BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026645
(235 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255587056|ref|XP_002534117.1| endonuclease III, putative [Ricinus communis]
gi|223525829|gb|EEF28268.1| endonuclease III, putative [Ricinus communis]
Length = 357
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/226 (73%), Positives = 196/226 (86%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++G ++ S LP KERRFAVL+S+L+SS TKD V GA+QRL QN L TA+AIDKAD
Sbjct: 132 PVDTMGCEKAGSFLPSKERRFAVLVSSLMSSQTKDHVTHGAVQRLHQNSLLTADAIDKAD 191
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E TIKDLIYPV FYTRKA N+KKIAKICL KYDGDIP SL++LL+LPGIGPKMA++VM +
Sbjct: 192 ETTIKDLIYPVGFYTRKASNLKKIAKICLMKYDGDIPRSLEDLLSLPGIGPKMAHLVMNV 251
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGT+QKTS+PE+TR ALQ WLPKEEWV INPLLV
Sbjct: 252 AWDDVQGICVDTHVHRICNRLGWVSRPGTEQKTSNPEETRVALQLWLPKEEWVPINPLLV 311
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLR 231
GFGQTICTPLRPRCGMC+++E+CPSAFKE+S+ +SK KKS S R
Sbjct: 312 GFGQTICTPLRPRCGMCSITEFCPSAFKETSSPASKMKKSGLSRKR 357
>gi|356541151|ref|XP_003539044.1| PREDICTED: endonuclease III-like protein 1-like [Glycine max]
Length = 354
Score = 347 bits (890), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 160/210 (76%), Positives = 184/210 (87%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++G ++ +LPPKERRFAVL+S+LLSS TKD V GA+QRLLQN L TA+AI+ AD
Sbjct: 126 PVDTMGCEKAGETLPPKERRFAVLVSSLLSSQTKDPVTHGAIQRLLQNDLLTADAINDAD 185
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E TIK LIYPV FYTRKA N+KKIA ICL KYDGDIPSS+++LL LPGIGPKMA++VM +
Sbjct: 186 EETIKKLIYPVGFYTRKASNLKKIANICLMKYDGDIPSSIEQLLLLPGIGPKMAHLVMNV 245
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
GW NVQGICVDTHVHRICNRLGWV++ GTKQKTS+PE+TRE LQRWLPKEEWV INPLLV
Sbjct: 246 GWNNVQGICVDTHVHRICNRLGWVSRLGTKQKTSTPEETREELQRWLPKEEWVPINPLLV 305
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
GFGQTICTPLRPRCG C++SE CPSAFKE+
Sbjct: 306 GFGQTICTPLRPRCGECSISELCPSAFKET 335
>gi|21537257|gb|AAM61598.1| putative endonuclease [Arabidopsis thaliana]
Length = 379
Score = 342 bits (878), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 157/210 (74%), Positives = 183/210 (87%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G D+ S LPP ERRFAVLL ALLSS TKD+V + A+ RL QNGL T EA+DKAD
Sbjct: 154 PVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKAD 213
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA MKKIA+ICL KYDGDIPSSLD+LL+LPGIGPKMA++++ +
Sbjct: 214 ESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHI 273
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGTKQKT+SPE+TR ALQ+WLPKEEWV INPLLV
Sbjct: 274 AWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLV 333
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
GFGQ ICTPLRPRC C+VS+ CP+AFKE+
Sbjct: 334 GFGQMICTPLRPRCEACSVSKLCPAAFKET 363
>gi|11181952|emb|CAC16135.1| endonuclease III homologue [Arabidopsis thaliana]
Length = 354
Score = 342 bits (877), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 157/210 (74%), Positives = 183/210 (87%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G D+ S LPP ERRFAVLL ALLSS TKD+V + A+ RL QNGL T EA+DKAD
Sbjct: 129 PVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKAD 188
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA MKKIA+ICL KYDGDIPSSLD+LL+LPGIGPKMA++++ +
Sbjct: 189 ESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHI 248
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGTKQKT+SPE+TR ALQ+WLPKEEWV INPLLV
Sbjct: 249 AWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLV 308
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
GFGQ ICTPLRPRC C+VS+ CP+AFKE+
Sbjct: 309 GFGQMICTPLRPRCEACSVSKLCPAAFKET 338
>gi|145330326|ref|NP_001077988.1| endonuclease III [Arabidopsis thaliana]
gi|17380754|gb|AAL36207.1| putative endonuclease [Arabidopsis thaliana]
gi|20259623|gb|AAM14168.1| putative endonuclease [Arabidopsis thaliana]
gi|330253456|gb|AEC08550.1| endonuclease III [Arabidopsis thaliana]
Length = 377
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 156/210 (74%), Positives = 183/210 (87%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G D+ S LPP ERRFAVLL ALLSS TKD+V + A+ RL QNGL T EA+DKAD
Sbjct: 152 PVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKAD 211
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA MKKIA+ICL KYDGDIPSSLD+LL+LPGIGPKMA++++ +
Sbjct: 212 ESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHI 271
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGTKQKT+SPE+TR ALQ+WLPKEEWV INPLLV
Sbjct: 272 AWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLV 331
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
GFGQ ICTP+RPRC C+VS+ CP+AFKE+
Sbjct: 332 GFGQMICTPIRPRCEACSVSKLCPAAFKET 361
>gi|18402669|ref|NP_565725.1| endonuclease III [Arabidopsis thaliana]
gi|20198157|gb|AAD26474.2| putative endonuclease [Arabidopsis thaliana]
gi|330253455|gb|AEC08549.1| endonuclease III [Arabidopsis thaliana]
Length = 379
Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 156/210 (74%), Positives = 183/210 (87%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G D+ S LPP ERRFAVLL ALLSS TKD+V + A+ RL QNGL T EA+DKAD
Sbjct: 154 PVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNGLLTPEAVDKAD 213
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA MKKIA+ICL KYDGDIPSSLD+LL+LPGIGPKMA++++ +
Sbjct: 214 ESTIKELIYPVGFYTRKATYMKKIARICLVKYDGDIPSSLDDLLSLPGIGPKMAHLILHI 273
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGTKQKT+SPE+TR ALQ+WLPKEEWV INPLLV
Sbjct: 274 AWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLV 333
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
GFGQ ICTP+RPRC C+VS+ CP+AFKE+
Sbjct: 334 GFGQMICTPIRPRCEACSVSKLCPAAFKET 363
>gi|359478121|ref|XP_002264475.2| PREDICTED: endonuclease III-like protein 1-like [Vitis vinifera]
Length = 355
Score = 338 bits (868), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 169/219 (77%), Positives = 192/219 (87%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G ++ SSLPP+ERRFAVL+S+LLSS TKD V GA+QRLLQNGL A+AIDKAD
Sbjct: 130 PVDSMGCEKAGSSLPPRERRFAVLVSSLLSSQTKDNVTHGAIQRLLQNGLLVADAIDKAD 189
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
EAT+K LIYPV FY+RKA N+KKIAKICL KYDGDIPSSL+ELL LPGIGPKMA++VM +
Sbjct: 190 EATVKSLIYPVGFYSRKAGNLKKIAKICLMKYDGDIPSSLEELLLLPGIGPKMAHLVMNV 249
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W NVQGICVDTHVHRICNRLGWV++ GTKQKTS PE+TRE+LQ WLPKEEWV INPLLV
Sbjct: 250 AWNNVQGICVDTHVHRICNRLGWVSRRGTKQKTSLPEETRESLQLWLPKEEWVPINPLLV 309
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
GFGQTICTPLRPRCG+C VS+ CPSAFKE+ + SSK KK
Sbjct: 310 GFGQTICTPLRPRCGVCGVSDLCPSAFKEAQSPSSKMKK 348
>gi|297826589|ref|XP_002881177.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327016|gb|EFH57436.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 354
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 154/210 (73%), Positives = 183/210 (87%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G D+ S LPP ERRFAVLL ALLSS TKD+V + A+ RL QN L T EA+DKAD
Sbjct: 129 PVDSMGCDKAGSFLPPTERRFAVLLGALLSSQTKDQVNNAAIHRLHQNSLLTPEAVDKAD 188
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TI++LIYPV FYTRKA MKKIA+ICL KY+GDIPSSLD+LL+LPGIGPKMA++++ +
Sbjct: 189 ESTIRELIYPVGFYTRKATYMKKIARICLVKYNGDIPSSLDDLLSLPGIGPKMAHLILHI 248
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGTKQKT+SPE+TR ALQ+WLPKEEWV INPLLV
Sbjct: 249 AWNDVQGICVDTHVHRICNRLGWVSRPGTKQKTTSPEETRVALQQWLPKEEWVAINPLLV 308
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
GFGQTICTPLRPRC C+V++ CP+AFKE+
Sbjct: 309 GFGQTICTPLRPRCEACSVTKLCPAAFKET 338
>gi|297743769|emb|CBI36652.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 169/222 (76%), Positives = 192/222 (86%), Gaps = 3/222 (1%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADG---ALQRLLQNGLHTAEAID 62
PV S+G ++ SSLPP+ERRFAVL+S+LLSS TKD V G A+QRLLQNGL A+AID
Sbjct: 151 PVDSMGCEKAGSSLPPRERRFAVLVSSLLSSQTKDNVTHGNAGAIQRLLQNGLLVADAID 210
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
KADEAT+K LIYPV FY+RKA N+KKIAKICL KYDGDIPSSL+ELL LPGIGPKMA++V
Sbjct: 211 KADEATVKSLIYPVGFYSRKAGNLKKIAKICLMKYDGDIPSSLEELLLLPGIGPKMAHLV 270
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M + W NVQGICVDTHVHRICNRLGWV++ GTKQKTS PE+TRE+LQ WLPKEEWV INP
Sbjct: 271 MNVAWNNVQGICVDTHVHRICNRLGWVSRRGTKQKTSLPEETRESLQLWLPKEEWVPINP 330
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
LLVGFGQTICTPLRPRCG+C VS+ CPSAFKE+ + SSK KK
Sbjct: 331 LLVGFGQTICTPLRPRCGVCGVSDLCPSAFKEAQSPSSKMKK 372
>gi|297843388|ref|XP_002889575.1| hypothetical protein ARALYDRAFT_470604 [Arabidopsis lyrata subsp.
lyrata]
gi|297335417|gb|EFH65834.1| hypothetical protein ARALYDRAFT_470604 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/217 (70%), Positives = 183/217 (84%), Gaps = 2/217 (0%)
Query: 1 MKTLE--PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA 58
MK+ E P ++ D T S LPPKERRF VL+ LLSS TK+ + A++RL QNGL T
Sbjct: 152 MKSSEEAPANAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTP 211
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
EAIDKADE+TIK+LIYPV FYTRKA N+KK+AKICL KYDGDIP +L+ELL+LPG+GPK+
Sbjct: 212 EAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMKYDGDIPRTLEELLSLPGVGPKI 271
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A++V+ + W +VQGICVDTHVHRICNRLGWV++PGTKQKT SPE+TR ALQ+WLPKEEWV
Sbjct: 272 AHLVLHVAWNDVQGICVDTHVHRICNRLGWVSKPGTKQKTLSPEETRVALQQWLPKEEWV 331
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
IN LLVGFGQTICTPLRPRCG C+++E CPSAFKE+
Sbjct: 332 AINFLLVGFGQTICTPLRPRCGTCSITELCPSAFKET 368
>gi|356547306|ref|XP_003542056.1| PREDICTED: endonuclease III-like protein 1-like [Glycine max]
Length = 290
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 184/216 (85%)
Query: 13 DETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL 72
++ ++PPKERRFAVL S+LLSS TK+ V GA QRL +N L TA+A+DKADE TIK L
Sbjct: 72 EKAADTVPPKERRFAVLTSSLLSSQTKEHVTRGATQRLGENDLLTADAMDKADEETIKKL 131
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
IYPV FY RKA N+KKIA ICL KYDGDIPSS++ELL LPG+GPK+A++VM +GW NVQG
Sbjct: 132 IYPVGFYKRKASNLKKIANICLLKYDGDIPSSIEELLLLPGVGPKIAHLVMIVGWNNVQG 191
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
ICVDTHVHRICNRLGWV++PG+KQKT +PE+TR+ALQRWLPKEEWV IN LLVGFG+ IC
Sbjct: 192 ICVDTHVHRICNRLGWVSRPGSKQKTLTPEETRQALQRWLPKEEWVPINTLLVGFGRAIC 251
Query: 193 TPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESS 228
TPLRP CG C+V+ +CPSAFKE+S+ SSKSK+ S+
Sbjct: 252 TPLRPHCGDCSVNRFCPSAFKETSSLSSKSKRFTSN 287
>gi|42571353|ref|NP_973767.1| endonuclease III [Arabidopsis thaliana]
gi|222423369|dbj|BAH19657.1| AT1G05900 [Arabidopsis thaliana]
gi|332189795|gb|AEE27916.1| endonuclease III [Arabidopsis thaliana]
Length = 386
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 179/210 (85%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++ D T S LPPKERRF VL+ LLSS TK+ + A++RL QNGL T EAIDKAD
Sbjct: 161 PVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKAD 220
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA N+KK+AKICL +YDGDIP +L+ELL+LPG+GPK+A++V+ +
Sbjct: 221 ESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHV 280
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV++PGTKQKTSSPE+TR ALQ+WLPK EWV IN LLV
Sbjct: 281 AWNDVQGICVDTHVHRICNRLGWVSKPGTKQKTSSPEETRVALQQWLPKGEWVAINFLLV 340
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
GFGQTICTPLRP CG C+++E CPSAFKE+
Sbjct: 341 GFGQTICTPLRPHCGTCSITEICPSAFKET 370
>gi|224093156|ref|XP_002309812.1| predicted protein [Populus trichocarpa]
gi|222852715|gb|EEE90262.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 157/223 (70%), Positives = 181/223 (81%), Gaps = 17/223 (7%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++G ++ SLPP V+LSA GA+QRL QN L TA+AIDKAD
Sbjct: 154 PVDTMGCEKAGISLPP-----GVVLSA------------GAIQRLQQNNLLTADAIDKAD 196
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E IKDLIYPV FYTRKA N+KKIAKICL KYDGDIPSSL++LL+LPGIGPKMA++VM +
Sbjct: 197 ETAIKDLIYPVGFYTRKASNLKKIAKICLLKYDGDIPSSLEDLLSLPGIGPKMAHLVMNI 256
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W NVQGICVDTHVHRICNRLGWV +PGTKQKTS+PE+TREALQ WLPK+EWV INPLLV
Sbjct: 257 AWNNVQGICVDTHVHRICNRLGWVARPGTKQKTSTPEETREALQLWLPKDEWVPINPLLV 316
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESS 228
GFGQTICTPLRPRCGMC +SE+CPSAFKE+S+ +SK K+S S
Sbjct: 317 GFGQTICTPLRPRCGMCCISEFCPSAFKETSSPASKQKRSGGS 359
>gi|449468790|ref|XP_004152104.1| PREDICTED: endonuclease III-like protein 1-like [Cucumis sativus]
gi|449521044|ref|XP_004167541.1| PREDICTED: endonuclease III-like protein 1-like [Cucumis sativus]
Length = 386
Score = 324 bits (830), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 155/223 (69%), Positives = 182/223 (81%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++G S+LPPKERRFAVL S+LLSS TKD V GA RL ++GL TA+A+DKAD
Sbjct: 161 PVDTMGCGRAGSTLPPKERRFAVLASSLLSSQTKDHVTHGAALRLQESGLLTADAMDKAD 220
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E TIK LIYPV FY+ KA N+KKIA+ICL KY GDIP SL ELL LPGIGPK+A+++M +
Sbjct: 221 EETIKSLIYPVGFYSTKAKNLKKIARICLMKYGGDIPRSLAELLLLPGIGPKIAHLIMIM 280
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +VQGICVDTHVHRICNRLGWV+ G+KQKTS+PE+TR L+ WLPKEEWV INPLLV
Sbjct: 281 AWNDVQGICVDTHVHRICNRLGWVSGKGSKQKTSTPEETRVGLELWLPKEEWVPINPLLV 340
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESS 228
GFGQTICTPLRP+CG C+VS+ CPSAFKESS+ S K K S S+
Sbjct: 341 GFGQTICTPLRPKCGNCSVSDLCPSAFKESSSPSPKLKGSSST 383
>gi|357454433|ref|XP_003597497.1| Endonuclease III-like protein [Medicago truncatula]
gi|355486545|gb|AES67748.1| Endonuclease III-like protein [Medicago truncatula]
Length = 331
Score = 318 bits (816), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 158/231 (68%), Positives = 191/231 (82%), Gaps = 9/231 (3%)
Query: 7 VYSLGV--DETDSSL-PPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
+YS+ D D+ + PPK+RRFAVL S+LLSS TK+ V GA QRL QNGL TA+A++K
Sbjct: 101 MYSIDTTGDREDADIHPPKDRRFAVLASSLLSSQTKEHVTRGATQRLRQNGLLTADALNK 160
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
ADE TIK IYPV FY RKA N+KKIA ICLTKYDGDIP+S++ELL+LPG+GPK+A++VM
Sbjct: 161 ADEETIKKQIYPVGFYIRKAGNLKKIADICLTKYDGDIPNSIEELLSLPGVGPKIAHLVM 220
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
+ W NVQGICVDTHVHRI NRLGWV++PGTKQ+TS PE+TR+AL+RWLP+EEWV IN L
Sbjct: 221 IIAWNNVQGICVDTHVHRISNRLGWVSRPGTKQRTSIPEETRKALERWLPREEWVAINLL 280
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSK------SKKSESS 228
LVGFG+TICTPLRPRCG C VS +CPSAFKE+S+SSS+ +KK ESS
Sbjct: 281 LVGFGRTICTPLRPRCGECGVSRFCPSAFKETSSSSSRSNKSQLNKKPESS 331
>gi|6850320|gb|AAF29397.1|AC009999_17 Contains similarity to an endonuclease III homolog from Homo
sapiens gb|U81285, and contains an Endonuclease III
PF|00730 domain [Arabidopsis thaliana]
Length = 402
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/226 (65%), Positives = 179/226 (79%), Gaps = 16/226 (7%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++ D T S LPPKERRF VL+ LLSS TK+ + A++RL QNGL T EAIDKAD
Sbjct: 161 PVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKAD 220
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA N+KK+AKICL +YDGDIP +L+ELL+LPG+GPK+A++V+ +
Sbjct: 221 ESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHV 280
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTK----------------QKTSSPEQTREALQ 169
W +VQGICVDTHVHRICNRLGWV++PGTK QKTSSPE+TR ALQ
Sbjct: 281 AWNDVQGICVDTHVHRICNRLGWVSKPGTKQFAYLLLVTYLYFVLDQKTSSPEETRVALQ 340
Query: 170 RWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
+WLPK EWV IN LLVGFGQTICTPLRP CG C+++E CPSAFKE+
Sbjct: 341 QWLPKGEWVAINFLLVGFGQTICTPLRPHCGTCSITEICPSAFKET 386
>gi|108864224|gb|ABA92590.2| Endonuclease III-like protein 1, putative, expressed [Oryza sativa
Japonica Group]
Length = 362
Score = 300 bits (768), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 139/223 (62%), Positives = 176/223 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL + GL +AI + D
Sbjct: 140 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSEKGLLDPDAIVRTD 199
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
EAT+ +LI PV FY RKA +K+ +KICL ++ GDIP SL+ELLAL G+GPKMA++VM++
Sbjct: 200 EATLANLIKPVGFYQRKAKFIKEASKICLERFGGDIPDSLNELLALKGVGPKMAHLVMSI 259
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GTKQKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 260 AWKNTQGICVDTHVHRISNRLGWVFREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLV 319
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESS 228
GFGQTICTPLRP+C MC ++ CPSAFKESS+ + K KK SS
Sbjct: 320 GFGQTICTPLRPKCDMCGINNICPSAFKESSSPNPKQKKMRSS 362
>gi|62734175|gb|AAX96284.1| endonuclease III homologue [Oryza sativa Japonica Group]
gi|62734224|gb|AAX96333.1| endonuclease III homologue [Oryza sativa Japonica Group]
gi|218185559|gb|EEC67986.1| hypothetical protein OsI_35754 [Oryza sativa Indica Group]
gi|222615819|gb|EEE51951.1| hypothetical protein OsJ_33589 [Oryza sativa Japonica Group]
Length = 373
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 137/219 (62%), Positives = 174/219 (79%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL + GL +AI + D
Sbjct: 140 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSEKGLLDPDAIVRTD 199
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
EAT+ +LI PV FY RKA +K+ +KICL ++ GDIP SL+ELLAL G+GPKMA++VM++
Sbjct: 200 EATLANLIKPVGFYQRKAKFIKEASKICLERFGGDIPDSLNELLALKGVGPKMAHLVMSI 259
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GTKQKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 260 AWKNTQGICVDTHVHRISNRLGWVFREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLV 319
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
GFGQTICTPLRP+C MC ++ CPSAFKESS+ + K KK
Sbjct: 320 GFGQTICTPLRPKCDMCGINNICPSAFKESSSPNPKQKK 358
>gi|242084784|ref|XP_002442817.1| hypothetical protein SORBIDRAFT_08g003320 [Sorghum bicolor]
gi|241943510|gb|EES16655.1| hypothetical protein SORBIDRAFT_08g003320 [Sorghum bicolor]
Length = 367
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 137/222 (61%), Positives = 175/222 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL +NGL +AI + D
Sbjct: 145 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTD 204
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E T+ +LI PV FY RKA +K+ +KICL ++ GDIP SL+ELLAL G+GPKMA++VM++
Sbjct: 205 ETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSI 264
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GTKQKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 265 AWKNTQGICVDTHVHRISNRLGWVFREGTKQKTTTPEQTRISLEKWLPKDEWEPINPLLV 324
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
GFGQTICTPLRP+C C ++ CPSAFKESS+ + K KK+ S
Sbjct: 325 GFGQTICTPLRPKCDNCGINNLCPSAFKESSSPNPKQKKTRS 366
>gi|226499382|ref|NP_001151454.1| endonuclease III-like protein 1 [Zea mays]
gi|195646916|gb|ACG42926.1| endonuclease III-like protein 1 [Zea mays]
Length = 364
Score = 294 bits (753), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 174/222 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL +NGL +AI + D
Sbjct: 142 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTD 201
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E T+ +LI PV FY RKA +K+ +KICL ++ GDIP SL+ELLAL G+GPKMA++VM++
Sbjct: 202 ETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSI 261
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GT+QKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 262 AWKNTQGICVDTHVHRISNRLGWVFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLV 321
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
GFGQTICTPLRP+C C ++ CPSAFKESS+ K KK+ S
Sbjct: 322 GFGQTICTPLRPKCDKCGINNLCPSAFKESSSPIPKQKKTRS 363
>gi|194697286|gb|ACF82727.1| unknown [Zea mays]
Length = 352
Score = 294 bits (752), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 174/222 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL +NGL +AI + D
Sbjct: 130 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTD 189
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E T+ +LI PV FY RKA +K+ +KICL ++ GDIP SL+ELLAL G+GPKMA++VM++
Sbjct: 190 ETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSI 249
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GT+QKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 250 AWKNTQGICVDTHVHRISNRLGWVFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLV 309
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
GFGQTICTPLRP+C C ++ CPSAFKESS+ K KK+ S
Sbjct: 310 GFGQTICTPLRPKCDKCGINNICPSAFKESSSPIPKQKKTRS 351
>gi|413916132|gb|AFW56064.1| endonuclease III-like protein 1 [Zea mays]
Length = 287
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 174/222 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL +NGL +AI + D
Sbjct: 65 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTD 124
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E T+ +LI PV FY RKA +K+ +KICL ++ GDIP SL+ELLAL G+GPKMA++VM++
Sbjct: 125 ETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSI 184
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GT+QKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 185 AWKNTQGICVDTHVHRISNRLGWVFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLV 244
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
GFGQTICTPLRP+C C ++ CPSAFKESS+ K KK+ S
Sbjct: 245 GFGQTICTPLRPKCDKCGINNICPSAFKESSSPIPKQKKTRS 286
>gi|413916131|gb|AFW56063.1| hypothetical protein ZEAMMB73_227959 [Zea mays]
Length = 291
Score = 292 bits (747), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 136/222 (61%), Positives = 174/222 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL +NGL +AI + D
Sbjct: 69 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTD 128
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E T+ +LI PV FY RKA +K+ +KICL ++ GDIP SL+ELLAL G+GPKMA++VM++
Sbjct: 129 ETTLANLIKPVGFYQRKAQFIKEASKICLERFGGDIPDSLNELLALRGVGPKMAHLVMSI 188
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GT+QKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 189 AWKNTQGICVDTHVHRISNRLGWVFREGTRQKTTTPEQTRISLEKWLPKDEWEPINPLLV 248
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
GFGQTICTPLRP+C C ++ CPSAFKESS+ K KK+ S
Sbjct: 249 GFGQTICTPLRPKCDKCGINNICPSAFKESSSPIPKQKKTRS 290
>gi|357156910|ref|XP_003577617.1| PREDICTED: endonuclease III-like protein 1-like isoform 1
[Brachypodium distachyon]
Length = 370
Score = 289 bits (739), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 171/219 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL +NGL +AI + D
Sbjct: 146 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTD 205
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E T+ +LI PV FY RKA +K+ +K+CL ++ GDIP SL ELLAL G+GPKMA++VM++
Sbjct: 206 ETTLANLIKPVGFYQRKAQFIKEASKVCLKRFGGDIPDSLTELLALKGVGPKMAHLVMSI 265
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GTKQKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 266 AWKNTQGICVDTHVHRISNRLGWVYREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLV 325
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
GFGQTICTPLRP+C C ++ CPSAFKE S+ + K KK
Sbjct: 326 GFGQTICTPLRPKCVNCGINTLCPSAFKEPSSPNPKQKK 364
>gi|357156913|ref|XP_003577618.1| PREDICTED: endonuclease III-like protein 1-like isoform 2
[Brachypodium distachyon]
Length = 359
Score = 289 bits (739), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 134/219 (61%), Positives = 171/219 (78%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV + G ++ S LPPKERRFAVL+S ++SS TKD+V A++RL +NGL +AI + D
Sbjct: 135 PVDTKGCEKAGSLLPPKERRFAVLISTMMSSQTKDEVTHAAVERLSENGLLDPDAIVRTD 194
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E T+ +LI PV FY RKA +K+ +K+CL ++ GDIP SL ELLAL G+GPKMA++VM++
Sbjct: 195 ETTLANLIKPVGFYQRKAQFIKEASKVCLKRFGGDIPDSLTELLALKGVGPKMAHLVMSI 254
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W N QGICVDTHVHRI NRLGWV + GTKQKT++PEQTR +L++WLPK+EW INPLLV
Sbjct: 255 AWKNTQGICVDTHVHRISNRLGWVYREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLV 314
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
GFGQTICTPLRP+C C ++ CPSAFKE S+ + K KK
Sbjct: 315 GFGQTICTPLRPKCVNCGINTLCPSAFKEPSSPNPKQKK 353
>gi|302801191|ref|XP_002982352.1| hypothetical protein SELMODRAFT_116252 [Selaginella moellendorffii]
gi|300149944|gb|EFJ16597.1| hypothetical protein SELMODRAFT_116252 [Selaginella moellendorffii]
Length = 240
Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/218 (62%), Positives = 167/218 (76%), Gaps = 4/218 (1%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G ++ SLPPKERR AVL+SALLSS TKD+V GA++RL + L + E + KA+
Sbjct: 23 PVDSMGCEKAGISLPPKERRVAVLISALLSSQTKDEVNHGAMKRLSERHLLSMEDLSKAE 82
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TI+D IYPV FY RKA +KK+A +CL KY GDIP +L ELLALPGIGPKMA++VM +
Sbjct: 83 ESTIRDAIYPVGFYARKASYLKKVAALCLEKYQGDIPKTLSELLALPGIGPKMAHLVMNV 142
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQK----TSSPEQTREALQRWLPKEEWVRIN 181
GW +V GICVDTHVHRI NRL WV+ P + K T +PE+TR +L+ WLP+EEWV IN
Sbjct: 143 GWESVHGICVDTHVHRITNRLEWVSHPKSTSKKRLDTKTPEETRISLESWLPREEWVPIN 202
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSS 219
PLLVGFGQTICTPLRPRCG C +S CP+AFK + S
Sbjct: 203 PLLVGFGQTICTPLRPRCGDCLISNLCPAAFKHKGSKS 240
>gi|302766179|ref|XP_002966510.1| hypothetical protein SELMODRAFT_85281 [Selaginella moellendorffii]
gi|300165930|gb|EFJ32537.1| hypothetical protein SELMODRAFT_85281 [Selaginella moellendorffii]
Length = 240
Score = 285 bits (730), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 135/218 (61%), Positives = 166/218 (76%), Gaps = 4/218 (1%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV S+G ++ SLPPKERR AVL+SALLSS TKD+V GA++RL + L + E + KA+
Sbjct: 23 PVDSMGCEKAGISLPPKERRVAVLISALLSSQTKDEVNHGAMKRLSERHLLSMEDLSKAE 82
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TI+D IYPV FY RKA +KK+A +CL KY GDIP +L ELLALPGIGPKMA++VM +
Sbjct: 83 ESTIRDAIYPVGFYARKASYLKKVAALCLEKYQGDIPKTLSELLALPGIGPKMAHLVMNV 142
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQK----TSSPEQTREALQRWLPKEEWVRIN 181
GW +V GICVDTHVHRI NRL WV+ P + K T +PE+TR +L+ WLP+EEWV IN
Sbjct: 143 GWESVHGICVDTHVHRITNRLEWVSHPKSTSKKRLDTKTPEETRISLESWLPREEWVPIN 202
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSS 219
PLLVGFGQTICTPLRPRCG C +S CP+A K + S
Sbjct: 203 PLLVGFGQTICTPLRPRCGDCLISNLCPAALKHKGSKS 240
>gi|147805787|emb|CAN69482.1| hypothetical protein VITISV_017352 [Vitis vinifera]
Length = 377
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/248 (62%), Positives = 178/248 (71%), Gaps = 36/248 (14%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSA-----------------------------LLSS 36
PV S+G ++ SSLPP RR L +A +L+
Sbjct: 130 PVDSMGCEKAGSSLPP--RRLHTLNTAHYKYYQQLNTRQWVMGTKAACAPFAYVKKVLAX 187
Query: 37 LTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTK 96
+ + GA+QRLLQNGL A+AIDKADEATIK LIYPV FY+RKA N+KKIAKICL K
Sbjct: 188 ILLSTRSAGAIQRLLQNGLLVADAIDKADEATIKSLIYPVGFYSRKAANLKKIAKICLMK 247
Query: 97 YDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQ 156
YDGDIPSSL+ELL LPGIGPKMA++VM + W NVQGICVDTHVHRICNRLGWV++ GTKQ
Sbjct: 248 YDGDIPSSLEELLLLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRICNRLGWVSRRGTKQ 307
Query: 157 KTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESS 216
KTSSPE+TRE+LQ WLPKEEWV INPLL TICTPLRP CG+C VS+ CPSAFKE+
Sbjct: 308 KTSSPEETRESLQLWLPKEEWVPINPLL-----TICTPLRPXCGVCGVSDLCPSAFKEAQ 362
Query: 217 TSSSKSKK 224
+ SSK KK
Sbjct: 363 SPSSKMKK 370
>gi|18390586|ref|NP_563752.1| endonuclease III [Arabidopsis thaliana]
gi|15294154|gb|AAK95254.1|AF410268_1 At1g05900/T20M3_15 [Arabidopsis thaliana]
gi|23505879|gb|AAN28799.1| At1g05900/T20M3_15 [Arabidopsis thaliana]
gi|332189794|gb|AEE27915.1| endonuclease III [Arabidopsis thaliana]
Length = 314
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 103/151 (68%), Positives = 127/151 (84%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++ D T S LPPKERRF VL+ LLSS TK+ + A++RL QNGL T EAIDKAD
Sbjct: 161 PVNAVECDRTGSFLPPKERRFYVLIGTLLSSQTKEHITGAAVERLHQNGLLTPEAIDKAD 220
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+TIK+LIYPV FYTRKA N+KK+AKICL +YDGDIP +L+ELL+LPG+GPK+A++V+ +
Sbjct: 221 ESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTLEELLSLPGVGPKIAHLVLHV 280
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQ 156
W +VQGICVDTHVHRICNRLGWV++PGTKQ
Sbjct: 281 AWNDVQGICVDTHVHRICNRLGWVSKPGTKQ 311
>gi|380790641|gb|AFE67196.1| endonuclease III-like protein 1 [Macaca mulatta]
Length = 312
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 141/207 (68%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAQGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNQALCPAA 309
>gi|355709857|gb|EHH31321.1| Endonuclease III-like protein 1, partial [Macaca mulatta]
Length = 280
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 141/207 (68%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 77 PVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAQGL-TVDSILQT 135
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 136 DDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 195
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 196 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 250
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 251 VGFGQQTCLPVRPRCQACLNQALCPAA 277
>gi|402907295|ref|XP_003916412.1| PREDICTED: endonuclease III-like protein 1 [Papio anubis]
Length = 312
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 141/207 (68%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAQGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNQALCPAA 309
>gi|109127234|ref|XP_001082772.1| PREDICTED: nth endonuclease III-like 1 [Macaca mulatta]
Length = 312
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 141/207 (68%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAQGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNQALCPAA 309
>gi|383413091|gb|AFH29759.1| endonuclease III-like protein 1 [Macaca mulatta]
Length = 312
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 141/207 (68%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAQGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNQALCPAA 309
>gi|332240056|ref|XP_003269206.1| PREDICTED: endonuclease III-like protein 1 [Nomascus leucogenys]
Length = 312
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 142/207 (68%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRIKVKYIKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W +V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGSVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRVALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNQALCPAA 309
>gi|330812778|ref|XP_003291295.1| hypothetical protein DICPUDRAFT_155881 [Dictyostelium purpureum]
gi|325078545|gb|EGC32191.1| hypothetical protein DICPUDRAFT_155881 [Dictyostelium purpureum]
Length = 710
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 144/214 (67%), Gaps = 9/214 (4%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+ + PV +LG + + + PKERRF +L+ LLSS TKD+V A+ RL + GL+ E
Sbjct: 489 ENIAPVDTLGAESFNIEEIEPKERRFHILVGCLLSSQTKDQVTHAAMVRLKEYGLN-VET 547
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ K ++ LI+PV FY RKA +K IA+I KY+GDIP + E+ ALPGIGPKM N
Sbjct: 548 VLKTPNEKLETLIHPVGFYRRKAVYLKSIAEILKEKYNGDIPPTFKEIEALPGIGPKMTN 607
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+++ + W V+GI VD H+HRICNRLGWV KT++PE+T L+ WLP+E+W ++
Sbjct: 608 LIVQIAWGRVEGIAVDVHMHRICNRLGWV-------KTNTPEETMRQLESWLPREKWGQV 660
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
N LLVGFGQTIC P+RP+C CTV+ CP KE
Sbjct: 661 NHLLVGFGQTICDPVRPKCSSCTVNNLCPVGIKE 694
>gi|297697807|ref|XP_002826033.1| PREDICTED: endonuclease III-like protein 1 [Pongo abelii]
Length = 312
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 140/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNQALCPAA 309
>gi|426380776|ref|XP_004057037.1| PREDICTED: endonuclease III-like protein 1 [Gorilla gorilla
gorilla]
Length = 312
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 140/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCHACLNQALCPAA 309
>gi|330812766|ref|XP_003291289.1| hypothetical protein DICPUDRAFT_8477 [Dictyostelium purpureum]
gi|325078539|gb|EGC32185.1| hypothetical protein DICPUDRAFT_8477 [Dictyostelium purpureum]
Length = 235
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 144/214 (67%), Gaps = 9/214 (4%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+ + PV +LG + + + PKERRF +L+ LLSS TKD+V A+ RL + GL+ E
Sbjct: 14 ENIAPVDTLGAESFNIEEIEPKERRFHILVGCLLSSQTKDQVTHAAMVRLKEYGLN-VET 72
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ K ++ LI+PV FY RKA +K IA+I KY+GDIP + E+ ALPGIGPKM N
Sbjct: 73 VLKTPNEKLETLIHPVGFYRRKAVYLKSIAEILKEKYNGDIPPTFKEIEALPGIGPKMTN 132
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+++ + W V+GI VD H+HRICNRLGWV KT++PE+T L+ WLP+E+W ++
Sbjct: 133 LIVQIAWGRVEGIAVDVHMHRICNRLGWV-------KTNTPEETMRQLESWLPREKWGQV 185
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
N LLVGFGQTIC P+RP+C CTV+ CP KE
Sbjct: 186 NHLLVGFGQTICDPVRPKCSSCTVNNLCPVGIKE 219
>gi|417398676|gb|JAA46371.1| Putative endonuclease iii [Desmodus rotundus]
Length = 305
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D PPK RR+ VLLS +LSS TKD+V GA++RL GL T ++I +
Sbjct: 102 PVDQLGAEHCYDPGAPPKVRRYQVLLSLMLSSQTKDQVTAGAMKRLQARGL-TVDSILQT 160
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 161 DDITLGRLIYPVGFWRNKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 220
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW TK+KT SPE+TR AL+ WLP++ W IN LL
Sbjct: 221 VAWGTVSGIAVDTHVHRIANRLGW-----TKKKTKSPEETRAALEEWLPRDLWSEINGLL 275
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+RPRC C CP+A
Sbjct: 276 VGFGQQICLPVRPRCQACLNQALCPAA 302
>gi|194219367|ref|XP_001915373.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein
1-like [Equus caballus]
Length = 312
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 140/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +YDGDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDSTLGMLIYPVGFWRNKVKYIKQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKTTKSPEETRTALEEWLPRELWREINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNRALCPAA 309
>gi|397472431|ref|XP_003807747.1| PREDICTED: endonuclease III-like protein 1 [Pan paniscus]
Length = 312
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCHTCLNQALCPAA 309
>gi|395835757|ref|XP_003790839.1| PREDICTED: endonuclease III-like protein 1 [Otolemur garnettii]
Length = 312
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 140/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDQLGAEHCYDPCAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ +LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDSTLGELIYPVGFWRNKVKYIKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+GW V GI VDTHVHRI NRLGW TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VGWGIVSGIAVDTHVHRIANRLGW-----TKKATKSPEETRGALEEWLPRELWSEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C PL PRC C CP+A
Sbjct: 283 VGFGQQTCLPLHPRCPTCLNYALCPAA 309
>gi|114051958|ref|NP_001039862.1| endonuclease III-like protein 1 [Bos taurus]
gi|109892805|sp|Q2KID2.1|NTHL1_BOVIN RecName: Full=Endonuclease III-like protein 1
gi|86826431|gb|AAI12682.1| Nth endonuclease III-like 1 (E. coli) [Bos taurus]
gi|296473490|tpg|DAA15605.1| TPA: nth endonuclease III-like 1 [Bos taurus]
Length = 305
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 102 PVDQLGAEHCFDPSASPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 160
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +YDGDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 161 DDSTLGALIYPVGFWRSKVKYIKQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMA 220
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 221 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRRALEEWLPRELWSEINGLL 275
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 276 VGFGQQTCLPIRPRCQACLNRALCPAA 302
>gi|440913510|gb|ELR62959.1| Endonuclease III-like protein 1, partial [Bos grunniens mutus]
Length = 316
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 113 PVDQLGAEHCFDPSASPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 171
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +YDGDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 172 DDSTLGALIYPVGFWRSKVKYIKQTSAILQQRYDGDIPASVAELVALPGVGPKMAHLAMA 231
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 232 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRRALEEWLPRELWSEINGLL 286
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 287 VGFGQQTCLPIRPRCQACLNRALCPAA 313
>gi|403273321|ref|XP_003928467.1| PREDICTED: endonuclease III-like protein 1 [Saimiri boliviensis
boliviensis]
Length = 304
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 101 PVDHLGVEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAQGL-TVDSILQT 159
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 160 DDTTLGKLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPASVAELMALPGVGPKMAHLAMA 219
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 220 VAWGTVSGIAVDTHVHRITNRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 274
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 275 VGFGQQTCLPVHPRCQGCLNQALCPAA 301
>gi|432102524|gb|ELK30095.1| Endonuclease III-like protein 1 [Myotis davidii]
Length = 312
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 140/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S+PPK +R+ VLLS +LSS TKD+V GA++RL GL T + I K
Sbjct: 109 PVDQLGAEHCYDHSVPPKVQRYQVLLSLMLSSQTKDQVTAGAMERLRARGL-TVDNILKT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I YDGDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDSTLGALIYPVGFWRSKVKYIKQTSAILQQNYDGDIPASVTELMALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP++ W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKVTKSPEETRAALEDWLPRDLWSEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+RPRC C CP+A
Sbjct: 283 VGFGQQICLPVRPRCQTCLNQALCPAA 309
>gi|303272029|ref|XP_003055376.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463350|gb|EEH60628.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 298
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 144/231 (62%), Gaps = 8/231 (3%)
Query: 6 PVYSLGVDETDSSLPPKER--RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
PV ++G ++ P +R RF L+SA+LSS TKD + A RL+++G T E I
Sbjct: 65 PVDTMGCEKISEDAAPDDRGRRFVTLVSAMLSSQTKDPITHAATARLVKHGC-TPENIAA 123
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
+ +I PV F+ RK ++ A+ C+ ++ GDIPS +D L+ALPG+GPKMA +VM
Sbjct: 124 TSAEDLAAIIRPVGFHARKGQYLRDAARACVERHGGDIPSDVDGLMALPGVGPKMAYLVM 183
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWV-----TQPGTKQKTSSPEQTREALQRWLPKEEWV 178
+GW GICVD HVHRI RLGWV T GT +K +PE TREAL+ WLP+EEW+
Sbjct: 184 NVGWGVPSGICVDVHVHRIAERLGWVPSVAFTSNGTPRKNRTPEDTREALEAWLPREEWI 243
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSS 229
INPLLVG GQ C P P+CG C + CPSAFK+ +K ++ +++
Sbjct: 244 EINPLLVGHGQLTCAPKAPKCGECAANAMCPSAFKDEEARRAKKEEKNAAA 294
>gi|4505471|ref|NP_002519.1| endonuclease III-like protein 1 [Homo sapiens]
gi|29840795|sp|P78549.2|NTHL1_HUMAN RecName: Full=Endonuclease III-like protein 1
gi|20136744|gb|AAM11786.1|AF498098_1 nth endonuclease III-like 1 (E. coli) [Homo sapiens]
gi|3522921|gb|AAC34209.1| hNTH1 [Homo sapiens]
gi|119605968|gb|EAW85562.1| nth endonuclease III-like 1 (E. coli) [Homo sapiens]
gi|261860536|dbj|BAI46790.1| nth endonuclease III-like protein 1 [synthetic construct]
gi|311350018|gb|ADP92214.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350020|gb|ADP92215.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350022|gb|ADP92216.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350024|gb|ADP92217.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350026|gb|ADP92218.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350028|gb|ADP92219.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350030|gb|ADP92220.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350032|gb|ADP92221.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350034|gb|ADP92222.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350036|gb|ADP92223.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350038|gb|ADP92224.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350040|gb|ADP92225.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350042|gb|ADP92226.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350044|gb|ADP92227.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350046|gb|ADP92228.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350048|gb|ADP92229.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350050|gb|ADP92230.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350052|gb|ADP92231.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350054|gb|ADP92232.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350056|gb|ADP92233.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350058|gb|ADP92234.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350060|gb|ADP92235.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350062|gb|ADP92236.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350064|gb|ADP92237.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350066|gb|ADP92238.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350068|gb|ADP92239.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350070|gb|ADP92240.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350072|gb|ADP92241.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350074|gb|ADP92242.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350076|gb|ADP92243.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350078|gb|ADP92244.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350080|gb|ADP92245.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350082|gb|ADP92246.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350084|gb|ADP92247.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350086|gb|ADP92248.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350088|gb|ADP92249.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350090|gb|ADP92250.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350092|gb|ADP92251.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350094|gb|ADP92252.1| endonuclease III-like protein 1 [Homo sapiens]
gi|311350096|gb|ADP92253.1| endonuclease III-like protein 1 [Homo sapiens]
Length = 312
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 109 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 283 VGFGQQTCLPVHPRCHACLNQALCPAA 309
>gi|1772974|emb|CAA70865.1| endonuclease III homologue 1 [Homo sapiens]
Length = 303
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 100 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 158
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 159 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 218
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 219 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 273
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 274 VGFGQQTCLPVHPRCHACLNQALCPAA 300
>gi|1753174|gb|AAC51136.1| endonuclease III [Homo sapiens]
gi|1881376|dbj|BAA19413.1| endonuclease III homolog [Homo sapiens]
gi|3550834|dbj|BAA32695.1| NTHL1/NTH1 [Homo sapiens]
gi|12804311|gb|AAH03014.1| NTHL1 protein [Homo sapiens]
Length = 304
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 101 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 159
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 160 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 219
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 220 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 274
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 275 VGFGQQTCLPVHPRCHACLNQALCPAA 301
>gi|38197140|gb|AAH00391.2| NTHL1 protein, partial [Homo sapiens]
Length = 305
Score = 219 bits (559), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 102 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 160
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 161 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 220
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 221 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 275
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 276 VGFGQQTCLPVHPRCHACLNQALCPAA 302
>gi|410985533|ref|XP_003999075.1| PREDICTED: endonuclease III-like protein 1 [Felis catus]
Length = 323
Score = 219 bits (558), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ DS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 120 PVDWLGVEHCYDSDAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 178
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +Y GDIP S+ EL+ALPG+GPKMA++ M
Sbjct: 179 DDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPDSVAELVALPGVGPKMAHLAMA 238
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW TK T+SPE+TR AL+ WLP+E W IN LL
Sbjct: 239 VAWGTVSGIAVDTHVHRIANRLGW-----TKTATNSPEKTRAALEEWLPRELWGEINGLL 293
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 294 VGFGQQTCLPVHPRCQGCLNRTLCPAA 320
>gi|348584800|ref|XP_003478160.1| PREDICTED: endonuclease III-like protein 1-like [Cavia porcellus]
Length = 309
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK +R+ +LL+ +LSS TKD+V GA+QRLL GL T ++I +
Sbjct: 106 PVDHLGAEHCCDPSAPPKVQRYQILLALMLSSQTKDQVTAGAMQRLLAQGL-TVDSILQT 164
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ + I +Y+GDIP+SL EL+ALPG+GPKMA++ M
Sbjct: 165 DDNTLGKLIYPVGFWRSKVKFIKQTSAILKQRYNGDIPASLAELVALPGVGPKMAHLAMA 224
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP++ W IN LL
Sbjct: 225 VAWGTVSGIAVDTHVHRIANRLKW-----TKRMTKSPEETRAALEEWLPRQLWSEINGLL 279
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P PRC C CPSA
Sbjct: 280 VGFGQQICLPTHPRCQTCLNQALCPSA 306
>gi|412985508|emb|CCO18954.1| predicted protein [Bathycoccus prasinos]
Length = 335
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 145/220 (65%), Gaps = 7/220 (3%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
L PV ++G ++ + K++R+ L+SA+LSS TKD++ + +L+ TAE I
Sbjct: 104 LAPVDTMGCEKIAETSDEKQKRYRTLISAMLSSQTKDQINHATMNKLIALNKDTAEGILN 163
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
E + ++I+ V F+ KA ++ AKIC+ KY GDIP L+ L+ LPG+GPKM +++M
Sbjct: 164 TTEDDLDEIIHQVGFHRNKAKYLRAAAKICVEKYGGDIPPDLESLVELPGVGPKMGHLIM 223
Query: 124 TLGWFNVQGICVDTHVHRICNRLGW------VTQPGTKQKTSSPEQTREALQRWLPKEEW 177
+GW GICVD HVHRI RLGW VT G+ +K +PE TR AL+ WLPK+EW
Sbjct: 224 NVGWEKPSGICVDVHVHRITERLGWVSESCAVTNAGSPRK-RTPEDTRVALENWLPKDEW 282
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESST 217
V INPLLVGFGQ CTPLRP+C C V++ C +AF++++T
Sbjct: 283 VEINPLLVGFGQLYCTPLRPKCSECDVADLCQNAFRDAAT 322
>gi|1800271|gb|AAB41534.1| endonuclease III homolog 1, hNTH1 [Homo sapiens]
Length = 312
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 137/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL ++I +
Sbjct: 109 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAIQRLRARGL-AVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEETRAALEEWLPRELWHEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C CP+A
Sbjct: 283 VGFGQQTCLPVHPRCHACLNQALCPAA 309
>gi|351711290|gb|EHB14209.1| Endonuclease III-like protein 1 [Heterocephalus glaber]
Length = 298
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 137/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK +R+ VLL+ +LSS TKD+V GA+QRL GL T I +
Sbjct: 95 PVDQLGAEHCCDPSAPPKVQRYQVLLALMLSSQTKDQVTAGAMQRLRAQGL-TVNRILQT 153
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ + I +YDGDIP+SL EL+ALPG+GPKMA++ M
Sbjct: 154 DDNTLGKLIYPVGFWRSKVKFIKQTSAILQQRYDGDIPASLAELVALPGVGPKMAHLAMA 213
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W T++ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 214 VAWGTVSGIAVDTHVHRIANRLRW-----TRRMTKSPEETRAALEEWLPRELWHEINGLL 268
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 269 VGFGQQICLPIHPRCQACLNQALCPAA 295
>gi|145356922|ref|XP_001422672.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582915|gb|ABP00989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 273
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 144/215 (66%), Gaps = 7/215 (3%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K RR+ L SA+LSS T+D++ A+ RL +G T E + DE + ++ PV F+ R
Sbjct: 56 KYRRYLTLTSAMLSSQTRDEINHAAMARLRAHGC-TPENVLNTDEDALDAMLNPVGFHRR 114
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
KA ++ AKI L +YDGDIPSS++ L ALPG+GPKMA +VM +GW GICVD HVHR
Sbjct: 115 KAQYLRATAKILLDEYDGDIPSSVETLCALPGVGPKMAYLVMNVGWQKPTGICVDVHVHR 174
Query: 142 ICNRLGWVTQPGTKQKTS----SPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
I RLGW + + S +PE TR +L+RWLP++EW+ INPLLVGFGQ CTPLRP
Sbjct: 175 ITERLGWTPERAIGKNGSPRKKTPEDTRASLERWLPRDEWIEINPLLVGFGQLTCTPLRP 234
Query: 198 RCGMCTVS--EYCPSAFKESSTSSSKSKKSESSSL 230
+C C ++ CPSAFKES+T +S+ ++++ L
Sbjct: 235 KCAECPLAADASCPSAFKESATPTSEKRRAKKIKL 269
>gi|311251810|ref|XP_003124777.1| PREDICTED: endonuclease III-like protein 1-like [Sus scrofa]
Length = 312
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 109/207 (52%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK RR+ VLLS +LSS TKD+V GA+QRL +GL T ++I +
Sbjct: 109 PVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAHGL-TVDSILQM 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPASVPELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI RL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIAGRLKW-----TKKATKSPEKTRTALEEWLPRELWSEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCQACLNRALCPAA 309
>gi|301782301|ref|XP_002926577.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein
1-like [Ailuropoda melanoleuca]
Length = 316
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 110 PVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRSRGL-TVDSILQT 168
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +Y GDIP+++ EL+ALPG+GPKMA++ M
Sbjct: 169 DDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPATVAELVALPGVGPKMAHLAMA 228
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW T+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 229 VAWGTVSGIAVDTHVHRIANRLGW-----TETATKSPEKTRAALEAWLPRELWSEINGLL 283
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ +C P PRC C CP+A
Sbjct: 284 VGFGQQVCLPTHPRCQDCLNRGLCPAA 310
>gi|281342124|gb|EFB17708.1| hypothetical protein PANDA_016228 [Ailuropoda melanoleuca]
Length = 266
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 63 PVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRSRGL-TVDSILQT 121
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +Y GDIP+++ EL+ALPG+GPKMA++ M
Sbjct: 122 DDSTLGTLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPATVAELVALPGVGPKMAHLAMA 181
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW T+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 182 VAWGTVSGIAVDTHVHRIANRLGW-----TETATKSPEKTRAALEAWLPRELWSEINGLL 236
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ +C P PRC C CP+A
Sbjct: 237 VGFGQQVCLPTHPRCQDCLNRGLCPAA 263
>gi|219519404|gb|AAI45444.1| Nthl1 protein [Mus musculus]
Length = 280
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D+S PPK RR+ VLLS +LSS TKD+V GA+QRL GL T E+I +
Sbjct: 77 PVDQLGAEHCYDASAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 135
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 136 DDDTLGRLIYPVGFWRNKVKYIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 195
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VDTHVHRI NRL W TK+ T +PE+TR+ L+ WLP+ W +N LL
Sbjct: 196 VAWGTISGIAVDTHVHRIANRLRW-----TKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 250
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 251 VGFGQQICLPVHPRCQACLNKALCPAA 277
>gi|45593498|sp|O35980.1|NTHL1_MOUSE RecName: Full=Endonuclease III-like protein 1
gi|2351099|dbj|BAA22080.1| endonuclease III homologue [Mus musculus]
gi|2407946|emb|CAA70866.1| endonuclease III homologue 1 [Mus musculus]
gi|3219302|dbj|BAA28846.1| homologue of endonuclease III [Mus musculus]
gi|6688669|emb|CAB65239.1| Endonuclease III homologue 1 [Mus musculus]
gi|148690400|gb|EDL22347.1| nth (endonuclease III)-like 1 (E.coli), isoform CRA_b [Mus
musculus]
gi|187952063|gb|AAI38853.1| Nth (endonuclease III)-like 1 (E.coli) [Mus musculus]
gi|187954093|gb|AAI38856.1| Nth (endonuclease III)-like 1 (E.coli) [Mus musculus]
Length = 300
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D+S PPK RR+ VLLS +LSS TKD+V GA+QRL GL T E+I +
Sbjct: 97 PVDQLGAEHCYDASAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 155
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 156 DDDTLGRLIYPVGFWRNKVKYIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 215
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VDTHVHRI NRL W TK+ T +PE+TR+ L+ WLP+ W +N LL
Sbjct: 216 VAWGTISGIAVDTHVHRIANRLRW-----TKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 270
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 271 VGFGQQICLPVHPRCQACLNKALCPAA 297
>gi|427777899|gb|JAA54401.1| Putative endonuclease iii [Rhipicephalus pulchellus]
Length = 321
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 146/216 (67%), Gaps = 8/216 (3%)
Query: 2 KTLE-PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAE 59
+T+E PV ++G D+ D S+P K R+ +L+S +LSS TKD+V A+ RL + L T E
Sbjct: 109 RTIEAPVDTMGCDKCPDQSVPQKLVRYQLLVSLMLSSQTKDEVTHAAVGRLREFAL-TPE 167
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
+I +ADE I+ LIYPV+FY KA ++K+ AK+ L KYDGDIP S++ L +LPG+GPKMA
Sbjct: 168 SIARADEKQIELLIYPVSFYKNKAKHLKQTAKVLLEKYDGDIPDSVEGLCSLPGVGPKMA 227
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
+ M+ GW GI VDTHVHRI NRLGW+ P T +PEQTR+AL+ WLP+E W
Sbjct: 228 YLAMSCGWGRTVGIGVDTHVHRISNRLGWLPAP-----TKTPEQTRKALEAWLPRELWDE 282
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
+N LLVGFGQT+C P P+C C + CP K
Sbjct: 283 VNHLLVGFGQTVCKPAGPKCSSCLNVQLCPFGKKHG 318
>gi|148690399|gb|EDL22346.1| nth (endonuclease III)-like 1 (E.coli), isoform CRA_a [Mus
musculus]
Length = 277
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D+S PPK RR+ VLLS +LSS TKD+V GA+QRL GL T E+I +
Sbjct: 74 PVDQLGAEHCYDASAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 132
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 133 DDDTLGRLIYPVGFWRNKVKYIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 192
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VDTHVHRI NRL W TK+ T +PE+TR+ L+ WLP+ W +N LL
Sbjct: 193 VAWGTISGIAVDTHVHRIANRLRW-----TKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 247
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 248 VGFGQQICLPVHPRCQACLNKALCPAA 274
>gi|427783639|gb|JAA57271.1| Putative endonuclease iii [Rhipicephalus pulchellus]
Length = 306
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 146/215 (67%), Gaps = 8/215 (3%)
Query: 2 KTLE-PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAE 59
+T+E PV ++G D+ D S+P K R+ +L+S +LSS TKD+V A+ RL + L T E
Sbjct: 94 RTIEAPVDTMGCDKCPDQSVPQKLVRYQLLVSLMLSSQTKDEVTHAAVGRLREFAL-TPE 152
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
+I +ADE I+ LIYPV+FY KA ++K+ AK+ L KYDGDIP S++ L +LPG+GPKMA
Sbjct: 153 SIARADEKQIELLIYPVSFYKNKAKHLKQTAKVLLEKYDGDIPDSVEGLCSLPGVGPKMA 212
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
+ M+ GW GI VDTHVHRI NRLGW+ P T +PEQTR+AL+ WLP+E W
Sbjct: 213 YLAMSCGWGRTVGIGVDTHVHRISNRLGWLPAP-----TKTPEQTRKALEAWLPRELWDE 267
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
+N LLVGFGQT+C P P+C C + CP K
Sbjct: 268 VNHLLVGFGQTVCKPAGPKCSSCLNVQLCPFGKKH 302
>gi|444727310|gb|ELW67811.1| Endonuclease III-like protein 1 [Tupaia chinensis]
Length = 258
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 136/207 (65%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK RR+ VLLS +LSS T+D+V GA+QRL GL +A+ I +
Sbjct: 55 PVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTRDQVTAGAMQRLRARGL-SADTILQM 113
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ +LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 114 DDDTLGELIYPVGFWRSKVKYIKQTSAILQQRYAGDIPASVAELVALPGVGPKMAHLAMA 173
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE TR AL+ WLP+ W IN LL
Sbjct: 174 VAWGTVSGIAVDTHVHRIANRLKW-----TKKTTKSPEATRVALEEWLPRGLWSEINGLL 228
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P RPRC C CP+A
Sbjct: 229 VGFGQQTCLPARPRCHTCLNQTLCPAA 255
>gi|308811190|ref|XP_003082903.1| putative endonuclease (ISS) [Ostreococcus tauri]
gi|116054781|emb|CAL56858.1| putative endonuclease (ISS), partial [Ostreococcus tauri]
Length = 820
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 7/208 (3%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
+ RR+ L SA+LSS TKD++ A++RL +G T E I DE + +I PV F+ R
Sbjct: 312 RYRRYLTLTSAMLSSQTKDEINHAAMRRLRAHGC-TPENILNTDEDALDAMINPVGFHRR 370
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
KA ++ AKI L +YDGDIP S++ L ALPG+GPKMA +VM +GW GICVD HVHR
Sbjct: 371 KAQYLRATAKILLDEYDGDIPPSVETLCALPGVGPKMAYLVMNVGWGEPTGICVDVHVHR 430
Query: 142 ICNRLGWVTQPGTKQKTS----SPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
I RLGWV + + S +PE TR AL+ WLPK EW+ INPLLVGFGQ CTPLRP
Sbjct: 431 ISERLGWVAKDVMGKNGSPRKKTPEDTRAALESWLPKHEWIEINPLLVGFGQLTCTPLRP 490
Query: 198 RCGMCTVSE--YCPSAFKESSTSSSKSK 223
+C C +++ CPSAFKE+ S + ++
Sbjct: 491 KCHACPLAKDGSCPSAFKENPASRATTR 518
>gi|157787119|ref|NP_001099198.1| endonuclease III-like protein 1 [Rattus norvegicus]
gi|149052032|gb|EDM03849.1| nth (endonuclease III)-like 1 (E.coli) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 300
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 136/207 (65%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG ++ D + PPK RR+ VLLS +LSS TKD+V GA+QRL GL T E+I +
Sbjct: 97 PVDQLGAEQCYDITAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 155
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ + LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 156 DDDLLGRLIYPVGFWRSKVKFIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 215
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T SPE+TR L+ WLP+ W IN LL
Sbjct: 216 VAWGTVSGIAVDTHVHRIANRLKW-----TKKMTKSPEETRRNLEEWLPRVLWSEINGLL 270
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 271 VGFGQQICLPVHPRCQACLNKALCPAA 297
>gi|227908769|ref|NP_032769.2| endonuclease III-like protein 1 [Mus musculus]
Length = 300
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 137/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D+S PK RR+ VLLS +LSS TKD+V GA+QRL GL T E+I +
Sbjct: 97 PVDQLGAEHCYDASASPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 155
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 156 DDDTLGRLIYPVGFWRNKVKYIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 215
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VDTHVHRI NRL W TK+ T +PE+TR+ L+ WLP+ W +N LL
Sbjct: 216 VAWGTISGIAVDTHVHRIANRLRW-----TKKMTKTPEETRKNLEEWLPRVLWSEVNGLL 270
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRC C CP+A
Sbjct: 271 VGFGQQICLPVHPRCQACLNKALCPAA 297
>gi|66818201|ref|XP_642760.1| hypothetical protein DDB_G0277247 [Dictyostelium discoideum AX4]
gi|60470837|gb|EAL68809.1| hypothetical protein DDB_G0277247 [Dictyostelium discoideum AX4]
Length = 349
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 141/218 (64%), Gaps = 9/218 (4%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+ L PV +LG + + ++ P E+RF +L+ LLSS TKD + A+ RL + GL T +
Sbjct: 130 ENLAPVDTLGAESFNQDNIEPIEKRFHILVGCLLSSQTKDAITHAAVVRLKEYGL-TVDK 188
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ D ++ L+YPV FY RKA +KKIA+I KY+GDIP + E+ LPGIGPKM N
Sbjct: 189 MLTIDTNELETLLYPVGFYKRKAIYLKKIAEILKNKYNGDIPPTFKEIEQLPGIGPKMTN 248
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+++ + W V+GI VD H+HRI NRLGWV KT +PE+T + L+ WLPKE W +
Sbjct: 249 LIVQIAWGRVEGIAVDVHMHRISNRLGWV-------KTKTPEETMKDLESWLPKENWATV 301
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTS 218
N LLVGFGQTIC+P+ P+C C V+ CP E ++S
Sbjct: 302 NHLLVGFGQTICSPVNPKCSNCLVNNLCPVGIIEMNSS 339
>gi|344292206|ref|XP_003417819.1| PREDICTED: endonuclease III-like protein 1-like [Loxodonta
africana]
Length = 314
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK +R+ VL+S +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 111 PVDQLGAEHCYDPSAPPKVQRYQVLVSLMLSSQTKDQVTAGAMQRLRVWGL-TVDSILRT 169
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++ + LI+PV F+ K +K+ + I +Y GDIPSS+ EL+ALPG+GPKMA++ M
Sbjct: 170 DDSMLGTLIHPVGFWRSKVKFIKQTSAILQQRYGGDIPSSVAELVALPGVGPKMAHLAMA 229
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W V GI VDTHVHRI NRL W TK++T +PEQTR AL+ WLP+E W IN LL
Sbjct: 230 TAWGTVSGIAVDTHVHRIANRLRW-----TKKQTKAPEQTRAALEEWLPRELWGEINTLL 284
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC PL PRC C CP+A
Sbjct: 285 VGFGQQICLPLHPRCQNCLNQVLCPAA 311
>gi|354478697|ref|XP_003501551.1| PREDICTED: endonuclease III-like protein 1-like [Cricetulus
griseus]
gi|344248342|gb|EGW04446.1| Endonuclease III-like protein 1 [Cricetulus griseus]
Length = 300
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 136/207 (65%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D+S PPK RR+ +LLS +LSS TKD+V GA+QRL GL T E+I +
Sbjct: 97 PVDQLGAEHCYDTSAPPKVRRYQILLSLMLSSQTKDQVTAGAMQRLRARGL-TVESILQT 155
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ + LIYPV F+ K +K+ I +Y+GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 156 DDDMLGRLIYPVGFWRNKVKFIKQTTAILQQRYEGDIPASVAELVALPGVGPKMAHLAMA 215
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VDTHVHRI NRL W TK T +PE+TR AL+ WLP+ W IN L+
Sbjct: 216 VAWGTISGIAVDTHVHRITNRLRW-----TKNVTKTPEETRTALEEWLPRGLWSEINGLM 270
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ P+C C CP+A
Sbjct: 271 VGFGQQICLPVHPQCQACLNQALCPAA 297
>gi|449273757|gb|EMC83166.1| Endonuclease III-like protein 1, partial [Columba livia]
Length = 256
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 140/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +GV++ DSS PP+ R+ VLLS +LSS TKD+V A+ RL Q+GL T + I +
Sbjct: 53 PVDEMGVEKCYDSSAPPQVMRYQVLLSLMLSSQTKDQVTSAAMLRLRQHGL-TIDRILQM 111
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ +IYPV F+ K +K+ I KY GDIP +++EL+ LPG+GPKMA++ MT
Sbjct: 112 DDATLGQMIYPVGFWRNKVKYIKQTTAILKQKYGGDIPRTVEELVQLPGVGPKMAHLAMT 171
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W +V GI VDTHVHRI NRL WV K++T PE+TR AL+ WLP++ W IN LL
Sbjct: 172 IAWDSVSGIAVDTHVHRITNRLKWV-----KKETRHPEETRVALEDWLPRDLWREINWLL 226
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C + CP+A
Sbjct: 227 VGFGQQTCLPVNPRCNECLNRDLCPAA 253
>gi|73959522|ref|XP_853674.1| PREDICTED: endonuclease III-like protein 1 [Canis lupus familiaris]
Length = 312
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV+ D S PPK +R+ VLLS +LSS TKD+V GA+QRL +GL T ++I +
Sbjct: 109 PVDWLGVEHCHDPSAPPKVQRYQVLLSLMLSSQTKDQVTAGAMQRLRAHGL-TVDSILQT 167
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I +Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 168 DDATLGSLIYPVGFWRSKVKYIKQTSAILQQRYGGDIPASVAELVALPGVGPKMAHLAMA 227
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI N T+ T+SPE+TR AL+ WLP+E W IN LL
Sbjct: 228 VAWGTVSGIAVDTHVHRIAN-----RLRWTRTTTTSPEKTRAALEEWLPRELWGEINGLL 282
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRCG C CP+A
Sbjct: 283 VGFGQQTCLPVRPRCGACLNRSLCPAA 309
>gi|156563964|dbj|BAF76070.1| Escherichia coli endonuclease III-like 1 [Gallus gallus]
Length = 281
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +GVD+ D+S PP+ R+ VLLS +LSS TKD+V A+ RL Q GL T ++I +
Sbjct: 78 PVDEMGVDKCYDTSAPPQVMRYQVLLSLMLSSQTKDQVTSAAMLRLRQRGL-TVDSILQM 136
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ +IYPV F+ K +K+ I KY GDIP +++EL+ LPG+GPKMA++ M
Sbjct: 137 DDATLGQIIYPVGFWRNKVKYIKQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMN 196
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W +V GI VDTHVHRI NRL WV K++T PE+TR AL+ WLP++ W IN LL
Sbjct: 197 IAWNSVSGIAVDTHVHRITNRLKWV-----KKETRYPEETRVALEDWLPRDLWREINWLL 251
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C + CP+A
Sbjct: 252 VGFGQQTCLPVNPRCKECLNQDICPTA 278
>gi|118601744|ref|NP_001073043.1| endonuclease III-like protein 1 [Gallus gallus]
gi|118341820|dbj|BAF37123.1| Escherichia coli endonuclease III-like 1 [Gallus gallus]
Length = 281
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +GVD+ D+S PP+ R+ VLLS +LSS TKD+V A+ RL Q GL T ++I +
Sbjct: 78 PVDEMGVDKCYDTSAPPQVMRYQVLLSLMLSSQTKDQVTSAAMLRLRQRGL-TVDSILQM 136
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ +IYPV F+ K +K+ I KY GDIP +++EL+ LPG+GPKMA++ M
Sbjct: 137 DDATLGQIIYPVGFWRNKVKYIKQTTAILKQKYGGDIPGTVEELVKLPGVGPKMAHLAMN 196
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W +V GI VDTHVHRI NRL WV K++T PE+TR AL+ WLP++ W IN LL
Sbjct: 197 IAWNSVSGIAVDTHVHRITNRLKWV-----KKETRYPEETRVALEDWLPRDLWREINWLL 251
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C + CP+A
Sbjct: 252 VGFGQQTCLPVNPRCKECLNQDICPAA 278
>gi|357130118|ref|XP_003566700.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein
1-like [Brachypodium distachyon]
Length = 184
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 128/171 (74%), Gaps = 7/171 (4%)
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM--- 121
DE T+ +LI PV FY RKA +K+ +KICL + GDIP SL ELL+L G+GPK+A++
Sbjct: 14 DETTLANLIKPVGFYQRKAXFIKEASKICLEVFGGDIPDSLTELLSLKGVGPKLADLLFF 73
Query: 122 ---VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
VM++ W N QGICVDTHVHRI NRLGWV + GTKQKT++PEQTR +L++W PK+EW
Sbjct: 74 TKQVMSIAWKNTQGICVDTHVHRISNRLGWVYREGTKQKTTTPEQTRMSLEKWSPKDEWE 133
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSS 229
IN LLVGFGQTICT LRP+C C ++ CPS FKE S S SK++++ +S
Sbjct: 134 PINLLLVGFGQTICTLLRPKC-XCGINTICPSVFKEPSKSKSKARETRCAS 183
>gi|328720736|ref|XP_001949525.2| PREDICTED: endonuclease III-like protein 1-like [Acyrthosiphon
pisum]
Length = 280
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 4 LEPVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
+ PV ++G D+ D + PP+ R+ VL+S +LSS TKD+V A+QRL Q+GL ++
Sbjct: 68 VAPVDNMGCDQAADLNEPPEVVRYHVLISLMLSSQTKDEVNFAAMQRLKQHGLTVDNILE 127
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+D+ K LIYPV F+ K +K+ +I Y+GDIP+++ +L LPGIGPKMA++
Sbjct: 128 TSDDHLGK-LIYPVGFWKTKVQYIKRTTRILKDTYNGDIPNTIKDLCQLPGIGPKMAHLC 186
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M+ W V GI VDTHVHRI NRLGWV K+ T +PE TR AL+ WLPKE W +N
Sbjct: 187 MSCAWNEVTGIGVDTHVHRISNRLGWV-----KKATKTPENTRIALESWLPKELWREVNH 241
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSK 221
+LVGFGQTIC P+ P C C + CPSA S+T K
Sbjct: 242 MLVGFGQTICRPIGPHCDSCLNKKTCPSAVSNSTTIKKK 280
>gi|326929092|ref|XP_003210705.1| PREDICTED: endonuclease III-like protein 1-like [Meleagris
gallopavo]
Length = 272
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 139/207 (67%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +GVD+ D++ PP+ R+ VLLS +LSS TKD+V A+ RL Q GL T ++I +
Sbjct: 69 PVDEMGVDKCYDTNAPPQVMRYQVLLSLMLSSQTKDQVTSAAMLRLRQRGL-TVDSILQM 127
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ +IYPV F+ K +K+ I Y GDIPS++++L+ LPG+GPKMA++ M
Sbjct: 128 DDATLGQIIYPVGFWRNKVKYIKQTTAILKQNYGGDIPSTVEDLVKLPGVGPKMAHLAMN 187
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W +V GI VDTHVHRI NRL WV K++T PE+TR AL+ WLP++ W IN LL
Sbjct: 188 IAWNSVTGIAVDTHVHRITNRLKWV-----KKETRYPEETRVALEDWLPRDLWREINWLL 242
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRC C + CP+A
Sbjct: 243 VGFGQQTCLPVNPRCKECLNQDICPAA 269
>gi|395515750|ref|XP_003762062.1| PREDICTED: endonuclease III-like protein 1 [Sarcophilus harrisii]
Length = 297
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 138/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D + PP+ R+ VLLS +LSS TKD++ A+ RL + GL T ++I +
Sbjct: 94 PVDHMGAEHCYDQNAPPEVMRYQVLLSLMLSSQTKDQITAAAMGRLRERGL-TLDSILQM 152
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ +KI +Y GDIP++++EL+ALPG+GPKMA++ M
Sbjct: 153 DDTTLGQLIYPVGFWRSKVRYIKQTSKILKQQYGGDIPATVEELVALPGVGPKMAHLAMA 212
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK++T PE+TR AL+ WLP++ W IN LL
Sbjct: 213 IAWGKVSGIAVDTHVHRITNRLKW-----TKKETKYPEETRAALEDWLPRQLWKEINWLL 267
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+ PRCG C CP+A
Sbjct: 268 VGFGQQTCLPVNPRCGDCLNQGLCPAA 294
>gi|340374045|ref|XP_003385549.1| PREDICTED: endonuclease III-like protein 1-like [Amphimedon
queenslandica]
Length = 295
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 131/207 (63%), Gaps = 6/207 (2%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV +G S P +RF VL+S +LSS TKD V A+ L + GL T E +
Sbjct: 92 PVDDVGAASLPESKLPHVKRFEVLVSLMLSSQTKDGVTAKAMSNLQEYGL-TIEGLIDIK 150
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
+ ++ LI+PV FY RKA +KK A+I K++GDIP SL+ L+ALPG+GPKMA++ M +
Sbjct: 151 QDKLEQLIFPVGFYRRKAQYLKKTAQILKEKHNGDIPESLEGLMALPGVGPKMAHLCMDI 210
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W NV GI VDTHVHRI NRL WV +P T +PE TR+ L+ WLP+ EW N LLV
Sbjct: 211 AWGNVTGIGVDTHVHRIANRLKWVKKP-----TKTPEDTRKGLEEWLPQSEWSSANLLLV 265
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAF 212
GFGQ IC PLRP+C C CPS+
Sbjct: 266 GFGQQICLPLRPKCSECLNKSICPSSL 292
>gi|390369569|ref|XP_793669.3| PREDICTED: endonuclease III-like protein 1-like [Strongylocentrotus
purpuratus]
Length = 445
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 139/210 (66%), Gaps = 7/210 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G ++ DSS P+ R+ VLLS +LSS TKD+V A+ +L +GL T + I K
Sbjct: 222 PVDSMGAEKICDSSAAPEVYRYHVLLSLMLSSQTKDQVTSAAMVKLRSHGL-TVDNILKT 280
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
EA I +LIYPV F+ RKA +K+ +I +Y GDIP SL EL+ LPG+GPKMA++VM
Sbjct: 281 PEAKIGELIYPVGFWKRKADFIKRTTQILKDQYQGDIPPSLKELIQLPGVGPKMAHIVMD 340
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+GW + GI VDTHVHRI NRL WV +++T +PE TR +L+ WLP++ W +N LL
Sbjct: 341 VGWNQITGIGVDTHVHRISNRLKWV-----QKETKTPEATRVSLEDWLPRDLWSEVNVLL 395
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
VGFGQ C P+ PRC C + CP +E
Sbjct: 396 VGFGQQTCLPVGPRCLECLNKDICPFGKQE 425
>gi|325193803|emb|CCA28012.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 319
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 133/203 (65%), Gaps = 6/203 (2%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP 75
D+ P RF VL+SA+LSS TKD + A++RLL N L T E++ K E + +IYP
Sbjct: 114 DTKHPAHVARFHVLISAMLSSQTKDPINAAAMRRLLDNEL-TVESMIKIKEDKLAQIIYP 172
Query: 76 VAFYTRKACNMKKIAKICLTKY--DG--DIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
V+FY KA ++KK+A I + DG DIP +++ L+ALPG+GPKMA +VM + W
Sbjct: 173 VSFYRNKAKSIKKVASILKERESEDGICDIPETVENLVALPGVGPKMAYLVMNVAWNKPV 232
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQ-KTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GICVDTHVHRICNRLGWV+ K K PE+TR+ L+ WLP E W IN LLVGFGQT
Sbjct: 233 GICVDTHVHRICNRLGWVSTWNKKNPKAQDPEKTRKELEAWLPSEHWDSINQLLVGFGQT 292
Query: 191 ICTPLRPRCGMCTVSEYCPSAFK 213
IC +P+C C + CPSA K
Sbjct: 293 ICHARQPKCKDCALQSICPSASK 315
>gi|241682023|ref|XP_002401078.1| endonuclease, putative [Ixodes scapularis]
gi|215504370|gb|EEC13864.1| endonuclease, putative [Ixodes scapularis]
Length = 326
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 143/213 (67%), Gaps = 7/213 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D+ D +LP K R+ +L+S +LSS TKD+V A+ RL GL T E + A
Sbjct: 115 PVDTMGCDKCPDQTLPEKLVRYQLLVSLMLSSQTKDEVTHAAVGRLRDFGL-TPEVVSAA 173
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+E +++LIYPV+FY KA ++K+ +++ L +YDGDIP S++ L LPG+GPKM+ + M+
Sbjct: 174 EEKQLEELIYPVSFYKNKAKHLKRTSQVLLDEYDGDIPDSIEGLCKLPGVGPKMSYLAMS 233
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
GW GI VDTHVHRI N LGW+ Q T +PEQTR+AL+ WLP++ W +N LL
Sbjct: 234 CGWKRTVGIGVDTHVHRISNWLGWLP-----QATKTPEQTRKALEAWLPRDLWDEVNLLL 288
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESST 217
VGFGQT+C P+ P+C C + CP K+ ++
Sbjct: 289 VGFGQTVCKPVAPKCSSCLNLQLCPYGRKQVNS 321
>gi|357610921|gb|EHJ67214.1| hypothetical protein KGM_13809 [Danaus plexippus]
Length = 429
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/230 (46%), Positives = 142/230 (61%), Gaps = 7/230 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G + D PPK R+ L+S +LSS TKD+V A++RL GL +D +
Sbjct: 94 PVDSMGCHMSMDEDAPPKVMRYQSLISLMLSSQTKDQVTFAAMERLRAKGLTVDNILDMS 153
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
DE + LIYPV F+ K +KK + +YDGDIP S+D+L L G+GPKMA++ M
Sbjct: 154 DEE-LGQLIYPVGFWKTKVKYIKKTTQTLKDQYDGDIPDSVDKLCKLTGVGPKMAHICMK 212
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NR+GWV K+ TS+PE TR+ALQ WLP E W +N L+
Sbjct: 213 VAWNKVTGIGVDTHVHRISNRIGWV-----KKSTSTPEDTRKALQSWLPFELWSEVNHLM 267
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLRKLE 234
VGFGQTIC P+ P C C ++ CPS+ K+ + +S K + + K E
Sbjct: 268 VGFGQTICLPIGPNCQECLNNDICPSSEKDKKSPYKRSPKKSPAKIIKSE 317
>gi|390333159|ref|XP_001200032.2| PREDICTED: endonuclease III-like protein 1-like [Strongylocentrotus
purpuratus]
Length = 409
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 137/205 (66%), Gaps = 7/205 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G ++ DSS P+ R+ VLLS +LSS TKD+V A+ +L +GL T + I K
Sbjct: 198 PVDSMGAEKICDSSAAPEVYRYHVLLSLMLSSQTKDQVTSAAMVKLRSHGL-TVDNILKT 256
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
EA I +LIYPV F+ RKA +K+ +I +Y GDIP SL EL+ LPG+GPKMA++VM
Sbjct: 257 PEAKIGELIYPVGFWKRKADFIKRTTQILKDQYQGDIPPSLKELIQLPGVGPKMAHIVMD 316
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+GW + GI VDTHVHRI NRL WV +++T +PE TR +L+ WLP++ W +N LL
Sbjct: 317 VGWNQITGIGVDTHVHRISNRLKWV-----QKETKTPEATRVSLEDWLPRDLWSEVNVLL 371
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP 209
VGFGQ C P+ PRC C + CP
Sbjct: 372 VGFGQQTCLPVGPRCLECLNKDICP 396
>gi|292610084|ref|XP_001346643.3| PREDICTED: RUN domain containing 3A [Danio rerio]
Length = 430
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 140/209 (66%), Gaps = 7/209 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G ++ D+ P+ RR+ VL+S +LSS TKD+V GA+QRL ++GL + + I K
Sbjct: 147 PVDQMGAEKCYDTQGLPEVRRYQVLISLMLSSQTKDQVTAGAMQRLREHGL-SVDGILKM 205
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ + ++ GDIP++++ L+ LPG+GPKMA++ M
Sbjct: 206 DDETLGKLIYPVGFWRTKVKYIKQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMD 265
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW TK++T +PE+TR AL+ WLP++ W IN LL
Sbjct: 266 IAWNQVSGIGVDTHVHRISNRLGW-----TKKETKTPEETRRALEEWLPRDLWSEINWLL 320
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
VGFGQ +C P+ P C +C CPSA +
Sbjct: 321 VGFGQQVCLPVGPLCSVCLNQHTCPSAHR 349
>gi|126631837|gb|AAI33923.1| LOC100008368 protein [Danio rerio]
Length = 340
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 139/209 (66%), Gaps = 7/209 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D+ P+ RR+ VL+S +LSS TKD+V GA+QRL ++GL + + I K
Sbjct: 57 PVDQMGAENCYDTQALPEVRRYQVLISLMLSSQTKDQVTAGAMQRLREHGL-SVDGILKM 115
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ + ++ GDIP++++ L+ LPG+GPKMA++ M
Sbjct: 116 DDETLGKLIYPVGFWRTKVKYIKQATALIQQEFGGDIPNTVEGLIRLPGVGPKMAHLAMD 175
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW TK++T +PE+TR AL+ WLP++ W IN LL
Sbjct: 176 IAWNQVSGIGVDTHVHRISNRLGW-----TKKETKTPEETRRALEEWLPRDLWSEINWLL 230
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
VGFGQ +C P+ P C +C CPSA +
Sbjct: 231 VGFGQQVCLPVGPLCSVCLNQHTCPSAHR 259
>gi|281202379|gb|EFA76584.1| putative endonuclease III [Polysphondylium pallidum PN500]
Length = 470
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 136/212 (64%), Gaps = 10/212 (4%)
Query: 4 LEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
L PV G + D++L K RF VL++ LLSS TKD V A+ +L +GL T + I
Sbjct: 244 LAPVDWAGCETFNDNTLEDKVSRFHVLVACLLSSQTKDAVTYAAMNKLKAHGL-TVDNII 302
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
TI+ L+YPV+FY RKA +KKI I KY GDIP + +++++LPGIG KM N++
Sbjct: 303 ATSHETIETLLYPVSFYKRKAIYLKKIVNIMKEKYKGDIPEAYNDIMSLPGIGLKMTNLI 362
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ W V+GI VD H+HRICNRLGWV T++PE+T +ALQ W+P++ W IN
Sbjct: 363 VQ-AWGRVEGIAVDVHMHRICNRLGWVN-------TNTPEETTKALQDWVPRDRWAEINK 414
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
LLVGFGQT+C P RP+C C ++ CP+ +
Sbjct: 415 LLVGFGQTVCAPTRPKCESCKINHLCPTGIQN 446
>gi|391340717|ref|XP_003744683.1| PREDICTED: endonuclease III-like protein 1-like [Metaseiulus
occidentalis]
Length = 340
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 134/208 (64%), Gaps = 5/208 (2%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
PK +RF +L+S LLSS T+D+V A RL G T E + + DEA I+ +++PV FY
Sbjct: 119 PKLQRFQILISLLLSSQTRDEVNYAACSRLHDFGF-TPEKLKETDEAIIEKMLHPVGFYR 177
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++K+A+IC +YD DIP S++EL LPG+GPKMA + M W GI VDTHVH
Sbjct: 178 TKAKNLRKVAQICFERYDSDIPHSVEELCQLPGVGPKMAYLTMNCAWKETTGIGVDTHVH 237
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R W+ K +T SPE TR L+ WLP + W +N LLVGFGQT+C P P+C
Sbjct: 238 RLAQRWLWL----PKGQTKSPEDTRLQLESWLPSDLWEELNWLLVGFGQTVCGPTHPKCS 293
Query: 201 MCTVSEYCPSAFKESSTSSSKSKKSESS 228
C +++ CP+AFKE+ +S K ++S
Sbjct: 294 ECLINDVCPNAFKENKKKASPEGKKKAS 321
>gi|126335528|ref|XP_001366843.1| PREDICTED: endonuclease III-like protein 1-like [Monodelphis
domestica]
Length = 292
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 136/207 (65%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G ++ D + P+ R+ VLLS +LSS TKD+V A+ RL + GL T + I +
Sbjct: 89 PVDHMGAEQCHDQNAAPEVMRYQVLLSLMLSSQTKDQVTAAAMGRLRERGL-TLDNILQM 147
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ +KI +Y GDIP+++ EL+ALPG+GPKMA++ M
Sbjct: 148 DDNTLGQLIYPVGFWRSKVQYIKQTSKILKQQYGGDIPATVAELVALPGVGPKMAHLAMA 207
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL W TK+ T PE+TR AL+ WLP++ W IN LL
Sbjct: 208 IAWDTVSGIAVDTHVHRITNRLKW-----TKKGTKYPEETRAALEDWLPRQLWKEINWLL 262
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ PRCG C CP+A
Sbjct: 263 VGFGQQICLPVNPRCGNCLNRGLCPAA 289
>gi|260801749|ref|XP_002595758.1| hypothetical protein BRAFLDRAFT_200910 [Branchiostoma floridae]
gi|229281005|gb|EEN51770.1| hypothetical protein BRAFLDRAFT_200910 [Branchiostoma floridae]
Length = 239
