|Q8BGS7|CEPT1_MOUSE Choline/ethanolaminephosphotransferase 1 OS=Mus musculus GN=Cept1
PE=2 SV=1
Length = 416
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 122 LFQPRTARLNHHTLKLLKDWTWQFVVIRPVCSILMIALQ--LLGLYSNWISWTFTIILNI 179
LFQ T L+ H LK L++ +Q R + LM L+G +WI+ I+ +
Sbjct: 35 LFQLPTPPLSRHQLKRLEEHRYQ-SAGRSLLEPLMQGYWEWLVGRVPSWIAPNLITIIGL 93
Query: 180 SVSLALYSLVIFYHVFAKELAP 201
S+++ L++FY A E AP
Sbjct: 94 SINICTTILLVFYCPTATEQAP 115
>sp|Q895W4|META_CLOTE Homoserine O-succinyltransferase OS=Clostridium tetani (strain
Massachusetts / E88) GN=metA PE=3 SV=1
Length = 306
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 23/135 (17%)
Query: 19 THFSTQLLSEHFLSWKKP----KEQKAIIIIILMAPIYAIDSYVGLIDFQGSKAFFMFLE 74
TH S + +H LS+ K K +K +II AP+ I ++ + FQ K F
Sbjct: 74 THHSKNISEKHLLSFYKTIDDIKNEKFDGMIITGAPVEQI-AFEDVDYFQELKTIMDF-- 130
Query: 75 SVKECYEALVI--AKFLALLYSYLNISISKNIVPDEIKGREIHHSFPMTLFQPRTARLNH 132
SV + L I AL Y Y +I+KNI+P ++ G HH +N
Sbjct: 131 SVTNVFSTLHICWGAQAALYYHY---NINKNILPKKVFGVFSHH-----------ININK 176
Query: 133 HTLKLLKDWTWQFVV 147
T+KLL+ + +F V
Sbjct: 177 GTVKLLRGFDDKFYV 191
>sp|A4GAN3|YIDC_HERAR Membrane protein insertase YidC OS=Herminiimonas arsenicoxydans
GN=yidC PE=3 SV=1
Length = 569
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 136 KLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWISWTFTIILNISVSLALYSL 188
+L+KD+ W ++ +P+ ++M Q+LG NW WT I+L I + LA + L
Sbjct: 341 ELVKDYGWLTIIAKPIFWLMMQIHQILG---NW-GWTI-IVLTIVIKLAFFPL 388
>sp|A6T4D7|YIDC_JANMA Membrane protein insertase YidC OS=Janthinobacterium sp. (strain
Marseille) GN=yidC PE=3 SV=1
Length = 564
Score = 30.8 bits (68), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 136 KLLKDWTWQFVVIRPVCSILMIALQLLGLYSNWISWTFTIILNISVSLALYSL 188
+L+KD+ W ++ +P+ +++ QLLG NW WT ++L I + LA + L
Sbjct: 339 ELVKDYGWLTIIAKPIFWLMIQIHQLLG---NW-GWTI-VVLTIVIKLAFFPL 386
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.141 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,968,062
Number of Sequences: 539616
Number of extensions: 2957512
Number of successful extensions: 8451
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 8369
Number of HSP's gapped (non-prelim): 34
length of query: 235
length of database: 191,569,459
effective HSP length: 114
effective length of query: 121
effective length of database: 130,053,235
effective search space: 15736441435
effective search space used: 15736441435
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 59 (27.3 bits)