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 141/221 (63%), Gaps = 9/221 (4%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G D + P+ +R+ L+S +LSS TKD++ A++RL+ +GL T + I K
Sbjct: 24 PVDSMGCQTCPDKNAAPEVKRYHALISLMLSSQTKDQMTSAAMKRLIDHGL-TVDNILKT 82
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + +LIYPV F+ K +K +I +Y GDIP+++ E++ LPG+GPKMA + M
Sbjct: 83 SDQKLGELIYPVGFWKTKVKYIKNTTQILKDQYGGDIPATVAEMVKLPGVGPKMAYLTMD 142
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+GW V+GICVDTHVHRI NRLGW+ +P T PE TR AL+ WLP+E W +N LL
Sbjct: 143 VGWGKVEGICVDTHVHRISNRLGWLKKP-----TKVPEDTRVALEEWLPREHWSELNWLL 197
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKS 225
VGFGQ C P+ P+C C E CP F +S SK+KKS
Sbjct: 198 VGFGQQTCLPVSPKCSGCLNKEICP--FGKSQLRYSKNKKS 236
>gi|113205550|ref|NP_001037884.1| nth endonuclease III-like 1 [Xenopus (Silurana) tropicalis]
gi|89267879|emb|CAJ83279.1| nth endonuclease III-like 1 (E. coli) [Xenopus (Silurana)
tropicalis]
gi|166796488|gb|AAI59396.1| nth endonuclease III-like 1 (E. coli) [Xenopus (Silurana)
tropicalis]
Length = 300
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 138/210 (65%), Gaps = 7/210 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G ++ D + P+ R+ +LLS +LSS TKD+V A+ RL Q+GL T I +
Sbjct: 94 PVDQMGAEKCYDQNAAPEVMRYQILLSLMLSSQTKDQVTSAAMCRLRQHGL-TVSRILET 152
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +K+ +I KY GDIP ++ +L+ LPG+GPKMA++VM
Sbjct: 153 DDGTLGKLIYPVGFWKNKVKYIKQTTEILQEKYGGDIPDNVTDLVKLPGVGPKMAHLVMD 212
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W NV GI VDTHVHRI NRL WV +++T +PE+TR A++ W+P+E W IN LL
Sbjct: 213 IAWNNVSGIGVDTHVHRISNRLKWV-----RKETKTPEETRVAMEDWMPRELWSEINWLL 267
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
VGFGQ +C P+ PRC C + CP A K+
Sbjct: 268 VGFGQQVCLPVSPRCSECLNKDICPGAKKK 297
>gi|432847899|ref|XP_004066205.1| PREDICTED: endonuclease III-like protein 1-like [Oryzias latipes]
Length = 416
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 135/211 (63%), Gaps = 7/211 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G ++ D+ P RRF VL+S +LSS T+D+V A+Q+L +G TA I
Sbjct: 162 PVDQMGAEKCFDTKAPAHVRRFQVLVSLMLSSQTRDQVTAAAMQKLRAHGC-TAGNILAT 220
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ LIYPV F+ K +KK + I ++ GDIPS ++ L+ LPG+GPKMA++ M
Sbjct: 221 DDHTLGTLIYPVGFWRNKVKYLKKTSAILQEQFGGDIPSDVEGLVRLPGVGPKMAHLAMD 280
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGWV +P T +PE TR AL+ WLP++ W +IN LL
Sbjct: 281 IAWNQVSGIGVDTHVHRISNRLGWVRKP-----TKTPEDTRRALEEWLPRDLWSQINWLL 335
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
VGFGQ +C P+ P C MC CPSA K S
Sbjct: 336 VGFGQQMCLPVGPLCSMCLNQHSCPSAHKSS 366
>gi|328867595|gb|EGG15977.1| putative endonuclease III [Dictyostelium fasciculatum]
Length = 405
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 131/209 (62%), Gaps = 9/209 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +LG D D L PK RF L+ +LSS T+D+ + RL ++GL T E + +
Sbjct: 175 PVDNLGCDSFNDDKLDPKVSRFHTLVGCMLSSQTRDEQTYACMNRLRKHGL-TIENVLAS 233
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D T++ LIYPV+FY RKA +K+I I KY GDIP + ELL LPGIG KM N+++
Sbjct: 234 DTDTLEKLIYPVSFYKRKADYLKRICIIMRDKYKGDIPPNFKELLELPGIGQKMTNLIVQ 293
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W +GI +D H+HRI NRLGWV T +P++T AL+ WLP E W IN LL
Sbjct: 294 VAWGRTEGIAIDVHMHRIANRLGWV-------HTETPDKTEIALKEWLPFERWDGINKLL 346
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
VGFGQT CTPLRP+C C V+ CP+ +
Sbjct: 347 VGFGQTTCTPLRPKCQNCKVNHLCPTGIE 375
>gi|384490585|gb|EIE81807.1| hypothetical protein RO3G_06512 [Rhizopus delemar RA 99-880]
Length = 322
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 137/210 (65%), Gaps = 12/210 (5%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGA---LQRLLQNGLHTAEAI 61
PV ++G + ++ PPK +RF L++ +LS+ TKD V LQ L GL+ E+I
Sbjct: 74 PVDTMGCERLAQTTAPPKIQRFQTLVALMLSAQTKDTVTSATMIKLQNELPAGLN-LESI 132
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
D T+ LI V F+++KA +KK A+I +YDGDIP +++ L +LPG+GPKM +
Sbjct: 133 LNVDVTTLDQLIRSVGFHSKKAVYIKKTAEILRDQYDGDIPDTIEGLTSLPGVGPKMGYL 192
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
+ + W GI VD HVHRI NRLGWV+ T +PE+TRE+LQ WLPK++W +IN
Sbjct: 193 TLQVAWNKNLGIGVDVHVHRITNRLGWVS-------TKTPEETRESLQSWLPKDKWKKIN 245
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
P+LVG+GQ +C P PRC +C VSEYCPS+
Sbjct: 246 PILVGYGQIVCLPRNPRCDVCPVSEYCPSS 275
>gi|146078123|ref|XP_001463464.1| putative endonuclease III [Leishmania infantum JPCM5]
gi|398010980|ref|XP_003858686.1| endonuclease III, putative [Leishmania donovani]
gi|134067550|emb|CAM65829.1| putative endonuclease III [Leishmania infantum JPCM5]
gi|322496896|emb|CBZ31966.1| endonuclease III, putative [Leishmania donovani]
Length = 258
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 139/219 (63%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDETDSSLPPKE-RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G PKE +RF L++ +LS+ TKD V A+ L+++GL TA+++
Sbjct: 29 PVDTMGCHRLRDEYAPKEVQRFHTLVALMLSAQTKDVVTAAAMDTLIKHGL-TAQSVHAM 87
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E + I V F+ +KA N+K++A I + YDG++P EL+ALPG+GPKMAN+
Sbjct: 88 TETELDKHICKVGFHNKKAKNIKEVAAILMKNYDGEVPREYAELIALPGVGPKMANLFFQ 147
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T +PE TR+AL+ WLP+E W IN L+
Sbjct: 148 DADHRVIGIGVDTHVHRISQRYRWV--PST---VKTPEDTRKALESWLPREHWGTINSLM 202
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VG GQT+CTPLRP+CG+C +S+ CP+AFKE+ ++K
Sbjct: 203 VGLGQTVCTPLRPKCGICELSDICPNAFKETQQKRLRAK 241
>gi|410917257|ref|XP_003972103.1| PREDICTED: endonuclease III-like protein 1-like [Takifugu rubripes]
Length = 357
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 136/211 (64%), Gaps = 7/211 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D+ D+ P +RF VL+S +LSS TKD+V A+Q+L +G T E I
Sbjct: 122 PVDNMGADKCHDADAPAHVKRFQVLVSLMLSSQTKDQVTSAAMQKLRAHGC-TVENILAT 180
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
++ T+ LIYPV F+ K +K + + ++ GDIP S++ L+ LPG+GPKMA++ M
Sbjct: 181 NDETLGQLIYPVGFWRNKVKYLKLTSAMLQKEFGGDIPDSVEGLVRLPGVGPKMAHLAMD 240
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW+ +P T +PE+TR++L+ WLP+E W IN LL
Sbjct: 241 IAWDQVSGIGVDTHVHRISNRLGWLKKP-----TKTPEETRKSLEEWLPRELWSEINWLL 295
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
VGFGQ +C P+ P C +C CPSA K S
Sbjct: 296 VGFGQQVCLPVSPLCSVCLNQHDCPSAHKNS 326
>gi|308481910|ref|XP_003103159.1| CRE-NTH-1 protein [Caenorhabditis remanei]
gi|308260264|gb|EFP04217.1| CRE-NTH-1 protein [Caenorhabditis remanei]
Length = 299
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 142/228 (62%), Gaps = 22/228 (9%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D P+ RF VL++ +LSS T+D+V A++RL +GL +I+K
Sbjct: 46 PVDTMGCHKLADPLAKPEVHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGL----SIEKI 101
Query: 65 DEATIKDL---IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
E + DL + PV FY RKA +++ AKI + KY GDIP SLD L +LPG+GPKMAN+
Sbjct: 102 LEFPVPDLERILCPVGFYKRKAVYLQQTAKILVDKYSGDIPDSLDGLCSLPGVGPKMANL 161
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
VM + W +GI VDTHVHRI NRLGW+ KT +PE+TR+AL+ LPK EW IN
Sbjct: 162 VMQIAWNKCEGIAVDTHVHRISNRLGWI-------KTDTPEKTRKALEILLPKSEWQPIN 214
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSS 229
LLVGFGQ +C PLRP+C C CPS S+ K K E S
Sbjct: 215 HLLVGFGQMLCQPLRPKCSTCLCRFTCPS-------STDKKMKEEESD 255
>gi|170035458|ref|XP_001845586.1| endonuclease iii [Culex quinquefasciatus]
gi|167877498|gb|EDS40881.1| endonuclease iii [Culex quinquefasciatus]
Length = 363
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 138/211 (65%), Gaps = 8/211 (3%)
Query: 6 PVYSLGVDE--TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
PV S+G D+ D ++PPK RRF L+S +LSS TKD+ +QRL ++GL T E +
Sbjct: 141 PVDSMGCDQFRDDVTVPPKTRRFHTLVSLMLSSQTKDQANFECMQRLRKHGL-TPEQMVA 199
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
D T++ LI+PV+FY KA +++ + + L+ YDGDIP +++ L+ LPG+G KMA++ M
Sbjct: 200 TDVETLEKLIHPVSFYKNKAKFIRQTSALLLSTYDGDIPDTIEGLMKLPGVGAKMAHLCM 259
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
W V GI VDTHVHRI N LGWV ++T +PE+TR L+RWLP E W +N L
Sbjct: 260 GAAWNIVTGIGVDTHVHRISNWLGWVP-----RETRTPEETRLLLERWLPFELWEEVNHL 314
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
LVGFGQTICT PRC C +E CP+ K
Sbjct: 315 LVGFGQTICTSTYPRCNECGNAEICPARGKH 345
>gi|339249321|ref|XP_003373648.1| putative G patch domain-containing protein 1-like protein
[Trichinella spiralis]
gi|316970197|gb|EFV54175.1| putative G patch domain-containing protein 1-like protein
[Trichinella spiralis]
Length = 1154
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 7/209 (3%)
Query: 4 LEPVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
L PV ++G + D+ K +R+ +LLS +LSS TKD++ A+ L + G + I
Sbjct: 940 LAPVDTVGCSKLFDAGADEKTKRYQILLSLMLSSQTKDEITAAAMTSLKKYGC-SVNKIL 998
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ DE+ + +LIYPV F KA +KK +I ++YDGDIP S+DEL LPG+GPKMA +
Sbjct: 999 QTDESDLAELIYPVGFCKSKAKYIKKTTEILQSQYDGDIPKSVDELCQLPGVGPKMALLT 1058
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M W +GI VDTHVHRI NRLGW+ P T PEQTR+ L+ WLPK W +IN
Sbjct: 1059 MLTAWNQCEGIAVDTHVHRISNRLGWLPSP-----TKQPEQTRKGLENWLPKSYWPQINK 1113
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVGFGQT+C P+ P C C CP A
Sbjct: 1114 LLVGFGQTVCLPVNPHCSNCLNFSICPHA 1142
>gi|341900542|gb|EGT56477.1| CBN-NTH-1 protein [Caenorhabditis brenneri]
Length = 298
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 137/210 (65%), Gaps = 15/210 (7%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D PP+ RF VL++ +LSS T+D+V A++RL +GL +I K
Sbjct: 38 PVDTMGCHKLADPLAPPEVHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGL----SIQKI 93
Query: 65 DEATIKDL---IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
E + DL + PV FY RKA +++ A+I KY GDIP SLD L +LPG+GPKMAN+
Sbjct: 94 LEFPVPDLEKILCPVGFYKRKAIYLQQTARILTDKYSGDIPDSLDGLCSLPGVGPKMANL 153
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
VM + W +GI VDTHVHRI NRLGW+ KTS+PE+T++AL+ LPK EW IN
Sbjct: 154 VMQIAWDKCEGIAVDTHVHRISNRLGWI-------KTSTPEKTQKALEILLPKSEWQPIN 206
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVGFGQ +C P+RP+C C CPS+
Sbjct: 207 HLLVGFGQMLCQPVRPKCSTCLCKFTCPSS 236
>gi|156354363|ref|XP_001623365.1| predicted protein [Nematostella vectensis]
gi|156210057|gb|EDO31265.1| predicted protein [Nematostella vectensis]
Length = 239
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 137/207 (66%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S G + T D+S P+ R+ VL+S +LSS TKD V A+++L +G + ++ +
Sbjct: 23 PVDSQGCERTADTSTTPQVYRYQVLVSLMLSSQTKDPVTFAAMEKLKAHGCTVDKILNTS 82
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ + ++IYPV F+ +K +KK IC +Y GDIP ++ EL+ LPG+GPKMA++ M+
Sbjct: 83 DDK-LGEMIYPVGFWRKKVDYIKKATNICKAQYQGDIPCTISELVELPGVGPKMAHICMS 141
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VDTHVHRICNRLGW TK+ T +PE++R A++ WLP+EEW +N LL
Sbjct: 142 VAWGQLTGIGVDTHVHRICNRLGW-----TKKPTKTPEESRLAVEAWLPREEWSELNVLL 196
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P+ P C C + CP A
Sbjct: 197 VGFGQQICLPVGPNCQSCLNRDICPGA 223
>gi|348536721|ref|XP_003455844.1| PREDICTED: endonuclease III-like protein 1-like [Oreochromis
niloticus]
Length = 419
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 135/211 (63%), Gaps = 7/211 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G ++ D P RRF VL+S +LSS TKD+V A+Q+L +G T E I
Sbjct: 156 PVDNMGAEKCYDIEAPAHVRRFQVLVSLMLSSQTKDQVTAAAMQKLRAHGC-TVENILAT 214
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ + LIYPV F+ K +K + + ++ GDIP+S++ L+ LPG+GPKMA++ M
Sbjct: 215 DDEKLGKLIYPVGFWRNKVKYLKLTSAMLQKEFGGDIPNSVEGLVRLPGVGPKMAHLAMD 274
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRLGW+ ++ T +PE+TR+AL+ WLP+E W IN LL
Sbjct: 275 IAWDQVSGIGVDTHVHRISNRLGWL-----RKATKNPEETRKALEEWLPRELWSEINWLL 329
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
VGFGQ +C P+ P C +C CPSA K S
Sbjct: 330 VGFGQQVCLPVNPLCSVCLNQHSCPSAHKNS 360
>gi|213408176|ref|XP_002174859.1| endonuclease III-like protein [Schizosaccharomyces japonicus
yFS275]
gi|212002906|gb|EEB08566.1| endonuclease III-like protein [Schizosaccharomyces japonicus
yFS275]
Length = 361
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 141/237 (59%), Gaps = 13/237 (5%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN---GLHTA 58
K + PV ++G PK R L++ +LSS TKD V ++ L +N GL T
Sbjct: 69 KIIAPVDNMGCHTLADRKDPKVFRLQTLVALMLSSQTKDTVLGPTMKNLKENMPKGL-TV 127
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E ++ DE + LI V F+ RKA +KK AKI KYDGDIP +++ L+ LPG+GPKM
Sbjct: 128 EGLEAIDEKELNILIEKVGFHNRKAMYLKKTAKILKEKYDGDIPDTIEGLMELPGVGPKM 187
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
+ + + W + GI VD HVHRI N LGWV T + EQTR ALQ WLPKE W+
Sbjct: 188 GYLCLGVAWNKIDGIGVDVHVHRISNLLGWV-------HTKTEEQTRLALQSWLPKELWL 240
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSKSKKSESSSLRKL 233
+N +LVGFGQ IC P RC +CT++E CPSAF E+S S +SKK ++ R L
Sbjct: 241 DVNHMLVGFGQMICLPRGRRCDICTLAENNLCPSAFTENSRISKQSKKGQAKDKRDL 297
>gi|157103485|ref|XP_001648002.1| endonuclease iii [Aedes aegypti]
gi|108880533|gb|EAT44758.1| AAEL003906-PA [Aedes aegypti]
Length = 396
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 135/211 (63%), Gaps = 8/211 (3%)
Query: 6 PVYSLGVDE--TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
PV ++G D+ D ++P K RR+ L+S +LSS TKD+V +QRL ++GL T E +
Sbjct: 174 PVDTMGCDQFKDDQTVPAKIRRYHTLVSLMLSSQTKDQVNFECMQRLRKHGL-TPENVVA 232
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
D A ++ LIYPV+FY KA +K+ ++I L YDGDIP ++D LL LPG+G KMA++ M
Sbjct: 233 TDVAVLEKLIYPVSFYKNKAKFIKQSSQILLDSYDGDIPDTIDGLLKLPGVGKKMAHLCM 292
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
W V GI VDTHVHRICN L WV ++T +PE TR AL++WLP E W +N L
Sbjct: 293 RSAWNVVTGIGVDTHVHRICNWLQWVP-----KQTKTPEDTRVALEKWLPFELWEEVNQL 347
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
LVGFGQTIC P C C + CP+ K
Sbjct: 348 LVGFGQTICPATNPYCNECLNATICPAKGKH 378
>gi|340716729|ref|XP_003396847.1| PREDICTED: endonuclease III-like protein 1-like [Bombus terrestris]
Length = 352
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 130/205 (63%), Gaps = 7/205 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D + K R+ L++ +LSS TKD+V A+QRL+ G + E I
Sbjct: 143 PVDEMGCHKCIDPNATAKVARYQSLIALMLSSQTKDQVTHAAMQRLISYGC-SPELISGT 201
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ T+ LIYPV F+ RK +KK +KI + KY+GDIP +L+EL LPG+GPKMA++ M
Sbjct: 202 PDDTLGKLIYPVGFWKRKVQYIKKTSKILIEKYNGDIPRTLEELCQLPGVGPKMAHICMQ 261
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRICNRLGWV +P T PE TR A++ WLPK+ W +N LL
Sbjct: 262 IAWGEVSGIGVDTHVHRICNRLGWVKKP-----TKIPEDTRIAVEEWLPKDLWSEVNYLL 316
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP 209
VGFGQ IC P P+C C + CP
Sbjct: 317 VGFGQEICLPRFPKCDECLNKDICP 341
>gi|301105551|ref|XP_002901859.1| endonuclease III, HhH-GPD superfamily base excision DNA repair,
putative [Phytophthora infestans T30-4]
gi|262099197|gb|EEY57249.1| endonuclease III, HhH-GPD superfamily base excision DNA repair,
putative [Phytophthora infestans T30-4]
Length = 287
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 134/215 (62%), Gaps = 14/215 (6%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH----TAEAIDKADEATIKDLIYPVA 77
K RF +L++ALLSS T+D + A+QRL Q G T E + E + + + PV
Sbjct: 73 KVERFQLLVAALLSSQTQDPITYAAMQRLHQLGESEEGLTIEVVQSVSEEKLSEALKPVG 132
Query: 78 FYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDT 137
FY RKA +K++A I T++ GDIP SLDELL LPGIGPK+ ++ L W V GI VDT
Sbjct: 133 FYHRKAHQLKRVAAILRTRFHGDIPRSLDELLQLPGIGPKIGRVITLLAWGQVDGIVVDT 192
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HVHR+ RLGW + T++PE TR+ L+ W+PKE W +++ ++VGFGQT+CT P
Sbjct: 193 HVHRLAQRLGWSS-------TTTPEDTRKELEDWIPKEHWGKLSLVVVGFGQTVCTAKHP 245
Query: 198 RCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLRK 232
C C ++ CPSAFK +S SKK S + +K
Sbjct: 246 SCSKCPLATKCPSAFK---VVASNSKKRTSQTNKK 277
>gi|56753569|gb|AAW24987.1| SJCHGC01733 protein [Schistosoma japonicum]
Length = 269
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/222 (47%), Positives = 133/222 (59%), Gaps = 7/222 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G ++ D + PK R VL+S +LSS TKD+V A++RL G A D
Sbjct: 51 PVDLMGCEKLADETEHPKTFRLQVLISLMLSSQTKDQVTAAAMERLKSKGCTLAMLTDMK 110
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E +++LIYPV FY KA N+KK +I KYD DIP ++ EL LPG+GPKMA + M
Sbjct: 111 TE-DLEELIYPVGFYKTKALNIKKTCEIIKQKYDSDIPKTVKELCTLPGVGPKMAYLAMK 169
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W V GI VDTHVHRI NRL W +P T +PE+TR AL+ WLP+E W IN LL
Sbjct: 170 CAWKKVTGIGVDTHVHRITNRLKWSKRP-----TKTPEETRMALEEWLPREYWDEINLLL 224
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSE 226
VGFGQ IC P+ P C C CPSA K + + K + SE
Sbjct: 225 VGFGQQICRPVNPNCMGCLNRSICPSASKLTLKNYKKKQLSE 266
>gi|392894664|ref|NP_001254906.1| Protein NTH-1, isoform d [Caenorhabditis elegans]
gi|341941198|sp|P54137.2|NTH1_CAEEL RecName: Full=Probable endonuclease III homolog; AltName:
Full=CeNTH; AltName: Full=DNA-(Apurinic or apyrimidinic
site) lyase
gi|256773103|dbj|BAI22676.1| homolog of human endonuclease III [Caenorhabditis elegans]
gi|257145792|emb|CAA90766.2| Protein NTH-1, isoform d [Caenorhabditis elegans]
Length = 298
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 143/230 (62%), Gaps = 19/230 (8%)
Query: 4 LEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
+ PV ++G + D P RF VL++ +LSS T+D+V A++RL +GL +I
Sbjct: 45 IAPVDTMGCHKLADPLAAPPVHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGL----SIG 100
Query: 63 KADEATIKDL---IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
K E + DL + PV FY RKA ++K AKI + GDIP SLD L ALPG+GPKMA
Sbjct: 101 KILEFKVPDLETILCPVGFYKRKAVYLQKTAKILKDDFSGDIPDSLDGLCALPGVGPKMA 160
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
N+VM + W GI VDTHVHRI NRLGW+ KTS+PE+T++AL+ LPK EW
Sbjct: 161 NLVMQIAWGECVGIAVDTHVHRISNRLGWI-------KTSTPEKTQKALEILLPKSEWQP 213
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSS 229
IN LLVGFGQ C P+RP+CG C CPS S+ + KS+ E+S+
Sbjct: 214 INHLLVGFGQMQCQPVRPKCGTCLCRFTCPS----STAKNVKSETEETST 259
>gi|392894666|ref|NP_001254907.1| Protein NTH-1, isoform a [Caenorhabditis elegans]
gi|293324782|emb|CBK55598.1| Protein NTH-1, isoform a [Caenorhabditis elegans]
Length = 293
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 143/230 (62%), Gaps = 19/230 (8%)
Query: 4 LEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
+ PV ++G + D P RF VL++ +LSS T+D+V A++RL +GL +I
Sbjct: 40 IAPVDTMGCHKLADPLAAPPVHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGL----SIG 95
Query: 63 KADEATIKDL---IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
K E + DL + PV FY RKA ++K AKI + GDIP SLD L ALPG+GPKMA
Sbjct: 96 KILEFKVPDLETILCPVGFYKRKAVYLQKTAKILKDDFSGDIPDSLDGLCALPGVGPKMA 155
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
N+VM + W GI VDTHVHRI NRLGW+ KTS+PE+T++AL+ LPK EW
Sbjct: 156 NLVMQIAWGECVGIAVDTHVHRISNRLGWI-------KTSTPEKTQKALEILLPKSEWQP 208
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSS 229
IN LLVGFGQ C P+RP+CG C CPS S+ + KS+ E+S+
Sbjct: 209 INHLLVGFGQMQCQPVRPKCGTCLCRFTCPS----STAKNVKSETEETST 254
>gi|170063194|ref|XP_001866998.1| endonuclease iii [Culex quinquefasciatus]
gi|167880905|gb|EDS44288.1| endonuclease iii [Culex quinquefasciatus]
Length = 361
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 137/211 (64%), Gaps = 8/211 (3%)
Query: 6 PVYSLGVDE--TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
PV S+G D+ D ++PPK RRF L+S +LSS TKD+ +QRL ++GL T E +
Sbjct: 139 PVDSMGCDQFRDDVTVPPKTRRFHTLVSLMLSSQTKDQANFECMQRLRKHGL-TPEQMVA 197
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
D ++ LI+PV+FY KA +++ + + L+ YDGDIP +++ L+ LPG+G KMA++ M
Sbjct: 198 TDVERLEKLIHPVSFYKNKAKFIRQTSALLLSTYDGDIPDTIEGLMKLPGVGAKMAHLCM 257
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
W V GI VDTHVHRI N LGWV ++T +PE+TR L+RWLP E W +N L
Sbjct: 258 GAAWNIVTGIGVDTHVHRISNWLGWVP-----RETRTPEETRLLLERWLPFELWEEVNHL 312
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
LVGFGQTICT PRC C +E CP+ K
Sbjct: 313 LVGFGQTICTSTYPRCNECGNAEICPARGKH 343
>gi|380012945|ref|XP_003690533.1| PREDICTED: endonuclease III-like protein 1-like [Apis florea]
Length = 363
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 132/219 (60%), Gaps = 9/219 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + TD K R+ LL+ +LSS TKD+V A+QRL+ G T E I
Sbjct: 152 PVDEMGCHKCTDPKATAKVARYQSLLALMLSSQTKDQVTHAAMQRLITYGC-TPEIIAGT 210
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ T+ LIYPV F+ RK +KK I + KYD DIP +L EL L G+GPKMA++ M
Sbjct: 211 PDDTLGKLIYPVGFWKRKVEYIKKTTNILIDKYDSDIPKTLKELCQLSGVGPKMAHICMQ 270
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRICNRLGWV +P T +PE TR A++ WLPK W IN LL
Sbjct: 271 IAWGEVSGIGVDTHVHRICNRLGWVKKP-----TKTPEDTRIAVEEWLPKNLWSEINYLL 325
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VGFGQ IC P P+C C + CP F +++ + K K
Sbjct: 326 VGFGQEICLPRFPKCDECLNKDICP--FTKNTKNGMKKK 362
>gi|324511601|gb|ADY44825.1| Endonuclease III-like protein 1 [Ascaris suum]
Length = 266
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 131/206 (63%), Gaps = 9/206 (4%)
Query: 6 PVYSLGVDETDSSLP-PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G L P+ RF +L+S +LSS TKD++ A+QRL G T E I +
Sbjct: 62 PVDTMGCHMLGDVLASPQVYRFQILVSLMLSSQTKDQITAAAMQRLRSRGC-TVEGIIEM 120
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E ++DL+ PV FY RKA +KK+A I KY GDIP+++++L +LPG+GPKMA++ M
Sbjct: 121 SELELQDLLIPVGFYKRKAIYLKKVADILSNKYGGDIPNTVEDLCSLPGVGPKMAHLAMQ 180
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W ++G+ VDTHVHRI NRLGWV KT +PEQTR AL+ +PKE W +N LL
Sbjct: 181 HAWGRIEGLGVDTHVHRIANRLGWV-------KTKTPEQTRVALEELIPKERWAGLNKLL 233
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPS 210
VGFGQ C P P+C C + CP+
Sbjct: 234 VGFGQQTCLPTLPKCSDCLNKDICPA 259
>gi|387015722|gb|AFJ49980.1| Endonuclease III-like protein 1-like [Crotalus adamanteus]
Length = 282
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 130/208 (62%), Gaps = 7/208 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G D PP+ +R+ +LLS +LSS T+D+V A+ RL ++GL T + I +
Sbjct: 79 PVDQMGASACFDREAPPEVKRYQILLSLMLSSQTRDQVTFAAMMRLRKHGL-TVDQILET 137
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
DE + LIYPV F+ KA +++ I Y GDIP ++ EL+ LPG+GPKMA++VM
Sbjct: 138 DEEALGRLIYPVGFWRNKARYVQQTTAILKRDYAGDIPQTVAELVKLPGVGPKMAHLVMD 197
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W GI VDTHVHRICNRL W K++T PE+TR+AL+ WLP+ W IN LL
Sbjct: 198 IAWKKASGIGVDTHVHRICNRLKWA-----KKETKLPEETRQALEEWLPRTLWSEINWLL 252
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAF 212
VGFGQ IC P+RP C C CP +
Sbjct: 253 VGFGQQICLPVRPHCSECLNRNICPGSM 280
>gi|242017392|ref|XP_002429173.1| endonuclease III, putative [Pediculus humanus corporis]
gi|212514051|gb|EEB16435.1| endonuclease III, putative [Pediculus humanus corporis]
Length = 292
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 9/209 (4%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL--LQNGLHTAEAID 62
PV ++G D+ DS PK +RF L+S +LSS TKD+V A+QRL + GL T E+I
Sbjct: 86 PVDTMGCDKCLDSECEPKVKRFHALVSLMLSSQTKDQVTFAAMQRLKNYKTGL-TIESII 144
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ + T+ +LIYPV F+ +K +K+ ++ K+DGDIP++++ L +LPG+G KMA++
Sbjct: 145 EMSDDTLGELIYPVGFWKQKTKYLKQTCQVLKEKFDGDIPNTVELLCSLPGVGLKMAHIC 204
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M W + GI VDTHVHRI NR+GWV +P T +PE+TR +L+ WLPKE W IN
Sbjct: 205 MKTAWDVISGIGVDTHVHRIANRIGWVHKP-----TKTPEETRISLESWLPKELWEEINN 259
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVGFGQ IC P +P C C +CP A
Sbjct: 260 LLVGFGQQICKPTKPLCNSCKNQPFCPYA 288
>gi|195437932|ref|XP_002066893.1| GK24310 [Drosophila willistoni]
gi|194162978|gb|EDW77879.1| GK24310 [Drosophila willistoni]
Length = 351
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 134/217 (61%), Gaps = 7/217 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D K +RF L++ +LSS TKD+ A++RL L D
Sbjct: 141 PVDTMGCHKCADQEADEKTQRFQNLVALMLSSQTKDETTFEAMKRLKARNLSPGNIKD-M 199
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ ++ L++PV+FY KA +K+ +++ L KY GDIP ++ +L+ LPG+GPKMA++ M+
Sbjct: 200 PTSELEGLLHPVSFYKNKAKYLKQTSEVLLDKYGGDIPDNVKDLIGLPGVGPKMAHICMS 259
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHRI NRLGW+ P T PEQTR L++WLPK W +N L
Sbjct: 260 VAWHKITGIGVDVHVHRISNRLGWLKTP-----TKEPEQTRLGLEKWLPKSLWSEVNHLF 314
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSK 221
VGFGQTICTP++P C C + CPSA+K + + K
Sbjct: 315 VGFGQTICTPVKPNCAQCLNRDVCPSAYKNETKTKKK 351
>gi|350421872|ref|XP_003492984.1| PREDICTED: endonuclease III-like protein 1-like [Bombus impatiens]
Length = 352
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 129/205 (62%), Gaps = 7/205 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D + K R+ L++ +LSS TKD+V A+QRL+ G T E I
Sbjct: 143 PVDEMGCHKCIDPNATAKVARYQSLIALMLSSQTKDQVTHAAMQRLITYGC-TPELISGT 201
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ T+ LIYPV F+ RK +KK +KI + KY+GDIP +L EL LPG+GPKM+++ M
Sbjct: 202 PDDTLGKLIYPVGFWKRKVQYIKKTSKILIEKYNGDIPRTLKELCQLPGVGPKMSHICMQ 261
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRICNRLGWV K+ T PE TR A++ WLPK+ W +N LL
Sbjct: 262 IAWGEVSGIGVDTHVHRICNRLGWV-----KKSTKIPEDTRIAVEEWLPKDLWSEVNYLL 316
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP 209
VGFGQ IC P P+C C + CP
Sbjct: 317 VGFGQEICLPRFPKCDECLNKDICP 341
>gi|91088451|ref|XP_968911.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
Length = 283
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 137/210 (65%), Gaps = 9/210 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G + T+ S P+ R+ LL+ +LSS TKD+V A+Q+L + G + + +
Sbjct: 76 PVDSMGCHKCTEESATPEVFRYQALLALMLSSQTKDQVVFSAMQKLHKYGCNVDNILATS 135
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
DE + +LIYPV F+ K ++KK ++I +Y+GDIP ++++L LPG+GPKMAN+ M
Sbjct: 136 DEK-LGELIYPVGFWKTKVKHIKKASEILKNEYNGDIPRTVEDLCKLPGVGPKMANLCMK 194
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W V GI VDTHVHRI NR+GWV KT +PE+T+++L+RWLP++ W I LL
Sbjct: 195 TAWNEVTGIGVDTHVHRISNRIGWV-------KTKTPEETKKSLERWLPRDLWDEIGALL 247
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
VGFGQ C P++P+CG C + CP KE
Sbjct: 248 VGFGQQTCKPVKPQCGTCLNNSVCPFGTKE 277
>gi|270011744|gb|EFA08192.1| hypothetical protein TcasGA2_TC005819 [Tribolium castaneum]
Length = 266
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 137/210 (65%), Gaps = 9/210 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G + T+ S P+ R+ LL+ +LSS TKD+V A+Q+L + G + + +
Sbjct: 59 PVDSMGCHKCTEESATPEVFRYQALLALMLSSQTKDQVVFSAMQKLHKYGCNVDNILATS 118
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
DE + +LIYPV F+ K ++KK ++I +Y+GDIP ++++L LPG+GPKMAN+ M
Sbjct: 119 DEK-LGELIYPVGFWKTKVKHIKKASEILKNEYNGDIPRTVEDLCKLPGVGPKMANLCMK 177
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W V GI VDTHVHRI NR+GWV KT +PE+T+++L+RWLP++ W I LL
Sbjct: 178 TAWNEVTGIGVDTHVHRISNRIGWV-------KTKTPEETKKSLERWLPRDLWDEIGALL 230
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
VGFGQ C P++P+CG C + CP KE
Sbjct: 231 VGFGQQTCKPVKPQCGTCLNNSVCPFGTKE 260
>gi|383858638|ref|XP_003704806.1| PREDICTED: endonuclease III-like protein 1-like [Megachile
rotundata]
Length = 394
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 126/209 (60%), Gaps = 7/209 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D K RF L++ +LSS TKD+V A+QRL G T E +
Sbjct: 186 PVDEMGCHKCADPKASAKVIRFQSLVALMLSSQTKDQVTHAAMQRLNAYGC-TPEMLRDT 244
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + LIYPV F+ RK +KK A I + KYD DIP +L EL LPG+GPKM+++ M
Sbjct: 245 PDDVLGKLIYPVGFWKRKVIYIKKTAGILIDKYDSDIPRTLKELCELPGVGPKMSHICMQ 304
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRICNR+GWV +P T +PEQTR A++ WLPK W +N LL
Sbjct: 305 IAWGEVSGIGVDTHVHRICNRMGWVKKP-----TKTPEQTRTAVEEWLPKNLWSEVNHLL 359
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
VGFGQ IC P P+C C CP + K
Sbjct: 360 VGFGQEICLPRFPKCNECLNRNICPFSTK 388
>gi|321475198|gb|EFX86161.1| hypothetical protein DAPPUDRAFT_193197 [Daphnia pulex]
Length = 306
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G ++ DS+ P+ +RF VL+S +LSS TKD++ A+++L ++GL T E +
Sbjct: 100 PVDQMGAEQCADSASSPEVKRFQVLVSLMLSSQTKDQLTYAAMEKLKKHGL-TVENVINT 158
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
DE I +LI+PV F+ +KA +K+ A I +Y+ DIP +++EL LPG+G KMA + +
Sbjct: 159 DEKVIANLIHPVGFWKKKASYIKRTAVILAAQYNNDIPQTVEELCKLPGVGQKMAVLTVN 218
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+GW GI VDTHVHRI NRLGW +P T +PE T++ L+ WLP+ W +N LL
Sbjct: 219 IGWKKTIGIGVDTHVHRIANRLGWTRRP-----TKTPENTQKELEDWLPRSLWDEVNILL 273
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP 209
VGFGQ CTP++P+C C CP
Sbjct: 274 VGFGQQRCTPIKPQCSTCLNKNLCP 298
>gi|256071646|ref|XP_002572150.1| endonuclease III [Schistosoma mansoni]
gi|353229188|emb|CCD75359.1| putative endonuclease III [Schistosoma mansoni]
Length = 260
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 126/209 (60%), Gaps = 7/209 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G + D + PK R VL+S +LSS TKD+V A++RL G T +
Sbjct: 50 PVDSMGCERLADETEHPKTFRLQVLISLMLSSQTKDQVTSAAMERLKLRGC-TLTTLTSM 108
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
++DLIYPV FY KA N+KK +I KY+ DIP +++EL LPG+GPKMA + M
Sbjct: 109 KTGELQDLIYPVGFYKTKALNIKKTCEILKEKYNSDIPETVEELCTLPGVGPKMAYLAMQ 168
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W V GI VDTHVHRI NRL W +P T +PE+TR A++ W P+E W IN LL
Sbjct: 169 CAWKKVTGIGVDTHVHRIVNRLKWCKKP-----TKTPEETRLAIEEWFPREHWDEINWLL 223
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
VGFGQ IC P+ P C C CPSA K
Sbjct: 224 VGFGQQICRPVNPNCKECLNLSICPSASK 252
>gi|195148504|ref|XP_002015213.1| GL19581 [Drosophila persimilis]
gi|194107166|gb|EDW29209.1| GL19581 [Drosophila persimilis]
Length = 396
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 133/207 (64%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D++ K +RF L++ +LSS TKD+ A+ RL L T +++
Sbjct: 184 PVDTMGCHQCADTTADFKTQRFHKLVALMLSSQTKDQTTYEAMTRLKARTL-TPDSLKDM 242
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
++ L++PV+FY KA +K+ +I + KYD DIP+++ EL+ALPG+GPKMA++ M
Sbjct: 243 PIGELETLLHPVSFYKNKAKYLKQTTQILIDKYDSDIPNNVKELIALPGVGPKMAHICMA 302
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHRI NRLGW+ +P T PEQTR AL+ WLP W +N L
Sbjct: 303 VAWDKLTGIGVDVHVHRISNRLGWLPRP-----TKEPEQTRVALESWLPSTLWAEVNHLF 357
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQT+CTPL+P CG C + CPSA
Sbjct: 358 VGFGQTVCTPLKPNCGQCLNKDICPSA 384
>gi|328777513|ref|XP_623602.3| PREDICTED: endonuclease III-like protein 1-like [Apis mellifera]
Length = 354
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 132/219 (60%), Gaps = 9/219 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + TD K R+ L++ +LSS TKD+V A+QRL+ G T E I
Sbjct: 143 PVDEMGCHKCTDPKATAKVARYQSLIALMLSSQTKDQVTHAAMQRLITYGC-TPEIIAGT 201
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ T+ LIYPV F+ RK +KK I + KYD DIP +L EL L G+GPKMA++ M
Sbjct: 202 PDDTLGKLIYPVGFWKRKVEYIKKTTTILIDKYDSDIPKTLKELCQLSGVGPKMAHICMQ 261
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRICNRLGWV +P T +PE TR A++ WLP+ W IN LL
Sbjct: 262 IAWGEVSGIGVDTHVHRICNRLGWVKKP-----TKTPEDTRIAVEEWLPRNLWSEINYLL 316
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VGFGQ IC P P+C C + CP F +++ + K K
Sbjct: 317 VGFGQEICLPRFPKCDECLNKDICP--FTKNTKNGMKEK 353
>gi|198474869|ref|XP_002132792.1| GA26017 [Drosophila pseudoobscura pseudoobscura]
gi|198138583|gb|EDY70194.1| GA26017 [Drosophila pseudoobscura pseudoobscura]
Length = 396
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 132/207 (63%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D++ K +RF L++ +LSS TKD+ A+ RL L T +++
Sbjct: 184 PVDTMGCHQCADTTADFKTQRFQKLVALMLSSQTKDQTTYEAMNRLKARTL-TPDSLKDM 242
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
++ L++PV+FY KA +K+ +I + KYD DIP++ EL+ALPG+GPKMA++ M
Sbjct: 243 PIGELETLLHPVSFYKNKAKYLKQTTQILIDKYDSDIPNNAKELIALPGVGPKMAHICMA 302
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHRI NRLGW+ +P T PEQTR AL+ WLP W +N L
Sbjct: 303 VAWDKLTGIGVDVHVHRISNRLGWLPRP-----TKEPEQTRVALESWLPSTLWAEVNHLF 357
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQT+CTPL+P CG C + CPSA
Sbjct: 358 VGFGQTVCTPLKPNCGQCLNKDICPSA 384
>gi|443717727|gb|ELU08655.1| hypothetical protein CAPTEDRAFT_25579, partial [Capitella teleta]
Length = 231
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 132/212 (62%), Gaps = 9/212 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D TD P+E R+ +LLS +LSS T+D+V A+ +L Q+G + +
Sbjct: 25 PVDTMGCDVITDQKASPQEYRYQILLSLMLSSQTRDQVTSAAMMKLRQHGCSIDSILATS 84
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
DE + +LIYP F+ RK +KK +KI + + DIP++++ L +LPG+GPKMA++VM
Sbjct: 85 DEK-LGELIYPAGFWKRKVEYIKKTSKILKSDFSMDIPNTVEGLCSLPGVGPKMAHLVMK 143
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W + GI VDTHVHRICNRL WV KT PE+TR L+ WLP++ WV IN LL
Sbjct: 144 SAWGEISGIGVDTHVHRICNRLDWV-------KTKQPEETRVELEEWLPRDLWVDINALL 196
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESS 216
VGFGQTIC P+ P C C CP + S
Sbjct: 197 VGFGQTICRPVGPDCFSCLNKNICPVGKTQKS 228
>gi|195351989|ref|XP_002042498.1| GM23290 [Drosophila sechellia]
gi|194124367|gb|EDW46410.1| GM23290 [Drosophila sechellia]
Length = 378
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 132/219 (60%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D K +RF L++ +LSS TKD+ A+ RL GL T + +
Sbjct: 166 PVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAMNRLKDRGL-TPLKVKEM 224
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +K+ I + KY DIP ++ +L+ALPG+GPKMA++ M
Sbjct: 225 PVTELENLLHPVSFYKNKAKYLKQTVDILMDKYGSDIPDNVKDLVALPGVGPKMAHICMA 284
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHR+ NRLGWV +P T PEQTR AL++WLP W +N L
Sbjct: 285 VAWNKITGIGVDVHVHRLSNRLGWVPKP-----TKEPEQTRVALEKWLPFSLWSEVNHLF 339
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VGFGQTICTP++P CG C E CPSA E K +
Sbjct: 340 VGFGQTICTPVKPNCGECLNKEICPSAHAEIKEKKKKDR 378
>gi|347967756|ref|XP_312566.5| AGAP002388-PA [Anopheles gambiae str. PEST]
gi|333468315|gb|EAA08063.5| AGAP002388-PA [Anopheles gambiae str. PEST]
Length = 461
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 137/212 (64%), Gaps = 11/212 (5%)
Query: 4 LEPVYSLGVDETD-----SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA 58
L PV ++G D+ + +P + +R+ L+S +LSS TKDK + RL ++GL T
Sbjct: 234 LAPVDTMGCDQFTQDPGATEVPDRVKRYHCLVSLILSSQTKDKANHECMLRLKKHGL-TP 292
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E+I D A ++ LIYPV FY K +K++++I + +Y GDIP+S++ LL LPG+G KM
Sbjct: 293 ESIVATDSAVLQKLIYPVGFYKNKTRFIKEMSQILIDQYGGDIPNSIEGLLKLPGVGTKM 352
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A++ M W V GI VDTHVHRI N L WV ++T +PE TR+AL++WLP E W
Sbjct: 353 AHLCMRSAWNIVTGIGVDTHVHRIANWLKWVP-----KETKNPENTRQALEKWLPYELWD 407
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
+N LLVGFGQTICTP PRC C+ + CP+
Sbjct: 408 EVNHLLVGFGQTICTPRFPRCNDCSNAPICPA 439
>gi|194878547|ref|XP_001974085.1| GG21536 [Drosophila erecta]
gi|190657272|gb|EDV54485.1| GG21536 [Drosophila erecta]
Length = 383
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 132/208 (63%), Gaps = 7/208 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D K +RF L++ +LSS TKD+ A+ RL ++ T + +
Sbjct: 181 PVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAMNRL-KDRSPTPLQVKEM 239
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +K+ +I + KYD DIP ++ +L+ALPG+GPKMA++ M
Sbjct: 240 PVTELENLLHPVSFYKNKAKYLKQTVEILIDKYDSDIPDNVKDLIALPGVGPKMAHICMA 299
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHR+CNRLGWV +P T PEQTR AL++WLP W +N L
Sbjct: 300 VAWNKITGIGVDVHVHRLCNRLGWVPKP-----TKEPEQTRVALEKWLPFSLWSEVNHLF 354
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAF 212
VGFGQTICTP++P CG C + CPSA
Sbjct: 355 VGFGQTICTPVKPNCGECLNKDICPSAH 382
>gi|291226292|ref|XP_002733128.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 318
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 137/221 (61%), Gaps = 9/221 (4%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + T D+++ P R+ +L+S +LSS TKD+V A+ RL +GL T I K
Sbjct: 106 PVDTMGCERTADTAVGPAVYRYQILVSLMLSSQTKDQVTSAAMDRLKTHGL-TISNILKT 164
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + +LIYPV F+ RK +KK + + ++YD DIPS++ EL LPG+GPKMA + M
Sbjct: 165 SDKKLGELIYPVGFWKRKVEYIKKTSTLLESQYDNDIPSTISELCQLPGVGPKMAYLCMN 224
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W GI VDTHVHRI NRL WV K T +PE TR+ LQ WLP+ W+ IN LL
Sbjct: 225 IAWHQTTGIGVDTHVHRISNRLKWV-----KSTTKTPEDTRKILQEWLPRSLWIEINWLL 279
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKS 225
VGFGQ IC + P+C C + C F +++ S K K++
Sbjct: 280 VGFGQQICLSVSPKCQQCLNNHTC--LFGKANLQSKKKKRN 318
>gi|195999308|ref|XP_002109522.1| hypothetical protein TRIADDRAFT_21050 [Trichoplax adhaerens]
gi|190587646|gb|EDV27688.1| hypothetical protein TRIADDRAFT_21050 [Trichoplax adhaerens]
Length = 292
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 132/207 (63%), Gaps = 9/207 (4%)
Query: 6 PVYSLGVDE---TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
PV ++G E S+ + +R+ +L+S +LSS TKD++ A+ RL +GL T + +
Sbjct: 86 PVDTMGCSELSDRSESVEVRVQRYQILISLMLSSQTKDQITAAAMHRLKNHGL-TMDNVM 144
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ + +LI+PV F+ RK +K+ + + KY+ DIP +LDEL ALPGIGPKMA+++
Sbjct: 145 ATSDKQLGELIFPVGFWQRKVQYIKRTTAMLIEKYNKDIPPTLDELKALPGIGPKMAHLI 204
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M W +V GI VDTHVHRI NRL WV +P T+ PE+TR AL+ WLP+ EW IN
Sbjct: 205 MLSAWNSVVGIGVDTHVHRISNRLKWVKKP-----TTDPEKTRIALEEWLPRNEWREINC 259
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCP 209
L+VGFGQTIC P+ P C C CP
Sbjct: 260 LMVGFGQTICLPINPLCDNCLNKPICP 286
>gi|195580555|ref|XP_002080101.1| GD21665 [Drosophila simulans]
gi|194192110|gb|EDX05686.1| GD21665 [Drosophila simulans]
Length = 388
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 132/219 (60%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D K +RF L++ +LSS TKD+ A+ RL GL T + +
Sbjct: 176 PVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAMNRLKDRGL-TPLKVKEM 234
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +K+ I + KY DIP ++ +L+ALPG+GPKMA++ M
Sbjct: 235 PVTELENLLHPVSFYKNKAKYLKQTVDILMDKYGSDIPDNVKDLVALPGVGPKMAHICMA 294
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHR+ NRLGWV +P T PEQTR AL++WLP W +N L
Sbjct: 295 VAWNKITGIGVDVHVHRLSNRLGWVPKP-----TKEPEQTRVALEKWLPFSLWSEVNHLF 349
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VGFGQTICTP++P CG C + CPSA E K +
Sbjct: 350 VGFGQTICTPVKPNCGECLNKDICPSAHAEIKEKKKKDR 388
>gi|40714570|gb|AAR88543.1| RE40459p [Drosophila melanogaster]
Length = 391
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 132/217 (60%), Gaps = 7/217 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D K +RF L++ +LSS TKD+ A+ RL GL T + +
Sbjct: 181 PVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDRTTYEAMNRLKDRGL-TPLKVKEM 239
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +K+ +I KY DIP ++ +L+ALPG+GPKMA++ M
Sbjct: 240 PVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVKDLVALPGVGPKMAHICMA 299
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHR+ NRLGWV +P T PEQTR AL++WLP W +N L
Sbjct: 300 VAWNKITGIGVDVHVHRLSNRLGWVPKP-----TKEPEQTRVALEKWLPFSLWSEVNHLF 354
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSK 221
VGFGQTICTP++P CG C + CPSA E+ K
Sbjct: 355 VGFGQTICTPVKPNCGECLNKDICPSAHAETKEKKKK 391
>gi|45550361|ref|NP_610078.2| CG9272 [Drosophila melanogaster]
gi|45445193|gb|AAF53949.2| CG9272 [Drosophila melanogaster]
Length = 388
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 133/219 (60%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D K +RF L++ +LSS TKD+ A+ RL GL T + +
Sbjct: 176 PVDTMGCHRCADLKADSKTQRFQNLVALMLSSQTKDQTTYEAMNRLKDRGL-TPLKVKEM 234
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +K+ +I KY DIP ++ +L+ALPG+GPKMA++ M
Sbjct: 235 PVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVKDLVALPGVGPKMAHICMA 294
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHR+ NRLGWV +P T PEQTR AL++WLP W +N L
Sbjct: 295 VAWNKITGIGVDVHVHRLSNRLGWVPKP-----TKEPEQTRVALEKWLPFSLWSEVNHLF 349
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VGFGQTICTP++P CG C + CPSA E+ K +
Sbjct: 350 VGFGQTICTPVKPNCGECLNKDICPSAHAETKEKRKKDR 388
>gi|195475998|ref|XP_002090269.1| GE13013 [Drosophila yakuba]
gi|194176370|gb|EDW89981.1| GE13013 [Drosophila yakuba]
Length = 387
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 130/208 (62%), Gaps = 7/208 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D PK +RF L++ +LSS TKD+ A+ RL L T + +
Sbjct: 181 PVDTMGCHRCADLKADPKTQRFQNLVALMLSSQTKDQTTYEAMNRLKDRSL-TPLKVKEM 239
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +K +I + KYD DIP+++ EL+ALPG+GPKMA++ M
Sbjct: 240 PVTELENLLHPVSFYKNKAKYLKLTVEILIDKYDSDIPNNVKELVALPGVGPKMAHICMA 299
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + GI VD HVHR+ NRLGWV +P T PEQTR AL++WLP W +N L
Sbjct: 300 VAWNKITGIGVDVHVHRLSNRLGWVPKP-----TKEPEQTRVALEKWLPFSLWSEVNHLF 354
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAF 212
VGFGQTICTP++P C C + CPSA
Sbjct: 355 VGFGQTICTPVKPNCVECLNKDICPSAH 382
>gi|195030160|ref|XP_001987936.1| GH10834 [Drosophila grimshawi]
gi|193903936|gb|EDW02803.1| GH10834 [Drosophila grimshawi]
Length = 373
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 137/220 (62%), Gaps = 8/220 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +LG + D + K +RF L++ +LSS TKD+ A++RL L T ++
Sbjct: 157 PVDTLGCHQCADINADAKTQRFHKLVALMLSSQTKDETTFEAMKRLKAQTL-TPASMQSM 215
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+++L++PV+FY KA +KK ++I + KY+ DIP ++ ELL LPG+GPKMA++ M
Sbjct: 216 PVGVLENLLHPVSFYKNKAKYLKKTSQILVDKYNEDIPDNIPELLKLPGVGPKMAHICMA 275
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W + GI VDTHVHRI NRL W++ + T PEQTR L+ WLP++ W +N L
Sbjct: 276 TAWNQITGIGVDTHVHRIANRLAWLS-----KSTKEPEQTRIQLETWLPRQLWAEVNHLF 330
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP-SAFKESSTSSSKSK 223
VGFGQT+CTPLRP C C + CP SA + S SK+K
Sbjct: 331 VGFGQTVCTPLRPNCSECLNRDICPASALAKKSEPKSKTK 370
>gi|194766301|ref|XP_001965263.1| GF24230 [Drosophila ananassae]
gi|190617873|gb|EDV33397.1| GF24230 [Drosophila ananassae]
Length = 395
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 7/211 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D++ K +RF L++ +LSS TKD+ A+ RL + L + + ++
Sbjct: 183 PVDTMGCHKCADATADAKTQRFQNLVALMLSSQTKDQTTFEAMNRLKERDL-SPQTLNDM 241
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
++ L++PV+FY KA +K+ +I + KYD DIP + EL ALPG+GPKMA++ M
Sbjct: 242 PVEELEGLLHPVSFYKNKAKYLKQTVQILIEKYDSDIPDTPKELKALPGVGPKMAHICMA 301
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VD HVHR+ NRL WV +P T PEQTR AL++WLP W + PLL
Sbjct: 302 VAWNKVTGIGVDVHVHRLSNRLKWVPRP-----TKEPEQTRVALEKWLPYSLWSEVTPLL 356
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
VGFGQTICTPL+P C C + CPSA E+
Sbjct: 357 VGFGQTICTPLKPNCRECLNKDICPSANIEA 387
>gi|157864920|ref|XP_001681168.1| putative endonuclease III [Leishmania major strain Friedlin]
gi|68124463|emb|CAJ02303.1| putative endonuclease III [Leishmania major strain Friedlin]
Length = 257
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/233 (43%), Positives = 137/233 (58%), Gaps = 12/233 (5%)
Query: 6 PVYSLGVDETDSSLPPKE-RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G PKE +RF L++ +LS+ TKD V A+ L++ L T +++
Sbjct: 29 PVDTMGCHRLRDETAPKEVQRFHTLVALMLSAQTKDVVTAAAMDTLIKREL-TVQSVHAM 87
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E + I V F+ KA N+K++A I + YDG +P EL+ALPG+GPKMAN+
Sbjct: 88 TETELDKHICKVGFHNTKARNIKEVAAILMKNYDGKVPREYAELIALPGVGPKMANLFFQ 147
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T +PE TR+AL+ WLP+E W IN L+
Sbjct: 148 DADHRVIGIGVDTHVHRISQRYRWV--PST---VKTPEDTRKALESWLPREHWGTINSLM 202
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK-----KSESSSLRK 232
VG GQT+CTPLRP+C +C +S+ CP+AFKE ++K K E S RK
Sbjct: 203 VGLGQTVCTPLRPKCDICELSDICPNAFKERRQKRLRAKAPLMEKEEPVSHRK 255
>gi|307185012|gb|EFN71241.1| Endonuclease III-like protein 1 [Camponotus floridanus]
Length = 349
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 124/207 (59%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D + P R+ L++ +LSS TKD+V A+QRL G + I
Sbjct: 139 PVDDMGCHKCADPNASPSVSRYQSLIALMLSSQTKDQVTHAAMQRLNTYGCK-PDIIAAT 197
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + LIYPV F+ RK +KK + I L KYDGDIP ++ EL LPG+GPKM ++ M
Sbjct: 198 PDDVLGKLIYPVGFWKRKVEYIKKTSVILLDKYDGDIPKTIKELCELPGVGPKMGHICMQ 257
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRICNRL W+ +P T +PE+TR L+ WLPK W +IN LL
Sbjct: 258 IAWGEVSGIGVDTHVHRICNRLEWMKKP-----TKTPEETRNELEDWLPKSLWSKINYLL 312
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ IC P P+C C CP A
Sbjct: 313 VGFGQEICLPRFPKCDECLNKNICPYA 339
>gi|198413061|ref|XP_002124717.1| PREDICTED: similar to predicted protein, partial [Ciona
intestinalis]
Length = 183
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/189 (49%), Positives = 122/189 (64%), Gaps = 7/189 (3%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E+RF +L+S +LSS TKD V A+ RL+++GL I +DE + LIYPV F+ +K
Sbjct: 1 EKRFHILVSLMLSSQTKDHVTFAAMSRLIEHGLTIDYIIGTSDEK-LGSLIYPVGFWKKK 59
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
+K+ + ++ GDIP ++ L+ LPG+GPKMA + MT W V GI VD HVHR+
Sbjct: 60 VGYLKRACIMMKEEFGGDIPKCVESLVKLPGVGPKMAYLTMTCAWGIVVGIGVDVHVHRV 119
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
CNRLGWV GTKQ PEQTR LQ+WLP+E W IN LLVGFGQ +C P+ P+C C
Sbjct: 120 CNRLGWVQ--GTKQ----PEQTRLQLQQWLPRENWREINSLLVGFGQQVCLPVAPKCQEC 173
Query: 203 TVSEYCPSA 211
CPSA
Sbjct: 174 LNKNICPSA 182
>gi|426200726|gb|EKV50650.1| hypothetical protein AGABI2DRAFT_63644 [Agaricus bisporus var.
bisporus H97]
Length = 370
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 139/234 (59%), Gaps = 10/234 (4%)
Query: 6 PVYSLGVDETDS-SLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAID 62
PV +G D+ PK RRFA L+S +LSS TKD+V D A+ +L G + EAI
Sbjct: 98 PVDKMGCDQAQHKESDPKNRRFATLVSLMLSSQTKDEVTDAAVTKLRAAVGGTLSVEAII 157
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
ADE+ + + I V F+ RK +K+ A++ +D D+P ++DEL +LPG+GPKMA +
Sbjct: 158 AADESVMSEAINKVGFWRRKTGYIKRAAQMLHDDFDSDVPKTVDELCSLPGVGPKMAFLA 217
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ + W GI VD HVHRI NRLGW +P T +PE+TR LQ WLP E IN
Sbjct: 218 LQVAWDLNHGIGVDVHVHRITNRLGWHQKP-----TKNPEETRLNLQSWLPTEFHREINH 272
Query: 183 LLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSKSKKSESSSLRKLE 234
+LVGFGQ IC P+ PRC MC +S CPSA K +S K +S + K+E
Sbjct: 273 MLVGFGQVICLPVGPRCDMCNLSTNGLCPSAQKVVKSSKRKVVVLDSPAKVKVE 326
>gi|348684342|gb|EGZ24157.1| hypothetical protein PHYSODRAFT_478985 [Phytophthora sojae]
Length = 278
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 125/196 (63%), Gaps = 11/196 (5%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH----TAEAIDKADEATIKDLIYPVA 77
K RF +L++ALLSS T+D + A+QRL Q G + T E + E + +++ PV
Sbjct: 74 KVERFQLLVAALLSSQTQDPITYAAMQRLHQLGENVEGLTIETLLATSEEELSEVLKPVG 133
Query: 78 FYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDT 137
FY RKA +K++A I T++ GDIP SLDEL LPGIGPK+ ++ L W +V GI VDT
Sbjct: 134 FYHRKAQQLKRVAAILRTQFHGDIPRSLDELQQLPGIGPKIGRVITLLAWGHVDGIVVDT 193
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HVHR+ RLGW + TS+PE TR L+ W+P+E W +++ +VGFGQT+CT P
Sbjct: 194 HVHRLAQRLGWAS-------TSTPEDTRRELEDWIPREHWGKLSLAVVGFGQTVCTAKHP 246
Query: 198 RCGMCTVSEYCPSAFK 213
C C ++ CPSAFK
Sbjct: 247 SCSSCPLAPKCPSAFK 262
>gi|401416385|ref|XP_003872687.1| putative endonuclease III [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488912|emb|CBZ24161.1| putative endonuclease III [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 258
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/219 (44%), Positives = 133/219 (60%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDETDSSLPPKE-RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G PKE +RF L++ +LS+ TKD V A+ L++ GL TA+++
Sbjct: 29 PVDTMGCHRLRDENAPKEVQRFHTLVALMLSAQTKDVVTAAAMDALIKRGL-TAQSVHAM 87
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E + I V F+ KA N+K++A I + YDG +P E++ALPG+GPKMAN+
Sbjct: 88 TERELDKHICKVGFHNTKARNIKEVAAILMKDYDGKVPREYAEVIALPGVGPKMANLFFQ 147
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T +PE TR+AL+ WLP E W IN L+
Sbjct: 148 DADHRVIGIGVDTHVHRISQRYRWV--PST---VKTPEDTRKALESWLPLEHWGTINSLM 202
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VG GQT+CTPLRP+C +C +S CP+AFKE+ ++K
Sbjct: 203 VGLGQTVCTPLRPKCDICELSGICPNAFKETQQKRLRAK 241
>gi|195115659|ref|XP_002002374.1| GI17349 [Drosophila mojavensis]
gi|193912949|gb|EDW11816.1| GI17349 [Drosophila mojavensis]
Length = 341
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 131/208 (62%), Gaps = 7/208 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D++ K +RF +L+ +LSS TKD+ A+ RL L A D
Sbjct: 135 PVDTMGCHKCADANANEKTQRFHILVGLILSSQTKDETTFEAMNRLKAQTLTPARLKDLP 194
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E ++ L++PV+FY KA +K+ ++I + KY+ DIP+++ ELL LPG+GPKMA++ M
Sbjct: 195 VEE-LERLLHPVSFYKNKAKYLKQTSEILVDKYNEDIPNNIKELLKLPGVGPKMAHICMA 253
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W + GI VDTHVHRI NRL W+ +P T PEQTR L+ WLP+ W +N LL
Sbjct: 254 TAWQEITGIGVDTHVHRIANRLAWLKKP-----TKEPEQTRIQLESWLPRPLWAEVNHLL 308
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAF 212
VGFGQTICTP++P C C + CP+A
Sbjct: 309 VGFGQTICTPVKPNCSECLNKDICPAAL 336
>gi|405957861|gb|EKC24039.1| Endonuclease III-like protein 1 [Crassostrea gigas]
Length = 259
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 133/215 (61%), Gaps = 7/215 (3%)
Query: 7 VYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
V S+G D +D+ P+ R+ VLLS +LSS TKD++ A+++L ++G + +D
Sbjct: 38 VDSMGCDVISDTLASPEVFRYQVLLSLMLSSQTKDQITSAAMEKLREHGCSIDNILQTSD 97
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
+ + +LIYPV F+ +K +K+ +KI +Y+GDIP ++++L LPG+GPKMA +VM
Sbjct: 98 KE-LGELIYPVGFWKKKVEYIKRTSKILQEEYNGDIPDTVEKLCKLPGVGPKMAYLVMKC 156
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W + GI VDTHVHRI NRLGWV +P T PE TR+ LQ WLP+E W I+ LLV
Sbjct: 157 AWNQIVGIGVDTHVHRISNRLGWVKKP-----TKQPEDTRKELQDWLPREYWRDIDELLV 211
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSS 220
GFGQ C P+ P+C C E CP SS
Sbjct: 212 GFGQQTCLPVGPKCYECLNKEICPVGKSNKKMPSS 246
>gi|195385699|ref|XP_002051542.1| GJ16118 [Drosophila virilis]
gi|194147999|gb|EDW63697.1| GJ16118 [Drosophila virilis]
Length = 353
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 7/207 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +LG + D + K +RF L++ +LSS TKD+ A++RL L T +I
Sbjct: 145 PVDTLGCHQCADQNANEKTQRFHKLVALMLSSQTKDETTFEAMKRLKAQTL-TPASIQGM 203
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
++ L++PV+FY KA +K+ ++I + KY+ DIP ++ ELL LPG+GPKMA++ M
Sbjct: 204 PAVELERLLHPVSFYKNKAKYLKQTSQILVDKYNEDIPDNIQELLKLPGVGPKMAHICMA 263
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W + GI VDTHVHRI NRL W+ K+ T PEQTR L+ WLP+ W +N LL
Sbjct: 264 TAWNKITGIGVDTHVHRIANRLAWL-----KKSTKEPEQTRVQLESWLPRPLWSEVNHLL 318
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQTICTP+RP C C CP++
Sbjct: 319 VGFGQTICTPVRPNCSECLNRHICPAS 345
>gi|449303226|gb|EMC99234.1| hypothetical protein BAUCODRAFT_31576 [Baudoinia compniacensis UAMH
10762]
Length = 437
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 134/216 (62%), Gaps = 12/216 (5%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHTA 58
+ L PV ++G + + PP++RR L+S +LSS TKD V A++ L QN G
Sbjct: 162 RVLAPVDTMGCESLAEDHKPPRDRRLQTLVSLMLSSQTKDTVTAVAMRNLQQNLPGGFCL 221
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E++ K + + +LI V F+ K +KK+A I +YDGDIP +++ L++LPG+GPKM
Sbjct: 222 ESLLKVEPEQLNELIGKVGFHNNKTTFIKKVAVILRDQYDGDIPDTIEGLVSLPGVGPKM 281
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + M+ W +GI VD HVHRI N GW KTS+PEQTR L+ WLP+++W
Sbjct: 282 AYLCMSAAWGRDEGIGVDVHVHRITNLWGW-------HKTSTPEQTRAELEAWLPRDKWH 334
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAF 212
IN LLVGFGQTIC P+ RCG C +++ CPSA
Sbjct: 335 DINHLLVGFGQTICVPVGRRCGECDLAKEGLCPSAV 370
>gi|449682785|ref|XP_002164144.2| PREDICTED: endonuclease III-like protein 1-like [Hydra
magnipapillata]
Length = 320
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 129/208 (62%), Gaps = 9/208 (4%)
Query: 7 VYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
V S G + T D P+ +R+ L+S +LSS TKD V A+ RL ++GL T +I +
Sbjct: 118 VDSYGCERTADERESPEVKRYQTLISLMLSSQTKDGVTFAAMDRLKKHGL-TIPSIFETS 176
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E+ I++LIYPV F+ +KA +K IC K++ DIP+SL LL+LPG+GPKMA++ M
Sbjct: 177 ESVIEELIYPVGFWKKKAAFIKNATAICHDKFNNDIPNSLQGLLSLPGVGPKMAHICMNA 236
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W V GI VDTHVHRI NRL WV T PE+TR L+ LP+ EW IN LLV
Sbjct: 237 AWGVVTGIGVDTHVHRIANRLKWVN-------TKKPEETRNCLEALLPRCEWDDINILLV 289
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFK 213
GFGQ C P+ P+C C + CPS+ K
Sbjct: 290 GFGQQTCLPVNPKCISCLNYDICPSSTK 317
>gi|409082857|gb|EKM83215.1| hypothetical protein AGABI1DRAFT_69456 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 383
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 131/221 (59%), Gaps = 10/221 (4%)
Query: 6 PVYSLGVDETDS-SLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAID 62
PV +G D+ PK RRFA L+S +LSS TKD+V D A+ +L G + EA+
Sbjct: 111 PVDKMGCDQAQHKESDPKNRRFATLVSLMLSSQTKDEVTDAAVTKLRAAVGGTLSVEAVI 170
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
ADE+ + + I V F+ RK +K+ ++ +D D+P ++DEL +LPG+GPKMA +
Sbjct: 171 AADESVMSEAINKVGFWRRKTGYIKRATQMLHDDFDSDVPKTVDELCSLPGVGPKMAFLA 230
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ + W GI VD HVHRI NRLGW +P T +PE+TR LQ WLP E IN
Sbjct: 231 LQVAWDLNHGIGVDVHVHRITNRLGWHQKP-----TKNPEETRLNLQSWLPTEFHREINH 285
Query: 183 LLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSK 221
+LVGFGQ IC P+ PRC MC +S CPSA K S K
Sbjct: 286 MLVGFGQVICLPVGPRCDMCDLSTKGLCPSAQKAVKRSKRK 326
>gi|126652805|ref|XP_001388380.1| endonuclease III [Cryptosporidium parvum Iowa II]
gi|126117473|gb|EAZ51573.1| endonuclease III, putative [Cryptosporidium parvum Iowa II]
Length = 189
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 128/197 (64%), Gaps = 8/197 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
RF VL++A LSS TKD+V + RL+ NGL + E I+ +++D++Y V FY KA
Sbjct: 1 RFHVLVAAFLSSQTKDEVTAACMNRLIDNGL-SPEFINNQSVDSLRDMLYGVGFYNTKAK 59
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
N+K+I++I + Y G +P ++L+ LPGIGPKMAN+++ +G+ V GI VDTH+HRI N
Sbjct: 60 NLKEISRIIIQNYSGKVPEKYEQLVMLPGIGPKMANLILQIGFGIVVGISVDTHMHRIFN 119
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
R+GWV KT +P +T + +++ LP+ W IN + VG+GQTIC P+ P+C C +
Sbjct: 120 RIGWV-------KTKNPIETSKEMEKMLPRIYWNDINKVFVGYGQTICKPINPKCQECNI 172
Query: 205 SEYCPSAFKESSTSSSK 221
+YC K +S+K
Sbjct: 173 RDYCSHGMKWKKKASTK 189
>gi|290983237|ref|XP_002674335.1| predicted protein [Naegleria gruberi]
gi|284087925|gb|EFC41591.1| predicted protein [Naegleria gruberi]
Length = 316
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/191 (48%), Positives = 125/191 (65%), Gaps = 8/191 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G DS+ K +RF VL+S +LSS TKD++ A+++L +N + + ++K
Sbjct: 114 PVDTMGCSVLADSNADEKTQRFQVLVSLMLSSQTKDQITAAAVRKLQENNVLSVAEMNKL 173
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E I+DLIYPV FY RK+ +KK+ KI L KYD DIP ++ EL LPG+GPKMA + M+
Sbjct: 174 SEKEIQDLIYPVGFYKRKSTYLKKVCKILLEKYDSDIPKTVKELCDLPGVGPKMAYLCMS 233
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
GI VDTHVHRI NRL WV T +PEQTR L+ ++P+EEW IN +L
Sbjct: 234 SALKQTVGIGVDTHVHRISNRLEWVN-------TKTPEQTRMKLEEFVPQEEWDVINHML 286
Query: 185 VGFGQTICTPL 195
VGFGQT+C P+
Sbjct: 287 VGFGQTVCKPV 297
>gi|395323833|gb|EJF56288.1| DNA glycosylase [Dichomitus squalens LYAD-421 SS1]
Length = 433
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 147/242 (60%), Gaps = 17/242 (7%)
Query: 1 MKTLEPVYSLGVD-----ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--N 53
+ + PV ++G D ETD PK +RF+ L+S +LSS TKD+V D A+ +L +
Sbjct: 153 QRIVAPVDTMGCDQAQLKETD----PKNQRFSTLVSLMLSSQTKDEVTDAAVAKLREAVG 208
Query: 54 GLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPG 113
G + +A+ +A E+ I + I V F+ RK +++ A+ ++ GD+P ++DEL +LPG
Sbjct: 209 GTLSIDAVLRASESAISEAICKVGFWRRKTQYIRQAAQKLKDEFGGDVPKTVDELCSLPG 268
Query: 114 IGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLP 173
+GPKMA + + + W GI VD HVHRI NRLGW P T +PE+TR LQ WLP
Sbjct: 269 VGPKMAFLALQVAWKVNAGIGVDVHVHRITNRLGWHKSP-----TKTPEETRLNLQSWLP 323
Query: 174 KEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE-YCPSAFKESSTSSSKSKKSESSSLRK 232
E IN LLVGFGQTIC P+ P+C C +S+ CPSA K SSSK++ + +S
Sbjct: 324 VELHPDINHLLVGFGQTICAPVGPKCDQCELSDGLCPSARKVVKASSSKTRSKKIASAVS 383
Query: 233 LE 234
+E
Sbjct: 384 VE 385
>gi|392894668|ref|NP_001254908.1| Protein NTH-1, isoform b [Caenorhabditis elegans]
gi|293324783|emb|CBK55599.1| Protein NTH-1, isoform b [Caenorhabditis elegans]
Length = 224
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 128/200 (64%), Gaps = 18/200 (9%)
Query: 33 LLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPVAFYTRKACNMKKI 89
+LSS T+D+V A++RL +GL +I K E + DL + PV FY RKA ++K
Sbjct: 1 MLSSQTRDEVNAAAMKRLKDHGL----SIGKILEFKVPDLETILCPVGFYKRKAVYLQKT 56
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
AKI + GDIP SLD L ALPG+GPKMAN+VM + W GI VDTHVHRI NRLGW+
Sbjct: 57 AKILKDDFSGDIPDSLDGLCALPGVGPKMANLVMQIAWGECVGIAVDTHVHRISNRLGWI 116
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
KTS+PE+T++AL+ LPK EW IN LLVGFGQ C P+RP+CG C CP
Sbjct: 117 -------KTSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQPVRPKCGTCLCRFTCP 169
Query: 210 SAFKESSTSSSKSKKSESSS 229
S S+ + KS+ E+S+
Sbjct: 170 S----STAKNVKSETEETST 185
>gi|320169582|gb|EFW46481.1| endonuclease III-like protein 1 [Capsaspora owczarzaki ATCC 30864]
Length = 412
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 144/226 (63%), Gaps = 7/226 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D++ P+ R+ VLLS +LS+ TKD++ GA++RL+ +G T + I
Sbjct: 173 PVDVMGCERLADTTSSPETYRYQVLLSLMLSAQTKDEITAGAMKRLIAHGC-TLDNILAT 231
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
I++LIYPV F+ RKA + + +++ + GDIPS+++ L++L G+GPKMA++ M
Sbjct: 232 PVDKIQELIYPVGFHRRKAEYILETSQMLKDSFHGDIPSTIEGLVSLKGVGPKMAHITMD 291
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W + G+ VDTHVHRI NRL WV+ ++T +PE TR+ALQ W+P+E W +N LL
Sbjct: 292 VAWQQMVGLGVDTHVHRIANRLKWVS-----KETKTPEDTRKALQEWMPREYWPGLNVLL 346
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSL 230
VGFGQTIC P+ PRC C C A + + + K + E +++
Sbjct: 347 VGFGQTICRPVNPRCWDCLNLHTCAFARRPETRARIKKHRQEQANM 392
>gi|405957860|gb|EKC24038.1| Endonuclease III-like protein 1 [Crassostrea gigas]
Length = 372
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Query: 7 VYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
V S+G D +D+ P+ R+ VLLS +LSS TKD++ A+++L ++G ++ +D
Sbjct: 9 VDSMGCDVISDTLASPEVYRYQVLLSLMLSSQTKDQITSAAMKKLREHGCSIDNILETSD 68
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
+ + +LIYPV F+ +K +K+ +KI +Y+GDIP ++++L LPG+GPKMA + M
Sbjct: 69 QV-LGELIYPVGFWKKKIEYIKRTSKILQEEYNGDIPDTVEKLCKLPGVGPKMAYLAMKC 127
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W + GI VDTHVHRI NRL WV +P T PE TR+ LQ WLP+E W IN LLV
Sbjct: 128 AWNQIVGIGVDTHVHRISNRLRWVKKP-----TKQPEDTRKELQDWLPREYWRDINHLLV 182
Query: 186 GFGQTICTPLRPRCGMCTVSEYCP 209
GFGQ C P+ PRC C E CP
Sbjct: 183 GFGQQTCLPVGPRCYECLNKEICP 206
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 79/122 (64%), Gaps = 5/122 (4%)
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ +KI +Y+GDIP ++++L LPG+GPKMA + M W + GI VDTHVHRI NRL
Sbjct: 232 RTSKILQEEYNGDIPDTVEKLCKLPGVGPKMAYLAMKCAWNQIVGIGVDTHVHRISNRLR 291
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
WV +P T PE TR+ LQ WLP+E W IN LLVGFGQ C P+ PRC C E
Sbjct: 292 WVKKP-----TKQPEDTRKELQDWLPREYWRDINHLLVGFGQQTCLPVGPRCYECLNKEI 346
Query: 208 CP 209
CP
Sbjct: 347 CP 348
>gi|19114122|ref|NP_593210.1| DNA endonuclease III [Schizosaccharomyces pombe 972h-]
gi|1351660|sp|Q09907.1|NTH1_SCHPO RecName: Full=Endonuclease III homolog; AltName: Full=DNA-(apurinic
or apyrimidinic site) lyase
gi|1065894|emb|CAA91893.1| DNA endonuclease III [Schizosaccharomyces pombe]
gi|62122683|dbj|BAD93307.1| DNA endonuclease III [Schizosaccharomyces pombe]
Length = 355
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 127/220 (57%), Gaps = 13/220 (5%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTA 58
K + PV G PK+ RF L++ +LSS TKD V ++ L L GL
Sbjct: 25 KVVAPVDVQGCHTLGERNDPKKFRFQTLVALMLSSQTKDIVLGPTMRNLKEKLAGGL-CL 83
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E I DE ++ LI V F+ RK +K++A+I K+ GDIP ++++L+ LPG+GPKM
Sbjct: 84 EDIQNIDEVSLNKLIEKVGFHNRKTIYLKQMARILSEKFQGDIPDTVEDLMTLPGVGPKM 143
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
+ M++ W GI VD HVHRICN L W T + EQTR ALQ WLPKE W
Sbjct: 144 GYLCMSIAWNKTVGIGVDVHVHRICNLLHWCN-------TKTEEQTRAALQSWLPKELWF 196
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESS 216
+N LVGFGQTIC P RC MCT+S CPSAFKE S
Sbjct: 197 ELNHTLVGFGQTICLPRGRRCDMCTLSSKGLCPSAFKEKS 236
>gi|389747875|gb|EIM89053.1| DNA glycosylase [Stereum hirsutum FP-91666 SS1]
Length = 477
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 130/220 (59%), Gaps = 12/220 (5%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
K PV ++G D PK +RFA L+S +LSS TKD+V D A+ +L Q G +
Sbjct: 175 KITAPVDTMGCDRAQYKETEPKNQRFATLISLMLSSQTKDEVTDAAVNKLRQVVGGTLSL 234
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
EA+ AD+A + + I V F+ RK +K+ A+ +D D+P ++DEL +LPG+GPKM
Sbjct: 235 EAVLAADDAIVSEAINKVGFWRRKTQYIKQSAQRLRDSFDSDVPKTVDELCSLPGVGPKM 294
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + + W GI VD HVHRI N LGW P T +PEQTR LQ WLPKE
Sbjct: 295 AFLCLQSAWKLNHGIGVDVHVHRITNWLGWHRPP-----TKTPEQTRLNLQSWLPKELHG 349
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE----YCPSAFKE 214
IN LLVGFGQ ICTP+ PRC CT+S CPSA E
Sbjct: 350 EINHLLVGFGQVICTPVAPRCTECTLSPSGLGLCPSARAE 389
>gi|403350158|gb|EJY74527.1| hypothetical protein OXYTRI_04215 [Oxytricha trifallax]
Length = 372
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 135/219 (61%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVD-ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G DS+ P E F L+ +LSS TKD+V A+ LLQNGL + + ID+
Sbjct: 40 PVDSMGSSCLADSNATPNEFAFQTLIGLMLSSQTKDEVTAEAVGILLQNGL-SIKMIDEI 98
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E + LI V F+ +KA +KK A+ + Y G +PS D+L+ALPG+GPKMA++++
Sbjct: 99 KEQDLNRLIEKVGFHNKKAIYLKKAARQIIEDYKGIVPSDYDKLIALPGVGPKMAHLLLQ 158
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ GI VDTHVHRI NRL WV ++T +P +T +ALQ WLP+++W +IN +L
Sbjct: 159 NCFDKTVGISVDTHVHRIANRLKWVP-----KQTKTPGETAKALQEWLPQDKWEKINWML 213
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VGFGQ IC P+ PRC C + CP K + SKSK
Sbjct: 214 VGFGQMICKPIGPRCYECKARDLCPFEPKSKPPTKSKSK 252
>gi|307196709|gb|EFN78168.1| Endonuclease III-like protein 1 [Harpegnathos saltator]
Length = 368
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 7/205 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +G + D + P R+ L++ +LSS TKD+V A+QRL G + I +
Sbjct: 159 PVDEMGCHKCADPNASPSVSRYQSLVALMLSSQTKDQVTHAAMQRLNIYGCK-PDIIAET 217
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + LIYPV F+ RK +KK + I L KY+GDIP ++ EL LPG+GPKMA++ M
Sbjct: 218 PDDVLGKLIYPVGFWKRKVEYIKKTSVILLNKYNGDIPRTIKELCDLPGVGPKMAHICMQ 277
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+ W V GI VDTHVHRI NRL WV +++T +PE+TR L+ WLPK W +N LL
Sbjct: 278 IAWGEVSGIGVDTHVHRISNRLEWV-----RKQTKTPEETRNELEDWLPKPLWSEVNHLL 332
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP 209
VGFGQ IC P P+C C + CP
Sbjct: 333 VGFGQEICLPRFPKCSECLNKDICP 357
>gi|332028140|gb|EGI68191.1| Endonuclease III-like protein 1 [Acromyrmex echinatior]
Length = 341
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 123/213 (57%), Gaps = 7/213 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + TD P R+ L++ +LSS TKD+V A+QRL G I
Sbjct: 133 PVDTMGCHKCTDPDASPVVSRYQSLVALMLSSQTKDQVTHAAMQRLNTYGCK-PNIIAAT 191
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + LIYPV F+ +K +KK + I L KY GDIP ++ EL LPG+GPKMA++ M
Sbjct: 192 PDDVLGKLIYPVGFWKKKVEYIKKTSVILLDKYGGDIPKTVKELCELPGVGPKMAHLCMR 251
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W V GI VDTHVHRI NRLGWV K+ T +PEQTR L+ WLPK W +N LL
Sbjct: 252 TAWGEVSGIGVDTHVHRIANRLGWV-----KKLTKTPEQTRNELEDWLPKPLWSEVNHLL 306
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESST 217
VGFGQ C P P+C C CP A K T
Sbjct: 307 VGFGQETCLPRFPKCSECLNKNICPFASKGGKT 339
>gi|169853989|ref|XP_001833672.1| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
okayama7#130]
gi|116505322|gb|EAU88217.1| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
okayama7#130]
Length = 450
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 143/246 (58%), Gaps = 26/246 (10%)
Query: 6 PVYSLG-----VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
PV ++G ETD PK +RFA L+S +LSS TKD+V D A+ +L G +
Sbjct: 172 PVDTMGCAQAQYKETD----PKNQRFATLVSLMLSSQTKDEVTDAAVTKLRTALGGAISV 227
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E I A + I + I V F+ RK +K+ A +++GD+P ++DEL +LPG+GPKM
Sbjct: 228 EGIINAPSSLISEAIAKVGFWRRKTDYLKQTAAKLQEEFEGDVPKTVDELCSLPGVGPKM 287
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + + + W GI VD HVHRI NRLGW +P T PE+TR LQ WLP E
Sbjct: 288 AFLCLQVAWNLNLGIGVDVHVHRISNRLGWHRKP-----TKDPEETRLNLQSWLPSELHQ 342
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVS------EYCPSAFK----ESSTSSSKSKKSESS 228
INPLLVGFGQ +CTP+ P+C CT+S CPSA K + +S+K K + +S
Sbjct: 343 EINPLLVGFGQVVCTPVNPKCDQCTLSGSSTSKALCPSARKNIAEQKRKTSTKRKLTATS 402
Query: 229 SLRKLE 234
L++ E
Sbjct: 403 ILKEEE 408
>gi|449543329|gb|EMD34305.1| hypothetical protein CERSUDRAFT_117182 [Ceriporiopsis subvermispora
B]
Length = 252
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 139/229 (60%), Gaps = 9/229 (3%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
+ + PV ++G ++ PK +RF+ L+S +LSS TKD+V D A+ +L + G +
Sbjct: 4 RIVAPVDTMGCEQAQLKEQDPKNQRFSTLISLMLSSQTKDQVTDAAMSKLREAVGGSLSV 63
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A+ ADE+ I D I V F+ RK +++ A+ +D D+P ++DEL +LPG+GPKM
Sbjct: 64 DALLAADESAIADAICKVGFWRRKTQYIRQAAQRLRDDFDSDVPKTVDELCSLPGVGPKM 123
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + + + W GI VD HVHRI NRLGW P T +PE+TR LQ WLP E
Sbjct: 124 AFLALQVAWKLNVGIGVDVHVHRITNRLGWHKPP-----TKTPEETRLNLQSWLPTELHP 178
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE-YCPSAFKESSTSSSKSKKSE 226
IN LLVGFGQTIC P+ PRC C +S+ CPSA K + K+ K+E
Sbjct: 179 EINHLLVGFGQTICLPVGPRCDECDLSQGLCPSARKVVRKVTKKTVKAE 227
>gi|399216845|emb|CCF73532.1| unnamed protein product [Babesia microti strain RI]
Length = 392
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 126/205 (61%), Gaps = 8/205 (3%)
Query: 6 PVYSLGVD-ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G D + + +RF L++ LLSS TKD + A+ L +GL T E I A
Sbjct: 188 PVDSMGAHCLGDKNADVETQRFQYLIACLLSSQTKDNITSEAINNLRNSGLLTIEKILTA 247
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
I I V F+ KA N+KKI +I K+D IP + ++L +LPGIGPKMA++++
Sbjct: 248 SVEEIDKHIGKVGFHNTKAKNLKKICEILRDKFDKKIPDNFNDLTSLPGIGPKMAHLILQ 307
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
LG+ V+GI VD HV+RI NRLGWV K++SPE TRE L++ +PK+ W ++N LL
Sbjct: 308 LGFGKVEGIAVDVHVNRIANRLGWV-------KSNSPEGTREQLEKIIPKKFWAQLNVLL 360
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP 209
VGFGQ ICT P C C + YCP
Sbjct: 361 VGFGQMICTKAGPGCSTCLANSYCP 385
>gi|392596315|gb|EIW85638.1| DNA glycosylase [Coniophora puteana RWD-64-598 SS2]
Length = 364
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/235 (42%), Positives = 142/235 (60%), Gaps = 11/235 (4%)
Query: 4 LEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEA 60
+ PV ++G ++ + P+ +RF+ L+S +LSS TKD+V D A+++L + G + EA
Sbjct: 132 IAPVDTMGCEQAQLTEQDPRNQRFSTLVSLMLSSQTKDEVTDAAVRKLREAVGGTLSMEA 191
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I DE + I V F+ RK +K+ A+ +D ++P ++DEL +LPG+GPKMA
Sbjct: 192 IIAVDEGVVAKAIEKVGFWRRKTQYIKQTAQRLKDDFDSEVPKTVDELCSLPGVGPKMAF 251
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+ + + W GI VD HVHRI NRLGW P T PEQTR LQ WLP E I
Sbjct: 252 LALQVAWKLNVGIGVDVHVHRITNRLGWHKPP-----TREPEQTRLNLQSWLPIELHPDI 306
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSKKSESSSLRKL 233
N +LVGFGQT+C P++PRC MC +S + CPSA K +S SK ++ S L +L
Sbjct: 307 NLMLVGFGQTVCLPVKPRCEMCKLSTMDLCPSA-KLPKSSPSKPRRVTSEELEQL 360
>gi|154332722|ref|XP_001562623.1| putative endonuclease III [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059626|emb|CAM41746.1| putative endonuclease III [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 259
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
Query: 4 LEPVYSLGVDETDSSLPPKE-RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
L PV ++G PKE +RF L++ +LS+ TKD V A+ L++ GL TA++I
Sbjct: 27 LAPVDTMGCHRLHDENAPKEVQRFQTLVALMLSAQTKDIVTATAMDALIKRGL-TAQSIH 85
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ I V F+ K ++K++A I + Y G +P +EL+ALPG+GPKMAN+
Sbjct: 86 AMTTTELDMHICKVGFHNTKVKHIKEVAAILIKDYGGKVPREYEELIALPGVGPKMANLF 145
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
GI VDTHVHRI R WV P T +PE TR+AL+ WLP++ W IN
Sbjct: 146 FQDADHRTVGIGVDTHVHRISQRYRWV--PST---VKTPEDTRKALESWLPQKHWGTINS 200
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
L+VG GQT+CTPL P+CG+C +S+ CP+AFKE ++K
Sbjct: 201 LMVGLGQTVCTPLYPKCGICELSDICPNAFKEVQQKGLRTK 241
>gi|313231808|emb|CBY08920.1| unnamed protein product [Oikopleura dioica]
Length = 303
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/218 (42%), Positives = 127/218 (58%), Gaps = 8/218 (3%)
Query: 6 PVYSLGVDETDSS-LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN-GLHTAEAIDK 63
PV ++G E S P E+RF +L+S L+SS TKD++ GA++RL ++ AE
Sbjct: 92 PVDTMGCTELYSGQATPVEKRFQILISLLMSSQTKDEINAGAMKRLNEHFKSFNAEKAAN 151
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
AD A + LI PV F+ K+ N+ K+ +IC +Y DIP ++++L+ LPGIGPKM + +
Sbjct: 152 ADTALLSSLITPVGFHKTKSKNIVKVGEICRDQYSSDIPDTIEDLVKLPGIGPKMGYLAL 211
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
+ W +GI VD HVHRIC RL + +P +PE TR L+ WLPKE+W IN L
Sbjct: 212 SCAWGKNEGIGVDVHVHRICQRLRFTKKP------KNPEATRNQLESWLPKEKWQEINKL 265
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSK 221
LVGFGQ IC+ P C C CP F S K
Sbjct: 266 LVGFGQQICSAKSPNCTNCLNDPICPKDFSGEKISPKK 303
>gi|319790163|ref|YP_004151796.1| DNA-(apurinic or apyrimidinic site) lyase [Thermovibrio
ammonificans HB-1]
gi|317114665|gb|ADU97155.1| DNA-(apurinic or apyrimidinic site) lyase [Thermovibrio
ammonificans HB-1]
Length = 219
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 117/183 (63%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD+V A +RL Q T E + K E I LIYPV FY RKA N
Sbjct: 37 FKILVATVLSLRTKDEVTAEAARRLFQVA-DTPEKLLKLSEEEIASLIYPVGFYNRKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+IA+I + Y G +PS L+ELL LPG+G K AN+V+T G F GICVDTHVHRI NR
Sbjct: 96 LKEIARILVEHYGGQVPSDLEELLKLPGVGRKTANLVVTQG-FKKPGICVDTHVHRIMNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V KT +PE+T AL+ LPKE W+ IN LLV GQ IC P+ P+C C +
Sbjct: 155 LGFV-------KTKTPEETEFALREKLPKEFWIEINDLLVALGQHICRPISPKCSQCPIE 207
Query: 206 EYC 208
C
Sbjct: 208 HLC 210
>gi|332373842|gb|AEE62062.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 132/210 (62%), Gaps = 15/210 (7%)
Query: 6 PVYSLGV----DETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
PV ++G DET+S P R+ LL+ +LSS TKD+V A+ RL ++G +
Sbjct: 22 PVDTMGCHKCSDETES---PPVIRYQALLALMLSSQTKDQVNHAAMLRLREHGCTVENIL 78
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+ +DE K LI PV F+ K +KK ++I +Y+ DIP++++++L LPG+GPKMA++
Sbjct: 79 NTSDEELGK-LIIPVGFWRNKVKYIKKTSEILKNQYNCDIPNTIEDMLKLPGVGPKMAHL 137
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
M + W V GI VDTHVHRI NR+GWV KT +PEQT +AL+ WLP + W +N
Sbjct: 138 CMKVAWGEVTGIGVDTHVHRIANRMGWV-------KTKTPEQTEKALESWLPFDLWNEVN 190
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVGFGQ IC P+ P+C C CP++
Sbjct: 191 HLLVGFGQQICRPINPQCSSCLNKTICPAS 220
>gi|71409393|ref|XP_807044.1| endonuclease III [Trypanosoma cruzi strain CL Brener]
gi|70870956|gb|EAN85193.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 134/219 (61%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +LG + D + + RR+ +LL+ +LS+ TKD V A+ L++ G T E I K
Sbjct: 29 PVDTLGCSKLFDKAALHETRRYHILLALMLSAQTKDHVTAAAMHALIRIGC-TPEVIAKM 87
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E T+ + I V F+ +KA ++K+ L ++ G +P S ++L+ALPGIGPKMA++ +
Sbjct: 88 PEKTLDEFISKVGFHNKKAKHIKEATDAILKRHQGRVPHSYEDLIALPGIGPKMAHLFLQ 147
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T +PE TR+AL+ WLP++ W IN LL
Sbjct: 148 EADGVVLGIGVDTHVHRISQRFLWV--PST---VKTPEDTRKALESWLPRKYWGEINGLL 202
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VG GQTICTP PRC C S+ CP+AFKE+ S + +
Sbjct: 203 VGLGQTICTPRLPRCSECPASDLCPNAFKEAKRSGKRGR 241
>gi|403417874|emb|CCM04574.1| predicted protein [Fibroporia radiculosa]
Length = 701
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 137/229 (59%), Gaps = 9/229 (3%)
Query: 2 KTLEPVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
+ + PV ++G + D P+ RRFA L+S +LSS TKD+ A+ +L + G +
Sbjct: 439 RKVAPVDTMGCNRAQDEETVPQNRRFATLISLMLSSQTKDETTFAAVTKLREVVGGALSV 498
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
EAI AD++ I + I V F+ RK +K+ A+ ++D D+P ++DEL +LPG+GPKM
Sbjct: 499 EAILNADDSVISEAICKVGFWRRKTQYIKQTAEQLRDRFDSDVPKTVDELCSLPGVGPKM 558
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + + W GI VD HVHRI NRLGW K +T +PE+TR LQ WLP E
Sbjct: 559 AFLALQDAWKLNAGIGVDVHVHRITNRLGW-----HKPQTKTPEETRLNLQSWLPLELHP 613
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE-YCPSAFKESSTSSSKSKKSE 226
IN LLVGFGQTIC P+ P+C C++ E CPSA S S S+ +E
Sbjct: 614 EINSLLVGFGQTICMPVGPKCNDCSLREGLCPSARTVKSKSRSRGVVAE 662
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 125/226 (55%), Gaps = 12/226 (5%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
+T+ PV ++G PK +RFA L+S +LSS TKD+V A+++L + G +
Sbjct: 138 RTVAPVDTMGCGRAQLGETIPKNQRFATLVSLMLSSQTKDEVTSAAVEKLREAVGGSLSV 197
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
EA+ +AD+ I D I V F+ RK +K+ + +D D+P ++DEL +LPG+GPKM
Sbjct: 198 EAVLRADDHIISDAICKVGFWRRKTQYIKRTTQRLHDDFDSDVPKTVDELCSLPGVGPKM 257
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + + + W GI VD HVHRI NRLGW P T +PE+TR LQ WLP E
Sbjct: 258 AFLALHVAWKVNAGIGVDVHVHRITNRLGWHAPP-----TKNPEETRLNLQSWLPTELRP 312
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
LLVGFGQ P+ R + S P S T+ +SK+
Sbjct: 313 TFTGLLVGFGQPDTMPVLKR----SASPLDPMHIVASHTTVRRSKR 354
>gi|170093764|ref|XP_001878103.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646557|gb|EDR10802.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 236
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 10/211 (4%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAID 62
PV ++G D+ PK RRFA L+S +LSS TKD+V D A+ +L + G T +A+
Sbjct: 30 PVDTMGCDQAQFKESDPKSRRFATLVSLMLSSQTKDEVTDAAVSKLREALGGSLTVDAMI 89
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+A+ + I + I V F+ RK +++ A+ ++D D+P ++DEL +LPG+GPKMA +
Sbjct: 90 EAEPSVISEAIAKVGFWRRKTDYLQRAAQRLRDEFDSDVPKTVDELCSLPGVGPKMAFLA 149
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ + W GI VD HVHRI NRLGW +P T +PE+TR LQ WLPKE IN
Sbjct: 150 LQVAWDLNHGIGVDVHVHRITNRLGWHKKP-----TKNPEETRLNLQSWLPKELHREINH 204
Query: 183 LLVGFGQTICTPLRPRCGMCTVS--EYCPSA 211
+LVGFGQ +C P+ P+C C +S + CPSA
Sbjct: 205 MLVGFGQVVCLPVGPKCDSCALSTKQLCPSA 235
>gi|71412348|ref|XP_808363.1| endonuclease III [Trypanosoma cruzi strain CL Brener]
gi|70872553|gb|EAN86512.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 133/219 (60%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +LG + D + + RR+ +LL+ +LS+ TKD V A+ L++ G T E I K
Sbjct: 29 PVDTLGCSKLFDKAALHETRRYHILLALMLSAQTKDHVTAAAMHALIRIGC-TPEVIAKM 87
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E T+ I V F+ +KA ++K+ L ++ G +P S ++L+ALPGIGPKMA++ +
Sbjct: 88 PEKTLDGFISKVGFHNKKAKHIKEATDAILKRHQGRVPHSYEDLIALPGIGPKMAHLFLQ 147
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T +PE TR+AL+ WLP++ W IN LL
Sbjct: 148 EADGVVLGIGVDTHVHRISQRFLWV--PST---VKTPEDTRKALESWLPRKYWGEINGLL 202
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VG GQTICTP PRC C S+ CP+AFKE+ S + +
Sbjct: 203 VGLGQTICTPRLPRCSECPASDLCPNAFKEAKRSGKRGR 241
>gi|407846292|gb|EKG02508.1| endonuclease III, putative [Trypanosoma cruzi]
Length = 251
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 133/219 (60%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +LG + D + + RR+ +LL+ +LS+ TKD V A+ L++ G T E I K
Sbjct: 29 PVDTLGCSKLFDKAALHETRRYHILLALMLSAQTKDHVTAAAMHALIRIGC-TPEVIAKM 87
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E T+ I V F+ +KA ++K+ L ++ G +P S ++L+ALPGIGPKMA++ +
Sbjct: 88 PEKTLDGFISKVGFHNKKAKHIKEATDAILKRHQGRVPHSYEDLIALPGIGPKMAHLFLQ 147
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T +PE TR+AL+ WLP++ W IN LL
Sbjct: 148 EADGVVLGIGVDTHVHRISQRFLWV--PST---VKTPEDTRKALESWLPRKYWGEINGLL 202
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VG GQTICTP PRC C S+ CP+AFKE+ S + +
Sbjct: 203 VGLGQTICTPRLPRCSECPASDLCPNAFKEAKRSGKRGR 241
>gi|393220744|gb|EJD06230.1| DNA glycosylase [Fomitiporia mediterranea MF3/22]
Length = 260
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 141/229 (61%), Gaps = 13/229 (5%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
K + PV ++G ++ S + PK RR + L+S +LSS TKD+V D A+++L + T
Sbjct: 25 KYIAPVDTMGCEQAQLSEIDPKGRRLSTLVSLMLSSQTKDEVTDAAVKKLRKALGESITV 84
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
EA+ +ADE+TI + I V F+ RK +K+ A + D+P ++DEL +LPG+GPKM
Sbjct: 85 EALIQADESTISEAINKVGFWRRKTQYIKQAAIRLRDDFGSDVPKTVDELCSLPGVGPKM 144
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + + W GI VD HVHRI NRL W K +T +PE+TR LQ WLPKE
Sbjct: 145 AFLCLQRAWDINDGIGVDVHVHRITNRLRW-----HKPQTKTPEETRLNLQSWLPKELHP 199
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSKSKKS 225
IN LLVGFGQTIC P+ PRC CT+S CPSA + +SKS+K+
Sbjct: 200 DINHLLVGFGQTICLPVGPRCDDCTLSTSGLCPSA---QNVKTSKSRKA 245
>gi|336380789|gb|EGO21942.1| hypothetical protein SERLADRAFT_475004 [Serpula lacrymans var.
lacrymans S7.9]
Length = 378
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 139/229 (60%), Gaps = 13/229 (5%)
Query: 4 LEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEA 60
+ PV ++G D+ PK +RF+ L+S +LSS TKD+V D A+ +L + G T +A
Sbjct: 129 VAPVDTMGCDQAQLKESDPKSQRFSTLVSLMLSSQTKDEVTDAAVAKLREAVGGSLTVDA 188
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I DE+T+ + I V F+ RK +K+ A ++D D+P ++DEL +LPG+GPKMA
Sbjct: 189 IISVDESTVSEAIAKVGFWRRKTQYIKQTALRLRDEFDSDVPKTVDELCSLPGVGPKMAF 248
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+ + + W GI VD HVHRI NRLGW +P T +PE+TR LQ WLP E I
Sbjct: 249 LALQVAWKLNVGIGVDVHVHRITNRLGWHQRP-----TKNPEETRLNLQSWLPTELHPEI 303
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSKSKKSES 227
N +LVGFGQ +C P+ P CG C +S CPSA T+++K +K+ +
Sbjct: 304 NHMLVGFGQMVCLPVGPLCGSCRLSSLGLCPSA---QGTATAKKRKTSA 349
>gi|383788949|ref|YP_005473518.1| putative DNA glycosylase/AP lyase [Caldisericum exile AZM16c01]
gi|381364586|dbj|BAL81415.1| putative DNA glycosylase/AP lyase [Caldisericum exile AZM16c01]
Length = 218
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/184 (48%), Positives = 117/184 (63%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +LS TKD+ + A RL + + T E + K E I+ LIYPV FY RKA
Sbjct: 36 FKILIGTILSLRTKDETTEEAANRLFE-VVKTPEDLIKLSEKDIEKLIYPVGFYKRKAKQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++AK + KYDG +P+ L+ELL L G+G K AN+V+T F+ GICVDTHVHRI NR
Sbjct: 95 IKEVAKTLIEKYDGRVPNDLEELLKLKGVGRKTANLVITEA-FDDYGICVDTHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +PEQT L++ LPK+ W INP+LV FGQ IC P+ P C C +
Sbjct: 154 LGWV-------KTKNPEQTEMELRKILPKKYWKTINPILVTFGQNICKPISPLCSKCPIE 206
Query: 206 EYCP 209
CP
Sbjct: 207 PLCP 210
>gi|237842133|ref|XP_002370364.1| endonuclease III-like protein 1, putative [Toxoplasma gondii ME49]
gi|211968028|gb|EEB03224.1| endonuclease III-like protein 1, putative [Toxoplasma gondii ME49]
gi|221502817|gb|EEE28531.1| A/G-specific adenine glycosylase muty, putative [Toxoplasma gondii
VEG]
Length = 523
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 134/227 (59%), Gaps = 21/227 (9%)
Query: 6 PVYSLGVD-------ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA 58
PV S+GV+ + D K +RF+VL++ +LSS TKD+ +QRL + +
Sbjct: 299 PVDSMGVEAMGELALQRDGE---KAKRFSVLVAVMLSSQTKDEQTAACMQRLRDADVLSP 355
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E + + A + +L+Y V FY KA +K+ +I L KY GDIP + +EL+ L G+GPKM
Sbjct: 356 EKMSRLSVAELSELLYGVGFYQNKARFLKEACQILLEKYGGDIPPTYEELVQLKGVGPKM 415
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN+ + GW V+GI VD HVHRI NRL WV +T +P +T+ ALQ++L + W
Sbjct: 416 ANIAVHAGWNRVEGIAVDVHVHRITNRLNWV-------RTKTPIETQHALQKFLRRPLWG 468
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKS 225
IN L VGFGQ IC P+ P C C S++CP K +S K KK+
Sbjct: 469 EINLLFVGFGQQICRPVNPLCSACKASQWCPVGRK----ASRKEKKT 511
>gi|452987710|gb|EME87465.1| hypothetical protein MYCFIDRAFT_26406 [Pseudocercospora fijiensis
CIRAD86]
Length = 413
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 130/212 (61%), Gaps = 14/212 (6%)
Query: 4 LEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA---E 59
L PV ++G + + + P++RR L++ +LSS TKD V A++ L Q+GL E
Sbjct: 140 LAPVDTMGCESLAEETRSPRDRRLQTLIALMLSSQTKDTVTAVAMKNL-QDGLEGGFNLE 198
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
A+ + D T+ +I V F+ K +K++A+I K++GDIP +++ L++LPG+GPKMA
Sbjct: 199 ALLEVDSPTLNSMINKVGFHNNKTKFIKQVAEILRDKFNGDIPDTIEGLVSLPGVGPKMA 258
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
+ M+ W +GI VD HVHRI N GW KTS+PEQTREAL+ WLPKE+W
Sbjct: 259 YLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTSTPEQTREALESWLPKEKWHD 311
Query: 180 INPLLVGFGQTICTPLRPRCGMCT--VSEYCP 209
IN LLVGFGQT C P+ C C V CP
Sbjct: 312 INHLLVGFGQTFCPPVGRDCSQCELGVKRLCP 343
>gi|452848386|gb|EME50318.1| hypothetical protein DOTSEDRAFT_68994 [Dothistroma septosporum
NZE10]
Length = 420
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 132/219 (60%), Gaps = 12/219 (5%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHTA 58
K L PV ++G + +++ P+++R L+S +LSS TKD V A++ + +N G T
Sbjct: 132 KVLAPVDTMGCESLAETTRSPRDQRLQTLVSLMLSSQTKDTVTAAAIRNMQENLPGGFTL 191
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+++ + +LI V F+ K +K +A I K+DGDIP +++ L++LPG+GPKM
Sbjct: 192 QSLIDVSPEDLNNLISKVGFHNNKTKFLKSVAVILREKFDGDIPDTIEGLISLPGVGPKM 251
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + M+ W +GI VD HVHRI N W KTS+PEQTR L+ WLPKE+W
Sbjct: 252 AYLCMSAAWGRDEGIGVDVHVHRITNLWKW-------HKTSTPEQTRAELESWLPKEKWH 304
Query: 179 RINPLLVGFGQTICTPLRPRCGMC--TVSEYCPSAFKES 215
IN LLVGFGQTIC P+ RC C +V + CPSA S
Sbjct: 305 DINHLLVGFGQTICLPVGRRCDECELSVQKLCPSAVAGS 343
>gi|221482289|gb|EEE20644.1| endonuclease III, putative [Toxoplasma gondii GT1]
Length = 523
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 134/227 (59%), Gaps = 21/227 (9%)
Query: 6 PVYSLGVD-------ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA 58
PV S+GV+ + D K +RF+VL++ +LSS TKD+ +QRL + +
Sbjct: 299 PVDSMGVEAMGELALQRDGE---KAKRFSVLVAVMLSSQTKDEQTAACMQRLRDADVLSP 355
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E + + A + +L+Y V FY KA +K+ +I L KY GDIP + +EL+ L G+GPKM
Sbjct: 356 EKMSRLSVAELSELLYGVGFYQNKARFLKEACQILLEKYGGDIPPTYEELVQLKGVGPKM 415
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN+ + GW V+GI VD HVHRI NRL WV +T +P +T+ ALQ++L + W
Sbjct: 416 ANIAVHAGWNRVEGIAVDVHVHRITNRLNWV-------RTKTPIETQHALQKFLRRPLWG 468
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKS 225
IN L VGFGQ IC P+ P C C S++CP K +S K KK+
Sbjct: 469 EINLLFVGFGQQICRPVNPLCSACKASQWCPVGRK----ASRKEKKT 511
>gi|336368058|gb|EGN96402.1| hypothetical protein SERLA73DRAFT_170779 [Serpula lacrymans var.
lacrymans S7.3]
Length = 302
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 97/229 (42%), Positives = 139/229 (60%), Gaps = 13/229 (5%)
Query: 4 LEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEA 60
+ PV ++G D+ PK +RF+ L+S +LSS TKD+V D A+ +L + G T +A
Sbjct: 53 VAPVDTMGCDQAQLKESDPKSQRFSTLVSLMLSSQTKDEVTDAAVAKLREAVGGSLTVDA 112
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I DE+T+ + I V F+ RK +K+ A ++D D+P ++DEL +LPG+GPKMA
Sbjct: 113 IISVDESTVSEAIAKVGFWRRKTQYIKQTALRLRDEFDSDVPKTVDELCSLPGVGPKMAF 172
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+ + + W GI VD HVHRI NRLGW +P T +PE+TR LQ WLP E I
Sbjct: 173 LALQVAWKLNVGIGVDVHVHRITNRLGWHQRP-----TKNPEETRLNLQSWLPTELHPEI 227
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSKSKKSES 227
N +LVGFGQ +C P+ P CG C +S CPSA T+++K +K+ +
Sbjct: 228 NHMLVGFGQMVCLPVGPLCGSCRLSSLGLCPSA---QGTATAKKRKTSA 273
>gi|388582291|gb|EIM22596.1| DNA glycosylase [Wallemia sebi CBS 633.66]
Length = 331
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/226 (44%), Positives = 135/226 (59%), Gaps = 12/226 (5%)
Query: 4 LEPVYSLGVDETDS-SLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAE 59
L PV +LG + + +L + +R+ +L+S +LSS TKD V A+ L L+ GL T E
Sbjct: 83 LAPVDTLGCERAPTENLDARTKRYQILVSLMLSSQTKDAVTSDAVNNLREQLEGGL-TLE 141
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
++ A + I+D I V F+ RK +KK A + ++GD+P +DEL +LPG+GPKM
Sbjct: 142 SVLAATDKQIQDAIAKVGFWRRKTEYLKKAAVMLRDNFEGDVPKDIDELCSLPGVGPKMG 201
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
+ + W GI VD HVHRI NRLGW QP TKQ PEQTR L+ WLPKE
Sbjct: 202 FLALQAAWNQNDGIGVDVHVHRITNRLGW-HQPPTKQ----PEQTRLNLESWLPKELHRD 256
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSK 223
+N LLVGFGQTIC P+ P+C C +S + CPSA K + + K
Sbjct: 257 VNKLLVGFGQTICLPVGPKCEDCKLSAEDLCPSARKFEGKKNKRRK 302
>gi|325294609|ref|YP_004281123.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065057|gb|ADY73064.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 218
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 117/183 (63%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD++ A +L Q + + + K E I LIYPV FY RKA N
Sbjct: 36 FKILIATVLSLRTKDEITAKAANKLFQVADNPYDML-KLKEEEIASLIYPVGFYRRKAKN 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I K+ + KY+G +P +DELL LPG+G K AN+V+TLG + GICVDTHVHRI NR
Sbjct: 95 IKEICKVLIEKYNGKVPDEIDELLKLPGVGRKTANLVVTLG-YGKPGICVDTHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V T +PE+T AL+ LPK+ W+ IN LLV GQ IC P P+C C +
Sbjct: 154 LGYVN-------TKTPEETEFALREKLPKDYWIEINDLLVSLGQHICHPTSPKCSQCPIE 206
Query: 206 EYC 208
+YC
Sbjct: 207 KYC 209
>gi|170584526|ref|XP_001897050.1| Endonuclease III-like protein 1 [Brugia malayi]
gi|158595585|gb|EDP34128.1| Endonuclease III-like protein 1, putative [Brugia malayi]
Length = 261
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 128/206 (62%), Gaps = 9/206 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV S+G D+ PK RF LLS +LSS TKD + A+ RL ++G T + +
Sbjct: 57 PVDSMGCHMLADALAEPKVFRFQTLLSLMLSSQTKDHITAAAMHRLREHGC-TVDDLVLI 115
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
++ L+ PV FY +KA +KK+A+I +YDGDIP++++ L +LPG+G KMA + M
Sbjct: 116 PTEKLQQLLIPVGFYKKKAVYIKKVAEILKERYDGDIPNTVEGLCSLPGVGEKMAYLTMC 175
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W ++G+ VDTHVHRI NRLGW+ KTS+P+++R AL+ +P+E+W +N LL
Sbjct: 176 TAWNQLEGLGVDTHVHRISNRLGWI-------KTSNPKESRMALEALVPREQWQELNKLL 228
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPS 210
VGFGQ C P+ P+C C C +
Sbjct: 229 VGFGQQTCLPVLPKCSECLNKNICAA 254
>gi|167515508|ref|XP_001742095.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778719|gb|EDQ92333.1| predicted protein [Monosiga brevicollis MX1]
Length = 224
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 128/209 (61%), Gaps = 9/209 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL--LQNGLHTAEAID 62
PV S+G + TD + PP RF VL+S +LSS TKD + A +RL L GL T +++
Sbjct: 22 PVDSMGCETLTDPNTPPAVARFHVLVSLMLSSQTKDAMTAAATRRLQALPGGL-TPKSMA 80
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ I +IY V F+ RK + K AKI L +++GD+P+++ EL+ LPG+G KMA +
Sbjct: 81 SMEPEAIAQVIYGVGFWRRKGEYIHKTAKILLAEHNGDVPATIAELVKLPGVGMKMAQIA 140
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M + V GI +D H HRI NRL W T QKT PE TR AL+RWLP+E W IN
Sbjct: 141 MAVAHNTVTGIGIDVHCHRIANRLAWCD---TAQKT--PEHTRVALERWLPRELWGEINL 195
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVGFGQ IC P P+C C + CP+A
Sbjct: 196 LLVGFGQQICLPRGPKCHSCLNRDICPAA 224
>gi|340059436|emb|CCC53820.1| putative endonuclease III [Trypanosoma vivax Y486]
Length = 259
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 133/230 (57%), Gaps = 7/230 (3%)
Query: 2 KTLEPVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
K PV ++G + D+ + RR+ +LL+ +LS+ TKD+V A+ L++ G T +
Sbjct: 24 KVEAPVDTVGCAKLFDTKASNEVRRYHILLALMLSAQTKDQVTADAMFSLIKYGC-TPAS 82
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I K E+ + D I V F+ KA N+K + L ++G +P S +EL+ALPG+GPKMA+
Sbjct: 83 ISKMTESKLNDFISKVGFHNTKAKNIKAATDMILKLHEGKVPQSYEELIALPGVGPKMAH 142
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+ + V GI VDTHVHRI R WV P T SPE TR+AL+ WLP+E W I
Sbjct: 143 LFLQAADGVVLGIGVDTHVHRIAQRFRWV--PAT---VKSPEDTRKALESWLPREHWGEI 197
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSL 230
N LLVG GQTIC P P+C C ++ CP+AF ES + E L
Sbjct: 198 NELLVGLGQTICAPRFPQCAECMANKLCPNAFVESRKCGKRQSSVEIEDL 247
>gi|390598493|gb|EIN07891.1| DNA glycosylase [Punctularia strigosozonata HHB-11173 SS5]
Length = 343
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 2 KTLEPVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
K PV ++G + D K +RF+ L+S +LSS TKD+V D A+++L G T
Sbjct: 80 KITAPVDTMGCERAQDEEKDAKSQRFSTLVSLMLSSQTKDEVTDAAVKKLRAALGGSITI 139
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A+ A E + D I V F+ RK +KK A++ +++GD+P ++DEL +LPG+GPKM
Sbjct: 140 DAVIGAAEDLVSDAINKVGFWRRKTTYIKKAAQMLKDEFNGDVPKTVDELCSLPGVGPKM 199
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQT-REALQRWLPKEEW 177
A + + + W GI VD HVHRI NRLGW P T +PE+T R LQ WLPKE
Sbjct: 200 AFLALQVAWKLNSGIGVDVHVHRITNRLGWHKPP-----TKNPEETSRLNLQSWLPKELH 254
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFK 213
IN +LVGFGQT+C P+ PRC +C + CPSA K
Sbjct: 255 PEINHMLVGFGQTVCLPIGPRCDLCELPGKNLCPSARK 292
>gi|328771332|gb|EGF81372.1| hypothetical protein BATDEDRAFT_10576 [Batrachochytrium
dendrobatidis JAM81]
Length = 266
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/199 (45%), Positives = 120/199 (60%), Gaps = 12/199 (6%)
Query: 13 DETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHTAEAIDKADEATIK 70
D+TD PK R+ L + LSS TKD V GA+ L + G T E+I D T+
Sbjct: 41 DKTD----PKIYRYQTLTALQLSSQTKDAVTAGAIANLKSHEPGGLTVESILAMDPKTLD 96
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
I V F+ RKA MK+ A+I T+Y+ DIP +L L++LPGIGPKMA++ M W
Sbjct: 97 GYISKVGFHNRKALYMKQTAEILKTQYNSDIPDTLSGLMSLPGIGPKMAHLAMQEAWNQT 156
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GI VDTHVHRI +R+GW + +PE +R+ L+ WLP++ W IN LLVGFGQT
Sbjct: 157 VGIGVDTHVHRISHRIGWT------KYLKTPEHSRKELEEWLPRQYWNEINKLLVGFGQT 210
Query: 191 ICTPLRPRCGMCTVSEYCP 209
+C P+ P+C C VS CP
Sbjct: 211 LCLPVGPKCTECPVSHLCP 229
>gi|355756457|gb|EHH60065.1| Endonuclease III-like protein 1 [Macaca fascicularis]
Length = 245
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 107/168 (63%), Gaps = 5/168 (2%)
Query: 44 DGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPS 103
D + L + + A K D+AT+ LIYPV F+ K +K+ + I +Y GDIP+
Sbjct: 80 DAPVDHLGVEHCYDSSAPPKTDDATLGKLIYPVGFWRSKVKYIKQTSTILQQRYGGDIPA 139
Query: 104 SLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQ 163
S+ EL+ALPG+GPKMA++ M + W V GI VDTHVHRI NRL W TK+ T SPE+
Sbjct: 140 SVAELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVHRIANRLRW-----TKKATKSPEE 194
Query: 164 TREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
TR AL+ WLP+E W IN LLVGFGQ C P+RPRC C CP+A
Sbjct: 195 TRAALEEWLPRELWHEINGLLVGFGQQTCLPVRPRCQACLNQALCPAA 242
>gi|407406883|gb|EKF30968.1| endonuclease III, putative [Trypanosoma cruzi marinkellei]
Length = 251
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 131/219 (59%), Gaps = 7/219 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D S + RR+ +LL+ +LS+ TKD V A+Q L++ G T E I K
Sbjct: 29 PVDTMGCSKLFDKSALHETRRYHILLALMLSAQTKDHVTAAAMQTLIRIGC-TPELIAKM 87
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E T+ I V F+ +K ++K+ L ++ G +P + ++L+ LPGIGPKMA++ +
Sbjct: 88 PEKTLDGYISKVGFHNKKTKHIKEATDAILKRHQGKVPHAYEDLIVLPGIGPKMAHLFLQ 147
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRIC R WV P T +PE TR+ L+ WLP++ W IN LL
Sbjct: 148 EADGVVLGIGVDTHVHRICQRFLWV--PST---VKTPEDTRKVLESWLPRKYWNEINGLL 202
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
VG GQTICTP P C C S+ CP+AFKE+ S + +
Sbjct: 203 VGLGQTICTPRFPHCSECPASDLCPNAFKETKRSGKRGR 241
>gi|398411994|ref|XP_003857329.1| hypothetical protein MYCGRDRAFT_34626 [Zymoseptoria tritici IPO323]
gi|339477214|gb|EGP92305.1| hypothetical protein MYCGRDRAFT_34626 [Zymoseptoria tritici IPO323]
Length = 407
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 135/231 (58%), Gaps = 14/231 (6%)
Query: 1 MKTLEP--VYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GL 55
M++L P V S+G + + + P +RR L++ +LSS TKD V A++ L N G
Sbjct: 131 MRSLNPAPVDSMGCENLAEETRSPLDRRLQTLIALMLSSQTKDPVTAAAMKNLQDNLKGG 190
Query: 56 HTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIG 115
E + + + +LI V F+ K +K A++ K++GDIP +++ L++LPG+G
Sbjct: 191 FNLEGLLNVEPDVLNNLIAKVGFHNNKTKYIKATAELLRDKWNGDIPETIEGLVSLPGVG 250
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKE 175
PKMA + M+ W +GI VD HVHRI N LGW KT++PEQTR AL+ WLPK+
Sbjct: 251 PKMAYLTMSSAWGRDEGIGVDVHVHRISNLLGW-------HKTNTPEQTRAALESWLPKD 303
Query: 176 EWVRINPLLVGFGQTICTPLRPRCGMCTVSEY--CPSAFKESSTSSSKSKK 224
W IN LLVGFGQ IC P+ RCG C ++ + CPSA S +KK
Sbjct: 304 RWHSINHLLVGFGQMICLPVGRRCGDCDLNTHNLCPSAVSSSPRKKHIAKK 354
>gi|296415754|ref|XP_002837551.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633423|emb|CAZ81742.1| unnamed protein product [Tuber melanosporum]
Length = 459
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 131/218 (60%), Gaps = 13/218 (5%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKD---KVADGALQRLLQNGLHT 57
K PV ++G + D + PK RRF L+S +LSS TKD VA L+ L GL
Sbjct: 174 KVKAPVDTMGCERLGDKAATPKLRRFHTLISLMLSSQTKDTINAVAMKGLREQLPGGL-C 232
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
E+I + + + +LI V F+ RK +KK A I K+ GDIP + + L ALPG+GPK
Sbjct: 233 LESILEVEPKRLDELIRIVGFHNRKTEYIKKAAVIIRDKHGGDIPDTFEGLTALPGVGPK 292
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
MA++ ++ W +GI VD HVHRICN WV KT++PE TREALQ WLP+++W
Sbjct: 293 MAHLCLSAAWDRTEGIGVDVHVHRICNLWDWV-------KTTTPEGTREALQAWLPRDKW 345
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSE-YCPSAFKE 214
IN LLVGFGQTIC P +CG C +S C +A+ E
Sbjct: 346 REINFLLVGFGQTICLPRGRKCGECALSSGLCGAAYME 383
>gi|298709647|emb|CBJ31456.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 289
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/209 (43%), Positives = 122/209 (58%), Gaps = 10/209 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA-----DEATIKDLIYPVAFY 79
RF VL+SA+LSS TKD V L R+ Q DE + +L++PV+F
Sbjct: 81 RFQVLMSAMLSSQTKDPVTAAGLNRMRQACAPAPLGAAALLATGMDEDALTELLHPVSFK 140
Query: 80 TRKACNM----KKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
KA ++ K++A+ + G IP +++ LL LPG+GPKM +VM + W +GICV
Sbjct: 141 KTKAKHILMVCKRLAEAEDGRQAGAIPDTVEGLLELPGVGPKMTYLVMDVAWGRNEGICV 200
Query: 136 DTHVHRICNRLGWV-TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTP 194
DTHVHRI NRLGWV T + K +PE+TR+ LQ WLP+E W +N LLVGFGQ +C
Sbjct: 201 DTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFA 260
Query: 195 LRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
RP C C +S CPSA + + SK
Sbjct: 261 TRPSCSACGISGLCPSADRHGDLALPPSK 289
>gi|255713108|ref|XP_002552836.1| KLTH0D02552p [Lachancea thermotolerans]
gi|238934216|emb|CAR22398.1| KLTH0D02552p [Lachancea thermotolerans CBS 6340]
Length = 383
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 125/213 (58%), Gaps = 16/213 (7%)
Query: 8 YSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---------NGLHTA 58
+ G+++ + P+ RF +L++ +LSS TKD+V A+ L++ G+ T
Sbjct: 122 HEFGIEQ--EQITPRTYRFQLLIALMLSSQTKDEVNAKAMFNLVEYCKEELGEPEGV-TL 178
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A+ K D+ TI LIYPV+FYTRKA +KK ++ +DGD+P + L++LPG+GPKM
Sbjct: 179 DAMFKIDQETIAQLIYPVSFYTRKALYIKKTIELLRDNFDGDMPPDIAGLVSLPGVGPKM 238
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
+ + W V GI VD HV R+C WV K SPE TR+ L+ WLP E W
Sbjct: 239 GYLALQKAWGKVDGIGVDVHVDRLCKMWKWVDP----SKAKSPEHTRKLLEEWLPYEYWY 294
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
INP+LVGFGQ IC P RC +C S+ C +A
Sbjct: 295 EINPVLVGFGQVICLPRGKRCDLCMASDVCNAA 327
>gi|430813977|emb|CCJ28721.1| unnamed protein product [Pneumocystis jirovecii]
Length = 300
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 130/220 (59%), Gaps = 22/220 (10%)
Query: 6 PVYSLGVD---ETDSSLPPKERRFAVLLSALLSSLTKD---KVADGALQRLLQNGLHTAE 59
PV ++G D + D+S R L+S +LSS TKD +A L++ L GL
Sbjct: 60 PVDTMGCDVAADKDTS------RLQTLISLMLSSQTKDTANAIAMRTLKQKLPGGLTLKS 113
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
ID DE + + I PV F+ RKA +K+ KI Y+GDIPS++ +L+ALPG+G KMA
Sbjct: 114 LID-VDEEVLNEFIRPVGFHNRKAKYIKETVKILERDYNGDIPSTIKDLVALPGLGFKMA 172
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
++ ++ W +GI VD HVHRI N LGWV T +PEQTR L+ WLP++ W
Sbjct: 173 HLCLSCAWNRTEGIGVDVHVHRISNLLGWVN-------TKTPEQTRLKLESWLPRKYWKE 225
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESST 217
IN L VGFGQTIC P + +C CT+S CPS+ K+ T
Sbjct: 226 INHLFVGFGQTICLPRKRKCSECTLSFLNLCPSSIKKDDT 265
>gi|403223295|dbj|BAM41426.1| endonuclease III [Theileria orientalis strain Shintoku]
Length = 426
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/190 (45%), Positives = 121/190 (63%), Gaps = 8/190 (4%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K+ F L++ +LSS TKD+V +++L + GL T E + K + + + LI V F+
Sbjct: 235 KDFEFQTLVACMLSSQTKDEVTASCMEKLKKRGL-TLENMLKMEVSELDSLISKVGFHAT 293
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
K+ N+KK+A+I KY G +PS+ +L +LPGIGPKMAN++ + + V GI VD HVHR
Sbjct: 294 KSKNIKKVAEILKEKYGGKVPSNKKDLESLPGIGPKMANLIQQIAFNIVDGIAVDLHVHR 353
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I NRLGWV KT +PE+TR L+ LPK W +NPLLVGFGQT CT P C
Sbjct: 354 ITNRLGWV-------KTKTPEETRVKLEELLPKSLWSEVNPLLVGFGQTFCTAAGPGCPT 406
Query: 202 CTVSEYCPSA 211
C V+++CP+
Sbjct: 407 CPVNKWCPTG 416
>gi|388855561|emb|CCF50784.1| related to NTG1-DNA repair protein [Ustilago hordei]
Length = 509
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 140/244 (57%), Gaps = 28/244 (11%)
Query: 2 KTLEPVYSLGVDET-----------DSSLP---PKERRFAVLLSALLSSLTKDKVADGA- 46
K + PV ++G D+ D+ P K R A L+S +LSS TKD V A
Sbjct: 208 KIVAPVDTMGCDQNGRSDRRADFWRDTDTPQDAAKRERLATLVSLMLSSQTKDPVTAEAV 267
Query: 47 --LQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSS 104
LQR L +GL +++ +AD+ TI I V F+ RK +K A+I + GD+P +
Sbjct: 268 YNLQRTLPDGL-CLKSLLEADDETISSCIAKVGFWRRKTGYLKSAARILKDDFQGDLPRT 326
Query: 105 LDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQT 164
+DEL +LPG+GPKMA + ++ + GI VDTHVHR+ NRLGW KT++PEQT
Sbjct: 327 VDELCSLPGVGPKMAFLALSSMGIQI-GIGVDTHVHRLTNRLGW-------HKTTTPEQT 378
Query: 165 REALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSKS 222
R LQ WLP+E +IN LLVGFGQ IC PL PRC +C V + +CPS S++K
Sbjct: 379 RLNLQSWLPQELHAKINSLLVGFGQVICVPLGPRCDLCDVGKAGFCPSRRVVDEKSTAKR 438
Query: 223 KKSE 226
K E
Sbjct: 439 VKVE 442
>gi|428671556|gb|EKX72474.1| endonuclease III family member protein [Babesia equi]
Length = 666
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/207 (42%), Positives = 125/207 (60%), Gaps = 8/207 (3%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV ++G S P F L++ +LSS TKD+V + L + GL T ++I +
Sbjct: 461 PVDTMGAHCLADSPDPATYEFQTLVACMLSSQTKDQVTAQTMDVLKKRGL-TLDSIMEIS 519
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E + LI V F+ KA N+KK A I K+ G +P +++EL++LPG+GPKMAN+V+ L
Sbjct: 520 EEELDTLISRVGFHNTKAKNIKKTATIIHEKFGGRVPDTMEELVSLPGVGPKMANLVIQL 579
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
+ + GI VD HVHRI NRLGWV KT +P++TR LQ +P++ W +N LLV
Sbjct: 580 AFKRIDGISVDLHVHRISNRLGWV-------KTKTPDETRLQLQELIPQKLWAEVNHLLV 632
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAF 212
GFGQTICT P C C +++CP+
Sbjct: 633 GFGQTICTAAGPGCATCGANKWCPTGI 659
>gi|71027073|ref|XP_763180.1| endonuclease III [Theileria parva strain Muguga]
gi|68350133|gb|EAN30897.1| endonuclease III, putative [Theileria parva]
Length = 418
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 120/192 (62%), Gaps = 8/192 (4%)
Query: 20 PPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFY 79
P + F L+ +LSS TKD++ ++ L + GL T + I K DE + +I V F+
Sbjct: 227 PGEHFEFQTLVGCMLSSQTKDEITALTMKNLKKRGL-TLDNILKMDEEELDSIISKVGFH 285
Query: 80 TRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHV 139
KA N+KK A+I +Y G +PS+ +L +LPGIGPKMAN+++ + + V G+ VD HV
Sbjct: 286 KTKAKNIKKAAQILKDQYGGKVPSNKKDLESLPGIGPKMANLILQVAFNMVDGVAVDIHV 345
Query: 140 HRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
HRI NRLGWV KT +PE+T LQ LPK+ W +INPLLVGFGQT CT P C
Sbjct: 346 HRITNRLGWV-------KTKTPEETSLKLQELLPKDLWSKINPLLVGFGQTFCTAAGPGC 398
Query: 200 GMCTVSEYCPSA 211
C V+++CP+
Sbjct: 399 PTCPVNKWCPTG 410
>gi|261335240|emb|CBH18234.1| endonuclease III, putative [Trypanosoma brucei gambiense DAL972]
Length = 259
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/222 (42%), Positives = 130/222 (58%), Gaps = 7/222 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D S + RR+ +LL+ +LS+ TKD V A+ L+ +G T E I K
Sbjct: 28 PVDTVGCSKLFDPSASDEVRRYHILLALMLSAQTKDHVTAAAMHSLIDHGC-TPETIYKM 86
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E+ + + I V F+ KA N+K + L + G +P S + L++LPG+GPKMA++ +
Sbjct: 87 PESKLNEFISKVGFHNTKARNIKAATESILQLHKGTVPRSYEGLVSLPGVGPKMAHLFLQ 146
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T SPE TR+AL+ WLP + W IN +L
Sbjct: 147 EADSVVIGIGVDTHVHRIAQRFHWV--PST---VKSPEDTRKALEAWLPAKYWGEINGML 201
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSE 226
VG GQTICTP PRC C S CPSAF+E+ + + SE
Sbjct: 202 VGLGQTICTPRIPRCSECPASGLCPSAFREAKGGVKRQRLSE 243
>gi|402225782|gb|EJU05843.1| DNA glycosylase [Dacryopinax sp. DJM-731 SS1]
Length = 321
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 131/220 (59%), Gaps = 10/220 (4%)
Query: 7 VYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLL--QNGLHTAEAIDK 63
V ++G D D +L PK RR +L+S +LSS TKD+ A+ L G+ T + +
Sbjct: 31 VDTMGCDRPQDRTLDPKSRRLTILVSLMLSSQTKDETTSAAVTALAGKMGGVITLQGMLD 90
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
A + ++++ I V F+ RK +++ + ++DGD+P ++DEL +LPG+GPKMA + +
Sbjct: 91 ASDESVQEAICKVGFWRRKTQYLRQTMEKLRDEFDGDVPKTVDELCSLPGVGPKMAFLCL 150
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
W GI VDTHVHRI NRLGW P T++PEQTR LQ WLP+E IN +
Sbjct: 151 QNAWDINVGIGVDTHVHRITNRLGWHKPP-----TTTPEQTRLNLQSWLPREYHAEINHM 205
Query: 184 LVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSK 221
LVGFGQ +C P+ PRC +C ++E CPS K + K
Sbjct: 206 LVGFGQALCFPVAPRCDLCALAEKKLCPSRSKVGNVEGRK 245
>gi|407927433|gb|EKG20326.1| hypothetical protein MPH_02340 [Macrophomina phaseolina MS6]
Length = 278
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 131/216 (60%), Gaps = 12/216 (5%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHTA 58
+ + PV ++G + D P ++R L++ +LSS TKD V A++ L N G
Sbjct: 4 RIVAPVDTMGCESLADRKDSPVDQRLQTLVALMLSSQTKDTVTAVAMKNLQDNLPGGFNL 63
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A+ + + A + LI V F+ K +K+ A++ ++DGDIP +++ L++LPG+GPKM
Sbjct: 64 QALIQVEPARLNSLIEKVGFHNNKTKYIKQTAELLRDRFDGDIPDTIEGLVSLPGVGPKM 123
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + M+ W +GI VD HVHRI N GW KT +PE+TR AL+ WLPK++W
Sbjct: 124 AYLCMSAAWGRDEGIGVDVHVHRITNLWGW-------HKTRTPEETRAALEAWLPKDKWH 176
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAF 212
IN LLVGFGQTIC P+ +CG CT++E CP A
Sbjct: 177 AINHLLVGFGQTICLPVGRKCGECTLAEKGLCPGAV 212
>gi|302679652|ref|XP_003029508.1| hypothetical protein SCHCODRAFT_78397 [Schizophyllum commune H4-8]
gi|300103198|gb|EFI94605.1| hypothetical protein SCHCODRAFT_78397, partial [Schizophyllum
commune H4-8]
Length = 225
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 125/212 (58%), Gaps = 13/212 (6%)
Query: 14 ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAIDKADEATIKD 71
ETD P+ RR L+S +LSS TKD+V D A+++L G T EA+ KAD+ TI+
Sbjct: 21 ETD----PRARRLVTLVSLMLSSQTKDEVTDAAIKKLRAALGGSITLEALLKADKETIEG 76
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
I V F+ +K + + AK +DGD+P + EL +L G+GPKMA + + W
Sbjct: 77 AINKVGFWPKKTGYIMEAAKTLRDDFDGDVPKTAKELQSLKGVGPKMAYLCLQAAWGIND 136
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
GI VD HVHRI NRL W P T++PE TR L+ WLPKE W IN +LVGFGQ I
Sbjct: 137 GIGVDVHVHRITNRLKWHNPP-----TNTPEATRANLESWLPKELWGDINHMLVGFGQEI 191
Query: 192 CTPLRPRCGMCTVSEY--CPSAFKESSTSSSK 221
C P+ PRC CT+ + CPSA + S + K
Sbjct: 192 CYPVNPRCDQCTLRDMGLCPSAQQNVSPTKRK 223
>gi|163785187|ref|ZP_02179872.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159879544|gb|EDP73363.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 218
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 113/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S ++S TKD+V A +RL T E I K E I +LIYP FY KA
Sbjct: 36 FKVLISTIISLRTKDEVTAKASKRLFSVA-KTPEEISKLSEEKIAELIYPAGFYKNKAKT 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K I+KI L KY+G +P +L++LL G+G K AN+V++ G FN ICVD HVHRI NR
Sbjct: 95 IKDISKIILEKYNGKVPDTLEKLLKFKGVGRKTANLVLSEG-FNKPAICVDIHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V KT +PE+T AL LP++ W +IN LLVGFGQTIC P+ P C C V
Sbjct: 154 LGFV-------KTKTPEKTEFALMEKLPEKYWNKINKLLVGFGQTICKPVSPYCSKCPVE 206
Query: 206 EYC 208
C
Sbjct: 207 NLC 209
>gi|453089077|gb|EMF17117.1| DNA glycosylase, partial [Mycosphaerella populorum SO2202]
Length = 267
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 131/220 (59%), Gaps = 14/220 (6%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGL---HT 57
K + PV ++G + ++ P +RR L++ +LSS TKD V A+++L Q GL
Sbjct: 17 KVIAPVDTMGCESLAEAHCSPVDRRLQTLVALMLSSQTKDTVTAVAMKQL-QEGLPGGFN 75
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
+A+ + LIYPV F+ RK +K++A I ++DGDIP S++ L++LPG+GPK
Sbjct: 76 LDALLHVQPEALNRLIYPVGFHNRKTIYIKQVAVILKEQFDGDIPQSIEGLMSLPGVGPK 135
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
MA + M+ W +GI VD HVHRI N W KTS+PE +R L+ WLP+E+W
Sbjct: 136 MAYLTMSAAWGRDEGIGVDVHVHRITNLWHW-------HKTSTPEHSRVELESWLPREKW 188
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKES 215
IN LLVG GQTIC P+ +C C + + CPSA + S
Sbjct: 189 HEINHLLVGLGQTICLPIGRKCDECDLGKQKLCPSAVERS 228
>gi|451998140|gb|EMD90605.1| hypothetical protein COCHEDRAFT_1179590 [Cochliobolus
heterostrophus C5]
Length = 420
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 127/213 (59%), Gaps = 14/213 (6%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADG---ALQRLLQNGLHTAEAI 61
PV ++G + D S P+++RF L++ +LSS TKD V +Q + G + E++
Sbjct: 152 PVDTMGCESLADRSQTPRDQRFQTLIALMLSSQTKDTVTAPVIWGMQERMPGGFNL-ESV 210
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
D + I V F+ K +K+ A+I K++ DIP +++ L++LPG+GPKMA++
Sbjct: 211 LALDPTELNGYINKVGFHNLKTKYIKQTAEILRDKWNSDIPDTIEGLVSLPGVGPKMAHL 270
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
M+ W +GI VD HVHRI N GW KT PEQTR AL+ WLPKE+W IN
Sbjct: 271 TMSAAWGRTEGIGVDVHVHRITNLWGW-------HKTQQPEQTRAALESWLPKEKWHDIN 323
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSE--YCPSAF 212
LLVGFGQTIC P+ +CG C +++ CPSA
Sbjct: 324 NLLVGFGQTICLPVGRKCGDCKLADRGLCPSAV 356
>gi|74025410|ref|XP_829271.1| endonuclease III [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834657|gb|EAN80159.1| endonuclease III, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 259
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 129/222 (58%), Gaps = 7/222 (3%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G + D S + RR+ +LL+ +LS+ TKD V A+ L+ +G T E I K
Sbjct: 28 PVDTVGCSKLFDPSASDEVRRYHILLALMLSAQTKDHVTAAAMHSLIDHGC-TPETIYKM 86
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E+ + + I V F+ KA N+K + L + G +P S + L++LPG+GPKMA++ +
Sbjct: 87 PESKLNEFISKVGFHNTKARNIKAATESILQLHKGTVPRSYEGLVSLPGVGPKMAHLFLQ 146
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
V GI VDTHVHRI R WV P T SPE TR+AL+ WLP + W IN +L
Sbjct: 147 EADSVVIGIGVDTHVHRIAQRFHWV--PST---VKSPEDTRKALEAWLPAKYWGEINGML 201
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSE 226
VG GQTICTP PRC C S CPSAF+E+ + + E
Sbjct: 202 VGLGQTICTPRIPRCSECPASGLCPSAFREAKGGVKRQRLPE 243
>gi|409082861|gb|EKM83219.1| hypothetical protein AGABI1DRAFT_33588 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 335
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 129/221 (58%), Gaps = 12/221 (5%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAIDKADEATIKDLIYPVAF 78
PK RF L+ +LSS TKD++ D A+ +L G + +AI A+E+T+ I V F
Sbjct: 92 PKNSRFTTLVYLMLSSQTKDEITDAAVTKLKAAVGGTLSIDAIVSAEESTVSAAINKVGF 151
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
+ RKA +K+ A+ L +D D+P ++ EL +LPG+GPKMA + + + W GI VD+H
Sbjct: 152 WRRKAGYIKQTAQRLLHDFDSDVPKTVKELCSLPGVGPKMAILALHVAWDINTGIGVDSH 211
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPR 198
VHRI N LGW +P T S E+TR +LQ WLP E IN LLVGFGQ IC P +PR
Sbjct: 212 VHRITNLLGWYNKP-----TKSAEETRLSLQSWLPAEFHREINGLLVGFGQVICLPTKPR 266
Query: 199 CGMCTVSE--YCPS---AFKESSTSSSKSKKSESSSLRKLE 234
C C +S CP+ AFK + + + ESS +E
Sbjct: 267 CDTCELSARGLCPNARMAFKATDSEGTVHLNPESSPKLNIE 307
>gi|343425282|emb|CBQ68818.1| related to NTG1-DNA repair protein [Sporisorium reilianum SRZ2]
Length = 525
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 125/210 (59%), Gaps = 14/210 (6%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGA---LQRLLQNGLHTAEAIDKADEATIKDLIYPVAF 78
K R A L+S +LSS TKD V A LQR L+ GL A + +DE TI I V F
Sbjct: 262 KRERLATLVSLMLSSQTKDPVTAEAVYNLQRTLRGGLCLASLLAASDE-TISHCIAKVGF 320
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
+ RK +K A+I + + GD+P ++DEL +LPG+GPKMA + ++ V GI VDTH
Sbjct: 321 WRRKTGYLKSAARILASDFGGDVPRTVDELCSLPGVGPKMAFLALSSMGIQV-GIGVDTH 379
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPR 198
VHR+ NRLGW T T +PEQTR LQ WLP E IN LLVGFGQ IC P+ PR
Sbjct: 380 VHRLTNRLGWHT-------TRTPEQTRLNLQSWLPAELHGEINRLLVGFGQVICVPVGPR 432
Query: 199 CGMCTVSE--YCPSAFKESSTSSSKSKKSE 226
C +C+V+ CPSA S++K K E
Sbjct: 433 CDLCSVAAAGLCPSARVVDEKSAAKRVKVE 462
>gi|451845583|gb|EMD58895.1| hypothetical protein COCSADRAFT_203977 [Cochliobolus sativus
ND90Pr]
Length = 419
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/213 (41%), Positives = 127/213 (59%), Gaps = 14/213 (6%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADG---ALQRLLQNGLHTAEAI 61
PV ++G + D S P+++RF L++ +LSS TKD V +Q + G + E++
Sbjct: 152 PVDTMGCESLADRSRTPRDQRFQTLIALMLSSQTKDTVTAPVIWGMQERMPGGFNL-ESV 210
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+ + I V F+ K +K+ A+I K++ DIP +++ L++LPG+GPKMA++
Sbjct: 211 LALEPTELNGFINKVGFHNLKTKYIKQTAEILRDKWNSDIPDTIEGLVSLPGVGPKMAHL 270
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
M+ W +GI VD HVHRI N GW KT PEQTR AL+ WLPKE+W IN
Sbjct: 271 TMSAAWGRTEGIGVDVHVHRITNLWGW-------HKTQQPEQTRAALESWLPKEKWHDIN 323
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSE--YCPSAF 212
LLVGFGQTIC P+ +CG C +++ CPSA
Sbjct: 324 NLLVGFGQTICLPVGRKCGDCKLADRGLCPSAV 356
>gi|396486084|ref|XP_003842328.1| similar to TPA: DNA repair protein Ntg1 [Leptosphaeria maculans
JN3]
gi|312218904|emb|CBX98849.1| similar to TPA: DNA repair protein Ntg1 [Leptosphaeria maculans
JN3]
Length = 423
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 132/217 (60%), Gaps = 14/217 (6%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGL---HT 57
+ + PV ++G + + + P++RRF L++ +LSS TKD V A+ R +Q G+
Sbjct: 150 ENIAPVDTMGCESLAEKNRSPRDRRFQTLIALMLSSQTKDTVTAVAM-RSMQEGIPGGFN 208
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
E++ + A + I V F+ K +K+ A+I K++ DIP +++ L++LPG+GPK
Sbjct: 209 LESVLALEPAALNAFICKVGFHNLKTKYIKQTAEILRDKWNSDIPDTVEGLISLPGVGPK 268
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
MA + ++ W +GI VD HVHRI N GW KT +PEQTR AL+ WLP+++W
Sbjct: 269 MAYLTLSAAWGRDEGIGVDVHVHRITNLWGW-------HKTQNPEQTRAALESWLPRDKW 321
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAF 212
IN LLVGFGQTIC P+ +CG C +++ CPSA
Sbjct: 322 HDINNLLVGFGQTICLPVGRKCGECKLADRGLCPSAV 358
>gi|156082960|ref|XP_001608964.1| base excision DNA repair protein, HhH-GPD family domain containing
protein [Babesia bovis T2Bo]
gi|154796214|gb|EDO05396.1| base excision DNA repair protein, HhH-GPD family domain containing
protein [Babesia bovis]
Length = 205
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP 75
D++ + ++ L++ +LSS TKD V A+ L Q GL T E I K E + LI
Sbjct: 8 DATQSERIYQYQTLIACMLSSQTKDAVTAAAMDALKQRGL-TPENISKMPEDELDSLISK 66
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
V F+ KA ++K+ ++ L K+ G +P ++++L+ LPG+GPKM N+V+ +G+ + GI V
Sbjct: 67 VGFHKTKAKHIKQATEMILNKFGGKVPDNIEDLVTLPGVGPKMGNLVLQIGFKRINGIAV 126
Query: 136 DTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPL 195
D HVHRI NRL WV KT +PE+TR LQ +PK W +N LLVGFGQT+C
Sbjct: 127 DLHVHRIANRLQWV-------KTKTPEETRIKLQELIPKRLWAEVNHLLVGFGQTVCVAA 179
Query: 196 RPRCGMCTVSEYCP 209
P CG C + +CP
Sbjct: 180 GPGCGTCGANTWCP 193
>gi|443898423|dbj|GAC75758.1| endonuclease III [Pseudozyma antarctica T-34]
Length = 537
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 114/194 (58%), Gaps = 14/194 (7%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGA---LQRLLQNGLHTAEAIDKADEATIKDLIYPVAF 78
K R A L+S +LSS TKD V A LQR L NGL +D AD+ I I V F
Sbjct: 272 KRERLATLVSLMLSSQTKDPVTAEAVYNLQRNLPNGLCLQSLLD-ADDDAISSCIAKVGF 330
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
+ RK +K A+I +DGD+P ++DEL +LPG+GPKMA + ++ V GI VDTH
Sbjct: 331 WRRKTGYLKSAARILAADFDGDVPRTVDELCSLPGVGPKMAFLALSSMGIQV-GIGVDTH 389
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPR 198
VHR+ NRLGW T +PEQTR LQ WLP+E IN LLVGFGQ IC P PR
Sbjct: 390 VHRMTNRLGW-------HDTKTPEQTRLNLQSWLPRELHPHINRLLVGFGQVICVPTGPR 442
Query: 199 CGMCTVSE--YCPS 210
C +C V CPS
Sbjct: 443 CDLCNVGSAGLCPS 456
>gi|326437547|gb|EGD83117.1| hypothetical protein PTSG_12076 [Salpingoeca sp. ATCC 50818]
Length = 504
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 125/209 (59%), Gaps = 9/209 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHTAEAID 62
PV ++G + D S +RF +L++ +LSS TKD++ A++ L Q G T +
Sbjct: 179 PVDTMGCEVLADPSADGPTQRFHILVALMLSSQTKDELTSKAVRTLQQQLPGGLTPHTVT 238
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
A+ +++ IY V F+ RKA +K + + L + GDIP ++ +L+ LPG+G KMA +
Sbjct: 239 AAETRVLEECIYGVGFWRRKAQYLKGASTMILASFGGDIPQTIPDLIKLPGVGMKMATIT 298
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M + V GI VDTHVHRI NRL WV + T +PE TR L+RW+P+ W +N
Sbjct: 299 MAVANKQVSGIGVDTHVHRIANRLRWV------RNTKTPEHTRVELERWMPRRLWGEVNL 352
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVGFGQTIC P +P+C C + CPS+
Sbjct: 353 LLVGFGQTICQPRQPKCHECLNKDLCPSS 381
>gi|169614824|ref|XP_001800828.1| hypothetical protein SNOG_10562 [Phaeosphaeria nodorum SN15]
gi|160702827|gb|EAT81956.2| hypothetical protein SNOG_10562 [Phaeosphaeria nodorum SN15]
Length = 1058
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 129/215 (60%), Gaps = 12/215 (5%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHTA 58
+ + PV ++G + D P+++RF L++ +LSS TKD V A++ + +N G
Sbjct: 136 ENIAPVDTMGCESLADRERTPRDQRFQTLVALMLSSQTKDTVTAVAMRNMQENMPGGFNL 195
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E++ + +I V F+ K +K A+I K+DG+IP S++ L++LPG+GPKM
Sbjct: 196 ESVLALPPPDLNAMINKVGFHNLKTKYIKATAEILRDKFDGEIPDSIEGLVSLPGVGPKM 255
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
A + M+ W +GI VD HVHRI N GW KT +PEQTR AL+ WLP+++W
Sbjct: 256 AYLTMSAAWGKDEGIGVDVHVHRITNLWGW-------NKTQTPEQTRAALESWLPRDKWH 308
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSA 211
IN LLVG GQTIC P+ +CG C +++ CPSA
Sbjct: 309 DINNLLVGHGQTICLPVGRKCGECKLADRGLCPSA 343
>gi|393241149|gb|EJD48672.1| DNA glycosylase [Auricularia delicata TFB-10046 SS5]
Length = 253
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 122/194 (62%), Gaps = 8/194 (4%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQN-GLHTAEAIDKADEATIKDLIYPVAFY 79
PK +R+ L++ +LSS TKD+V A+ L + G T + I AD++ I I V F+
Sbjct: 46 PKTKRYVTLVALMLSSQTKDEVTHAAVMNLREALGGLTVDNILAADDSVISGAIAKVGFW 105
Query: 80 TRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHV 139
RK +KK A+ ++D D+P ++DEL +LPG+GPKMA + + W GI VDTHV
Sbjct: 106 RRKTEYLKKAAQKLRDEFDSDVPKTVDELCSLPGVGPKMAFLCLQSAWKLNVGIGVDTHV 165
Query: 140 HRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
HRI NRLGW K T++PEQTR LQ WLPK+ +N +LVGFGQTIC P+ P+C
Sbjct: 166 HRITNRLGW-----HKPTTTTPEQTRLNLQSWLPKDLHYDVNHMLVGFGQTICLPVGPKC 220
Query: 200 GMCTVS--EYCPSA 211
+C +S + CPSA
Sbjct: 221 DVCELSAKKLCPSA 234
>gi|406897553|gb|EKD41478.1| hypothetical protein ACD_73C00702G0003 [uncultured bacterium]
Length = 219
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 124/204 (60%), Gaps = 13/204 (6%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PV +GV S+ P F VL+S +LS TKDK A RL +T + I K
Sbjct: 21 PVPVVGVIAQASTHKP----FEVLISTILSLRTKDKTTHAASLRLFARA-NTPKGILKIP 75
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
++ LIYPV+FY KA ++ KI I L KY G++P LD+LL LPG+G K AN+V+T+
Sbjct: 76 LQELEQLIYPVSFYKTKAKSIHKICDILLEKYKGEVPDHLDDLLELPGVGRKTANLVITV 135
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
G F+ GICVDTHVHRI NR G++ KT + ++T L+ LPK+ W+R N LLV
Sbjct: 136 G-FDDYGICVDTHVHRITNRWGFI-------KTKTADETESVLREKLPKKYWIRYNDLLV 187
Query: 186 GFGQTICTPLRPRCGMCTVSEYCP 209
FGQ +C P+ P C +C +++ CP
Sbjct: 188 AFGQNLCGPVSPYCSLCPLAKMCP 211
>gi|118579102|ref|YP_900352.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
gi|118501812|gb|ABK98294.1| HhH-GPD family protein [Pelobacter propionicus DSM 2379]
Length = 218
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 113/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S ++S TKD+V A R+ +AE + K E I LIYP FY KA
Sbjct: 36 FKVLVSCIISLRTKDEVTAAASARMFARA-DSAERMLKLAEDEIAALIYPAGFYRTKAGQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA +T++ G++P +++LL G+G K AN+V+TLG F GICVDTHVHRICNR
Sbjct: 95 IHGIAHRLVTEFGGNVPDEMEDLLRFRGVGRKTANLVLTLG-FGKPGICVDTHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V+ T SPEQT AL+ LP E W+ IN LLV FGQ C P+ PRC C ++
Sbjct: 154 LGYVS-------TRSPEQTEMALRAQLPGEYWIAINDLLVAFGQNHCHPISPRCTTCRIA 206
Query: 206 EYC 208
E+C
Sbjct: 207 EFC 209
>gi|134078608|emb|CAK32626.1| unnamed protein product [Aspergillus niger]
Length = 390
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/198 (45%), Positives = 118/198 (59%), Gaps = 12/198 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL-LQNGLHTA--EAIDKADEATIKDLIYPVA 77
P++RRF L++ +LSS TKD V A+QRL + G HT E I + +LI V
Sbjct: 177 PRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGDHTLNLENILAVTPERLNELIAKVG 236
Query: 78 FYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDT 137
F+ K +K A I +YD DIPS+ EL+ LPG+GPKMA + M+ W +GI VD
Sbjct: 237 FHNNKTKYIKAAAIILRDQYDSDIPSTAPELMKLPGVGPKMAFLCMSAAWGKHEGIGVDV 296
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HVHRI N GW KT +PE+TR AL+ WLPK++W IN LLVG GQT+C P+
Sbjct: 297 HVHRITNLWGW-------HKTKNPEETRMALESWLPKDKWHEINKLLVGLGQTVCLPVAR 349
Query: 198 RCGMCTVS--EYCPSAFK 213
RCG C ++ + C S K
Sbjct: 350 RCGECDLAGTKLCKSEIK 367
>gi|426200731|gb|EKV50655.1| hypothetical protein AGABI2DRAFT_217472 [Agaricus bisporus var.
bisporus H97]
Length = 249
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 128/221 (57%), Gaps = 12/221 (5%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL--LQNGLHTAEAIDKADEATIKDLIYPVAF 78
PK RF L+ +LSS TKD++ D A+ +L G + +AI A+E+T+ I V F
Sbjct: 24 PKNSRFTTLVYLMLSSQTKDEITDAAVTKLKAAVGGTLSIDAIVSAEESTVSAAINKVGF 83
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
+ RKA +K+ A+ L +D D+P ++ EL +LPG+GPKMA + + + W GI VD+H
Sbjct: 84 WRRKAGYIKQTAQRLLHDFDSDVPKTVKELCSLPGVGPKMAILALHVAWDINTGIGVDSH 143
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPR 198
VHRI N LGW +P T S E+TR +LQ WLP E IN LLVGFGQ IC P +P
Sbjct: 144 VHRITNLLGWHNKP-----TKSAEETRLSLQSWLPAEFHREINGLLVGFGQVICLPTKPH 198
Query: 199 CGMCTVSE--YCPS---AFKESSTSSSKSKKSESSSLRKLE 234
C C +S CP+ AFK + + + ESS +E
Sbjct: 199 CDTCKLSARGLCPNARMAFKATDSEGTVHLSPESSPKLNIE 239
>gi|342186290|emb|CCC95776.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 259
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 124/211 (58%), Gaps = 6/211 (2%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
RR+ +LL+ +LS+ TKD V A+ L+++G T E I E + + I V F+ KA
Sbjct: 47 RRYHILLALMLSAQTKDHVTAAAMFSLIEHGC-TPEMIFNMPEVKLNEHISKVGFHNTKA 105
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
++K + + +++G +P S ++L+ LPG+GPKMA++ + + GI VDTHVHRI
Sbjct: 106 KHIKAATRFIVERHNGMVPRSYEDLVGLPGVGPKMAHLFLQEADGVILGIGVDTHVHRIA 165
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
R WV P T PE TR+AL+ WLP+ W IN LLVG GQTICTP P+C C
Sbjct: 166 QRFRWV--PST---VKGPEDTRKALESWLPRVYWGEINGLLVGLGQTICTPRLPQCSECG 220
Query: 204 VSEYCPSAFKESSTSSSKSKKSESSSLRKLE 234
++ CPSAF+E+ + + K E L E
Sbjct: 221 ANKLCPSAFREARRGTKRQKSPELEDLAPAE 251
>gi|71020263|ref|XP_760362.1| hypothetical protein UM04215.1 [Ustilago maydis 521]
gi|46099986|gb|EAK85219.1| hypothetical protein UM04215.1 [Ustilago maydis 521]
Length = 516
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 114/194 (58%), Gaps = 14/194 (7%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGA---LQRLLQNGLHTAEAIDKADEATIKDLIYPVAF 78
K R A L+S +LSS TKD V A LQR L NGL +D AD I I V F
Sbjct: 280 KRERLATLVSLMLSSQTKDPVTAEAVYNLQRTLPNGLCLQSLLD-ADNEMISQCISKVGF 338
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
+ RK +K A+I + GD+P ++DEL++LPG+GPKMA + ++ V GI VDTH
Sbjct: 339 WRRKTGYLKSAARILADDFQGDVPRTVDELVSLPGVGPKMAFLALSSMGIQV-GIGVDTH 397
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPR 198
VHR+ NRLGW KT +PE+TR LQ WLP + IN LLVGFGQ IC P+ PR
Sbjct: 398 VHRLTNRLGW-------HKTKTPEETRLNLQSWLPTQLHANINRLLVGFGQVICVPVGPR 450
Query: 199 CGMCTVSE--YCPS 210
C +C V CPS
Sbjct: 451 CDLCDVGRAGLCPS 464
>gi|123505745|ref|XP_001329048.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
gi|121911998|gb|EAY16825.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
Length = 238
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 122/218 (55%), Gaps = 8/218 (3%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ-NGLHTAEAIDKA 64
PV +LG + PK RF L+S +LSS+TKD+ A+++L Q G A + KA
Sbjct: 25 PVDTLGCGTQSEKVDPKTERFQTLISLMLSSMTKDQQTSAAVRKLQQMEGGLNAPNLMKA 84
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D + + I V F +KA + + AKIC KY+ DIP +L EL + G+G KM + M
Sbjct: 85 DYDVVLECIKSVGFAKKKAGYIIEAAKICHEKYNDDIPKTLKELTSFNGVGVKMGTLAMA 144
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
W GI VD HVHRI N LGWV KT P+ T ALQ+ LPKE W +N L
Sbjct: 145 HCWGEQIGIGVDVHVHRISNLLGWV-------KTKKPDDTELALQKILPKEIWSEVNHTL 197
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKS 222
VGFGQTIC +P+C C + + CP+ + S++ +S
Sbjct: 198 VGFGQTICDAKKPKCDECPIKDTCPALQRGSASEDDES 235
>gi|254581382|ref|XP_002496676.1| ZYRO0D05566p [Zygosaccharomyces rouxii]
gi|238939568|emb|CAR27743.1| ZYRO0D05566p [Zygosaccharomyces rouxii]
Length = 360
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 122/206 (59%), Gaps = 14/206 (6%)
Query: 11 GVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH--------TAEAID 62
G+++ D + PK R +L + +LSS TKD+V A++ ++Q + T E +
Sbjct: 123 GIEQVD--IEPKNYRLQLLTALMLSSQTKDEVTAQAMENIMQYSMEEFKITQGITLETLL 180
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ DE + +LI V F+TRKA +K++A+I + +D DIP+ L +L+LPG+GPKM +
Sbjct: 181 RIDEKKLDELIKSVGFHTRKAKYVKQMAQILVNTFDSDIPTDLPGILSLPGVGPKMGILA 240
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ W + GI VD HV R+C GWV +K +PE TR+ L+ WLP+E W INP
Sbjct: 241 LQKAWGKMDGIGVDLHVDRLCKMWGWVDA----KKCKTPEHTRKQLESWLPRELWYEINP 296
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYC 208
LLVGFGQ IC RC +C ++ C
Sbjct: 297 LLVGFGQVICMSRGKRCDLCLANDVC 322
>gi|195953263|ref|YP_002121553.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobaculum sp.
Y04AAS1]
gi|195932875|gb|ACG57575.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobaculum sp.
Y04AAS1]
Length = 225
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 119/196 (60%), Gaps = 9/196 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ ALLS+ TKD+ +RL + + E + E +K+LIY V FY KA N
Sbjct: 36 FRVLVCALLSTRTKDETTARVCERLFVK-VKSIEDLYNIKEEELKELIYGVGFYNTKAKN 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+++KI + KY IP++L+ELL LPG+G K+AN+V+ G F + ICVD HVHRI NR
Sbjct: 95 LKELSKILVEKYSAKIPNTLEELLELPGVGLKVANLVLAEG-FGIPAICVDVHVHRITNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
V KT +PEQT EAL+ LPK+ W+ IN LV FGQ IC P++P C +C +
Sbjct: 154 WCLV-------KTKTPEQTEEALKNILPKKYWIDINRYLVSFGQRICKPIKPSCNICPIE 206
Query: 206 EYCPSAFKESSTSSSK 221
+C + + S +
Sbjct: 207 RFCGKCIDKKNRSKQQ 222
>gi|333995660|ref|YP_004528273.1| endonuclease III [Treponema azotonutricium ZAS-9]
gi|333736234|gb|AEF82183.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Treponema azotonutricium ZAS-9]
Length = 247
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 117/188 (62%), Gaps = 9/188 (4%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P ++ +AVL+S +LS TKD V + LL+ E I +E T K L YP FY
Sbjct: 60 PPDKAWAVLVSTILSLRTKDAVTLKTSKSLLEKAPGPKELIGLGEEKTAK-LAYPAGFYR 118
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++KIA I LT+Y G +P+ +D LL+LPG+G K AN+V+T F++ GICVD HVH
Sbjct: 119 TKAANLQKIAVILLTQYGGKVPADMDALLSLPGVGRKTANLVLTEA-FDMDGICVDIHVH 177
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI NR+GWV +T P++T L+ LPK W RIN LLV +GQ +C P+ P C
Sbjct: 178 RISNRMGWV-------ETEVPDKTEAELREILPKRYWKRINALLVLYGQNVCRPVSPFCS 230
Query: 201 MCTVSEYC 208
C ++++C
Sbjct: 231 RCPLAKHC 238
>gi|367024033|ref|XP_003661301.1| hypothetical protein MYCTH_2300528 [Myceliophthora thermophila ATCC
42464]
gi|347008569|gb|AEO56056.1| hypothetical protein MYCTH_2300528 [Myceliophthora thermophila ATCC
42464]
Length = 510
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 121/220 (55%), Gaps = 24/220 (10%)
Query: 1 MKTLEPVYSLGVDE------TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---- 50
M+ P + VD D P+ERRF L++ +LSS TKD V A+ RL
Sbjct: 202 MRISGPAANAAVDTMGCERLADPDASPRERRFHTLVALMLSSQTKDTVNAEAMARLRTEL 261
Query: 51 ------LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSS 104
+ GL T E + D A + LI V F+ K +K+ A+I ++ DIP +
Sbjct: 262 PPHEPGARPGL-TVENVLAVDPAVLNRLISKVGFHNNKTRYLKQTAEILRDRFGSDIPPT 320
Query: 105 LDELLALPGIGPKMANMVM--TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPE 162
+D L +LPG+GPKMA++ M T GW V+GI VD HVHRI N GW P T PE
Sbjct: 321 IDGLTSLPGVGPKMAHLCMSATHGWGRVEGIGVDVHVHRITNLWGWQRPP-----TRGPE 375
Query: 163 QTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
TR AL+ WLP++ W IN LLVGFGQT+C P+ RCG C
Sbjct: 376 DTRRALESWLPRDRWKEINWLLVGFGQTVCLPVGRRCGDC 415
>gi|300120326|emb|CBK19880.2| unnamed protein product [Blastocystis hominis]
Length = 198
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 9/179 (5%)
Query: 33 LLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKI 92
+LSS TKD+ + +L + GL T + I + + + +LI V F+T+K +KK I
Sbjct: 1 MLSSQTKDQTTHATMLKLREYGL-TPKHIQETSDEKLGELICKVGFWTKKVKYIKKTTDI 59
Query: 93 CLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQP 152
L KYDGDIP +++EL+ LPG+GPKM + + + W + GI VD HVHRI NRL WV
Sbjct: 60 LLEKYDGDIPDTIEELVKLPGVGPKMGYLALKVAWNKIDGIGVDVHVHRISNRLEWV--- 116
Query: 153 GTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
T++PEQTR AL+ WLPK+ W IN LLVGFGQ IC P+C C + CPS+
Sbjct: 117 ----HTNTPEQTRVALEAWLPKQYWFEINLLLVGFGQQICKG-SPKCSECKLRNMCPSS 170
>gi|367017866|ref|XP_003683431.1| hypothetical protein TDEL_0H03610 [Torulaspora delbrueckii]
gi|359751095|emb|CCE94220.1| hypothetical protein TDEL_0H03610 [Torulaspora delbrueckii]
Length = 406
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 132/227 (58%), Gaps = 13/227 (5%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEAT 68
++ PK R +L++ +LS+ TKD++ A+ L++ + LH T EA+ K DE
Sbjct: 140 DAISPKNYRLQLLVALMLSAQTKDELNAQAMLNLIRYCIDELHIPQGLTLEALLKIDEKV 199
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ +LI V F+ RKA +K+ AKI + ++ DIP+ L +L+LPG+GPKM + + W
Sbjct: 200 LVNLIRTVGFHNRKAHYVKQTAKILVEQFQSDIPTDLVGILSLPGVGPKMGLLALQRAWG 259
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
+ GI VD HVHR+CN GWV+ +K + + TR+ L+ WLPK W INPLLVGFG
Sbjct: 260 KMDGIGVDVHVHRLCNMWGWVS-----KKCKTADHTRKDLESWLPKPLWYEINPLLVGFG 314
Query: 189 QTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLRKLER 235
Q IC RC +C ++ C K+ +++ K+S+ ++ R
Sbjct: 315 QVICMSRGKRCDLCLANDICNDVDKKVMIKAAQEKRSDERMRKRPNR 361
>gi|406601198|emb|CCH47119.1| putative endonuclease [Wickerhamomyces ciferrii]
Length = 369
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 133/219 (60%), Gaps = 21/219 (9%)
Query: 2 KTLEPVYSLG------VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL----- 50
K + PV ++G +S + K RF +L+S +LSS TKD+V A+ ++
Sbjct: 112 KIITPVDTMGCANIPKTINQESPITQKIYRFQLLVSLMLSSQTKDEVNYQAMTKMRNYFI 171
Query: 51 ----LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
++G+ T E++ DE + +LIY V F+ RK+ +KK A+I ++ DIP++L+
Sbjct: 172 NEAGFKDGI-TIESMLWIDEIKLDELIYSVGFHKRKSGYLKKTAEILQNQFQSDIPNTLE 230
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
L++LPG+GPKMA + + GW GI VDTHVHR+ + GWV P T PE TR+
Sbjct: 231 GLISLPGVGPKMAFLTLQEGWNLNLGIGVDTHVHRLSKQWGWV--PKT---VKDPEITRK 285
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L++W+PKE W INPLLVGFGQ+IC P RC +C++S
Sbjct: 286 ELEKWMPKEYWKEINPLLVGFGQSICLPRGRRCDLCSLS 324
>gi|345311962|ref|XP_001517653.2| PREDICTED: endonuclease III-like protein 1-like [Ornithorhynchus
anatinus]
Length = 290
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 114/170 (67%), Gaps = 7/170 (4%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LGV++ D PP+ +R+ VLLS +LSS TKD+V GA++RL +GL + + + +
Sbjct: 127 PVDQLGVEQCFDRDAPPEVQRYQVLLSLMLSSQTKDQVTAGAMRRLQAHGL-SVDGVLRM 185
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ I +Y GDIP+++ LL LPG+GPKMA++ M
Sbjct: 186 DDATLGRLIYPVGFWKSKVRFIKQTTAILKDRYRGDIPATVAGLLQLPGVGPKMAHLAMA 245
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
+ W V GI VDTHVHRI NRL W T+ +T SPEQTR AL+ WLP+
Sbjct: 246 IAWGAVSGIAVDTHVHRIANRLQW-----TQTETKSPEQTRAALEDWLPR 290
>gi|345567609|gb|EGX50538.1| hypothetical protein AOL_s00075g174 [Arthrobotrys oligospora ATCC
24927]
Length = 513
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 118/189 (62%), Gaps = 10/189 (5%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAEAIDKADEATIKDLIYP 75
+PPK +RF L++ ++SS TKD+V A++RL L GL T E+I + A + +LI
Sbjct: 227 VPPKVKRFQHLIALMMSSQTKDQVTGEAMRRLQTELPGGL-TLESILEVSPARLNELIGQ 285
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
V F+ RK +KK A + K+DGDIP+ ++++++L G+GPKM+ ++ W GI V
Sbjct: 286 VGFHNRKTEYIKKAAVVLRDKFDGDIPTEVEDMMSLDGVGPKMSYLLEQCAWDKSTGIGV 345
Query: 136 DTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPL 195
D HVHRI N WV Q +S PE TR LQ WLPKE W IN LLVGFGQ++C P
Sbjct: 346 DVHVHRIANMFKWVPQ------SSEPEVTRVYLQSWLPKELWREINWLLVGFGQSVCLPR 399
Query: 196 RPRCGMCTV 204
RC +CT+
Sbjct: 400 GRRCDLCTL 408
>gi|392412414|ref|YP_006449021.1| putative endoIII-related endonuclease [Desulfomonile tiedjei DSM
6799]
gi|390625550|gb|AFM26757.1| putative endoIII-related endonuclease [Desulfomonile tiedjei DSM
6799]
Length = 222
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/189 (48%), Positives = 118/189 (62%), Gaps = 11/189 (5%)
Query: 22 KERR--FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFY 79
++RR F VL+S +LS TKD V A +RLL T EA+ E I+ LI+PV FY
Sbjct: 34 RKRRDPFDVLVSTVLSLRTKDDVTRVASRRLLAVA-STPEALADLPEEEIEKLIFPVGFY 92
Query: 80 TRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHV 139
KA N++++A+ L KY G +P LDELL + G+G K AN+V+TLG F QGICVDTHV
Sbjct: 93 RTKARNLRQLARDLLQKYGGKVPDDLDELLTIKGVGRKTANLVITLG-FGQQGICVDTHV 151
Query: 140 HRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
HR+ NRLG+V+ T +PEQT AL+ LP E W+ N LLV +GQ IC P+ P C
Sbjct: 152 HRVSNRLGYVS-------TKTPEQTEMALRAKLPAEYWIEYNDLLVTWGQNICRPISPFC 204
Query: 200 GMCTVSEYC 208
C V C
Sbjct: 205 SKCPVLVCC 213
>gi|168022853|ref|XP_001763953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684692|gb|EDQ71092.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 226
Score = 163 bits (412), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 129/206 (62%), Gaps = 11/206 (5%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRL--LQNGLHTAE-AIDKADEATIKDLIYPVAFYT 80
++F L++A++SS T+D V A+QRL + GL+ A A D + + +++ PV FY
Sbjct: 27 QQFQALVAAMISSQTRDAVTGAAMQRLRAMPGGLNVAHIASDDVEIDALAEILKPVGFYR 86
Query: 81 RKACNMKKIAK-ICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW-FNVQGICVDTH 138
+KA MK IA+ + ++G +P+SL+EL+ LPG+GPK+A +V+ + + +G+ VDT+
Sbjct: 87 QKAKFMKSIAQSLAAPPHNGAVPNSLEELMKLPGVGPKVALLVLWVAFGMGEEGLIVDTN 146
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPR 198
V R+C+RLGWV T PE TR L+ W+P+ W + L VGFGQ +C PL P+
Sbjct: 147 VRRVCSRLGWVPADAT------PELTRRTLESWMPRSMWADTSFLFVGFGQQVCKPLAPK 200
Query: 199 CGMCTVSEYCPSAFKESSTSSSKSKK 224
C C VS+ CPSAFK+S ++ K
Sbjct: 201 CEGCKVSQLCPSAFKQSPKRQTRKPK 226
>gi|402077696|gb|EJT73045.1| DNA repair protein Ntg1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 585
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 131/225 (58%), Gaps = 15/225 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL------LQNGLHTAEAIDKA---DEATIKD 71
PK+RRF L++ +LSS TKD V A+ RL ++G +D + A +
Sbjct: 232 PKDRRFHTLIALMLSSQTKDTVNAVAMARLKSELPPCRDGAPAGLNLDNVLAVEPAVLNS 291
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWFN 129
LIY V F+ K +K+ A+I ++ GDIP +++ L++LPG+GPKMA++ M+ GW
Sbjct: 292 LIYGVGFHNNKTKYIKQAAEILRDRWAGDIPDTIEGLMSLPGVGPKMAHLCMSAPNGWDR 351
Query: 130 VQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
V+G+ VD HVHRI N GW G+ T +PE TR AL+ WLP++ W IN LLVGFGQ
Sbjct: 352 VEGVGVDVHVHRITNLWGWNASSGSP--TKNPEATRAALESWLPRDRWREINWLLVGFGQ 409
Query: 190 TICTPLRPRCGMCTV--SEYCPSAFKESSTSSSKSKKSESSSLRK 232
T+C P+ +CG C V + C +A ++ + ++ LRK
Sbjct: 410 TVCLPVGRKCGGCEVGLAGLCRAADRKKVAEGRRMREEGGVLLRK 454
>gi|327398938|ref|YP_004339807.1| DNA-(apurinic or apyrimidinic site) lyase [Hippea maritima DSM
10411]
gi|327181567|gb|AEA33748.1| DNA-(apurinic or apyrimidinic site) lyase [Hippea maritima DSM
10411]
Length = 217
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 120/208 (57%), Gaps = 9/208 (4%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K L Y V+ + + + + VL+S +LS TKD+ A RL + +
Sbjct: 10 VKLLREAYRGFVEPVVTQVAKDKDPYKVLISTILSLRTKDETTLRASIRLFDIADNIYK- 68
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+++ +E I+ LIYPV FY KA N+KKIA+I + Y G IP LDELL LP +G K AN
Sbjct: 69 LNELNEDEIERLIYPVGFYKTKAKNLKKIARIIIENYGGKIPDDLDELLKLPNVGRKTAN 128
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ G F ICVD HVHRI NRLG V T +PE+T AL + LPK+ W+
Sbjct: 129 LVLAKG-FGKPAICVDIHVHRISNRLGLVD-------TKTPEETEFALSKILPKKYWIEF 180
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N LLV FGQ IC P+ P C C +S+YC
Sbjct: 181 NDLLVPFGQNICRPISPFCSKCIISKYC 208
>gi|386812677|ref|ZP_10099902.1| endonuclease III [planctomycete KSU-1]
gi|386404947|dbj|GAB62783.1| endonuclease III [planctomycete KSU-1]
Length = 215
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/188 (47%), Positives = 117/188 (62%), Gaps = 10/188 (5%)
Query: 22 KERR-FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
KER F VL+S +LS TKDK A RL ++T + + + ++ LIYPV FY
Sbjct: 28 KERTPFHVLISCILSLRTKDKTTHEASHRLFA-VVNTPKDMAEIPTEKLEKLIYPVGFYR 86
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N+K+I K + Y G +P +DELL L G+G K AN+V+TLG + GICVDTHVH
Sbjct: 87 VKAKNIKEICKELVKTYRGKVPDEIDELLKLSGVGRKTANLVVTLG-YKKPGICVDTHVH 145
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI NR G+V KT +P++T AL+ LPKE W+ IN LLV FGQ IC P+ P+C
Sbjct: 146 RITNRWGYV-------KTKNPKETEFALREKLPKEYWLIINDLLVTFGQNICVPISPKCS 198
Query: 201 MCTVSEYC 208
C V+ YC
Sbjct: 199 FCPVNMYC 206
>gi|400756511|ref|NP_952501.2| endonuclease III-like DNA glycosidase [Geobacter sulfurreducens
PCA]
gi|409911973|ref|YP_006890438.1| endonuclease III-like DNA glycosidase [Geobacter sulfurreducens
KN400]
gi|298505566|gb|ADI84289.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter sulfurreducens KN400]
gi|399107822|gb|AAR34824.2| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter sulfurreducens PCA]
Length = 218
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 114/183 (62%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D+ A +RL T A+ + + I+ IYPV FY KA
Sbjct: 36 FKVLVSCILSLRTQDRTTGPASERLFALA-DTPAAMVRLSKDDIEKAIYPVGFYHTKAEQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I ++ L +YDG +P LDELLA G+G K AN+V+TLG F GICVDTHVHRICNR
Sbjct: 95 ILEICRVLLERYDGGVPDELDELLAFKGVGRKTANLVITLG-FGKPGICVDTHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G++ +T +PEQT +L+R LP W+ IN LV FGQ CTP+ PRC C ++
Sbjct: 154 WGYI-------RTKTPEQTEFSLRRILPHRYWLVINDYLVTFGQNHCTPVSPRCSTCVLA 206
Query: 206 EYC 208
++C
Sbjct: 207 QWC 209
>gi|209879798|ref|XP_002141339.1| HhH-GDP family base excision DNA repair protein [Cryptosporidium
muris RN66]
gi|209556945|gb|EEA06990.1| HhH-GDP family base excision DNA repair protein, putative
[Cryptosporidium muris RN66]
Length = 199
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 8/202 (3%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
+ F +L+S LLSS TKD+ + RL ++GL T + I + ++ ++Y V F+
Sbjct: 4 RHLHFHILVSTLLSSQTKDESTAACMNRLKKHGL-TPQIICEMSIDSLTKILYGVGFHNN 62
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
KA +K+++KI + Y G +P ++L++LPGIGPKMAN+V+ + V GI VDTH+HR
Sbjct: 63 KAKYLKEVSKIIIESYSGKVPDKYEQLISLPGIGPKMANLVLQTAFNKVNGISVDTHMHR 122
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I NR+GWV KT SP +T+ +++ LP W +N + VGFGQ IC P+ P+C
Sbjct: 123 IFNRIGWV-------KTKSPNETKYHMEKRLPHSYWRLVNKVFVGFGQIICRPVNPKCSE 175
Query: 202 CTVSEYCPSAFKESSTSSSKSK 223
C + C + T + + K
Sbjct: 176 CVIRALCSHGRRRHKTGTIEMK 197
>gi|449328842|gb|AGE95118.1| endonuclease III [Encephalitozoon cuniculi]
Length = 238
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 124/221 (56%), Gaps = 22/221 (9%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ----------- 52
+ PV ++G T S +ERRF +L+S LLSS TKD+V A+ RL +
Sbjct: 27 VSPVDTMGCSITPSCRTEEERRFHILVSLLLSSQTKDEVTYEAMARLRKLLPESAATDGE 86
Query: 53 -NGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL 111
G T E + +D I + I V F+ RKA N+KKIA+I K +P + +L++L
Sbjct: 87 ARGGLTIERVANSDVKHINECIKKVGFHNRKAANLKKIAEILREK---GLPREMKDLISL 143
Query: 112 PGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRW 171
PGIG KMA + M+ GI VDTHVHRI NR+G V KT E TR L+R
Sbjct: 144 PGIGNKMALLYMSHACNRTVGISVDTHVHRISNRIGLV-------KTRDVESTRRELERV 196
Query: 172 LPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAF 212
+P+EEW IN +LVGFGQTIC RP+C C + CPS+
Sbjct: 197 VPREEWKTINNILVGFGQTICVAKRPKCEECCIRGRCPSSL 237
>gi|310796892|gb|EFQ32353.1| HhH-GPD superfamily base excision DNA repair protein [Glomerella
graminicola M1.001]
Length = 469
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 18/214 (8%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQN---------GLHTAEAIDKADEATIKDL 72
++RR+ +L + +LSS TKD V A++RL+ G E + D A + +L
Sbjct: 185 RDRRYHLLTALMLSSQTKDTVNAVAMKRLMTELPPHEPGAAGGLNLENVLAVDPAFLNEL 244
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I+ V F+ K +K A+I ++DGDIP +++ L +LPG+GPKMA + ++ W +G
Sbjct: 245 IWAVGFHNNKTKYIKAAAEILRDRFDGDIPDTIEGLTSLPGVGPKMAYLCLSAAWDRTEG 304
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VD HVHRI N GW KT+ PE TR ALQ WLPK++W IN LLVGFGQT+C
Sbjct: 305 IGVDVHVHRITNLWGW-------HKTTQPEATRLALQSWLPKDKWREINWLLVGFGQTLC 357
Query: 193 TPLRPRCGMCT--VSEYCPSAFKESSTSSSKSKK 224
P+ +CG C +S C +A ++ ++++
Sbjct: 358 LPVGRKCGECDLGLSGMCKAAERKKVNEGRRTRE 391
>gi|242221333|ref|XP_002476417.1| predicted protein [Postia placenta Mad-698-R]
gi|220724324|gb|EED78375.1| predicted protein [Postia placenta Mad-698-R]
Length = 258
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 92/218 (42%), Positives = 131/218 (60%), Gaps = 14/218 (6%)
Query: 2 KTLEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTA 58
+ + PV ++G D P+ +RFA L+S +LSS TKD+V A+ +L G +
Sbjct: 35 RIIAPVDTMGCDRPQLEETTPQNQRFATLVSLMLSSQTKDEVTFAAVCKLRAAIGGALSV 94
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A+ AD++ I + I V F+ RK +K+ +I +++ D+P +++EL +LPG+GPKM
Sbjct: 95 DALLAADDSAIGEAICKVGFWRRKTQYIKRATQILRDEFNSDVPKTVEELCSLPGVGPKM 154
Query: 119 ANMVMTLGW----FNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
A + + W NV GI VD HVHRI NRLGW K T +PE+TR L+ WLP
Sbjct: 155 AFLALQDAWKLQVVNV-GIGVDVHVHRITNRLGW-----HKPLTKTPEETRVNLESWLPL 208
Query: 175 EEWVRINPLLVGFGQTICTPLRPRCGMCTVSE-YCPSA 211
E +IN LLVGFGQT+C P+ PRC C +S CPSA
Sbjct: 209 ELHPKINALLVGFGQTVCLPVGPRCDTCELSNGLCPSA 246
>gi|163846363|ref|YP_001634407.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222524128|ref|YP_002568599.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus sp.
Y-400-fl]
gi|163667652|gb|ABY34018.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aurantiacus
J-10-fl]
gi|222448007|gb|ACM52273.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus sp.
Y-400-fl]
Length = 220
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 111/184 (60%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD + RL T A+ I +LIYPV FY KA
Sbjct: 38 FRILIATILSLRTKDTLTAVVAPRLFAVA-DTPAAMVALGAERIAELIYPVGFYRVKAQQ 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ I +I L +Y+G++P+ LDELL LPG+G K AN+V+T G F + GICVD HVHRICNR
Sbjct: 97 IVHICQILLERYNGEVPADLDELLKLPGVGRKTANLVVTAG-FGLPGICVDIHVHRICNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T +PE+T AL+ LP+ W+ IN LLV GQ IC P PRC +C +
Sbjct: 156 WGYV-------QTRTPEETEMALRARLPQRYWIPINRLLVTLGQNICHPTSPRCSICPIR 208
Query: 206 EYCP 209
E CP
Sbjct: 209 EVCP 212
>gi|367004330|ref|XP_003686898.1| hypothetical protein TPHA_0H02610 [Tetrapisispora phaffii CBS 4417]
gi|357525200|emb|CCE64464.1| hypothetical protein TPHA_0H02610 [Tetrapisispora phaffii CBS 4417]
Length = 455
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 112/186 (60%), Gaps = 12/186 (6%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLHTAEAID-----KADEAT 68
S + PK R LL +LS+ TKD+V A+ +++ + L + E ++ + D T
Sbjct: 162 SQIIPKNYRLQTLLGVMLSAQTKDEVTAQAIHNIMEYCIDELKSEEGLNLDSLLEIDNKT 221
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ D+IY V F+ RK +K+ AK+ KY+ DIPS++ +LLALPG+GPKM +VM W
Sbjct: 222 LDDMIYSVGFHNRKTKFIKETAKLLKEKYNSDIPSNIKDLLALPGVGPKMGYLVMQKAWG 281
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
+ GICVD HVHR WV +K ++PE TR+AL++WLP E W IN +LVGFG
Sbjct: 282 KIDGICVDVHVHRFAKLFKWVDP----KKCTTPEHTRKALEKWLPHELWYEINSVLVGFG 337
Query: 189 QTICTP 194
Q I P
Sbjct: 338 QVISEP 343
>gi|315045922|ref|XP_003172336.1| DNA base excision repair N-glycosylase 1 [Arthroderma gypseum CBS
118893]
gi|311342722|gb|EFR01925.1| DNA base excision repair N-glycosylase 1 [Arthroderma gypseum CBS
118893]
Length = 417
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/223 (39%), Positives = 125/223 (56%), Gaps = 30/223 (13%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLH---TA 58
PV ++G E S PP++RRF L++ +LSS TKD V A+ RL L + H A
Sbjct: 115 PVDTMGCAELYWQSSPPRDRRFHTLIALMLSSQTKDTVTAAAMMRLHTQLTDETHDKPVA 174
Query: 59 EAIDKADEAT----------------IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIP 102
E D+A + + +LI V F+ K +K A+I ++D DIP
Sbjct: 175 EVWDRAHQMAPSTLNLENMLAVSPERLNELIGAVGFHNNKTRYIKATAEILRDRFDSDIP 234
Query: 103 SSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPE 162
S+++ L++LPG+GPKMA + M+ W +G+ VD HVHRI N GW KT +PE
Sbjct: 235 STVEGLISLPGVGPKMAYLCMSSAWNRHEGVGVDVHVHRITNLWGW-------HKTKNPE 287
Query: 163 QTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
TR AL+ WLP+++W IN LLVG GQT+C P+ RC C +S
Sbjct: 288 ATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLS 330
>gi|19173415|ref|NP_597218.1| ENDONUCLEASE III [Encephalitozoon cuniculi GB-M1]
gi|74621135|sp|Q8SRB8.1|NTH1_ENCCU RecName: Full=Endonuclease III homolog; AltName: Full=DNA-(apurinic
or apyrimidinic site) lyase
gi|19171004|emb|CAD26394.1| ENDONUCLEASE III [Encephalitozoon cuniculi GB-M1]
Length = 238
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 124/221 (56%), Gaps = 22/221 (9%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ----------- 52
+ PV ++G T S +ERRF +L+S LLSS TKD+V A+ RL +
Sbjct: 27 VSPVDTMGCSITPSCRTEEERRFHILVSLLLSSQTKDEVTYEAMARLRKLLPESAATDGE 86
Query: 53 -NGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL 111
G T E + +D I + I V F+ RKA N+KKIA+I K +P + +L++L
Sbjct: 87 ARGGLTIERVANSDVKHINECIKKVGFHNRKAANLKKIAEILREK---GLPREMKDLISL 143
Query: 112 PGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRW 171
PGIG KMA + M+ GI VDTHVHRI NR+G V +T E TR L+R
Sbjct: 144 PGIGNKMALLYMSHACNRTVGISVDTHVHRISNRIGLV-------RTRDVESTRRELERV 196
Query: 172 LPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAF 212
+P++EW IN +LVGFGQTIC RPRC C + CPS+
Sbjct: 197 VPRKEWKTINNILVGFGQTICVAKRPRCEECCIRGRCPSSL 237
>gi|404476670|ref|YP_006708101.1| endonuclease III [Brachyspira pilosicoli B2904]
gi|431808877|ref|YP_007235775.1| endonuclease III [Brachyspira pilosicoli P43/6/78]
gi|434382739|ref|YP_006704522.1| endonuclease III [Brachyspira pilosicoli WesB]
gi|404431388|emb|CCG57434.1| endonuclease III [Brachyspira pilosicoli WesB]
gi|404438159|gb|AFR71353.1| endonuclease III [Brachyspira pilosicoli B2904]
gi|430782236|gb|AGA67520.1| endonuclease III [Brachyspira pilosicoli P43/6/78]
Length = 217
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS TKD A RL + + E I K E I LIYPV FY KA N
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNAKEMI-KLTEEEIAKLIYPVGFYNVKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ + + Y+G++P +DELL L G+G K+AN+V+T F+ GICVDTHVHRI NR
Sbjct: 96 ILEVSHMIIDDYNGEVPDEIDELLKLKGVGRKVANLVVTEA-FDKDGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PE+T AL+ LPKE W N LV +GQ +C P+ P C CTVS
Sbjct: 155 FGYV-------HTKTPEETEFALREKLPKEYWRVYNDTLVVYGQNLCKPISPLCSECTVS 207
Query: 206 EYC 208
+YC
Sbjct: 208 QYC 210
>gi|255727965|ref|XP_002548908.1| hypothetical protein CTRG_03205 [Candida tropicalis MYA-3404]
gi|240133224|gb|EER32780.1| hypothetical protein CTRG_03205 [Candida tropicalis MYA-3404]
Length = 331
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 126/216 (58%), Gaps = 17/216 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA------EAIDKADEATIKDLIY 74
P+ RF +L+S +LSS TKD+V A++ L + L + E++ K A I I
Sbjct: 105 PRIYRFQLLISLMLSSQTKDEVNYEAMKSLHEGLLKSHPEGLCIESLSKLSAAEIDSYIN 164
Query: 75 PVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGIC 134
V F+ RK+ +KK I L+++ GD+P ++ E++ LPG+GPKM + + GW GI
Sbjct: 165 KVGFHNRKSQYIKKTCDILLSQHGGDVPKTISEIVKLPGLGPKMGYLFLQNGWGINDGIG 224
Query: 135 VDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTP 194
VD H+HR+ GWV+ K ++PE+ R L++WLPKE W +INPLLVGFGQ +C P
Sbjct: 225 VDVHLHRLAQMWGWVS-----PKANTPEKARIELEKWLPKEYWGQINPLLVGFGQVVCVP 279
Query: 195 LRPRCGMCTVSE--YCPSA----FKESSTSSSKSKK 224
P C +CT+ C SA K+S+ S + +K
Sbjct: 280 RSPNCDVCTLGRKGICKSANKKLLKDSTVSDERKQK 315
>gi|296109836|ref|YP_003616785.1| DNA-(apurinic or apyrimidinic site) lyase [methanocaldococcus
infernus ME]
gi|295434650|gb|ADG13821.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
infernus ME]
Length = 343
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 125/191 (65%), Gaps = 14/191 (7%)
Query: 22 KERR-FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
KER F VL+S ++S+ TKD+V + ++L + + + + K DE ++ L+YP FY
Sbjct: 22 KERDPFKVLVSTIISARTKDEVTEEVSKKLFEK-VKDVDDLLKIDEKELESLLYPAGFYK 80
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA +KK+AK+ KY+G++PS++DELL+LPG+G K A++V++L FN ICVDTHVH
Sbjct: 81 NKARTLKKLAKVLKEKYNGEVPSNMDELLSLPGVGVKTASLVLSLA-FNKDEICVDTHVH 139
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI NR W T +PE++RE L++ LPK+ W IN LLV FG++IC P +P+C
Sbjct: 140 RISNR--WFID------TETPEESREELKKVLPKKYWKSINNLLVLFGRSICGP-KPKCD 190
Query: 201 MC--TVSEYCP 209
C + E CP
Sbjct: 191 KCYEEIKELCP 201
>gi|219848317|ref|YP_002462750.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aggregans
DSM 9485]
gi|219542576|gb|ACL24314.1| DNA-(apurinic or apyrimidinic site) lyase [Chloroflexus aggregans
DSM 9485]
Length = 220
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 111/184 (60%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD + RL T A+ I +LIYPV FY KA
Sbjct: 38 FRILIATILSLRTKDTLTAVVAPRLFAVA-DTPAAMLALGVDRIAELIYPVGFYRVKARQ 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ I +I L KY+G++PS LDELL LPG+G K AN+V+T G F + GICVD HVHRICNR
Sbjct: 97 IAAICQILLEKYNGEVPSDLDELLKLPGVGRKTANLVITAG-FGLPGICVDVHVHRICNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T +PE+T AL+ LP+ W+ IN LLV GQ IC P PRC +C +
Sbjct: 156 WGYV-------QTRTPEETEMALRAKLPQRYWIPINRLLVTLGQNICHPTSPRCSICPIR 208
Query: 206 EYCP 209
+ CP
Sbjct: 209 DLCP 212
>gi|300870285|ref|YP_003785156.1| endonuclease III [Brachyspira pilosicoli 95/1000]
gi|300687984|gb|ADK30655.1| endonuclease III, putative [Brachyspira pilosicoli 95/1000]
Length = 217
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS TKD A RL + E I K E I LIYPV FY KA N
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGSAKEMI-KLTEEEIAKLIYPVGFYNVKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ + + Y+G++P +DELL L G+G K+AN+V+T F+ GICVDTHVHRI NR
Sbjct: 96 ILEVSHMIIDDYNGEVPDEIDELLKLKGVGRKVANLVVTEA-FDKDGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PE+T AL+ LPKE W N LV +GQ +C P+ P C CTVS
Sbjct: 155 FGYV-------HTKTPEETEFALREKLPKEYWRVYNDTLVVYGQNLCKPISPLCSECTVS 207
Query: 206 EYC 208
+YC
Sbjct: 208 QYC 210
>gi|380488747|emb|CCF37167.1| HhH-GPD superfamily base excision DNA repair protein
[Colletotrichum higginsianum]
Length = 439
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 113/196 (57%), Gaps = 16/196 (8%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN---------GLHTAEAIDKADE 66
D ++RRF +L++ +LSS TKD V A+ RL+ G E + +
Sbjct: 200 DPDASERDRRFHILIALMLSSQTKDTVNAVAMGRLMAELPPHEPGAAGGLNLENVLAVEP 259
Query: 67 ATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLG 126
A + +LI+ V F+ K +K A+I K+DGDIP +++ L +LPG+GPKMA + ++
Sbjct: 260 AVLNELIWAVGFHNNKTKYIKASAEILRDKFDGDIPDTIEGLTSLPGVGPKMAYLCLSAA 319
Query: 127 WFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVG 186
W +GI VD HVHRI N GW KT+ PE TR ALQ WLP+ W IN LLVG
Sbjct: 320 WDRTEGIGVDVHVHRITNLWGW-------HKTTQPEATRLALQGWLPRNRWREINWLLVG 372
Query: 187 FGQTICTPLRPRCGMC 202
FGQT+C P+ +CG C
Sbjct: 373 FGQTVCLPVGRKCGDC 388
>gi|15605819|ref|NP_213196.1| endonuclease III [Aquifex aeolicus VF5]
gi|2982981|gb|AAC06594.1| endonuclease III [Aquifex aeolicus VF5]
Length = 213
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 114/183 (62%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ ALLS+ TKD++ +R + + + E + K E I++LIYPV FY KA
Sbjct: 36 FRVLVCALLSTRTKDELTWRVCKRFFEK-VKSPEDLIKLSEKEIEELIYPVGFYRVKAKQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I KI + KY G +P +L+ELL LPG+G K+AN+V++ G FN I VD HVHRI NR
Sbjct: 95 LKEIGKILIEKYGGKVPDTLEELLKLPGVGRKVANLVLSKG-FNKPAIVVDVHVHRIVNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
V KT +PE+T L +PKE W IN LLV FGQTIC P +P+C C V
Sbjct: 154 WCLV-------KTKTPEETERKLMEIVPKELWSDINYLLVAFGQTICLPRKPKCEECPVE 206
Query: 206 EYC 208
+YC
Sbjct: 207 KYC 209
>gi|156065713|ref|XP_001598778.1| hypothetical protein SS1G_00867 [Sclerotinia sclerotiorum 1980]
gi|154691726|gb|EDN91464.1| hypothetical protein SS1G_00867 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 437
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 126/227 (55%), Gaps = 24/227 (10%)
Query: 10 LGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAE 59
LG D D PK +R+ L + +LSS TKD A+ RL GL T +
Sbjct: 151 LGQDTVD----PKTKRYHTLTALMLSSQTKDTTNAVAMNRLYTELPAYKEGAPIGL-TLD 205
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
I D + +LI+ V F+ K +K A+I +++GDIP +++ L++LPG+GPKMA
Sbjct: 206 NILAVDPKLLNELIWVVGFHNNKTKYIKAAAEILKDQWNGDIPDTIEGLMSLPGVGPKMA 265
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
+ M+ W +GI VD HVHRI N GW T G PE+TR ALQ WLPKE W
Sbjct: 266 YLCMSSAWGRTEGIGVDVHVHRITNMWGWHTTKG-------PEETRLALQAWLPKELWHE 318
Query: 180 INPLLVGFGQTICTPLRPRCGMCT--VSEYCPSAFKESSTSSSKSKK 224
IN LLVGFGQTIC P+ +CG C ++ C +A + T K+K+
Sbjct: 319 INWLLVGFGQTICLPVGKKCGSCELGMNGLCKAADRSKVTIGRKTKE 365
>gi|164663005|ref|XP_001732624.1| hypothetical protein MGL_0399 [Malassezia globosa CBS 7966]
gi|159106527|gb|EDP45410.1| hypothetical protein MGL_0399 [Malassezia globosa CBS 7966]
Length = 663
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 116/191 (60%), Gaps = 14/191 (7%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
RF L+S +LSS TKD V A+ +L L +GL T ++ A I D I V+FY R
Sbjct: 426 RFTTLVSLMLSSQTKDPVTADAVYKLQTRLPDGL-TLVSLRDAPPEQITDCIAKVSFYRR 484
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
K +K + +I K+ GD+P ++DEL +PG+GPKMA + M NV GI VDTHVHR
Sbjct: 485 KTDYLKTMTRILEEKHHGDVPQTVDELCEIPGVGPKMAFLQMQSMGLNV-GIGVDTHVHR 543
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I NRLGW KT +PEQTR ALQ WLP++ IN +VGFGQ IC P+ PRC +
Sbjct: 544 ISNRLGWC-------KTKTPEQTRLALQSWLPRDLHGVINKQMVGFGQVICLPVSPRCDL 596
Query: 202 CTVSE--YCPS 210
C + + CPS
Sbjct: 597 CYIGQAKLCPS 607
>gi|154411860|ref|XP_001578964.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
gi|121913166|gb|EAY17978.1| HhH-GPD superfamily base excision DNA repair protein [Trichomonas
vaginalis G3]
Length = 239
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 118/216 (54%), Gaps = 8/216 (3%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ-NGLHTAEAID 62
L PV ++G D T + PK+ RF +L+S +LSS TKD++ A +L + G A +
Sbjct: 23 LAPVDTMGCDITAEKINPKDHRFQILISLMLSSQTKDQMTHAAALKLQKIEGGFNAPNLM 82
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
KAD TI I V F RK +++ AK C KYD D+P +L E G+G KM +
Sbjct: 83 KADRETILSCISCVGFANRKTDYIREAAKRCHEKYDDDVPKTLKEFTEFKGVGIKMGTLA 142
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M W GI VD HVHRI N LGWV KT+ P++T ALQ+ LPK+ W +N
Sbjct: 143 MARCWNEQIGIGVDVHVHRISNLLGWV-------KTNHPDETETALQKVLPKDIWPEVNH 195
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTS 218
LVGFGQT+C + +C C +S C E + S
Sbjct: 196 CLVGFGQTVCGSKKRKCEECPISSTCRYYLGEDTQS 231
>gi|242780466|ref|XP_002479601.1| DNA repair protein Ntg1, putative [Talaromyces stipitatus ATCC
10500]
gi|218719748|gb|EED19167.1| DNA repair protein Ntg1, putative [Talaromyces stipitatus ATCC
10500]
Length = 448
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 126/236 (53%), Gaps = 43/236 (18%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL----LQNGLHTAEA 60
PV ++G E S PPK++RF L++ +LSS TKD V A+QRL Q G T E
Sbjct: 155 PVDTMGCAELHWRSSPPKDQRFQTLVALMLSSQTKDTVTAVAMQRLHTELAQGGGSTNET 214
Query: 61 -------------------IDKADEA------------TIKDLIYPVAFYTRKACNMKKI 89
+K D + +LI V F+ K +K++
Sbjct: 215 KPLIKKEEDDDDKDGIKFNHEKKDSTLTVQNMLAVSPERLNELIRTVGFHNNKTKYIKQV 274
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
A I +Y+ DIPS+ EL+ALPG+GPKMA + M+ W +GI VD HVHRI N GW
Sbjct: 275 ANILRDQYNSDIPSTPVELMALPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGWH 334
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
T T +PE+TR ALQ WLP+++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 335 T-------TKTPEETRIALQSWLPRDKWHEINKLLVGLGQTVCLPVGRRCGECELA 383
>gi|70988789|ref|XP_749248.1| DNA repair protein Ntg1 [Aspergillus fumigatus Af293]
gi|66846879|gb|EAL87210.1| DNA repair protein Ntg1, putative [Aspergillus fumigatus Af293]
Length = 432
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 125/232 (53%), Gaps = 39/232 (16%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAEA- 60
PV ++G E S P+++RF L++ +LSS TKD V A+QRL L NG AE
Sbjct: 164 PVDTMGCAELYWRSSSPRDKRFQTLIALMLSSQTKDTVTAVAMQRLHTELGNGRALAEDP 223
Query: 61 ---------IDKADEATIKD------------------LIYPVAFYTRKACNMKKIAKIC 93
ID +KD LI V F+ K +K A+I
Sbjct: 224 IVKKEEQEDIDLKSSQPLKDSTLNLENILAVSPEKLNELIRTVGFHNNKTKYIKAAAEIL 283
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+Y+ DIPS+ +EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW
Sbjct: 284 RDQYNSDIPSTAEELMKLPGVGPKMAYLCMSAAWGKDEGIGVDVHVHRITNLWGW----- 338
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
KT +PE+TR AL+ WLP+++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 339 --HKTKTPEETRMALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCGECDLA 388
>gi|159128662|gb|EDP53776.1| DNA repair protein, putative [Aspergillus fumigatus A1163]
Length = 432
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 125/232 (53%), Gaps = 39/232 (16%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAEA- 60
PV ++G E S P+++RF L++ +LSS TKD V A+QRL L NG AE
Sbjct: 164 PVDTMGCAELYWRSSSPRDKRFQTLIALMLSSQTKDTVTAVAMQRLHTELGNGRALAEDP 223
Query: 61 ---------IDKADEATIKD------------------LIYPVAFYTRKACNMKKIAKIC 93
ID +KD LI V F+ K +K A+I
Sbjct: 224 IVKKEEQEDIDLKSSQPLKDSTLNLENILAVSPEKLNELIRTVGFHNNKTKYIKAAAEIL 283
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+Y+ DIPS+ +EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW
Sbjct: 284 RDQYNSDIPSTAEELMKLPGVGPKMAYLCMSAAWGKDEGIGVDVHVHRITNLWGW----- 338
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
KT +PE+TR AL+ WLP+++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 339 --HKTKTPEETRMALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCGECDLA 388
>gi|190345325|gb|EDK37193.2| hypothetical protein PGUG_01291 [Meyerozyma guilliermondii ATCC
6260]
Length = 455
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 128/229 (55%), Gaps = 22/229 (9%)
Query: 2 KTLEPVYSLGVDETDSSL------PPKERRFAVLLSALLSSLTKDKVA--------DGAL 47
K + PV ++G + S + P+ RF +L+S +LSS TKD+V D +
Sbjct: 199 KFMSPVDTMGCERIPSKIRPHGFDSPRTYRFQLLISLMLSSQTKDEVNFAAIKTLDDELM 258
Query: 48 QRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDE 107
+R NGL EA+ E I I V F+ RKA +K+ +++ + GDIP ++ +
Sbjct: 259 KRGFPNGL-CLEAVLATSEQDINQCIQKVGFHHRKAGYIKRASQMLHDNHSGDIPDNIRD 317
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREA 167
++ALPG+GPKM +++ GW+ +GI VD H+HR+ GWV+ K +PEQTR
Sbjct: 318 IVALPGVGPKMGYLLLQRGWYKNEGIGVDVHIHRLAQMWGWVS-----AKARTPEQTRLE 372
Query: 168 LQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKE 214
L+ WLP+ W INP+LVGFGQ IC P C +CT+ + C A K+
Sbjct: 373 LESWLPRRLWGDINPILVGFGQVICPPNYGNCDICTLGKQKLCKGANKK 421
>gi|322698383|gb|EFY90154.1| putative DNA repair protein NTG1 [Metarhizium acridum CQMa 102]
Length = 399
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 123/211 (58%), Gaps = 20/211 (9%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKAD 65
D + PK++RF L++ +LSS TKD V A++RL GL+ + D
Sbjct: 154 DRNASPKDQRFHTLIALMLSSQTKDTVNAVAMKRLQTELPPHKPGAPPGLNLDNVL-AVD 212
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
+ +LI+ V F+ K +K+ A I K+ GDIP +++ L +LPG+GPKMA++ ++
Sbjct: 213 ANLLNELIWAVGFHNNKTKYIKQAAVILRDKWKGDIPDTIEGLTSLPGVGPKMAHLCLSA 272
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +GI VD HVHRI N GW KT +PE+TR ALQ WLP+++W IN LLV
Sbjct: 273 AWDRTEGIGVDVHVHRITNLWGW-------NKTKNPEETRRALQSWLPRDKWREINWLLV 325
Query: 186 GFGQTICTPLRPRCGMCT--VSEYCPSAFKE 214
GFGQ +C P+ RCG C +S C +A ++
Sbjct: 326 GFGQAVCLPVGRRCGDCDLGLSGLCKAAERK 356
>gi|396081889|gb|AFN83503.1| endonuclease III [Encephalitozoon romaleae SJ-2008]
Length = 265
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/233 (41%), Positives = 130/233 (55%), Gaps = 24/233 (10%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL------------- 50
+ PV ++G T +ERRF +L+S LLSS TKD+V A++RL
Sbjct: 27 VSPVDTMGCFITPPYRTEEERRFHILVSLLLSSQTKDEVTHEAMERLRELLPENAAIDDN 86
Query: 51 LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLA 110
++ GL T E I + I + I V F+ +KA N+KKIA+I K +P +++L +
Sbjct: 87 IRRGL-TIENIVNSSVDHINECIKRVGFHNKKAENLKKIAEILKKK---GLPKRMEDLTS 142
Query: 111 LPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQR 170
LPGIG KMA + M V GI VDTHVHRI NR+G V KT E TRE L++
Sbjct: 143 LPGIGNKMAILYMNHACGKVVGISVDTHVHRISNRIGLV-------KTRDVEDTREGLEK 195
Query: 171 WLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
+PK+EW IN +LVG+GQTIC RPRC C + CPS+ S+ K +
Sbjct: 196 IIPKKEWKTINRILVGYGQTICVARRPRCEECCIRSRCPSSLFNRKASALKEE 248
>gi|163781957|ref|ZP_02176957.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
gi|159883177|gb|EDP76681.1| endonuclease III [Hydrogenivirga sp. 128-5-R1-1]
Length = 213
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 116/183 (63%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ ALLS+ T+D+ ++ + + + E I K +++LIYPV FY KA
Sbjct: 36 FKVLICALLSTRTRDETTAKVCEKFFKK-VKSPEDILKLPLKELEELIYPVGFYRNKAKQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+A+I + + G++P + +ELL LPG+G K+AN+V+ G +++ ICVDTHVHRI NR
Sbjct: 95 LKKLAEILIRDFGGEVPKTREELLRLPGVGRKVANLVLADG-YSIPAICVDTHVHRITNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
V KT +PE+T + L LP+E W+ IN LLV FGQ ICTP RPRCG C +
Sbjct: 154 WCLV-------KTRTPEETEKKLMEVLPEEYWIVINRLLVAFGQRICTPQRPRCGECPIE 206
Query: 206 EYC 208
+C
Sbjct: 207 NFC 209
>gi|339500707|ref|YP_004698742.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta caldaria DSM
7334]
gi|338835056|gb|AEJ20234.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta caldaria DSM
7334]
Length = 229
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 116/195 (59%), Gaps = 14/195 (7%)
Query: 14 ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLI 73
ETD+ P + VL+S ++S TKD V + +RLL T EA+ K + I I
Sbjct: 40 ETDTYRP-----WVVLVSTVISLRTKDAVTLSSSRRLLAKA-PTPEALVKLTKDEIAQSI 93
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
YP FY KA ++ IA + + +YDG +P +L+ LL+LPG+G K AN+V++ G F I
Sbjct: 94 YPAGFYRTKAEHLHTIADLLIHQYDGKVPDTLEVLLSLPGVGRKTANLVLSEG-FGQDAI 152
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
CVDTHVHRICNR GWV T PE+T +AL+ LP+ W RIN LLV FGQ IC
Sbjct: 153 CVDTHVHRICNRTGWVV-------TKVPEETEQALRHILPRPYWRRINWLLVQFGQQICR 205
Query: 194 PLRPRCGMCTVSEYC 208
P P C C ++ +C
Sbjct: 206 PQSPLCSQCPLTSFC 220
>gi|164424761|ref|XP_960699.2| hypothetical protein NCU06654 [Neurospora crassa OR74A]
gi|157070649|gb|EAA31463.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 815
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 18/215 (8%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA---------DEATIKDL 72
++RRF L++ +LSS TKD V A+ RL + AE + + A + +L
Sbjct: 219 RDRRFHTLVALMLSSQTKDTVNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNEL 278
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWFNV 130
I V F+ K +K+ A+I +Y+ DIP +++ L++LPG+GPKMA++ M+ GW V
Sbjct: 279 IGKVGFHNNKTRYLKQAAEILRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRV 338
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GI VD HVHRI N GW P T +PE+TR ALQ WLP+++W IN LLVGFGQ+
Sbjct: 339 EGIGVDVHVHRITNLWGWQNPP-----TKTPEETRLALQSWLPRDKWKEINWLLVGFGQS 393
Query: 191 ICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSK 223
+C P+ +CG C + C +A ++ T K +
Sbjct: 394 VCLPVGRKCGDCELGLRGLCKAAERKKVTEGRKRR 428
>gi|50310813|ref|XP_455429.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644565|emb|CAG98137.1| KLLA0F07711p [Kluyveromyces lactis]
Length = 391
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 119/206 (57%), Gaps = 12/206 (5%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH--------TAEAIDKADEAT 68
S++ PK R +L+S +LSS TKD+V A+ +++ + T ++ K +E
Sbjct: 126 SNMQPKNYRLQLLVSLMLSSQTKDEVNAKAMHNIMEYCMEELGDPEGITLGSLLKIEEKI 185
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ IY V F+TRKA +KK A + ++DGD+P++++ ++LPG+GPKM + + W
Sbjct: 186 LDKEIYSVGFHTRKASYIKKAAVMLRDQFDGDVPTTIEGFMSLPGVGPKMGYLALQKSWA 245
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
+ GI VD HV R+ WV K +PE TR+ L+ WLP+ W INP+LVGFG
Sbjct: 246 KIDGIGVDVHVDRLAKMWKWVDPKVCK----TPEHTRKQLESWLPRSLWYEINPVLVGFG 301
Query: 189 QTICTPLRPRCGMCTVSEYCPSAFKE 214
Q +C P RC +C V++ CP K+
Sbjct: 302 QVLCMPRSKRCELCLVNDICPGVDKK 327
>gi|18307439|emb|CAD21502.1| related to DNA repair protein NTG1 [Neurospora crassa]
Length = 835
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 126/215 (58%), Gaps = 18/215 (8%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA---------DEATIKDL 72
++RRF L++ +LSS TKD V A+ RL + AE + + A + +L
Sbjct: 239 RDRRFHTLVALMLSSQTKDTVNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNEL 298
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWFNV 130
I V F+ K +K+ A+I +Y+ DIP +++ L++LPG+GPKMA++ M+ GW V
Sbjct: 299 IGKVGFHNNKTRYLKQAAEILRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRV 358
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GI VD HVHRI N GW P T +PE+TR ALQ WLP+++W IN LLVGFGQ+
Sbjct: 359 EGIGVDVHVHRITNLWGWQNPP-----TKTPEETRLALQSWLPRDKWKEINWLLVGFGQS 413
Query: 191 ICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSK 223
+C P+ +CG C + C +A ++ T K +
Sbjct: 414 VCLPVGRKCGDCELGLRGLCKAAERKKVTEGRKRR 448
>gi|68476685|ref|XP_717635.1| hypothetical protein CaO19.5098 [Candida albicans SC5314]
gi|68476832|ref|XP_717561.1| hypothetical protein CaO19.12564 [Candida albicans SC5314]
gi|46439276|gb|EAK98596.1| hypothetical protein CaO19.12564 [Candida albicans SC5314]
gi|46439353|gb|EAK98672.1| hypothetical protein CaO19.5098 [Candida albicans SC5314]
Length = 320
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 116/192 (60%), Gaps = 13/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA-------EAIDKADEATIKDLI 73
PK RF +L+S +LSS TKD+V A++ L NGL E++ K E+ I I
Sbjct: 95 PKIYRFQLLISLMLSSQTKDEVNYEAMKNL-HNGLLKVHPDGLCIESVLKLSESEIDAYI 153
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V F+ RKA ++K I + +DGDIP +++E++ALPG+GPKM +++ GW GI
Sbjct: 154 KKVGFHNRKAQYIRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGI 213
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD H+HR+ GWV+ K ++PE+ R LQ WLPK+ W INPL+VGFGQ IC
Sbjct: 214 GVDVHLHRLALMWGWVS-----PKANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICV 268
Query: 194 PLRPRCGMCTVS 205
P C +CT++
Sbjct: 269 PRAANCDICTLA 280
>gi|121711106|ref|XP_001273169.1| DNA repair protein, putative [Aspergillus clavatus NRRL 1]
gi|119401319|gb|EAW11743.1| DNA repair protein, putative [Aspergillus clavatus NRRL 1]
Length = 421
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 116/213 (54%), Gaps = 35/213 (16%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLL---------QNGLHTAEAIDKADE----- 66
P++RRF L++ +LSS TKD V A+QRL Q+ + E ++ D
Sbjct: 172 PRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGDSNVHQDLIIKKEELEDEDSKIPER 231
Query: 67 --------------ATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALP 112
A + +LI V F+ K +K A+I +Y DIPSS EL+ LP
Sbjct: 232 DSTLNLENILAVSPAKLNELIRTVGFHNNKTKYIKATAEIIRDQYKSDIPSSATELMKLP 291
Query: 113 GIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWL 172
G+GPKMA + M+ W +GI VD HVHRI N GW KT +PE+TR AL+ WL
Sbjct: 292 GVGPKMAFLCMSAAWGKDEGIGVDVHVHRITNLWGW-------HKTKTPEETRMALESWL 344
Query: 173 PKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
P+E+W IN LLVG GQT+C P+ RCG C ++
Sbjct: 345 PREKWHEINKLLVGLGQTVCLPVGRRCGECDLA 377
>gi|7021393|gb|AAF35322.1|AF222908_2 Ntg1 [Candida albicans]
Length = 311
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 116/192 (60%), Gaps = 13/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA-------EAIDKADEATIKDLI 73
PK RF +L+S +LSS TKD+V A++ L NGL E++ K E+ I I
Sbjct: 95 PKIYRFQLLISLMLSSQTKDEVNYEAMKNL-HNGLLKVHPDGLCIESVLKLSESEIDAYI 153
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V F+ RKA ++K I + +DGDIP +++E++ALPG+GPKM +++ GW GI
Sbjct: 154 KKVGFHNRKAQYIRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGI 213
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD H+HR+ GWV+ K ++PE+ R LQ WLPK+ W INPL+VGFGQ IC
Sbjct: 214 GVDVHLHRLALMWGWVS-----PKANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICV 268
Query: 194 PLRPRCGMCTVS 205
P C +CT++
Sbjct: 269 PRAANCDICTLA 280
>gi|336472474|gb|EGO60634.1| hypothetical protein NEUTE1DRAFT_144022 [Neurospora tetrasperma
FGSC 2508]
gi|350294301|gb|EGZ75386.1| hypothetical protein NEUTE2DRAFT_105079 [Neurospora tetrasperma
FGSC 2509]
Length = 814
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 118/194 (60%), Gaps = 16/194 (8%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA---------DEATIKDL 72
++RRF L++ +LSS TKD V A+ RL + AE + + A + +L
Sbjct: 219 RDRRFHTLVALMLSSQTKDTVNAEAMLRLKKELPPHAEGAEPGLNLENMLAVEPAVLNEL 278
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWFNV 130
I V F+ K +K+ A+I +Y+ DIP +++ L++LPG+GPKMA++ M+ GW V
Sbjct: 279 IGKVGFHNNKTKYLKQAAEILRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSADNGWNRV 338
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GI VD HVHRI N GW P T +PE+TR ALQ WLP+++W IN LLVGFGQ+
Sbjct: 339 EGIGVDVHVHRITNLWGWQNPP-----TKTPEETRLALQSWLPRDKWKEINWLLVGFGQS 393
Query: 191 ICTPLRPRCGMCTV 204
IC P+ +CG C +
Sbjct: 394 ICLPVGRKCGDCEL 407
>gi|241949395|ref|XP_002417420.1| DNA base excision repair N-glycosylase, putative; DNA-(apurinic or
apyrimidinic site) lyase, putative; endonuclease III
homolog, putative [Candida dubliniensis CD36]
gi|223640758|emb|CAX45072.1| DNA base excision repair N-glycosylase, putative [Candida
dubliniensis CD36]
Length = 320
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 128/228 (56%), Gaps = 20/228 (8%)
Query: 2 KTLEPVYSLGVDETDSSLP-------PKERRFAVLLSALLSSLTKDKVADGALQRLLQNG 54
K L PV + G + +++ PK RF +L+S +LSS TKD+V A++ L +
Sbjct: 69 KFLAPVDTQGCERMPNAINANIKLRNPKVYRFQLLISLMLSSQTKDEVNYQAMKNLHEGL 128
Query: 55 LHT------AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDEL 108
L E++ K EA I I V F+ RKA +KK I + + GDIP +++E+
Sbjct: 129 LKVHPDGLCIESLSKLSEAEIDSYIKKVGFHNRKAQYIKKTCSILMENFGGDIPKTIEEI 188
Query: 109 LALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREAL 168
+ALPG+GPKM +++ W G+ VD H+HR+ GWV+ QK ++PE+ R L
Sbjct: 189 VALPGVGPKMGFLLLQSAWGINAGVGVDVHLHRLALMWGWVS-----QKANTPEKARLEL 243
Query: 169 QRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKE 214
Q WLPK W INPL+VGFGQ IC P C +C+++ C +A K+
Sbjct: 244 QEWLPKNYWADINPLVVGFGQVICVPRAANCDICSLARDGLCKNANKK 291
>gi|119497831|ref|XP_001265673.1| DNA repair protein, putative [Neosartorya fischeri NRRL 181]
gi|119413837|gb|EAW23776.1| DNA repair protein, putative [Neosartorya fischeri NRRL 181]
Length = 432
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 39/232 (16%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAE-- 59
PV ++G E S P+++RF L++ +LSS TKD V A+QRL L NG AE
Sbjct: 164 PVDTMGCAELYWRSSSPRDKRFQTLIALMLSSQTKDTVTAVAMQRLHTELGNGRAPAEDP 223
Query: 60 AIDKADEATI--------------------------KDLIYPVAFYTRKACNMKKIAKIC 93
+ K ++ I +LI V F+ K +K A+I
Sbjct: 224 IVKKEEQEDIDLKSSQPQRDSTLNLENILAVSPEKLNELIRTVGFHNNKTKYIKAAAEIL 283
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+Y+ DIPS+ +EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW
Sbjct: 284 RDQYNSDIPSTAEELMKLPGVGPKMAYLCMSAAWGKDEGIGVDVHVHRITNLWGW----- 338
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
KT +PE+TR AL+ WLP+++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 339 --HKTKTPEETRMALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCGECDLA 388
>gi|154304871|ref|XP_001552839.1| hypothetical protein BC1G_09021 [Botryotinia fuckeliana B05.10]
Length = 437
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 125/227 (55%), Gaps = 24/227 (10%)
Query: 10 LGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAE 59
LG D D PK +R+ L + +LSS TKD A+ RL GL T +
Sbjct: 152 LGQDTVD----PKTKRYHTLTALMLSSQTKDTTNAVAMNRLYTELPAHKEGAPIGL-TLD 206
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
I D + +LI+ V F+ K +K A+I +++GDIP +++ L++LPG+GPKMA
Sbjct: 207 NILAVDPKLLNELIWVVGFHNNKTKYIKAAAEILRDQWNGDIPDTIEGLMSLPGVGPKMA 266
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
+ M+ W +GI VD HVHRI N GW T G PE+TR ALQ WLPKE W
Sbjct: 267 YLCMSSAWGRTEGIGVDVHVHRITNMWGWHTTKG-------PEETRLALQAWLPKELWHE 319
Query: 180 INPLLVGFGQTICTPLRPRCGMCT--VSEYCPSAFKESSTSSSKSKK 224
IN LLVGFGQT+C P+ +CG C ++ C +A + T K K+
Sbjct: 320 INWLLVGFGQTVCLPVGKKCGSCELGMNGLCKAADRSKVTIGRKIKE 366
>gi|118395856|ref|XP_001030273.1| HhH-GPD superfamily base excision DNA repair protein [Tetrahymena
thermophila]
gi|89284570|gb|EAR82610.1| HhH-GPD superfamily base excision DNA repair protein [Tetrahymena
thermophila SB210]
Length = 371
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 124/210 (59%), Gaps = 15/210 (7%)
Query: 6 PVYSLGVD-ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +LG D + D SLP +R F L++ +LS TKD+ D ++++++ + IDKA
Sbjct: 163 PVDTLGCDLQGDESLPTNDRNFQKLMAIILSVQTKDETTDLVMKKVVKEKI----TIDKA 218
Query: 65 DE---ATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
E + +K++I V F +K +K A++ Y+ IP ++L+ + GIGPK+AN+
Sbjct: 219 VEIPSSELKEIIKQVNFNGKKVEYIKNAAEVIKNTYNYVIPDQYEDLIKIKGIGPKVANL 278
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
+ + GI VDTHVHRI NRL WV+ T +PEQTR L++ L K+ W +N
Sbjct: 279 FLQCAYNKTVGIAVDTHVHRISNRLEWVS-------TKTPEQTRIELEKLLDKKYWEDVN 331
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
LLVG+GQ++C P P+C +C V + CP
Sbjct: 332 NLLVGYGQSVCKPQNPQCQICPVKDKCPEG 361
>gi|448104103|ref|XP_004200201.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
gi|359381623|emb|CCE82082.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
Length = 364
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/205 (42%), Positives = 118/205 (57%), Gaps = 17/205 (8%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGAL--------QRLLQNGLHTAEAIDKADEAT 68
S + P+ RF +L+S +LSS TKD+V A+ R ++GL T EA+ EA
Sbjct: 127 SEMKPRVYRFQLLVSLILSSQTKDEVTYNAMVNLNRHLMDRGFEDGL-TLEAVLTLSEAE 185
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ LI V F+ +KA + K A I D+P ++DE+ LPG+GPKMA +++ GW
Sbjct: 186 VDGLISKVGFHRKKAAYILKSAAILKETAGSDVPQTVDEITRLPGVGPKMAYLLIQRGWN 245
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
GI VD HVHR+ WV K+ SPE+TR ALQ WLPK+ W INPLLVGFG
Sbjct: 246 INDGIGVDVHVHRLAQMWRWVP------KSDSPERTRLALQAWLPKKFWPEINPLLVGFG 299
Query: 189 QTICTPLRPRCGMCTVS--EYCPSA 211
Q +C P C +CT++ CPSA
Sbjct: 300 QVVCVPRAGNCDICTLATKRLCPSA 324
>gi|255939103|ref|XP_002560321.1| Pc15g00960 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584943|emb|CAP82982.1| Pc15g00960 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 428
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 115/209 (55%), Gaps = 31/209 (14%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAEAID--------------- 62
P +RRF L++ +LSS TKD V A+QRL L +G A+ I
Sbjct: 193 PIDRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGTAPAQDIKIKQEDDDSKTVDSTL 252
Query: 63 ------KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGP 116
D + +LI V F+ K +K A I ++ GDIPS+ + L+ALPG+GP
Sbjct: 253 NLNNILSVDPTRLNELIRTVGFHNNKTKYIKATALILRDQHGGDIPSTPEGLMALPGVGP 312
Query: 117 KMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEE 176
KMA + M+ W GI VD HVHRI N GW KT +PE+TREALQ WLP+ +
Sbjct: 313 KMAYLCMSAAWGEHVGIGVDVHVHRITNLWGW-------NKTKTPEETREALQSWLPRNK 365
Query: 177 WVRINPLLVGFGQTICTPLRPRCGMCTVS 205
W IN LLVG GQT+C P++ RCG C ++
Sbjct: 366 WHEINHLLVGLGQTVCLPVKRRCGDCELA 394
>gi|452944081|ref|YP_007500246.1| DNA-(apurinic or apyrimidinic site) lyase, MutY [Hydrogenobaculum
sp. HO]
gi|452882499|gb|AGG15203.1| DNA-(apurinic or apyrimidinic site) lyase, MutY [Hydrogenobaculum
sp. HO]
Length = 224
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 114/193 (59%), Gaps = 9/193 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ A+LS+ TKD+ +RL + + E + E +K+LIY V FY KA N
Sbjct: 36 FRVLVCAILSTRTKDETTAKVCERLFVK-VKSIEDLYNIKEEELKELIYGVGFYNTKAKN 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++AKI + YD IP ++L+ LPG+G K+AN+V+ G F + ICVD HVHRI NR
Sbjct: 95 LKELAKIIVQSYDSKIPKEKEKLMELPGVGLKVANLVLAEG-FGIPAICVDVHVHRITNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
V KT +PEQT EAL+ LPK+ W+ IN LV FGQ IC P +P C +C +
Sbjct: 154 WCLV-------KTKTPEQTEEALKNILPKKYWIDINRYLVSFGQRICKPTKPLCEICPIE 206
Query: 206 EYCPSAFKESSTS 218
+C + S S
Sbjct: 207 RFCGKCIDKKSRS 219
>gi|320582064|gb|EFW96282.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase [Ogataea
parapolymorpha DL-1]
Length = 383
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 17/201 (8%)
Query: 25 RFAVLLSALLSSLTKDKV--------ADGALQRLLQNGLHTAEAIDKADEATIKDLIYPV 76
RF L+S +LSS TKD+V D + + ++GL + EAI DE + LIY V
Sbjct: 153 RFQCLISLMLSSQTKDEVNFQVMKILQDYFISKGYEHGL-SLEAILDIDELVLDQLIYKV 211
Query: 77 AFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVD 136
F+ RKA +K+ A I KY+G+IP +++E+ + PG+GPKM +++ + W GI VD
Sbjct: 212 GFHRRKATYIKQTANILHEKYNGEIPRTIEEITSFPGVGPKMGFLLLQIAWNINTGIGVD 271
Query: 137 THVHRICNRLGWVTQPGTKQKTSSPEQTREALQR--WLPKEEWVRINPLLVGFGQTICTP 194
TH+ R+ WV P + K SPE R + W KEEW RINP+LVGFGQ +C P
Sbjct: 272 THMQRMAKIFKWV--PAS--KNMSPEYVRRCFESMLWDHKEEWSRINPILVGFGQVVCLP 327
Query: 195 LRPRCGMCTVSE--YCPSAFK 213
RPRC +CT+S CP+ K
Sbjct: 328 QRPRCDVCTLSRTGICPAVDK 348
>gi|429123460|ref|ZP_19183993.1| endonuclease III [Brachyspira hampsonii 30446]
gi|426280734|gb|EKV57744.1| endonuclease III [Brachyspira hampsonii 30446]
Length = 233
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 112/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS TKD A RL + + + + K E I+ LIYPV FY KA N
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDML-KLTEEEIEKLIYPVGFYKVKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++K+ + Y+G +P +DELL L G+G K+AN+V+T F+ GICVDTHVHRI NR
Sbjct: 96 ILEVSKMIIDDYNGQVPDEIDELLKLKGVGRKVANLVVTEA-FDKDGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PE+T AL+ LPKE W N LV +GQ +C P+ P C CTVS
Sbjct: 155 FGYV-------HTKTPEETEFALRDKLPKEYWRIYNDTLVVYGQNLCKPISPLCQKCTVS 207
Query: 206 EYC 208
+YC
Sbjct: 208 QYC 210
>gi|432328581|ref|YP_007246725.1| putative endoIII-related endonuclease [Aciduliprofundum sp.
MAR08-339]
gi|432135290|gb|AGB04559.1| putative endoIII-related endonuclease [Aciduliprofundum sp.
MAR08-339]
Length = 209
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ ++S TKD+V +RL + ++ A I LIYP FY +KA
Sbjct: 27 FRVLIATVISQRTKDEVTYSVAERLFEK-YPDPSSLKNAPVDEIARLIYPAGFYKQKARK 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+IA+I +YDG +P +LDELL LPG+G K AN+V++ F+ I VD HVHRI NR
Sbjct: 86 IKEIARIIDEEYDGVVPRTLDELLKLPGVGRKTANIVLS-RCFDQDVIAVDVHVHRISNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV+ T +PE+T L + LPK+ W IN LLV FG+TIC P+ P+C C VS
Sbjct: 145 LGWVS-------TRTPEETERELMKILPKKYWREINELLVMFGRTICRPVGPKCDECPVS 197
Query: 206 EYC 208
++C
Sbjct: 198 DFC 200
>gi|445061978|ref|ZP_21374435.1| endonuclease III [Brachyspira hampsonii 30599]
gi|444506641|gb|ELV06946.1| endonuclease III [Brachyspira hampsonii 30599]
Length = 229
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 112/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS TKD A RL + + + + K E I+ LIYPV FY KA N
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDML-KLTEEEIEKLIYPVGFYKVKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++K+ + ++G +P +DELL L G+G K+AN+V+T F+ GICVDTHVHRI NR
Sbjct: 96 ILEVSKMIIDDFNGQVPDEIDELLKLKGVGRKVANLVVTEA-FDKDGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PE+T AL+ LPKE W N LV +GQ +C P+ P C CTVS
Sbjct: 155 FGYVN-------TKTPEETEFALRDKLPKEYWRVYNDTLVVYGQNLCKPISPLCSKCTVS 207
Query: 206 EYC 208
+YC
Sbjct: 208 QYC 210
>gi|188997187|ref|YP_001931438.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932254|gb|ACD66884.1| DNA-(apurinic or apyrimidinic site) lyase [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 215
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 112/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS TKD++ A RL + T E I K E I LIYPV FY KA
Sbjct: 36 FKILISTILSLRTKDQITAQASDRLFKVA-DTPEKILKLSEKEIVKLIYPVGFYRNKAKI 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I+KI + K++ +P L+ LL+ G+G K AN+V++ G F ICVD HVHRI NR
Sbjct: 95 IKEISKILVEKFNSKVPDDLETLLSFKGVGRKTANLVLSEG-FGKPAICVDVHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V KT +PE+T L + LPK+ W IN +LV FGQTIC P++P+C C +
Sbjct: 154 IGLV-------KTKNPEETEFKLMKILPKKYWKDINFVLVAFGQTICKPVKPKCKECPIV 206
Query: 206 EYC 208
+YC
Sbjct: 207 KYC 209
>gi|156839963|ref|XP_001643667.1| hypothetical protein Kpol_1040p22 [Vanderwaltozyma polyspora DSM
70294]
gi|156114287|gb|EDO15809.1| hypothetical protein Kpol_1040p22 [Vanderwaltozyma polyspora DSM
70294]
Length = 429
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 125/212 (58%), Gaps = 14/212 (6%)
Query: 11 GVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH--------TAEAID 62
G+++ D + P R VL+ +LSS TKD++ A+ + + ++ T +A+
Sbjct: 169 GIEKED--ILPINYRLQVLIGVMLSSQTKDEINAAAMHNITEYCINELEIPEGITIDALL 226
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ D+ + +LI+ V F++RKA +K+ A I K++ DIP++++ LLALPG+GPKM +
Sbjct: 227 EIDQEILDELIHSVGFHSRKAKYLKETALILKEKHNSDIPTNIEGLLALPGVGPKMGYLT 286
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ W + GICVD HVHR+ WV + +K +PE TR+ L+ WLP++ W IN
Sbjct: 287 LQKAWGKIDGICVDVHVHRLAKMWKWVDE----KKCKTPEHTRKELESWLPRQLWYEINS 342
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKE 214
+LVGFGQ IC RC +C ++ C + K+
Sbjct: 343 VLVGFGQVICMSRGKRCDICLANDVCNARDKK 374
>gi|148656645|ref|YP_001276850.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus sp. RS-1]
gi|148568755|gb|ABQ90900.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus sp. RS-1]
Length = 219
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD + RL T E + E I LIYPV FY KA
Sbjct: 37 FRILIATILSLRTKDTMTAVVAPRLFAAA-DTPEKMLALGEDEIAALIYPVGFYRNKART 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ I +I + +Y G++P+ LD LLALPG+G K AN+V+T G F++ GICVDTHVHRICNR
Sbjct: 96 IRTICQILIDQYGGEVPADLDALLALPGVGRKTANLVLTAG-FDLPGICVDTHVHRICNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T +PE+T L+ LP E W IN LLV GQ IC P PRC +C ++
Sbjct: 155 WGYV-------QTRTPEETEMRLREILPPEYWKEINGLLVTLGQNICHPTSPRCSVCPLA 207
Query: 206 EYC 208
C
Sbjct: 208 HLC 210
>gi|237756607|ref|ZP_04585124.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691238|gb|EEP60329.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
Length = 215
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS TKD+ A RL + T E I K E I++LIYPV FY KA
Sbjct: 36 FKILISTILSLRTKDQTTAQASDRLFKVA-DTPEKILKLSEKEIEELIYPVGFYRNKAKI 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I+KI + K++ +P L+ LL+ G+G K AN+V++ G F ICVD HVHRI NR
Sbjct: 95 IKEISKILVEKFNSKVPDDLETLLSFKGVGRKTANLVLSEG-FGKPAICVDVHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V KT +PE+T L LPK+ W IN + V FGQTIC P++P+C C +
Sbjct: 154 IGLV-------KTKNPEETEFKLMEILPKKYWKDINFVFVAFGQTICKPVKPKCNQCPII 206
Query: 206 EYC 208
+YC
Sbjct: 207 KYC 209
>gi|340923756|gb|EGS18659.1| hypothetical protein CTHT_0052650 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 471
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 127/222 (57%), Gaps = 24/222 (10%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATIK 70
P++RRF L++ +LSS TKD V A+ RL GL+ E + D +
Sbjct: 207 PRDRRFQTLVALMLSSQTKDTVNAEAMARLHNELPPHKPGAPPGLNL-ENMLAVDPKLLN 265
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM--TLGWF 128
+LI V F+ K +K+ A+I K+ GDIP +++ L +LPG+GPKMA++ M T GW
Sbjct: 266 ELIGKVGFHNLKTKYLKQTAEILRDKFGGDIPPTVETLCSLPGVGPKMAHLCMSATYGWN 325
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
V+GI VD HVHRI N GW +T +PE TR+AL+ WLP+++W IN LLVGFG
Sbjct: 326 KVEGIGVDVHVHRITNLWGW-------NETKTPEDTRKALESWLPRDKWKEINWLLVGFG 378
Query: 189 QTICTPLRP--RCGMCTVS--EYCPSAFKESSTSSSKSKKSE 226
QT+C P++ RCG C + C SA + K ++ E
Sbjct: 379 QTVCGPVKGSRRCGECELGLRGLCKSAERGKVNEGRKRREME 420
>gi|238494694|ref|XP_002378583.1| DNA repair protein Ntg1, putative [Aspergillus flavus NRRL3357]
gi|220695233|gb|EED51576.1| DNA repair protein Ntg1, putative [Aspergillus flavus NRRL3357]
Length = 347
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 128/240 (53%), Gaps = 40/240 (16%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL---LQNG----LHTAEAIDKADEATIK--- 70
P++RRF L++ +LSS TKD V A+QRL L +G + T+ ++ DE T K
Sbjct: 103 PRDRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEK 162
Query: 71 ---------------------DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELL 109
+LI V F+ K +K A I +Y DIPS+ +EL+
Sbjct: 163 PLRDSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELM 222
Query: 110 ALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQ 169
LPG+GPKMA + M+ W +GI VD HVHRI N GW KT +PE TR+AL+
Sbjct: 223 KLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGW-------NKTKTPEDTRKALE 275
Query: 170 RWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFKESSTSSSKSKKSES 227
WLPK++W IN LLVG GQT+C P+ +CG C + ++ C S + +S K ES
Sbjct: 276 SWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDCDLAGTKLCKSEIRGLVSSKKVDAKEES 335
>gi|444314257|ref|XP_004177786.1| hypothetical protein TBLA_0A04740 [Tetrapisispora blattae CBS 6284]
gi|387510825|emb|CCH58267.1| hypothetical protein TBLA_0A04740 [Tetrapisispora blattae CBS 6284]
Length = 447
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 12/204 (5%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGAL---QRLLQNGLH-----TAEAIDKADEATIK 70
+ P R +L+ +LS+ TKD+V A+ R + LH T E + + D+ +
Sbjct: 168 IKPINYRLQLLVGVMLSAQTKDEVTAQAMLNITRYCIDELHNPAGITLETLLEIDQNVLD 227
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+TRKA +K+ AK ++D DIP+ +D LL+LPG+GPKM + + W +
Sbjct: 228 ELIHSVGFHTRKAKFIKETAKELQERFDSDIPTDIDGLLSLPGVGPKMGYLALHKAWGKL 287
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GICVD HVHR+ WV +K+ +PE TR+ALQ WLP+ W IN +LVGFGQ
Sbjct: 288 DGICVDVHVHRLSKLFNWV----DPKKSKTPEHTRKALQEWLPRSLWYEINTVLVGFGQV 343
Query: 191 ICTPLRPRCGMCTVSEYCPSAFKE 214
IC RC +C + C + K+
Sbjct: 344 ICMSKGRRCDICLANTVCNAVDKK 367
>gi|325969884|ref|YP_004246075.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta globus
str. Buddy]
gi|324025122|gb|ADY11881.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta globus
str. Buddy]
Length = 220
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 115/184 (62%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL++ L+S TKD+V A +RL + + A+EA I+ IYP FY KA N
Sbjct: 38 YKVLIATLISLRTKDEVTLIASERLFRLAKDPYAMVSLAEEA-IQKAIYPAGFYKTKAKN 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ I++I +++Y+ ++P + ELL LPG+G K AN+ + LG + + ICVD HVH+I NR
Sbjct: 97 IRLISEILISRYNANVPDTQAELLTLPGVGIKTANLTLNLG-YQIDAICVDCHVHQIANR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV +T +PEQT +ALQ +P+ W+ +N LLV +GQ ICTP+ P C C
Sbjct: 156 LGWV-------ETKTPEQTEQALQLVMPRRFWIPLNELLVRYGQLICTPVSPFCSKCPEV 208
Query: 206 EYCP 209
E CP
Sbjct: 209 ERCP 212
>gi|401827350|ref|XP_003887767.1| endonuclease III [Encephalitozoon hellem ATCC 50504]
gi|392998774|gb|AFM98786.1| endonuclease III [Encephalitozoon hellem ATCC 50504]
Length = 238
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 123/222 (55%), Gaps = 24/222 (10%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL------------- 50
+ PV ++G S +ERRF +L+S LLSS TKD+V A +RL
Sbjct: 27 VSPVDTMGCFIAPSCHTEEERRFRILVSLLLSSQTKDEVTHEATERLRRFLPENTAADGD 86
Query: 51 LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLA 110
NGL I+ + E I + I V F+ RKA N+KKIA+I K +P ++++L +
Sbjct: 87 THNGLTIENVINSSAEH-INECIKRVGFHNRKAENLKKIAEILKKK---GLPENMEDLTS 142
Query: 111 LPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQR 170
LPG+G KMA + M V GI VDTHVHRI NR+G V KT E TR+ L++
Sbjct: 143 LPGVGNKMAILYMNHACNKVVGISVDTHVHRISNRIGLV-------KTKDVESTRKELEK 195
Query: 171 WLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAF 212
+PK EW IN LVG+GQTIC RPRC C + CPS+
Sbjct: 196 IVPKREWGSINRTLVGYGQTICVAKRPRCKECCIRGECPSSL 237
>gi|330933705|ref|XP_003304261.1| hypothetical protein PTT_16793 [Pyrenophora teres f. teres 0-1]
gi|311319189|gb|EFQ87616.1| hypothetical protein PTT_16793 [Pyrenophora teres f. teres 0-1]
Length = 391
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 124/213 (58%), Gaps = 12/213 (5%)
Query: 2 KTLEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHTA 58
+ + PV ++G + D P+++RF L++ +LSS TKD V ++ + + G
Sbjct: 119 ENVAPVDTMGCESLADRQRTPRDQRFQTLIALMLSSQTKDTVLAPVMRNMQEKMPGGFNL 178
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E++ + + I V F+ K +K+ A+I K++ DIP +++ L++LPG+GPKM
Sbjct: 179 ESVLALEPPALNAFINKVGFHNLKTKYIKQTAEILRDKWNSDIPDNIEGLISLPGVGPKM 238
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
+ ++ W +GI VD HVHRI N W KT +PEQTR AL+ WLPKE+W
Sbjct: 239 GYLCLSAAWGRTEGIGVDVHVHRIVNLWKW-------HKTQTPEQTRAALESWLPKEKWH 291
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSE--YCP 209
IN LLVGFGQTIC P+ +CG C +++ CP
Sbjct: 292 GINNLLVGFGQTICLPVGRKCGNCKLADRGLCP 324
>gi|260947100|ref|XP_002617847.1| hypothetical protein CLUG_01306 [Clavispora lusitaniae ATCC 42720]
gi|238847719|gb|EEQ37183.1| hypothetical protein CLUG_01306 [Clavispora lusitaniae ATCC 42720]
Length = 384
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 123/208 (59%), Gaps = 17/208 (8%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA--------EAIDKADEATIKDL 72
P+ RF +L+S +LSS TKD+V A++ L N + EAI K+ EA I
Sbjct: 150 PRAYRFRLLVSLMLSSQTKDEVTYVAVENL--NNFYKTKGFDGLCIEAILKSTEAEIDFC 207
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V F+ RKA +KK +++ K++ DIP ++ + ++LPG+GPKM ++++ GW G
Sbjct: 208 IQKVGFHRRKAVYIKKASELLNEKFNADIPKNIKDTISLPGVGPKMGHLLLQAGWRINSG 267
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VD H+HR+ GWV K+ PE TR AL+ WLPK+ W INPLLVGFGQT+C
Sbjct: 268 IGVDVHLHRLAQMWGWVP------KSDKPESTRLALEDWLPKKYWSDINPLLVGFGQTVC 321
Query: 193 TPLRPRCGMCTVSE-YCPSAFKESSTSS 219
P C +CT++ C A K+ S ++
Sbjct: 322 VPNAGNCDVCTLAAGLCSKANKKLSNAA 349
>gi|391871378|gb|EIT80538.1| endonuclease III [Aspergillus oryzae 3.042]
Length = 347
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 128/240 (53%), Gaps = 40/240 (16%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL---LQNG----LHTAEAIDKADEATIK--- 70
P++RRF L++ +LSS TKD V A+QRL L +G + T+ ++ DE T K
Sbjct: 103 PRDRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEK 162
Query: 71 ---------------------DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELL 109
+LI V F+ K +K A I +Y DIPS+ +EL+
Sbjct: 163 PLRDSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELM 222
Query: 110 ALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQ 169
LPG+GPKMA + M+ W +GI VD HVHRI N GW KT +PE TR+AL+
Sbjct: 223 KLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGW-------NKTKTPEDTRKALE 275
Query: 170 RWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFKESSTSSSKSKKSES 227
WLPK++W IN LLVG GQT+C P+ +CG C + ++ C S + +S K ES
Sbjct: 276 SWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDCDLAGTKLCKSEIRGLVSSRKVDAKEES 335
>gi|358375279|dbj|GAA91863.1| DNA repair protein [Aspergillus kawachii IFO 4308]
Length = 424
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 115/211 (54%), Gaps = 33/211 (15%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL-LQNGLHTAEAIDKADEA-------TIKD- 71
P++RRF L++ +LSS TKD V A+QRL + G + + K E +KD
Sbjct: 188 PRDRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDQSTSIVKKEPEEYDWKPTDQVKDS 247
Query: 72 -----------------LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGI 114
LI V F+ K +K A I +YD DIPS+ EL+ LPG+
Sbjct: 248 TLNLENILAVTPERLNELIAKVGFHNNKTKYIKAAAIILRDQYDSDIPSTATELMKLPGV 307
Query: 115 GPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
GPKMA + M+ W +GI VD HVHRI N GW KT +PE+TR AL+ WLPK
Sbjct: 308 GPKMAFLCMSAAWGKHEGIGVDVHVHRITNLWGW-------HKTKNPEETRMALESWLPK 360
Query: 175 EEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 361 DKWHEINKLLVGLGQTVCLPVARRCGECDLA 391
>gi|408397046|gb|EKJ76197.1| hypothetical protein FPSE_03672 [Fusarium pseudograminearum CS3096]
Length = 400
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 124/223 (55%), Gaps = 20/223 (8%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA----------IDKAD 65
D PK++RF L++ +LSS TKD V + + R LQ L E + D
Sbjct: 157 DEKASPKDQRFHTLVALMLSSQTKDTV-NAVVMRKLQTELPPFEPGAPPGLNLNNVLAID 215
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
T+ + I+ V F+ K +K+ A+I ++DGDIP +++ L++LPG+GPKM + +++
Sbjct: 216 PKTLNEFIWAVGFHNNKTKYIKQTAEILRDQWDGDIPDTIEGLVSLPGVGPKMGYLCLSV 275
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +GI VD HVHRI N GW KT +PE+TR LQ WLP++ W IN LLV
Sbjct: 276 AWGKHEGIGVDVHVHRITNLWGW-------HKTKNPEETRTTLQSWLPQDRWHEINHLLV 328
Query: 186 GFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSKKSE 226
G GQ++C P+ +CG C + C +A + ++ K K E
Sbjct: 329 GLGQSVCLPVGRKCGECDLGLQGLCKAADRAKVSAGRKLKTEE 371
>gi|320588628|gb|EFX01096.1| DNA repair protein [Grosmannia clavigera kw1407]
Length = 461
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 123/207 (59%), Gaps = 17/207 (8%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATIKD 71
++RRF L++ +LSS TKD V A+ RL GL+ E + + A +
Sbjct: 213 RDRRFHTLVALMLSSQTKDTVNAVAMARLQAELPAHRPGAPAGLNL-ENMLAVEPAELNR 271
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWFN 129
LI+ V F+ K +K+ A+ ++DGDIP + D L+ALPG+GPKMA + ++ GW
Sbjct: 272 LIWQVGFHNNKTRYLKQAAEQLRDRWDGDIPPTADGLMALPGVGPKMAYLCLSAEHGWNR 331
Query: 130 VQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
V+GI VD HVHRI N GW +PG+ +PE TR ALQ WLP++ W +N LLVGFGQ
Sbjct: 332 VEGIGVDVHVHRITNLWGW-QRPGSPA-AKTPESTRLALQSWLPRDRWKELNWLLVGFGQ 389
Query: 190 TICTPLRPRCGMCTVS--EYCPSAFKE 214
+C P +CG+CTV CP+A ++
Sbjct: 390 KVCLPQGAKCGVCTVGLRGLCPAADRK 416
>gi|322710098|gb|EFZ01673.1| putative DNA repair protein NTG1 [Metarhizium anisopliae ARSEF 23]
Length = 399
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 113/197 (57%), Gaps = 18/197 (9%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKAD 65
D S PK++RF L++ +LSS TKD V A++RL GL+ + D
Sbjct: 154 DRSASPKDQRFHTLIALMLSSQTKDTVNAVAMKRLQTELPPHKPGAPPGLNLDNVL-AVD 212
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
+ LI+ V F+ K +K+ A I ++ GDIP ++ L +LPG+GPKMA++ ++
Sbjct: 213 ANLLNQLIWAVGFHNNKTKYIKQAAVILRDQWKGDIPDTIQGLTSLPGVGPKMAHLCLSA 272
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +GI VD HVHRI N GW KT +PE TR ALQ WLP+++W IN LLV
Sbjct: 273 AWDRTEGIGVDVHVHRITNLWGW-------NKTKNPEDTRRALQSWLPRDKWREINWLLV 325
Query: 186 GFGQTICTPLRPRCGMC 202
GFGQ +C P+ +CG C
Sbjct: 326 GFGQAVCLPVGRKCGDC 342
>gi|134046103|ref|YP_001097589.1| hypothetical protein MmarC5_1071 [Methanococcus maripaludis C5]
gi|132663728|gb|ABO35374.1| protein of unknown function DUF123 [Methanococcus maripaludis C5]
Length = 356
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 12/200 (6%)
Query: 12 VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKD 71
VD+ + ER F +L+S ++S+ TKD+ + L + + T + + + ++
Sbjct: 25 VDKISKNSDENERAFKILVSTVISARTKDETTAKVSKELFKK-VKTPKELSEISLDNLEK 83
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
L++P FY KA N+KK+ KI L +YD IP+S++EL+ LPG+G K AN+VMTL F+
Sbjct: 84 LVHPAGFYKTKAKNLKKLGKILLEEYDSKIPNSIEELITLPGVGRKTANLVMTLA-FDEY 142
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
ICVDTHVHRI NR +V T PE T L++ LPK+ W RIN LLV FGQ I
Sbjct: 143 AICVDTHVHRITNRWNYVD-------TEFPENTEMELRKKLPKDYWKRINNLLVVFGQEI 195
Query: 192 CTPLRPRCGMC--TVSEYCP 209
C+P+ P+C C + + CP
Sbjct: 196 CSPI-PKCDKCFSEIRKICP 214
>gi|384208101|ref|YP_005593821.1| endonuclease III [Brachyspira intermedia PWS/A]
gi|343385751|gb|AEM21241.1| endonuclease III [Brachyspira intermedia PWS/A]
Length = 233
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS TKD A RL + + + + K E I LIYPV FY KA N
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDML-KLSEEEIAKLIYPVGFYKVKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++++ + ++G +P +DELL L G+G K+AN+V+T F+ GICVDTHVHRI NR
Sbjct: 96 ILEVSQMIIDDFNGQVPDEIDELLKLKGVGRKVANLVVTEA-FDKDGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PE+T AL+ LPKE W N LV +GQ +C P+ P C CTVS
Sbjct: 155 FGYV-------HTKTPEETEFALRDKLPKEYWRVYNDTLVVYGQNLCKPISPLCSKCTVS 207
Query: 206 EYC 208
+YC
Sbjct: 208 QYC 210
>gi|238878754|gb|EEQ42392.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 320
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 115/192 (59%), Gaps = 13/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA-------EAIDKADEATIKDLI 73
PK RF +L+S +LSS TKD+V A++ L NGL E++ K E+ I I
Sbjct: 95 PKIYRFQLLISLMLSSQTKDEVNYEAMKNL-HNGLLKVHPDGLCIESVLKLSESEIDAYI 153
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V F+ RKA ++K I + + GDIP +++E++ALPG+GPKM +++ GW GI
Sbjct: 154 KKVGFHNRKAQYIRKTCSILMENHGGDIPKTIEEIVALPGVGPKMGFLLLQSGWGINAGI 213
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD H+HR+ GWV+ K ++PE+ R LQ WLPK+ W INPL+VGFGQ IC
Sbjct: 214 GVDVHLHRLALMWGWVS-----PKANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICV 268
Query: 194 PLRPRCGMCTVS 205
P C +CT++
Sbjct: 269 PRAANCDICTLA 280
>gi|302914726|ref|XP_003051196.1| hypothetical protein NECHADRAFT_41785 [Nectria haematococca mpVI
77-13-4]
gi|256732134|gb|EEU45483.1| hypothetical protein NECHADRAFT_41785 [Nectria haematococca mpVI
77-13-4]
Length = 439
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/201 (41%), Positives = 119/201 (59%), Gaps = 22/201 (10%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKAD 65
D S PK++RF L++ +LSS TKD V ++RL GL+ E I +
Sbjct: 172 DRSASPKDQRFHTLVALMLSSQTKDTVNAVVMKRLQTELPSYKQGAPVGLNL-ENILAVE 230
Query: 66 EATIKDLIYPVAFY---TRKAC-NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+ + I+ V F+ T+ AC +K+ A+I K++GDIP +++ L +LPG+GPKMA +
Sbjct: 231 PKLLNEFIWQVGFHNNKTKSACPYIKQAAEIIRDKWNGDIPDTIEGLTSLPGVGPKMAYL 290
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
M++ W +GI VD HVHRI N GW KT +PE+TR ALQ WLPK+ W IN
Sbjct: 291 CMSVAWGRTEGIGVDVHVHRITNLWGW-------NKTKNPEETRAALQSWLPKDRWHEIN 343
Query: 182 PLLVGFGQTICTPLRPRCGMC 202
LLVG GQ++C P+ +CG C
Sbjct: 344 HLLVGLGQSVCLPVGRKCGEC 364
>gi|159904747|ref|YP_001548409.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
gi|159886240|gb|ABX01177.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C6]
Length = 356
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 12/200 (6%)
Query: 12 VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKD 71
VD+ + ER F +L+S ++S+ TKD+ + L + + + + + + ++
Sbjct: 25 VDKISKNSNENERAFKILVSTVISARTKDETTAKVSKELFK-KVKSPKDLSEISVEELEK 83
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
L++P FY KA N+KK+ +I L KYD IP+S++EL+ LPG+G K AN+VMTL F+
Sbjct: 84 LVHPAGFYKTKAKNLKKLGEILLEKYDSKIPNSIEELIKLPGVGRKTANLVMTLA-FDEY 142
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
ICVDTHVHRI NR +V T PE T L++ LPK+ W RIN LLV FGQ I
Sbjct: 143 AICVDTHVHRITNRWNYVD-------TEFPENTEMELRKKLPKDYWKRINNLLVVFGQEI 195
Query: 192 CTPLRPRCGMC--TVSEYCP 209
C+P+ P+C C + E CP
Sbjct: 196 CSPI-PKCDKCFSEIREICP 214
>gi|70934485|ref|XP_738462.1| endonuclease III [Plasmodium chabaudi chabaudi]
gi|56514702|emb|CAH82012.1| endonuclease iii homologue, putative [Plasmodium chabaudi chabaudi]
Length = 272
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
RF L+S LLSS TKD+V + RL ++GL T E I E +K LIY + FY K+
Sbjct: 77 RFQTLISCLLSSRTKDEVTAMVMDRLKKHGL-TVENILNTPEEELKKLIYGIGFYNVKSK 135
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+ +I KI KY+ DIP S +EL+ LPGIG K++ +++ +GI VD HVHRI N
Sbjct: 136 QIIQICKILKEKYNSDIPHSYEELMKLPGIGEKVSQLILQTALNKHEGIAVDIHVHRISN 195
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RL WV T + T+ L+ ++ KE W +N LLVGFGQ IC +P C CT+
Sbjct: 196 RLNWVY-------TKNESDTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCEKCTI 248
Query: 205 SEYC 208
++YC
Sbjct: 249 TDYC 252
>gi|326477245|gb|EGE01255.1| DNA repair protein Ntg1 [Trichophyton equinum CBS 127.97]
Length = 421
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 129/246 (52%), Gaps = 42/246 (17%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT------- 57
PV ++G E S P++RRF L++ +LSS TKD V + RL HT
Sbjct: 115 PVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLRL-----HTQLTDETS 169
Query: 58 ----AEAIDKADEAT----------------IKDLIYPVAFYTRKACNMKKIAKICLTKY 97
AE D+ + T + +LI V F+ K +K A+I K+
Sbjct: 170 DNPVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNNKTRYIKATAEILRDKF 229
Query: 98 DGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQK 157
D DIPS+++ L++LPG+GPKMA + M+ W +GI VD HVHRI N GW K
Sbjct: 230 DSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHRITNLWGW-------NK 282
Query: 158 TSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKES 215
T +PE TR AL+ WLP+++W IN LLVG GQT+C P+ RC C +S C + K
Sbjct: 283 TKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTGLCIAEIKGK 342
Query: 216 STSSSK 221
S ++ K
Sbjct: 343 SRATKK 348
>gi|326471890|gb|EGD95899.1| DNA repair protein Ntg1 [Trichophyton tonsurans CBS 112818]
Length = 421
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/246 (37%), Positives = 129/246 (52%), Gaps = 42/246 (17%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT------- 57
PV ++G E S P++RRF L++ +LSS TKD V + RL HT
Sbjct: 115 PVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLRL-----HTQLTDETS 169
Query: 58 ----AEAIDKADEAT----------------IKDLIYPVAFYTRKACNMKKIAKICLTKY 97
AE D+ + T + +LI V F+ K +K A+I K+
Sbjct: 170 DNPVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNNKTRYIKATAEILRDKF 229
Query: 98 DGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQK 157
D DIPS+++ L++LPG+GPKMA + M+ W +GI VD HVHRI N GW K
Sbjct: 230 DSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHRITNLWGW-------NK 282
Query: 158 TSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKES 215
T +PE TR AL+ WLP+++W IN LLVG GQT+C P+ RC C +S C + K
Sbjct: 283 TKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTGLCIAEIKGK 342
Query: 216 STSSSK 221
S ++ K
Sbjct: 343 SRATKK 348
>gi|425781088|gb|EKV19070.1| DNA repair protein Ntg1, putative [Penicillium digitatum PHI26]
gi|425783221|gb|EKV21080.1| DNA repair protein Ntg1, putative [Penicillium digitatum Pd1]
Length = 419
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/236 (39%), Positives = 126/236 (53%), Gaps = 43/236 (18%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT--AEAIDKADEATIK-------- 70
P +RRF L++ +LSS TKD V A+QRL HT +A A + TIK
Sbjct: 183 PIDRRFQTLIALMLSSQTKDTVTAVAMQRL-----HTELGDATPPAQDITIKQEDDDSNP 237
Query: 71 -------------------DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL 111
+LI V F+ K +K A I +++GDIPS+ + L+AL
Sbjct: 238 TDSTLNLSNILAVDPTRLNELIRTVGFHNNKTKYIKAAALILRDQHNGDIPSTPEGLMAL 297
Query: 112 PGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRW 171
PG+GPKMA + ++ W GI VD HVHRI N GW KT +PE+TR+ALQ W
Sbjct: 298 PGVGPKMAYLCLSAAWGKHLGIGVDVHVHRITNLWGW-------NKTKTPEETRKALQSW 350
Query: 172 LPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSKKS 225
LP E+W IN LLVG GQT+C P++ RCG C ++ + C S + + K KKS
Sbjct: 351 LPVEKWHEINKLLVGLGQTVCLPVKRRCGDCDLAGLQLCKSEIRGLEPTMLKVKKS 406
>gi|321260781|ref|XP_003195110.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus gattii
WM276]
gi|317461583|gb|ADV23323.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
gattii WM276]
Length = 452
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 128/226 (56%), Gaps = 16/226 (7%)
Query: 6 PVYSLGVDE--TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAEA 60
PV +G + T++ PK RF +L+S +LSS TKD V A+ L L GL TA +
Sbjct: 138 PVDEMGCERPRTNAEGDPKTFRFHILISLMLSSQTKDAVTSAAVTSLHTSLPGGL-TAAS 196
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKY---DGDIPSSLDELLALPGIGPK 117
+ A TI++ I V F+ RKA +++ AK L + GD+P +++ L L G+GPK
Sbjct: 197 LATAPLETIQECINKVGFWRRKAEYIQEAAKSLLEQEGDEKGDVPKTVEGLCKLKGVGPK 256
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
MA + + W GI VD HVHRI NRL W P TS+PEQTR LQ WLP
Sbjct: 257 MAFLALQCAWDINAGIGVDVHVHRITNRLKWHRPP-----TSTPEQTRLNLQSWLPPHLH 311
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSK 221
INPL+VGFGQ IC P+ PRC +C + E CPS K +++ K
Sbjct: 312 KPINPLMVGFGQVICLPVGPRCDICLLGQKEICPSRVKGANSKGRK 357
>gi|302506539|ref|XP_003015226.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
gi|291178798|gb|EFE34586.1| hypothetical protein ARB_06349 [Arthroderma benhamiae CBS 112371]
Length = 1131
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 129/246 (52%), Gaps = 42/246 (17%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT------- 57
PV ++G E S P++RRF L++ +LSS TKD V + RL HT
Sbjct: 115 PVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLRL-----HTQLTDETS 169
Query: 58 ----AEAIDKADEAT----------------IKDLIYPVAFYTRKACNMKKIAKICLTKY 97
AE D+ + T + +LI V F+ K +K A+I ++
Sbjct: 170 NNAVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNNKTRYIKATAEILRDQF 229
Query: 98 DGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQK 157
D DIPS+++ L++LPG+GPKMA + M+ W +GI VD HVHRI N GW K
Sbjct: 230 DSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHRITNLWGW-------NK 282
Query: 158 TSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKES 215
T +PE TR AL+ WLP+++W IN LLVG GQT+C P+ RC C +S C + K
Sbjct: 283 TKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTGLCIAEIKSK 342
Query: 216 STSSSK 221
S ++ K
Sbjct: 343 SRAAKK 348
>gi|358395681|gb|EHK45068.1| hypothetical protein TRIATDRAFT_308617 [Trichoderma atroviride IMI
206040]
Length = 422
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 113/197 (57%), Gaps = 18/197 (9%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKAD 65
D S P+++R L++ +LSS TKD V ++RL GL+ + D
Sbjct: 157 DRSASPRDQRLHSLIALMLSSQTKDTVTAVVMRRLQTELPAYKPGAPVGLNLDNVL-AVD 215
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E + +I+ V F+ K +K+ A+I +++GDIP S+ L +LPG+GPKMA + +++
Sbjct: 216 ENLLNQMIWAVGFHNNKTKYIKRTAEILRDEWNGDIPDSIQGLTSLPGVGPKMAYLCLSV 275
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +GI VD HVHRI N GW KT +PE+TR ALQ WLP + W IN LLV
Sbjct: 276 AWNRTEGIGVDVHVHRITNMWGW-------NKTKNPEETRLALQSWLPHDRWREINSLLV 328
Query: 186 GFGQTICTPLRPRCGMC 202
G GQ++C P+ RCG C
Sbjct: 329 GLGQSVCLPVGRRCGDC 345
>gi|284161459|ref|YP_003400082.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus profundus
DSM 5631]
gi|284011456|gb|ADB57409.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus profundus
DSM 5631]
Length = 211
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 20/203 (9%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
PVY + +++ F VL+SA+LS+ TKD+ A+++L + + E + K
Sbjct: 20 PVYEMNLNDP----------FMVLVSAILSTRTKDEQTHKAVRKLF-SVVKKPEDLLKLS 68
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E I +LI PV F+ KA N+KK+A++ + Y G +P +L+ELL LPG+G K+AN+V L
Sbjct: 69 EDDIDELIKPVGFHRTKAKNLKKLAEVLVNNYGGKVPDNLEELLKLPGVGRKVANIV--L 126
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
I VDTHVHRI NRLG V +T PE+T + L++ +PK+ W R+N V
Sbjct: 127 AHLGKPAIAVDTHVHRIANRLGVV-------RTKRPEETEKELKKIVPKDLWSRLNKAFV 179
Query: 186 GFGQTICTPLRPRCGMCTVSEYC 208
GFGQT+C PL+P C C +C
Sbjct: 180 GFGQTVCKPLKPLCEECPFKSFC 202
>gi|225620166|ref|YP_002721423.1| endonuclease III [Brachyspira hyodysenteriae WA1]
gi|225214985|gb|ACN83719.1| endonuclease III [Brachyspira hyodysenteriae WA1]
Length = 233
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS TKD A RL + + + + K E I LIYPV FY KA N
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGNPKDML-KLSEEEIAKLIYPVGFYKVKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++++ + + G +P +DELL L G+G K+AN+V+T F+ GICVDTHVHRI NR
Sbjct: 96 ILEVSQMIIDDFKGQVPDEIDELLKLKGVGRKVANLVVTEA-FDKDGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PE+T AL+ LPKE W N LV +GQ +C P+ P C CTVS
Sbjct: 155 FGYVN-------TKTPEETEFALRDKLPKEYWRVYNDTLVVYGQNLCKPISPLCSKCTVS 207
Query: 206 EYC 208
+YC
Sbjct: 208 QYC 210
>gi|82596217|ref|XP_726170.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481466|gb|EAA17735.1| Drosophila melanogaster CG9272 gene product [Plasmodium yoelii
yoelii]
Length = 386
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K RF L+S LLSS TKD+V + RL ++GL+ E I K E +K LIY + FY
Sbjct: 188 KNFRFQTLISCLLSSRTKDEVTAMVMGRLKKHGLN-VENILKTSEEELKKLIYGIGFYNV 246
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
K+ + KI +I KY+ DIP + +EL+ LPGIG K++ +++ +GI VD HVHR
Sbjct: 247 KSKQIIKICQILKEKYNSDIPHNYEELIKLPGIGEKVSQLILQTALNKHEGIAVDIHVHR 306
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I NRL WV T + T+ L+ ++ KE W +N LLVGFGQ IC +P C
Sbjct: 307 ISNRLNWVY-------TKNEADTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCEK 359
Query: 202 CTVSEYC 208
CT+++YC
Sbjct: 360 CTLTDYC 366
>gi|302652772|ref|XP_003018229.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
gi|291181848|gb|EFE37584.1| hypothetical protein TRV_07762 [Trichophyton verrucosum HKI 0517]
Length = 1112
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 128/246 (52%), Gaps = 42/246 (17%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT------- 57
PV ++G E S P++RRF L++ +LSS TKD V + RL HT
Sbjct: 142 PVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLRL-----HTQLTDETS 196
Query: 58 ----AEAIDKADEAT----------------IKDLIYPVAFYTRKACNMKKIAKICLTKY 97
AE D+ + T + +LI V F+ K +K A+I ++
Sbjct: 197 DNAVAEVWDRDHQKTASTLTLENMLAVSPERLNELIRAVGFHNNKTRYIKATAEILRDQF 256
Query: 98 DGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQK 157
D DIPS+++ L++LPG+GPKMA + M+ W +GI VD HVHRI N GW K
Sbjct: 257 DSDIPSTVEGLISLPGVGPKMAYLCMSSAWSKHEGIGVDVHVHRITNLWGW-------NK 309
Query: 158 TSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKES 215
T +PE TR AL+ WLP+++W IN LLVG GQT+C P+ RC C +S C + K
Sbjct: 310 TKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLSGTGLCIAEIKSK 369
Query: 216 STSSSK 221
S + K
Sbjct: 370 SRGTKK 375
>gi|406879151|gb|EKD27842.1| hypothetical protein ACD_79C00539G0001, partial [uncultured
bacterium]
Length = 212
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 113/184 (61%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS+ TKD+V + L +HT E + K A I LIYPV FY KA +
Sbjct: 36 FRILVSTMLSARTKDEVTLKSSNNLFTR-IHTPEELIKLKTADIARLIYPVGFYKTKARH 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++A + + K++ +PS++D+LL +PG+G K AN+V++ F++ ICVDTHV RICNR
Sbjct: 95 LKQLAAVLINKFNSLVPSNIDDLLMIPGVGRKTANLVLSRA-FDIPAICVDTHVFRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +S PE+T + L + +P+ W IN +LV FGQ +C P+ P C C VS
Sbjct: 154 LEVTV-------SSKPEETEKQLMKKIPENYWQDINTILVAFGQMVCKPVSPHCKECKVS 206
Query: 206 EYCP 209
CP
Sbjct: 207 RLCP 210
>gi|50287173|ref|XP_446016.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525323|emb|CAG58940.1| unnamed protein product [Candida glabrata]
Length = 392
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 12/196 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIKDL 72
PK RF +L++ +LSS TKD++ A+ +++ N LH T E++ DE+ I +
Sbjct: 146 PKNYRFQLLIAVMLSSQTKDEITAEAMLNIMRYCLNELHDPNGMTLESVLMMDESIIDEK 205
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V F+ RKA + K ++ +D D+P++++++L+LPG+GPKM + + W + G
Sbjct: 206 IKSVGFHRRKATYIYKSVRMLRDNFDSDVPTNVNDMLSLPGVGPKMTYLALQRAWGKMDG 265
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
ICVD HV R+C WV +K +P+ TR+ALQ WLPK W IN +LVGFGQ IC
Sbjct: 266 ICVDVHVDRLCKMWRWVDA----KKCKTPDHTRKALQTWLPKCLWYEINTVLVGFGQVIC 321
Query: 193 TPLRPRCGMCTVSEYC 208
RC +C ++ C
Sbjct: 322 MARGKRCDICLANDIC 337
>gi|385303995|gb|EIF48033.1| endonuclease iii [Dekkera bruxellensis AWRI1499]
Length = 260
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 136/250 (54%), Gaps = 19/250 (7%)
Query: 2 KTLEPVYSLGVDETDSSLPPKER----RFAVLLSALLSSLTKDKVADGALQRL------- 50
K PV +G D +++ + RF VL+S +LS+ TKD+V +++L
Sbjct: 4 KVKAPVDKIGCDHISTAVSGLKEGPVWRFQVLISLMLSAQTKDEVNYQXMKKLQDYFISH 63
Query: 51 -LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELL 109
+NGL + EAI DZA + +LIY V F+ RKA +K+ A++ KYDG+IP + +++
Sbjct: 64 GYKNGL-SMEAILDTDZAKLDELIYKVGFHXRKANFIKRTAEMLKEKYDGEIPKDVKKIM 122
Query: 110 ALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQ 169
PG+GPKM + + + W GI VDTH+ R+ WV P + PE R+ +
Sbjct: 123 EFPGVGPKMGYLFLQIAWGICSGIGVDTHMARMAGWYHWV--PKWQXGKPEPEYVRKCFE 180
Query: 170 RWLP--KEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE--YCPSAFKESSTSSSKSKKS 225
+ L KEEW INP LVGFGQTIC P PRC +CT+S CP+ K +++S
Sbjct: 181 KMLADHKEEWSVINPTLVGFGQTICLPXAPRCDICTISRTGLCPAVDKALLRRVEINRRS 240
Query: 226 ESSSLRKLER 235
S +K R
Sbjct: 241 GVKSPQKKSR 250
>gi|158522177|ref|YP_001530047.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfococcus oleovorans
Hxd3]
gi|158511003|gb|ABW67970.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfococcus oleovorans
Hxd3]
Length = 220
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L S LLS TKD V D A + L +T E I I+ LIYPV FY KA
Sbjct: 38 FEILASTLLSLRTKDAVTDAAAR-RLLAVANTPEQIAALPAQKIEKLIYPVGFYPTKAKR 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I++I L ++DG +P ++ LLALPG+G K AN+V+ G F GICVDTHVHRI NR
Sbjct: 97 LIEISRILLERHDGRVPDEMEALLALPGVGRKTANLVLIEG-FGRDGICVDTHVHRISNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G VT T +PE+T AL++ LPK+ W N LLV +GQTIC P+ P C C V
Sbjct: 156 TGIVT-------TRTPEETEFALRKTLPKKYWKPYNELLVSYGQTICVPVSPFCSRCPVE 208
Query: 206 EYCP 209
CP
Sbjct: 209 AECP 212
>gi|336262434|ref|XP_003346001.1| base-excision repair protein [Sordaria macrospora k-hell]
gi|380089594|emb|CCC12476.1| putative nuclear and mitochondrial base-excision repair protein
[Sordaria macrospora k-hell]
Length = 805
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 119/194 (61%), Gaps = 20/194 (10%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATI-K 70
++RRF L++ +LSS TKD V A+ RL + GL+ + A E T+
Sbjct: 207 RDRRFHTLVALMLSSQTKDTVNAEAMLRLKKELPPHTEGAEPGLNLENML--AVEPTLLN 264
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWF 128
+LI V F+ K +K+ A+I +Y+ DIP +++ L++LPG+GPKMA++ M+ GW
Sbjct: 265 ELIGKVGFHNNKTKYLKQAAEILRDRYNSDIPDTIEGLMSLPGVGPKMAHLCMSAENGWN 324
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
V+GI VD HVHRI N GW P T +PE+TR ALQ WLP+++W IN LLVGFG
Sbjct: 325 RVEGIGVDVHVHRITNLWGWQNPP-----TKTPEETRLALQSWLPRDKWKEINWLLVGFG 379
Query: 189 QTICTPLRPRCGMC 202
Q++C P+ +CG C
Sbjct: 380 QSVCLPVGRKCGDC 393
>gi|68067789|ref|XP_675828.1| endonuclease III [Plasmodium berghei strain ANKA]
gi|56495233|emb|CAH95547.1| endonuclease iii homologue, putative [Plasmodium berghei]
Length = 246
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 111/187 (59%), Gaps = 8/187 (4%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K RF L+S LLSS TKD+V + RL ++GL E I K E +K LI+ V FY
Sbjct: 50 KNFRFQTLISCLLSSRTKDEVTAMVMDRLKKHGL-NVENILKTPEEELKKLIFGVGFYNV 108
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
K+ + KI +I KY+ DIP + +EL+ LPGIG K++ +++ +GI VD HVHR
Sbjct: 109 KSKQIIKICQILKEKYNSDIPHNYEELIKLPGIGEKVSQLILQTALNKHEGIAVDIHVHR 168
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I NRL WV T + T+ L+ ++ KE W +N LLVGFGQ IC +P CG
Sbjct: 169 ISNRLNWVY-------TKNELDTQIKLKSFVDKELWSELNHLLVGFGQVICKGKKPLCGK 221
Query: 202 CTVSEYC 208
CT+++YC
Sbjct: 222 CTLTDYC 228
>gi|374815134|ref|ZP_09718871.1| endonuclease III protein [Treponema primitia ZAS-1]
Length = 231
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 115/183 (62%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+AVL S +LS TKD+V Q LL+ T +A+ K I+ LIYPV FY KA N
Sbjct: 49 WAVLASTILSLRTKDEVTLVRSQALLKKA-PTPKALLKLTTEEIEKLIYPVGFYHTKAQN 107
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ IA I + Y G +P+ +D LLALPG+G K AN+V+T F++ GICVD HVHRI NR
Sbjct: 108 LQNIASIIIETYRGQVPADMDLLLALPGVGRKTANLVLTEA-FDMDGICVDVHVHRITNR 166
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + ++ +PE+T L++ LP++ W RIN LLV +GQ +C P+ P C C ++
Sbjct: 167 LGAL-------QSKTPEETEMILRKILPRKYWKRINKLLVLYGQRVCRPISPFCSRCVIT 219
Query: 206 EYC 208
+ C
Sbjct: 220 DRC 222
>gi|389628416|ref|XP_003711861.1| DNA repair protein Ntg1 [Magnaporthe oryzae 70-15]
gi|351644193|gb|EHA52054.1| DNA repair protein Ntg1 [Magnaporthe oryzae 70-15]
gi|440470899|gb|ELQ39938.1| DNA base excision repair N-glycosylase 1 [Magnaporthe oryzae Y34]
gi|440486070|gb|ELQ65970.1| DNA base excision repair N-glycosylase 1 [Magnaporthe oryzae P131]
Length = 449
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 116/194 (59%), Gaps = 20/194 (10%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATIK 70
P++RRF L++ +LSS TKD V A+ RL + GL+ E + + A +
Sbjct: 171 PRDRRFHTLVALMLSSQTKDTVNAVAMARLKKELPPFEEGAPPGLNL-ENVLAVEPALLN 229
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWF 128
+LI+ V F+ K +K+ A I KY+ DIP ++ L +LPG+GPKMA++ M+ GW
Sbjct: 230 ELIWQVGFHNNKTKYIKQAAVILRDKYNSDIPDTIAGLTSLPGVGPKMAHLCMSAPNGWN 289
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
V+GI VD HVHRI N GW KT++PE TR AL+ WLP++ W IN LLVG G
Sbjct: 290 RVEGIGVDVHVHRITNLWGW-------NKTNNPEATRAALESWLPRDRWREINWLLVGLG 342
Query: 189 QTICTPLRPRCGMC 202
QT+C P+ +CG C
Sbjct: 343 QTVCLPVGRKCGDC 356
>gi|403175797|ref|XP_003334554.2| endonuclease III [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|375171758|gb|EFP90135.2| endonuclease III [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 465
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 125/201 (62%), Gaps = 14/201 (6%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGA---LQRLLQNGLHTAEAIDKADEATIKDLIYPVAF 78
++RR + L+S +LSS TKD+V A L+ L++ L T +++ A I++ I V F
Sbjct: 129 RDRRLSCLVSLMLSSQTKDEVTAQATLNLRLHLKDSL-TVDSLRNASLTEIENCINKVGF 187
Query: 79 YTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTH 138
+ +KA +K +A K++ D+P +LDEL+AL G+GPKMA + ++ W GI VDTH
Sbjct: 188 WKKKAQYIKLMADDLFLKHESDVPKTLDELVALKGVGPKMAFLALSNAWAINLGIGVDTH 247
Query: 139 VHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPR 198
VHRI NRLGW+ +TS PE TR L+ WLP++ + IN LLVGFGQ IC P+ P+
Sbjct: 248 VHRISNRLGWL-------QTSDPEATRINLESWLPRDLFQEINHLLVGFGQVICLPVGPK 300
Query: 199 CGMCTVSEY---CPSAFKESS 216
C C V + CPS+ E++
Sbjct: 301 CEDCYVGKVPGLCPSSKVEAN 321
>gi|91201723|emb|CAJ74783.1| similar to endonuclease III [Candidatus Kuenenia stuttgartiensis]
Length = 217
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 112/186 (60%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S LLS TKD+ A +RL E + K ++ LIYPV FY RKA
Sbjct: 35 FHVLISCLLSLRTKDQTTRAASERLFAIA-DNPEDMKKIPLQKLEKLIYPVGFYRRKAVT 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+++I + Y+G +P +DELL L G+G K AN+V++LG + GICVD HVHRI NR
Sbjct: 94 IQEICETLTKDYEGKVPDEIDELLKLNGVGRKTANLVVSLG-YKKPGICVDVHVHRINNR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G++ KT +P +T AL++ LP + W+ IN LLV +GQ IC P+ P+C +C V+
Sbjct: 153 WGYI-------KTKTPAETECALRKKLPAKYWLCINDLLVTYGQNICVPISPKCSLCPVN 205
Query: 206 EYCPSA 211
YC A
Sbjct: 206 SYCKKA 211
>gi|400593176|gb|EJP61171.1| HhH-GPD superfamily base excision DNA repair protein [Beauveria
bassiana ARSEF 2860]
Length = 393
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 18/194 (9%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATIKD 71
K++RF L++ +LSS TKD V ++RL GL+ + I D T+
Sbjct: 164 KDQRFHTLIALMLSSQTKDTVNAVVMKRLQTELPPYKPGAPAGLNL-DNILAVDPDTLNK 222
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
+I+ V F+ K +KK A+I +++GDIP +++ L ALPG+GPKM + ++ W +
Sbjct: 223 MIWAVGFHNNKTKYIKKAAEILRDEWNGDIPDTIEGLTALPGVGPKMGYLCLSAAWGRTE 282
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
GI VD HVHRI N GW KT +PE+TR ALQ WLP++ W IN LLVG GQ +
Sbjct: 283 GIGVDVHVHRITNMWGW-------HKTKNPEETRLALQAWLPRDRWREINGLLVGLGQAV 335
Query: 192 CTPLRPRCGMCTVS 205
C P+ RCG C V
Sbjct: 336 CVPVGQRCGSCDVG 349
>gi|343421996|emb|CCD18619.1| endonuclease III, putative, (fragment) [Trypanosoma vivax Y486]
Length = 212
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 117/194 (60%), Gaps = 7/194 (3%)
Query: 2 KTLEPVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
K PV ++G + D+ + RR+ +LL+ +LS+ TKD+V A+ L++ G T +
Sbjct: 24 KVEAPVDTVGCAKLFDTKASNEVRRYHILLALMLSAQTKDQVTADAMFSLIKYGC-TPAS 82
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I K E+ + D I V F+ KA N+K + L ++G +P S +EL+ALPG+GPKMA+
Sbjct: 83 ISKMTESKLNDFISKVGFHNTKAKNIKAATDMILKLHEGKVPQSYEELIALPGVGPKMAH 142
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+ + V GI VDTHVHRI R WV P T SPE TR+AL+ WLP+E W I
Sbjct: 143 LFLQAADGVVLGIGVDTHVHRIAQRFRWV--PAT---VKSPEDTRKALESWLPREHWGEI 197
Query: 181 NPLLVGFGQTICTP 194
N LLVG GQTIC P
Sbjct: 198 NELLVGLGQTICAP 211
>gi|338731336|ref|YP_004660728.1| endonuclease III [Thermotoga thermarum DSM 5069]
gi|335365687|gb|AEH51632.1| endonuclease III [Thermotoga thermarum DSM 5069]
Length = 208
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/183 (45%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS T+D+ A Q L + E++ KA I DLI P Y +KA
Sbjct: 27 FKILISTILSQRTRDENTLVASQNLF-SKYPNVESLAKAKPEEIYDLIKPSGMYRQKAER 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++KI L KY+G +PS LDELL LPG+G K AN+V+ G F++ I VDTHVHRI NR
Sbjct: 86 IIEVSKIILEKYNGKVPSDLDELLKLPGVGRKTANIVLFQG-FSIPAIAVDTHVHRISNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V KT +PEQT E L + LPK W IN +V FG+ IC P PRC C S
Sbjct: 145 LGFV-------KTKTPEQTEEELSKVLPKRLWGPINVAMVNFGRNICLPRNPRCEKCPFS 197
Query: 206 EYC 208
+ C
Sbjct: 198 KEC 200
>gi|212526280|ref|XP_002143297.1| DNA repair protein Ntg1, putative [Talaromyces marneffei ATCC
18224]
gi|210072695|gb|EEA26782.1| DNA repair protein Ntg1, putative [Talaromyces marneffei ATCC
18224]
Length = 418
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 125/248 (50%), Gaps = 47/248 (18%)
Query: 20 PPKERRFAVLLSALLSSLTKDKVADGALQRLL--------QNGLH--------------- 56
PPKE+RF L++ +LSS TKD V A+QRL QN +
Sbjct: 171 PPKEQRFHTLVALMLSSQTKDTVTAVAMQRLHTELGQEGEQNQTNASPSKPLIKKEEDDD 230
Query: 57 ---------------TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDI 101
T + I + +I+ V F+ K +K++A+I +YD DI
Sbjct: 231 TDGIKLGSANKDSTLTVQNILAVSPERLNQMIWSVGFHNNKTKYIKQVAEILRDQYDSDI 290
Query: 102 PSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSP 161
P++ +EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW T +P
Sbjct: 291 PTTPEELMKLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNMWGW-------HATKNP 343
Query: 162 EQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFKESSTSS 219
E+TR ALQ WLP+++W IN LLVG GQT C P+ +CG C + + C S + +
Sbjct: 344 EETRIALQSWLPRDKWHEINKLLVGLGQTACLPVGRKCGECDLAGTGLCKSEIRGMVAKT 403
Query: 220 SKSKKSES 227
K K E+
Sbjct: 404 KKEVKEEA 411
>gi|222055487|ref|YP_002537849.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter daltonii
FRC-32]
gi|221564776|gb|ACM20748.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter daltonii
FRC-32]
Length = 218
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+DK A RL T + + I+ L+YPV F+ KA
Sbjct: 36 FKVLISCILSLRTQDKTTSAASDRLFALA-DTPDKLAALPVEIIEKLVYPVGFFRVKAAQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I+++ + +Y G +P ++ELL G+G K AN+V+TLG + GICVDTHVHRICNR
Sbjct: 95 IKEISRLLMERYQGKVPDEIEELLTFKGVGRKTANLVVTLG-YGKPGICVDTHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PEQT +AL+ LP E W+ IN LLV FGQ C P+ P C C +
Sbjct: 154 WGYVV-------TRTPEQTEQALRGKLPTEYWLMINDLLVTFGQNQCYPISPICSTCPLR 206
Query: 206 EYC 208
E C
Sbjct: 207 EMC 209
>gi|150403470|ref|YP_001330764.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C7]
gi|150034500|gb|ABR66613.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus
maripaludis C7]
Length = 356
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 12 VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKD 71
VD+ + ER F +L+S ++S+ TKD+ + + L + + + + ++
Sbjct: 25 VDKISKNSNENERAFKILVSTVISARTKDETT-AKVSKALFKKVKSPKDLSDISLEELEK 83
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
L++P FY KA N+KK+ KI L +YD IP+S++EL+ LPG+G K AN+VMTL F+
Sbjct: 84 LVHPAGFYKTKAKNLKKLGKILLEEYDSKIPNSIEELVTLPGVGRKTANLVMTLA-FDDY 142
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
ICVDTHVHRI NR +V T PE T L++ LPK W RIN LLV FGQ I
Sbjct: 143 AICVDTHVHRITNRWNYVN-------TEFPEDTEMELRKKLPKNYWKRINNLLVVFGQEI 195
Query: 192 CTPLRPRCGMC--TVSEYCP 209
C+P+ P+C C + E CP
Sbjct: 196 CSPI-PKCDKCFSEIREICP 214
>gi|350633857|gb|EHA22221.1| hypothetical protein ASPNIDRAFT_50950 [Aspergillus niger ATCC 1015]
Length = 907
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 124/237 (52%), Gaps = 36/237 (15%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL-------------- 50
PV ++G E + P++RRF L++ +LSS TKD V A+QRL
Sbjct: 167 PVDTMGCAELYWRASSPRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGDQSTTIVKK 226
Query: 51 ------------LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYD 98
+++ E I + +LI V F+ K +K A I +YD
Sbjct: 227 EPEDYDWKPTDQVKDSTLNLENILAVTPERLNELIAKVGFHNNKTKYIKAAAIILRDQYD 286
Query: 99 GDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKT 158
DIPS+ EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW KT
Sbjct: 287 SDIPSTAPELMKLPGVGPKMAFLCMSAAWGKHEGIGVDVHVHRITNLWGW-------HKT 339
Query: 159 SSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFK 213
+PE+TR AL+ WLPK++W IN LLVG GQT+C P+ RCG C + ++ C S K
Sbjct: 340 KNPEETRMALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECDLAGTKLCKSEIK 396
>gi|6324530|ref|NP_014599.1| bifunctional N-glycosylase/AP lyase NTG2 [Saccharomyces cerevisiae
S288c]
gi|14285602|sp|Q08214.1|NTG2_YEAST RecName: Full=DNA base excision repair N-glycosylase 2
gi|1419843|emb|CAA99045.1| endonuclease III-like glycosylase 2 [Saccharomyces cerevisiae]
gi|151945590|gb|EDN63831.1| endonuclease III DNA base excision repair N-glycosylase
[Saccharomyces cerevisiae YJM789]
gi|285814846|tpg|DAA10739.1| TPA: bifunctional N-glycosylase/AP lyase NTG2 [Saccharomyces
cerevisiae S288c]
gi|323303033|gb|EGA56836.1| Ntg2p [Saccharomyces cerevisiae FostersB]
gi|349581125|dbj|GAA26283.1| K7_Ntg2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296288|gb|EIW07390.1| Ntg2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 380
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 119/217 (54%), Gaps = 13/217 (5%)
Query: 19 LPPKERRFAVLLSALLSSLTKD-KVADGALQ--RLLQNGLHTAEAID-----KADEATIK 70
+ PK R L+ +LS+ T+D ++A AL N L AE I K DE +
Sbjct: 142 VDPKNFRLQFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLA 201
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI V+FYTRKA +K+ A++ + +D DIP ++ +L+LPG+GPKM + + GW +
Sbjct: 202 NLIRCVSFYTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLI 261
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GICVD HVHR+C WV K + E TR+ LQ WLP W IN +LVGFGQ
Sbjct: 262 AGICVDVHVHRLCKMWNWVDPI----KCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQL 317
Query: 191 ICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
IC RC +C ++ C +A E SSK + E
Sbjct: 318 ICMARGKRCDLCLANDVC-NARNEKLIESSKFHQLED 353
>gi|323307092|gb|EGA60375.1| Ntg2p [Saccharomyces cerevisiae FostersO]
Length = 380
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 119/217 (54%), Gaps = 13/217 (5%)
Query: 19 LPPKERRFAVLLSALLSSLTKD-KVADGALQ--RLLQNGLHTAEAID-----KADEATIK 70
+ PK R L+ +LS+ T+D ++A AL N L AE I K DE +
Sbjct: 142 VDPKNFRLQFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLA 201
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI V+FYTRKA +K+ A++ + +D DIP ++ +L+LPG+GPKM + + GW +
Sbjct: 202 NLIRCVSFYTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLI 261
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GICVD HVHR+C WV K + E TR+ LQ WLP W IN +LVGFGQ
Sbjct: 262 XGICVDVHVHRLCKMXNWVDPI----KCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQL 317
Query: 191 ICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
IC RC +C ++ C +A E SSK + E
Sbjct: 318 ICMARGKRCDLCLANDVC-NARNEKLIESSKFHQLED 353
>gi|146419315|ref|XP_001485620.1| hypothetical protein PGUG_01291 [Meyerozyma guilliermondii ATCC
6260]
Length = 455
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 117/204 (57%), Gaps = 16/204 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVA--------DGALQRLLQNGLHTAEAIDKADEATIKDL 72
P+ RF +L+S +L S TKD+V D ++R NGL EA+ E I
Sbjct: 224 PRTYRFQLLISLMLLSQTKDEVNFAAIKTLDDELMKRGFPNGL-CLEAVLATSEQDINQC 282
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V F+ RKA +K+ +++ + GDIP ++ +++ALPG+GPKM +++ GW+ +G
Sbjct: 283 IQKVGFHHRKAGYIKRASQMLHDNHSGDIPDNIRDIVALPGVGPKMGYLLLQRGWYKNEG 342
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VD H+HR+ GWV+ K +PEQTR L+ WLP+ W INP+LVGFGQ IC
Sbjct: 343 IGVDVHIHRLAQMWGWVS-----AKARTPEQTRLELESWLPRRLWGDINPILVGFGQVIC 397
Query: 193 TPLRPRCGMCTVS--EYCPSAFKE 214
P C +CT+ + C A K+
Sbjct: 398 PPNYGNCDICTLGKQKLCKGANKK 421
>gi|296125919|ref|YP_003633171.1| DNA-(apurinic or apyrimidinic site) lyase [Brachyspira murdochii
DSM 12563]
gi|296017735|gb|ADG70972.1| DNA-(apurinic or apyrimidinic site) lyase [Brachyspira murdochii
DSM 12563]
Length = 227
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS TKD A RL + + + K E I LIYPV FY KA N
Sbjct: 37 YKILISTMLSLRTKDPTTRDASMRLFEKAGSPKDML-KLTEEEIAKLIYPVGFYKVKAKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++K+ + + G +P +DELL L G+G K+AN+V+T F+ GICVDTHVHRI NR
Sbjct: 96 ILEVSKMIIDDFGGKVPDEIDELLKLKGVGRKVANLVVTEA-FDKDGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PE+T AL+ LPKE W N LV +GQ +C P+ P C CTVS
Sbjct: 155 FGYV-------HTKTPEETEFALRDKLPKEYWRIYNDTLVVYGQNLCKPISPLCSKCTVS 207
Query: 206 EYC 208
+YC
Sbjct: 208 QYC 210
>gi|317037839|ref|XP_001402439.2| hypothetical protein ANI_1_176174 [Aspergillus niger CBS 513.88]
Length = 843
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 124/237 (52%), Gaps = 36/237 (15%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL-------------- 50
PV ++G E + P++RRF L++ +LSS TKD V A+QRL
Sbjct: 154 PVDTMGCAELYWRASSPRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGDQSTTIVKK 213
Query: 51 ------------LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYD 98
+++ E I + +LI V F+ K +K A I +YD
Sbjct: 214 EPEDYDWKPTDQVKDSTLNLENILAVTPERLNELIAKVGFHNNKTKYIKAAAIILRDQYD 273
Query: 99 GDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKT 158
DIPS+ EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW KT
Sbjct: 274 SDIPSTAPELMKLPGVGPKMAFLCMSAAWGKHEGIGVDVHVHRITNLWGW-------HKT 326
Query: 159 SSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFK 213
+PE+TR AL+ WLPK++W IN LLVG GQT+C P+ RCG C + ++ C S K
Sbjct: 327 KNPEETRMALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECDLAGTKLCKSEIK 383
>gi|303390292|ref|XP_003073377.1| endonuclease III [Encephalitozoon intestinalis ATCC 50506]
gi|303302523|gb|ADM12017.1| endonuclease III [Encephalitozoon intestinalis ATCC 50506]
Length = 238
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 124/221 (56%), Gaps = 23/221 (10%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLL------------ 51
+ PV ++G T S +ERRF +L+S LLSS TKD++ A++RL
Sbjct: 28 VSPVDTMGCFVTPSYKTEEERRFHILVSLLLSSQTKDEITYEAMERLRTLLPEGGAADGR 87
Query: 52 QNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL 111
GL T E + + I I V F+T+KA N+K+I +I K +P + +L++L
Sbjct: 88 DCGL-TMENVTSSSVGYIDSCIKRVGFHTKKAENLKRITEILREK---GLPEEMKDLVSL 143
Query: 112 PGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRW 171
PGIG KMA + M +V GI VDTHVHRI NR+G V KT E TR L++
Sbjct: 144 PGIGNKMAILYMNHACGSVVGISVDTHVHRISNRIGLV-------KTKDAESTRRELEKI 196
Query: 172 LPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAF 212
+PK EW IN +LVG+GQT+C RP+C C + CPS+F
Sbjct: 197 VPKREWETINRVLVGYGQTVCVARRPKCEECCIRSKCPSSF 237
>gi|323335667|gb|EGA76950.1| Ntg2p [Saccharomyces cerevisiae Vin13]
Length = 292
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 118/215 (54%), Gaps = 13/215 (6%)
Query: 21 PKERRFAVLLSALLSSLTKD-KVADGALQ--RLLQNGLHTAEAID-----KADEATIKDL 72
PK R L+ +LS+ T+D ++A AL N L AE I K DE + +L
Sbjct: 56 PKNFRLQFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANL 115
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V+FYTRKA +K+ A++ + +D DIP ++ +L+LPG+GPKM + + GW + G
Sbjct: 116 IRCVSFYTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIVG 175
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
ICVD HVHR+C WV K + E TR+ LQ WLP W IN +LVGFGQ IC
Sbjct: 176 ICVDVHVHRLCKMWNWVDPI----KCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLIC 231
Query: 193 TPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
RC +C ++ C +A E SSK + E
Sbjct: 232 MARGKRCDLCLANDVC-NARNEKLIESSKFHQLED 265
>gi|309791484|ref|ZP_07685988.1| DNA-(apurinic or apyrimidinic site) lyase [Oscillochloris
trichoides DG-6]
gi|308226481|gb|EFO80205.1| DNA-(apurinic or apyrimidinic site) lyase [Oscillochloris
trichoides DG6]
Length = 219
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ LLS TKD + RL + T A+ E I +LIYPV FY KA +
Sbjct: 37 FRILVATLLSLRTKDTLTAVVAPRLFAHA-DTPAAMLALGEQRIAELIYPVGFYHNKARS 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA + L +Y+G +PS L+ LL LPG+G K AN+V T G F + GICVD HVHRI NR
Sbjct: 96 LIAIAHMLLERYNGAVPSDLEALLTLPGVGRKTANLVRTAG-FGLPGICVDIHVHRITNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T P+ T AL+ LP + W+ IN LLV +GQ IC P PRC C V+
Sbjct: 155 WGYV-------ATKDPDATEMALRTMLPAQYWIPINRLLVTWGQNICHPTSPRCSTCPVA 207
Query: 206 EYC 208
YC
Sbjct: 208 TYC 210
>gi|190407301|gb|EDV10568.1| endonuclease III DNA base excision repair N-glycosylase
[Saccharomyces cerevisiae RM11-1a]
gi|207341351|gb|EDZ69433.1| YOL043Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256273941|gb|EEU08860.1| Ntg2p [Saccharomyces cerevisiae JAY291]
gi|259149442|emb|CAY86246.1| Ntg2p [Saccharomyces cerevisiae EC1118]
gi|323346595|gb|EGA80881.1| Ntg2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352347|gb|EGA84882.1| Ntg2p [Saccharomyces cerevisiae VL3]
gi|365763207|gb|EHN04737.1| Ntg2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 380
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 118/215 (54%), Gaps = 13/215 (6%)
Query: 21 PKERRFAVLLSALLSSLTKD-KVADGALQ--RLLQNGLHTAEAID-----KADEATIKDL 72
PK R L+ +LS+ T+D ++A AL N L AE I K DE + +L
Sbjct: 144 PKNFRLQFLIGTMLSAQTRDERMAQAALNITEYCLNTLKIAEGITLDGLLKIDEPVLANL 203
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V+FYTRKA +K+ A++ + +D DIP ++ +L+LPG+GPKM + + GW + G
Sbjct: 204 IRCVSFYTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLPGVGPKMGYLTLQKGWGLIVG 263
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
ICVD HVHR+C WV K + E TR+ LQ WLP W IN +LVGFGQ IC
Sbjct: 264 ICVDVHVHRLCKMWNWVDPI----KCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLIC 319
Query: 193 TPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSES 227
RC +C ++ C +A E SSK + E
Sbjct: 320 MARGKRCDLCLANDVC-NARNEKLIESSKFHQLED 353
>gi|448100402|ref|XP_004199342.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
gi|359380764|emb|CCE83005.1| Piso0_002778 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 17/205 (8%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGAL--------QRLLQNGLHTAEAIDKADEAT 68
S + P+ RF +L+S +LSS TKD+V A+ R ++GL T EA+ E
Sbjct: 125 SEMRPQVYRFQLLVSLILSSQTKDEVTYNAMLNLNRHLMDRGFEDGL-TLEAVLTLSETE 183
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ LI V F+ +KA + K A I D+P ++DE+ LPG+GPKMA +++ GW
Sbjct: 184 VDGLISKVGFHRKKAAYILKSAAILKETAGSDVPQTVDEITRLPGVGPKMAYLLIQRGWN 243
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
GI VD HVHR+ WV K+ +PE+TR ALQ WLP++ W INPLLVGFG
Sbjct: 244 INDGIGVDVHVHRLAQMWRWVP------KSDNPERTRLALQAWLPRKFWPEINPLLVGFG 297
Query: 189 QTICTPLRPRCGMCTVS--EYCPSA 211
Q +C P C +CT++ CPSA
Sbjct: 298 QVVCVPRAGNCDICTLATKRLCPSA 322
>gi|85860567|ref|YP_462769.1| endonuclease III N [Syntrophus aciditrophicus SB]
gi|85723658|gb|ABC78601.1| endonuclease III N [Syntrophus aciditrophicus SB]
Length = 206
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 9/177 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS TKD+V A +RL T E + + E I+ IYPV FY K+
Sbjct: 36 FLILISTVLSLRTKDEVTATATERLFSLA-STPETMLELSEEEIRQAIYPVGFYRNKSRQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+++I + + ++ +P SL++LL+L G+G K AN+V++LG F ICVDTHVHRI NR
Sbjct: 95 IREICRDLIERFSSRVPDSLEDLLSLKGVGQKTANLVLSLG-FEKDAICVDTHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
LG V+ T +PEQT ALQ LP+ W R N LLV FGQ +C PL P C C
Sbjct: 154 LGLVS-------TKTPEQTESALQNVLPRRYWSRYNTLLVSFGQRVCRPLSPLCSSC 203
>gi|344300617|gb|EGW30938.1| hypothetical protein SPAPADRAFT_156404 [Spathaspora passalidarum
NRRL Y-27907]
Length = 329
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 24/251 (9%)
Query: 2 KTLEPVYSLGVDETDSSLPP-------KERRFAVLLSALLSSLTKDKVADGALQRL---- 50
K + PV + G + ++ P K RF +L+S +LSS TKD+V A+ +L
Sbjct: 67 KFMAPVDTQGCERMPETISPGVSQSNSKVYRFQLLISLMLSSQTKDEVNFDAMTKLHKAM 126
Query: 51 LQNGLHTA---EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDE 107
L+ G EA+ E+ I LI V F+ RKA +K+ ++ + ++GDIP++++E
Sbjct: 127 LEKGYKDGLCIEAVLATSESDIDKLIAKVGFHNRKAGYIKRSCQMLIDSHNGDIPTTIEE 186
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREA 167
+ ALPG+GPKM +++ GW GI VD H+HR+ GWV+ +K ++PE+ R
Sbjct: 187 ITALPGVGPKMGYLLLQAGWGINSGIGVDVHLHRLAQMWGWVS-----KKATTPEKARLE 241
Query: 168 LQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPS-----AFKESSTSSSKS 222
L+ WLP++ W +NPL+VGFGQ +C C +C+++ C A KE S +
Sbjct: 242 LEDWLPRQYWKDVNPLMVGFGQVVCGSRAKNCDVCSLNTMCAGKDRKLAGKEVSKERLEK 301
Query: 223 KKSESSSLRKL 233
K++ + L L
Sbjct: 302 LKAQRADLSVL 312
>gi|291288305|ref|YP_003505121.1| DNA-(apurinic or apyrimidinic site) lyase [Denitrovibrio
acetiphilus DSM 12809]
gi|290885465|gb|ADD69165.1| DNA-(apurinic or apyrimidinic site) lyase [Denitrovibrio
acetiphilus DSM 12809]
Length = 219
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 118/208 (56%), Gaps = 13/208 (6%)
Query: 4 LEPVYSLGVDETDSSLPPKERR---FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
LE VY +DE + K+ R F VL+S L+S TKD+V A RL T E
Sbjct: 13 LEDVYR-NMDEPSVTKISKQTRRDPFRVLISCLISLRTKDEVTLAASNRLFAKA-DTPEK 70
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ I LIYP FY K+ + I +I L +YDG +P +DELL L G+G K AN
Sbjct: 71 MLTIPADEIAKLIYPAGFYKTKSNTITNICRILLDEYDGKVPDEIDELLKLKGVGRKTAN 130
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ G+ ICVDTHVHRI NRLG+V T +P++T L++ LP + W+RI
Sbjct: 131 LVVVEGY-GRDAICVDTHVHRIFNRLGYVA-------TKTPDKTEMELRKHLPIKYWIRI 182
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N +LV +G+ ICTP+ P C C +S+ C
Sbjct: 183 NEILVSYGREICTPVSPHCSYCRLSDIC 210
>gi|225848427|ref|YP_002728590.1| endonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644019|gb|ACN99069.1| probable endonuclease III (DNA-(apurinic orapyrimidinic site)
lyase) [Sulfurihydrogenibium azorense Az-Fu1]
Length = 216
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 112/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL++ +LS TKD++ A RL + T E + I+ LIYPV FY KA
Sbjct: 36 YKVLIATILSLRTKDQITALASDRLFKVA-DTPEKMVNLPAEEIEKLIYPVGFYKNKAKT 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I+KI L KY G +P +L++LL+L G+G K AN+V++ G + ICVD HVHRI NR
Sbjct: 95 IKEISKIILEKYAGKVPDNLEDLLSLKGVGRKTANLVLSEG-YKKPAICVDVHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V KT +PE+T L LPK+ W +N +LV FGQTIC P++P C +C V
Sbjct: 154 LGVV-------KTKTPEETEFKLMEILPKKYWRDVNWVLVAFGQTICKPIKPMCDICPVK 206
Query: 206 EYC 208
+C
Sbjct: 207 NFC 209
>gi|378727145|gb|EHY53604.1| endonuclease III [Exophiala dermatitidis NIH/UT8656]
Length = 468
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 122/219 (55%), Gaps = 26/219 (11%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G +E + PP+++R+ L S +LSS TKD V A+ RL + T E +
Sbjct: 195 PVDTMGCEELFWPTAPPRDKRYHTLTSLMLSSQTKDTVTAVAMHRLHTELVSTDEINPEE 254
Query: 65 DEATIK------------------DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
EA K +LI V F+ K +K+ A I +++ DIP +++
Sbjct: 255 GEAETKQSQLTIDNIISCDPKHLDNLIGKVGFHNNKTKYIKQAALILKERFNSDIPDTIE 314
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
L++LPG+GPKMA + M+ W +GI VD HVHRI N GW KT +PE+TR
Sbjct: 315 GLVSLPGVGPKMAYLCMSAAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRA 367
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L+ WLP+++W IN +LVG GQT+C P+ +CG C ++
Sbjct: 368 CLEAWLPRDKWHEINKMLVGLGQTVCLPVGRKCGECDLA 406
>gi|401623702|gb|EJS41791.1| ntg2p [Saccharomyces arboricola H-6]
Length = 381
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 115/202 (56%), Gaps = 14/202 (6%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKD-KVADGALQRL--------LQNGLHTAEAIDKADE 66
+ + PK R L+ +LS+ T+D ++A AL + G+ T + + K +E
Sbjct: 140 NEKVNPKNFRLQFLIGTMLSAQTRDERMAQAALNITGYCLETLKIPEGI-TLDGLLKIEE 198
Query: 67 ATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLG 126
+ + DLI V+FYTRKA +K+ A++ + +D DIP ++ LL+LPG+GPKM + + G
Sbjct: 199 SKLADLIRCVSFYTRKASFIKRTAQLLVANFDSDIPYDIEGLLSLPGVGPKMGYLTLQKG 258
Query: 127 WFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVG 186
W + GICVD HVHR+C+ WV K + E TR+ LQ WLP W IN +LVG
Sbjct: 259 WGLIAGICVDVHVHRLCSMWNWVDAV----KCKTAEHTRKELQTWLPHSLWYEINTVLVG 314
Query: 187 FGQTICTPLRPRCGMCTVSEYC 208
FGQ IC RC +C V+ C
Sbjct: 315 FGQLICMARSKRCDLCLVNNIC 336
>gi|294658207|ref|XP_460548.2| DEHA2F04180p [Debaryomyces hansenii CBS767]
gi|202952958|emb|CAG88864.2| DEHA2F04180p [Debaryomyces hansenii CBS767]
Length = 375
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 125/230 (54%), Gaps = 24/230 (10%)
Query: 2 KTLEPVYSLGVDETDSSLPP-------KERRFAVLLSALLSSLTKDKVADGALQRLLQNG 54
K L PV ++G + + P + RF +L+S +LSS TKD+V A+ R L +G
Sbjct: 121 KFLSPVDTMGCERIPEGISPNVAKTNPRVFRFQLLISLMLSSQTKDEVNFQAM-RNLHSG 179
Query: 55 LH--------TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
L + E+I E I I V F+ +KA +KK I + +D DIP ++
Sbjct: 180 LMALGHKDGLSLESIVTLSEGEIDAFISKVGFHRKKAAYIKKACAILQSNFDSDIPKNIT 239
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
+++ LPG+GPKM +++ GW GI VD H+HR+ GWV K+ PE TR
Sbjct: 240 DIVTLPGVGPKMGFLLLQRGWNINDGIGVDVHIHRLAQMWGWVA------KSEKPESTRT 293
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT--VSEYCPSAFKE 214
L+ WLPK+ W INPLLVGFGQ IC P C +CT +++ C S+ K+
Sbjct: 294 ELESWLPKKFWGDINPLLVGFGQVICVPKASNCDICTLGINKLCKSSNKK 343
>gi|171692077|ref|XP_001910963.1| hypothetical protein [Podospora anserina S mat+]
gi|170945987|emb|CAP72788.1| unnamed protein product [Podospora anserina S mat+]
Length = 1171
Score = 153 bits (386), Expect = 7e-35, Method: Composition-based stats.
Identities = 93/242 (38%), Positives = 134/242 (55%), Gaps = 34/242 (14%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL----------------LQNGLHTAE 59
D S K+RRF L++ +LSS TKD V A++RL L N LH
Sbjct: 204 DPSSTVKDRRFHTLVALMLSSQTKDTVNAEAMKRLHTELPPFEPGAPAGLNLNNMLHCPP 263
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
A+ + +LI V F+ K + + A+I K++GDIP +++ L++LPG+GPKMA
Sbjct: 264 AV-------LNELIGKVGFHNNKTKYLLQTAQILKDKFNGDIPPTIEGLVSLPGVGPKMA 316
Query: 120 NMVMTL--GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
++ M+ GW V+GI VD HVHRI N GW ++T +PE+TR ALQ WLPK++W
Sbjct: 317 HLCMSAENGWNRVEGIGVDVHVHRITNYWGW----NGPKETKTPEETRMALQSWLPKDKW 372
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFKESSTSSSKSK---KSESSSLRK 232
IN LLVG GQ++C P+ RCG C V C +A ++ K + + E + K
Sbjct: 373 KEINWLLVGLGQSVCLPVGRRCGDCEVGLKGLCKAADRKKVNEGKKRREGVRKEEELVEK 432
Query: 233 LE 234
+E
Sbjct: 433 IE 434
>gi|327304823|ref|XP_003237103.1| DNA base excision repair N-glycosylase [Trichophyton rubrum CBS
118892]
gi|326460101|gb|EGD85554.1| DNA base excision repair N-glycosylase [Trichophyton rubrum CBS
118892]
Length = 460
Score = 152 bits (385), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 122/228 (53%), Gaps = 40/228 (17%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT------- 57
PV ++G E S P++RRF L++ +LSS TKD V + RL HT
Sbjct: 155 PVDTMGCSELYWRSSSPRDRRFHTLIALMLSSQTKDTVTAATMLRL-----HTQLTDETS 209
Query: 58 ----AEAIDKADEAT----------------IKDLIYPVAFYTRKACNMKKIAKICLTKY 97
AE D+ + T + +LI V F+ K +K A+I ++
Sbjct: 210 DNPVAEVWDRDHQKTTSTLTLENMLAVSPERLNELIRAVGFHNNKTRYIKATAEILRDQF 269
Query: 98 DGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQK 157
D DIPS+++ L++LPG+GPKMA + M+ W +GI VD HVHRI N GW K
Sbjct: 270 DSDIPSTVEGLISLPGVGPKMAYLCMSSAWNKHEGIGVDVHVHRITNLWGW-------NK 322
Query: 158 TSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
T +PE TR AL+ WLP+++W IN LLVG GQT+C P+ RC C +S
Sbjct: 323 TKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCTECDLS 370
>gi|406982493|gb|EKE03804.1| Endonuclease III [uncultured bacterium]
Length = 211
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 110/188 (58%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ LLS TKD+ GA RL G T + K +E I+ IYPV FY K
Sbjct: 33 FKTLIACLLSLRTKDETTYGATLRLFNLG-STPDDFLKLNEEEIQKAIYPVGFYRNKTGV 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ I + L KY+G +P +DELL L G+G K AN+V++ G+ ICVDTHVHRI NR
Sbjct: 92 ILGICRDLLDKYNGIVPDEIDELLKLKGVGRKTANLVVSKGY-GKPAICVDTHVHRISNR 150
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V KT +P++T AL+ LPK+ W +IN L+V GQ C P+ P+C +CT+
Sbjct: 151 LGFV-------KTKNPDETEMALREKLPKKYWNKINDLMVTHGQNTCKPVNPKCNICTIE 203
Query: 206 EYCPSAFK 213
YC K
Sbjct: 204 PYCQKIIK 211
>gi|268575464|ref|XP_002642711.1| C. briggsae CBR-NTH-1 protein [Caenorhabditis briggsae]
Length = 272
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 130/229 (56%), Gaps = 26/229 (11%)
Query: 4 LEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
+ PV ++G + D PK RF VL++ +LSS T+D+V A++RL +GL + + I
Sbjct: 54 VAPVDTMGCHKLADPLAEPKIHRFQVLVALMLSSQTRDEVNAAAMKRLKDHGL-SIQTIR 112
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+ ++ ++ PV FY RKA +++ AKI Y GDIP +LD L +LPG+GPKMAN+V
Sbjct: 113 AFPVSDLEKILCPVGFYKRKAVYIQQTAKILEDSYSGDIPDTLDGLCSLPGVGPKMANLV 172
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
M + W G C W+ KT++PE+T++AL+ LP+ EW IN
Sbjct: 173 MQIAW----GKC-------------WI-------KTTTPEKTQKALESLLPRSEWQPINH 208
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLR 231
LLVGFGQ +C P+RP+C C CPS+ ++ K K +++
Sbjct: 209 LLVGFGQMLCQPVRPKCATCLCRLTCPSSTAKTGEKVEKLAKKSRKTVK 257
>gi|291280240|ref|YP_003497075.1| endonuclease III [Deferribacter desulfuricans SSM1]
gi|290754942|dbj|BAI81319.1| endonuclease III [Deferribacter desulfuricans SSM1]
Length = 220
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 114/183 (62%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S L+S TKD+V ++L + T + K ++ ++ ++YP FY +K
Sbjct: 38 FKVLVSCLISLRTKDEVTLEVSKKLFEVA-DTPNKLLKMEDEELEKILYPAGFYRKKVKV 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+++K + KY+G +P SL+ELL + G+G K AN+V+ G F+ +GICVDTHVHRICNR
Sbjct: 97 LKEVSKTLIEKYEGRVPDSLEELLKIKGVGRKTANLVLVEG-FDKEGICVDTHVHRICNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V KT +PEQT L++ LPK W + N +LV +GQ IC P+ P C C +
Sbjct: 156 LGVV-------KTKTPEQTEMDLRKILPKHMWKKWNEILVSYGQHICKPISPLCSACILY 208
Query: 206 EYC 208
+ C
Sbjct: 209 DKC 211
>gi|224005196|ref|XP_002296249.1| MutY family most like Nth1 [Thalassiosira pseudonana CCMP1335]
gi|209586281|gb|ACI64966.1| MutY family most like Nth1 [Thalassiosira pseudonana CCMP1335]
Length = 202
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 112/179 (62%), Gaps = 13/179 (7%)
Query: 18 SLPPKE-----RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL 72
+LP K R+ VL++ +LSS TKD V ++ L ++GL T E I K D + L
Sbjct: 32 ALPEKHLGEVVHRYQVLMALMLSSQTKDAVVGETMRSLQKHGL-TVENIHKTDSELLNKL 90
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V F+ K +K+ +I +T+Y+GDIPS+ DEL+ LPG+GPKMA +V ++ + V G
Sbjct: 91 IGKVGFHNNKTKYIKQATEIIITQYNGDIPSTADELMTLPGVGPKMAYIVESVAFGTVTG 150
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
I VDTH+HRI N+L WV + +PE TRE L+ WLP+++W +N L VGFGQ +
Sbjct: 151 IGVDTHMHRIFNQLAWV-------DSKNPEGTREQLEGWLPRDKWDEVNVLWVGFGQEV 202
>gi|409046617|gb|EKM56097.1| hypothetical protein PHACADRAFT_162146 [Phanerochaete carnosa
HHB-10118-sp]
Length = 191
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 114/190 (60%), Gaps = 8/190 (4%)
Query: 4 LEPVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEA 60
+ PV ++G ++ + P+ R + L+S +LSS TKD+V D A+ +L + G T EA
Sbjct: 7 VAPVDTMGCEQAQVKEVDPRACRISTLISLMLSSQTKDEVTDAAVSKLREAVGGTITVEA 66
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I ADE I D I V F+ RK +K+ A+ ++D D+P ++DEL +LPG+GPKMA
Sbjct: 67 ILSADENAIADAIAKVGFWRRKTQYIKQTAQKLRDEFDSDVPKTVDELCSLPGVGPKMAF 126
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+ + + W GI VD HVHRI NRLGW P T +PE+TR LQ WLPKE I
Sbjct: 127 LCLHVAWNINVGIGVDVHVHRITNRLGWHKPP-----TKTPEETRLNLQSWLPKELHAEI 181
Query: 181 NPLLVGFGQT 190
N LVGFGQ
Sbjct: 182 NHRLVGFGQV 191
>gi|83771969|dbj|BAE62099.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 269
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 127/240 (52%), Gaps = 40/240 (16%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL---LQNG----LHTAEAIDKADEATIK--- 70
P++RRF L++ +LSS TKD V A+QRL L +G + T+ ++ DE T K
Sbjct: 25 PRDRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIETSMIKEEPDEDTFKLEK 84
Query: 71 ---------------------DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELL 109
+LI V F+ K +K A I +Y DIPS+ +EL+
Sbjct: 85 PLRDSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELM 144
Query: 110 ALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQ 169
LPG+G KMA + M+ W +GI VD HVHRI N GW KT +PE TR+AL+
Sbjct: 145 KLPGVGLKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGW-------NKTKTPEDTRKALE 197
Query: 170 RWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFKESSTSSSKSKKSES 227
WLPK++W IN LLVG GQT+C P+ +CG C + ++ C S + +S K ES
Sbjct: 198 SWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDCDLAGTKLCKSEIRGLVSSRKVDAKEES 257
>gi|296806475|ref|XP_002844047.1| DNA base excision repair N-glycosylase 1 [Arthroderma otae CBS
113480]
gi|238845349|gb|EEQ35011.1| DNA base excision repair N-glycosylase 1 [Arthroderma otae CBS
113480]
Length = 371
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 120/231 (51%), Gaps = 43/231 (18%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G E S P++RRF L++ +LSS TKD V A+Q+L HT A + A
Sbjct: 111 PVDTMGCSELYWRSSSPRDRRFQTLIALMLSSQTKDTVTAAAMQKL-----HTQLADETA 165
Query: 65 DE------------------------------ATIKDLIYPVAFYTRKACNMKKIAKICL 94
D+ A + +LI V F+ K +K A+I
Sbjct: 166 DDKDKPVSEVWDHDHQAAPSTLTLENVLAVSPARLNELIGAVGFHNNKTKYIKATAEILR 225
Query: 95 TKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGT 154
++ DIPS++ L LPG+GPKMA + M+ W +GI VD HVHRI N GW
Sbjct: 226 DEFGSDIPSTIQGLTRLPGVGPKMAYLCMSSAWNRHEGIGVDVHVHRITNLWGW------ 279
Query: 155 KQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
KT +PE TR AL+ WLP+++W IN LLVG GQT+C P+ RC C +S
Sbjct: 280 -NKTKTPEATRAALESWLPRDKWHEINKLLVGLGQTVCLPVGRRCAECDLS 329
>gi|225850162|ref|YP_002730396.1| endonuclease III (DNA-(apurinic orapyrimidinic site) lyase)
[Persephonella marina EX-H1]
gi|225646537|gb|ACO04723.1| probable endonuclease III (DNA-(apurinic orapyrimidinic site)
lyase) [Persephonella marina EX-H1]
Length = 219
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S ++S TKD+V +RL + + + + K E I + IYP FY KA
Sbjct: 37 YQILISTIISLRTKDQVTAEVSERLFRLADNPYDML-KIPEEKIAEAIYPAGFYRNKAKV 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I+ + + G +P S+DELL L G+G K AN+V+ LG + ICVDTHVHRI NR
Sbjct: 96 IKEISGKIVKDFGGKVPDSIDELLKLKGVGRKTANLVVALG-YGKPAICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V KT + E+T AL++ +P+E W IN L V FGQTIC P+ P+C C VS
Sbjct: 155 LGFV-------KTKTAEETEMALRKKVPREYWNEINDLFVAFGQTICKPVSPKCSECPVS 207
Query: 206 EYC 208
YC
Sbjct: 208 SYC 210
>gi|156742725|ref|YP_001432854.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus castenholzii
DSM 13941]
gi|156234053|gb|ABU58836.1| DNA-(apurinic or apyrimidinic site) lyase [Roseiflexus castenholzii
DSM 13941]
Length = 219
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 14/206 (6%)
Query: 11 GVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIK 70
G+ E +++ P F +L++ +LS TKD + RL + E + E I
Sbjct: 27 GMGEEEANNP-----FRILIATILSLRTKDTMTAVVAPRLFAVA-DSPEKMLALSEEEIA 80
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LIYPV FY KA ++ I + + ++ G +P+ LD LLALPG+G K AN+V+T G F++
Sbjct: 81 ELIYPVGFYRNKARTIRAICRRLIEEHGGKVPADLDALLALPGVGRKTANLVLTAG-FDL 139
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GICVDTHVHRICNR G+V +T +PE+T L+ LP E W IN LLV GQ
Sbjct: 140 PGICVDTHVHRICNRWGYV-------QTRTPEETEMKLREILPFEYWKEINGLLVTLGQN 192
Query: 191 ICTPLRPRCGMCTVSEYCPSAFKESS 216
IC P PRC C ++ C E S
Sbjct: 193 ICHPTSPRCSACPLAHLCARVGVERS 218
>gi|148264846|ref|YP_001231552.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
gi|146398346|gb|ABQ26979.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter uraniireducens
Rf4]
Length = 218
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+DK A +RL T + TI+ IYPV FY KA
Sbjct: 36 FKVLVSCILSLRTQDKTTAAASERLFALA-GTPSDLGTLPTETIEKAIYPVGFYRVKAAQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K I+++ KY G +P +DELL G+G K AN+V+TLG + GICVDTHVHRICNR
Sbjct: 95 IKDISRLIQEKYAGRVPDEIDELLTFKGVGRKTANLVVTLG-YGKPGICVDTHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T +PEQT AL+ LP++ W+ IN LLV FGQ C P+ P C C ++
Sbjct: 154 WGYV-------QTKTPEQTEFALRGKLPRDYWLVINDLLVTFGQNQCLPVSPLCSTCPLA 206
Query: 206 EYC 208
+ C
Sbjct: 207 KMC 209
>gi|295667235|ref|XP_002794167.1| endonuclease III [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286273|gb|EEH41839.1| endonuclease III [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 122/252 (48%), Gaps = 63/252 (25%)
Query: 18 SLPPKERRFAVLLSALLSSLTKDKVADGALQRLL------QNGLHTAEA---IDKADEAT 68
S P++RRF +L++ +LSS TKD V A+QRL Q G T + I KA E
Sbjct: 195 SSSPRDRRFHILIALMLSSQTKDTVTALAMQRLHTELGSEQGGTDTDDGTRIIKKAGEGK 254
Query: 69 IK---------------------------------------------DLIYPVAFYTRKA 83
IK LI + F+ K
Sbjct: 255 IKVEAEAEAEAQEDQEMKGLVWDHTKQQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKT 314
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+K+ A I +YD DIP +++ L+ LPG+GPKMA + M+ W +GI VD HVHRI
Sbjct: 315 KYIKEAAIILRDEYDSDIPPTIEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRIT 374
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
N GW KT +PE+TR AL+ WLP+++W IN LLVG GQT+C P+ RCG C
Sbjct: 375 NLWGW-------HKTKTPEETRAALESWLPRDKWHEINKLLVGLGQTVCLPVARRCGECE 427
Query: 204 V--SEYCPSAFK 213
+ S C S K
Sbjct: 428 LAGSGLCKSEVK 439
>gi|149247468|ref|XP_001528146.1| hypothetical protein LELG_00666 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448100|gb|EDK42488.1| hypothetical protein LELG_00666 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 408
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 113/191 (59%), Gaps = 12/191 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT-------AEAIDKADEATIKDLI 73
PK+ RF +L+S +LSS TKD+V A+ +L + L E++ K I I
Sbjct: 181 PKKYRFQLLISLMLSSQTKDEVNYDAMVKLERGLLRHFPKLGFCLESMSKLSPNEIDAYI 240
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V F+ RKA ++K +I + ++GDIP ++ E++ LPG+GPKM +++ GW GI
Sbjct: 241 AKVGFHNRKAQYIQKACQILINDFNGDIPKTIQEIVKLPGVGPKMGYLLLQCGWGINLGI 300
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD H+HR+ WVT K S+PE+ R L+ WLPK+ W+ +NPL+VGFGQ IC
Sbjct: 301 GVDVHLHRLAEMWHWVT-----PKASTPEKCRLELESWLPKKYWIDVNPLMVGFGQVICV 355
Query: 194 PLRPRCGMCTV 204
P P C +C++
Sbjct: 356 PRAPNCDICSL 366
>gi|288817355|ref|YP_003431702.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|384128125|ref|YP_005510738.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobacter
thermophilus TK-6]
gi|288786754|dbj|BAI68501.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308750962|gb|ADO44445.1| DNA-(apurinic or apyrimidinic site) lyase [Hydrogenobacter
thermophilus TK-6]
Length = 216
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 111/188 (59%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ AL+S+ TKD+ +RL + + + + DE + L+YPV FY KA
Sbjct: 36 FRVLVCALISTRTKDETTAMVCKRLFER-IKNVDDLYNIDEEELSRLLYPVGFYKNKAKF 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K IA+ Y +P+ L++LL L G+G K+AN+V++ G + + ICVDTHVHRI NR
Sbjct: 95 LKSIAEEIKKNYSSQVPNKLEDLLKLKGVGRKVANLVLSEG-YGIPAICVDTHVHRITNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+ K+ PE+T L LP++ W+ N LLV FGQT+C P++P CG+C +
Sbjct: 154 WCLI-------KSKDPEETERKLTEILPEKYWIEFNKLLVAFGQTLCKPVKPLCGVCPIR 206
Query: 206 EYCPSAFK 213
EYC FK
Sbjct: 207 EYCEYEFK 214
>gi|452209864|ref|YP_007489978.1| Endonuclease III [Methanosarcina mazei Tuc01]
gi|452099766|gb|AGF96706.1| Endonuclease III [Methanosarcina mazei Tuc01]
Length = 205
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+S ++S T+D V A ++L + T E + +AD I++LI V FY KA
Sbjct: 26 FFALISTVMSHRTRDDVTYPAAKKLFER-FSTPEEMVEADVEDIEELIRDVGFYRVKAGR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I++I L Y+G +P ++ LL LPG+G K AN V+ + + VDTHVHRI NR
Sbjct: 85 IKEISRILLEDYNGRVPDDMETLLKLPGVGRKTANCVLAHAFLKEDALAVDTHVHRISNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T +PE+T L++ LP++ W +N LLV FGQ +C P+ PRCG+C ++
Sbjct: 145 LGLVV-------TKNPEETEMELKKLLPQKYWRHVNILLVKFGQNVCRPISPRCGICVLN 197
Query: 206 EYCP 209
+ CP
Sbjct: 198 DICP 201
>gi|392376190|ref|YP_003208023.1| Endonuclease III [Candidatus Methylomirabilis oxyfera]
gi|258593883|emb|CBE70224.1| putative Endonuclease III [Candidatus Methylomirabilis oxyfera]
Length = 219
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 112/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS TKD++ A +RL + + I E I IYPV+FY KA
Sbjct: 37 FRVLISCILSQQTKDQITGEASERLYRLA-DRPDTILALSELQIARAIYPVSFYKTKART 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++K+ + LT++DG +P +++ LL+L G+G K AN+V+T+G + GICVDTHVHRI NR
Sbjct: 96 IRKVCQDLLTRFDGRVPDTIEALLSLTGVGRKTANLVVTVG-YRKPGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V+ T +PEQT AL+ LPK W+ N LLV FGQ +C P+ P C C +
Sbjct: 155 WGYVS-------TRTPEQTEMALRLKLPKRHWIYYNDLLVPFGQNLCRPISPFCSRCPIE 207
Query: 206 EYC 208
+C
Sbjct: 208 RWC 210
>gi|257075651|ref|ZP_05570012.1| endonuclease III [Ferroplasma acidarmanus fer1]
Length = 217
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD V D A R L N H + ++ AD A +K +I V F K+
Sbjct: 27 FWILITTILSHRTKDIVTDQA-ARSLYNKYHDSVGLENADPADVKAIIKYVGFSNVKSLR 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +IA+I +Y G +P + DEL+ LPG G K AN+V+T G FN+ I VDTHV R+ NR
Sbjct: 86 IIEIARIINHEYGGKVPDTHDELVKLPGTGSKTANIVLTQG-FNIPAIAVDTHVFRVSNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V T +P++T EAL+ +P E V NP++V FG+ IC P+ PRC +C VS
Sbjct: 145 IGLV-------HTKNPDETEEALKSIVPLEYQVEFNPVMVEFGKNICKPVSPRCNICPVS 197
Query: 206 EYCPS-AFKESSTSSSKSKK 224
+ C A K + ++ KSKK
Sbjct: 198 DCCDYFAQKNTGDTAIKSKK 217
>gi|340517593|gb|EGR47837.1| hypothetical protein TRIREDRAFT_30805 [Trichoderma reesei QM6a]
Length = 250
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 122/220 (55%), Gaps = 18/220 (8%)
Query: 15 TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL------LQNGLHTAEAIDK---AD 65
D + PK++R L++ +LSS TKD V ++RL + G +D D
Sbjct: 37 ADPNASPKDQRLHSLIALMLSSQTKDTVTAVVMRRLQTELPACRPGAPVGLNLDNLLAVD 96
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
+ +I+ V F+ K +KK A+I +++GDIP +++ L +LPG+GPKMA + +++
Sbjct: 97 ANLLNQMIWAVGFHNNKTKYIKKAAEILRDEWNGDIPDTVEGLTSLPGVGPKMAYLCLSV 156
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +GI VD HVHRI N GW KT +PE+TR ALQ WLP++ W IN LLV
Sbjct: 157 AWNRTEGIGVDVHVHRITNMWGW-------HKTKNPEETRLALQSWLPRDRWREINGLLV 209
Query: 186 GFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSK 223
G GQ++C P+ RCG C + C +A ++ + K
Sbjct: 210 GLGQSVCLPVGRRCGECDLGLQGLCKAAERKKVIEGRRVK 249
>gi|374316259|ref|YP_005062687.1| putative endoIII-related endonuclease [Sphaerochaeta pleomorpha
str. Grapes]
gi|359351903|gb|AEV29677.1| putative endoIII-related endonuclease [Sphaerochaeta pleomorpha
str. Grapes]
Length = 220
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 113/187 (60%), Gaps = 9/187 (4%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K+ F VL+S L+S TKD+V A ++L T A+ + I++ IYP FY
Sbjct: 34 KQDPFRVLVSTLISLRTKDEVTLQASRKLFSLA-DTPHAMLLLGQKAIEEAIYPAGFYKT 92
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
KA N+ I++I Y+G +PSS ++LL LPG+G K AN+ + LG F ++ ICVD HVH+
Sbjct: 93 KAKNLLAISEILEMTYNGKVPSSSEKLLQLPGVGIKTANLTLNLG-FGIEAICVDCHVHQ 151
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I NR+GWV T +PEQT +ALQ +PK W+ +N LLV +GQ ICT + P C
Sbjct: 152 IANRMGWVA-------TKTPEQTEQALQTVMPKRFWIPLNELLVVYGQYICTSVSPWCSK 204
Query: 202 CTVSEYC 208
C+ + C
Sbjct: 205 CSETATC 211
>gi|358388627|gb|EHK26220.1| hypothetical protein TRIVIDRAFT_17977, partial [Trichoderma virens
Gv29-8]
Length = 249
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 16/199 (8%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL------LQNGLHTAEAIDK---ADE 66
D + PK++R L++ +LSS TKD V +++L + G +D D
Sbjct: 38 DRNASPKDQRLHSLIALMLSSQTKDTVTAVVMRKLQTELPAYKPGAPVGLNLDNLLAVDA 97
Query: 67 ATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLG 126
+ ++I+ V F+ K +KK A+I +++GDIP +++ L +LPG+GPKMA + +++
Sbjct: 98 NLLNEMIWAVGFHNNKTKYIKKTAEILRDEWNGDIPDTVEGLTSLPGVGPKMAYLCLSVA 157
Query: 127 WFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVG 186
W +GI VD HVHRI N GW KT +PE+TR ALQ WLP + W IN LLVG
Sbjct: 158 WNRTEGIGVDVHVHRITNMWGW-------NKTKNPEETRLALQSWLPHDRWREINGLLVG 210
Query: 187 FGQTICTPLRPRCGMCTVS 205
GQ++C P+ RCG C +
Sbjct: 211 LGQSVCLPVGRRCGECDLG 229
>gi|336121854|ref|YP_004576629.1| DNA-(apurinic or apyrimidinic site) lyase [Methanothermococcus
okinawensis IH1]
gi|334856375|gb|AEH06851.1| DNA-(apurinic or apyrimidinic site) lyase [Methanothermococcus
okinawensis IH1]
Length = 397
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 118/188 (62%), Gaps = 12/188 (6%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R F VL+S +LS+ TKD+ +RL + + + + +++ ++ IYPV FY KA
Sbjct: 77 RAFKVLISTVLSARTKDETTSEVSKRLFKR-IKNIDDLVTINQSELEKHIYPVGFYKTKA 135
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
++K++AKI Y+G IP+ L++L+ LPG+G K AN+V+TL F+ GICVDTHVHRIC
Sbjct: 136 KHLKELAKIVKNDYNGKIPNRLEDLIKLPGVGRKTANLVITLA-FDDYGICVDTHVHRIC 194
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC- 202
NR +V T +P +T L++ LPK+ W IN LLV +G+ +C+P+ P+C C
Sbjct: 195 NRWEYVD-------TENPNETEAELRKKLPKKYWKIINNLLVVYGREVCSPI-PKCDKCF 246
Query: 203 -TVSEYCP 209
+ E CP
Sbjct: 247 DEIKEICP 254
>gi|226291738|gb|EEH47166.1| endonuclease III [Paracoccidioides brasiliensis Pb18]
Length = 474
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 122/252 (48%), Gaps = 63/252 (25%)
Query: 18 SLPPKERRFAVLLSALLSSLTKDKVADGALQRLL------QNGLHTAEA---IDKADEAT 68
S P+ERRF +L++ +LSS TKD V A+QRL + G T + I KA E
Sbjct: 195 SSSPRERRFHILIALMLSSQTKDTVTALAMQRLHTELGSERAGTDTDDGTQIIKKAGEGG 254
Query: 69 IK---------------------------------------------DLIYPVAFYTRKA 83
IK LI + F+ K
Sbjct: 255 IKVKAEAEAEAQDDQEMKELVWDHTKQQAKSTLTLENILAVSPTRLNQLIQTIGFHNNKT 314
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+K+ A I +YD DIP +++ L+ LPG+GPKMA + M+ W +GI VD HVHRI
Sbjct: 315 KYIKEAAIILRDEYDSDIPPTIEGLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRIT 374
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
N GW KT +PE+TR AL+ WLP+++W IN LLVG GQT+C P+ RCG C
Sbjct: 375 NLWGW-------HKTKTPEETRAALESWLPRDKWHEINKLLVGLGQTVCLPVARRCGECE 427
Query: 204 V--SEYCPSAFK 213
+ S C S K
Sbjct: 428 LAGSGLCKSEVK 439
>gi|336476216|ref|YP_004615357.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosalsum zhilinae
DSM 4017]
gi|335929597|gb|AEH60138.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosalsum zhilinae
DSM 4017]
Length = 203
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 118/187 (63%), Gaps = 9/187 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D++ A RL+ + +A+ + +A+ + I++LI V FY K+
Sbjct: 26 FYVLISTVLSHRTRDEITYRASSRLM-DKFRSAQEMAEAEVSEIEELIKDVGFYRVKSRR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+IA+I + +Y G++P + + LL LPG+G K AN V+ L F+ + I VDTHVHRI NR
Sbjct: 85 VKEIAEILMYRYGGEVPDNCELLLELPGVGRKTANCVL-LYAFSKETIAVDTHVHRISNR 143
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V K+S+P++T E L++ LP+ W IN L V FGQ IC P+ P+C +C +
Sbjct: 144 LGLV-------KSSTPDETEEKLKKILPRSSWKDINELFVQFGQNICRPVSPKCDICVLC 196
Query: 206 EYCPSAF 212
CP F
Sbjct: 197 NICPGLF 203
>gi|406868323|gb|EKD21360.1| HhH-GPD superfamily base excision DNA repair protein [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 441
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 110/195 (56%), Gaps = 18/195 (9%)
Query: 18 SLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEA 67
++ P +R+ L + +LSS TKD A+ RL GL+ E I D
Sbjct: 156 TVTPLVKRYHTLTALMLSSQTKDTTNAQAMNRLYTELPAYKEGAPVGLNL-ENILAVDPK 214
Query: 68 TIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW 127
+ +LI+ V F+ K +K A+I +Y+GDIP +++ L++LPG+GPKM + ++ W
Sbjct: 215 LLNELIWAVGFHNNKTKYIKATAEILRDQYNGDIPDTIEGLMSLPGVGPKMGYLCLSAAW 274
Query: 128 FNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGF 187
+GI VD HVHRI N GW KT PEQ+R ALQ WLPKE W IN +LVG
Sbjct: 275 GKHEGIGVDVHVHRITNLWGW-------HKTKGPEQSRIALQSWLPKELWHEINWVLVGL 327
Query: 188 GQTICTPLRPRCGMC 202
GQTIC P+ +CG C
Sbjct: 328 GQTICLPVGRKCGEC 342
>gi|333910096|ref|YP_004483829.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris igneus Kol
5]
gi|333750685|gb|AEF95764.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris igneus Kol
5]
Length = 344
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 13/209 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS+ TKD+V + +RL + + + + K D ++ LIYPV FY KA N
Sbjct: 27 FKVLISTILSARTKDEVTEEVSKRLFEK-VKNVDDLLKIDLEELEKLIYPVGFYRMKAKN 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+AKI Y+G +P+ LDELL LPG+G K AN+V+TL F+ GICVDTHVHRICNR
Sbjct: 86 LKKLAKILKENYNGKVPNELDELLKLPGVGRKTANLVITLA-FDDYGICVDTHVHRICNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC--T 203
G+V +T +PE+T L++ LPK+ W IN LLV FG+ IC+P P+C C
Sbjct: 145 WGYV-------ETENPEETEMELRKKLPKKYWKIINNLLVVFGREICSPT-PKCEECFEE 196
Query: 204 VSEYCPSAFKESSTSSSKSKKSESSSLRK 232
+ E CP +K+ + KK E + K
Sbjct: 197 IRERCP-YYKKIAYFDEILKKYEFEKVSK 224
>gi|365989664|ref|XP_003671662.1| hypothetical protein NDAI_0H02450 [Naumovozyma dairenensis CBS 421]
gi|343770435|emb|CCD26419.1| hypothetical protein NDAI_0H02450 [Naumovozyma dairenensis CBS 421]
Length = 467
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 112/184 (60%), Gaps = 15/184 (8%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---------NGLHTAEAIDKADEA 67
+ + PK R+ VL S +LS+ TKD+V A+ +++ GL T E I + DE
Sbjct: 151 NEIEPKNYRYQVLTSVMLSAQTKDEVTAKAMYNIMRYCIDELGIPQGL-TLEGILQMDED 209
Query: 68 TIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW 127
I +LI V F+TRKA +K A++ T + D+P+++ +LL+LPG+GPKMA + + W
Sbjct: 210 VIDELIKSVGFHTRKAHFIKMSAEMIRTNFQSDVPTNIPDLLSLPGVGPKMAYLTLQKAW 269
Query: 128 FNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGF 187
++GICVD HVHR+C WV P +K +PEQTR+ LQ WLP W IN LLVG+
Sbjct: 270 GKMEGICVDVHVHRLCKLFKWV-DPNSK----NPEQTRKELQSWLPPILWREINSLLVGY 324
Query: 188 GQTI 191
GQ I
Sbjct: 325 GQII 328
>gi|302039433|ref|YP_003799755.1| endonuclease III [Candidatus Nitrospira defluvii]
gi|300607497|emb|CBK43830.1| Endonuclease III [Candidatus Nitrospira defluvii]
Length = 219
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S LLS TKDK A +RL + T + I+ IYPV FY KA
Sbjct: 37 FLVLISCLLSLRTKDKTTAEASERLFALAV-TPATMQTLTIPIIERAIYPVGFYRTKAKQ 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+++I L +Y G +P +DELL LPG+G K AN+V+T+G + GICVD HVHRI NR
Sbjct: 96 IQQICAQLLERYQGRVPDKIDELLTLPGVGRKTANLVVTVG-YEKPGICVDIHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V KT SP++T AL+ LP++ W+ N LLV +GQ +C P+ P C C ++
Sbjct: 155 WGYV-------KTKSPDETETALRAKLPRKYWITFNDLLVPYGQHLCQPVSPLCSQCKIA 207
Query: 206 EYC 208
YC
Sbjct: 208 AYC 210
>gi|333999302|ref|YP_004531914.1| endonuclease III protein [Treponema primitia ZAS-2]
gi|333738187|gb|AEF83677.1| endonuclease III protein [Treponema primitia ZAS-2]
Length = 263
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 119/198 (60%), Gaps = 11/198 (5%)
Query: 13 DETDSSLPPKERR--FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIK 70
D + +++ + RR +AVL S +LS TKD+V Q LL+ T EA+ I+
Sbjct: 66 DPSVTTVAERYRRNPWAVLASTILSLRTKDEVTLSRSQALLEKA-PTPEALLGLTTEKIE 124
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
LIYPV FY KA N++KIA I + Y G +P+ ++ LLALPG+G K AN+V+T F++
Sbjct: 125 KLIYPVGFYHTKAQNLQKIAAILMESYKGQVPADMELLLALPGVGRKTANLVLTEA-FDM 183
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GICVD HVHRI NRLG + ++ +PE T L+ LPK+ W RIN LLV +GQ
Sbjct: 184 DGICVDVHVHRISNRLGVL-------ESKNPEGTEMILREILPKKYWKRINILLVLYGQR 236
Query: 191 ICTPLRPRCGMCTVSEYC 208
+C P+ P C C + C
Sbjct: 237 VCRPISPFCSRCVMPGLC 254
>gi|225679960|gb|EEH18244.1| endonuclease III lyase [Paracoccidioides brasiliensis Pb03]
Length = 474
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/265 (35%), Positives = 128/265 (48%), Gaps = 64/265 (24%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLL------QNGLHTA 58
PV ++G + S P+ERRF +L++ +LSS TKD V A+QRL + G T
Sbjct: 182 PVDTMGCSQLYWRSSSPRERRFHILIALMLSSQTKDTVTALAMQRLHTELGSERAGTDTD 241
Query: 59 EA---IDKADEATIK--------------------------------------------- 70
+ I KA E IK
Sbjct: 242 DGTQIIKKAGEGGIKVKAEAEAEAQEDQEMKELVWDHTKQQAKSTLTLENILAVSPTRLN 301
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
LI + F+ K +K+ A I +YD DIP +++ L+ LPG+GPKMA + M+ W
Sbjct: 302 QLIQTIGFHNNKTKYIKEAAIILRDEYDSDIPPTIEGLMRLPGVGPKMAYLCMSSAWGRD 361
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GI VD HVHRI N GW KT +PE+TR AL+ WLP+++W IN LLVG GQT
Sbjct: 362 EGIGVDVHVHRITNLWGW-------HKTKTPEETRAALESWLPRDKWHEINKLLVGLGQT 414
Query: 191 ICTPLRPRCGMCTV--SEYCPSAFK 213
+C P+ RCG C + S C S K
Sbjct: 415 VCLPVARRCGECELAGSGLCKSEVK 439
>gi|298675584|ref|YP_003727334.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalobium
evestigatum Z-7303]
gi|298288572|gb|ADI74538.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalobium
evestigatum Z-7303]
Length = 203
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 114/184 (61%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS T+D V + + + L N ++ + DE I+ LI V FY K
Sbjct: 26 FYVLITTVLSQRTRDSVTNSSAKTLF-NKYNSPNELVHTDEDEIESLIKNVGFYRVKTQR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I+++ L +YDG +P +L++LL LPG+G K AN V+T F+ + I VDTHVHRI NR
Sbjct: 85 IKQISEMILDEYDGQVPDNLNDLLKLPGVGRKTANCVLTYA-FSKKAIAVDTHVHRISNR 143
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V +T +PE+T + L++ +P+ W +IN L V FGQ C P+ PRC +C ++
Sbjct: 144 LGLV-------ETKTPEKTEKDLKKIVPENLWNKINELFVRFGQNTCRPVSPRCDVCVLN 196
Query: 206 EYCP 209
+ CP
Sbjct: 197 DTCP 200
>gi|160902834|ref|YP_001568415.1| endonuclease III [Petrotoga mobilis SJ95]
gi|160360478|gb|ABX32092.1| endonuclease III [Petrotoga mobilis SJ95]
Length = 210
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 111/185 (60%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ +LS TKD+ + A + L + E I K + + DLI P Y +K+
Sbjct: 26 FKVLIETVLSQRTKDENTEKASKSLFSCYTNVFE-ISKLNPQDLYDLIKPAGMYKQKSER 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ I+KI + KY+G +P L+EL+ LPG+G K AN+V+ + F + + VDTHVHRI NR
Sbjct: 85 IINISKILIEKYNGKVPDELEELIELPGVGRKTANIVLYVS-FGKEALAVDTHVHRISNR 143
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +PE+T E L++ +P E W +N +V FGQ IC P+ P+C C ++
Sbjct: 144 LGWV-------KTKTPEETEEQLKKIIPSELWGPLNGSMVNFGQKICKPISPKCDECFLN 196
Query: 206 EYCPS 210
E CP+
Sbjct: 197 EVCPA 201
>gi|367036841|ref|XP_003648801.1| hypothetical protein THITE_2106660 [Thielavia terrestris NRRL 8126]
gi|346996062|gb|AEO62465.1| hypothetical protein THITE_2106660 [Thielavia terrestris NRRL 8126]
Length = 465
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 112/193 (58%), Gaps = 20/193 (10%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATIKD 71
++RRF L++ +LSS TKD V A+ RL GL+ E + D A + +
Sbjct: 192 RDRRFQTLVALMLSSQTKDTVNAEAMARLHNELPPHKPGAPPGLNL-ENMLAVDPALLNE 250
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL--GWFN 129
LI V F+ K +K+ A I + + DIP ++ L +LPG+GPKMA++ M+ GW
Sbjct: 251 LIGKVGFHNNKTKYLKQTASILQSDFASDIPPTVAGLCSLPGVGPKMAHLCMSAANGWGR 310
Query: 130 VQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
V+G+ VD HVHRI N GW T +PE+TR AL+ WLP++ W IN LLVGFGQ
Sbjct: 311 VEGVGVDVHVHRITNLWGW-------HATRTPEETRRALEAWLPRDRWREINWLLVGFGQ 363
Query: 190 TICTPLRPRCGMC 202
T+C P+ RCG C
Sbjct: 364 TVCLPVGRRCGDC 376
>gi|346319387|gb|EGX88989.1| DNA repair protein Ntg1, putative [Cordyceps militaris CM01]
Length = 396
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 20/205 (9%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGL--HTAEA--------IDKADEATIKD 71
K++RF L++ ++SS TKD V + + R LQ L H A I D T+
Sbjct: 154 KDQRFHTLIALMMSSQTKDTV-NAVVMRKLQTELPAHKPGAPVGLNLDNILAVDPDTLNK 212
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
+I+ V F+ K +K+ A+I +++GDIP +++ L ALPG+GPKM + ++ W +
Sbjct: 213 MIWAVGFHNNKTKYIKQAAEILRDEWNGDIPDTIEGLTALPGVGPKMGYLCLSAAWGKTE 272
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
GI VD HVHRI N GW T +PE TR ALQ WLP++ W IN LLVG GQ +
Sbjct: 273 GIGVDVHVHRITNMWGW-------HATKNPEATRLALQSWLPRDRWREINGLLVGLGQAV 325
Query: 192 CTPLRPRCGMCTV--SEYCPSAFKE 214
C P+ RCG C V S C +A ++
Sbjct: 326 CVPVGQRCGSCDVGLSGLCKAADRK 350
>gi|312136836|ref|YP_004004173.1| endonuclease iii ;DNA-(apurinic or apyrimidinic site) lyase
[Methanothermus fervidus DSM 2088]
gi|311224555|gb|ADP77411.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Methanothermus fervidus DSM 2088]
Length = 209
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 117/208 (56%), Gaps = 17/208 (8%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K L+ +Y + + D + VL+ +LS TKD+ A ++L + T E
Sbjct: 11 LKKLKELYPEKIKQRDP--------YKVLIETILSQRTKDENTKKASKKLF-SKYDTIEK 61
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I A E ++ LI V FY KA +KKI+KI + KYDG +P +L ELL LPG+G K AN
Sbjct: 62 IANAQEKDLEKLIKCVGFYRVKAKRIKKISKILINKYDGKVPKNLKELLKLPGVGRKTAN 121
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
V+ G FN I VDTHVHR+ NR+G V T +PE+T + L++ +P++ W +
Sbjct: 122 CVLVYG-FNEDAIPVDTHVHRVANRIGLVN-------TKTPEETEKTLRKIIPRDYWKEV 173
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N L V FG+ IC P P+ C + ++C
Sbjct: 174 NKLFVEFGKNICKPTNPKHEKCPIKKFC 201
>gi|150401058|ref|YP_001324824.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
gi|150013761|gb|ABR56212.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus aeolicus
Nankai-3]
Length = 357
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 116/186 (62%), Gaps = 12/186 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS+ TKD+ D +RL + + + I+ D +++LIYPV FY KA +
Sbjct: 37 FKVLISTVLSARTKDETTDEVSKRLYKKVKNIDDLIN-IDIEELQELIYPVGFYKTKAKH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++A + Y+G IP+ ++EL+ LPG+G K AN+V+TL F+ GICVDTHVHRI NR
Sbjct: 96 LKELALMVKNNYNGKIPNDINELVKLPGVGRKTANLVITLA-FDDYGICVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT-- 203
+V P SPE+T L++ LPK+ W IN LV +G+ +C P+ P+C C
Sbjct: 155 WNFVNTP-------SPEKTEMELRKKLPKKYWKTINNSLVVYGREVCAPI-PKCSKCIQE 206
Query: 204 VSEYCP 209
+ E CP
Sbjct: 207 IKETCP 212
>gi|50555097|ref|XP_504957.1| YALI0F03641p [Yarrowia lipolytica]
gi|49650827|emb|CAG77764.1| YALI0F03641p [Yarrowia lipolytica CLIB122]
Length = 483
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 13/207 (6%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ-----NGLHTAE 59
PV ++G + +P K +RF +L+S +LSS TKD+V A+ L + + L + +
Sbjct: 249 PVDTMGCERLVQDGVPAKVQRFQLLISLMLSSQTKDEVTCQAVLNLREFLKSRDLLLSVD 308
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
I I I V F+ RKA + + + + + GDIP ++ + +LPG+GPKMA
Sbjct: 309 GILSMSVGEIDGCISKVGFHNRKADYISRATALLVKDFGGDIPPTIAAMTSLPGVGPKMA 368
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
+++M W +GI VD HVHR+ N GWV K +PE++R L++WLP+E WV
Sbjct: 369 HLLMHRAWGVNEGIGVDVHVHRLANMWGWV-------KGKTPEESRVQLEKWLPQELWVD 421
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVSE 206
INP LVGFGQT+C +CG+C V +
Sbjct: 422 INPTLVGFGQTVCPSKGKKCGVCIVDK 448
>gi|189424391|ref|YP_001951568.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter lovleyi SZ]
gi|189420650|gb|ACD95048.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter lovleyi SZ]
Length = 218
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S ++S TKD V A RL + + EA+ + I DLIYP FY KA
Sbjct: 36 FHVLVSCIISLRTKDAVTAAASARLFERAA-SPEAMICLTPSEIADLIYPAGFYRTKAEQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ I + LT+Y+G +P +L++LL L G+G K AN+VMTLG + QGICVD HVHRI NR
Sbjct: 95 IHAICRTLLTEYNGSVPDNLEQLLRLKGVGRKTANLVMTLG-HDKQGICVDIHVHRITNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V + SP++T + L+ LP E W +IN LLV +GQ +C P+ P C C +
Sbjct: 154 WGYV-------NSGSPDETEQFLREKLPAEYWKKINDLLVCYGQNLCYPVSPACSRCRLL 206
Query: 206 EYC 208
+ C
Sbjct: 207 DCC 209
>gi|322419437|ref|YP_004198660.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
gi|320125824|gb|ADW13384.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M18]
Length = 218
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D+ A RL + + + + I++ IYPV FY KA
Sbjct: 36 FKVLVSCILSLRTRDQTTAEASARLFALA-GSPQKMVRLSVPQIEEAIYPVGFYRVKAEQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I++ Y G++P L+ LL G+G K AN+V+TLG F+ GICVD HVHRICNR
Sbjct: 95 IFEISRQLCELYQGEVPDDLETLLKFKGVGRKTANLVLTLG-FSKPGICVDIHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V KT++PEQT AL++ LP E W+ IN LLV FGQ CTP+ PRC C +
Sbjct: 154 WGYV-------KTATPEQTEFALRKKLPVEYWIIINDLLVTFGQNQCTPVSPRCSTCPLY 206
Query: 206 EYC 208
++C
Sbjct: 207 QFC 209
>gi|296004674|ref|XP_966134.2| endonuclease III homologue, putative [Plasmodium falciparum 3D7]
gi|225631743|emb|CAG25386.2| endonuclease III homologue, putative [Plasmodium falciparum 3D7]
Length = 437
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 119/220 (54%), Gaps = 9/220 (4%)
Query: 4 LEPVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
+ PV G D+ ++ + K RF L+S +LSS TKD+V + +L ++GL T I
Sbjct: 222 IAPVDKYGCDKLSEKTNDMKVFRFQTLISCMLSSRTKDEVTAMVMDKLKKHGL-TVHNIL 280
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
E +K LIY + FY KA + +I I KY+ DIP + +EL LPGIG K+A ++
Sbjct: 281 NTTEEQLKKLIYGIGFYNVKAKQILQICHILKNKYNSDIPHTYEELKKLPGIGEKIAQLI 340
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ +GI VD HVHRI NRL WV + + T+ L+ ++ KE W IN
Sbjct: 341 LQTALNKHEGIAVDIHVHRIANRLNWVN-------SKNELDTQMKLKSYVQKELWSEINH 393
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKS 222
+LVGFGQ IC +P C CT++ C S+ +KS
Sbjct: 394 VLVGFGQVICKGKKPLCEKCTLTNKCQYYQDTSTKQENKS 433
>gi|254573634|ref|XP_002493926.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in
base excision repair [Komagataella pastoris GS115]
gi|238033725|emb|CAY71747.1| DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in
base excision repair [Komagataella pastoris GS115]
Length = 359
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRL--------LQNGLHTAEAIDKADEATIKDLIYPV 76
R+ +L+S +LSS TKD+V ++ + +NGL +AI + + +LI+ +
Sbjct: 130 RYRLLVSLMLSSQTKDEVNYEVMKSMNDYFKSVGYENGL-CLQAILDVEPTKLDELIHKI 188
Query: 77 AFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVD 136
F+ RK +K A I +++GDIP ++ ++ ALPG+GPKM +++ W GI VD
Sbjct: 189 GFHNRKTVYLKSAAVIVKEQFNGDIPKNIKQITALPGVGPKMGYLLLQDAWGINDGIGVD 248
Query: 137 THVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLR 196
HV R+ N WV T +PEQTR AL++W+P+E W INP+LVGFGQ ICTP
Sbjct: 249 VHVDRLANMWKWVN-------TKTPEQTRLALEKWVPRELWQEINPVLVGFGQVICTPRG 301
Query: 197 PRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLR 231
RC +C+++ + S ++ ES++LR
Sbjct: 302 RRCDVCSLASKKLCNNIDRGIISKSRREKESAALR 336
>gi|429850189|gb|ELA25486.1| DNA repair protein ntg1 [Colletotrichum gloeosporioides Nara gc5]
Length = 440
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 36/231 (15%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLL----------QNGLHTAEAIDKADEATIKD 71
++RRF +L++ +LSS TKD V A++RL+ + GL E I + + +
Sbjct: 161 RDRRFHILIALMLSSQTKDTVNAVAMKRLMTELPPHKEGAEGGL-CLENILAVEPDKLNE 219
Query: 72 LIYPVAFYTRKACN----------------MKKIAKICLTKYDGDIPSSLDELLALPGIG 115
LI+ V F+ K + +K A+I K+DGD+P +++ L +LPG+G
Sbjct: 220 LIWAVGFHNNKTKSVIMSDASLSNVDGIRYIKAAAEILRDKFDGDVPDTIEGLTSLPGVG 279
Query: 116 PKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKE 175
PKM + ++ W +GI VD HVHRI N GW KT+ PE TR ALQ WLPK+
Sbjct: 280 PKMGYLCLSAAWDKTEGIGVDVHVHRITNLWGW-------HKTTQPEGTRMALQSWLPKD 332
Query: 176 EWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSKK 224
+W IN LLVG GQT+C P+ +CG C + C +A ++ T K+++
Sbjct: 333 KWREINWLLVGLGQTVCLPVGRKCGDCQLGLKGLCKAAERKKVTEGRKARE 383
>gi|21227382|ref|NP_633304.1| endonuclease III [Methanosarcina mazei Go1]
gi|20905743|gb|AAM30976.1| Endonuclease III [Methanosarcina mazei Go1]
Length = 205
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+S ++S T+D V A ++L + T E + +A+ I++LI V FY KA
Sbjct: 26 FFALISTVMSHRTRDDVTYPAAKKLFER-FSTPEEMVEANVEDIEELIRDVGFYRVKAGR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I++I L Y+G +P ++ LL LPG+G K AN V+ + + VDTHVHRI NR
Sbjct: 85 IKEISRILLEDYNGKVPDDMETLLKLPGVGRKTANCVLAHAFLKEDALAVDTHVHRISNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T +PE+T L++ LP++ W +N LLV FGQ +C P+ PRCG+C ++
Sbjct: 145 LGRVV-------TKNPEETEMELKKLLPQKYWRHVNILLVKFGQNVCRPISPRCGICILN 197
Query: 206 EYCP 209
+ CP
Sbjct: 198 DICP 201
>gi|222099270|ref|YP_002533838.1| Endonuclease III [Thermotoga neapolitana DSM 4359]
gi|221571660|gb|ACM22472.1| Endonuclease III [Thermotoga neapolitana DSM 4359]
Length = 208
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 116/194 (59%), Gaps = 9/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D+ + A ++L + T E + KA + DLI Y +KA
Sbjct: 23 FRVLISTVLSQRTRDENTERAARKLFE-VYRTPEDLAKAKPEDLYDLIKESGMYRQKAER 81
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ KI+KI + KY G +P +L+ELL LPG+G K AN+V+ +G F + VDTHVHRI NR
Sbjct: 82 IVKISKIIVEKYSGKVPDTLEELLRLPGVGRKTANIVLWVG-FRKPALAVDTHVHRISNR 140
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +PE+T +AL+R LP++ W IN +V FG+ +C P+ P+C C +
Sbjct: 141 LGWV-------KTKTPEETEKALKRLLPEKLWGPINGSMVEFGRNVCRPVNPKCEDCFLK 193
Query: 206 EYCPSAFKESSTSS 219
++C K S
Sbjct: 194 KHCEYYRKRRKDSE 207
>gi|328354254|emb|CCA40651.1| endonuclease III [Komagataella pastoris CBS 7435]
Length = 731
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 16/215 (7%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRL--------LQNGLHTAEAIDKADEATIKDLIYPV 76
R+ +L+S +LSS TKD+V ++ + +NGL +AI + + +LI+ +
Sbjct: 502 RYRLLVSLMLSSQTKDEVNYEVMKSMNDYFKSVGYENGL-CLQAILDVEPTKLDELIHKI 560
Query: 77 AFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVD 136
F+ RK +K A I +++GDIP ++ ++ ALPG+GPKM +++ W GI VD
Sbjct: 561 GFHNRKTVYLKSAAVIVKEQFNGDIPKNIKQITALPGVGPKMGYLLLQDAWGINDGIGVD 620
Query: 137 THVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLR 196
HV R+ N WV T +PEQTR AL++W+P+E W INP+LVGFGQ ICTP
Sbjct: 621 VHVDRLANMWKWVN-------TKTPEQTRLALEKWVPRELWQEINPVLVGFGQVICTPRG 673
Query: 197 PRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLR 231
RC +C+++ + S ++ ES++LR
Sbjct: 674 RRCDVCSLASKKLCNNIDRGIISKSRREKESAALR 708
>gi|344234608|gb|EGV66476.1| DNA glycosylase [Candida tenuis ATCC 10573]
Length = 245
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 116/193 (60%), Gaps = 15/193 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL--------LQNGLHTAEAIDKADEATIKDL 72
P+ RF +L+S +LSS TKD+V D A+++L Q GL + E++ + +
Sbjct: 19 PRTFRFQLLISLMLSSQTKDEVLDDAMRKLNNGLKSRGFQQGL-SLESVMTLSDKELDGY 77
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V F+ RK +K + ++ GDIP+++++++ LPG+GPKM +++ GW G
Sbjct: 78 IGKVGFHNRKTVYIKNACIMLQEQFGGDIPNTIEQIVKLPGVGPKMGYLLLQRGWNISTG 137
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VD H+HR+ GW +KT++P+ TR+ L+ WLP++ W INPLLVGFGQ IC
Sbjct: 138 IGVDVHLHRLAMMWGW------SKKTTNPDMTRKYLEEWLPRKFWAEINPLLVGFGQVIC 191
Query: 193 TPLRPRCGMCTVS 205
TP C +C+++
Sbjct: 192 TPQFQNCDVCSLA 204
>gi|344234607|gb|EGV66475.1| hypothetical protein CANTEDRAFT_128882 [Candida tenuis ATCC 10573]
Length = 276
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 116/193 (60%), Gaps = 15/193 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL--------LQNGLHTAEAIDKADEATIKDL 72
P+ RF +L+S +LSS TKD+V D A+++L Q GL + E++ + +
Sbjct: 50 PRTFRFQLLISLMLSSQTKDEVLDDAMRKLNNGLKSRGFQQGL-SLESVMTLSDKELDGY 108
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I V F+ RK +K + ++ GDIP+++++++ LPG+GPKM +++ GW G
Sbjct: 109 IGKVGFHNRKTVYIKNACIMLQEQFGGDIPNTIEQIVKLPGVGPKMGYLLLQRGWNISTG 168
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VD H+HR+ GW +KT++P+ TR+ L+ WLP++ W INPLLVGFGQ IC
Sbjct: 169 IGVDVHLHRLAMMWGW------SKKTTNPDMTRKYLEEWLPRKFWAEINPLLVGFGQVIC 222
Query: 193 TPLRPRCGMCTVS 205
TP C +C+++
Sbjct: 223 TPQFQNCDVCSLA 235
>gi|242821687|ref|XP_002487731.1| A/G-specific adenine glycosylase/endonuclease III, putative
[Talaromyces stipitatus ATCC 10500]
gi|218712652|gb|EED12077.1| A/G-specific adenine glycosylase/endonuclease III, putative
[Talaromyces stipitatus ATCC 10500]
Length = 443
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 125/244 (51%), Gaps = 44/244 (18%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL-------------------LQNGLHTAEAI 61
PK++RF L++ +LSS TKD V A+QRL ++ + A++I
Sbjct: 187 PKDQRFQTLIALMLSSQTKDTVTAVAMQRLHTELGEGEQPNNPSPSKTLIKKEENDADSI 246
Query: 62 DKADEAT----------------IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSL 105
A E + +LI V F+ K +K++A I KY+ DIP +
Sbjct: 247 KVALEKKPSTLTVQNVLAVSPERLNELIRSVGFHNNKTKYIKQVAIILRDKYESDIPPTP 306
Query: 106 DELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTR 165
+EL+ALPG+GPKMA + M+ W GI VD HVHRI N GW T +PE+TR
Sbjct: 307 EELMALPGVGPKMAYLCMSAAWGKYLGIGVDVHVHRITNLWGW-------HATKTPEETR 359
Query: 166 EALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFKESSTSSSKSK 223
ALQ WLP+++W IN LL+G GQT C P+ RCG C + + C S K + +
Sbjct: 360 IALQLWLPRDKWHEINKLLIGLGQTACLPVGRRCGECDLAGTGLCKSEIKGLVAKTKREV 419
Query: 224 KSES 227
K E+
Sbjct: 420 KEEA 423
>gi|268323381|emb|CBH36969.1| putative endonuclease [uncultured archaeon]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/183 (44%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ L+S LLS TKD+V A +RL A+ + E I+ IYPV FY RKA
Sbjct: 31 YLTLISCLLSLRTKDEVTARASKRLFALAKTPADMLQHKKE-DIERAIYPVGFYRRKAEQ 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ I+ + YD +P+ +ELL L G+G K AN+V+T+ +N GI VDTHVHRI NR
Sbjct: 90 ILAISHTLVANYDSKVPAEREELLKLKGVGRKTANIVITMA-YNKPGIAVDTHVHRISNR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T P QT ALQ+ L K+ W +N LLV GQTICTP+ P+C +C ++
Sbjct: 149 LGLVA-------TKDPYQTELALQKALAKQHWKVLNELLVLHGQTICTPISPKCSICPIT 201
Query: 206 EYC 208
+YC
Sbjct: 202 KYC 204
>gi|342887581|gb|EGU87063.1| hypothetical protein FOXB_02457 [Fusarium oxysporum Fo5176]
Length = 399
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 26/232 (11%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKAD 65
D + PK++RF L++ +LSS TKD V ++R+ GL+ I D
Sbjct: 154 DRNASPKDQRFHTLVALMLSSQTKDTVNAVVMKRMQTELPPFEPGAPPGLNLNN-ILAID 212
Query: 66 EATIKDLIYPVAFYTRKAC----NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+ + I+ V F+ K +K+ A+I K+DGDIP++++ L++LPG+GPKMA +
Sbjct: 213 PKLLNEFIWAVGFHNNKTKFVTRYIKQTAEILRDKWDGDIPNTIEGLVSLPGVGPKMAYL 272
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
M++ W GI VD HVHRI N GW KT +PE+TR LQ WLP++ W IN
Sbjct: 273 CMSVAWGKHLGIGVDVHVHRITNLWGW-------HKTKNPEETRTTLQSWLPQDRWHEIN 325
Query: 182 PLLVGFGQTICTPLRPRCGMCTVS--EYCPSA--FKESSTSSSKSKKSESSS 229
LLVG GQ++C P+ +CG C + C +A K S+ K++K ES +
Sbjct: 326 HLLVGLGQSVCLPVGRKCGECDLGLEGLCKAADRAKVSAGRQLKAEKMESEA 377
>gi|217076701|ref|YP_002334417.1| nth endonuclease III [Thermosipho africanus TCF52B]
gi|217036554|gb|ACJ75076.1| nth endonuclease III [Thermosipho africanus TCF52B]
Length = 203
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS +KD+ + A + L N T + KA E I +LI P Y +KA
Sbjct: 24 FKVLITTVLSQRSKDENTEIAAENLF-NKYKTPFELSKAKEEDIYELIKPAGLYRQKAKR 82
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I+KI + KY G +P SL+ELL LPG+G K AN+V+ + F+ + VDTHVHRI NR
Sbjct: 83 IIEISKIIVEKYSGIVPDSLEELLKLPGVGRKTANIVLYVS-FSKSALAVDTHVHRISNR 141
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV T +PE+T L LPK W IN +V FG+ +C P+ P C +C +S
Sbjct: 142 LGWVN-------TKTPEETEFKLMEILPKNLWGPINGSMVEFGKKVCKPVSPNCKICPIS 194
Query: 206 EYC 208
+YC
Sbjct: 195 KYC 197
>gi|317149841|ref|XP_001823231.2| hypothetical protein AOR_1_1642114 [Aspergillus oryzae RIB40]
Length = 886
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 125/232 (53%), Gaps = 39/232 (16%)
Query: 6 PVYSLGVDETD-SSLPPKERRFAVLLSALLSSLTKDKVADGALQRL---LQNG----LHT 57
PV ++G E + P++RRF L++ +LSS TKD V A+QRL L +G + T
Sbjct: 160 PVDTMGCAELYWRASSPRDRRFQTLVALMLSSQTKDTVTAVAMQRLHTELGDGEAPLIET 219
Query: 58 AEAIDKADEATIK------------------------DLIYPVAFYTRKACNMKKIAKIC 93
+ ++ DE T K +LI V F+ K +K A I
Sbjct: 220 SMIKEEPDEDTFKLEKPLRDSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAIIL 279
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+Y DIPS+ +EL+ LPG+G KMA + M+ W +GI VD HVHRI N GW
Sbjct: 280 RDQYQSDIPSTAEELMKLPGVGLKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGW----- 334
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
KT +PE TR+AL+ WLPK++W IN LLVG GQT+C P+ +CG C ++
Sbjct: 335 --NKTKTPEDTRKALESWLPKDKWHEINKLLVGLGQTVCLPVGRKCGDCDLA 384
>gi|261403295|ref|YP_003247519.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
vulcanius M7]
gi|261370288|gb|ACX73037.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
vulcanius M7]
Length = 346
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 123/191 (64%), Gaps = 13/191 (6%)
Query: 22 KERR-FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
KER F VL+S ++S+ TKD++ + ++L + + + + K DE + +LIYP FY
Sbjct: 24 KERDPFKVLVSTVISARTKDEITEEVSKKLFKE-VKNVDDLLKIDEEKLANLIYPAGFYK 82
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N+KK+AKI +Y G +P+SL++LL LPG+G K AN+V+TL F+ GICVDTHVH
Sbjct: 83 NKAKNLKKMAKILKEEYGGKVPNSLEDLLKLPGVGRKTANLVLTLA-FDKDGICVDTHVH 141
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RICNR W T +PE+T L++ LPK+ W IN LLV FG+ IC+P +P+C
Sbjct: 142 RICNR--WEIVE-----TETPEETEFELRKKLPKKYWKVINNLLVVFGKEICSP-KPKCE 193
Query: 201 MC--TVSEYCP 209
C + + CP
Sbjct: 194 KCFYEIRDKCP 204
>gi|150864007|ref|XP_001382677.2| Endonuclease III [Scheffersomyces stipitis CBS 6054]
gi|149385263|gb|ABN64648.2| Endonuclease III [Scheffersomyces stipitis CBS 6054]
Length = 382
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 119/214 (55%), Gaps = 19/214 (8%)
Query: 6 PVYSLGVDETDSSLPPKER-------RFAVLLSALLSSLTKDKVADGALQR----LLQNG 54
PV + G + +S+ P R RF +L+S +LSS TKD+V A++ LL NG
Sbjct: 134 PVDTQGCERMPNSINPNVRTRNPRIYRFQLLISLMLSSQTKDEVNYLAMKTMHEGLLANG 193
Query: 55 LHTA---EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLAL 111
EA+ + E + D I V F+ RKA +K+ ++ + DIPS++++++ L
Sbjct: 194 YKDGLCIEALLELTEKELDDYICKVGFHNRKAGYIKRACEMLRDNFQSDIPSTIEDVVTL 253
Query: 112 PGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRW 171
PG+GPKM +++ W GI VD H+HR+ W T + +PE TR L+ W
Sbjct: 254 PGVGPKMGYLLLQNAWGINSGIGVDVHLHRLAQMWSW-----TSKNAKTPEHTRVELEDW 308
Query: 172 LPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LP + W INPLLVGFGQTIC P P C +CT++
Sbjct: 309 LPPKYWADINPLLVGFGQTICVPRAPNCDICTLA 342
>gi|419759441|ref|ZP_14285740.1| endonuclease III [Thermosipho africanus H17ap60334]
gi|407515451|gb|EKF50196.1| endonuclease III [Thermosipho africanus H17ap60334]
Length = 203
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS +KD+ + A + L N T + KA E I +LI P Y +KA
Sbjct: 24 FKVLITTVLSQRSKDENTEIAAENLF-NKYKTPLELSKAKEEDIYELIKPAGLYRQKAKR 82
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I+KI + KY G +P SL+ELL LPG+G K AN+V+ + F+ + VDTHVHRI NR
Sbjct: 83 IIEISKIIVEKYSGIVPDSLEELLKLPGVGRKTANIVLYVS-FSKPALAVDTHVHRISNR 141
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV T +PE+T L LPK W IN +V FG+ +C P+ P C +C +S
Sbjct: 142 LGWVN-------TKTPEETEFKLMEILPKNLWGPINGSMVEFGKKVCKPVSPNCKICPIS 194
Query: 206 EYC 208
+YC
Sbjct: 195 KYC 197
>gi|218960389|ref|YP_001740164.1| putative endonuclease III (nth-like) [Candidatus Cloacamonas
acidaminovorans]
gi|167729046|emb|CAO79957.1| putative endonuclease III (nth-like) [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 222
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 9/201 (4%)
Query: 8 YSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEA 67
YS+ D E F VL++ +LS+ TKD+ +++L + E ++K A
Sbjct: 26 YSVKTPVVDLIQIKTEDPFKVLVATILSARTKDETTAKVVEKLFPK-VQKIEDLEKIPLA 84
Query: 68 TIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW 127
+ LI PV F+ KA ++K++ K+ K++G IP +D+LL LPG+G K AN+V +
Sbjct: 85 ELDALITPVGFHRVKAKHLKELPKVLKEKFNGKIPEEIDDLLELPGVGRKTANLVRAVA- 143
Query: 128 FNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGF 187
F ICVD HVHRICNR G++ +T +P +T L++ LP++ W+ N LV F
Sbjct: 144 FQKPAICVDVHVHRICNRWGYI-------QTKTPLETEMTLRQKLPEKYWLNFNSYLVAF 196
Query: 188 GQTICTPLRPRCGMCTVSEYC 208
GQ +CTP +P+C +C V+E+C
Sbjct: 197 GQNLCTPRKPKCEICPVAEFC 217
>gi|58269828|ref|XP_572070.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113763|ref|XP_774466.1| hypothetical protein CNBG1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257104|gb|EAL19819.1| hypothetical protein CNBG1120 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228306|gb|AAW44763.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 452
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 132/243 (54%), Gaps = 27/243 (11%)
Query: 6 PVYSLGVDE--TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
PV +G + T++ PK RF +L+S +LSS TKD V A+ LHT+
Sbjct: 138 PVDDMGCERPRTNTEGDPKTFRFHILISLMLSSQTKDAVTSAAV-----TSLHTSLPGGL 192
Query: 64 ADEA-------TIKDLIYPVAFYTRKACNMKKIAKICLTKY---DGDIPSSLDELLALPG 113
+ + TI++ I V F+ RKA +++ AK L + GD+P +++ L L G
Sbjct: 193 SAASLAAAPLETIQECINKVGFWRRKAEYIQEAAKTLLEQEGDEKGDVPKTVEGLCKLKG 252
Query: 114 IGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLP 173
+GPKMA + + W GI VD HVHRI NRL W P TS+PEQTR LQ WLP
Sbjct: 253 VGPKMAFLALQCAWDINAGIGVDVHVHRITNRLKWHRPP-----TSTPEQTRLNLQSWLP 307
Query: 174 KEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSKKSESSSLR 231
INPL+VGFGQ IC P+ PRC +C + E CPS K +++K +K + S +
Sbjct: 308 PHLHKPINPLMVGFGQVICLPVGPRCDICLLGQKEICPSRVK---GANAKGRKEVTYSFK 364
Query: 232 KLE 234
+ E
Sbjct: 365 EEE 367
>gi|363749897|ref|XP_003645166.1| hypothetical protein Ecym_2637 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888799|gb|AET38349.1| Hypothetical protein Ecym_2637 [Eremothecium cymbalariae
DBVPG#7215]
Length = 364
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 116/199 (58%), Gaps = 12/199 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLHTAEAID-----KADEATIKDL 72
PK R +L+S +LSS TKD+ A+ L++ + L+ + I + +E + L
Sbjct: 128 PKNYRLQLLVSLMLSSQTKDETNAQAMYNLMEYCVDKLNIKQGITLNSLLEIEEKQLDAL 187
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
IY V F+ +K+ +K++A++ L +++ D+P+++ L +LPG+GPKM + + W + G
Sbjct: 188 IYSVGFHKKKSGYIKRMAQMLLDEFEQDVPTTITGLSSLPGVGPKMGYLALQKAWGIIGG 247
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VD HV R+C WV K +PE TR+AL+ WLP E W INP+LVGFGQ IC
Sbjct: 248 IGVDVHVDRLCKMWKWVDP----NKCKTPEHTRKALESWLPHELWNEINPVLVGFGQVIC 303
Query: 193 TPLRPRCGMCTVSEYCPSA 211
RC +C ++ C SA
Sbjct: 304 PARGKRCDLCLANKVCKSA 322
>gi|340623929|ref|YP_004742382.1| endonuclease III-like protein [Methanococcus maripaludis X1]
gi|339904197|gb|AEK19639.1| endonuclease III-like protein [Methanococcus maripaludis X1]
Length = 356
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 14/201 (6%)
Query: 12 VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID-KADEATIK 70
VD+ + ER F +L+S ++S+ TKD+ + L + + + + DE ++
Sbjct: 25 VDKISKNSDKNERAFKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQIPIDE--LE 82
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
L++P FY KA N+KK+ +I + KY+ DIP+S+++L+ LPG+G K AN+VMTL F+
Sbjct: 83 KLVHPAGFYKTKAKNLKKLGEILIDKYNSDIPNSIEDLVTLPGVGRKTANLVMTLA-FDD 141
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
ICVDTHVHRI NR + T SPE T L++ LPK W +IN LLV FGQ
Sbjct: 142 YAICVDTHVHRITNRWDYAD-------TESPENTEMELRKKLPKNYWKKINNLLVVFGQE 194
Query: 191 ICTPLRPRCGMC--TVSEYCP 209
C+P+ P+C C + + CP
Sbjct: 195 TCSPI-PKCDRCFSEIKKICP 214
>gi|404496830|ref|YP_006720936.1| endonuclease III-like DNA glycosidase [Geobacter metallireducens
GS-15]
gi|418065220|ref|ZP_12702594.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter
metallireducens RCH3]
gi|78194435|gb|ABB32202.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter metallireducens GS-15]
gi|373562398|gb|EHP88609.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter
metallireducens RCH3]
Length = 218
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D+ A +RL A+ + + +A I+ IYPV FY KA
Sbjct: 36 FKVLVSCILSLRTQDRTTGPASERLFGLADTPAKMLFLSSDA-IEQAIYPVGFYRNKAAQ 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ I + + KYDG +P LDELL G+G K AN+V+TLG F ICVDTHVHRICNR
Sbjct: 95 ILDICRTLVDKYDGQVPDDLDELLTFRGVGRKTANLVLTLG-FGKLAICVDTHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+ + T +P +T AL+ LP++ W IN LV FGQ CTP+ PRC C +
Sbjct: 154 WGYTS-------TKTPAETEFALRAKLPQKYWPVINDYLVTFGQNQCTPVSPRCSTCVLV 206
Query: 206 EYC 208
+C
Sbjct: 207 CFC 209
>gi|46137371|ref|XP_390377.1| hypothetical protein FG10201.1 [Gibberella zeae PH-1]
Length = 465
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 122/225 (54%), Gaps = 22/225 (9%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA----------IDKAD 65
D PK++RF L++ +LSS TKD V + + R LQ L E + D
Sbjct: 220 DEKASPKDQRFHTLVALMLSSQTKDTV-NAVVMRKLQTELPPFEPGAPPGLNLNNVLAID 278
Query: 66 EATIKDLIYPVAFYTRKACNM--KKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
T+ + I+ V F+ K + A+I ++DGDIP +++ L++LPG+GPKM + +
Sbjct: 279 PKTLNEFIWAVGFHNNKTKFVLPPSTAEILRDQWDGDIPDTIEGLVSLPGVGPKMGYLCL 338
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
++ W +GI VD HVHRI N GW KT +PE+TR LQ WLP++ W IN L
Sbjct: 339 SVAWGKHEGIGVDVHVHRITNLWGW-------HKTKNPEETRTTLQSWLPQDRWHEINHL 391
Query: 184 LVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSKSKKSE 226
LVG GQ++C P+ +CG C + C +A + ++ K K E
Sbjct: 392 LVGLGQSVCLPVGRKCGECDLGLQGLCKAADRAKVSAGRKLKTEE 436
>gi|440634594|gb|ELR04513.1| hypothetical protein GMDG_06808 [Geomyces destructans 20631-21]
Length = 485
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 111/197 (56%), Gaps = 17/197 (8%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATIK 70
P+++RF L+S ++SS TKD +Q+L + GL+ E I +
Sbjct: 183 PRDQRFQTLVSLMMSSQTKDTTNYVVMQKLYKELPAATPGGRPGLNL-ENILAVPAERLN 241
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+ K +K A+I + GDIP + + L+ALPG+GPKMA + ++ W V
Sbjct: 242 ELIWAVGFHNNKTRYIKGAAEILRDAHGGDIPDTAEGLMALPGVGPKMAYLCLSAAWGRV 301
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GI VD HVHRI N GW + GTK PE+TR L+ W+P+ W IN LLVGFGQT
Sbjct: 302 EGIGVDVHVHRITNLWGWHGRGGTK----GPEETRGRLEGWVPRGRWAEINWLLVGFGQT 357
Query: 191 ICTPLRP--RCGMCTVS 205
+C R RCG C V
Sbjct: 358 VCMSERGRRRCGECEVG 374
>gi|289548443|ref|YP_003473431.1| DNA-(apurinic or apyrimidinic site) lyase [Thermocrinis albus DSM
14484]
gi|289182060|gb|ADC89304.1| DNA-(apurinic or apyrimidinic site) lyase [Thermocrinis albus DSM
14484]
Length = 219
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 114/194 (58%), Gaps = 10/194 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ ALLS+ TKD+V +L + + + + E + LIYPV FY KA
Sbjct: 36 FRVLVCALLSTRTKDEVTAQVCSKLFSR-IRSIDDLINIPEEELASLIYPVGFYRNKAKF 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++A+ ++ G +P +++LL L G+G K+AN+V+ G FN ICVDTHVHRI NR
Sbjct: 95 LKRLAEELKKEFAGKVPDRIEDLLKLKGVGRKVANLVLADG-FNKPAICVDTHVHRITNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
V KT +P QT +AL LP E W N LLV FGQTIC P++P C C +
Sbjct: 154 WSLV-------KTKTPYQTEKALMEVLPIEYWQEFNRLLVAFGQTICRPVKPLCHKCPIR 206
Query: 206 EYCPSAFKESSTSS 219
+YC FK++S S+
Sbjct: 207 DYC-DFFKKTSGSA 219
>gi|451947339|ref|YP_007467934.1| exodeoxyribonuclease III [Desulfocapsa sulfexigens DSM 10523]
gi|451906687|gb|AGF78281.1| exodeoxyribonuclease III [Desulfocapsa sulfexigens DSM 10523]
Length = 478
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS+ TKD+V A +RL + G T E + K D AT++ +I+PV FY KA
Sbjct: 33 FKVLVATILSARTKDEVTAEASERLFKQG-GTVEDLAKIDVATLEKIIFPVGFYKNKAKY 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + + +P++++ LL LPG+G K AN+V+ F + ICVDTHVHRI N
Sbjct: 92 LAALPDKLAADFGSKVPNTMEGLLTLPGVGRKTANLVLAQA-FGIPAICVDTHVHRIMNI 150
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T +PEQT AL++ LP++ W+ +N LLV FGQ C P+ P C C ++
Sbjct: 151 WGYV-------ETKTPEQTEMALRKKLPEKYWILVNSLLVAFGQGTCRPVGPHCDRCVLA 203
Query: 206 EYC 208
E C
Sbjct: 204 ESC 206
>gi|6319304|ref|NP_009387.1| bifunctional N-glycosylase/AP lyase NTG1 [Saccharomyces cerevisiae
S288c]
gi|401436|sp|P31378.1|NTG1_YEAST RecName: Full=Mitochondrial DNA base excision repair N-glycosylase
1; Flags: Precursor
gi|171860|gb|AAC04942.1| Ntg1p: endonuclease III-like glycosylase 1 [Saccharomyces
cerevisiae]
gi|207347995|gb|EDZ73989.1| YAL015Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272284|gb|EEU07269.1| Ntg1p [Saccharomyces cerevisiae JAY291]
gi|259144698|emb|CAY77639.1| Ntg1p [Saccharomyces cerevisiae EC1118]
gi|285810187|tpg|DAA06973.1| TPA: bifunctional N-glycosylase/AP lyase NTG1 [Saccharomyces
cerevisiae S288c]
gi|323334796|gb|EGA76168.1| Ntg1p [Saccharomyces cerevisiae AWRI796]
gi|323338890|gb|EGA80104.1| Ntg1p [Saccharomyces cerevisiae Vin13]
gi|392301261|gb|EIW12349.1| Ntg1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 399
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 12/181 (6%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIK 70
+ P++ R VLL +LSS TKD+V A+ +++ + LH T EA+ + +E +
Sbjct: 137 ISPRDYRLQVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLD 196
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+TRKA + KI ++ D+P++++ELL LPG+GPKMA + + W +
Sbjct: 197 ELIHSVGFHTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKI 256
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GICVD HV R+ WV QK +P+QTR LQ WLPK W IN LLVGFGQ
Sbjct: 257 EGICVDVHVDRLTKLWKWV----DAQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQI 312
Query: 191 I 191
I
Sbjct: 313 I 313
>gi|405121665|gb|AFR96433.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans
var. grubii H99]
Length = 452
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 124/230 (53%), Gaps = 24/230 (10%)
Query: 6 PVYSLGVDE--TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
PV +G + T++ PK RF +L+S +LSS TKD V A+ LH++
Sbjct: 138 PVDDMGCERPRTNTEGDPKTFRFHILISLMLSSQTKDAVTSAAV-----TALHSSLPGGL 192
Query: 64 ADEA-------TIKDLIYPVAFYTRKACNMKKIAKICLTKY---DGDIPSSLDELLALPG 113
+ + TI++ I V F+ RKA +++ AK L + GD+P +++ L L G
Sbjct: 193 SAASLAAAPLETIQECINKVGFWRRKAEYIQEAAKTLLEQEGDEKGDVPKTVEGLCKLKG 252
Query: 114 IGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLP 173
+GPKMA + + W GI VD HVHRI NRL W P TS+PEQTR LQ WLP
Sbjct: 253 VGPKMAFLALQCAWDINAGIGVDVHVHRITNRLKWHRPP-----TSTPEQTRLNLQSWLP 307
Query: 174 KEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESSTSSSK 221
INPLLVGFGQ IC P+ PRC +C + E CPS K ++ K
Sbjct: 308 PHLHKPINPLLVGFGQVICLPVGPRCDICLLGQKEICPSRVKGTTAKGRK 357
>gi|365767221|gb|EHN08706.1| Ntg1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 399
Score = 146 bits (369), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 12/181 (6%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIK 70
+ P++ R VLL +LSS TKD+V A+ +++ + LH T EA+ + +E +
Sbjct: 137 ISPRDYRLQVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLD 196
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+TRKA + KI ++ D+P++++ELL LPG+GPKMA + + W +
Sbjct: 197 ELIHSVGFHTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKI 256
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GICVD HV R+ WV QK +P+QTR LQ WLPK W IN LLVGFGQ
Sbjct: 257 EGICVDVHVDRLTKLWKWV----DAQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQI 312
Query: 191 I 191
I
Sbjct: 313 I 313
>gi|151941378|gb|EDN59749.1| DNA glycosylase [Saccharomyces cerevisiae YJM789]
gi|349576238|dbj|GAA21410.1| K7_Ntg1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 399
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 109/181 (60%), Gaps = 12/181 (6%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIK 70
+ P++ R VLL +LSS TKD+V A+ +++ + LH T EA+ + +E +
Sbjct: 137 ISPRDYRLQVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLD 196
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+TRKA + KI ++ D+P++++ELL LPG+GPKMA + + W +
Sbjct: 197 ELIHSVGFHTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKI 256
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GICVD HV R+ WV QK +P+QTR LQ WLPK W IN LLVGFGQ
Sbjct: 257 EGICVDVHVDRLTKLWKWV----DPQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQI 312
Query: 191 I 191
I
Sbjct: 313 I 313
>gi|354546368|emb|CCE43098.1| hypothetical protein CPAR2_207410 [Candida parapsilosis]
Length = 361
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 111/192 (57%), Gaps = 13/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTA-------EAIDKADEATIKDLI 73
PK RF +L+S +LSS TKD+V A+ L GL EA+ + I I
Sbjct: 136 PKRYRFQLLISLMLSSQTKDEVNYDAMVNL-NTGLGNKHAQGFCLEAMSQLSPPEIDSYI 194
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V F+ RKA + K +I +++DGDIP +++E++ LPG+GPKM +++ GW GI
Sbjct: 195 CKVGFHNRKAQYIAKTCQILKSEFDGDIPKTIEEIVKLPGVGPKMGYLLLQAGWGINSGI 254
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VD H+HR+ GWV+ +K ++PE+ R L+ W+PK+ W INPL+VGFGQ +C
Sbjct: 255 GVDVHLHRLALLWGWVS-----KKATTPEKCRLELESWIPKKYWSDINPLIVGFGQVVCV 309
Query: 194 PLRPRCGMCTVS 205
P C +C +
Sbjct: 310 PRASNCDICALG 321
>gi|221058032|ref|XP_002261524.1| endonuclease iii homologue [Plasmodium knowlesi strain H]
gi|194247529|emb|CAQ40929.1| endonuclease iii homologue, putative [Plasmodium knowlesi strain H]
Length = 396
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Query: 15 TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIY 74
+D + K RF L+S +LS+ T+D+ A++RL ++GL T + K E +K LI
Sbjct: 195 SDKTESAKVYRFQTLVSCMLSTRTRDESTAMAMERLKKHGL-TVHNMLKTSEEELKKLIQ 253
Query: 75 PVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGIC 134
V FY KA + +I++I KYD DIP +L+ LL LPGIG K+A++++ +GI
Sbjct: 254 TVGFYKIKAKQIIQISQILRDKYDYDIPHTLEGLLELPGIGQKVAHLILQTALDTHEGIA 313
Query: 135 VDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTP 194
VD HVHRI NRL WV T + T+ L+ ++P+ W +N LVGFGQ +C
Sbjct: 314 VDIHVHRISNRLNWVC-------TKNESITQSKLESYVPRALWSELNKTLVGFGQVVCKA 366
Query: 195 LRPRCGMCTVSEYC 208
P C MC V+ C
Sbjct: 367 KSPHCTMCAVTNCC 380
>gi|84489308|ref|YP_447540.1| endonuclease III [Methanosphaera stadtmanae DSM 3091]
gi|84372627|gb|ABC56897.1| putative endonuclease III [Methanosphaera stadtmanae DSM 3091]
Length = 219
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+ +LS T+D+ D A + L N HT E I A I +L+ FY KA
Sbjct: 37 YEVLIRTILSQRTRDENTDKATENLF-NVYHTMEEIADAPVDDIANLVRQAGFYNVKAAR 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+++ I L +YDG +P +L+ELL LPG+G K AN V+ G F I VD HVHRI NR
Sbjct: 96 IKEVSNILLEEYDGVVPDTLEELLKLPGVGRKTANCVLVFG-FQKDAIPVDVHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T PE T E L+ +P+E W+ IN L+V FGQ IC P+ P+ C +
Sbjct: 155 LGLV-------HTDKPEDTEEVLREIVPQEYWLPINDLMVQFGQNICKPINPQHIECPFT 207
Query: 206 EYC 208
+ C
Sbjct: 208 DLC 210
>gi|392573095|gb|EIW66237.1| hypothetical protein TREMEDRAFT_23302, partial [Tremella
mesenterica DSM 1558]
Length = 237
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 113/198 (57%), Gaps = 14/198 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL---LQNGLHTAEAIDKADEATIKDLIYPVA 77
PK RF +L+S +LSS TKD V A+ L L GL T A+D A T+ I V
Sbjct: 46 PKTLRFHILISLMLSSQTKDPVTAQAVSNLHSTLPGGL-TPAALDSASPDTVSQCINKVG 104
Query: 78 FYTRKACNMKKIAKICLT---KYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGIC 134
F+ RK ++ AK + GD+P +L+ L L G+GPKMA + + W GI
Sbjct: 105 FWRRKTEYIQAAAKRLMEFPGDEKGDVPKTLEGLCELKGVGPKMAFLCLQAAWDINAGIG 164
Query: 135 VDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTP 194
VD HVHRI NRL W K +T++PEQTR LQ WLP E INP+LVGFGQ IC P
Sbjct: 165 VDVHVHRITNRLRW-----HKPQTTTPEQTRLNLQSWLPMEYHRPINPMLVGFGQIICLP 219
Query: 195 LRPRCGMCTVS--EYCPS 210
+ PRC +C ++ + CPS
Sbjct: 220 VGPRCDICLLAKEKLCPS 237
>gi|150400428|ref|YP_001324195.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
gi|150013131|gb|ABR55583.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus vannielii
SB]
Length = 356
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 119/203 (58%), Gaps = 18/203 (8%)
Query: 12 VDETDSSLPPKERRFAVLLSALLSSLTKDKV---ADGALQRLLQNGLHTAEAIDKADEAT 68
VD+ + +ER F +L+S LS+ TKD+ L R++QN E +
Sbjct: 25 VDQISKNSTFEERAFKILVSTSLSARTKDETTAKVSKNLFRVIQN----PEDLLNIPINE 80
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
++ L+YP FY K+ N+K++ KI + KY+ IP+S+DEL+ LPG+G K AN+VMTL F
Sbjct: 81 LEKLVYPAGFYKTKSKNLKELGKILVEKYNSKIPNSIDELVKLPGVGRKTANLVMTLA-F 139
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
+ ICVDTHVHRI NRL +V T +P +T AL++ LPK+ W +IN LV FG
Sbjct: 140 SEDAICVDTHVHRITNRLNYVD-------TKNPNETEMALRKKLPKKYWKQINNSLVIFG 192
Query: 189 QTICTPLRPRCGMC--TVSEYCP 209
Q IC P+C C + + CP
Sbjct: 193 QDICG-FVPKCSSCFPEIKKICP 214
>gi|365762207|gb|EHN03808.1| Ntg1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 390
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 12/181 (6%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIK 70
+ P++ R VLL +LSS TKD+V A+ +++ + LH T EA+ + E+ +
Sbjct: 128 ISPRDYRLQVLLGVMLSSQTKDEVTAMAMYNIMRYCMDELHVEQGMTLEAVLQISESKLD 187
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+TRKA + +I ++ GD+P++++ELLALPG+GPKMA + + W +
Sbjct: 188 ELIHSVGFHTRKAKYLLSTCQILQDRHLGDVPATINELLALPGVGPKMAYLTLQKAWGKI 247
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
+GICVD HV R+ WV QK +P+QTR LQ WLP+ W IN LLVGFGQ
Sbjct: 248 EGICVDVHVDRLTKIWKWV----DPQKCKNPDQTRIQLQNWLPRGLWTEINGLLVGFGQI 303
Query: 191 I 191
I
Sbjct: 304 I 304
>gi|45358100|ref|NP_987657.1| endonuclease III-like protein [Methanococcus maripaludis S2]
gi|44920857|emb|CAF30093.1| endonuclease III homologue [Methanococcus maripaludis S2]
Length = 356
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 119/201 (59%), Gaps = 14/201 (6%)
Query: 12 VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID-KADEATIK 70
VD+ + ER F +L+S ++S+ TKD+ + L + + + + DE ++
Sbjct: 25 VDKISKNSDKNERAFKILISTVISARTKDETTAKVSKELFKKVKNPKDLVQIPIDE--LE 82
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
L++P FY KA N+KK+ +I + KY+ ++P+S++EL+ LPG+G K AN+VMTL F+
Sbjct: 83 KLVHPAGFYKTKAKNLKKLGEILIDKYNSNVPNSIEELVTLPGVGRKTANLVMTLA-FDD 141
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
ICVDTHVHRI NR + T SPE T L++ LPK W +IN LLV FGQ
Sbjct: 142 YAICVDTHVHRITNRWYYAD-------TESPENTEMDLRKKLPKNYWKKINNLLVVFGQE 194
Query: 191 ICTPLRPRCGMC--TVSEYCP 209
C+P+ P+C C + + CP
Sbjct: 195 TCSPI-PKCDKCFSEIKKICP 214
>gi|336324330|ref|YP_004604297.1| DNA-(apurinic or apyrimidinic site) lyase [Flexistipes sinusarabici
DSM 4947]
gi|336107911|gb|AEI15729.1| DNA-(apurinic or apyrimidinic site) lyase [Flexistipes sinusarabici
DSM 4947]
Length = 227
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 18/214 (8%)
Query: 4 LEPVYSLGVDETDSSLPP---------KERRFAVLLSALLSSLTKDKVADGALQRLLQNG 54
++ YSL D S PP K+ F VL+S ++S TKD V A + L +
Sbjct: 6 IDEFYSLLEDYYFSQRPPSVTQISDRCKKDPFRVLISTIISLRTKDSVTLKASESLFELA 65
Query: 55 LHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGI 114
+ ++ +++ I + IYP FY RKA +K I K + ++DG +P+ LD+LL+L G+
Sbjct: 66 AEPVKMMNLSEDEII-NAIYPAGFYRRKAVTIKDICKDIVERFDGKVPADLDKLLSLKGV 124
Query: 115 GPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
G K AN+V+ G F + +CVDTHVHRICNR G+V KT +P++T L+ LP
Sbjct: 125 GRKTANLVLVEG-FEMDAVCVDTHVHRICNRAGFV-------KTKTPDETEMRLREILPV 176
Query: 175 EEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ W + N +LV +GQ +C P P C C + C
Sbjct: 177 KYWKKWNEMLVSYGQKVCKPRGPTCSSCKLFHLC 210
>gi|313672585|ref|YP_004050696.1| DNA-(apurinic or apyrimidinic site) lyase [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939341|gb|ADR18533.1| DNA-(apurinic or apyrimidinic site) lyase [Calditerrivibrio
nitroreducens DSM 19672]
Length = 218
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 9/187 (4%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K FAVL+S L+S TKD+V A +RL + + + K ++ LIYP FY +
Sbjct: 32 KSNPFAVLISTLISLRTKDEVTLKASERLFSRADNPFDML-KLSTDEVERLIYPAGFYRK 90
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
K+ + I+K + Y G +P+SLDELL + G+G K AN+V+ G F V +CVDTHVHR
Sbjct: 91 KSLLILDISKYLVENYQGRVPNSLDELLKIKGVGRKTANLVLVEG-FGVPAVCVDTHVHR 149
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I NR+G V T +P++T L+ LP + W++ N LV +GQ +C P+ P C
Sbjct: 150 IMNRMGLVN-------TKNPDETEMVLRDKLPVKYWIKWNEYLVAYGQNVCKPISPLCST 202
Query: 202 CTVSEYC 208
C +S++C
Sbjct: 203 CKLSDFC 209
>gi|346970075|gb|EGY13527.1| DNA base excision repair N-glycosylase [Verticillium dahliae
VdLs.17]
Length = 286
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 113/198 (57%), Gaps = 22/198 (11%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQN----------GLHTAEAIDKADEATIKD 71
++RRF +L+S ++SS TKD V A+ RL GL+ E I + A + +
Sbjct: 28 RDRRFQILISLMMSSQTKDTVNAVAMGRLHDELPPHEAGAPPGLNL-ENILAVEPAKLNE 86
Query: 72 LIYPVAFYTRKACN--MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFN 129
LI V F+ K +K+ A + +D DIP ++D L +LPG+GPKMA++ ++ W
Sbjct: 87 LIRVVGFHNNKTNPRFIKQAALLLRDNFDADIPPTIDGLTSLPGVGPKMAHLCLSAAWGR 146
Query: 130 VQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
+GI VD HVHRI N GW KT+SPE +R AL+ WLP++ W IN LLVG GQ
Sbjct: 147 TEGIGVDVHVHRITNMWGW-------HKTASPEASRLALEAWLPRDRWHEINTLLVGLGQ 199
Query: 190 TICTPL--RPRCGMCTVS 205
T+C P R RCG C +
Sbjct: 200 TVCPPQAGRRRCGECDLG 217
>gi|150020336|ref|YP_001305690.1| endonuclease III [Thermosipho melanesiensis BI429]
gi|149792857|gb|ABR30305.1| endonuclease III [Thermosipho melanesiensis BI429]
Length = 203
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS +KD+ + A RL + T + + KA E + +LI P Y +KA
Sbjct: 24 FKVLITTVLSQRSKDENTEIAANRLFEK-YPTPQTLLKAKEEDLYELIKPAGLYRQKAKR 82
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I+KI + K+ G +P +L+ELL LPG+G K AN+V+ + F+ + VDTHVHRI NR
Sbjct: 83 IIEISKIIVNKFSGKVPDTLEELLTLPGVGRKTANIVLYVS-FSKPALAVDTHVHRISNR 141
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW KT +P +T AL + LPK+ W IN +V FG+ +C P P+C +C +
Sbjct: 142 LGWC-------KTKNPNETEFALMKLLPKDLWGPINGSMVKFGKNVCLPRNPKCDICPIY 194
Query: 206 EYC 208
+YC
Sbjct: 195 DYC 197
>gi|389584671|dbj|GAB67403.1| endonuclease III homologue [Plasmodium cynomolgi strain B]
Length = 391
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 111/192 (57%), Gaps = 8/192 (4%)
Query: 15 TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIY 74
+D + K RF L+S +LS+ TKDK A+++L +GL T + + + E +K LI
Sbjct: 200 SDKTESAKVYRFQTLVSCMLSTRTKDKNTAMAMEKLKAHGL-TVQNMLRTSEEELKKLIQ 258
Query: 75 PVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGIC 134
V FY KA + +I++I KYD DIP +L+ELL LPGIG K+ ++++ +GI
Sbjct: 259 SVGFYNIKARQIIQISQILRDKYDYDIPRTLEELLKLPGIGQKVGHLILQTALNTHEGIA 318
Query: 135 VDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTP 194
VD HVHRI NRL WV T + T+ L+ ++P+ W +N LVGFGQ +C
Sbjct: 319 VDIHVHRISNRLNWVC-------TKNESVTQSKLESYVPRALWSELNKTLVGFGQVVCKA 371
Query: 195 LRPRCGMCTVSE 206
P C MC V++
Sbjct: 372 KSPLCTMCAVAD 383
>gi|294496431|ref|YP_003542924.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalophilus mahii
DSM 5219]
gi|292667430|gb|ADE37279.1| DNA-(apurinic or apyrimidinic site) lyase [Methanohalophilus mahii
DSM 5219]
Length = 206
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS T+D+V + A +RL + T + +AD I+ LI V FY KA
Sbjct: 26 FYILISTVLSQRTRDEVTEVASRRLF-DQYSTPVQMVEADVEKIEILIKDVGFYRVKAGR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I++I + +YD +P+S+ ELL LPG+G K AN V++ + + I VDTHVHRI NR
Sbjct: 85 IKEISQILIDEYDSQVPASMVELLKLPGVGRKTANCVLSYAFLE-KAIAVDTHVHRISNR 143
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T +P+QT LQ+ +P W +N L V FG+T+C PL P C +C +
Sbjct: 144 LGLV-------DTVTPDQTEIELQKQVPVSYWREVNELFVQFGKTVCKPLSPACEVCAIE 196
Query: 206 EYC 208
+ C
Sbjct: 197 DLC 199
>gi|328860800|gb|EGG09905.1| hypothetical protein MELLADRAFT_26899 [Melampsora larici-populina
98AG31]
Length = 228
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 118/208 (56%), Gaps = 19/208 (9%)
Query: 11 GVDETDSSLPPKE--RRFAVLLSALLSSLTKDKVADGA---LQRLLQNGLHTAEAIDKAD 65
G D + L P E RR + L+S +LSS TKD++ A L+R L NGL + ++ +
Sbjct: 32 GFDPLNPDLKPTEVERRLSCLVSLMLSSQTKDQITHQAVLNLKRNLSNGL-SVNSLRNSS 90
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
I++ I V F+ RKA +K++A+ + + D+P +L + +GPKMA + +
Sbjct: 91 LLQIENCINKVGFWRRKASYLKEMAEDLYSFHQSDVPKTLGK-----RVGPKMAFLALAS 145
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
W +GI VDTHVHRI NRLGW P T+ PEQTR LQ WLPK IN LLV
Sbjct: 146 AWSINEGIGVDTHVHRITNRLGWHLPP-----TTEPEQTRLNLQSWLPKNLHQEINHLLV 200
Query: 186 GFGQTICTPLRPRCGMCTVSE---YCPS 210
GFGQ IC P+ P+C C V + CPS
Sbjct: 201 GFGQLICLPIGPKCETCFVGQIEGLCPS 228
>gi|222444488|ref|ZP_03607003.1| hypothetical protein METSMIALI_00099 [Methanobrevibacter smithii
DSM 2375]
gi|261350964|ref|ZP_05976381.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
gi|222434053|gb|EEE41218.1| endonuclease III [Methanobrevibacter smithii DSM 2375]
gi|288860304|gb|EFC92602.1| endonuclease III [Methanobrevibacter smithii DSM 2374]
Length = 208
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+ +LS T+D+ D A + L + E +D A +++LI FY KA
Sbjct: 32 YKVLVRTILSQRTRDENTDQATKNLFGKYKNIYEIVD-APTDDVEELIRCSGFYRVKAAR 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++++I + +Y G++P +L EL+ LPG+G K AN V+ F + I VDTHVHRI NR
Sbjct: 91 IKEVSRILIDQYGGEVPDNLKELVELPGVGRKTANCVLVYA-FELPAIPVDTHVHRISNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V T +PEQT L + PKE W+++N L+V FGQTIC P+ P+C MC +S
Sbjct: 150 IGLVN-------TKTPEQTEVELAKIAPKELWIKLNDLMVQFGQTICKPMSPQCEMCPIS 202
Query: 206 EYC 208
+ C
Sbjct: 203 DIC 205
>gi|448511256|ref|XP_003866500.1| Ntg1 protein [Candida orthopsilosis Co 90-125]
gi|380350838|emb|CCG21061.1| Ntg1 protein [Candida orthopsilosis Co 90-125]
Length = 361
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 128/229 (55%), Gaps = 22/229 (9%)
Query: 2 KTLEPVYSLGVDETDSSL-------PPKERRFAVLLSALLSSLTKDKVADGALQRLLQNG 54
K PV S G + +++ PK+ RF +L+S +LSS TKD+V A+ L G
Sbjct: 110 KFFAPVDSQGCESMPNTITPGLKLSDPKKYRFQLLISLMLSSQTKDEVNYDAMINL-NTG 168
Query: 55 L---HTA----EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDE 107
L H EA+ + E I I V F+ RKA + + +I ++++GDIP+++++
Sbjct: 169 LGKKHAQGFCLEAMSQLSETEIDSYICKVGFHNRKAQYIARTCQILKSEFNGDIPNNIED 228
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREA 167
++ LPG+GPKM +++ GW GI VD H+HR+ + WV+ K ++PE+ R
Sbjct: 229 IVRLPGVGPKMGYLLLQAGWGINSGIGVDVHLHRLASLWHWVS-----PKATTPEKCRIE 283
Query: 168 LQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKE 214
L+ WLP+ W INPL+VGFGQ IC P C +C + + C +A K+
Sbjct: 284 LESWLPQNYWSDINPLIVGFGQVICVPRASNCDICALGRKKLCSAANKK 332
>gi|366994462|ref|XP_003676995.1| hypothetical protein NCAS_0F01560 [Naumovozyma castellii CBS 4309]
gi|342302863|emb|CCC70640.1| hypothetical protein NCAS_0F01560 [Naumovozyma castellii CBS 4309]
Length = 446
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 107/182 (58%), Gaps = 15/182 (8%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---------NGLHTAEAIDKADEATI 69
+ PK R+ VL S +LS+ TKD+V ++ +++ GL T E I + DE T+
Sbjct: 155 IEPKNYRYQVLTSVMLSAQTKDEVTARGVENIMRYCIEELNISQGL-TLEGILQIDEETL 213
Query: 70 KDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFN 129
LI V F+TRKA +K+ A++ + + D+P+ + LL+LPG+GPKMA + + W
Sbjct: 214 DQLIKQVGFHTRKAKFIKQTAQMLVDNFQSDVPTDIPGLLSLPGVGPKMAYLTLQKAWGR 273
Query: 130 VQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
+ GICVD HVHR C WV K+ +PE+TR+ L+ WLP W IN LLVG+GQ
Sbjct: 274 MAGICVDVHVHRFCRLFKWVN-----PKSKNPEETRKELESWLPHPLWREINSLLVGYGQ 328
Query: 190 TI 191
I
Sbjct: 329 II 330
>gi|148642332|ref|YP_001272845.1| endonuclease III [Methanobrevibacter smithii ATCC 35061]
gi|148551349|gb|ABQ86477.1| endonuclease III [Methanobrevibacter smithii ATCC 35061]
Length = 210
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+ +LS T+D+ D A + L + E +D A +++LI FY KA
Sbjct: 34 YKVLVRTILSQRTRDENTDQATKNLFGKYKNIYEIVD-APTDDVEELIRCSGFYRVKAAR 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++++I + +Y G++P +L EL+ LPG+G K AN V+ F + I VDTHVHRI NR
Sbjct: 93 IKEVSRILIDQYGGEVPDNLKELVELPGVGRKTANCVLVYA-FELPAIPVDTHVHRISNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V T +PEQT L + PKE W+++N L+V FGQTIC P+ P+C MC +S
Sbjct: 152 IGLVN-------TKTPEQTEVELAKIAPKELWIKLNDLMVQFGQTICKPMSPQCEMCPIS 204
Query: 206 EYC 208
+ C
Sbjct: 205 DIC 207
>gi|15643134|ref|NP_228177.1| endonuclease III [Thermotoga maritima MSB8]
gi|403252815|ref|ZP_10919120.1| endonuclease III [Thermotoga sp. EMP]
gi|418046300|ref|ZP_12684394.1| endonuclease III [Thermotoga maritima MSB8]
gi|8134433|sp|Q9WYK0.1|END3_THEMA RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|4980869|gb|AAD35453.1|AE001716_16 endonuclease III [Thermotoga maritima MSB8]
gi|351675853|gb|EHA59013.1| endonuclease III [Thermotoga maritima MSB8]
gi|402811577|gb|EJX26061.1| endonuclease III [Thermotoga sp. EMP]
Length = 213
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D+ + A ++L + T + + KA + DLI Y +KA
Sbjct: 23 FRVLISTVLSQRTRDENTEKASKKLFE-VYRTPQELAKAKPEDLYDLIKESGMYRQKAER 81
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I++I + KY G +P SL+ELL LPG+G K AN+V+ +G F + VDTHVHRI NR
Sbjct: 82 IVEISRILVEKYGGRVPDSLEELLKLPGVGRKTANIVLWVG-FKKPALAVDTHVHRISNR 140
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +PE+T EAL++ LP++ W IN +V FG+ IC P P C C +
Sbjct: 141 LGWV-------KTRTPEETEEALKKLLPEDLWGPINGSMVEFGRRICKPQNPLCEECFLK 193
Query: 206 EYC 208
+C
Sbjct: 194 NHC 196
>gi|11499282|ref|NP_070520.1| endonuclease III [Archaeoglobus fulgidus DSM 4304]
gi|2648861|gb|AAB89556.1| endonuclease III (nth) [Archaeoglobus fulgidus DSM 4304]
Length = 209
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/184 (42%), Positives = 109/184 (59%), Gaps = 11/184 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ALLSS T+D+ A Q L + E + K E I +LI V FY KA
Sbjct: 32 FQHLVAALLSSRTRDEATVRAAQNLFAK-VKKPEDLLKLSEEEIAELIKGVGFYRVKAKR 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++AK + Y ++P S +EL+ LPGIG K AN+V L + ++ I VDTHVHRI NR
Sbjct: 91 LKELAKKLVEDYSSEVPLSFEELVKLPGIGRKSANVV--LAYSDIPAIPVDTHVHRIANR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW +T+ PE+T E L+R P E W ++N +VGFGQT+C P +P C C +
Sbjct: 149 LGWA-------RTTKPEETEEVLKRLFPLEFWEKVNRAMVGFGQTVCKPQKPLCDECPI- 200
Query: 206 EYCP 209
+ CP
Sbjct: 201 KGCP 204
>gi|410083964|ref|XP_003959559.1| hypothetical protein KAFR_0K00690 [Kazachstania africana CBS 2517]
gi|372466151|emb|CCF60424.1| hypothetical protein KAFR_0K00690 [Kazachstania africana CBS 2517]
Length = 437
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 109/186 (58%), Gaps = 12/186 (6%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH--------TAEAIDKADEAT 68
+ P R VL+ +LSS TKD+V + +++ + T + + K DEA
Sbjct: 160 DQIEPINYRLQVLIGVMLSSQTKDEVTAKGMFNIMKYCIDELNISQGMTLQGLRKIDEAK 219
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ +LI V F+TRKA +K+ ++ ++++D DIP+++ ++L+LPG+GPKMA + + W
Sbjct: 220 LDELIKSVGFHTRKAKYIKQTCELLVSRFDSDIPTNITDMLSLPGVGPKMAYLTLQKAWG 279
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
++GICVD HV R+C WV K +P TR+ L++WLP+ W IN LLVGFG
Sbjct: 280 KLEGICVDVHVDRLCKLFKWVNP----DKCKTPNHTRQELEKWLPRPLWKEINSLLVGFG 335
Query: 189 QTICTP 194
Q I P
Sbjct: 336 QMIDRP 341
>gi|302340587|ref|YP_003805793.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta smaragdinae
DSM 11293]
gi|301637772|gb|ADK83199.1| DNA-(apurinic or apyrimidinic site) lyase [Spirochaeta smaragdinae
DSM 11293]
Length = 224
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 108/191 (56%), Gaps = 12/191 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+S ++S TKD V + +RL Q ++ D I LIYP FY KA
Sbjct: 45 YRVLVSTIISLRTKDAVTLESSRRLFQEAPDLG-SLAAMDTEQIAKLIYPAGFYRVKAAQ 103
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K IA + + +P+ D LLALPG+G K AN+V+ L F + ICVD HVHRI NR
Sbjct: 104 LKTIA---MKLKETGVPAERDRLLALPGVGRKTANLVLGLA-FGIPAICVDVHVHRISNR 159
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG +T T++PE++ AL+ LP+ W+ IN L V FGQT+C P+ P C C ++
Sbjct: 160 LGLIT-------TTTPEKSEMALEAILPRRYWIEINTLFVAFGQTLCKPVSPLCSRCPLA 212
Query: 206 EYCPSAFKESS 216
+ CP E S
Sbjct: 213 DVCPQNGVERS 223
>gi|94263508|ref|ZP_01287320.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
gi|93456146|gb|EAT06289.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
Length = 216
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LSS T+D+ GA +RL A ++ + E + LI+PV FY KA
Sbjct: 39 YRILVATILSSRTRDETTAGAAERLFVRAPDLA-SLARLGEKELARLIHPVGFYRAKAGY 97
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ I K+ G IP++++EL+ LPG+G K AN+V+ + F ICVDTHVHRI N
Sbjct: 98 LARLPGILAAKFGGQIPATVEELIQLPGVGRKTANLVVAVA-FEQPAICVDTHVHRIMNI 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T++PE T +AL+ LP W RIN LLV FGQ IC P+ C C ++
Sbjct: 157 WGYV-------RTATPEATEKALRAKLPLVHWRRINSLLVAFGQEICRPVGAHCDRCPLA 209
Query: 206 EYCP 209
+ CP
Sbjct: 210 DLCP 213
>gi|20093393|ref|NP_619468.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
gi|19918762|gb|AAM07948.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
Length = 216
Score = 142 bits (359), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 119/209 (56%), Gaps = 15/209 (7%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
M+ L +Y G TD S P F VL+S ++S T+D V A ++L + T E
Sbjct: 19 MRRLFELYPEGY--TDGSRDP----FFVLISTVMSHRTRDDVTYPAARKLFER-FSTPEE 71
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ AD I+ LI V FY K+ +K+I+ I L +YDG++P ++ LL LPG+G K AN
Sbjct: 72 MVGADVEEIEALIKDVGFYRVKSGRIKEISGILLEEYDGEVPDDMETLLKLPGVGRKTAN 131
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
V+ + + VDTHVHRI NRLG V +T +PE+T L++ P++ W I
Sbjct: 132 CVLAHAFLK-DALAVDTHVHRISNRLGLV-------ETKTPEETELELKKIFPQKYWKHI 183
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
N LLV GQ IC P+ P+C +C +++ CP
Sbjct: 184 NLLLVKLGQNICRPISPKCEVCVLNDMCP 212
>gi|148269689|ref|YP_001244149.1| endonuclease III [Thermotoga petrophila RKU-1]
gi|170288365|ref|YP_001738603.1| endonuclease III [Thermotoga sp. RQ2]
gi|281411600|ref|YP_003345679.1| endonuclease III [Thermotoga naphthophila RKU-10]
gi|147735233|gb|ABQ46573.1| endonuclease III [Thermotoga petrophila RKU-1]
gi|170175868|gb|ACB08920.1| endonuclease III [Thermotoga sp. RQ2]
gi|281372703|gb|ADA66265.1| endonuclease III [Thermotoga naphthophila RKU-10]
Length = 213
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 111/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D+ + A ++L + T + + KA + +LI Y +KA
Sbjct: 23 FRVLISTVLSQRTRDENTEKASKKLFE-VYRTPQELAKAKPEDLYNLIKESGMYRQKAAR 81
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I++I + +Y G +P SL+ELL LPG+G K AN+V+ +G F + VDTHVHRI NR
Sbjct: 82 IVEISRILVERYGGRVPDSLEELLKLPGVGRKTANIVLWVG-FRKPALAVDTHVHRISNR 140
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +PE+T EAL++ LP++ W IN +V FG+ IC P P C C +
Sbjct: 141 LGWV-------KTRTPEETEEALKKLLPEDLWGPINGSMVEFGRRICKPQNPLCEECFLK 193
Query: 206 EYC 208
+C
Sbjct: 194 NHC 196
>gi|435850481|ref|YP_007312067.1| putative endoIII-related endonuclease [Methanomethylovorans
hollandica DSM 15978]
gi|433661111|gb|AGB48537.1| putative endoIII-related endonuclease [Methanomethylovorans
hollandica DSM 15978]
Length = 208
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/185 (40%), Positives = 112/185 (60%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D V ++L + + A+ AD ++ LI V FY K+
Sbjct: 26 FYVLISTVLSQRTRDDVTIPTTEKLFR-VYGSPAAMAAADPEDLEKLIKDVGFYRVKSGR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I++I L +Y+G +P ++++LL LPG+G K AN V+T F I VDTHVHRI NR
Sbjct: 85 IIEISRILLQEYEGKVPDNINDLLKLPGVGRKTANCVLTYA-FRKDAIAVDTHVHRISNR 143
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L VT T++PE+T L+R +P+E W +N LLV FGQ +C P+ P+C +C +
Sbjct: 144 LCLVT-------TNAPEETEVELERVVPRELWQYVNELLVRFGQDVCRPISPKCDICVLE 196
Query: 206 EYCPS 210
+ CPS
Sbjct: 197 DLCPS 201
>gi|330837763|ref|YP_004412404.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta coccoides
DSM 17374]
gi|329749666|gb|AEC03022.1| DNA-(apurinic or apyrimidinic site) lyase [Sphaerochaeta coccoides
DSM 17374]
Length = 237
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 109/184 (59%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ L+S TKD V A +RL +T A+ + I+ I P F+ KA N
Sbjct: 55 FRVLIATLISLRTKDAVTYAASRRLFSVA-NTPRAMLALSQEQIETAIAPAGFFRTKARN 113
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I+K + ++ G +P + L++LPG+G K AN+ + LG F + ICVD HVH I NR
Sbjct: 114 ILEISKKLVEEHGGLVPPDKEALVSLPGVGTKTANLTLNLG-FGIDAICVDCHVHTIANR 172
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GWV+ T +PEQT + L++ LP+ W+ +N LLV +GQ ICT + PRC +C ++
Sbjct: 173 TGWVS-------TKNPEQTEKELEKILPRRFWIPLNELLVSYGQKICTSVSPRCSICPIA 225
Query: 206 EYCP 209
CP
Sbjct: 226 STCP 229
>gi|406981558|gb|EKE03014.1| Endonuclease III [uncultured bacterium]
Length = 257
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS D++ RL Q + +D E +K +I P+ F KA N
Sbjct: 69 FKVLVACILSIRNLDEITFPVADRLFQIADTPEDIVDLPIE-RLKAIIKPINFSESKAEN 127
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KKI+KI L + +G++P++++ LLA G+G K AN+V++LG N+ I VDTHVH++ NR
Sbjct: 128 IKKISKIILEQLNGEVPATMEGLLAFYGVGRKTANLVLSLGH-NIPAIAVDTHVHKVTNR 186
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V KT +PEQT AL+ LP+ W++INPL V G+ IC RP C +C +
Sbjct: 187 LGYV-------KTKTPEQTETALKEKLPQPYWIKINPLFVTHGKQICKTGRPWCDICPII 239
Query: 206 EYC 208
+YC
Sbjct: 240 DYC 242
>gi|94263146|ref|ZP_01286964.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
gi|93456517|gb|EAT06631.1| Helix-hairpin-helix motif:HhH-GPD [delta proteobacterium MLMS-1]
Length = 216
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LSS T+D+ GA +RL A ++ + E + LI+PV FY KA
Sbjct: 39 YRILVATILSSRTRDETTAGAAERLFVRAPDLA-SLARLGEKELARLIHPVGFYRAKAGY 97
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ + K+ G IP++++EL+ LPG+G K AN+V+ + F ICVDTHVHRI N
Sbjct: 98 LARLPGVLAAKFGGQIPATVEELIQLPGVGRKTANLVVAVA-FEQPAICVDTHVHRIMNI 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T++PE T +AL+ LP W RIN LLV FGQ IC P+ C C ++
Sbjct: 157 WGYV-------RTATPEATEKALRAKLPLVHWRRINSLLVAFGQEICRPVGAHCDRCPLA 209
Query: 206 EYCP 209
+ CP
Sbjct: 210 DLCP 213
>gi|426255021|ref|XP_004021164.1| PREDICTED: endonuclease III-like protein 1 [Ovis aries]
Length = 265
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 114/207 (55%), Gaps = 36/207 (17%)
Query: 6 PVYSLGVDET-DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PK +R+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 91 PVDQLGAEHCFDPSASPKVQRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 149
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ ++++ ++ G L + K+ +
Sbjct: 150 DDSTLGTLIYPVGFW--------RVSQSVASRPGGTT--------GLQKVSRKLNS---- 189
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
VDTHVHRI NRL W TK+ T SPE+TR AL+ WLP+E W IN LL
Sbjct: 190 ---------SVDTHVHRIANRLRW-----TKEATRSPEETRRALEEWLPRELWREINGLL 235
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSA 211
VGFGQ C P+RPRC C CP+A
Sbjct: 236 VGFGQQTCLPVRPRCQACLNRALCPAA 262
>gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54]
gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila
LSv54]
Length = 480
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 123/206 (59%), Gaps = 10/206 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F VL++ +LS+ TKD+ + +RL TAE + + E ++ LIYPV FY K
Sbjct: 32 EDPFKVLVATILSARTKDETTAASSKRLFARA-QTAEELTELSEEELQKLIYPVGFYKNK 90
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A +KK+ + L ++ G +P ++ ELL LPG+G K AN+V+++ F ICVDTHVHRI
Sbjct: 91 AGYLKKLPE-ALKEFKGVVPETMTELLRLPGVGRKTANLVLSIA-FKKPAICVDTHVHRI 148
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
N G+V +T++P +T AL+ LP+E W+ +N LLV GQ+IC P+ PRC C
Sbjct: 149 MNIWGYV-------ETATPLKTEMALREKLPEEFWIPVNSLLVSLGQSICRPVSPRCSEC 201
Query: 203 TVSEYCPSAFKESSTSSSKSKKSESS 228
+ + CP ++ K+KK+ S
Sbjct: 202 PLEKECPQLGITPRKATLKAKKNTPS 227
>gi|253700536|ref|YP_003021725.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M21]
gi|251775386|gb|ACT17967.1| DNA-(apurinic or apyrimidinic site) lyase [Geobacter sp. M21]
Length = 220
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+S +LS T+D+ A QRL T + + + I+ IYPV FY KA
Sbjct: 38 YKVLVSCILSLRTRDQTTAEASQRLFALA-DTPQKMAELSVPEIEQAIYPVGFYRVKAQQ 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ Y G +P L+ LL G+G K AN+V+TLG + GICVD HVHRICNR
Sbjct: 97 ILELSFQIRELYQGRVPDELETLLTFKGVGRKTANLVLTLG-YGKPGICVDIHVHRICNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V KT +PEQT AL++ LP E W+ IN LLV FGQ CTP+ PRC C +
Sbjct: 156 WGYV-------KTGTPEQTEGALRKKLPPEYWIIINDLLVTFGQNQCTPVSPRCSNCPLY 208
Query: 206 EYC 208
C
Sbjct: 209 ALC 211
>gi|154249096|ref|YP_001409921.1| endonuclease III [Fervidobacterium nodosum Rt17-B1]
gi|154153032|gb|ABS60264.1| endonuclease III [Fervidobacterium nodosum Rt17-B1]
Length = 221
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 114/195 (58%), Gaps = 10/195 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL++ +LS ++D+ + A ++L + E+I A + +LI P Y KA
Sbjct: 37 YKVLITTILSQRSRDENTEVASKQLFEK-YPNVESIANAKPEELYELIKPAGLYREKAER 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++KI L KYDG +P+ L+ELL LPG+G K AN+V+ + F+ + VDTHVHRI NR
Sbjct: 96 IIIVSKILLEKYDGVVPNKLEELLELPGVGRKTANIVLHVS-FDQAALAVDTHVHRISNR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +PEQT E L++ + + W IN +V FG+ IC P+ PRC C ++
Sbjct: 155 LGWV-------KTKTPEQTEEELKKIMSPQLWGPINGSMVEFGKNICKPISPRCEQCFLT 207
Query: 206 EYCPSAFKESSTSSS 220
E C FK S +
Sbjct: 208 ECC-DFFKNKYNSKT 221
>gi|325088276|gb|EGC41586.1| endonuclease III [Ajellomyces capsulatus H88]
Length = 533
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 52 QNGLHTA-----EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
QN HT E I A + +LI V F+ K +K A I +Y+ DIP +++
Sbjct: 338 QNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNSDIPPTVE 397
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
L+ LPG+GPKMA + M+ W +GI VD HVHRI N GW KT +PE+TR
Sbjct: 398 GLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRA 450
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
AL+ WLPK++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 451 ALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECELA 489
>gi|240282136|gb|EER45639.1| endonuclease III [Ajellomyces capsulatus H143]
Length = 533
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 52 QNGLHTA-----EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
QN HT E I A + +LI V F+ K +K A I +Y+ DIP +++
Sbjct: 338 QNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNSDIPPTVE 397
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
L+ LPG+GPKMA + M+ W +GI VD HVHRI N GW KT +PE+TR
Sbjct: 398 GLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRA 450
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
AL+ WLPK++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 451 ALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECELA 489
>gi|225559205|gb|EEH07488.1| DNA base excision repair N-glycosylase 1, mitochondrial precursor
[Ajellomyces capsulatus G186AR]
Length = 535
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 52 QNGLHTA-----EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
QN HT E I A + +LI V F+ K +K A I +Y+ DIP +++
Sbjct: 339 QNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAVILRDEYNSDIPPTVE 398
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
L+ LPG+GPKMA + M+ W +GI VD HVHRI N GW KT +PE+TR
Sbjct: 399 GLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRA 451
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
AL+ WLPK++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 452 ALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECELA 490
>gi|50289277|ref|XP_447069.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526378|emb|CAG60002.1| unnamed protein product [Candida glabrata]
Length = 468
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 12/183 (6%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH--------TAEAIDKADEAT 68
S + P+ R VL+ +LS+ TKD+V + +++ + T +A+ + DE
Sbjct: 162 SEILPRNYRLQVLVGVMLSAQTKDEVTAMGMYNIMKYCIEELKDAQGITLDALLRIDEQV 221
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ +LI+ V F+ RKA +K+ A I KYD D+P ++ ++L LPG+GPKM + + W
Sbjct: 222 LDELIHSVGFHKRKANFIKRTAAILNEKYDQDVPDNVTDILGLPGVGPKMGYLTLQKAWG 281
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
++GICVD HV R+C WV K +P TR+ LQ+WLP W IN LLVGFG
Sbjct: 282 KIEGICVDVHVDRLCKMWKWVDP----DKCKTPNDTRKQLQKWLPPRLWTEINGLLVGFG 337
Query: 189 QTI 191
Q I
Sbjct: 338 QVI 340
>gi|429962695|gb|ELA42239.1| hypothetical protein VICG_00638 [Vittaforma corneae ATCC 50505]
Length = 234
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 113/205 (55%), Gaps = 12/205 (5%)
Query: 6 PVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN-GLHTAEAIDKA 64
PV S+G + P + F +L+ LLSS TKD++ A++ L G+ T E + +
Sbjct: 17 PVDSMGSSCVGHAYPKDIKNFQILVFLLLSSQTKDEITYSAIESLNGTLGILTPENVLNS 76
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E + + V F+ +K + +I++ K +P + +ELL LPG+G KMAN+ +
Sbjct: 77 REEDVSKCLKKVGFHNKKLKFLYEISR----KVKDKMPETFEELLKLPGVGKKMANLYLN 132
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+GI VDTHVHR+ NR+G V T PE TR AL+ ++EW +N +
Sbjct: 133 HALGRNEGISVDTHVHRVSNRIGLVC-------TKDPEHTRRALESIFDRDEWPEVNRVF 185
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCP 209
VGFGQ IC ++P+CG C+V + CP
Sbjct: 186 VGFGQMICKAIKPKCGECSVQDRCP 210
>gi|401626951|gb|EJS44864.1| ntg1p [Saccharomyces arboricola H-6]
Length = 401
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 106/183 (57%), Gaps = 12/183 (6%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH--------TAEAIDKADEAT 68
+ PK R VLL +LSS TKD+V A+ ++Q + T EA+ + E
Sbjct: 135 DQISPKNYRLQVLLGVMLSSQTKDEVTAMAMYNIMQYCIQELGVEQGITLEAVLQISETK 194
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+ +LI+ V F+TRKA + +I ++ D+P++++ELLALPG+GPKMA + + W
Sbjct: 195 LDELIHSVGFHTRKAKYILATCQILQDQHLRDVPATINELLALPGVGPKMAYLTLQKAWG 254
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
++GICVD HV R+ WV QK +P+QTR LQ WLP+ W IN LLVGFG
Sbjct: 255 KIEGICVDVHVDRLTKAWKWV----DPQKCRTPDQTRILLQDWLPRGLWTEINGLLVGFG 310
Query: 189 QTI 191
Q I
Sbjct: 311 QII 313
>gi|389580745|ref|ZP_10170772.1| putative endoIII-related endonuclease [Desulfobacter postgatei
2ac9]
gi|389402380|gb|EIM64602.1| putative endoIII-related endonuclease [Desulfobacter postgatei
2ac9]
Length = 223
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 116/201 (57%), Gaps = 14/201 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS+ TKD+V A +RLL+ EA+ + I++LI+PV FY KA
Sbjct: 37 FKVLVATILSARTKDEVTAVAARRLLEKA-PDPEALKALSISQIQELIFPVGFYKSKAQY 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K+ + L + G +P +D L+ LPG+G K AN+V + F+ ICVDTHVHRI N
Sbjct: 96 LSKLPE-ALDAFQGQVPDEIDALVTLPGVGRKTANLVRAVA-FDKDAICVDTHVHRIMNI 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V KT +P T +AL++ LPK+ W +N +LV FGQ C P+ P C C +
Sbjct: 154 WGYV-------KTKTPLDTEKALRKKLPKKFWKEVNRILVTFGQGTCRPVGPHCYRCVLE 206
Query: 206 EYCPSAFKESSTSSSKSKKSE 226
++CP + +KS K E
Sbjct: 207 KHCP----QIGVKPAKSPKKE 223
>gi|156100939|ref|XP_001616163.1| endonuclease III homologue [Plasmodium vivax Sal-1]
gi|148805037|gb|EDL46436.1| endonuclease III homologue, putative [Plasmodium vivax]
Length = 417
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 8/194 (4%)
Query: 15 TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIY 74
+D K RF L+S +LS+ T+D+ A+Q+L +GL T + K E ++ LI
Sbjct: 216 SDKRESEKVYRFQTLVSCMLSTRTRDESTAMAMQKLKAHGL-TIHNMLKTPEEELQKLIQ 274
Query: 75 PVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGIC 134
V FY KA + +I++I +YD DIP +L+ LL LPGIG K+A++++ +GI
Sbjct: 275 AVGFYKIKAKQIIQISQILRDQYDYDIPHTLEGLLKLPGIGQKVAHLILQTALDTHEGIA 334
Query: 135 VDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTP 194
VD HVHRI NRL WV T + T+ L+ ++P+ W +N LVGFGQ +C
Sbjct: 335 VDIHVHRISNRLNWVC-------TKNESATQSKLESFVPRTLWSELNKTLVGFGQVVCKA 387
Query: 195 LRPRCGMCTVSEYC 208
P C MC V++ C
Sbjct: 388 KSPHCNMCAVTDGC 401
>gi|358059574|dbj|GAA94731.1| hypothetical protein E5Q_01385 [Mixia osmundae IAM 14324]
Length = 784
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 123/228 (53%), Gaps = 14/228 (6%)
Query: 4 LEPVYSLGVDETDSSLP----PKERRFAVLLSALLSSLTKDKVADGALQRLLQN--GLHT 57
+ PV ++G D+ +L P++ R+ L+S +LSS TKD+V D A L G
Sbjct: 489 IAPVDTMGCDKAGRNLKDIITPRDDRYQTLISLMLSSQTKDQVTDEAASNLRDRIPGGFN 548
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
E+I A + I I V F+ RK +++ +++ +D D+P ++ EL LPG+GPK
Sbjct: 549 IESILAASDEQISSCINKVGFWRRKTDYIRRTSEMLRDLHDSDVPKTIQELCDLPGVGPK 608
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
M + + N GI VDTHVHRI +RL W +++ E+TR L+ WLP E
Sbjct: 609 MGFLSLQSQGIN-GGIGVDTHVHRITHRLRW-----HRKEPKDAEETRLNLESWLPSELH 662
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFKESSTSSSKSK 223
IN LVGFGQ +C P+ PRC +C + + CPS K + S SK
Sbjct: 663 GVINKTLVGFGQAVCLPVGPRCDLCDLGKASLCPSRVKVDTLKRSPSK 710
>gi|303313429|ref|XP_003066726.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106388|gb|EER24581.1| HhH-GPD family base excision DNA repair protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 449
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 110/216 (50%), Gaps = 39/216 (18%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAIDKADEAT----------- 68
+ERRF +L++ +LSS TKD V A+ RL + H D AD +
Sbjct: 208 QERRFHILVALMLSSQTKDTVTAVAMHRLHTELDREHDDNNEDGADASKKPAVRWDTTTH 267
Query: 69 -------------------IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELL 109
+ LI V F+ K ++ A I + Y+ DIP + +L+
Sbjct: 268 SAGHSTLTISNILRVSATRLNQLIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLM 327
Query: 110 ALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQ 169
ALPG+GPKMA + M+ W GI VD HVHRI N GWV +T +PE+TR L+
Sbjct: 328 ALPGVGPKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWV-------RTKTPEETRVLLE 380
Query: 170 RWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
WLP+E+W IN LLVG GQT+C P+ RC C ++
Sbjct: 381 AWLPREKWREINWLLVGLGQTVCLPVGRRCWECVLA 416
>gi|320036319|gb|EFW18258.1| DNA repair protein Ntg1 [Coccidioides posadasii str. Silveira]
Length = 449
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 110/216 (50%), Gaps = 39/216 (18%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAIDKADEAT----------- 68
+ERRF +L++ +LSS TKD V A+ RL + H D AD +
Sbjct: 208 QERRFHILVALMLSSQTKDTVTAVAMHRLHTELDREHDDNNEDGADASKKPAVRWDTTTH 267
Query: 69 -------------------IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELL 109
+ LI V F+ K ++ A I + Y+ DIP + +L+
Sbjct: 268 SAGHSTLTISNILRVSATRLNQLIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLM 327
Query: 110 ALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQ 169
ALPG+GPKMA + M+ W GI VD HVHRI N GWV +T +PE+TR L+
Sbjct: 328 ALPGVGPKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWV-------RTKTPEETRVLLE 380
Query: 170 RWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
WLP+E+W IN LLVG GQT+C P+ RC C ++
Sbjct: 381 AWLPREKWREINWLLVGLGQTVCLPVGRRCWECALA 416
>gi|154273841|ref|XP_001537772.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415380|gb|EDN10733.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 532
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 93/159 (58%), Gaps = 12/159 (7%)
Query: 52 QNGLHTA-----EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
QN HT E I A + +LI V F+ K +K A I +Y+ DIP +++
Sbjct: 338 QNNQHTKSTLTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNFDIPPTVE 397
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
L+ LPG+GPKMA + M+ W +GI VD HVHRI N GW KT +PE+TR
Sbjct: 398 GLMRLPGVGPKMAYLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRA 450
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
AL+ WLPK++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 451 ALESWLPKDKWHEINKLLVGLGQTVCLPVARRCGECELA 489
>gi|157364361|ref|YP_001471128.1| endonuclease III [Thermotoga lettingae TMO]
gi|157314965|gb|ABV34064.1| endonuclease III [Thermotoga lettingae TMO]
Length = 217
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 114/183 (62%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS TKD+ D A ++L ++ ++ A + I DLI Y +KA
Sbjct: 30 FRVLIATILSQRTKDENTDKASKKLFES-FPDVYSLSMAKPSQIYDLIKASGMYRQKAER 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K+++I + K++G IP++L +LL+LPG+G K AN+V+ F + VDTHVHRI NR
Sbjct: 89 IIKVSQIIVEKFNGKIPANLHDLLSLPGVGRKTANIVL-YHCFCQPALAVDTHVHRISNR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V KT +PEQT E L++ +P++ W IN +V FG+ +C P +P+C C V+
Sbjct: 148 LGFV-------KTKTPEQTEEGLKKIIPEKFWGPINGAMVEFGKKVCLPRKPKCQECPVN 200
Query: 206 EYC 208
+YC
Sbjct: 201 KYC 203
>gi|15678789|ref|NP_275906.1| endonuclease III [Methanothermobacter thermautotrophicus str. Delta
H]
gi|2621854|gb|AAB85267.1| endonuclease III [Methanothermobacter thermautotrophicus str. Delta
H]
Length = 233
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 115/210 (54%), Gaps = 16/210 (7%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
L VYS+ V E + VL+ +LS T+D+ D A L + + E +
Sbjct: 31 LRSVYSMRVFEDRDP-------YRVLIRTILSQRTRDENTDEATASLFER-YPSIEDVAY 82
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
A I+ LI FY KA ++++++I L +YDG +P ++ELL LPG+G K AN V+
Sbjct: 83 APLEEIEALIRKAGFYHVKARRVREVSRIILEEYDGKVPDDINELLKLPGVGRKTANCVL 142
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
F I VDTHVHRI NR+G V T +PE+T AL + +P+E W+ +N L
Sbjct: 143 VYA-FGRPAIPVDTHVHRISNRIGLV-------DTRTPEETERALMKVIPREYWIELNDL 194
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
+V FGQ IC PL PR C ++++C F+
Sbjct: 195 MVQFGQDICRPLGPRHEECPIADHCDYYFR 224
>gi|408381370|ref|ZP_11178919.1| endonuclease III [Methanobacterium formicicum DSM 3637]
gi|407815837|gb|EKF86400.1| endonuclease III [Methanobacterium formicicum DSM 3637]
Length = 213
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 16/208 (7%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
M+ L+ Y L V E + VL+ +LS T+D D A +L + HT
Sbjct: 11 MERLQQQYDLRVFEDGDP-------YRVLIRTILSQRTRDDNTDRASAQLF-SKYHTINE 62
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I +AD ++ LI P FY KA + ++++ L K+ G +P + LL LPG+G K AN
Sbjct: 63 IAEADPTLLEPLIRPAGFYHVKAQRIVEVSRKLLDKFKGQVPDDMKNLLELPGVGRKTAN 122
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
V+ G F + I VD HVHRI NRLG V T +PE+T L++ +P+E W+ +
Sbjct: 123 CVLVYG-FQIPAIPVDVHVHRISNRLGLVN-------TKTPEETEAELEKIVPREYWIEL 174
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N L+V FGQTIC P PR C + E C
Sbjct: 175 NDLMVQFGQTICRPQSPRHEECPLQELC 202
>gi|251771121|gb|EES51705.1| putative endonuclease III [Leptospirillum ferrodiazotrophum]
Length = 213
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 108/182 (59%), Gaps = 10/182 (5%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
VLLS +LS T+D V + A RL E+I +E ++ +IYPV FY KA +K
Sbjct: 34 VLLSTILSLRTRDPVMEAASLRLFSRA-PDLESIALMEEEELERIIYPVGFYRTKAKTIK 92
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+IAKI L K+ G +PS + LL+LPG+G K A +V+ G F + VDTHVHRI NR G
Sbjct: 93 QIAKIVLEKWKGSLPSEISPLLSLPGVGLKTATLVLGAG-FGKSVLTVDTHVHRIANRWG 151
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
V KT + T L + +P +++NP+LV FGQTIC PL PRC CT+S+
Sbjct: 152 AV-------KTKDADATYWELDKIVPNTLKLKVNPVLVSFGQTICLPLSPRCSECTLSQ- 203
Query: 208 CP 209
CP
Sbjct: 204 CP 205
>gi|325958693|ref|YP_004290159.1| DNA-(apurinic or apyrimidinic site) lyase [Methanobacterium sp.
AL-21]
gi|325330125|gb|ADZ09187.1| DNA-(apurinic or apyrimidinic site) lyase [Methanobacterium sp.
AL-21]
Length = 216
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 122/219 (55%), Gaps = 17/219 (7%)
Query: 3 TLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
LE +Y+L E + S P F VL+ +LS T+D+ D A +L + T E I
Sbjct: 15 NLEDIYTLR--EFEDSDP-----FRVLIRTILSQRTRDENTDAA-SAMLFSKYSTPEEIA 66
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
A ++ LI FY KA ++++++I Y+ +P + ELL+LPG+G K AN V
Sbjct: 67 NAPTEEVEKLIKKSGFYHVKASRVREVSRIIHEDYNDTVPEDMAELLSLPGVGRKTANCV 126
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ G F+ I VD HVHRI NR+G V T +P++T E L + +PK+ W+ +N
Sbjct: 127 LVYG-FHKDAIPVDVHVHRISNRIGLVN-------TGTPDETEEKLMKIVPKKFWLPLND 178
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSK 221
L V FGQTIC P+ P+ +C ++EYC +K T++ K
Sbjct: 179 LFVQFGQTICKPIGPKHEICPIAEYC-DYYKNMKTTNEK 216
>gi|258573229|ref|XP_002540796.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901062|gb|EEP75463.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 655
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 114/219 (52%), Gaps = 47/219 (21%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHT---------------AEAIDKADE 66
+ERRF +L++ +LSS TKD V A+ RL HT +A+ + D
Sbjct: 416 QERRFHILVALMLSSQTKDTVTAVAMHRL-----HTELGPEHDDRDANTPDTKAVAQWDT 470
Query: 67 AT--------------------IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
+T + LI+ V F+ K ++ A + +D DIP +
Sbjct: 471 STHSTARSTLTIANILRVPAPRLNQLIHSVGFHNLKTKYLQTTASLLQAHHDSDIPRTAA 530
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
+L++LPG+GPKMA + M+ W GI VD HVHRI N GWV +T +PE+TR
Sbjct: 531 DLMSLPGVGPKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWV-------RTKTPEETRV 583
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L+ WLP+++W IN LLVG GQT+C P+ RCG C ++
Sbjct: 584 VLEAWLPRDKWREINWLLVGLGQTVCLPVGRRCGECALA 622
>gi|197118690|ref|YP_002139117.1| endonuclease III-like DNA glycosidase [Geobacter bemidjiensis Bem]
gi|197088050|gb|ACH39321.1| endonuclease III-related DNA glycosidase, HhH-GPD superfamily
[Geobacter bemidjiensis Bem]
Length = 220
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 105/183 (57%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+S +LS T+D+ A QRL T + + + I+ IYPV FY KA
Sbjct: 38 YKVLVSCILSLRTRDQTTAEASQRLFALA-DTPQKMTELSVPEIEQAIYPVGFYRVKAQQ 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ + G +P L+ LL G+G K AN+V+TLG + GICVD HVHRICNR
Sbjct: 97 ILELSFQIGELHQGRVPDELETLLTFKGVGRKTANLVLTLG-YGKPGICVDIHVHRICNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V KT +PEQT AL++ LP E W+ IN LLV FGQ CTP+ PRC C +
Sbjct: 156 WGYV-------KTVNPEQTEGALRKKLPPEYWIIINDLLVTFGQNQCTPVSPRCSTCPLY 208
Query: 206 EYC 208
C
Sbjct: 209 ALC 211
>gi|410670631|ref|YP_006923002.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methanolobus psychrophilus R15]
gi|409169759|gb|AFV23634.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methanolobus psychrophilus R15]
Length = 204
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 112/185 (60%), Gaps = 11/185 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS T+D+V A +RL + + + A+ I+ LI V FY KA
Sbjct: 27 YYMLISTVLSQRTRDEVTIPATRRLFE-AFDSPLKMASAEIDEIQVLIKDVGFYRVKAQR 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW-FNVQGICVDTHVHRICN 144
+ I++I L Y G +P S++ELL LPG+G K AN V LG+ F I VDTHVHRI N
Sbjct: 86 IIDISRIMLKDYGGIVPDSMNELLKLPGVGRKTANCV--LGYAFEKDVIAVDTHVHRISN 143
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
R G V KTSSP++T + L++ + +++W IN L+V FGQ +C P+ PRCG C +
Sbjct: 144 RFGLV-------KTSSPDETEKELEKVVSRQDWKDINGLMVLFGQNVCRPMSPRCGECRL 196
Query: 205 SEYCP 209
++ CP
Sbjct: 197 NDICP 201
>gi|119191666|ref|XP_001246439.1| hypothetical protein CIMG_00210 [Coccidioides immitis RS]
gi|392864330|gb|EAS34840.2| DNA repair protein Ntg1 [Coccidioides immitis RS]
Length = 451
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 112/218 (51%), Gaps = 41/218 (18%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLL------------QNG--------------- 54
+ERRF +L++ +LSS TKD V A+ RL ++G
Sbjct: 208 QERRFHILVALMLSSQTKDTVTAVAMHRLHTELDREHDDGNNEDGGADASKKPAVRWDTT 267
Query: 55 LHTA-------EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDE 107
H+A I + + LI V F+ K ++ A I + Y+ DIP + +
Sbjct: 268 THSAGHSTLTISNILRVSATRLNQLIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAAD 327
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREA 167
L+ALPG+GPKMA + M+ W GI VD HVHRI N GWV +T +PE+TR
Sbjct: 328 LMALPGVGPKMAYLCMSSAWGVDDGIGVDVHVHRITNLWGWV-------RTKTPEETRVL 380
Query: 168 LQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L+ WLP+E+W IN LLVG GQT+C P+ RC C ++
Sbjct: 381 LEAWLPREKWREINWLLVGLGQTVCLPVGRRCWECALA 418
>gi|73668473|ref|YP_304488.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
gi|72395635|gb|AAZ69908.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
Length = 204
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+S ++S T+D V A +L + T E + +AD + I+ LI V FY KA
Sbjct: 26 FFALISTVMSHRTRDDVTYPAASKLFER-FSTPEEMVRADVSEIETLIKDVGFYRVKAGR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+I+++ L KY G +P ++ LL LPG+G K AN V+ + + VDTHVHRI NR
Sbjct: 85 IKEISRLLLEKYGGRVPDDMEALLELPGVGRKTANCVLAHAFLK-DALAVDTHVHRISNR 143
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V +T PE+T L++ P++ W +N LLV GQ C P+ PRC CT+
Sbjct: 144 LGLV-------ETKVPEETETELKKIFPQKYWRHVNLLLVKLGQNTCRPISPRCKTCTLD 196
Query: 206 EYCP 209
+ CP
Sbjct: 197 DICP 200
>gi|224367145|ref|YP_002601308.1| protein NthA [Desulfobacterium autotrophicum HRM2]
gi|223689861|gb|ACN13144.1| NthA [Desulfobacterium autotrophicum HRM2]
Length = 221
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 108/187 (57%), Gaps = 10/187 (5%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ TKD+ A +RL + A+ I DLIYPV FYT K
Sbjct: 32 EEPFRILVATILSARTKDETTAAACKRLFKKA-PDVNALAGLSRQEISDLIYPVGFYTSK 90
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
+ ++++ K + +DG +P ++D+L+ LPG+G K AN+VM++ F ICVDTHVHRI
Sbjct: 91 SGYLERLPK-AMEAFDGKVPQNIDDLVTLPGVGRKTANLVMSVA-FKKDAICVDTHVHRI 148
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
N +V T +P +T AL++ LP + W R+N +LV FGQ C P+ C +C
Sbjct: 149 MNLWEYV-------DTRNPLETEMALRKKLPPKLWQRVNAILVAFGQGTCRPVGSHCDVC 201
Query: 203 TVSEYCP 209
+ CP
Sbjct: 202 VLESMCP 208
>gi|406894390|gb|EKD39215.1| hypothetical protein ACD_75C00473G0002 [uncultured bacterium]
Length = 484
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 10/184 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS+ TKD A RL Q A A+ + +EA I +LIYPV FY KA +
Sbjct: 35 FKVLVATILSARTKDDTTAAASARLFQVAPDCA-ALARLEEAQIAELIYPVGFYKTKAKH 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + + L + G +P +++EL+ LPG+G K AN+V+++ F ICVDTHVHRI N
Sbjct: 94 LAMLPE-ALRSFHGMVPDTIEELVTLPGVGRKTANLVVSVA-FQKPAICVDTHVHRIMNI 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+V +T +P +T AL+ LP + W+ +N LLV FGQ+IC P+ P C +C +
Sbjct: 152 WEYV-------ETDTPLKTEMALRAKLPDKHWIGVNSLLVAFGQSICRPVSPHCDICPLL 204
Query: 206 EYCP 209
CP
Sbjct: 205 TACP 208
>gi|13541635|ref|NP_111323.1| endonuclease III [Thermoplasma volcanium GSS1]
gi|14325034|dbj|BAB59960.1| endonuclease III [Thermoplasma volcanium GSS1]
Length = 215
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 114/191 (59%), Gaps = 9/191 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD+ D A L + T E + AD + + +I V F+ KA
Sbjct: 31 FWMLITTVLSQRTKDETTDQAALALYER-YRTIEGLASADVSDVGSIISKVGFWRVKAKK 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA+I +Y +P+S+D+LL+LPG+G K A++V+ G + I VDTHV RI +R
Sbjct: 90 IIMIAQIIRDEYGSKVPASMDQLLSLPGVGVKTASVVLAEG-LGIPMIAVDTHVFRISHR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+GW + + +PEQT + L + +PK+ W+ NP LV FG+ +C P+ P+C MC ++
Sbjct: 149 IGWSS-------SKTPEQTAQDLMQIIPKDLWIGFNPTLVEFGKAVCRPVSPKCSMCRIN 201
Query: 206 EYCPSAFKESS 216
E+C K++S
Sbjct: 202 EFCEYYKKKNS 212
>gi|320354727|ref|YP_004196066.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
gi|320123229|gb|ADW18775.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
Length = 481
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 111/184 (60%), Gaps = 10/184 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS+ TKD+V A +RL TA + A ++ LIYPV F+ KA +
Sbjct: 35 FKVLVATILSARTKDEVTAAAARRLFAR-ASTAAELATLTVADVEQLIYPVGFFRTKAKH 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ L ++ G +P +D L+ LPG+G K AN+V+ + F+ ICVDTHVHRI N
Sbjct: 94 LGELPG-ALQRFGGVVPDDIDSLVQLPGVGRKTANLVVAVA-FHKPAICVDTHVHRIMNI 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T++P QT L++ LP++ W+RIN LLV FGQ C P RP C C ++
Sbjct: 152 WGYV-------QTTTPLQTEMVLRQKLPRQYWIRINGLLVAFGQGTCKPQRPHCDRCVIA 204
Query: 206 EYCP 209
YCP
Sbjct: 205 AYCP 208
>gi|297569473|ref|YP_003690817.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
gi|296925388|gb|ADH86198.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
Length = 490
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL++ +LS+ T+D+ GA RL + + + E + LI PV F+ KA
Sbjct: 39 YKVLVATILSARTRDETTAGAAARLFARA-PDLDTLARLSEEELAKLIRPVGFFRAKAGY 97
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ K+ G IP++++EL+ LPG+G K AN+V+ + F ICVDTHVHRI N
Sbjct: 98 LARLPAALTAKFRGKIPATVEELVQLPGVGRKTANLVVAVA-FERPAICVDTHVHRIMNI 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T++PE T +AL+ LP+ W RIN LLV FGQ IC P+ P C C ++
Sbjct: 157 WGYVN-------TTTPEATEKALRAKLPQPYWRRINSLLVAFGQEICRPVGPHCDRCPLA 209
Query: 206 EYCP 209
+ CP
Sbjct: 210 QLCP 213
>gi|393906282|gb|EJD74237.1| hypothetical protein LOAG_18420 [Loa loa]
Length = 204
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 7/130 (5%)
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
+KA +KK+AKI +YDGDIP++++EL +LPG+G KMA + M W ++G+ VDTHVH
Sbjct: 75 KKALYIKKVAKILKERYDGDIPNTIEELCSLPGVGEKMAYLAMCNAWDQMKGLGVDTHVH 134
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI NRLGW+ KTS+P+++R AL+ +P+EEW +N LLVGFGQ C P+ P+C
Sbjct: 135 RISNRLGWI-------KTSNPKESRIALEALVPREEWQELNKLLVGFGQQTCLPVLPKCS 187
Query: 201 MCTVSEYCPS 210
C C +
Sbjct: 188 ECLNRNICAA 197
>gi|254168132|ref|ZP_04874979.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|197622898|gb|EDY35466.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
Length = 211
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 120/203 (59%), Gaps = 14/203 (6%)
Query: 17 SSLPPKERR----FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL 72
+++PP + F VL++ ++S TKD+V ++L + A I L
Sbjct: 16 ANVPPHPYKSREPFKVLIATVISQRTKDEVTYTVAEKLF-GKYPLPRDLKNAPTDDIAHL 74
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
IYP FY +KA +K+IAKI YDG +P +L++LL LPG+G K AN+V++ ++
Sbjct: 75 IYPAGFYNQKAKKIKEIAKIIDEDYDGKVPDNLEDLLKLPGVGRKTANIVLS-RCYDKDV 133
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VDTHVHRI NRLGWV T +PE+T L + LPK+ W IN LLV FG+TIC
Sbjct: 134 IAVDTHVHRISNRLGWVN-------TKTPEETERELMKVLPKKYWKDINELLVMFGRTIC 186
Query: 193 TPLRPRCGMCTVSEYCPSAFKES 215
P+ P+C +C + +YC +KE+
Sbjct: 187 RPVAPKCDVCPIKKYC-KYYKEN 208
>gi|327353694|gb|EGE82551.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis ATCC 18188]
Length = 539
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 92/159 (57%), Gaps = 9/159 (5%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGP 116
T E I + + +LI V F+ K +K A I +Y+ DIP + + L+ LPG+GP
Sbjct: 352 TLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPGVGP 411
Query: 117 KMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEE 176
KMA + M+ W +GI VD HVHRI N GW KT +PE+TR AL+ WLPK++
Sbjct: 412 KMAYLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRAALESWLPKDK 464
Query: 177 WVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFK 213
W +N LLVG GQT+C P+ RCG C + + C S K
Sbjct: 465 WHEVNKLLVGLGQTVCLPVARRCGECELAGTGLCKSEIK 503
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 10/63 (15%)
Query: 6 PVYSLGVDE---TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
PV ++G + DSS P++RRF +L++ +LSS TKD V A+QR LHT A +
Sbjct: 190 PVDTMGCSQLYWRDSS--PRDRRFHILIALMLSSQTKDTVTAIAMQR-----LHTELAPE 242
Query: 63 KAD 65
+A+
Sbjct: 243 QAN 245
>gi|383785899|ref|YP_005470468.1| DNA-(apurinic or apyrimidinic site) lyase [Fervidobacterium
pennivorans DSM 9078]
gi|383108746|gb|AFG34349.1| endonuclease III [Fervidobacterium pennivorans DSM 9078]
Length = 220
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 109/189 (57%), Gaps = 10/189 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS ++D+ + + + L + E + +A + DLI P Y KA
Sbjct: 40 FKVLITTILSQRSRDENTEVSAKNLF-SVYENVEQLAQAKPEELYDLIRPSGLYKEKAER 98
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++KI L KY G +P +L+ELL+LPG+G K AN+V+ + F Q + VDTHVHRI NR
Sbjct: 99 IIAVSKIILEKYGGRVPDNLEELLSLPGVGRKTANIVLHVS-FGQQALAVDTHVHRISNR 157
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV T +PEQT E L++ L W +N +V FG+ IC P+ P+C C ++
Sbjct: 158 LGWVN-------TKTPEQTEEELKKILDPNLWGPVNGSMVEFGKQICRPISPKCEECFLT 210
Query: 206 EYCPSAFKE 214
C FKE
Sbjct: 211 ACC-KYFKE 218
>gi|323456037|gb|EGB11904.1| hypothetical protein AURANDRAFT_14212, partial [Aureococcus
anophagefferens]
Length = 218
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 108/192 (56%), Gaps = 5/192 (2%)
Query: 7 VYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD 65
V S+G ++ D ++RR+ L+S +LSS TKD V + +L+ GL + +D
Sbjct: 25 VDSMGCEKLADPDASDEDRRYHTLVSLMLSSQTKDTVNAATMAKLVARGLSVSSILDDVP 84
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E ++I V F+ K ++ + G +P ++D+LLALPG+GPKMA +V+
Sbjct: 85 EDEFHEMIKGVGFHNVKTKTIRAATLKLREDHGGAVPGTMDDLLALPGVGPKMALLVLKC 144
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQK----TSSPEQTREALQRWLPKEEWVRIN 181
+ G+ VDTHVHRICN+LGW T K T PE+TR A++ W+P+ W +N
Sbjct: 145 AFGVTAGVSVDTHVHRICNQLGWTGGAPTTDKANFATKDPEKTRRAVESWMPRAIWGDVN 204
Query: 182 PLLVGFGQTICT 193
LLVG GQ + T
Sbjct: 205 WLLVGLGQEVQT 216
>gi|206602825|gb|EDZ39306.1| Putative endonuclease III [Leptospirillum sp. Group II '5-way CG']
Length = 210
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+ +LS TKD V A QRL + ++ + + + I+ LI+PV FY KA
Sbjct: 28 YNVLIMTILSLRTKDSVTMPASQRLFEKA-PDLPSLSQMEISDIESLIFPVGFYRTKAKT 86
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K IA+ LT+++G IP +L+ LL+LPG+G K AN+V+T+G F +G CVD HVHRI NR
Sbjct: 87 IKTIAERVLTEFEGKIPETLEGLLSLPGVGLKTANLVLTVG-FEKEGFCVDIHVHRILNR 145
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G + +T SP++T ++ LP++ R N LLV FGQ C P+ P C +C +
Sbjct: 146 WGVI-------QTHSPDETYRIVEPVLPRKWKRRANALLVSFGQHFCRPVSPFCSVCPLL 198
Query: 206 EYC 208
C
Sbjct: 199 PDC 201
>gi|312073211|ref|XP_003139418.1| hypothetical protein LOAG_03833 [Loa loa]
Length = 130
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 89/130 (68%), Gaps = 7/130 (5%)
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
+KA +KK+AKI +YDGDIP++++EL +LPG+G KMA + M W ++G+ VDTHVH
Sbjct: 1 KKALYIKKVAKILKERYDGDIPNTIEELCSLPGVGEKMAYLAMCNAWDQMKGLGVDTHVH 60
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI NRLGW+ KTS+P+++R AL+ +P+EEW +N LLVGFGQ C P+ P+C
Sbjct: 61 RISNRLGWI-------KTSNPKESRIALEALVPREEWQELNKLLVGFGQQTCLPVLPKCS 113
Query: 201 MCTVSEYCPS 210
C C +
Sbjct: 114 ECLNRNICAA 123
>gi|297619394|ref|YP_003707499.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus voltae A3]
gi|297378371|gb|ADI36526.1| DNA-(apurinic or apyrimidinic site) lyase [Methanococcus voltae A3]
Length = 366
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
+R F +LLS ++S+ TKD+ +++ + + T E + D ++++++P FY K
Sbjct: 40 QRAFKILLSTVISARTKDETTAKVSKKIF-DRIKTPEDLINIDITELEEIVHPAGFYKTK 98
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
+ N+KK+ Y+ +P++++EL+ L G+G K AN+V++L F+ ICVDTHVHRI
Sbjct: 99 SKNLKKLGTQLKEDYNNKVPNTVEELVKLAGVGRKTANLVVSLA-FDNYAICVDTHVHRI 157
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
CNR +V+ T PE+T + L++ LPK+ W IN LV +GQ +C+P P+C +C
Sbjct: 158 CNRWNYVS-------TDFPEETEQELRKKLPKKYWKSINNSLVVYGQDVCSPT-PKCNLC 209
Query: 203 --TVSEYCPSAFKESSTSSS 220
+ CP K ++ S
Sbjct: 210 YEEIKSICPHYSKLNTLKDS 229
>gi|239614218|gb|EEQ91205.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis ER-3]
Length = 415
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 92/159 (57%), Gaps = 9/159 (5%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGP 116
T E I + + +LI V F+ K +K A I +Y+ DIP + + L+ LPG+GP
Sbjct: 228 TLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPGVGP 287
Query: 117 KMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEE 176
KMA + M+ W +GI VD HVHRI N GW KT +PE+TR AL+ WLPK++
Sbjct: 288 KMAYLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRAALESWLPKDK 340
Query: 177 WVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFK 213
W +N LLVG GQT+C P+ RCG C + + C S K
Sbjct: 341 WHEVNKLLVGLGQTVCLPVARRCGECELAGTGLCKSEIK 379
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 10/63 (15%)
Query: 6 PVYSLGVDE---TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
PV ++G + DSS P++RRF +L++ +LSS TKD V A+QR LHT A +
Sbjct: 69 PVDTMGCSQLYWRDSS--PRDRRFHILIALMLSSQTKDTVTAIAMQR-----LHTELAPE 121
Query: 63 KAD 65
+A+
Sbjct: 122 QAN 124
>gi|261204483|ref|XP_002629455.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis SLH14081]
gi|239587240|gb|EEQ69883.1| DNA repair protein Ntg1 [Ajellomyces dermatitidis SLH14081]
Length = 416
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 92/159 (57%), Gaps = 9/159 (5%)
Query: 57 TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGP 116
T E I + + +LI V F+ K +K A I +Y+ DIP + + L+ LPG+GP
Sbjct: 229 TLENILAVSPSRLNELIRTVGFHNNKTKYIKAAAVILRDEYNSDIPPTAEGLMRLPGVGP 288
Query: 117 KMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEE 176
KMA + M+ W +GI VD HVHRI N GW KT +PE+TR AL+ WLPK++
Sbjct: 289 KMAYLCMSSAWGRDEGIGVDVHVHRITNLWGW-------HKTKTPEETRAALESWLPKDK 341
Query: 177 WVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSAFK 213
W +N LLVG GQT+C P+ RCG C + + C S K
Sbjct: 342 WHEVNKLLVGLGQTVCLPVARRCGECELAGTGLCKSEIK 380
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 10/63 (15%)
Query: 6 PVYSLGVDE---TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAID 62
PV ++G + DSS P++RRF +L++ +LSS TKD V A+QR LHT A +
Sbjct: 69 PVDTMGCSQLYWRDSS--PRDRRFHILIALMLSSQTKDTVTAIAMQR-----LHTELAPE 121
Query: 63 KAD 65
+A+
Sbjct: 122 QAN 124
>gi|289193061|ref|YP_003459002.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus sp.
FS406-22]
gi|288939511|gb|ADC70266.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus sp.
FS406-22]
Length = 344
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 118/186 (63%), Gaps = 12/186 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S ++S+ TKD+V + +RL + + + + DE + +LIYP FY KA N
Sbjct: 27 FKVLVSTIISARTKDEVTEEVSKRLFKE-IKDVDDLLNIDEEKLSNLIYPAGFYKNKAKN 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+AKI Y+G +P SL+ELL LPG+G K AN+V+TL FN GICVDTHVHRICNR
Sbjct: 86 LKKLAKILKENYNGRVPDSLEELLKLPGVGRKTANLVITLA-FNKDGICVDTHVHRICNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC--T 203
V T +PE+T L++ LPK+ W IN LLV FG+ IC+P +P+C C
Sbjct: 145 WEIVD-------TETPEETEFELRKKLPKKYWKVINNLLVVFGREICSP-KPKCDKCFEE 196
Query: 204 VSEYCP 209
+ E CP
Sbjct: 197 IREKCP 202
>gi|16082555|ref|NP_394252.1| endonuclease III [Thermoplasma acidophilum DSM 1728]
Length = 217
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 10/196 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD+ D A + L + + + AD + +I V F+ K+
Sbjct: 32 FWMLITTVLSQRTKDETTDEAARSLYEK-YRDIDGLADADPDEVGRIISKVGFWRVKSRK 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +IA+I +Y+ +P S+DEL++LPG+G K A +V+ G FN I VDTHV RI +R
Sbjct: 91 VVEIARIIRDRYNYRVPDSIDELVSLPGVGLKTAKVVLAEG-FNRPAIAVDTHVFRISHR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+GW +PE+T E L+R +P + V NP++V FG+ IC P+RP C C VS
Sbjct: 150 IGW-------SSARTPEETSEELERIIPVDLQVGFNPMMVEFGKAICRPVRPLCDRCPVS 202
Query: 206 EYCPSAFKESSTSSSK 221
EYC ++E S K
Sbjct: 203 EYC-RYYEEKVKDSEK 217
>gi|45185964|ref|NP_983680.1| ACR278Wp [Ashbya gossypii ATCC 10895]
gi|44981754|gb|AAS51504.1| ACR278Wp [Ashbya gossypii ATCC 10895]
Length = 367
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 117/214 (54%), Gaps = 16/214 (7%)
Query: 3 TLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH------ 56
TL Y + D+ + P R +L++ +LS+ TKD+ A+ L+ ++
Sbjct: 111 TLNEKYGILKDQ----IKPLHYRLQLLVALMLSAQTKDETNAIAMNNLMDYCMNNIGIKE 166
Query: 57 --TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGI 114
T EA+ + +E + LI+PV F+ +KA +K+ + ++ GD+P++++ +LPG+
Sbjct: 167 GITLEALLQIEEKQLDTLIHPVGFHRKKAAYIKRAMPMLQEEFGGDVPTTIEGFNSLPGV 226
Query: 115 GPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
G K+ + + W V GI VD HV R+ WV +K +PE TR+AL+ W+P+
Sbjct: 227 GNKIGFLALQKSWGIVAGIGVDVHVDRLSKMWRWVDA----KKCKTPEHTRKALEEWVPR 282
Query: 175 EEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
E W INPLLVGFGQ IC RC +C ++ C
Sbjct: 283 ELWNEINPLLVGFGQVICPSRGKRCDLCLANDIC 316
>gi|10640069|emb|CAC11921.1| endonuclease III related protein [Thermoplasma acidophilum]
Length = 197
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 10/196 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS TKD+ D A + L + + + AD + +I V F+ K+
Sbjct: 12 FWMLITTVLSQRTKDETTDEAARSLYEK-YRDIDGLADADPDEVGRIISKVGFWRVKSRK 70
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +IA+I +Y+ +P S+DEL++LPG+G K A +V+ G FN I VDTHV RI +R
Sbjct: 71 VVEIARIIRDRYNYRVPDSIDELVSLPGVGLKTAKVVLAEG-FNRPAIAVDTHVFRISHR 129
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+GW +PE+T E L+R +P + V NP++V FG+ IC P+RP C C VS
Sbjct: 130 IGW-------SSARTPEETSEELERIIPVDLQVGFNPMMVEFGKAICRPVRPLCDRCPVS 182
Query: 206 EYCPSAFKESSTSSSK 221
EYC ++E S K
Sbjct: 183 EYC-RYYEEKVKDSEK 197
>gi|219119818|ref|XP_002180661.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408134|gb|EEC48069.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 101/174 (58%), Gaps = 7/174 (4%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP 75
D + P++ RF VL+S +LSS TKD A++ + + + E+I D + + I
Sbjct: 33 DRTQTPRDFRFQVLISLMLSSQTKDATVGEAIRSMQKANVLNVESIVAMDASELNSYINK 92
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
V F+ K +K+ +I K+D DIP + ++ LPG+GPKMA + + W GI V
Sbjct: 93 VGFHNNKTKFIKQTVEILKEKFDNDIPPTASIMMELPGVGPKMAYICENVAWNRQTGIGV 152
Query: 136 DTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
DTH+HR+ N L WV K+++PEQTR L+ WLP+++W +N L VGFGQ
Sbjct: 153 DTHMHRLFNALNWV-------KSNTPEQTRVQLESWLPRDKWAEVNLLWVGFGQ 199
>gi|323306155|gb|EGA59887.1| Ntg1p [Saccharomyces cerevisiae FostersB]
Length = 249
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 101/167 (60%), Gaps = 12/167 (7%)
Query: 33 LLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIKDLIYPVAFYTRKAC 84
+LSS TKD+V A+ +++ + LH T EA+ + +E + +LI+ V F+TRKA
Sbjct: 1 MLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAK 60
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+ KI ++ D+P++++ELL LPG+GPKMA + + W ++GICVD HV R+
Sbjct: 61 YILSTCKILQDQFSSDVPATINELLXLPGVGPKMAYLTLQKAWGKIEGICVDVHVDRLTK 120
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
WV QK +P+QTR LQ WLPK W IN LLVGFGQ I
Sbjct: 121 LWKWV----DXQKCKTPDQTRTQLQNWLPKGLWTEINXLLVGFGQII 163
>gi|323356328|gb|EGA88130.1| Ntg1p [Saccharomyces cerevisiae VL3]
Length = 249
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 101/167 (60%), Gaps = 12/167 (7%)
Query: 33 LLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIKDLIYPVAFYTRKAC 84
+LSS TKD+V A+ +++ + LH T EA+ + +E + +LI+ V F+TRKA
Sbjct: 1 MLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDELIHSVGFHTRKAK 60
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+ KI ++ D+P++++ELL LPG+GPKMA + + W ++GICVD HV R+
Sbjct: 61 YILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKIEGICVDVHVDRLTK 120
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
WV QK +P+QTR LQ WLPK W IN LLVGFGQ I
Sbjct: 121 LWKWV----DAQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQII 163
>gi|410478975|ref|YP_006766612.1| EndoIII-related endonuclease [Leptospirillum ferriphilum ML-04]
gi|406774227|gb|AFS53652.1| putative EndoIII-related endonuclease [Leptospirillum ferriphilum
ML-04]
Length = 225
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+ +LS TKD V A QRL + ++ + + I+ LI+PV FY KA
Sbjct: 43 YDVLIMTILSLRTKDSVTIPASQRLFEKA-PDLPSLSQMKISDIESLIFPVGFYRTKAKT 101
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K IA+ LT++ G IP +L+ LL+LPG+G K AN+V+T+G F +G CVD HVHRI NR
Sbjct: 102 IKTIAERVLTEFGGKIPDTLEGLLSLPGVGLKTANLVLTVG-FEKEGFCVDIHVHRILNR 160
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G + +T SP++T ++ LP++ R N LLV FGQ C P+ P C +C +
Sbjct: 161 WGVI-------QTHSPDETYHIVEPVLPRKWKRRANALLVAFGQHFCRPVSPFCSVCPLL 213
Query: 206 EYC 208
C
Sbjct: 214 PDC 216
>gi|374106887|gb|AEY95796.1| FACR278Wp [Ashbya gossypii FDAG1]
Length = 367
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 117/214 (54%), Gaps = 16/214 (7%)
Query: 3 TLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH------ 56
TL Y + D+ + P R +L++ +LS+ TKD+ A+ L+ ++
Sbjct: 111 TLNEKYGILKDQ----IKPLHYRLQLLVALMLSAQTKDETNAIAMNNLMDYCMNNIGIKE 166
Query: 57 --TAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGI 114
T EA+ + +E + LI+PV F+ +KA +K+ + ++ GD+P++++ +LPG+
Sbjct: 167 GITLEALLQIEEKQLDMLIHPVGFHRKKAAYIKRAMPMLQEEFGGDVPTTIEGFNSLPGV 226
Query: 115 GPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
G K+ + + W V GI VD HV R+ WV +K +PE TR+AL+ W+P+
Sbjct: 227 GNKIGFLALQKSWGIVAGIGVDVHVDRLSKMWRWVDA----KKCKTPEHTRKALEEWVPR 282
Query: 175 EEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
E W INPLLVGFGQ IC RC +C ++ C
Sbjct: 283 ELWNEINPLLVGFGQVICPSRGKRCDLCLANDIC 316
>gi|424869508|ref|ZP_18293209.1| Putative endonuclease III [Leptospirillum sp. Group II 'C75']
gi|124514281|gb|EAY55795.1| putative endonuclease III [Leptospirillum rubarum]
gi|387220626|gb|EIJ75278.1| Putative endonuclease III [Leptospirillum sp. Group II 'C75']
Length = 210
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 108/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+ +LS TKD V A QRL + ++ + + I+ LI+PV FY KA
Sbjct: 28 YDVLIMTILSLRTKDSVTIPASQRLFEKA-PDLPSLSQMKISDIESLIFPVGFYRTKAKT 86
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K IA+ LT++ G IP +L+ LL+LPG+G K AN+V+T+G F +G CVD HVHRI NR
Sbjct: 87 IKTIAERVLTEFGGKIPDTLEGLLSLPGVGLKTANLVLTVG-FEKEGFCVDIHVHRILNR 145
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G + +T SP++T ++ LP++ R N LLV FGQ C P+ P C +C +
Sbjct: 146 WGVI-------QTHSPDETYHIVEPVLPRKWKRRANALLVAFGQHFCRPVSPFCSVCPLL 198
Query: 206 EYC 208
C
Sbjct: 199 PDC 201
>gi|340345847|ref|ZP_08668979.1| DNA-(Apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339520988|gb|EGP94711.1| DNA-(Apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 217
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F++L+ +LS+ TKD+ A+ ++L + T + + A I+ +I + FY K+
Sbjct: 36 FSILIGTILSARTKDETTTKAV-KMLFSKYKTPKELANAKVKDIEKIIRSIGFYHVKSRR 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++KI +KY G +P +LDEL+ LPG+G K AN V+ F+ I VD HVHRI NR
Sbjct: 95 IIEVSKIIDSKYSGIVPDTLDELIQLPGVGRKTANCVLVYA-FDKPAIPVDIHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T SPE+T L + +PK+ W++IN V +GQ IC P+ P C +C +
Sbjct: 154 LGLVN-------TKSPEETELVLMKKIPKKYWIKINDTFVMYGQNICKPINPMCNVCKIK 206
Query: 206 EYC 208
+ C
Sbjct: 207 KNC 209
>gi|303284701|ref|XP_003061641.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456971|gb|EEH54271.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 192
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 103/188 (54%), Gaps = 6/188 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
F L++ LLS +D VA A+ RL G A+ A TI+D + + KA
Sbjct: 9 FQALVATLLSVQCRDGVALRAMTRLRDALGGQCVVAAVTAATRETIEDAVSCCNYKRTKA 68
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+K++A K+ G +P ++ EL LPG+GPK+A++V ++ + G+ VD HV R+
Sbjct: 69 RYVKEVAAAIRAKHRGVVPRTVVELKTLPGVGPKIAHLVASVAFGEASGVVVDAHVRRVA 128
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
+RLGW T ++ S E TR ++ WLP+EEW R L+ GQ C +PRCG C
Sbjct: 129 SRLGWTTDAESR----SAEATRARMEEWLPREEWERATLALIAHGQETCDARKPRCGECA 184
Query: 204 VSEYCPSA 211
V+ CPSA
Sbjct: 185 VANACPSA 192
>gi|42557689|emb|CAF28664.1| putative endonuclease III [uncultured crenarchaeote]
Length = 219
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +LS+ T+D+ L+ L + + I KA+ I+D I+ + FY KA
Sbjct: 39 FKILIGTILSARTRDENTTRVLKYLF-DKFRDIDGISKAELKDIRDSIHSIGFYNIKAKR 97
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++ ++ + K+D +PS+L+ELL LPG+G K AN V+ FN I VD HVHRI NR
Sbjct: 98 IKQVVQLLIEKFDSKVPSNLEELLTLPGVGRKTANCVLVYA-FNQPAIPVDVHVHRISNR 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T E+T L + KE W+ +N V +GQ +C P++P+C +C +
Sbjct: 157 LGIVN-------TRKVEETELELCNIIDKEMWIEVNDTFVTYGQNVCLPIKPKCNICQLK 209
Query: 206 EYC 208
+ C
Sbjct: 210 KMC 212
>gi|288932565|ref|YP_003436625.1| DNA-(apurinic or apyrimidinic site) lyase [Ferroglobus placidus DSM
10642]
gi|288894813|gb|ADC66350.1| DNA-(apurinic or apyrimidinic site) lyase [Ferroglobus placidus DSM
10642]
Length = 213
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+SA+LS+ T+D+ A +RL + + T E + + I+ LI V FY KA
Sbjct: 30 FKILVSAILSTRTRDEATIEASERLFRV-VKTPEDLARMKVEEIEKLIRGVGFYREKAKK 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+ +I + +++ +P L++LL LPG+G K+AN+V+ F + I VDTHVHRI NR
Sbjct: 89 LKKLGEILVKEFNSRVPDKLEDLLKLPGVGRKVANVVLAEA-FGKEAIAVDTHVHRISNR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V ++ ++ +PK+ W R+N +VGFGQTIC P++P+C C +
Sbjct: 148 LGLVETKTPEETEEELKKI-------VPKKYWRRVNKAMVGFGQTICKPIKPKCNECKLV 200
Query: 206 EYC 208
E C
Sbjct: 201 EIC 203
>gi|288560832|ref|YP_003424318.1| endonuclease III Nth [Methanobrevibacter ruminantium M1]
gi|288543542|gb|ADC47426.1| endonuclease III Nth [Methanobrevibacter ruminantium M1]
Length = 215
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+ +LS T+D+ D A L + A+ A +++LI P FY KA
Sbjct: 34 YKVLIRTILSQRTRDENTDQAANALFE-VYPDIYAVADAPVEHVQELIKPAGFYRVKAAR 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++++I + +Y G++P +DE+L LPG+G K AN V+ F I VDTHVHRI NR
Sbjct: 93 ILEVSRILIDQYGGEVPREMDEMLKLPGVGRKTANCVIVFA-FQDAAIPVDTHVHRISNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G T PE+T + L +PK+ WV +N L+V FGQTIC P+ P+C C +S
Sbjct: 152 WGIA-------DTKDPEETEQVLMEKVPKDLWVDLNDLMVQFGQTICRPIGPQCDKCPIS 204
Query: 206 EYC 208
+ C
Sbjct: 205 DLC 207
>gi|254168035|ref|ZP_04874883.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|289596043|ref|YP_003482739.1| DNA-(apurinic or apyrimidinic site) lyase [Aciduliprofundum boonei
T469]
gi|197623078|gb|EDY35645.1| base excision DNA repair protein, HhH-GPD family [Aciduliprofundum
boonei T469]
gi|289533830|gb|ADD08177.1| DNA-(apurinic or apyrimidinic site) lyase [Aciduliprofundum boonei
T469]
Length = 211
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 14/203 (6%)
Query: 17 SSLPPKERR----FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL 72
+++PP + F VL++ ++S TKD+V ++L + A I L
Sbjct: 16 ANVPPHPYKSREPFKVLIATVISQRTKDEVTYTVAEKLF-GKYPLPRDLKNAPTDDIAHL 74
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
IYP FY +KA +K+IAKI YDG +P +L+ELL LPG+G K AN+V++ ++
Sbjct: 75 IYPAGFYKQKAKKIKEIAKIIDEDYDGKVPDNLEELLKLPGVGRKTANIVLS-RCYDKDV 133
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VDTHVHRI NRLGWV T +PE+T L + L K+ W IN LLV FG+TIC
Sbjct: 134 IAVDTHVHRISNRLGWVN-------TKTPEETERELMKVLLKKYWKDINELLVMFGRTIC 186
Query: 193 TPLRPRCGMCTVSEYCPSAFKES 215
P+ P+C +C + +YC +KE+
Sbjct: 187 RPVAPKCDVCPIKKYC-KYYKEN 208
>gi|304314918|ref|YP_003850065.1| endonuclease III [Methanothermobacter marburgensis str. Marburg]
gi|302588377|gb|ADL58752.1| endonuclease III [Methanothermobacter marburgensis str. Marburg]
Length = 215
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 112/208 (53%), Gaps = 16/208 (7%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
M+ L +YSL V E + VL+ +LS T+D+ D A RL T E
Sbjct: 11 MEGLRSLYSLRVFEDRDP-------YRVLIRTILSQRTRDENTDEATARLFSE-YPTMED 62
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ A ++ L+ FY KA ++++++I L +Y G +P +DELL LPG+G K AN
Sbjct: 63 VAYAPVEKLEQLVRKAGFYHVKARRIREVSRILLEEYGGRVPDDIDELLKLPGVGRKTAN 122
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
V+ FN + VDTHVHRI NR+G V T +PE+T L +P++ W+ +
Sbjct: 123 CVLVYA-FNKPVVPVDTHVHRISNRIGLVN-------TRTPEETERVLMEVIPRKYWIEL 174
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N L+V FGQ IC P+ PR C +++ C
Sbjct: 175 NDLMVQFGQDICRPVGPRHEECPIADEC 202
>gi|408403428|ref|YP_006861411.1| endonuclease III [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364024|gb|AFU57754.1| putative endonuclease III [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 223
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 106/183 (57%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +LS+ T+D+ + +L T + + AD IK +I+ + FY KA
Sbjct: 35 FKILIGTILSARTRDENTTRVVNKLFAR-FKTPQDLASADIDEIKKIIHSIGFYNIKAER 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+++++ ++K+ G +PS +D LL LPG+G K AN V+ F+ I VD HVHRI NR
Sbjct: 94 IKQVSQMLISKFGGRVPSDIDSLLKLPGVGRKTANCVLVYA-FDKPAIPVDVHVHRISNR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V+ T +PEQT + L + + ++ W ++N V +GQ IC P+RP C C +
Sbjct: 153 LGLVS-------TKTPEQTEQDLSKLVDRKLWTKVNDTFVMYGQNICLPVRPNCKACDLK 205
Query: 206 EYC 208
+ C
Sbjct: 206 KMC 208
>gi|327401491|ref|YP_004342330.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus veneficus
SNP6]
gi|327316999|gb|AEA47615.1| DNA-(apurinic or apyrimidinic site) lyase [Archaeoglobus veneficus
SNP6]
Length = 211
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 107/184 (58%), Gaps = 11/184 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+ A+LSS T+D+ ++L + + E + I+ LI V FY KA
Sbjct: 32 FQHLVFAVLSSRTRDEQTAKVAKKLFER-VKKPEDLATMPVEEIERLIRGVGFYRVKARK 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++AK+ + G +P + DEL+ LPG+G K AN+V+ F I VDTHVHR+ NR
Sbjct: 91 LKELAKVLVEM--GSVPDTYDELVKLPGVGRKTANVVLASA-FGKAAIGVDTHVHRVSNR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V +T PE+T L++ +P+E W R+N +VGFGQT+C PL+P C C +
Sbjct: 148 MGLV-------RTKKPEETENELKKIIPRELWTRVNRAMVGFGQTVCRPLKPLCDECPFT 200
Query: 206 EYCP 209
++CP
Sbjct: 201 DWCP 204
>gi|410721172|ref|ZP_11360516.1| putative endoIII-related endonuclease [Methanobacterium sp.
Maddingley MBC34]
gi|410599623|gb|EKQ54169.1| putative endoIII-related endonuclease [Methanobacterium sp.
Maddingley MBC34]
Length = 213
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
M+ L+ Y L V E + VL+ +LS T+D D A +L + HT
Sbjct: 11 MERLQQQYDLRVFEDGDP-------YRVLIRTILSQRTRDDNTDRASAQLF-SKYHTMAE 62
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I +AD A ++ LI P FY KA + ++++ ++ G +P + LL LPG+G K AN
Sbjct: 63 IAEADPALLEPLIRPAGFYHVKAQRIVEVSRKLQDEFKGQVPDYMKGLLELPGVGRKTAN 122
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
V+ G F I VD HVHRI NRLG V T PE+T L++ +P+E W+ +
Sbjct: 123 CVLVYG-FQKPAIPVDVHVHRISNRLGLVD-------TKHPEETEAELEKLVPREYWIEL 174
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N L+V FGQTIC P PR C + E C
Sbjct: 175 NDLMVQFGQTICRPQSPRHEECPLQELC 202
>gi|406893678|gb|EKD38677.1| hypothetical protein ACD_75C00647G0002 [uncultured bacterium]
Length = 500
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/187 (40%), Positives = 110/187 (58%), Gaps = 10/187 (5%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F VL++ +LS+ TKD+ A RL + E++ + EA I LIYPV F K
Sbjct: 32 EDPFKVLVATILSARTKDETTAAASTRLFEVA-PDLESLARLPEAEIARLIYPVGFSKTK 90
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A ++ + + L + G +P +++EL+ LPG+G K AN+V T+ F ICVDTHVHRI
Sbjct: 91 AKHLALLPE-ALRSFGGKVPETIEELITLPGVGRKTANLVRTVA-FRKPAICVDTHVHRI 148
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
N +V +T +P +T AL+ LP+E W+ +N LLV FGQ+IC P+ P+C +C
Sbjct: 149 MNIWEYV-------RTDTPLKTEMALRAKLPEEHWLSVNSLLVAFGQSICRPVGPKCDIC 201
Query: 203 TVSEYCP 209
+ CP
Sbjct: 202 PLLPECP 208
>gi|256810186|ref|YP_003127555.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
fervens AG86]
gi|256793386|gb|ACV24055.1| DNA-(apurinic or apyrimidinic site) lyase [Methanocaldococcus
fervens AG86]
Length = 344
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 120/186 (64%), Gaps = 12/186 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S ++S+ TKD+V + ++L + + + + + +E + DLIYP FY KA N
Sbjct: 27 FKVLVSTIISARTKDEVTEEVSKKLFKE-VKSVDDLLNIEEEKLADLIYPAGFYRVKAKN 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+AKI KY+G +P SL+ELL LPG+G K AN+V+TL F+ GICVDTHVHRICNR
Sbjct: 86 LKKLAKILKEKYNGKVPDSLEELLKLPGVGRKTANLVITLA-FDKDGICVDTHVHRICNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC--T 203
V T +PE+T L++ LPK+ W IN LLV FG+ IC+P +P+C C
Sbjct: 145 WEIVD-------TETPEETEFELRKKLPKKYWKVINNLLVVFGKEICSP-KPKCNKCFEE 196
Query: 204 VSEYCP 209
+ + CP
Sbjct: 197 IRKKCP 202
>gi|406909226|gb|EKD49522.1| hypothetical protein ACD_63C00115G0009 [uncultured bacterium]
Length = 220
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 109/183 (59%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL++ ++S KD+ + + R+ ++ +AD +++ ++ P F+ +K+ +
Sbjct: 32 YKVLIATIVSQRVKDETTE-KISRIFFEKYPDVRSLARADLNSLRKILKPAGFFRQKSKH 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K +A+ L KY+G++P +L EL+ LPG+G K AN V+ + + I VDTHVHRI NR
Sbjct: 91 IKSVAETLLKKYNGNVPRNLPELVKLPGVGRKTANCVLVYA-YKLPAIPVDTHVHRISNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V +T +PE+T AL + +PK W+ +N LLV G+ C P P+C C V+
Sbjct: 150 IGLV-------RTKAPEETEFALMKTVPKRYWIDMNRLLVLHGKKTCLPRGPKCDSCVVA 202
Query: 206 EYC 208
EYC
Sbjct: 203 EYC 205
>gi|306490881|gb|ADM94999.1| predicted EndoIII-related endonuclease [uncultured candidate
division JS1 bacterium]
Length = 146
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 89/143 (62%), Gaps = 8/143 (5%)
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E I LIYPV FY KA N+KKIA I L KY G +P +L++L+ LPG+G K AN+V+ +
Sbjct: 3 EEEIIYLIYPVGFYRIKAKNIKKIANILLEKYGGMVPDNLNDLIQLPGVGRKTANLVLGI 62
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
F+ I VDTHVHRI NRLG V KTS+P++T L LP++ W+ N LV
Sbjct: 63 A-FHRNTITVDTHVHRISNRLGIV-------KTSNPKETELDLMMILPQKYWICFNTYLV 114
Query: 186 GFGQTICTPLRPRCGMCTVSEYC 208
GQ IC P+ P+C C + YC
Sbjct: 115 AHGQKICNPIIPKCSQCKIMPYC 137
>gi|402589187|gb|EJW83119.1| hypothetical protein WUBG_05972, partial [Wuchereria bancrofti]
Length = 130
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 88/130 (67%), Gaps = 7/130 (5%)
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
+KA +KK+A+I +YDGDIP++++ L +LPG+G KMA + M W ++G+ VDTHVH
Sbjct: 1 KKAVYIKKVAEILKERYDGDIPNTVEGLCSLPGVGEKMAYLAMCTAWDQLEGLGVDTHVH 60
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI NRLGW+ KTS+P+++R AL+ +P+E+W +N LLVGFGQ C P+ P+C
Sbjct: 61 RISNRLGWI-------KTSNPKESRVALEALVPREQWQELNKLLVGFGQQTCLPVLPKCS 113
Query: 201 MCTVSEYCPS 210
C C +
Sbjct: 114 ECLNKNICAA 123
>gi|301122869|ref|XP_002909161.1| endonuclease III-like, HhH-GPD superfamily base excision DNA repair
enzyme, putative [Phytophthora infestans T30-4]
gi|262099923|gb|EEY57975.1| endonuclease III-like, HhH-GPD superfamily base excision DNA repair
enzyme, putative [Phytophthora infestans T30-4]
Length = 259
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 97/157 (61%), Gaps = 8/157 (5%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP 75
D ++PP R VL+SA+LSS TKD V A+ RL+++GL T + + + D+ + LI P
Sbjct: 96 DENIPPHVCRLHVLISAMLSSQTKDPVNAAAMGRLIKHGL-TVKTMLEIDQHDLAQLIRP 154
Query: 76 VAFYTRKACNMKKIAKICLTKYDG------DIPSSLDELLALPGIGPKMANMVMTLGWFN 129
V F+ KA +K+ I + + DIPS+ +EL+ALPG+GPKMA +VM W N
Sbjct: 155 VGFFNYKAKYIKQTVLILSKQAEAEGKDVVDIPSTYEELIALPGVGPKMATLVMNCAWKN 214
Query: 130 VQGICVDTHVHRICNRLGWV-TQPGTKQKTSSPEQTR 165
GICVDTHVHRI NRL WV T K+ PE+TR
Sbjct: 215 TVGICVDTHVHRISNRLKWVKTWNKNNPKSQDPEKTR 251
>gi|348675883|gb|EGZ15701.1| hypothetical protein PHYSODRAFT_561415 [Phytophthora sojae]
Length = 275
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 100/158 (63%), Gaps = 10/158 (6%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP 75
D S PP RF VL++A++SS TKD V A+ L+++GL T E++ + D+ + LI P
Sbjct: 111 DESFPPHVCRFHVLIAAMMSSQTKDPVNAAAMGCLIKHGL-TIESMLEIDQQELAQLIRP 169
Query: 76 VAFYTRKACNMKKIAKICLTK---YDG----DIPSSLDELLALPGIGPKMANMVMTLGWF 128
V F+ KA +K+ A I LTK +G DIPS+ + L+ALPG+GPKMA +VM W
Sbjct: 170 VGFFNHKAKYIKQTAAI-LTKQAEVEGKDVVDIPSTYEGLIALPGVGPKMATLVMNCAWN 228
Query: 129 NVQGICVDTHVHRICNRLGWV-TQPGTKQKTSSPEQTR 165
N GICVDTHVHRI NRL WV T K+ PE+TR
Sbjct: 229 NTVGICVDTHVHRISNRLKWVKTWNKNNPKSQDPEKTR 266
>gi|15668794|ref|NP_247597.1| endonuclease III [Methanocaldococcus jannaschii DSM 2661]
gi|3915935|sp|Q58030.2|Y613_METJA RecName: Full=Putative endonuclease MJ0613
gi|2826298|gb|AAB98606.1| endonuclease III (nth1) [Methanocaldococcus jannaschii DSM 2661]
Length = 344
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 116/186 (62%), Gaps = 12/186 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S ++S+ TKD+V + ++L + + + + DE + DLIYP FY KA N
Sbjct: 27 FKVLISTIISARTKDEVTEEVSKKLFKE-IKDVDDLLNIDEEKLADLIYPAGFYKNKAKN 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+AKI Y+G +P SL+ELL LPG+G K AN+V+TL FN GICVDTHVHRICNR
Sbjct: 86 LKKLAKILKENYNGKVPDSLEELLKLPGVGRKTANLVITLA-FNKDGICVDTHVHRICNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC--T 203
V T +PE+T L++ LPK+ W IN LLV FG+ IC+ + +C C
Sbjct: 145 WEIVD-------TETPEETEFELRKKLPKKYWKVINNLLVVFGREICSS-KSKCDKCFKE 196
Query: 204 VSEYCP 209
+ E CP
Sbjct: 197 IKEKCP 202
>gi|403215722|emb|CCK70221.1| hypothetical protein KNAG_0D04820 [Kazachstania naganishii CBS
8797]
Length = 443
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 101/192 (52%), Gaps = 12/192 (6%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLH--------TAEAIDKADEATIK 70
+ PK R VL+ +LSS TKD++ A+ ++++ + T A+ + DE T+
Sbjct: 158 IEPKTYRVQVLVGVMLSSQTKDEMTAKAMYNVMRHCIDSVGSVQGITVPALLQIDERTLD 217
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
LI V F+ RK+ + + +I Y GDIP + EL ALPG+GPKM + + W +
Sbjct: 218 SLISCVGFHQRKSNYILRTCQILEDSYGGDIPETAHELQALPGVGPKMTYLTLQKAWGKM 277
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
GICVD HV R C WV + +P+ TR ALQ WLP W IN LLVG GQ
Sbjct: 278 DGICVDVHVDRFCKLFKWV----DPNRCKTPDMTRIALQEWLPLPLWSEINSLLVGMGQL 333
Query: 191 ICTPLRPRCGMC 202
I P R +C
Sbjct: 334 IDRPRANRVKIC 345
>gi|118577076|ref|YP_876819.1| EndoIII-related endonuclease [Cenarchaeum symbiosum A]
gi|118195597|gb|ABK78515.1| EndoIII-related endonuclease [Cenarchaeum symbiosum A]
Length = 277
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 109/199 (54%), Gaps = 13/199 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F++L+ +LS+ T+D+ ++ L T + +A ++ ++ P+ FY K+
Sbjct: 34 FSILIGTILSARTRDESTTKVVKELFAR-YKTPRELARARHRDVERIVKPIGFYRVKSRR 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++A+I TKY G +P L+ L+ LPG+G K AN V+ F I VD HVHRI NR
Sbjct: 93 IMEVARIIDTKYGGRVPDDLETLVGLPGVGRKTANCVLVYA-FEKPAIPVDIHVHRISNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T +PE+T AL + +PK W+ +N + V +GQ IC P+ P C +C +
Sbjct: 152 LGLV-------DTRTPEETEAALTKKVPKRHWLHVNDIFVMYGQNICKPVSPMCEVCGIR 204
Query: 206 EYCPSAFKESSTSSSKSKK 224
C K + S+S SK+
Sbjct: 205 SLC----KYYANSASLSKR 219
>gi|333987518|ref|YP_004520125.1| HhH-GPD family protein [Methanobacterium sp. SWAN-1]
gi|333825662|gb|AEG18324.1| HhH-GPD family protein [Methanobacterium sp. SWAN-1]
Length = 212
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 113/208 (54%), Gaps = 16/208 (7%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K L+ Y+L + E F VL+ +LS T+D+ D A L TA
Sbjct: 12 VKRLQEEYTLRIFEDSDP-------FRVLIRTILSQRTRDENTDAASASLFAR-YPTARL 63
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
I A I+ LI FY KA +K+++KI +YD +P + ELL+LPG+G K AN
Sbjct: 64 IADAPIENIEILIKKSGFYHVKAKRVKEVSKIIHEEYDDVVPDDMKELLSLPGVGRKTAN 123
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
V+ G F+ I VD HVHRI NR+G V T +PEQT L + +P++ W+ +
Sbjct: 124 CVLVYG-FHKDAIPVDVHVHRISNRIGLV-------DTKTPEQTEVELMKTVPRKYWLPL 175
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N LLV FGQTIC P+ P+ +C +++ C
Sbjct: 176 NDLLVQFGQTICRPIGPKHEICPIADLC 203
>gi|2127882|pir||E64376 endonuclease III - Methanococcus jannaschii
Length = 353
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 116/186 (62%), Gaps = 12/186 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S ++S+ TKD+V + ++L + + + + DE + DLIYP FY KA N
Sbjct: 36 FKVLISTIISARTKDEVTEEVSKKLFKE-IKDVDDLLNIDEEKLADLIYPAGFYKNKAKN 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+AKI Y+G +P SL+ELL LPG+G K AN+V+TL FN GICVDTHVHRICNR
Sbjct: 95 LKKLAKILKENYNGKVPDSLEELLKLPGVGRKTANLVITLA-FNKDGICVDTHVHRICNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC--T 203
V T +PE+T L++ LPK+ W IN LLV FG+ IC+ + +C C
Sbjct: 154 WEIVD-------TETPEETEFELRKKLPKKYWKVINNLLVVFGREICSS-KSKCDKCFKE 205
Query: 204 VSEYCP 209
+ E CP
Sbjct: 206 IKEKCP 211
>gi|167043370|gb|ABZ08073.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine crenarchaeote HF4000_ANIW141O9]
Length = 217
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 117/208 (56%), Gaps = 15/208 (7%)
Query: 11 GVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIK 70
G+ + +++ P F +L+ +LS+ T+D+ A++ L + +T + + A ++
Sbjct: 25 GLHQAETASP-----FKILIGTVLSARTRDENTTKAVKGLFK-VYNTPQKLANAKAKDVE 78
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+I V FY K+ + ++A I LTKY G +P+ +D+L+ +PG+G K AN V+ F
Sbjct: 79 KIIKSVGFYHVKSRRIIEVANIILTKYHGKVPADIDKLVEIPGVGRKTANCVLVYA-FEK 137
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQT 190
I VDTHVHRI NRLG V T +PE+T L++ +PK+ W+ IN V +GQ
Sbjct: 138 PAIPVDTHVHRISNRLGLV-------DTKTPEETEMELRKKVPKKYWLPINNTFVMYGQN 190
Query: 191 ICTPLRPRCGMCTVSEYCPSAFKESSTS 218
IC P+ P C +C + C + FK + S
Sbjct: 191 ICKPISPMCSVCKIRNSC-NYFKTKNAS 217
>gi|239618511|ref|YP_002941833.1| endonuclease III [Kosmotoga olearia TBF 19.5.1]
gi|239507342|gb|ACR80829.1| endonuclease III [Kosmotoga olearia TBF 19.5.1]
Length = 210
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 107/183 (58%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+S +LS T+D+ + A ++L + AI KA + +LI Y +KA
Sbjct: 27 YRVLVSTVLSQRTRDENTEVASKKLF-SVYPDVFAIAKAKPEDLYNLIKAAGMYRQKAER 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I+KI + Y+G +P +L+EL LPG+G K AN+V+ + F + VDTHVHRI NR
Sbjct: 86 IVEISKIIVETYNGKVPDTLEELTKLPGVGRKTANIVLNVS-FGKAALAVDTHVHRISNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW+ KT PEQ+ LQ+ LP+E W +N +V FG+ +C P+ P+C C ++
Sbjct: 145 LGWI-------KTKQPEQSEFELQKILPEELWGPLNGSMVEFGRRVCKPVNPQCNECPIN 197
Query: 206 EYC 208
C
Sbjct: 198 SCC 200
>gi|389844120|ref|YP_006346200.1| endonuclease III [Mesotoga prima MesG1.Ag.4.2]
gi|387858866|gb|AFK06957.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Mesotoga prima MesG1.Ag.4.2]
Length = 220
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 11/201 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS T+D+ + A +RL ID E + DLI Y +KA
Sbjct: 29 FKVLVSTILSQRTRDENTEEASRRLFSVYPDPQSLIDAKPE-DLYDLIKASGMYRQKAAR 87
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ A++ + + G +P +L+EL+ +PG+G K AN+V+ + F + + VDTHVHRI NR
Sbjct: 88 IINCARMIVESFAGVVPDTLEELVTIPGVGRKTANIVLNVS-FKKEALAVDTHVHRIANR 146
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +P+ T AL + LP W +N +V FG+ IC P+ P+C +C +S
Sbjct: 147 LGWV-------KTKTPDDTEFALMKILPPSIWGPVNGSMVEFGREICRPIGPKCNLCGIS 199
Query: 206 EYCP--SAFKESSTSSSKSKK 224
+ C S E +T K +K
Sbjct: 200 QCCEYFSLVSEQTTERQKQQK 220
>gi|407042592|gb|EKE41422.1| endonuclease III, putative [Entamoeba nuttalli P19]
Length = 241
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 110/204 (53%), Gaps = 9/204 (4%)
Query: 7 VYSLGVDETDSSLPPKERR-FAVLLSALLSSLTKDKVADGALQRLLQN-GLHTAEAIDKA 64
V G D+ S K+ + F + LS T+D++ ++++L + G + + I+
Sbjct: 38 VQEYGADQILSMCHNKDNKPFYAFIGTFLSPQTRDQITFASVKKLHETLGELSVDVINNT 97
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + I V FYT KA +K+ I +Y+ +P + +LLALPG+GPK+A+++++
Sbjct: 98 SLEVLINCIKGVGFYTTKAKRLKRCCVIMKEQYNNQVPQTKQQLLALPGVGPKIASLILS 157
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+G+ ++ + +DTHV I RLGW S+PE+ R L+ WLPKEEW N L
Sbjct: 158 IGFDRLESLAIDTHVFVISQRLGWA-------DGSTPEKVRLQLESWLPKEEWSLFNKSL 210
Query: 185 VGFGQTICTPLRPRCGMCTVSEYC 208
V FGQ C P+C C + + C
Sbjct: 211 VAFGQCCCRKTHPKCKQCPIQDKC 234
>gi|323310267|gb|EGA63457.1| Ntg1p [Saccharomyces cerevisiae FostersO]
Length = 314
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 12/171 (7%)
Query: 19 LPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ---NGLH-----TAEAIDKADEATIK 70
+ P++ R VLL +LSS TKD+V A+ +++ + LH T EA+ + +E +
Sbjct: 137 ISPRDYRLQVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLD 196
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
+LI+ V F+TRKA + KI ++ D+P++++ELL LPG+GPKMA + + W +
Sbjct: 197 ELIHSVGFHTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGKI 256
Query: 131 QGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
+GICVD HV R+ WV QK +P+QTR LQ WLPK W IN
Sbjct: 257 EGICVDVHVDRLTKLWKWVDX----QKCKTPDQTRTQLQNWLPKGLWTEIN 303
>gi|85000285|ref|XP_954861.1| endonuclease III [Theileria annulata strain Ankara]
gi|65303007|emb|CAI75385.1| endonuclease III, putative [Theileria annulata]
Length = 377
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 8/155 (5%)
Query: 20 PPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFY 79
P + F L+ +LSS TKD++ ++ L + GL T + I K DE + +I V F+
Sbjct: 227 PGENFEFQTLVGCMLSSQTKDEITAATMKNLKKRGL-TLDNIIKMDEEELDSIISKVGFH 285
Query: 80 TRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHV 139
KA N+KK+A+I +Y G +PS+ EL +LPGIGPKMAN+++ + + V G+ VD HV
Sbjct: 286 KTKAKNIKKVAQILKEQYGGKVPSNKKELESLPGIGPKMANLILQVAYNMVDGVAVDIHV 345
Query: 140 HRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
HRI NRLGWV KT +PE+T LQ LPK
Sbjct: 346 HRITNRLGWV-------KTKTPEETSLKLQELLPK 373
>gi|374635339|ref|ZP_09706940.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris formicicus
Mc-S-70]
gi|373562615|gb|EHP88824.1| DNA-(apurinic or apyrimidinic site) lyase [Methanotorris formicicus
Mc-S-70]
Length = 344
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 118/186 (63%), Gaps = 12/186 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+S +LS+ TKD+V + +RL + + + K D ++ LIYPV FY KA N
Sbjct: 27 FKVLISTILSARTKDEVTEEISKRLFGK-VRDVDDLLKIDLEKLEKLIYPVGFYKTKAKN 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+AK+ Y+G++P+ LDE+L LPG+G K AN+V+TL F+ GICVDTHVHRICNR
Sbjct: 86 LKKLAKVLKENYNGEVPNELDEILKLPGVGRKTANLVITLA-FDDYGICVDTHVHRICNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC--T 203
W T +PE+T L++ LPK+ W IN LLV FG+ +C+P P+C C
Sbjct: 145 --WEYVE-----TETPEETEMELRKKLPKKYWKIINNLLVVFGREVCSPT-PKCRKCFEE 196
Query: 204 VSEYCP 209
+ E CP
Sbjct: 197 IRERCP 202
>gi|167375600|ref|XP_001733691.1| endonuclease III [Entamoeba dispar SAW760]
gi|165905090|gb|EDR30183.1| endonuclease III, putative [Entamoeba dispar SAW760]
Length = 241
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 9/211 (4%)
Query: 7 VYSLGVDETDSSLPPKERR-FAVLLSALLSSLTKDKVADGALQRLLQN-GLHTAEAIDKA 64
V G D+ S K+ + F + LS T+D++ ++++L + G T + I+
Sbjct: 38 VQEYGADQILSMCHNKDNKPFYAFIGTFLSPQTRDQITFASVKKLHETLGELTIDVINNT 97
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + I V FYT KA +K+ I +++ +P + +LL+LPG+GPK+A+++++
Sbjct: 98 SLEVLINCIKGVGFYTTKAKRLKRCCVIMKEQFNNQVPQTKQDLLSLPGVGPKIASLILS 157
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+G+ ++ + +DTH+ I +RLGW S+PE+ R L+ WLPKEEW N +
Sbjct: 158 IGFDRLESLAIDTHIFVISHRLGWA-------DGSTPEKVRLQLESWLPKEEWSLFNKSI 210
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
V FGQ C + P+C C + + C K +
Sbjct: 211 VAFGQCCCRKIHPKCKQCPIQDKCHYYHKST 241
>gi|167044454|gb|ABZ09130.1| putative HhH-GPD superfamily base excision DNA repair protein
[uncultured marine crenarchaeote HF4000_APKG6D9]
Length = 216
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F++L+ +LS+ TKD+ A++ L ++ + A ++ +I + F+ K+
Sbjct: 34 FSILIGTILSARTKDEATTKAVKALFSK-YKNSKQLANAKVKDVEKIIKSIGFFHVKSKR 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AKI TKY G +P +LD L+ LPG+G K AN V+ F I VD HVHRI NR
Sbjct: 93 IIEVAKIINTKYKGKVPDNLDTLVELPGVGRKTANCVLVYA-FEKPAIPVDIHVHRISNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V T +PE+T + L + +PK+ W+ IN V +GQ IC P+ P C +C +
Sbjct: 152 LGLVD-------TKNPEETEQELMKKIPKKYWIDINDTFVMYGQNICKPISPMCDVCKIK 204
Query: 206 EYC 208
+ C
Sbjct: 205 KNC 207
>gi|428171428|gb|EKX40345.1| hypothetical protein GUITHDRAFT_43372, partial [Guillardia theta
CCMP2712]
Length = 205
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 105/190 (55%), Gaps = 8/190 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPVAFYTRK 82
F L++ALLS D VA A + L + GL +D+ T +L I +Y K
Sbjct: 20 FLCLVAALLSVQCLDSVALKAFESL-REGLGGQLTVDRVSSMTAAELEPYIKSCNYYKTK 78
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFN-VQGICVDTHVHR 141
A ++ A ++ G +P+S L+ L G+GPK+AN+V+++G + G+ VDTHVHR
Sbjct: 79 AKSIHACAVSLKKRHGGRVPASFSSLVQLEGVGPKIANLVLSVGLGDESAGLVVDTHVHR 138
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
+ RLGW + K E +R L+ W+P+ E V +L+ FGQT+CTPLRP C +
Sbjct: 139 VAGRLGWAVKSADGGKA---EDSRRMLEEWVPESERVDFTLVLISFGQTVCTPLRPSCDV 195
Query: 202 CTVSEYCPSA 211
C V CPSA
Sbjct: 196 CPVRACCPSA 205
>gi|48477970|ref|YP_023676.1| endonuclease III [Picrophilus torridus DSM 9790]
gi|48430618|gb|AAT43483.1| endonuclease III [Picrophilus torridus DSM 9790]
Length = 215
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 113/200 (56%), Gaps = 10/200 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL++ +LS TKD V D + R L N H A + A +K +I V F K+
Sbjct: 26 FWVLITTILSQRTKDNVTDAS-ARALYNRYHDAAGLAMAKPEDVKKIIKNVGFSNVKSKR 84
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ AK L Y+G++P + +EL+ + G+G K AN+V+T FN I VDTHVHRI NR
Sbjct: 85 VIDAAKYILKNYNGNVPDTYEELMKIKGVGTKTANIVLTQS-FNKPAIPVDTHVHRIVNR 143
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V T +PE+T L++ +P E + NP+LV FG+ IC P+ P+C MC V
Sbjct: 144 IGFVN-------TRTPEETETELKKIIPLEYQIEFNPVLVEFGKNICKPVSPKCDMCLVR 196
Query: 206 EYCPSAFKESSTSSSKSKKS 225
+ C + S ++ K+ K+
Sbjct: 197 D-CCDYYSRKSINNVKANKA 215
>gi|448739187|ref|ZP_21721202.1| endonuclease III [Halococcus thailandensis JCM 13552]
gi|445799782|gb|EMA50151.1| endonuclease III [Halococcus thailandensis JCM 13552]
Length = 228
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
RF +L++ +LS+ D + L ++ + EA A + + + + + +Y KA
Sbjct: 35 RFELLVAVILSAQCTDARVNETTDELFES-YPSPEAFANAPQEELAEALNSITYYNNKAS 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+++ A+I + +YDGD+P ++ EL LPG+G K AN+V+ G+ V+GI VDTHV R+
Sbjct: 94 YIRESAQIVVEEYDGDVPDTMGELTELPGVGRKTANVVLQHGYDVVEGIVVDTHVQRLTR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE+ E L ++P E W L + G+ CT P CG C +
Sbjct: 154 RLGLTEE-------QRPERIEEDLMEFVPAERWQAFTHLFIDHGRATCTARNPECGDCVL 206
Query: 205 SEYCPSAFKESSTSSSKSKK 224
+ CPS+ +SST + ++
Sbjct: 207 EDICPSSKVDSSTDLASGEE 226
>gi|188997398|ref|YP_001931649.1| endonuclease III [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932465|gb|ACD67095.1| endonuclease III [Sulfurihydrogenibium sp. YO3AOP1]
Length = 209
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 108/187 (57%), Gaps = 9/187 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L+ +LS+ T DK + + +L T +A+ AD ++++I P+ FY RK
Sbjct: 26 ENEFQLLIVIILSAQTTDKKVNQ-VSPILFKKYPTPQALANADLKDLEEIIKPLGFYKRK 84
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A +K+ AK L K+ G IP +L+EL +LPG+G K A+ ++ + + + I VDTHV R+
Sbjct: 85 AKLIKECAKAILEKFSGQIPKTLEELTSLPGVGRKTASALL-VNAYKIPAIVVDTHVKRV 143
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RL Q +SPE+ + L ++ KE WV I+ LV FG+ ICT +P+C C
Sbjct: 144 AKRLKITNQ-------TSPEKVEKDLTKFFSKENWVYISNALVLFGRYICTANKPKCKEC 196
Query: 203 TVSEYCP 209
VS+ CP
Sbjct: 197 YVSDICP 203
>gi|253745075|gb|EET01183.1| Endonuclease III [Giardia intestinalis ATCC 50581]
Length = 321
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
+IYPV F RKA MK +A++C+ Y GDIP L +L LPG GPKM ++++ + + V+
Sbjct: 143 IIYPVGFSRRKAEYMKNVAQVCIDSYGGDIPGDLAGILKLPGFGPKMGHLLVQIVYGQVE 202
Query: 132 GICVDTHVHRICNRLGWVTQPGTK--QKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
GI VDTHV RI RL WV + + K +P+ + L LPK++W IN LLVGFGQ
Sbjct: 203 GIAVDTHVCRITQRLRWVEKGMCEPDGKVLNPDDVAKQLVETLPKDKWGDINHLLVGFGQ 262
Query: 190 TICTPLRPRCGMCTVS 205
T+C P C C ++
Sbjct: 263 TVCKASFPECSRCLIA 278
>gi|308161443|gb|EFO63889.1| Endonuclease III [Giardia lamblia P15]
Length = 323
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 7/168 (4%)
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
+I+PV F RKA MK +A+ICL Y GDIP L +L LPG GPKM ++++ + + V+
Sbjct: 143 IIHPVGFCRRKAEYMKNVAQICLDNYGGDIPKDLAGILKLPGFGPKMGHLLVQIVYGQVE 202
Query: 132 GICVDTHVHRICNRLGWVTQPGTK--QKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
GI VDTHV RI RL WV + + K +P+ + L LPK++W IN LLVGFGQ
Sbjct: 203 GIAVDTHVCRIAQRLRWVEKGMCEPNGKMLNPDDVAKQLVETLPKDKWRDINHLLVGFGQ 262
Query: 190 TICTPLRPRCGMCTVSE-----YCPSAFKESSTSSSKSKKSESSSLRK 232
T+C P C C ++ + P E+ ++++ + + R+
Sbjct: 263 TVCKASFPECNRCLIAGTGRCYHKPETKPEAGAGKPRNRERRAKASRR 310
>gi|410049791|ref|XP_003954501.1| PREDICTED: LOW QUALITY PROTEIN: endonuclease III-like protein 1
[Pan troglodytes]
Length = 266
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 94/157 (59%), Gaps = 5/157 (3%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 111 PVDHLGTEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRARGL-TVDSILQT 169
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 170 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVAELVALPGVGPKMAHLAMA 229
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSP 161
+ W V GI H GW+ G + P
Sbjct: 230 VAWGTVSGI---GEWHTPPGGRGWLQPTGCSWDSPHP 263
>gi|327408294|emb|CCA30142.1| hypothetical protein NCLIV_070230 [Neospora caninum Liverpool]
Length = 480
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 10/151 (6%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K R+F+VL++ +LSS TKD+ +QRL + + E +++ A + DL+Y V F+
Sbjct: 332 KRRKFSVLVAVMLSSQTKDEQTAACMQRLRDADVLSPEKMNRLSVAELSDLLYGVGFHQN 391
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
KA +K+ L KY GDIP + +EL+ L G+GPKMAN+ GW V+GI VD HVHR
Sbjct: 392 KARFLKEACATLLEKYGGDIPPTYEELVQLKGVGPKMANIA---GWGRVEGIAVDVHVHR 448
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWL 172
I NRL WV KT +P +T+ ALQ++L
Sbjct: 449 ITNRLNWV-------KTKNPIETQHALQKFL 472
>gi|159111056|ref|XP_001705761.1| Endonuclease III [Giardia lamblia ATCC 50803]
gi|157433850|gb|EDO78087.1| Endonuclease III [Giardia lamblia ATCC 50803]
Length = 323
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 84/136 (61%), Gaps = 2/136 (1%)
Query: 72 LIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ 131
+I+PV F RKA MK +A+ICL Y GDIP L +L LPG GPKM ++++ + + V+
Sbjct: 143 IIHPVGFCRRKAEYMKNVAQICLDNYGGDIPKDLAGILKLPGFGPKMGHLLVQIVYGQVE 202
Query: 132 GICVDTHVHRICNRLGWVTQPGTK--QKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
GI VDTHV RI RL WV + + K +P+ + L LPK++W IN LLVGFGQ
Sbjct: 203 GIAVDTHVCRIAQRLRWVEKGMCEPNGKMLNPDDVAKQLVETLPKDKWRDINHLLVGFGQ 262
Query: 190 TICTPLRPRCGMCTVS 205
T+C P C C ++
Sbjct: 263 TVCKASFPECNRCLIA 278
>gi|294944113|ref|XP_002784093.1| endonuclease III, putative [Perkinsus marinus ATCC 50983]
gi|239897127|gb|EER15889.1| endonuclease III, putative [Perkinsus marinus ATCC 50983]
Length = 292
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 103/182 (56%), Gaps = 11/182 (6%)
Query: 15 TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ----NGLHTAEAIDKADEATIK 70
TD ++R F +L++ +LSS TKD+ A+ L NG T + DE +
Sbjct: 7 TDPEATEEDRCFQLLIAVMLSSQTKDQENAKAMHNLHSHFKGNGGLTRANLAGMDEKDLD 66
Query: 71 DLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV 130
I V F+ K N+ K+A I +++G +P S+++LL+LPG+GPKMA +VM +G +
Sbjct: 67 AQIRGVGFHNTKTRNLIKVANILKEQFNGKVPDSMEDLLSLPGVGPKMAVLVMEIGHGHR 126
Query: 131 Q-GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQ 189
GICVDTHVHRI LGW + +PE TR+ L+ LP E W +N LLVG GQ
Sbjct: 127 DAGICVDTHVHRIAAMLGWT------KNAKTPEATRQQLEARLPLEVWPDMNLLLVGLGQ 180
Query: 190 TI 191
+
Sbjct: 181 MV 182
>gi|374852375|dbj|BAL55309.1| endonuclease III [uncultured Chlorobi bacterium]
Length = 204
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 103/188 (54%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + + L Q T E K ++ IYP +Y KA
Sbjct: 25 FELLVATILSAQCTDERVNQVTEVLFQK-YRTPEDYLKVPLEELERDIYPTGYYKAKARA 83
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ + L ++ G +P +L+EL +LPG+G K AN+V+ +F QGI VDTHV RI R
Sbjct: 84 LRACCQALLERFGGQVPHTLEELTSLPGVGRKTANVVLG-EFFEPQGIVVDTHVARIVQR 142
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ +TS+ E L +P+EEWVR L++ G+ IC RPRC C ++
Sbjct: 143 LGFA-------ETSNREHIERRLMELVPREEWVRFTHLMIAHGRAICRARRPRCSECVLA 195
Query: 206 EYCPSAFK 213
+ CPSA +
Sbjct: 196 DLCPSAHR 203
>gi|319956678|ref|YP_004167941.1| DNA-(apurinic or apyrimidinic site) lyase [Nitratifractor
salsuginis DSM 16511]
gi|319419082|gb|ADV46192.1| DNA-(apurinic or apyrimidinic site) lyase [Nitratifractor
salsuginis DSM 16511]
Length = 218
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S LLS T+D+V A +RL T EA+ E I IYPV F+ +KA
Sbjct: 36 YTILISTLLSFQTRDEVTLEAGKRLFALA-DTPEAMLGLSEEEIARTIYPVGFWRKKAAG 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ + L ++ G++PS+L EL A+ GIGPK A +V+ + VDTHVHRI N
Sbjct: 95 ILEVTRTLLERHGGEVPSTLSELTAIKGIGPKTAKIVLE-NAYGQSVAAVDTHVHRILNL 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V +T+SPE T +AL+ L E +N LLV FGQ IC P P C C +
Sbjct: 154 LGVV-------ETASPEATDKALEGLLEPGELKGLNKLLVSFGQAICRPRNPLCSRCPIR 206
Query: 206 EYCPSA 211
CP A
Sbjct: 207 SCCPKA 212
>gi|41223388|tpe|CAD59973.1| TPA: putative endonuclease III homologue [Trypanosoma brucei]
Length = 151
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 81/133 (60%), Gaps = 5/133 (3%)
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
L + G +P S + L++LPG+GPKMA++ + V GI VDTHVHRI R WV P
Sbjct: 8 LQLHKGTVPRSYEGLVSLPGVGPKMAHLFLQEADSVVIGIGVDTHVHRIAQRFHWV--PS 65
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
T SPE TR+AL+ WLP + W IN +LVG GQTICTP PRC C S CPSAF+
Sbjct: 66 T---VKSPEDTRKALEAWLPAKYWGEINGMLVGLGQTICTPRIPRCSECPASGLCPSAFR 122
Query: 214 ESSTSSSKSKKSE 226
E+ + + E
Sbjct: 123 EAKGGVKRQRLPE 135
>gi|116180194|ref|XP_001219946.1| hypothetical protein CHGG_00725 [Chaetomium globosum CBS 148.51]
gi|88185022|gb|EAQ92490.1| hypothetical protein CHGG_00725 [Chaetomium globosum CBS 148.51]
Length = 977
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 122/250 (48%), Gaps = 52/250 (20%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQN-----------GLHTAEAIDKADEATIK 70
++RRF L++ +LSS TKD V A+ RL QN GL+ + +
Sbjct: 600 RDRRFHTLVALMLSSQTKDTVNAAAMARL-QNELPPHTPGAPPGLNLENMLARRPRPCSN 658
Query: 71 DLIYPVAFYTR---KAC---------------------------NMKKIAKICLTKYDGD 100
+LI F+ K C +K A + ++ D
Sbjct: 659 ELIREGRFFDNNKTKVCIYGPPRPPSPPPQAATNPHPPSSLLNRYLKTTAALLRDNFNSD 718
Query: 101 IPSSLDELLALPGIGPKMANMVMTL--GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKT 158
IP ++ L +LPG+GPKMA++ M+ GW V+GI VD HVHRI N GW P ++
Sbjct: 719 IPPTIAGLTSLPGVGPKMAHLCMSAPNGWNRVEGIGVDVHVHRITNLWGW-QAPASR--- 774
Query: 159 SSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS--EYCPSAFKESS 216
+PE+TR AL+ WLP++ W IN LLVG GQ++C P+ RCG C V C SA + +
Sbjct: 775 -TPEETRAALESWLPRDRWREINWLLVGLGQSVCLPVGRRCGDCEVGLRGLCKSADR-AK 832
Query: 217 TSSSKSKKSE 226
+ K ++ E
Sbjct: 833 VAEGKRRRGE 842
>gi|67479287|ref|XP_655025.1| endonuclease III [Entamoeba histolytica HM-1:IMSS]
gi|56472130|gb|EAL49639.1| endonuclease III, putative [Entamoeba histolytica HM-1:IMSS]
gi|449707262|gb|EMD46954.1| endonuclease III, putative [Entamoeba histolytica KU27]
Length = 241
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 9/204 (4%)
Query: 7 VYSLGVDETDSSLPPKERR-FAVLLSALLSSLTKDKVADGALQRLLQN-GLHTAEAIDKA 64
V G ++ S K+ + F + LS T+D++ ++++L + G + + I+
Sbjct: 38 VQEYGAEQILSMCHNKDNKPFYAFIGTFLSPQTRDQITFASVKKLHETLGELSVDVINNT 97
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+ + I V FYT KA +K I +Y+ +P + +LL LPG+GPK+A+++++
Sbjct: 98 SLEVLINCIKGVGFYTTKAKRLKHCCVIMKEQYNNQVPQTKQQLLTLPGVGPKIASLILS 157
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
+G+ ++ + +DTHV I RLGW S+PE+ R L+ WLPKEEW N L
Sbjct: 158 IGFDRLESLAIDTHVFVISQRLGWA-------DGSTPEKVRLQLESWLPKEEWPLFNKSL 210
Query: 185 VGFGQTICTPLRPRCGMCTVSEYC 208
V FGQ C P+C C + + C
Sbjct: 211 VAFGQCCCRKTHPKCKQCPIQDKC 234
>gi|397589414|gb|EJK54652.1| hypothetical protein THAOC_25701, partial [Thalassiosira oceanica]
Length = 470
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 12/168 (7%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLH-TAEAIDKADEATIKDLIYPVAFYTRKA 83
RF VL++ +LSS TKD V +++L Q G T E I D T+ L++ V F+ K
Sbjct: 263 RFQVLVALMLSSQTKDAVVGMTMRKLQQAGAGLTVENIHSMDPQTLNKLLHSVGFHNNKT 322
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+K A+ + KY GDIP + DE++ L G+GPKMA +V + + G H+H+
Sbjct: 323 VFIKAAAETLIEKYQGDIPPTADEMMELKGVGPKMAYIVEQIAFGESPGF----HMHKNF 378
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
N+L WV + +PEQTR L+ WLP+E+W +N L VGFGQ +
Sbjct: 379 NKLNWVN-------SKTPEQTRVQLEGWLPREKWSEVNVLWVGFGQKL 419
>gi|397569794|gb|EJK46969.1| hypothetical protein THAOC_34338 [Thalassiosira oceanica]
Length = 385
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 96/168 (57%), Gaps = 17/168 (10%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLH-TAEAIDKADEATIKDLIYPVAFYTRKA 83
RF VL++ +LSS TKD V +++L Q G T E I D T+ +L++ V F+ K
Sbjct: 183 RFQVLVALMLSSQTKDAVVGMTMRKLQQAGAGLTVENIHSMDPQTLNELLHSVGFHNNKT 242
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+K A+ + KY GDIP + DE++ L G+GPKMA +V + + H+H+
Sbjct: 243 VFIKAAAETLIEKYQGDIPPTADEMMELKGVGPKMAYIVEQIAFV---------HMHKNF 293
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
N+L WV + +PEQTR L+ WLP+E+W +N L VGFGQ +
Sbjct: 294 NKLNWVN-------SKTPEQTRVQLEGWLPREKWSDVNVLWVGFGQEV 334
>gi|257051671|ref|YP_003129504.1| endonuclease III [Halorhabdus utahensis DSM 12940]
gi|256690434|gb|ACV10771.1| endonuclease III [Halorhabdus utahensis DSM 12940]
Length = 228
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + L + T E ADE + + IY + F+ KA
Sbjct: 34 NRLELLVAVVLSAQCTDERVNETTPELFET-YQTPEDYAAADEEQLAEDIYGITFHNNKA 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+K I +I + ++DG++P ++D L ALPG+G K AN+V+ G V+GI VDTHV R+
Sbjct: 93 GYLKGIGEILVEEHDGEVPDTMDALTALPGVGRKTANVVLQHGHDVVEGIVVDTHVQRLT 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P+ + L +P++EW L++ G+ +CT P CG C
Sbjct: 153 RRLGLTEE-------ERPDAIEDDLMEIIPEDEWQAFTHLMISHGRAVCTARNPDCGDCA 205
Query: 204 VSEYCPSA 211
+ + CPS+
Sbjct: 206 LEDVCPSS 213
>gi|355574942|ref|ZP_09044578.1| endonuclease III [Olsenella sp. oral taxon 809 str. F0356]
gi|354818418|gb|EHF02910.1| endonuclease III [Olsenella sp. oral taxon 809 str. F0356]
Length = 230
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 111/202 (54%), Gaps = 8/202 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +++ LLS+ T D + L + T +A+ A+ ++D+I+ + FY KA +
Sbjct: 37 FTLVICVLLSAQTTDVAVNKVTPELFRR-WPTPQAMAAAEVLEVEDVIHSLGFYHTKARH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ A+ + + G++P +++EL+ LPG+G K AN+V+ + V GI VDTHV+RI +R
Sbjct: 96 CVECAQAIIASFGGEVPGTMEELVTLPGVGRKTANIVLNKAFGVVDGIAVDTHVYRIASR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L V P +P Q L LP+E W +N + FG+ CT RP+C C +
Sbjct: 156 LRLVDAP-------TPAQAEPQLLDVLPRELWGPVNEQWIHFGRETCTSQRPKCDACALV 208
Query: 206 EYCPSAFKESSTSSSKSKKSES 227
+ CPSAFK + +++ ++ S
Sbjct: 209 DLCPSAFKANGKPNARPRRRSS 230
>gi|237756075|ref|ZP_04584653.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691768|gb|EEP60798.1| endonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
Length = 209
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 109/187 (58%), Gaps = 9/187 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ T DK + + +L T +A+ AD ++++I P+ +Y RK
Sbjct: 26 ENEFQLLIAIILSAQTTDKKVNQ-VSPILFKKYPTPQALANADLKDLEEIIKPLGYYRRK 84
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A +K+ AK + K++G IP +L+EL++LPG+G K A+ + + + + I VDTHV R+
Sbjct: 85 AKLIKECAKAIVEKFNGQIPKTLEELISLPGVGRKTASAFL-VNAYKIPAIVVDTHVKRV 143
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RL Q ++PE+ + L ++ KE W I+ LV FG+ ICT +P+C C
Sbjct: 144 AKRLKITNQ-------TNPEKVEKDLAKFFSKENWAYISNALVLFGRYICTANKPKCKEC 196
Query: 203 TVSEYCP 209
VS+ CP
Sbjct: 197 YVSDICP 203
>gi|440292608|gb|ELP85795.1| endonuclease III, putative [Entamoeba invadens IP1]
Length = 236
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 107/208 (51%), Gaps = 11/208 (5%)
Query: 6 PVYSLGVDETDS-SLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQN-GLHTAEAIDK 63
PV S+G + + + F L LS T D+ A++ L G T E I+
Sbjct: 28 PVNSMGAEAIAGMTQNASNKPFYTFLGTFLSPQTHDEKTFEAVKTLHTTFGELTPEIINH 87
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
T++ I V F K+ +K+ KI + KYDG +PS+ DEL ALPG+G K+A++++
Sbjct: 88 TSLETLQKCIKMVGFAKTKSKRLKECCKIFIEKYDGKVPSTFDELCALPGVGTKIASLIL 147
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
+ + I VDTHV I NRL W ++PE TR L+ WLPK++W N +
Sbjct: 148 AIAFDCHVAIPVDTHVFTISNRLEWA-------DATTPESTRIQLEEWLPKDKWSTFNKV 200
Query: 184 LVGFGQTICTPLRPRCGMCTVSEY--CP 209
LV FGQ CT P+C C + + CP
Sbjct: 201 LVSFGQCCCTKKSPKCSECPLQQARRCP 228
>gi|296219347|ref|XP_002755822.1| PREDICTED: endonuclease III-like protein 1 [Callithrix jacchus]
Length = 307
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + DSS PPK RR+ VLLS +LSS TKD+V GA+QRL GL T ++I +
Sbjct: 111 PVDHLGAEHCYDSSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMQRLRAQGL-TVDSILQT 169
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+AT+ LIYPV F+ K +K+ + I Y GDIP+S+ EL+ALPG+GPKMA++ M
Sbjct: 170 DDATLGKLIYPVGFWRSKVKYIKQTSAILQQCYGGDIPASVAELVALPGVGPKMAHLAMA 229
Query: 125 LGWFNVQGI 133
+ W V GI
Sbjct: 230 VAWGIVSGI 238
>gi|383458979|ref|YP_005372968.1| base excision DNA repair protein [Corallococcus coralloides DSM
2259]
gi|380733644|gb|AFE09646.1| base excision DNA repair protein [Corallococcus coralloides DSM
2259]
Length = 254
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T D+V+ A RLL HT EA+ + A I LI PV F+ KA
Sbjct: 72 FEQLIACILSIRTLDEVSLPASLRLLGRA-HTPEALARLTPAEIDALIRPVTFHEGKAHQ 130
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA +++G +P+ D L + G+GPK A++ + + + + I VD HVHR+ NR
Sbjct: 131 VHAIAVRTRDEFNGQLPADPDVLQSFKGVGPKCAHLALGIACGH-EVISVDIHVHRVTNR 189
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V K S+PE+T AL+ LP+ WV +N LLV FG+ +CT RP+C C V
Sbjct: 190 WGYV-------KASTPERTLAALEAVLPRPYWVELNRLLVPFGKHVCTGTRPKCSTCPVL 242
Query: 206 EYC 208
YC
Sbjct: 243 PYC 245
>gi|393796716|ref|ZP_10380080.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 175
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 100/175 (57%), Gaps = 9/175 (5%)
Query: 34 LSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKIC 93
+S+ TKD+ A+ ++L + A+ + A ++ +I + FY K+ + ++AKI
Sbjct: 1 MSARTKDETTTKAV-KVLFSKYKNAKELASAKTKDVEKIIKSIGFYHVKSKRIIEVAKII 59
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+KY G +P +L++L+ LPG+G K AN V+ F+ I VD HVHRI NRLG V
Sbjct: 60 NSKYKGKVPDNLEKLVELPGVGRKTANCVLVYA-FDKPAIPVDIHVHRISNRLGLVN--- 115
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
T +PE+T + L R +PK+ W+ IN V +GQ IC P+ P C +C + C
Sbjct: 116 ----TKTPEETEQELMRIIPKKFWIDINDTFVMYGQNICKPISPMCNVCKIKNNC 166
>gi|91773087|ref|YP_565779.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Methanococcoides burtonii DSM 6242]
gi|91712102|gb|ABE52029.1| Endonuclease III [Methanococcoides burtonii DSM 6242]
Length = 204
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S +LS T+D+V Q+L + T + AD I++LI V FY K+
Sbjct: 27 YYILISTVLSQRTRDEVTIPTTQKLF-SVFDTPPKMANADADEIQELIRNVGFYRVKSHR 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I+++ L +YDG +P ++EL+ LPG+G K AN V+T F+ I VDTHVHRI NR
Sbjct: 86 LIEISRMLLDEYDGIVPDDINELVKLPGVGRKTANCVLTYA-FDKDAIAVDTHVHRISNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V KT++PE+T L + + KE W IN L+V FG++ C P+ P+C C ++
Sbjct: 145 MGLV-------KTTTPEETEIELGKVVEKEMWKDINGLMVLFGKSTCRPVSPKCDECIMN 197
Query: 206 EYCP 209
+ CP
Sbjct: 198 DICP 201
>gi|114566493|ref|YP_753647.1| endonuclease III [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337428|gb|ABI68276.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 207
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 109/189 (57%), Gaps = 9/189 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +++ +LS+ + D+ + L + T EA+ D + +++ I V Y KA +
Sbjct: 28 FQFMVAVVLSAQSTDEQVNRVTAELFAD-YGTPEALAAIDLSLLEEKIRGVGLYRNKARH 86
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+A+I + +Y G++PS DELL+LPG+G K AN++ ++ F G+ VDTHVHR+ NR
Sbjct: 87 LKKMAQIIVEQYQGEVPSDFDELLSLPGVGRKSANVIRSV-VFKKPGLGVDTHVHRVANR 145
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V + PEQT +AL+ +P++ W + LL+ G+ IC +P+C C +
Sbjct: 146 LGLVN-------SKLPEQTEKALKEQIPEKCWSEAHHLLIFHGRRICQARKPQCNNCVLE 198
Query: 206 EYCPSAFKE 214
C F++
Sbjct: 199 GLCEKRFEK 207
>gi|335437705|ref|ZP_08560474.1| endonuclease III [Halorhabdus tiamatea SARL4B]
gi|334894983|gb|EGM33167.1| endonuclease III [Halorhabdus tiamatea SARL4B]
Length = 228
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + L + T E ADE + + IY V F+ KA
Sbjct: 35 RLELLVAVVLSAQCTDERVNETTPELFEK-YQTPEDYATADEEVLAEDIYGVTFHNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+K I ++ + ++DGD+P ++DEL LPG+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YLKGIGELLVDEHDGDVPDTMDELTDLPGVGRKTANVVLQHGHDVVEGIVVDTHVQRLTR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE + L +P+ EW L++ G+ +CT P C C +
Sbjct: 154 RLGIT-------EAQRPEAIEKDLMEIIPEAEWQDFTHLMISHGRAVCTARNPDCADCEL 206
Query: 205 SEYCPSAFKESSTS 218
+ CPS+ +S
Sbjct: 207 DDVCPSSRLDSDVD 220
>gi|406994421|gb|EKE13413.1| hypothetical protein ACD_13C00021G0015 [uncultured bacterium]
Length = 199
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 97/171 (56%), Gaps = 9/171 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ L+S LLS+ TKD V A +RL + E +++ + I LIYPV FY KA +
Sbjct: 27 YKTLVSTLLSARTKDGVTLEASKRLFKIA-PNLEKLNQLEINEIGKLIYPVGFYKTKAKH 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K +A+I LT Y G +P + EL LPG+G K AN+V+ F V I VDTHVHRI N
Sbjct: 86 LKTLARIVLTSYGGKVPKTQKELNTLPGVGIKTANLVLNRA-FGVPAIAVDTHVHRISNL 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLR 196
LGWV T +PEQT + L + +PK+ W +N L V G+ + R
Sbjct: 145 LGWV-------HTKTPEQTEKELIKVVPKKYWPDMNRLFVSIGRQFTSKKR 188
>gi|393796715|ref|ZP_10380079.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 175
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 100/175 (57%), Gaps = 9/175 (5%)
Query: 34 LSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKIC 93
+S+ TKD+ A+ ++L + A+ + A ++ +I + FY K+ + ++AKI
Sbjct: 1 MSARTKDETTTKAV-KVLFSKYKNAKELANAKTKDVEKIIKSIGFYHVKSKRIIEVAKII 59
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+KY G +P +L++L+ LPG+G K AN V+ F+ I VD HVHRI NRLG V
Sbjct: 60 NSKYKGKVPDNLEKLVELPGVGRKTANCVLVYA-FDKPAIPVDIHVHRISNRLGLVD--- 115
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
T +PE+T + L R +PK+ W+ IN V +GQ IC P+ P C +C + C
Sbjct: 116 ----TKTPEETEQELMRIIPKKFWIDINDTFVMYGQNICKPISPMCSVCKIKNDC 166
>gi|448727672|ref|ZP_21710021.1| endonuclease III [Halococcus morrhuae DSM 1307]
gi|445789658|gb|EMA40337.1| endonuclease III [Halococcus morrhuae DSM 1307]
Length = 228
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 8/200 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
RF +L++ +LS+ D + L ++ + EA A + + + + + +Y KA
Sbjct: 35 RFELLVAVVLSAQCTDARVNETTDELFES-YPSPEAFANAPQEELAEALNSITYYNNKAS 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+++ A++ + ++DG++P ++ EL LPG+G K AN+V+ G+ V+GI VDTHV R+
Sbjct: 94 YIRESAQLVVEEHDGEVPDTMGELTELPGVGRKTANVVLQHGYDVVEGIVVDTHVQRLTR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE+ E L ++P E W L + G+ CT P CG C +
Sbjct: 154 RLGLTEE-------QRPERIEEDLMEFVPTEHWQAFTHLFIDHGRATCTARNPECGDCVL 206
Query: 205 SEYCPSAFKESSTSSSKSKK 224
+ CPS+ +SST + ++
Sbjct: 207 EDICPSSKVDSSTDLASGEE 226
>gi|149174185|ref|ZP_01852813.1| endonuclease III [Planctomyces maris DSM 8797]
gi|148847165|gb|EDL61500.1| endonuclease III [Planctomyces maris DSM 8797]
Length = 240
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + L + TAE + + +A ++ ++YP+ F+ KA N
Sbjct: 56 FQLLVATILSAQCTDERVNATTPTLFKK-YPTAEKLSTSKQADVEKIVYPLGFFRAKATN 114
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++K+A +Y G+IP +L EL+ALPG+G K AN+V+ + G+ VDTHV RICN
Sbjct: 115 IRKMALAVTEQYAGEIPRTLKELVALPGVGRKTANVVLGTAFGIPSGVVVDTHVKRICNI 174
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G T + +PE L LPK+EW+ + ++ G+ C +PRC C++
Sbjct: 175 FGLTT-------SKNPEIIERDLMEVLPKKEWIAFSHRVILHGRATCVARKPRCTECSLL 227
Query: 206 EYCP 209
+ CP
Sbjct: 228 KICP 231
>gi|407465823|ref|YP_006776705.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus sp. AR2]
gi|407049011|gb|AFS83763.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus sp. AR2]
Length = 216
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 107/197 (54%), Gaps = 17/197 (8%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKD---LIYPVAFYTRK 82
F++L+ +LS+ TKD+ A++ L + E + A IKD +I + F+ K
Sbjct: 34 FSILIGTILSARTKDEATTKAVKELFSKYKNPKELAN----AKIKDVEKIIKSIGFFHVK 89
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
+ + ++AKI KY G +P +L+ L+ LPG+G K AN V+ F I VD HVHRI
Sbjct: 90 SKRIIEVAKIIDKKYKGKVPDNLETLVELPGVGRKTANCVLVYA-FEKPAIPVDIHVHRI 148
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRLG V T +PE+T + L + + K+ W+ IN V +GQ IC P+ P C +C
Sbjct: 149 SNRLGLVD-------TKNPEETEQELMKKIQKKYWIDINDTFVMYGQNICKPISPMCNVC 201
Query: 203 TVSEYCPSAFKESSTSS 219
+ + C F +S +S
Sbjct: 202 KIKKSC--KFYKSKNAS 216
>gi|139438722|ref|ZP_01772206.1| Hypothetical protein COLAER_01208 [Collinsella aerofaciens ATCC
25986]
gi|133775802|gb|EBA39622.1| endonuclease III [Collinsella aerofaciens ATCC 25986]
Length = 221
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 107/188 (56%), Gaps = 5/188 (2%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ LLS+ T D + +L T EA+ A A + D I + FY K
Sbjct: 34 ENPFRLLIAVLLSAQTTDAQVNKVTPKLFAQ-WPTPEAMAGASVADVADTIKSLGFYKSK 92
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A + + A++ + Y G++P+ + EL+ LPG+G K AN+V+ +G+ V+GI VDTHV+RI
Sbjct: 93 AKHAVEAAQMIVADYGGEVPADMKELVKLPGVGRKTANIVLNVGYGIVEGIAVDTHVNRI 152
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
+RL + P T K P +T + L + LP E W +N + FG+ IC +P+C C
Sbjct: 153 AHRL--MLSPKTHAK--EPLKTEQDLLKILPHEYWESVNHQWITFGREICDARKPKCDEC 208
Query: 203 TVSEYCPS 210
+++ CPS
Sbjct: 209 PLADLCPS 216
>gi|291280018|ref|YP_003496853.1| endonuclease III [Deferribacter desulfuricans SSM1]
gi|290754720|dbj|BAI81097.1| endonuclease III [Deferribacter desulfuricans SSM1]
Length = 212
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 106/193 (54%), Gaps = 9/193 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ D+ + L + E AD I + I P F+ K
Sbjct: 29 ENPFQLLIATILSAQCTDERVNKVTATLFKK-YKNFEDFKNADLEEIMEDIRPTGFFRNK 87
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+KK++++ L KY+G IP ++EL+ LPGIG K AN+++ FN+ GI VDTHV RI
Sbjct: 88 AKNIKKLSEVILEKYEGVIPVDINELVKLPGIGRKTANVLLG-NCFNIPGIVVDTHVKRI 146
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RLG +P++ + L +PKE+W + + ++ FG+ ICT +P+C +C
Sbjct: 147 SQRLGLTD-------NDNPDKIEQDLMEVIPKEKWTKWSHQVIDFGRKICTAKKPKCDIC 199
Query: 203 TVSEYCPSAFKES 215
+ + C A E+
Sbjct: 200 EMRDVCKFANSEA 212
>gi|355708146|gb|AES03177.1| nth endonuclease III-like 1 [Mustela putorius furo]
Length = 210
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/129 (49%), Positives = 87/129 (67%), Gaps = 2/129 (1%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV LG + D S PPK RR+ VLLS +LSS TKD+V GA++RL GL T ++I +
Sbjct: 83 PVDQLGAEHCYDPSAPPKVRRYQVLLSLMLSSQTKDQVTAGAMERLRARGL-TVDSILQT 141
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D++T+ LIYPV F+ K +K+ + I +Y GDIPSS+ EL+ALPG+GPKMA++ M
Sbjct: 142 DDSTLGALIYPVGFWRSKVKFIKQTSAILQQRYGGDIPSSVAELVALPGVGPKMAHLAMA 201
Query: 125 LGWFNVQGI 133
+ W V GI
Sbjct: 202 VAWGAVSGI 210
>gi|315425726|dbj|BAJ47382.1| endonuclease III [Candidatus Caldiarchaeum subterraneum]
gi|343484521|dbj|BAJ50175.1| endonuclease III [Candidatus Caldiarchaeum subterraneum]
Length = 217
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ A+LS T+D+ D A L + I AD T+ LI PV FY +KA
Sbjct: 32 FKVLVGAVLSHRTRDEKTDEAYHNLF-TWFNDPRDIASADVRTVARLIKPVGFYRQKAKR 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K++AKI K G +P + ELL LPG+GPK A++V+++ FN I VDTHV + R
Sbjct: 91 IKQLAKIVYGKLGGRVPDNRAELLKLPGVGPKSADIVLSIA-FNRPEIAVDTHVETVAKR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L G + E+ ++AL ++ IN L V FG+ IC RPRC +C ++
Sbjct: 150 L------GIADGKAGYEEVKKALTTLSKPDDIRLINHLFVKFGREICRRPRPRCSLCPIT 203
Query: 206 EYC 208
EYC
Sbjct: 204 EYC 206
>gi|152989812|ref|YP_001355534.1| endonuclease III [Nitratiruptor sp. SB155-2]
gi|151421673|dbj|BAF69177.1| endonuclease III [Nitratiruptor sp. SB155-2]
Length = 221
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 104/181 (57%), Gaps = 9/181 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L+S LLS TKD+V A RL + + + K TI+ IYPV FY +KA +
Sbjct: 38 YTILISTLLSFRTKDEVTFDAAHRLFLLADNPYDML-KVPRETIEQTIYPVGFYRQKARS 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ ++K ++D +P +L+ L+++ GIG K A +V+ F + VDTHVHRICN
Sbjct: 97 IQAVSKELTERFDRAVPDTLEALVSIKGIGHKTAKIVLE-NAFGKPYVAVDTHVHRICNI 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G V T SP++T + L++ L +E+ +N +LV FGQTIC P RP C C +
Sbjct: 156 WGLVN-------TVSPQETDKRLEKMLKEEDKRGLNKILVSFGQTICKPQRPHCEECPLK 208
Query: 206 E 206
E
Sbjct: 209 E 209
>gi|407461561|ref|YP_006772878.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus koreensis AR1]
gi|407045183|gb|AFS79936.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus
Nitrosopumilus koreensis AR1]
Length = 215
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F++L+ +LS+ TKD+ + + ++L + + + A ++ +I P+ FY K+
Sbjct: 34 FSILIGTILSARTKDE-STTKVVKILFSKYKNPKQLANAKLKDVEKIIKPIGFYHVKSKR 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AKI +KY G +P L+ L+ LPG+G K AN V+ F I VD HVHRI NR
Sbjct: 93 IIEVAKIIDSKYKGKVPEDLETLVELPGVGRKTANCVLVYA-FEKPAIPVDIHVHRISNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V T +PE+T + L + + K+ W+ IN V +GQ IC P+ P C +C +
Sbjct: 152 IGLVD-------TKNPEETEQELMKKIDKKFWIDINDTFVMYGQNICKPISPMCDVCKIK 204
Query: 206 EYC 208
C
Sbjct: 205 RNC 207
>gi|161527564|ref|YP_001581390.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosopumilus maritimus
SCM1]
gi|160338865|gb|ABX11952.1| DNA-(apurinic or apyrimidinic site) lyase [Nitrosopumilus maritimus
SCM1]
Length = 218
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 11/194 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F++L+ +LS+ TKD+ + + ++L + + + A ++ +I + FY K+
Sbjct: 36 FSILIGTILSARTKDE-STTKVVKVLFSKYKNPKQLANAKLKDVEKIIKSIGFYHVKSKR 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AKI +KY G +P LD L+ LPG+G K AN V+ F I VD HVHRI NR
Sbjct: 95 IIEVAKIIDSKYKGKVPEDLDTLVQLPGVGRKTANCVLVYA-FEKPAIPVDIHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V +T +PE+T + L + + K+ W+ IN V +GQ IC P+ P C +C +
Sbjct: 154 LGLV-------ETKNPEETEQELMKKVDKKFWIDINDTFVMYGQNICKPISPMCDVCKIK 206
Query: 206 EYCPSAFKESSTSS 219
C F +S +S
Sbjct: 207 RSC--KFYKSKNAS 218
>gi|402829196|ref|ZP_10878072.1| endonuclease III [Slackia sp. CM382]
gi|402284177|gb|EJU32680.1| endonuclease III [Slackia sp. CM382]
Length = 276
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 10/183 (5%)
Query: 27 AVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNM 86
AV+LSA + +KV +L A A+ A A I+++I+P+ F+ KA +
Sbjct: 99 AVVLSAQCTDAAVNKVTP-----ILFAEFPDAYALANAPLARIEEIIHPLGFFRTKAKKI 153
Query: 87 KKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRL 146
A+ ++ + G +P ++DEL LPG+G K AN+VM + + QGI VDTHV RI +RL
Sbjct: 154 IGCAQTVVSDFGGVVPRTMDELTRLPGVGRKTANVVMAQAFRDAQGIAVDTHVFRIAHRL 213
Query: 147 GWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE 206
G+ T + +PE+ L R PK +W+ IN V FG+ C PRC C V++
Sbjct: 214 GFAT-----RNDDTPEKVESKLLRIYPKPDWLFINHQWVHFGREFCQARNPRCAECFVAD 268
Query: 207 YCP 209
CP
Sbjct: 269 VCP 271
>gi|406993461|gb|EKE12589.1| Endonuclease III [uncultured bacterium]
Length = 199
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ L+S L+S+ TKD A +RL + ++K I+ LIYPV FY KA +
Sbjct: 27 YKTLISTLMSARTKDDTTLLAARRLFAKA-GNIKMLNKMSVNDIEKLIYPVGFYKTKARH 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K +A+ + K++G+IP + EL LPG+G K AN+V+ F++ I VDTHVHRI N
Sbjct: 86 IKLLAETVIKKFNGEIPKTQKELTTLPGVGVKTANLVLNRA-FSIPAIAVDTHVHRISNL 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
LGWV T +PEQT + L R +PK+ W +N L V G+ +
Sbjct: 145 LGWV-------HTKTPEQTEKELVRRVPKKYWSEMNRLFVSVGRQFTS 185
>gi|259483988|tpe|CBF79828.1| TPA: DNA repair protein Ntg1, putative (AFU_orthologue;
AFUA_2G01120) [Aspergillus nidulans FGSC A4]
Length = 429
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 115/242 (47%), Gaps = 70/242 (28%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL---LQNG------LHT--AEAIDKAD---- 65
P++RRF L++ +LSS TKD V A+QRL L G L T AE+I K +
Sbjct: 175 PRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGEGGAPAIKLETEHAESIVKQEAENG 234
Query: 66 EATIKD--------------------------------LIYPVAFYTRKACNMKKIAKIC 93
E IK LI V F+ K +KK A+I
Sbjct: 235 EPAIKQEAKDGVPPANPSHDSTLNLENILAVSPERLNSLIGTVGFHNNKTKYIKKAAEII 294
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+Y+ DIPS+ EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW
Sbjct: 295 RDQYNSDIPSTPAELMKLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGW----- 349
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV--SEYCPSA 211
KT +PE+TR +L+ WLPK++W IN L RCG C + ++ C S
Sbjct: 350 --HKTKTPEETRMSLESWLPKDKWHEINKL--------------RCGDCGLAGTKLCKSE 393
Query: 212 FK 213
K
Sbjct: 394 IK 395
>gi|440494220|gb|ELQ76619.1| Endonuclease III [Trachipleistophora hominis]
Length = 201
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 108/202 (53%), Gaps = 20/202 (9%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL--------I 73
+ R+F VL+ +LS T+DK + L N L + + TI L I
Sbjct: 11 EHRKFRVLMMLILSQQTRDKTTYTTIHNL--NELLVRKYGEGISPYTISLLSLDELSSSI 68
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
+Y +KA N+K IA+ + + + + DEL+ LPGIG K+A + + + GI
Sbjct: 69 KNANYYIKKAKNIKMIAEYFVNR---KMATEYDELVKLPGIGNKIAFLYLQIACNKTVGI 125
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VDTHVHRI NRLG VT T +PE+TR L++ KEEW +IN ++VGFGQT+C
Sbjct: 126 GVDTHVHRIFNRLGVVT-------TKTPEETRIQLEQIYDKEEWGQINKVMVGFGQTVCL 178
Query: 194 PLRPRCGMCTVSEYCPSAFKES 215
P +P+C C V+ C K S
Sbjct: 179 PKKPKCNECVVNYCCKYGKKFS 200
>gi|14520880|ref|NP_126355.1| endonuclease III [Pyrococcus abyssi GE5]
gi|5458097|emb|CAB49586.1| nth endonuclease III [Pyrococcus abyssi GE5]
gi|380741424|tpe|CCE70058.1| TPA: endonuclease III [Pyrococcus abyssi GE5]
Length = 222
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 111/208 (53%), Gaps = 15/208 (7%)
Query: 9 SLGVDETDSSLPPKERR-----FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
+L + + S P+ER + L+ ++S +D+V D + L + + EAI
Sbjct: 13 ALKIVQILKSTYPRERHVSGDPYKTLIRCIISQRNRDEVTDRVSEELFKR-YPSIEAIAS 71
Query: 64 ADEATIKDLI--YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A +++ + V + K + + ++I L KY G +P +EL+ LPGIG K AN+
Sbjct: 72 ASVEEMQNFLRSLKVGLWRSKGKWIVETSRIILEKYKGRVPDKFEELIKLPGIGRKCANI 131
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ G F + I VDTHV+RI RLG +SPE+ E L+ +P+EEW+ +N
Sbjct: 132 VLAYG-FGIPAIPVDTHVYRISRRLGLAPW------DASPEEVEERLKELIPREEWIYVN 184
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+V G+++C P++PRC C + E CP
Sbjct: 185 HAMVDHGKSVCRPIKPRCDECPLKELCP 212
>gi|332157727|ref|YP_004423006.1| endonuclease III [Pyrococcus sp. NA2]
gi|331033190|gb|AEC51002.1| endonuclease III [Pyrococcus sp. NA2]
Length = 220
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 100/186 (53%), Gaps = 10/186 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLI--YPVAFYTRKA 83
+ L+ ++S +D+V D + L + T I A +++ + V + K
Sbjct: 35 YKTLIKCIISQRNRDEVTDRVSEELFKR-YPTIRDIANASIDEMREFLRSLKVGLWKNKG 93
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ ++++I L KYDG +P DELL LPGIG K AN+V+ G F + I VDTHV+RI
Sbjct: 94 KWIVEVSRILLEKYDGKVPDKFDELLKLPGIGRKCANIVLAYG-FGIPAIPVDTHVYRIS 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG +SPE+ E L+ +P+EEW+ +N +V G+ IC P+ PRC C
Sbjct: 153 RRLGLAPW------DASPEEVEERLKSLIPREEWIYVNHAMVDHGKRICRPVEPRCNECP 206
Query: 204 VSEYCP 209
+ + CP
Sbjct: 207 LRDLCP 212
>gi|406835463|ref|ZP_11095057.1| endonuclease III [Schlesneria paludicola DSM 18645]
Length = 225
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L + +LS+ D+ + L + T + + KAD+ +++LI FY K
Sbjct: 38 ESPFQLLAATILSAQCTDERVNMVTPALFKR-FPTPQDLAKADQTELEELIRSTGFYRNK 96
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ +A+ KY+G++P +L+EL+ALPG+G K AN+V+ + G+ VDTHV R+
Sbjct: 97 ATNLIGMAQALAEKYEGELPQTLEELVALPGVGRKTANVVLGSAFGITSGVVVDTHVKRL 156
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
N LG T +++PEQ L LP EEW+ + L+ G+ IC RP+C C
Sbjct: 157 TNLLGLTT-------SNNPEQIERDLMELLPPEEWINFSHRLIHHGRQICIARRPKCLEC 209
Query: 203 TVSEYCP 209
+ CP
Sbjct: 210 PLRPLCP 216
>gi|256827275|ref|YP_003151234.1| endonuclease III [Cryptobacterium curtum DSM 15641]
gi|256583418|gb|ACU94552.1| endonuclease III [Cryptobacterium curtum DSM 15641]
Length = 222
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 10/207 (4%)
Query: 8 YSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEA 67
Y G D P AV+LSA + +KV L T A+ +A+
Sbjct: 24 YGAGACSLDYECDPFRLLVAVVLSAQCTDAAVNKVTPS-----LFAAYPTPAALAQANVT 78
Query: 68 TIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW 127
+ +I+ + F+ KA ++ ++++ +T + G++P+ +D L LPG+G K AN+VM +
Sbjct: 79 DVATIIHSLGFFRAKATHLVHLSQVLMTDFGGEVPNDIDALQTLPGVGRKTANVVMCEAF 138
Query: 128 FNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGF 187
N QGI VDTHV RI ++L + +P +T AL + P+++W+ IN V F
Sbjct: 139 KNPQGIAVDTHVFRIAHKLKF-----AGPSADTPAKTEAALLKTYPQKDWLYINHQWVHF 193
Query: 188 GQTICTPLRPRCGMCTVSEYCPSAFKE 214
G+ C RPRC C +++ CPSA K+
Sbjct: 194 GREFCIARRPRCADCFIADLCPSASKD 220
>gi|345006727|ref|YP_004809580.1| endonuclease III [halophilic archaeon DL31]
gi|344322353|gb|AEN07207.1| endonuclease III [halophilic archaeon DL31]
Length = 227
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L+S +LS+ D+ + + L + TAE ADE + + IY + F+ K
Sbjct: 33 ESQLQLLISVVLSAQCTDERVNKVTEELYRT-YETAEDFANADEEQLAEEIYGITFHNSK 91
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A +K I + + K++G++P +++EL L G+G K AN+V+ V+GI VDTHV RI
Sbjct: 92 AGYLKSIGEDIVEKHNGEVPDTMEELTELSGVGRKTANVVLQHAHDVVEGIVVDTHVQRI 151
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RLG + PE + L ++P+ W + L + G+ +CT P CG C
Sbjct: 152 SRRLGLTEE-------ERPEAIEQDLLEFVPRRNWQQFTHLFIDHGRAVCTARNPDCGDC 204
Query: 203 TVSEYCPSAFKESSTS 218
+++ CPS +S
Sbjct: 205 ELADICPSEKGDSDVD 220
>gi|295107016|emb|CBL04559.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Gordonibacter pamelaeae 7-10-1-b]
Length = 220
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F + ++ LLS+ T DK + +L + T + AD ++D+I + F+ KA N
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPKLWER-YPTPADLASADVRDVEDIIRTIGFFHTKAAN 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K A++ +T Y G+IP +DEL LPG+G K AN+V+ + V+GI VDTHV RI +R
Sbjct: 97 VIKCAQMVVTDYGGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHR 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L + +P +T AL + P+E W IN V FG+ C P+CG C +
Sbjct: 157 LKF-----AGPSADTPAKTETALLKLYPREYWGPINHQWVLFGRETCIARSPKCGECFIC 211
Query: 206 EYCPSAFK 213
+ CPS K
Sbjct: 212 DLCPSCGK 219
>gi|269986417|gb|EEZ92704.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 229
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 116/215 (53%), Gaps = 13/215 (6%)
Query: 11 GVDETDSSLPPKERR---FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEA 67
V+ + +ER+ F VL+ +LS+ TKD A +RLL T E I K
Sbjct: 12 AVNMINKRYHNRERKIDPFEVLIHGILSTRTKDTTTFPAQKRLLAVA-DTPEKIIKLPIN 70
Query: 68 TIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW 127
I+ LIYPV F+ KA +K + + +++ +PS+ ++L+ +PG+G K+A++V+ G
Sbjct: 71 QIEKLIYPVGFFHTKAKLVKSACNVLIKEFNSKVPSTKEKLMTIPGVGNKVASLVLEWG- 129
Query: 128 FNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGF 187
FN+ I VDTHV+RI RLG V + GTK PE+T L+ L + + N V F
Sbjct: 130 FNLPYIAVDTHVNRISQRLGIVPE-GTK-----PEKTELILESILNPKLRITTNYSFVKF 183
Query: 188 GQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKS 222
G+ IC P+ P CG C V YC FK S +K
Sbjct: 184 GREICRPINPLCGKCPVYSYC--GFKLKSKYKNKG 216
>gi|424819591|ref|ZP_18244668.1| DNA-(Apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidophilus ARMAN-5_'5-way FS']
gi|290558918|gb|EFD92306.1| DNA-(apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidophilus ARMAN-5]
gi|326422568|gb|EGD71963.1| DNA-(Apurinic or apyrimidinic site) lyase [Candidatus Parvarchaeum
acidophilus ARMAN-5_'5-way FS']
Length = 217
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 8/187 (4%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
K F +L+ ++S+ TKD A +RLL T + I + I+ LIYPV FY
Sbjct: 23 KAEPFEILIHGIMSTRTKDTTTFPAQKRLLSIA-DTPKGISELPLKKIESLIYPVGFYKT 81
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
KA +KK + +D +PS EL+ +PG+GPK+A++V+ G FN+ I VDTHV+R
Sbjct: 82 KAKLLKKACNFLIDNFDSKVPSDKSELMKIPGVGPKVASLVLEWG-FNLPFIAVDTHVNR 140
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I RLG+V+ GTK P++T + L+ L +++N + FG+ IC P+ P C
Sbjct: 141 IVQRLGFVSI-GTK-----PDKTEKILEHALKDNIKIKVNSSFIYFGRAICKPISPLCSE 194
Query: 202 CTVSEYC 208
C V YC
Sbjct: 195 CPVYNYC 201
>gi|355571898|ref|ZP_09043106.1| endonuclease III [Methanolinea tarda NOBI-1]
gi|354824994|gb|EHF09229.1| endonuclease III [Methanolinea tarda NOBI-1]
Length = 225
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 8/202 (3%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L+ +LS+ T D+ + RL + + AD ++D+I+P+ FY K
Sbjct: 30 ENPFQILILTILSARTTDRSVNAIRDRLFSR-YPEPKDLANADPRDVEDIIHPLGFYREK 88
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
+ N+ K ++ + ++ G +P +D+LL LPG+G K AN+V+ + G+ VDTHV R+
Sbjct: 89 SQNIIKTSRALIERFGGRVPDRMDDLLTLPGVGRKTANIVLDHAFGIHDGVAVDTHVARL 148
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RLG+ + P + L P+ W +N LL+ G+T CT +P C C
Sbjct: 149 SRRLGFSS-------GKDPARIERDLMALFPQSAWGNLNYLLIRHGRTTCTARKPSCTTC 201
Query: 203 TVSEYCPSAFKESSTSSSKSKK 224
+ CPSA S + KK
Sbjct: 202 PLGSLCPSADNPSEGEPVRRKK 223
>gi|302336472|ref|YP_003801679.1| DNA-(apurinic or apyrimidinic site) lyase [Olsenella uli DSM 7084]
gi|301320312|gb|ADK68799.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Olsenella uli DSM 7084]
Length = 231
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 8/200 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F++++ LLS+ T D + L + T EA+ +AD A + ++I + F+ KA +
Sbjct: 37 FSLVICVLLSAQTTDVAVNKVTPELFRR-WPTPEAMSQADPAELGEVIRTIGFWRSKAAH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+++ + Y G++P S++EL LPG+G K AN+V+ + +V+GI VDTHV+RI R
Sbjct: 96 CVGASQMIVADYGGEVPGSMEELTRLPGVGRKTANIVLNKAFHSVEGIAVDTHVYRIATR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L + P +P Q L +P+E W +N + FG+ CT +C C +
Sbjct: 156 LRLTSAP-------TPLQAERDLLETIPRELWGPVNEQWIHFGRETCTAQHAKCEACVAA 208
Query: 206 EYCPSAFKESSTSSSKSKKS 225
+ CPSAF+ + K+ ++
Sbjct: 209 DICPSAFQPNRWFKGKTARA 228
>gi|67901332|ref|XP_680922.1| hypothetical protein AN7653.2 [Aspergillus nidulans FGSC A4]
gi|40742649|gb|EAA61839.1| hypothetical protein AN7653.2 [Aspergillus nidulans FGSC A4]
Length = 969
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 106/213 (49%), Gaps = 54/213 (25%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRL---LQNG------LHT--AEAIDKAD---- 65
P++RRF L++ +LSS TKD V A+QRL L G L T AE+I K +
Sbjct: 175 PRDRRFQTLIALMLSSQTKDTVTAVAMQRLHTELGEGGAPAIKLETEHAESIVKQEAENG 234
Query: 66 EATIKD--------------------------------LIYPVAFYTRKACNMKKIAKIC 93
E IK LI V F+ K +KK A+I
Sbjct: 235 EPAIKQEAKDGVPPANPSHDSTLNLENILAVSPERLNSLIGTVGFHNNKTKYIKKAAEII 294
Query: 94 LTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPG 153
+Y+ DIPS+ EL+ LPG+GPKMA + M+ W +GI VD HVHRI N GW
Sbjct: 295 RDQYNSDIPSTPAELMKLPGVGPKMAYLCMSAAWGKHEGIGVDVHVHRITNLWGW----- 349
Query: 154 TKQKTSSPEQTREALQRWLPKEEWVRINPLLVG 186
KT +PE+TR +L+ WLPK++W IN L G
Sbjct: 350 --HKTKTPEETRMSLESWLPKDKWHEINKLRCG 380
>gi|385802943|ref|YP_005839343.1| DNA-(apurinic or apyrimidinic site) lyase [Haloquadratum walsbyi
C23]
gi|339728435|emb|CCC39587.1| endonuclease III [Haloquadratum walsbyi C23]
Length = 228
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 8/187 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + L + TA AD + + IY + F+ KA
Sbjct: 35 RLELLIAVVLSAQCTDERVNSITADLFEK-YETATDYAAADTDELAEDIYGITFHNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+K I + + YDGD+P ++DEL AL G+G K AN+V+ G V+GI VDTHV RI
Sbjct: 94 YLKSIGETLASDYDGDVPDTMDELTALSGVGRKTANVVLQHGHDVVEGIVVDTHVQRITR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + +P+Q L +P+ EW + L + G+ CT P C C +
Sbjct: 154 RLGLTDE-------QTPKQIETDLMESVPESEWQQFTHLFISHGRETCTAQNPDCTDCIL 206
Query: 205 SEYCPSA 211
CPS+
Sbjct: 207 ESVCPSS 213
>gi|386874791|ref|ZP_10117017.1| putative endonuclease III [Candidatus Nitrosopumilus salaria BD31]
gi|386807414|gb|EIJ66807.1| putative endonuclease III [Candidatus Nitrosopumilus salaria BD31]
Length = 218
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 9/179 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F++L+ +LS+ TKD+ A++ L + E + A ++ +I + F+ K+
Sbjct: 36 FSILIGTILSARTKDEATTKAVKELFLKYKNPKE-LASAKVKDVEKIIKSIGFFHVKSKR 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AKI TKY G +P L L+ LPG+G K AN V+ F I VD HVHRI NR
Sbjct: 95 IIEVAKIIHTKYKGKVPDDLPTLIELPGVGRKTANCVLVYA-FEKPAIPVDIHVHRISNR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
LG V T +PE+T + L + + K+ W+ IN V +GQ IC P+ P C +C +
Sbjct: 154 LGLVD-------TRNPEETEQELMKKIQKKYWIDINDTFVMYGQNICKPISPMCDVCKI 205
>gi|110667504|ref|YP_657315.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Haloquadratum walsbyi DSM 16790]
gi|109625251|emb|CAJ51673.1| endonuclease III [Haloquadratum walsbyi DSM 16790]
Length = 228
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/187 (33%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + L + TA AD + + IY + F+ KA
Sbjct: 35 RLELLIAVVLSAQCTDERVNSITADLFEK-YETATDYAAADTDELAEDIYGITFHNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+K I + YDGD+P ++DEL AL G+G K AN+V+ G V+GI VDTHV RI
Sbjct: 94 YLKSIGETLAADYDGDVPDTMDELTALSGVGRKTANVVLQHGHDVVEGIVVDTHVQRITR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + +P+Q L +P+ EW + L + G+ CT P C C +
Sbjct: 154 RLGLTDE-------QTPKQIETDLMESVPESEWQQFTHLFISHGRETCTAQNPDCTDCIL 206
Query: 205 SEYCPSA 211
CPS+
Sbjct: 207 ESVCPSS 213
>gi|385809949|ref|YP_005846345.1| type III endonuclease [Ignavibacterium album JCM 16511]
gi|383801997|gb|AFH49077.1| Putative type III endonuclease [Ignavibacterium album JCM 16511]
Length = 223
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 102/185 (55%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + + L + + ++ +DE +D IY FY +KA +
Sbjct: 40 FQLLIATILSAQCTDQRVNFVTKDLFKKYKSPKDLLNVSDEELERD-IYSTGFYKQKAKS 98
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K K + K+DG +P+ DEL+ LPG+G K A++V F + I VDTHV R+ N
Sbjct: 99 IKACCKELVEKFDGKVPADFDELVKLPGVGRKTASVVAG-NAFGIPAIAVDTHVKRLSNL 157
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ T +P++ L+ LPK+ W+ + LL G+ IC RP+C C ++
Sbjct: 158 LGFAD-------TDNPDKIEMRLKELLPKDYWILSSHLLATHGRNICIARRPKCEQCVIA 210
Query: 206 EYCPS 210
+YCPS
Sbjct: 211 KYCPS 215
>gi|217967076|ref|YP_002352582.1| endonuclease III [Dictyoglomus turgidum DSM 6724]
gi|217336175|gb|ACK41968.1| endonuclease III [Dictyoglomus turgidum DSM 6724]
Length = 210
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 106/189 (56%), Gaps = 8/189 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ T D+ + ++L + + E K ++ I V +Y KA N
Sbjct: 30 WELLVATILSAQTTDERVNMVTEKLFKK-YRSPEDYLKVSLEELEQDIRSVNYYKTKAKN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ A+I + KY+G +P +++ELL LPG+ K AN+V++ G+ +GI +DTHV+R+ R
Sbjct: 89 IRACAQIIVEKYNGKVPDTMEELLKLPGVARKTANVVLSAGYGKNEGIVIDTHVNRLSKR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L G ++ EQ L + +PK+EW + LL+ G+ +C P+C C +
Sbjct: 149 LNL----GKEKNRDKLEQ---ELMKIVPKDEWANFSYLLIHHGRNVCKAKNPKCDECILK 201
Query: 206 EYCPSAFKE 214
+ CPSAF E
Sbjct: 202 DICPSAFNE 210
>gi|18977601|ref|NP_578958.1| glycosylase [Pyrococcus furiosus DSM 3638]
gi|397651727|ref|YP_006492308.1| endonuclease III [Pyrococcus furiosus COM1]
gi|18893320|gb|AAL81353.1| glycosylase putative; mutY-nth family [Pyrococcus furiosus DSM
3638]
gi|393189318|gb|AFN04016.1| endonuclease III [Pyrococcus furiosus COM1]
Length = 225
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 107/196 (54%), Gaps = 15/196 (7%)
Query: 21 PKERR-----FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLI-- 73
P+ER + L+ ++S +D+V D + L + + E I +++ +
Sbjct: 34 PRERHVSGDPYRTLIRCIISQRNRDEVTDKVSEELFKR-YKSIEEIANESVENMQEFLRK 92
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V + K + + ++I L KY G +P++L+EL+ LPGIG K AN+V+ G F I
Sbjct: 93 QKVGLWKNKGKWIVEASRIILYKYGGKVPNTLEELMKLPGIGRKCANIVLAYG-FGKPAI 151
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VDTHV+RI RLG S+PE+ E L+ +P EEW+ +N +V G++IC
Sbjct: 152 PVDTHVYRISRRLGLAPI------NSTPEKVEEILKTLIPVEEWIYVNHAMVDHGKSICR 205
Query: 194 PLRPRCGMCTVSEYCP 209
P++P+C +C ++E CP
Sbjct: 206 PIKPKCELCPLNELCP 221
>gi|269215536|ref|ZP_06159390.1| endonuclease III [Slackia exigua ATCC 700122]
gi|269131023|gb|EEZ62098.1| endonuclease III [Slackia exigua ATCC 700122]
Length = 219
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 99/183 (54%), Gaps = 10/183 (5%)
Query: 27 AVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNM 86
AV+LSA + +KV +L A A+ A A ++++I+P+ F+ KA +
Sbjct: 42 AVVLSAQCTDAAVNKVTP-----ILFAEFPDAYALANAPLARVEEIIHPLGFFRTKAKKV 96
Query: 87 KKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRL 146
A+ + + G +P ++DEL LPG+G K AN+VM + + QGI VDTHV RI +RL
Sbjct: 97 IGCAQTVVCDFGGVVPRTMDELTRLPGVGRKTANVVMAQAFRDAQGIAVDTHVFRIAHRL 156
Query: 147 GWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE 206
G+ T + +PE+ L R PK +W+ IN V FG+ C PRC C V++
Sbjct: 157 GFAT-----RNDDTPEKVELKLLRIYPKPDWLFINHQWVHFGREFCQARNPRCAECFVAD 211
Query: 207 YCP 209
CP
Sbjct: 212 VCP 214
>gi|238588806|ref|XP_002391837.1| hypothetical protein MPER_08677 [Moniliophthora perniciosa FA553]
gi|215457043|gb|EEB92767.1| hypothetical protein MPER_08677 [Moniliophthora perniciosa FA553]
Length = 305
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
Query: 4 LEPVYSLG-VDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEA 60
+ PV ++G V E D E+ L+S +LSS TKD+V D A+ +L G + E
Sbjct: 130 VAPVDTMGSVKEVDPKTRHAEQTLLTLVSLMLSSQTKDEVTDAAISQLRTALGGSISIEG 189
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ ADE TI + I V F+ RK +K+ A ++D D+P ++DEL +LPG+GPKMA
Sbjct: 190 VIAADETTISNAIGKVGFWRRKTQYLKQAAIRLRDEFDSDVPKTVDELCSLPGVGPKMAF 249
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREAL 168
+ + + W GI VD HVHRI NRLGW P T + E+TR
Sbjct: 250 LALQVAWNLNHGIGVDVHVHRITNRLGWHKPP-----TKNSEETRHVF 292
>gi|392377719|ref|YP_004984878.1| DNA-(Apurinic or apyrimidinic site) lyase [Azospirillum brasilense
Sp245]
gi|356879200|emb|CCD00104.1| DNA-(Apurinic or apyrimidinic site) lyase [Azospirillum brasilense
Sp245]
Length = 230
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+ +L+S+ T+D+ +RL T + + A + L+ F KA +
Sbjct: 48 FEQLVGSLISARTRDETTIVVCERLFAVA-RTPQQMVALTPAELTRLLDGATFPEPKARD 106
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++ +T++DG++P + D L+A G+GPK+A + + +G F + + VD HVHRI NR
Sbjct: 107 IRALSRRIITEHDGEVPDTPDALMAFHGVGPKIAALTLAVG-FGIPAVAVDVHVHRIVNR 165
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V P +PE+T AL LP+ WV IN LV FG+ ICT RPRC C +
Sbjct: 166 WGFVAAP-------TPERTMVALMELLPRHYWVEINERLVPFGKWICTGDRPRCSTCAML 218
Query: 206 EYC 208
C
Sbjct: 219 SMC 221
>gi|297617011|ref|YP_003702170.1| endonuclease III [Syntrophothermus lipocalidus DSM 12680]
gi|297144848|gb|ADI01605.1| endonuclease III [Syntrophothermus lipocalidus DSM 12680]
Length = 225
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 108/204 (52%), Gaps = 9/204 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D+ + + L + + + + + ++D+I Y +KA N
Sbjct: 31 FQLLVAVMLSARTTDEQVNRVTRGLFAE-VKSPKDLASMEVGILEDMIKGCGLYRQKARN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A+I + ++ G++P+ D+LL LPG+G K AN+V+++G F G+ VDTHV R+ R
Sbjct: 90 LIALARILMEEFGGEVPTDFDQLLRLPGVGRKTANVVVSVG-FAKPGLGVDTHVLRVSRR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW P+ L+R +P+ W R + L + G+ +C +P C CT+
Sbjct: 149 LGW-------HNARDPQVAEAELKRIIPESWWARAHHLFISHGRAVCRARKPDCDRCTIR 201
Query: 206 EYCPSAFKESSTSSSKSKKSESSS 229
YC S + +SESS+
Sbjct: 202 LYCQYGVSGQSDKAEDRLQSESSA 225
>gi|14591284|ref|NP_143362.1| endonuclease III [Pyrococcus horikoshii OT3]
gi|3257923|dbj|BAA30606.1| 222aa long hypothetical endonuclease III [Pyrococcus horikoshii
OT3]
Length = 222
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 106/195 (54%), Gaps = 10/195 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLI--YPVAFYTRKA 83
+ L+ ++S +D+V D + L + T E+I A +++ + V + K
Sbjct: 35 YKTLIRCIISQRNRDEVTDRVSEELFKR-YPTIESIASASVEEMQNFLKSLKVGLWRSKG 93
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ + ++I L KY+G +P +EL+ LPGIG K AN+V+ G F + I VDTHV+RI
Sbjct: 94 KWIVETSRIILKKYNGRVPDKFEELIKLPGIGRKCANIVLAYG-FGIPAIPVDTHVYRIS 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG +SPE+ E L+ +P+EEW+ +N +V G+++C P++PRC C
Sbjct: 153 RRLGLAPW------DASPEEVEERLKSLIPREEWIYVNHAMVDHGKSVCKPIKPRCWECP 206
Query: 204 VSEYCPSAFKESSTS 218
+ CP + ++S
Sbjct: 207 LRGLCPKIGVQDTSS 221
>gi|291460248|ref|ZP_06599638.1| endonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417195|gb|EFE90914.1| endonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
Length = 232
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 98/185 (52%), Gaps = 13/185 (7%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
FA +LSA + +KV D LL + + D ++ I+ + FY KA N
Sbjct: 44 FATILSAQCTDARVNKVTD-----LLYRKYRSVQDFADCDLRELERDIHSIGFYHSKARN 98
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K A + L KY G +P L+EL ALPG+G K AN+++ + I VDTHV R+ NR
Sbjct: 99 LKACAAVLLEKYGGRVPDQLEELTALPGVGRKTANLILGRV-YGKAAIVVDTHVRRVSNR 157
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG K+S P +T LQ +P+E W R N ++ G+T C+ L+P+C C +
Sbjct: 158 LGLA-------KSSDPLKTELQLQDSIPREFWTRWNTRVMALGRTRCSSLKPKCESCYLK 210
Query: 206 EYCPS 210
+ CPS
Sbjct: 211 DLCPS 215
>gi|37521390|ref|NP_924767.1| endonuclease III [Gloeobacter violaceus PCC 7421]
gi|35212387|dbj|BAC89762.1| endonuclease III [Gloeobacter violaceus PCC 7421]
Length = 220
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 12/197 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ VL+S ++S T+++ QR+ A ++ ADE + L+ + K
Sbjct: 35 YRVLVSTVISQRTREEQTTAVSQRVFARYPDMA-SLAAADEKELLVLLAGSEYREAKGPR 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A I L KY G +P +D LLALPGIG K AN V+ FN + ICVDTH+H+I NR
Sbjct: 94 LIAMATILLEKYGGRVPDDIDALLALPGIGRKTANCVLIYA-FNREAICVDTHMHKIANR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC-TPLRPRCGMCTV 204
LGWVT T +PEQT +AL+ +P++ W N L + G+ IC + P C C V
Sbjct: 153 LGWVT-------TKTPEQTEKALEVVMPRDLWAGSNRLFLQHGRAICLSGAPPLCSRCPV 205
Query: 205 SEYCPSAFKESSTSSSK 221
+C A+ + T+ +
Sbjct: 206 RPWC--AYGQEPTARKR 220
>gi|335046189|ref|ZP_08539212.1| endonuclease III [Oribacterium sp. oral taxon 108 str. F0425]
gi|333759975|gb|EGL37532.1| endonuclease III [Oribacterium sp. oral taxon 108 str. F0425]
Length = 240
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 108/204 (52%), Gaps = 9/204 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L + +LS+ D + ++L Q + E D +++ I+ FY KA N
Sbjct: 40 WQLLFATILSAQCTDARVNMVTEKLFQK-YKSLEDFASCDLKELEEDIHSTGFYHNKAKN 98
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K A + +Y G++P +D L ALPG+G K N+++ F++ I VDTHV RI NR
Sbjct: 99 IKACAAALVEEYGGEVPKDIDSLTALPGVGRKTGNLILG-NIFHIPSIVVDTHVKRISNR 157
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG +S P +T L LP+E W+R N ++ G+T+CT +P+C +C ++
Sbjct: 158 LGLAD-------SSDPTKTEFQLMEVLPEEFWIRWNTHIIALGRTLCTSQKPKCELCYLN 210
Query: 206 EYCPSAFKESSTSSSKSKKSESSS 229
+ CPS + T S +++ + +
Sbjct: 211 DLCPSVKGDPETWRSPAERKKEKT 234
>gi|346311311|ref|ZP_08853318.1| endonuclease III [Collinsella tanakaei YIT 12063]
gi|345901141|gb|EGX70949.1| endonuclease III [Collinsella tanakaei YIT 12063]
Length = 222
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 106/186 (56%), Gaps = 5/186 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +++S LLS+ T D + L + T EA+ A A + ++I + FY KA +
Sbjct: 37 FRLVISVLLSAQTTDAQVNKVTPALFER-WPTPEAMAGATAAEVAEVIKSLGFYKTKAKH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ A++ + Y G++P+ + EL+ LPG+G K AN+V+ + + V GI VDTHV+RI +R
Sbjct: 96 CVEAAQMIVADYGGEVPADMKELVKLPGVGRKTANIVLNVAFGIVDGIAVDTHVNRIAHR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L P T +K P +T + L + LP+E W +N + G+ IC +P CG C ++
Sbjct: 156 LK--LSPKTHEK--EPLKTEQDLLKILPREYWNDVNHQWIMLGREICDARKPLCGECPLA 211
Query: 206 EYCPSA 211
+ CPSA
Sbjct: 212 DICPSA 217
>gi|302385477|ref|YP_003821299.1| endonuclease III [Clostridium saccharolyticum WM1]
gi|302196105|gb|ADL03676.1| endonuclease III [Clostridium saccharolyticum WM1]
Length = 218
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 9/196 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L + +LS+ + DK + L +L Q TAE + +A I++ I + Y KA N
Sbjct: 30 WQLLAAIMLSAQSTDKQVEEVLPQLFQR-FRTAEQMAEAPLEEIEEAIRTIGLYKNKARN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ G +P +D++L L G+G K A + + + + GI VDTHV RI R
Sbjct: 89 LKKCCGQIANEFGGQVPGDIDKILTLAGVGRKTATLFLADA-YGIPGITVDTHVFRISRR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW + +P Q LQR LPK+ W RIN L+ G+ +CT + CG C V
Sbjct: 148 LGWAS-------GKNPAQVEMELQRILPKDHWNRINFQLIYHGREVCTARKANCGECMVR 200
Query: 206 EYCPSAFKESSTSSSK 221
E+C K
Sbjct: 201 EWCGQILDRDKKGDKK 216
>gi|378548995|ref|ZP_09824211.1| hypothetical protein CCH26_02870 [Citricoccus sp. CH26A]
Length = 259
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L Y V E D + P F +L++ +LS+ T D + L AE +
Sbjct: 17 RVLAEAYPYAVAELDFTTP-----FELLVATVLSAQTTDVRVNATTPALFAR-FPDAEVM 70
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
ADE +++L+ P+ FY KA ++ +++ + ++ G++P LD+L+ALPG+G K A +
Sbjct: 71 AHADERELQELVRPLGFYRNKAAAIQGLSRALVERHGGEVPGRLDDLVALPGVGRKTAFV 130
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V G+ VDTH R+ RLG+ Q P + + + + +W ++
Sbjct: 131 VLG-NAFGVPGLTVDTHFGRLARRLGFTAQ-------QDPVKVEQEVAALFERRDWTMLS 182
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
L+ G+ +C RP CG C V+ +CPS
Sbjct: 183 HRLIFHGRRVCHAKRPACGACPVARWCPS 211
>gi|448729244|ref|ZP_21711562.1| endonuclease III [Halococcus saccharolyticus DSM 5350]
gi|445795639|gb|EMA46163.1| endonuclease III [Halococcus saccharolyticus DSM 5350]
Length = 227
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 104/192 (54%), Gaps = 8/192 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
RF +L++ +LS+ D+ + L + + EA A + + + + + +Y KA
Sbjct: 35 RFELLVAVILSAQCTDERVNETTADLFET-YSSPEAFANAPQEELAEALNSITYYNNKAS 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+++ A+I + ++DG++P ++ EL LPG+G K AN+V+ G V+GI VDTHV RI
Sbjct: 94 YIRESAQIVVDEHDGEVPDTMTELTDLPGVGRKTANVVLQHGHDVVEGIVVDTHVQRITR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG T +K PE+ L ++P++ W L + G+ CT P C CT+
Sbjct: 154 RLGL-----TDEK--RPEKIETDLMAFVPEDRWQAFTHLFISHGRATCTARNPDCADCTL 206
Query: 205 SEYCPSAFKESS 216
+ CPS+ +S+
Sbjct: 207 EDICPSSKADSA 218
>gi|337283826|ref|YP_004623300.1| endonuclease III [Pyrococcus yayanosii CH1]
gi|334899760|gb|AEH24028.1| endonuclease III [Pyrococcus yayanosii CH1]
Length = 234
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 15/198 (7%)
Query: 21 PKERR-----FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLI-- 73
P+ER + L+ ++S +D+V D + L + T I A +++ +
Sbjct: 39 PRERHVSGEPYRTLIKCIISQRNRDEVTDRVAEELFRK-YPTINDIANASVEKMQEFLRS 97
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
V + K + ++++I L +YDG +P +L+EL+ LPGIG K AN+V+ G F I
Sbjct: 98 LKVGLWRSKGRWIVEVSRIILERYDGRVPDTLEELMKLPGIGRKCANIVLAYG-FGKPAI 156
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VDTHV+R+ RLG +SPE+ E L+ +PKEEW+ +N +V G+ +C
Sbjct: 157 PVDTHVNRVSKRLGLAPL------EASPEKVEEYLKVLIPKEEWLYVNHAMVDHGKKVCR 210
Query: 194 PLRPRCGMCTVSEYCPSA 211
P++P+C C V CP
Sbjct: 211 PIKPKCNECPVRNLCPKV 228
>gi|363896810|ref|ZP_09323359.1| endonuclease III [Oribacterium sp. ACB7]
gi|361960375|gb|EHL13624.1| endonuclease III [Oribacterium sp. ACB7]
Length = 240
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 109/204 (53%), Gaps = 9/204 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L + +LS+ D + ++L Q + E + +++ I+ FY KA N
Sbjct: 40 WQLLFATILSAQCTDARVNMVTEKLFQK-YKSLEDFASCNLKELEEDIHSTGFYHNKAKN 98
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K A + + +Y G++P +D L ALPG+G K N+++ F++ I VDTHV RI NR
Sbjct: 99 IKACATVLVEEYGGEVPKDIDSLTALPGVGRKTGNLILG-NIFHIPSIVVDTHVKRISNR 157
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG +S P +T L LP+E W+R N ++ G+T+CT +P+C +C ++
Sbjct: 158 LGLAD-------SSDPTKTEFQLMDVLPEEFWIRWNTHIIALGRTLCTSQKPKCELCYLN 210
Query: 206 EYCPSAFKESSTSSSKSKKSESSS 229
+ CPS + T S +++ + +
Sbjct: 211 DLCPSVKGDPETWRSPAERKKEKA 234
>gi|218782481|ref|YP_002433799.1| endonuclease III [Desulfatibacillum alkenivorans AK-01]
gi|218763865|gb|ACL06331.1| endonuclease III [Desulfatibacillum alkenivorans AK-01]
Length = 210
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + L T E I + +++LI+ F+ KA
Sbjct: 32 FQLLIATMLSAQCTDKQVNSVTPALFARA-STPEEIMEVPLKELEELIHATGFFHTKAKR 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+ A + K+ G +P ++ LLALPG+G K AN+V+ F + GI VDTHV RI R
Sbjct: 91 VKECAAALMEKHGGVVPRDMESLLALPGVGRKTANVVLNAA-FEIPGIVVDTHVQRISQR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ K P + L + LPKE W+ + L+ G+ +CT +P+CG CT++
Sbjct: 150 LGFT-------KFKDPVKIEFDLMKLLPKESWIDFSLHLIYHGRAVCTARKPKCGECTLA 202
Query: 206 EYCPSAFK 213
E+C A K
Sbjct: 203 EWCKGAGK 210
>gi|56758404|gb|AAW27342.1| unknown [Schistosoma japonicum]
Length = 124
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/106 (54%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 108 LLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREA 167
L+ L G+GPKMA + M W V GI VDTHVHRI NRL W +P T +PE+TR A
Sbjct: 12 LIILLGVGPKMAYLAMKCAWKKVTGIGVDTHVHRITNRLKWSKRP-----TKTPEETRMA 66
Query: 168 LQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
L+ WLP+E W IN LLVGFGQ IC P+ P C C CPSA K
Sbjct: 67 LEEWLPREYWDEINLLLVGFGQQICRPVNPNCMGCLNRSICPSASK 112
>gi|399889193|ref|ZP_10775070.1| endonuclease III [Clostridium arbusti SL206]
Length = 214
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 121/220 (55%), Gaps = 15/220 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K L VY+ + S P + +L+S +LS+ DK + ++L +T E
Sbjct: 10 LKILSEVYNDAKCALNFSSP-----YELLISTILSAQCTDKRVNIVTEKLFSE-YNTPEK 63
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ + + +++ I P FY K+ N+ ++ L Y+ ++PS++++L+ LPG+G K AN
Sbjct: 64 MVELTDEELQEKIKPCGFYRNKSKNILATSRALLFDYNSEVPSAMEDLIKLPGVGRKTAN 123
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+VM+ FN+ I VDTHV R+ R+G+ + +P + E L++ +PK+ W
Sbjct: 124 VVMS-NAFNIPAIAVDTHVFRVSKRIGFAS-------GDTPLKVEEELRKVIPKKLWSNA 175
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSS 220
+ L+ G+ IC +P+C +C +SEYC + +KE+ S S
Sbjct: 176 HHYLIWHGRQICKSRKPQCEICPISEYC-NYYKENFISRS 214
>gi|257389142|ref|YP_003178915.1| endonuclease III [Halomicrobium mukohataei DSM 12286]
gi|257171449|gb|ACV49208.1| endonuclease III [Halomicrobium mukohataei DSM 12286]
Length = 228
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + L + +A +ADE + + IY + F+ KA
Sbjct: 35 RLELLVAVVLSAQCTDERVNEVTADLFEK-YQSARDYAEADEEQLAEDIYGITFHNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+ +I + +YDG +P ++ L LPG+G K AN+V+ G V+GI VDTHV RI
Sbjct: 94 YLTAAGQIMVEEYDGAVPDTMSGLTDLPGVGRKTANVVLQHGHDVVEGIVVDTHVQRITR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE E L +P+ EW + LL+ G+ +C P CG C +
Sbjct: 154 RLGLTDE-------ERPEAIEEDLMPIVPESEWQQFTHLLIDHGRAVCDARNPDCGDCVL 206
Query: 205 SEYCPS 210
++ CPS
Sbjct: 207 ADICPS 212
>gi|338532530|ref|YP_004665864.1| base excision DNA repair protein [Myxococcus fulvus HW-1]
gi|337258626|gb|AEI64786.1| base excision DNA repair protein [Myxococcus fulvus HW-1]
Length = 211
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T+D+V+ A LLQ T EA+ + I +I PV F+ KA
Sbjct: 29 FEQLVACILSIRTRDEVSLPASLALLQRAA-TPEALARLSPEDIDAIIQPVTFHEAKAWQ 87
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA ++ G++P L + G+GPK A++ + + + + I VD HVHR+ NR
Sbjct: 88 LHAIATRTRDEFGGELPCDAQVLQSFKGVGPKCAHLALGIACGH-EAISVDIHVHRVTNR 146
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V + +PE T EAL+ LP+ WV +N LLV FG+ +CT RPRC C V
Sbjct: 147 WGYV-------RARTPEATLEALEAVLPRAYWVELNRLLVPFGKHVCTGTRPRCSTCPVL 199
Query: 206 EYC 208
+C
Sbjct: 200 RFC 202
>gi|315230941|ref|YP_004071377.1| endonuclease III [Thermococcus barophilus MP]
gi|315183969|gb|ADT84154.1| endonuclease III [Thermococcus barophilus MP]
Length = 236
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 101/188 (53%), Gaps = 10/188 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP--VAFYTRKA 83
F L+ ++S +D+V D + LL N T A+ A ++ L+ V + K
Sbjct: 45 FFTLIRCIISQRNRDEVTD-RVSELLFNRYPTVHALANAKIEDVQKLLRENGVGLWKNKG 103
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ + ++I L KY G +P L+EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 104 KWIVECSRIILEKYGGKVPDMLEELVKLPGIGRKCANIVLAYG-FGKQAIPVDTHVNRIS 162
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P + PE+ E L+ +PKE W+ +N +V G+ IC P+ PRC C
Sbjct: 163 KRLG-LAPP-----KAPPEKVEEYLKELIPKELWIYVNHAMVDHGKAICRPISPRCDECP 216
Query: 204 VSEYCPSA 211
+ CP A
Sbjct: 217 LKTLCPYA 224
>gi|257064026|ref|YP_003143698.1| endonuclease III [Slackia heliotrinireducens DSM 20476]
gi|256791679|gb|ACV22349.1| endonuclease III [Slackia heliotrinireducens DSM 20476]
Length = 210
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
L +Y G D + P F++ ++ +LS+ D + L T +
Sbjct: 12 LFAIYGEGECSLDHADP-----FSLTVAVILSAQCTDAAVNKVTPALFAK-YPTPADLAA 65
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
A ++D+I+P+ F+ KA N+ A+ + Y G+IP S++ L +LPG+G K AN+VM
Sbjct: 66 AKLQDVEDIIHPLGFFHSKAKNLIACAQKVVADYGGEIPESMEGLQSLPGVGRKTANVVM 125
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
+ N QGI VDTHV RI +RLG+ T + +P++ L + P+ +W+ IN
Sbjct: 126 CQAFRNAQGIAVDTHVFRIAHRLGFAT-----RNDDTPDKVEAKLLKVYPQTDWLYINHQ 180
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCP 209
V FG+ C+ P+C C + + CP
Sbjct: 181 WVHFGREFCSARNPKCLTCPIHDLCP 206
>gi|444911067|ref|ZP_21231243.1| Endonuclease III [Cystobacter fuscus DSM 2262]
gi|444718405|gb|ELW59218.1| Endonuclease III [Cystobacter fuscus DSM 2262]
Length = 232
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T+D+V+ RLL T EA+ + ++ LI PV F KA
Sbjct: 50 FEQLVACILSIRTRDEVSLPVALRLLSTA-RTPEAMRRLGTERLQALIRPVTFPEPKART 108
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA + ++ G +P+ ++ L + G+GPK A++ + + I VD HVHR+ NR
Sbjct: 109 IHDIAVRAVEEFVGALPADVEVLQSFKGVGPKCAHLALGIAGGQTY-ISVDVHVHRVTNR 167
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PEQT AL+ LP+ WV +N LLV FG+ +CT +RPRC C V
Sbjct: 168 WGYV-------HTRTPEQTLAALEAKLPRAHWVELNRLLVPFGKHVCTGVRPRCSTCPVL 220
Query: 206 EYC 208
C
Sbjct: 221 SMC 223
>gi|339444803|ref|YP_004710807.1| putative EndoIII protein [Eggerthella sp. YY7918]
gi|338904555|dbj|BAK44406.1| predicted EndoIII protein [Eggerthella sp. YY7918]
Length = 220
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F + ++ LLS+ T DK + L + T + AD ++++I + FY KA N
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPALWER-YPTPADLAAADVHDVENIIRTIGFYHTKASN 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K A++ + Y G+IP +DEL LPG+G K AN+V+ + V+GI VDTHV RI +R
Sbjct: 97 VIKCAQMVVADYAGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHR 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L + + +P +T AL + P+E W IN V FG+ CT P+C C +
Sbjct: 157 LKF-----AGPSSDTPAKTETALLKLYPREYWGPINHQWVLFGRETCTARNPKCAECFLC 211
Query: 206 EYCPSAFK 213
+ CPS K
Sbjct: 212 DLCPSCCK 219
>gi|328956172|ref|YP_004373505.1| DNA-(apurinic or apyrimidinic site) lyase [Coriobacterium glomerans
PW2]
gi|328456496|gb|AEB07690.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Coriobacterium glomerans PW2]
Length = 220
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +++S LLS+ T D + L TAEA+ A + D+I + FY K
Sbjct: 34 ENPYRLVISVLLSAQTTDAQVNRVTPELFAR-WPTAEALASASPEEVADVIRSLGFYKTK 92
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A + + A++ ++ + G++P+ + +L+ LPG+G K AN+V+ + + V+GI VDTHV+RI
Sbjct: 93 AKHAVEAAQMIVSDFGGEVPADMKQLMRLPGVGRKTANIVLNVSFNIVEGIAVDTHVNRI 152
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
+RLG + + P +T + L LP + W +N + G+ IC PRC +C
Sbjct: 153 AHRLGL----SPRTHLNDPLKTEQDLLGLLPSQWWGSVNHQWIKLGREICIARNPRCNLC 208
Query: 203 TVSEYCPSA 211
+++ CPSA
Sbjct: 209 PLADICPSA 217
>gi|357400465|ref|YP_004912390.1| Endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386356517|ref|YP_006054763.1| endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766874|emb|CCB75585.1| Endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365807025|gb|AEW95241.1| endonuclease III [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 330
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ T D + L T E + AD +++++ P F+ K
Sbjct: 100 ENPFQLLVATVLSAQTTDLRVNMTTPALFAR-YPTPEEMAAADPQELEEIVRPTGFFRAK 158
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A ++ ++ ++ G++P L++L+ LPG+G K AN+V+ F V GI VDTH R+
Sbjct: 159 ARSLLGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANVVLG-NAFGVPGITVDTHFGRL 217
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
R GW T + PE+ E + PK EW ++ L+ G+ +C +P CG C
Sbjct: 218 ARRFGWTT-------SEDPEKIEEEVGSLFPKSEWTMLSHRLIFHGRRVCHSRKPACGAC 270
Query: 203 TVSEYCPSAFKESSTSSSKSKK 224
++ CPS + E T K++K
Sbjct: 271 PIAPLCPS-YGEGETDPDKARK 291
>gi|193083940|gb|ACF09617.1| endonuclease III [uncultured marine crenarchaeote AD1000-325-A12]
Length = 212
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 106/189 (56%), Gaps = 8/189 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ DK+ + ++L + + ++ + AD +K++I +Y+ K
Sbjct: 26 ESIFQLLIATILSAQCTDKIVNKTTKKLFKKYPNVSD-LANADIRNVKNIIKSTGYYSLK 84
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A +K +K Y+ +P ++++LL L G+G K AN+V+++G+ GI VDTHV R+
Sbjct: 85 ANRIKNTSKRLKNNYNSKVPDNMEDLLTLDGVGRKTANIVLSVGFNKNVGIAVDTHVIRL 144
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRL K ++PE+ L + LPKE W + + LL+ G+ IC +P C C
Sbjct: 145 SNRLKLT-------KNTNPEKIEIDLIKILPKELWNKFSILLILHGRNICQAKKPDCSNC 197
Query: 203 TVSEYCPSA 211
+++ CP A
Sbjct: 198 VLNDLCPYA 206
>gi|377573320|ref|ZP_09802384.1| endonuclease III [Mobilicoccus pelagius NBRC 104925]
gi|377537982|dbj|GAB47549.1| endonuclease III [Mobilicoccus pelagius NBRC 104925]
Length = 283
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 102/191 (53%), Gaps = 13/191 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + +KV R AEA+ AD ++ LI P F+
Sbjct: 74 PFELLVATVLSAQSTDVGVNKVTPALFARYPD-----AEALAGADREELETLIRPTGFFR 128
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ ++ + ++DG++P+SL L+ LPG+G K AN+V+ F++ GI VDTH
Sbjct: 129 SKASSLLGLSAALVERHDGEVPASLPALVELPGVGRKTANVVLG-NAFDIPGITVDTHFG 187
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLGW + P + EA+ +P++EW ++ +L+ G+ C RP CG
Sbjct: 188 RVVRRLGWTDE-------EDPVKVEEAVGALVPRKEWTMLSHVLIFHGRRTCHSRRPACG 240
Query: 201 MCTVSEYCPSA 211
C V+ +C SA
Sbjct: 241 ACAVARWCDSA 251
>gi|255994514|ref|ZP_05427649.1| endonuclease III [Eubacterium saphenum ATCC 49989]
gi|255993227|gb|EEU03316.1| endonuclease III [Eubacterium saphenum ATCC 49989]
Length = 211
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ ++++ LS+ T DK + L + T EA+ KAD + D+I+ + Y K+ N
Sbjct: 30 YELIVAVALSAQTTDKSVNKITPELFK-AYPTTEALAKADVNDVMDIIHTIGMYKVKSKN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A Y GD+PSS +EL +LPG+G K AN+V +G FN+ + VDTHV R R
Sbjct: 89 IIALANKLQNDYGGDVPSSYEELESLPGVGRKTANVVRAVG-FNIPSLAVDTHVFRTGKR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+ ++ ++ L + +PK+ W+R + L+ G+ +CT P+C +C +
Sbjct: 148 IGF-------SNGNTVDKVERDLMKIIPKKRWIRAHHSLIFHGRNLCTARNPKCNLCDIM 200
Query: 206 EYC 208
+YC
Sbjct: 201 KYC 203
>gi|374628503|ref|ZP_09700888.1| endonuclease III [Methanoplanus limicola DSM 2279]
gi|373906616|gb|EHQ34720.1| endonuclease III [Methanoplanus limicola DSM 2279]
Length = 217
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 106/196 (54%), Gaps = 8/196 (4%)
Query: 13 DETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL 72
++T+ + + F +L+ +LS+ T D+ + RL + ++ A+ + I+++
Sbjct: 20 EDTNLNFLEFDNPFQILIMTILSAQTTDRTVNSVKGRLFE-AYPDPHSMADAEISKIEEI 78
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I P FY K+ N++ +++ + +YDG +P S++EL+ LPG+G K AN+V+ + G
Sbjct: 79 IRPTGFYRAKSKNIRGASEMLVREYDGVVPDSMEELIKLPGVGRKTANIVLNHAYGIDAG 138
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VDTHV R+ RLG + P++ L P+E W ++N LL+ G+ +C
Sbjct: 139 IAVDTHVKRVSYRLGMT-------DNTDPDKIERDLTALYPQEVWGKMNFLLISHGRAVC 191
Query: 193 TPLRPRCGMCTVSEYC 208
+P C C + +YC
Sbjct: 192 DAKKPACERCCIKDYC 207
>gi|386867584|ref|YP_006280578.1| EndoIII-related endonuclease [Bifidobacterium animalis subsp.
animalis ATCC 25527]
gi|385701667|gb|AFI63615.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. animalis ATCC 25527]
Length = 247
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 113/207 (54%), Gaps = 4/207 (1%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L + TAEA+ A ++ +I P+ FY KA +
Sbjct: 37 FELLVATILSAQTTDKRVNSITPELF-DTYPTAEALADARLEDVESIIRPLGFYHVKAEH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A+ + ++ G++P +++EL +LPG+G K AN+V+ F+V G VDTHV R+ R
Sbjct: 96 IIAVARQIVERFGGEVPQTMEELTSLPGVGRKTANVVLG-NAFHVPGFPVDTHVIRVTGR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + + ++PE+ + + P+ EW ++ L+ FG+ ICT P C C +
Sbjct: 155 LHW--RDDWMKANTTPERIEQEITGCFPESEWTDLSHRLIIFGRNICTSRSPECETCPLL 212
Query: 206 EYCPSAFKESSTSSSKSKKSESSSLRK 232
CPSA ++ + ++ + RK
Sbjct: 213 PTCPSAGGFLEIAAERKARATQRARRK 239
>gi|289548031|ref|YP_003473019.1| endonuclease III [Thermocrinis albus DSM 14484]
gi|289181648|gb|ADC88892.1| endonuclease III [Thermocrinis albus DSM 14484]
Length = 205
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 107/186 (57%), Gaps = 8/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + +L + T + + +A I++ I V +Y KA
Sbjct: 27 FQLLVAVILSAQTTDAKVNQITPKLFER-FPTPKDLAEAPLEEIEEYIRSVNYYRNKAKF 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+ ++I + KY G++P ++DEL+ALPGIG K A+M++ + +GI VDTHV R+ R
Sbjct: 86 LKEASRILVEKYGGEVPKTIDELVALPGIGRKSASMILYNAYGINEGIAVDTHVARVSQR 145
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + + P++ + L + PKE+W +++ LL+ G+ +CT P+ C +
Sbjct: 146 LGLTSH-------TDPQKIEKDLMQITPKEDWGKLSNLLILLGRYVCTAKNPQHHKCVLR 198
Query: 206 EYCPSA 211
+ CPSA
Sbjct: 199 DICPSA 204
>gi|167391460|ref|XP_001739785.1| endonuclease III [Entamoeba dispar SAW760]
gi|165896410|gb|EDR23825.1| endonuclease III, putative [Entamoeba dispar SAW760]
Length = 147
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 87/150 (58%), Gaps = 7/150 (4%)
Query: 66 EATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTL 125
E + + I V FYT KA +K+ I +++ +P + +LL+LPG+GPK+A++++++
Sbjct: 5 EKVLINCIKGVGFYTTKAKRLKRCCVIMKEQFNNQVPQTKQDLLSLPGVGPKIASLILSI 64
Query: 126 GWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLV 185
G+ ++ + +DTH+ I +RLGW SSPE+ R L+ WLPKEEW N +V
Sbjct: 65 GFDRLESLAIDTHIFVISHRLGWAD-------GSSPEKVRLQLESWLPKEEWSLFNKSIV 117
Query: 186 GFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
FGQ C + P+C C + + C K +
Sbjct: 118 AFGQCCCRKIHPKCKQCPIQDKCHYYHKST 147
>gi|227873069|ref|ZP_03991363.1| DNA-(apurinic or apyrimidinic site) lyase [Oribacterium sinus
F0268]
gi|227841050|gb|EEJ51386.1| DNA-(apurinic or apyrimidinic site) lyase [Oribacterium sinus
F0268]
Length = 250
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 9/195 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L + +LS+ D + ++L +A D +++ I+ FY K
Sbjct: 37 ENAWQLLFATILSAQCTDARVNMVTEKLFVK-YKDLQAFVDCDLKELEEDIHSTGFYHNK 95
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A NMK AK + +Y G++P +++ L LPG+G K N+++ +++ I VDTHV RI
Sbjct: 96 AKNMKACAKALVEEYGGEVPRNIEALTGLPGVGRKTGNLILG-NIYHIPSIVVDTHVKRI 154
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRLG P P + L LP+E W+R N ++ G+T+CT P+CG C
Sbjct: 155 SNRLGLADSP-------DPTKVEFQLMEHLPEEFWIRWNTHIIALGRTLCTSQNPKCGEC 207
Query: 203 TVSEYCPSAFKESST 217
+ + CPS+ K+ T
Sbjct: 208 YLQDLCPSSKKDPET 222
>gi|452944641|ref|YP_007500806.1| endonuclease III [Hydrogenobaculum sp. HO]
gi|452883059|gb|AGG15763.1| endonuclease III [Hydrogenobaculum sp. HO]
Length = 211
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +L++ KD+ + ++++ + +A+ +A IK+ I ++FY +KA
Sbjct: 31 FELLIETVLAAQEKDEKVN-SIRKSFFSKFKNPKALKEAPLEEIKEAIKSISFYNKKAIA 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+IA I + KY+ +P DELL LPG+G K ANMV+ F I VD HVHRI R
Sbjct: 90 IKEIATILVDKYNSQVPDEEDELLKLPGVGRKTANMVLA-NAFRKPAIAVDRHVHRIVQR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG K P++T E L+ + KE W LL+ + +CT P+C C +
Sbjct: 149 LGL-------DKNKDPDKTTEHLKSIVDKELWTTFYLLLLRHAKEVCTAKNPKCQECVLK 201
Query: 206 EYCPS 210
+ C S
Sbjct: 202 DICES 206
>gi|206900947|ref|YP_002250401.1| endonuclease III [Dictyoglomus thermophilum H-6-12]
gi|206740050|gb|ACI19108.1| endonuclease III [Dictyoglomus thermophilum H-6-12]
Length = 210
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 102/185 (55%), Gaps = 8/185 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T D+ + ++L + T E K ++ I + +Y KA N++
Sbjct: 32 LLVATILSAQTTDERVNMVTEKLFKK-YKTPEDYLKVPLEELEQDIKSINYYRTKAKNIR 90
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
A+I L KY G +P +++ELL LPG+ K AN+V++ G+ +GI VDTHV R+ R
Sbjct: 91 ACAQIILEKYGGKVPDTMEELLKLPGVARKTANVVLSAGYGKNEGIVVDTHVDRLSKRFN 150
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
K + ++ + L + +P+EEW + LL+ G+ +C P+C C +++
Sbjct: 151 L-------SKEKNRDKLEQDLMKIVPREEWANFSYLLIHHGRNVCKAKNPKCDECILNDI 203
Query: 208 CPSAF 212
CPSAF
Sbjct: 204 CPSAF 208
>gi|410670967|ref|YP_006923338.1| endonuclease III [Methanolobus psychrophilus R15]
gi|409170095|gb|AFV23970.1| endonuclease III [Methanolobus psychrophilus R15]
Length = 219
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + Q L +N HT E AD IY FY +KA ++
Sbjct: 42 LLVATILSAQCTDRQVNVVTQSLFRN-YHTVEDYAAADVREFGKEIYSTGFYHQKAKHII 100
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
A+I L++++G +P +++ LL LPG+G K AN+V++ + ++GI VDTHV R+ RLG
Sbjct: 101 TSAQIMLSEFNGQVPDTMEGLLKLPGVGRKTANIVLSRAFGRIEGIAVDTHVKRLSRRLG 160
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ + PE+ L +EE ++ L+ G+++C +P+C +C V+
Sbjct: 161 FT-------RHEDPEKIERDLMAIAKREELEALSMTLILHGRSVCVARKPKCEVCVVNRL 213
Query: 208 CPSA 211
CPS+
Sbjct: 214 CPSS 217
>gi|435852528|ref|YP_007314114.1| endonuclease III [Methanomethylovorans hollandica DSM 15978]
gi|433663158|gb|AGB50584.1| endonuclease III [Methanomethylovorans hollandica DSM 15978]
Length = 217
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + Q L + T E AD + IY FY +KA ++
Sbjct: 40 LLVATILSAQCTDRQVNQVTQSLFKR-YRTLEDYAAADVSAFGKEIYSTGFYHQKAKHII 98
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ A+I LT + G +P ++++LL LPG+G K AN+V++ + ++GI VDTHV R+ NRLG
Sbjct: 99 ESARIMLTDFGGKVPDTMEDLLQLPGVGRKTANIVLSRAFGKIEGIAVDTHVKRLSNRLG 158
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ PE+ + L R +E+ ++ L+ G+ +C P+C C V E
Sbjct: 159 FTQH-------EDPEKIEKDLMRIAKREDLETLSMTLILHGRNVCMARNPKCVECVVKEL 211
Query: 208 CPSA 211
CPS+
Sbjct: 212 CPSS 215
>gi|430743238|ref|YP_007202367.1| endoIII-related endonuclease [Singulisphaera acidiphila DSM 18658]
gi|430014958|gb|AGA26672.1| putative endoIII-related endonuclease [Singulisphaera acidiphila
DSM 18658]
Length = 221
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+ +L+S+ T D+ RL T + +E+ I++L+ F KA +
Sbjct: 39 FEQLVGSLISARTHDETTLTVCLRLFAVA-RTPAQMAALEESRIRELLRGTTFADVKARD 97
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++++++ + ++ G +P++L+ L A G+GPK+A + + +G F I VD HVHRI NR
Sbjct: 98 LRELSRRIVEEHQGVVPNTLEGLTAFRGVGPKIAALTLAVG-FGQPAIAVDIHVHRIVNR 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V+ T SPE+T E L LP+ W+ IN LV FG+ ICT RP+C C +
Sbjct: 157 WGYVS-------THSPEKTAEVLSETLPQHYWIEINERLVPFGKFICTGTRPKCSTCVLL 209
Query: 206 EYC 208
C
Sbjct: 210 SMC 212
>gi|73668114|ref|YP_304129.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
gi|72395276|gb|AAZ69549.1| endonuclease III [Methanosarcina barkeri str. Fusaro]
Length = 235
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 104/184 (56%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ + D + ++L + TAE AD +++ +Y FY KA N+K
Sbjct: 53 LLVATVLSAQSTDVQINRVTEKLFKK-YRTAEDYASADLRELENDLYSTGFYKSKAKNIK 111
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
A++ + KY+G++P +++EL +LPG+G K AN+V+ + V+G+ VDTHV R+ RLG
Sbjct: 112 TAAQMIVEKYNGEVPKTMEELTSLPGVGRKTANIVLARAFGVVEGVAVDTHVKRVSRRLG 171
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
K S P + + + +E+ I+ L+ G+ +C +P+C +C V +
Sbjct: 172 LT-------KNSDPAKIEQDIVSLARREDLDSISMTLIYHGRKVCQAKKPKCKICIVKDL 224
Query: 208 CPSA 211
CPS+
Sbjct: 225 CPSS 228
>gi|336421321|ref|ZP_08601480.1| endonuclease III [Lachnospiraceae bacterium 5_1_57FAA]
gi|336001507|gb|EGN31644.1| endonuclease III [Lachnospiraceae bacterium 5_1_57FAA]
Length = 208
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ D + + L + +A A AD ++ I P FY KA N
Sbjct: 30 WQLLIATMLSAQCTDSRVNIVTESLFKK-YPSASAFASADLKELEQDIKPTGFYHNKAKN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K + KYDG++P SL+EL +L G+G K AN++ ++ + VDTHV RI NR
Sbjct: 89 IISCMKDIVDKYDGEVPKSLEELTSLAGVGRKTANVIRG-NIYHEPSVVVDTHVKRISNR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG K PE+ + L + LPK+ W+ N ++ FG+TICT PRC C +
Sbjct: 148 LGLT-------KNQDPEKIEQDLMKELPKDHWILYNIQIITFGRTICTARSPRCEECFLQ 200
Query: 206 EYC 208
+YC
Sbjct: 201 KYC 203
>gi|406993656|gb|EKE12770.1| Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase)
[uncultured bacterium]
Length = 221
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 99/184 (53%), Gaps = 8/184 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ T DK + RL + + E + AD ++ I+ V F+ KA +
Sbjct: 45 VAVMLSAQTTDKKVNEITSRLF-SKYKSWEDLANADLKELQSSIWGVNFHLGKAERIISA 103
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
AK+ LT++ G +P ++ EL+ +PG+ K AN++M W +GI VDTHV R+ NRLG
Sbjct: 104 AKVVLTQFGGSVPKTIAELIKIPGVARKSANVIMQELWDVAEGIVVDTHVTRVSNRLGLT 163
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
K + + L LPKE W I+ +V G+ +C +P+C C +++ CP
Sbjct: 164 -------KNQDAVKIEKELMELLPKEYWRNISGAMVLHGRYVCIARKPKCAECVLNKICP 216
Query: 210 SAFK 213
SAFK
Sbjct: 217 SAFK 220
>gi|88602341|ref|YP_502519.1| endonuclease III [Methanospirillum hungatei JF-1]
gi|88187803|gb|ABD40800.1| DNA-(apurinic or apyrimidinic site) lyase [Methanospirillum
hungatei JF-1]
Length = 215
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 8/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ L++ +LS+ T D+ + + L A A+ +A ++ LI+P F+ KA N
Sbjct: 33 YETLIATILSAQTTDRCVNMVTRELFMKYPDVA-ALSEAPVQDVEKLIHPTGFFRTKARN 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ + ++DG +P +D+L+ LPG+G K AN+V+ + GI VDTHV R+ R
Sbjct: 92 IIAASQMVMKEFDGRVPDEMDDLVRLPGVGRKTANIVLDHAFSKTVGIAVDTHVRRVSMR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + S P++ L R PKE W IN L + G+ +CT P C C ++
Sbjct: 152 LGLTDE-------SDPDRIEMDLVRVFPKEFWAEINGLFILHGRRVCTARHPACDNCNLA 204
Query: 206 EYCPSA 211
+ C A
Sbjct: 205 DLCRYA 210
>gi|167758647|ref|ZP_02430774.1| hypothetical protein CLOSCI_00987 [Clostridium scindens ATCC 35704]
gi|167663843|gb|EDS07973.1| endonuclease III [Clostridium scindens ATCC 35704]
Length = 208
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ D + + L + +A A AD ++ I P FY KA N
Sbjct: 30 WQLLIATMLSAQCTDARVNIVTESLFKK-YPSASAFASADLKELEQDIKPTGFYHNKAKN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K + KYDG++P SL+EL +L G+G K AN++ ++ + VDTHV RI NR
Sbjct: 89 IISCMKDIVDKYDGEVPKSLEELTSLAGVGRKTANVIRG-NIYHEPSVVVDTHVKRISNR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG K PE+ + L + LPK+ W+ N ++ FG+TICT PRC C +
Sbjct: 148 LGLT-------KNQDPEKIEQDLMKELPKDHWILYNIQIITFGRTICTARSPRCEECFLQ 200
Query: 206 EYC 208
+YC
Sbjct: 201 KYC 203
>gi|379058515|ref|ZP_09849041.1| DNA-(apurinic or apyrimidinic site) lyase [Serinicoccus profundi
MCCC 1A05965]
Length = 247
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ T D +G L A A+ AD A ++ +I P F+ K
Sbjct: 48 EDAFQLLVATVLSAQTTDVRVNGVTPTLFAR-FPDAHALATADRAEVEAIIQPTGFFRAK 106
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
++ K+ + +++G +P+ L +L+ LPG+G K AN+V+ F+V GI VDTHV R+
Sbjct: 107 TESLLKLGAALVERFEGQVPARLTDLVTLPGVGRKTANVVLG-NAFDVPGITVDTHVGRL 165
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
R GW P A+ P+ EW +++ +L+ G+ C +P CG C
Sbjct: 166 ARRFGWT-------DAEDPVAVEHAVGALFPRREWTQLSHVLIFHGRRTCHARKPACGAC 218
Query: 203 TVSEYCPS 210
V+ CP+
Sbjct: 219 PVARLCPA 226
>gi|383763496|ref|YP_005442478.1| DNA glycosylase/AP lyase [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381383764|dbj|BAM00581.1| DNA glycosylase/AP lyase [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 220
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
A A +AD + ++++I FY KA N+++ + + +YDG++P+ +++LL L G+ K
Sbjct: 72 ARAFAEADLSELEEMIRSTGFYRNKAKNIQQACRRIVEEYDGEVPADMEKLLTLAGVARK 131
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
AN+V+ + + GI VDTHV R+ NRLG S P++ + L P+EEW
Sbjct: 132 TANVVLGVAYGIADGIVVDTHVKRLANRLGLSAH-------SDPDKIEKDLMAITPREEW 184
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
+ + LL+ G+ +C +P CG C + CPSA
Sbjct: 185 IDLAHLLIFHGRRVCDARKPNCGGCVIRHLCPSA 218
>gi|310824392|ref|YP_003956750.1| base excision DNA repair protein [Stigmatella aurantiaca DW4/3-1]
gi|309397464|gb|ADO74923.1| Base excision DNA repair protein, HhH-GPD family [Stigmatella
aurantiaca DW4/3-1]
Length = 226
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T+D+V+ LL+ HT EA+ + I+ LI V F KA
Sbjct: 44 FEQLVACILSIRTRDEVSLPTSLALLRRA-HTPEAMSQLTPEEIEALIAQVTFPEPKARQ 102
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +AK + ++ G +P+ + L + G+GPK A++ + + + + I VD HVHR+ NR
Sbjct: 103 IHALAKRTVEEFGGQLPADAEVLQSFRGVGPKCAHLALGVACGH-EAISVDIHVHRVTNR 161
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T SPEQT +AL+ LP+ W+ IN LLV FG+ +CT RP+C C V
Sbjct: 162 WGYV-------RTRSPEQTLKALEARLPRAYWIEINRLLVPFGKHVCTGSRPQCSRCPVL 214
Query: 206 EYC 208
C
Sbjct: 215 AMC 217
>gi|406983688|gb|EKE04848.1| hypothetical protein ACD_19C00429G0008 [uncultured bacterium]
Length = 218
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 13/168 (7%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ L+S +LS+ TKD++ A +RL + + + ID+ DE I++LIYPV FY KA +
Sbjct: 50 YKTLISTILSARTKDEITLEASKRLFKMAAN-FKKIDQLDELEIRNLIYPVGFYKTKAKH 108
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ KIA+ L +P++ +EL+ LPG+G K AN+V+ F + I VDTHVHRICN
Sbjct: 109 LFKIARSHL----AIVPNTREELMKLPGVGRKTANLVLNRA-FGIPAIAVDTHVHRICNI 163
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
LGWV KT +P++T L + +PK+ W +N L V G+ T
Sbjct: 164 LGWV-------KTKTPKETEIKLIKIIPKKYWSNLNRLFVSIGRQYTT 204
>gi|20092809|ref|NP_618884.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
gi|19918109|gb|AAM07364.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
acetivorans C2A]
Length = 256
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + ++V + ++ TAE AD ++ IY FY
Sbjct: 72 PLELLIATVLSAQSTDVQINRVTENLFKKY-----RTAEDYAGADIRELEIDIYSTGFYK 126
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N+K A++ + ++ G++P ++ EL+ LPG+G K AN+V+ + ++GI VDTHV
Sbjct: 127 NKAKNIKAAAQMIVERFGGEVPKTMKELVTLPGVGRKTANIVLARAFGVIEGIAVDTHVK 186
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG+ + S PE+ + L KE+ I+ L+ G+ +C +PRC
Sbjct: 187 RVSRRLGFT-------RHSDPEKIEQDLITLARKEDLDSISMTLIYHGRKVCRARKPRCY 239
Query: 201 MCTVSEYCPSAF 212
+C V E CPS+
Sbjct: 240 VCVVKELCPSSI 251
>gi|403744726|ref|ZP_10953877.1| endonuclease III [Alicyclobacillus hesperidum URH17-3-68]
gi|403121904|gb|EJY56163.1| endonuclease III [Alicyclobacillus hesperidum URH17-3-68]
Length = 236
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + RL Q A A + + I V + KA N
Sbjct: 43 FELLIATMLSAQCTDARVNMVTARLFQK-YQGPRAFATATPEQMAEDIREVGLFRTKAQN 101
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ A+I L KY G++P + ++L+ LPG+G K AN+V++ F + VDTHV R+ NR
Sbjct: 102 IVATARILLEKYGGEVPKNREQLVELPGVGRKTANVVLS-NAFGIPAFAVDTHVQRVTNR 160
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K+ P +T E R LP+E W + + L + G+ IC +P+C +C VS
Sbjct: 161 IGIV-------KSDDPLKTEEQACRKLPREMWTQAHHLFIHHGRQICVARKPKCDICPVS 213
Query: 206 EYCPSAFKESSTSSSKSKK 224
E C A ++ ++ ++
Sbjct: 214 ELCHYAREQVRLAAGNQRR 232
>gi|363900267|ref|ZP_09326773.1| endonuclease III [Oribacterium sp. ACB1]
gi|395209856|ref|ZP_10398884.1| endonuclease III [Oribacterium sp. ACB8]
gi|361957121|gb|EHL10433.1| endonuclease III [Oribacterium sp. ACB1]
gi|394704841|gb|EJF12373.1| endonuclease III [Oribacterium sp. ACB8]
Length = 231
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 107/202 (52%), Gaps = 9/202 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L + +LS+ D + ++L + + E D +++ I+ FY K
Sbjct: 37 ENAWQLLFATILSAQCTDARVNMVTEKLFKK-YKSLEDFASCDLQELEEDIHSTGFYHNK 95
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+K A + ++ G++P +D L ALPG+G K N+++ F++ I VDTHV RI
Sbjct: 96 AKNIKACAAALVEEHGGEVPKDIDTLTALPGVGRKTGNLILG-NIFDIPSIVVDTHVKRI 154
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRLG +S P +T L LP+E W+R N ++ G+T+CT +P+C +C
Sbjct: 155 SNRLGLA-------DSSDPTKTEFQLMEVLPEEFWIRWNTHIIALGRTLCTSQKPKCELC 207
Query: 203 TVSEYCPSAFKESSTSSSKSKK 224
+++ CPS + T + S++
Sbjct: 208 YLNDLCPSVKGDPETWRAPSER 229
>gi|389852800|ref|YP_006355034.1| endonuclease III [Pyrococcus sp. ST04]
gi|388250106|gb|AFK22959.1| endonuclease III [Pyrococcus sp. ST04]
Length = 216
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 10/186 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLI--YPVAFYTRKA 83
+ L+ ++S +D+V D + L + + E I +A +++ + + + K
Sbjct: 34 YRTLIKCIISQRNRDEVTDRVAEELFKR-YPSMEDIARASIEEMQEFLKNLGIGLWKTKG 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ + +I L KY G +P++L+EL+ LPGIG K AN+V+ G F + I VDTHV+R+
Sbjct: 93 RWIVESTRIILEKYGGVVPNTLEELMKLPGIGRKCANIVLAYG-FGIPAIPVDTHVNRVS 151
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG V ++PE+ E L++ LPK+EW+ +N +V G+ +C P++P+C C
Sbjct: 152 KRLGLVPP------NATPEKVEEILKKLLPKDEWLYVNHAMVDHGKAVCRPIKPKCDECP 205
Query: 204 VSEYCP 209
+ + CP
Sbjct: 206 LRDICP 211
>gi|195953854|ref|YP_002122144.1| endonuclease III [Hydrogenobaculum sp. Y04AAS1]
gi|195933466|gb|ACG58166.1| endonuclease III [Hydrogenobaculum sp. Y04AAS1]
Length = 211
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +L++ KD+ + ++++ + +A+ +A IK+ I ++FY +KA
Sbjct: 31 FELLIETVLAAQEKDEKVN-SIRKSFFSKFKDPKAMKEAPLEEIKEAIKSISFYNKKAIA 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+IA I + KY+ +P DEL+ LPG+G K ANMV+ F I VD HVHRI R
Sbjct: 90 IKEIATILVDKYNSKVPDEEDELVKLPGVGKKTANMVLA-NAFKKPAIAVDRHVHRIVQR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG K P++T E L+ + KE W LL+ + +CT P+C C +
Sbjct: 149 LGL-------DKNKDPDKTTEHLKSIVDKELWTTFYLLLLRHAKEVCTAKNPKCQECVLK 201
Query: 206 EYCPS 210
+ C S
Sbjct: 202 DICES 206
>gi|294781929|ref|ZP_06747261.1| endonuclease III [Fusobacterium sp. 1_1_41FAA]
gi|294481740|gb|EFG29509.1| endonuclease III [Fusobacterium sp. 1_1_41FAA]
Length = 216
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + + ++T E + I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKE-VNTPEQFANMEIEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV RI N
Sbjct: 90 IKKCSQQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRITNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K+ P + + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 IGLV-------KSEDPIKIEQELMKIVPKKSWIVFSHYLILHGRATCIARRPQCKNCEIS 202
Query: 206 EYC 208
EYC
Sbjct: 203 EYC 205
>gi|308178282|ref|YP_003917688.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter
arilaitensis Re117]
gi|307745745|emb|CBT76717.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter
arilaitensis Re117]
Length = 264
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L Y V E D P F +L++ +LS+ T D V A+ L A A+
Sbjct: 22 RELAQAYPYAVPELDFGNP-----FELLVATVLSAQTTD-VRVNAITPALFARFPDALAM 75
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+A+ + +++LI P F+ K ++ ++ + ++DG +P+ L+EL+ LPG+G K AN+
Sbjct: 76 SQAERSELEELIRPTGFFRAKTESLLGLSAALVDRFDGQVPNKLEELVKLPGVGRKTANV 135
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ NR GW + + P + A+ K +W ++
Sbjct: 136 VLG-NAFGVPGITVDTHFGRLANRFGWTDE-------TDPVKVEHAVGELFEKHDWTMLS 187
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
+V G+ +C +P CG C +++ CPS
Sbjct: 188 HRVVFHGRRVCHSRKPACGACEIAKLCPS 216
>gi|289706178|ref|ZP_06502542.1| endonuclease III [Micrococcus luteus SK58]
gi|289557090|gb|EFD50417.1| endonuclease III [Micrococcus luteus SK58]
Length = 268
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L Y V E D P F +L++ +LS+ T D + A L A A+
Sbjct: 26 RILAETYPYAVAELDFETP-----FELLVATVLSAQTTDVRVNAATPALFAR-FPDAHAM 79
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A E +++L+ FY KA + ++++ + ++DG++P+ L++L+ALPG+G K A +
Sbjct: 80 AAATEPELQELVRSTGFYRNKASAILRLSQELVARHDGEVPARLEDLVALPGVGRKTAFV 139
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F GI VDTHV R+ RLG+ + + P + A+ P+ +W ++
Sbjct: 140 VLG-NAFGQPGITVDTHVGRLARRLGFTDE-------TDPVKVEHAVGALFPRRDWTMLS 191
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
L+ G+ +C RP CG C ++ +CPS
Sbjct: 192 HRLIFHGRRVCHARRPACGACPIARWCPS 220
>gi|46200194|ref|YP_005861.1| endonuclease III [Thermus thermophilus HB27]
gi|46197822|gb|AAS82234.1| endonuclease III [Thermus thermophilus HB27]
Length = 220
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ DK + A L A+A+ +A ++ I + Y K
Sbjct: 39 ENPFQLLVATVLSAQATDKSVNEATPALFAR-FPDAKALAEATPEEVEPYIRRIGLYRTK 97
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ +A+ + +Y G++P + L+ LPG+G K A +V+ F V GI VDTHV R+
Sbjct: 98 AKNLVALARRLVEEYGGEVPKEKEALMRLPGVGWKTATVVLGAA-FGVPGIAVDTHVARL 156
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RL + + +PE+ + L+ PKE+WV ++ LV G+ +CT RPRCG C
Sbjct: 157 ARRLCF-------SEAKAPERIGKDLEALFPKEDWVFVHHALVLHGRYVCTARRPRCGAC 209
Query: 203 TVSEYCPS 210
++ YCPS
Sbjct: 210 VLAPYCPS 217
>gi|257125212|ref|YP_003163326.1| endonuclease III [Leptotrichia buccalis C-1013-b]
gi|257049151|gb|ACV38335.1| endonuclease III [Leptotrichia buccalis C-1013-b]
Length = 219
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 105/196 (53%), Gaps = 10/196 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ ++++ +LS+ D + + L + A+ I K ++ T++ I FY KA N
Sbjct: 31 YQLMVAVILSAQCTDARVNIVTKELFKVVKEPAD-IRKMNQETLEKYIKSTGFYKNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K A++ L KY IP L+EL+ LPG+G K AN+V+ W +GI VDTHV R+ NR
Sbjct: 90 IKLNAEMMLDKYKDIIPKKLEELIELPGVGRKTANVVLGELWNIREGIVVDTHVKRLSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V K +PE L +++PK+ W + L+ G+ C +P+C +C +
Sbjct: 150 IGFV-------KNDNPEIIERELMKFIPKKYWFVYSHYLILHGRDKCIARKPKCEICEIR 202
Query: 206 EYCPSAFKESSTSSSK 221
+YC + E + SK
Sbjct: 203 DYC--KYNEENLKKSK 216
>gi|193212151|ref|YP_001998104.1| endonuclease III [Chlorobaculum parvum NCIB 8327]
gi|193085628|gb|ACF10904.1| endonuclease III [Chlorobaculum parvum NCIB 8327]
Length = 214
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 103/186 (55%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ ++++ DK + L + AEA+ + D IK +I P+ +Y K
Sbjct: 30 ETPFQLLVATIMAAQATDKKVNQLTVELFK-AAPDAEAMSRMDVDDIKTIIRPINYYNNK 88
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ +++ + ++ GD+P+S + L +LPG+G K AN+V++ F V + VDTHVHR+
Sbjct: 89 AKNILAMSQRLVDEFGGDVPASREALESLPGVGRKTANVVLS-NAFGVPTMPVDTHVHRV 147
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NR+G KTS PEQT EAL + +P+ + + LV G+ C +P C C
Sbjct: 148 SNRIGLC-------KTSKPEQTEEALLKIIPESRMIDFHHYLVLHGRYTCKAKKPECSKC 200
Query: 203 TVSEYC 208
+ E C
Sbjct: 201 PIIEAC 206
>gi|223477172|ref|YP_002581604.1| Endonuclease III [Thermococcus sp. AM4]
gi|214032398|gb|EEB73228.1| Endonuclease III [Thermococcus sp. AM4]
Length = 239
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 10/188 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP--VAFYTRKA 83
+ L+ ++S +D+V + L + E I +++ + V + K
Sbjct: 41 YRTLVHCIISQRMRDEVTYRVWEELFEK-YRDIETIANTPVDEMREFLRKRGVGLWKTKG 99
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ K ++I L KY+G +P ++EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 100 EWIVKASRIILEKYNGKVPDDINELMKLPGIGRKCANIVLAYG-FGKQAIPVDTHVNRIS 158
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P PE+ E L+ +PKE+W+ +N +V G++IC P+RP+C C
Sbjct: 159 KRLG-LAPPRV-----PPEKVEEYLRELIPKEKWIYVNHAMVDHGRSICKPIRPKCESCP 212
Query: 204 VSEYCPSA 211
+ E CP A
Sbjct: 213 LKELCPYA 220
>gi|115374385|ref|ZP_01461668.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
gi|115368587|gb|EAU67539.1| endonuclease III (DNA-(apurinic or apyrimidinic site)lyase)
[Stigmatella aurantiaca DW4/3-1]
Length = 195
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T+D+V+ LL+ HT EA+ + I+ LI V F KA
Sbjct: 13 FEQLVACILSIRTRDEVSLPTSLALLRRA-HTPEAMSQLTPEEIEALIAQVTFPEPKARQ 71
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +AK + ++ G +P+ + L + G+GPK A++ + + + + I VD HVHR+ NR
Sbjct: 72 IHALAKRTVEEFGGQLPADAEVLQSFRGVGPKCAHLALGVACGH-EAISVDIHVHRVTNR 130
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V +T SPEQT +AL+ LP+ W+ IN LLV FG+ +CT RP+C C V
Sbjct: 131 WGYV-------RTRSPEQTLKALEARLPRAYWIEINRLLVPFGKHVCTGSRPQCSRCPVL 183
Query: 206 EYC 208
C
Sbjct: 184 AMC 186
>gi|84495136|ref|ZP_00994255.1| putative endonuclease III [Janibacter sp. HTCC2649]
gi|84384629|gb|EAQ00509.1| putative endonuclease III [Janibacter sp. HTCC2649]
Length = 263
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+LL+ +LS+ T D + L + TAEA+ AD ++ ++ P F+ K ++
Sbjct: 48 LLLATVLSAQTTDVTVNKVTPELFRR-WPTAEALAAADREEMEAVLKPTGFFRAKTNSVI 106
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ + + ++ G++P L +L+ LPG+G K AN+V+ F V GI VDTH R+ R G
Sbjct: 107 TLGQALVDRFGGEVPPRLKDLVTLPGVGRKTANVVLG-NAFEVPGITVDTHFGRLVRRFG 165
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + A+ P+++WV ++ +L+ G+ C RP CG C VS++
Sbjct: 166 WTEE-------TDPVKVEHAIGALFPRKDWVMLSHVLIFHGRRTCHARRPACGACPVSQW 218
Query: 208 CPSAFKESSTSSSKSKK 224
CPS + E T + + K
Sbjct: 219 CPS-YGEGETDPATALK 234
>gi|323452320|gb|EGB08194.1| hypothetical protein AURANDRAFT_14127, partial [Aureococcus
anophagefferens]
Length = 213
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 13/198 (6%)
Query: 16 DSSLPPKERRFAVLLSALLSSLTKDKVADGALQRL-LQNGLHTAEAIDKADEATIKDLI- 73
D S PP RF L++ +LS+ T D+ ++ L +G TA+ + AD +T++ +
Sbjct: 25 DRSAPPHVFRFQTLVALILSARTTDEATMSCVRDLQWADGGLTADTLAAADASTLERALA 84
Query: 74 -YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF-NVQ 131
+ VAF KA +++ A++C Y GD+P L + ALPG+G K+A ++ W +
Sbjct: 85 NHEVAFPRNKARYLRRAAELCRDSYGGDVPRDLPSIRALPGVGDKVAALLTQAAWGDDAG 144
Query: 132 GICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTI 191
G+ VDTH HRI NRLGWV T++ T+ ++ +LP++ WV NPLLVGFGQ +
Sbjct: 145 GVAVDTHFHRIANRLGWVA-------TATAAATKRDVEAFLPRDRWVAANPLLVGFGQEV 197
Query: 192 CTPLRPRCGMCTVSEYCP 209
C P C C V+ CP
Sbjct: 198 CG-YAPNCESCPVAA-CP 213
>gi|452209474|ref|YP_007489588.1| Endonuclease III [Methanosarcina mazei Tuc01]
gi|452099376|gb|AGF96316.1| Endonuclease III [Methanosarcina mazei Tuc01]
Length = 234
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + +KV + ++ TA AD ++ IY FY
Sbjct: 50 PLELLVATVLSAQSTDVQINKVTENLFKKY-----RTAWDYASADIRELEADIYSTGFYK 104
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N+K A++ + Y G++P +++EL+ LPG+G K AN+V+ + ++GI VDTHV
Sbjct: 105 SKAKNIKAAAQLIIENYGGEVPQTMEELVTLPGVGRKTANIVLARAFGIIEGIAVDTHVK 164
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG + S P + + L KE+ I+ L+ G+ +C +PRC
Sbjct: 165 RVSGRLGLT-------RNSDPVKIEQDLMSLARKEDLDSISMTLIHHGRKVCQARKPRCS 217
Query: 201 MCTVSEYCPSAF 212
+C V E CPS+
Sbjct: 218 ICVVKELCPSSI 229
>gi|384430471|ref|YP_005639831.1| endonuclease III [Thermus thermophilus SG0.5JP17-16]
gi|386361223|ref|YP_006059468.1| endonuclease III [Thermus thermophilus JL-18]
gi|333965939|gb|AEG32704.1| endonuclease III [Thermus thermophilus SG0.5JP17-16]
gi|383510250|gb|AFH39682.1| endonuclease III [Thermus thermophilus JL-18]
Length = 220
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ DK + A L A+A+ A ++ I + Y K
Sbjct: 39 ENPFQLLVATVLSAQATDKSVNEATPALFAR-FPDAKALASATPEEVEPYIRRIGLYRTK 97
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ +A+ + +Y G++P + L+ LPG+G K A +V+ F V GI VDTHV R+
Sbjct: 98 AKNLVALARRLVEEYGGEVPKEKEALMRLPGVGWKTATVVLGAA-FGVPGIAVDTHVARL 156
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RL + + +PE+ + L+ PKE+WV ++ LV G+ +CT RPRCG C
Sbjct: 157 ARRLCF-------SEAKAPERIGKDLEALFPKEDWVFVHHALVLHGRYVCTARRPRCGAC 209
Query: 203 TVSEYCPS 210
++ YCPS
Sbjct: 210 VLAPYCPS 217
>gi|166157039|emb|CAO79496.1| Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)
[uncultured candidate division WWE3 bacterium
EJ0ADIGA11YD11]
Length = 217
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 101/191 (52%), Gaps = 8/191 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + + ++ +LS+ T DK + +L + + E++ AD ++ LI V FY K
Sbjct: 33 ENEYQLAVAVMLSAQTTDKKVNQVTPQLFKK-YPSWESLASADLLDVQSLIKEVNFYKGK 91
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A + + ++ + G +P ++++L+ +PG+ K AN++M W GI VDTHV R+
Sbjct: 92 AERLIQAGRVVTLNFGGVLPRNMEDLMKIPGVARKSANVIMQELWGIADGIVVDTHVKRV 151
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRLG K PE+ + L + +PK W + +V G+ ICT P+C C
Sbjct: 152 SNRLGLT-------KEQDPEKIEKDLMKIIPKRSWRNFSGAMVLHGRYICTAKSPKCEEC 204
Query: 203 TVSEYCPSAFK 213
++E CPSAFK
Sbjct: 205 PLNEICPSAFK 215
>gi|403737479|ref|ZP_10950275.1| endonuclease III [Austwickia chelonae NBRC 105200]
gi|403192427|dbj|GAB77045.1| endonuclease III [Austwickia chelonae NBRC 105200]
Length = 248
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D V ++ L A A+ AD ++++I P+ F+ KA
Sbjct: 47 FQLLVATVLSAQTTD-VRVNSVTPTLFAAYPDATALAAADRTELEEIIRPIGFHRNKADA 105
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K++ L ++DG +P L EL+AL G+G K AN+V+ F V GI VDTHV R+ R
Sbjct: 106 LLKLSAELLARHDGRVPGRLKELVALSGVGRKTANVVLG-NAFGVPGITVDTHVGRLARR 164
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW T P + P++EW ++ L+ G+ C RP CG CTV+
Sbjct: 165 FGWTT-------AEDPVVVETEVGALFPRKEWTMLSHTLIFHGRRTCHARRPACGACTVA 217
Query: 206 EYCPS 210
CPS
Sbjct: 218 SLCPS 222
>gi|392894670|ref|NP_001254909.1| Protein NTH-1, isoform c [Caenorhabditis elegans]
gi|293324784|emb|CBK55600.1| Protein NTH-1, isoform c [Caenorhabditis elegans]
Length = 140
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 73/112 (65%), Gaps = 11/112 (9%)
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
MAN+VM + W GI VDTHVHRI NRLGW+ KTS+PE+T++AL+ LPK EW
Sbjct: 1 MANLVMQIAWGECVGIAVDTHVHRISNRLGWI-------KTSTPEKTQKALEILLPKSEW 53
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSS 229
IN LLVGFGQ C P+RP+CG C CPS S+ + KS+ E+S+
Sbjct: 54 QPINHLLVGFGQMQCQPVRPKCGTCLCRFTCPS----STAKNVKSETEETST 101
>gi|350539139|ref|NP_001232362.1| endonuclease III-like protein 1 [Taeniopygia guttata]
gi|197127336|gb|ACH43834.1| putative Endonuclease III-like protein 1 [Taeniopygia guttata]
Length = 235
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 86/131 (65%), Gaps = 2/131 (1%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV +GV DSS PP+ R+ VLL+ +LSS TKD+V A+ RL + GL + +++ +
Sbjct: 79 PVDEMGVQTCYDSSAPPEVMRYQVLLALMLSSQTKDQVTSAAMLRLRRRGL-SVDSVLQM 137
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
D+ T+ +IYPV F+ K +K+ I KY GDIPS+++EL+ LPG+GPKMA++ M
Sbjct: 138 DDETLGQIIYPVGFWRNKVKYIKQTTAILKQKYGGDIPSTVEELVQLPGVGPKMAHLAMH 197
Query: 125 LGWFNVQGICV 135
+ W +V GI V
Sbjct: 198 IAWDSVAGIGV 208
>gi|145524629|ref|XP_001448142.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415675|emb|CAK80745.1| unnamed protein product [Paramecium tetraurelia]
Length = 278
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 15/197 (7%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
+RF +L S +LS TKD V RLL+ +T I DE + LIY V F KA
Sbjct: 97 QRFQILTSLMLSPQTKDDVTSKCANRLLE---YTINDIANMDEPDLIKLIYEVNFNVTKA 153
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+K +A++ + Y G +P + +E + + G+G K+A + + + + V+GI +D ++ RIC
Sbjct: 154 KRIKDLAQLAI--YKG-MPKTFEETIKIKGVGEKIALLYIQVAFQRVEGIPIDVNMIRIC 210
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
NR+ P K+K SP + R+ L+ +EW IN LVGFGQ IC P +P+C C
Sbjct: 211 NRV-----PIFKEK--SPTKLRKFLESQFEHKEWGEINETLVGFGQQICLP-KPKCDQCK 262
Query: 204 VSEYCPSAFKESSTSSS 220
+ + C +K +TS
Sbjct: 263 LKDIC-EYYKLQNTSDQ 278
>gi|115378817|ref|ZP_01465958.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|310822146|ref|YP_003954504.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|115364173|gb|EAU63267.1| endonuclease III [Stigmatella aurantiaca DW4/3-1]
gi|309395218|gb|ADO72677.1| Endonuclease III [Stigmatella aurantiaca DW4/3-1]
Length = 213
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ LL++ D+ + L Q +A +AD +++ + P FY +KA
Sbjct: 31 FELLVATLLAAQCTDERVNRVTATLFQK-YQGPQAFAQADTGALEEDLRPTGFYKQKAKA 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++ L ++ G++P SL++L+ LPG+ K AN+V+ + G+ VDTHV R+ R
Sbjct: 90 VQTMSRELLARFGGEVPQSLEQLVTLPGVARKTANVVLNTAFQLPSGVIVDTHVARVSQR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG T++K PE + L R +P+++W P +V G+ CT +P+CG C +
Sbjct: 150 LGL-----TQKK--KPEDIEQELMRLVPQDQWTFFGPAMVLHGRYTCTARKPQCGACPMV 202
Query: 206 EYCP 209
+CP
Sbjct: 203 AFCP 206
>gi|226355002|ref|YP_002784742.1| endonuclease III [Deinococcus deserti VCD115]
gi|226316992|gb|ACO44988.1| putative endonuclease III [Deinococcus deserti VCD115]
Length = 222
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 14/209 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+ LE +Y E + P F +L++ +LS+ D + A L A A
Sbjct: 22 LSALEVLYPDARTELEFRTP-----FELLVATVLSAQATDVSVNAATPALFA-AYPDAHA 75
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ +A+ I+ LI + Y KA N+ +A++ + ++DG++P+ D ++ALPG G K AN
Sbjct: 76 MSRAEPEDIEPLIRRIGLYRAKARNLAALARLLVERHDGEVPNDFDAVVALPGAGRKTAN 135
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V++ + I VDTHV R+ R+G TQ ++P++ LQR P+E WV +
Sbjct: 136 VVLS-NAYGYPAIAVDTHVGRLARRIGLSTQ-------TNPDKVEVDLQRLFPRERWVFL 187
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ L+ G+ +C RP C C ++ +CP
Sbjct: 188 HHGLILHGRRVCIARRPLCENCLMASFCP 216
>gi|221195209|ref|ZP_03568265.1| endonuclease III [Atopobium rimae ATCC 49626]
gi|221185112|gb|EEE17503.1| endonuclease III [Atopobium rimae ATCC 49626]
Length = 231
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 105/202 (51%), Gaps = 14/202 (6%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ T D + L + EA+ A + + + I + F+ KA +
Sbjct: 37 YTLLVAVMLSAQTTDAAVNKVTPELFRR-WPNPEAMASAQPSEVGECIRTIGFWRAKAAH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++A+I + Y G++P +++EL+ LPG+G K AN+V+ + V GI VDTHV+RI +R
Sbjct: 96 CTEMAQILMADYGGEVPQTMEELVKLPGVGRKTANIVLNKMFNTVDGIAVDTHVYRIASR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L + ++P + L LP E W +N + FG+ ICT P C C +S
Sbjct: 156 LRLTS-------AATPLAAEQDLLSLLPHELWKDVNEEWIHFGRDICTARNPTCSACPLS 208
Query: 206 EYCPSA------FKESSTSSSK 221
+ CPS FK S SSK
Sbjct: 209 DICPSCGQPNRWFKGSGKKSSK 230
>gi|229816038|ref|ZP_04446359.1| hypothetical protein COLINT_03091 [Collinsella intestinalis DSM
13280]
gi|229808352|gb|EEP44133.1| hypothetical protein COLINT_03091 [Collinsella intestinalis DSM
13280]
Length = 220
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 5/189 (2%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F ++++ LLS+ T D + L + T E + A + D+I + FY K
Sbjct: 34 ETPFRLVIAVLLSAQTTDAQVNKVTPELFRR-WPTPEQMAGATYEELSDVIKSLGFYKTK 92
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A + A++ + Y G +P+ + EL+ LPG+G K AN+V+ +G+ V GI VDTHV+RI
Sbjct: 93 AKHCIACAQMIVADYGGVVPNEMKELVKLPGVGRKTANIVLNVGYGIVDGIAVDTHVNRI 152
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
+RL P T +K P +T + L + LP+E W +N + G+ IC +P CG C
Sbjct: 153 AHRLK--LSPKTHEK--EPLKTEQDLLKILPREYWNDVNHQWIMLGREICDARKPLCGEC 208
Query: 203 TVSEYCPSA 211
+++ CPSA
Sbjct: 209 PLADICPSA 217
>gi|325001416|ref|ZP_08122528.1| putative endonuclease III [Pseudonocardia sp. P1]
Length = 266
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
++ L Y E D S P + A +LSA + ++V R TA
Sbjct: 37 LRALAEAYPHAHCELDFSTP-LDLAVATILSAQCTDERVNQVTPALFARYP-----TAAG 90
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
AD +++LI P FY KA ++ + + K+ G++P++LDEL+ALPGIG K AN
Sbjct: 91 YAGADRTELEELIRPTGFYRNKANSLTGLGAAVVEKHGGELPATLDELVALPGIGRKTAN 150
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+++ F+V GI VDTH R+ R GW T+ P + A+ +P+ +W +
Sbjct: 151 VILG-NAFDVPGITVDTHFGRLVRRWGWTTE-------EDPVKVEHAVGELVPRRDWTIV 202
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
+ ++ G+ +C +P CG CT++ CPS
Sbjct: 203 SHHVIFHGRRVCHSRKPACGACTLAPDCPS 232
>gi|210631996|ref|ZP_03297161.1| hypothetical protein COLSTE_01054 [Collinsella stercoris DSM 13279]
gi|210159798|gb|EEA90769.1| endonuclease III [Collinsella stercoris DSM 13279]
Length = 220
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 5/189 (2%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F ++++ LLS+ T D + L + T EA+ A + +I + FY K
Sbjct: 34 ETPFRLVIAVLLSAQTTDAQVNKVTPELFRR-WPTPEAMAGATYEELSGVIKSLGFYKTK 92
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A + + A++ + Y G +P+ + EL+ LPG+G K AN+V+ +G+ V GI VDTHV+RI
Sbjct: 93 AKHCIECAQMIVADYGGVVPADMKELVKLPGVGRKTANIVLNVGYGIVDGIAVDTHVNRI 152
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
+RL P T +K P +T + L + LP+E W +N + G+ IC +P CG C
Sbjct: 153 AHRLK--LSPKTHEK--EPLKTEQDLLKILPREYWNDVNHQWIMLGREICDARKPLCGEC 208
Query: 203 TVSEYCPSA 211
+++ CPSA
Sbjct: 209 PLADICPSA 217
>gi|257066254|ref|YP_003152510.1| endonuclease III [Anaerococcus prevotii DSM 20548]
gi|256798134|gb|ACV28789.1| endonuclease III [Anaerococcus prevotii DSM 20548]
Length = 197
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + D V + ++ ++TAE KAD TI++ I V Y KA N
Sbjct: 16 FELLIATILSAQSTD-VRVNKVTSVMFKDMNTAEEFAKADIKTIENYIRTVGIYKNKAKN 74
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +KI + Y+G++P+ + EL+ LPG+G K AN+V + FN+ I VDTHV R+ NR
Sbjct: 75 ISATSKILCSDYNGEVPADIKELMKLPGVGRKTANVVAS-NAFNIPAIAVDTHVFRVSNR 133
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG E+T + L +PKE W + + L+ G+ +C P C C ++
Sbjct: 134 LGLADAKNV-------EKTEKQLMENIPKERWRKTHHQLITHGRALCKARGPICEECDLN 186
Query: 206 EYC 208
C
Sbjct: 187 VVC 189
>gi|320335030|ref|YP_004171741.1| endonuclease III [Deinococcus maricopensis DSM 21211]
gi|319756319|gb|ADV68076.1| endonuclease III [Deinococcus maricopensis DSM 21211]
Length = 224
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 9/192 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + A L A A+ A ++ I + Y KA N
Sbjct: 42 FELLVATVLSAQATDKSVNAATPALFA-AYPDAFALAAARVEDVEGFIRTIGLYRNKARN 100
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + + ++ GD+P+ D ++ALPG G K AN+V++ F I VDTHV R+ R
Sbjct: 101 LVALAGLLVERHGGDVPNDFDAVVALPGAGRKTANVVLS-NAFGFPAIAVDTHVGRLARR 159
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ + ++P++ LQR P+E+WV ++ L+ G+ +C RP C C ++
Sbjct: 160 LGFTAE-------TNPDKVEVQLQRLFPREQWVFLHHALILHGRRVCLARRPVCSACALA 212
Query: 206 EYCPSAFKESST 217
CP E ST
Sbjct: 213 AVCPQVGVEVST 224
>gi|108759213|ref|YP_634549.1| base excision DNA repair protein [Myxococcus xanthus DK 1622]
gi|108463093|gb|ABF88278.1| base excision DNA repair protein, HhH-GPD family [Myxococcus
xanthus DK 1622]
Length = 240
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T+D+V+ LLQ T EA+ + I LI PV F+ KA
Sbjct: 58 FEQLVACILSIRTRDEVSLPVSLALLQRA-STPEALARMSPEDIDALIQPVTFHEAKAWQ 116
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA ++ G +P L + G+GPK A++ + + + + I VD HVHR+ NR
Sbjct: 117 LHAIATRTRDEFGGALPCDAQVLQSFKGVGPKCAHLALGIACGH-EAISVDIHVHRVTNR 175
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V + +PE T EAL+ LP+ WV +N LLV FG+ +CT RP+C C V
Sbjct: 176 WGYV-------QARTPEATMEALEAVLPRAWWVELNRLLVPFGKHVCTGTRPKCSTCPVL 228
Query: 206 EYC 208
+C
Sbjct: 229 SFC 231
>gi|304439856|ref|ZP_07399750.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371595|gb|EFM25207.1| endonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 210
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 103/183 (56%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + + L + +T + ++ +I+ L+ FY KA +
Sbjct: 33 FELLVATILSAQCTDVRVNMVTKELFKK-YNTPQQFEELGATSIEPLVKTCGFYRNKARS 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +K+ + +Y G++P++++EL+ LPG+G K AN+V + F + I VDTHV R+ NR
Sbjct: 92 IYGASKMIIDEYGGEVPNTIEELVKLPGVGKKTANVVAS-NCFGIPAIAVDTHVFRVTNR 150
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + +PE+T EAL + + K W + + L++ G+ C P CG+C V
Sbjct: 151 IGIVNE-------KTPEKTEEALMKRIDKNMWTKAHHLIIFHGRRRCMARNPDCGLCEVR 203
Query: 206 EYC 208
EYC
Sbjct: 204 EYC 206
>gi|433637776|ref|YP_007283536.1| endonuclease III [Halovivax ruber XH-70]
gi|433289580|gb|AGB15403.1| endonuclease III [Halovivax ruber XH-70]
Length = 227
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 110/210 (52%), Gaps = 9/210 (4%)
Query: 2 KTLEPVYSLGVDETDSSLPPK-ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+T+E + L + DS++ + R +L++ +LS+ D+ + + L + + E
Sbjct: 11 QTVEVIDRLEAEYPDSTISLRYSNRLELLIAVILSAQCTDERVNAETEHLFET-YQSPED 69
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
A + + + + + FY KA +++ ++ + ++DG++P ++DEL LPG+G K AN
Sbjct: 70 YANAPQEELAEALNSINFYNNKAGYIREACELIVEEHDGEVPDTMDELTELPGVGRKTAN 129
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ G V+GI VDTHV R+ RLG + PE + L +P+ WV+
Sbjct: 130 VVLQHGHDVVEGIVVDTHVQRLTRRLGITEE-------ERPEAIEQDLLDIVPEGYWVQF 182
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
LL+ G+ CT P C C +++ CPS
Sbjct: 183 THLLIDHGRATCTARNPDCESCVLADICPS 212
>gi|256846729|ref|ZP_05552185.1| endonuclease III [Fusobacterium sp. 3_1_36A2]
gi|256717949|gb|EEU31506.1| endonuclease III [Fusobacterium sp. 3_1_36A2]
Length = 216
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E D I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMDLEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEIPKDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 MGLVD-------SEDPIKIELELMKIVPKKSWIDFSHYLILHGRATCIARRPKCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 203 KYCNYGVKKLSNEN 216
>gi|268317002|ref|YP_003290721.1| endonuclease III [Rhodothermus marinus DSM 4252]
gi|262334536|gb|ACY48333.1| endonuclease III [Rhodothermus marinus DSM 4252]
Length = 217
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +LS+ T DK + L + TAEA+ +A+ ++ L+ P+ +Y +KA
Sbjct: 34 FELLIVTVLSAQTTDKKVNEVSPELFRR-YPTAEALAQANPEELEPLLRPLGYYRQKART 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A+ + ++ G++P S++ L ALPG+G K A +V+ + +GI VDTHV R+ R
Sbjct: 93 IVNLARQLVERHGGEVPRSMEALTALPGVGRKTAAIVLGTAFGIREGIAVDTHVSRVAQR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG T KT P++ + L +P+E+W LV G+ +C RPRC C ++
Sbjct: 153 LGL-----TSHKT--PDKIEQDLMALVPREDWTWFGHALVLHGRYVCLARRPRCSQCVLA 205
Query: 206 EYCP 209
+ CP
Sbjct: 206 DLCP 209
>gi|237740957|ref|ZP_04571438.1| endonuclease III [Fusobacterium sp. 4_1_13]
gi|229431001|gb|EEO41213.1| endonuclease III [Fusobacterium sp. 4_1_13]
Length = 216
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E D I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMDLEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEIPKDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 IGLVD-------SEDPIKIELELMKIVPKKSWIDFSHYLILHGRATCIARRPKCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 203 KYCNYGVKKLSNEN 216
>gi|433456810|ref|ZP_20414838.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter
crystallopoietes BAB-32]
gi|432195671|gb|ELK52182.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter
crystallopoietes BAB-32]
Length = 274
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 114/223 (51%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
K L Y V E D F +L++ +LS+ T D + L A+A+
Sbjct: 32 KILAEQYPYAVAELDF-----RNAFELLVATVLSAQTTDVRVNATTPALFAR-YPDAKAM 85
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+ADEA ++++I P F+ KA ++ ++ + +YDG++P+ L++L+ L G+G K AN+
Sbjct: 86 SEADEADLQEMIRPTGFFRAKAQSLLALSHRIVDEYDGEVPNKLEDLVTLAGVGRKTANV 145
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ R GW T + + + + PK +W ++
Sbjct: 146 VLG-NAFGVPGITVDTHFGRLARRFGWTNS------TDAVKVESDVAALFEPK-DWTMLS 197
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+V G+ +C +P CG C V++ CPS F E T SK+ K
Sbjct: 198 HRVVFHGRRVCHAKKPACGACPVADLCPS-FGEGETDPSKAAK 239
>gi|21226997|ref|NP_632919.1| endonuclease III [Methanosarcina mazei Go1]
gi|20905314|gb|AAM30591.1| Endonuclease III [Methanosarcina mazei Go1]
Length = 234
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 100/192 (52%), Gaps = 12/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + +KV + ++ TA AD ++ IY FY
Sbjct: 50 PLELLVATVLSAQSTDVQINKVTENLFKKY-----RTAWDYASADIRELEADIYSTGFYK 104
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N+K A++ + Y G++P +++EL+ LPG+G K AN+V+ + ++GI VDTHV
Sbjct: 105 SKAKNIKAAAQLIIENYGGEVPQTMEELVTLPGVGRKTANIVLARAFGIIEGIAVDTHVK 164
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG + S P + + L KE+ I+ L+ G+ +C +PRC
Sbjct: 165 RVSGRLGLT-------RNSDPVKIEQDLISLARKEDLDSISMTLIYHGRKVCQARKPRCS 217
Query: 201 MCTVSEYCPSAF 212
+C V E CPS+
Sbjct: 218 ICVVKELCPSSI 229
>gi|428769953|ref|YP_007161743.1| DNA-(apurinic or apyrimidinic site) lyase [Cyanobacterium aponinum
PCC 10605]
gi|428684232|gb|AFZ53699.1| endonuclease III [Cyanobacterium aponinum PCC 10605]
Length = 212
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + A +LSA + +KV +R A++ +AD I++LI FY
Sbjct: 32 PLQLLVATILSAQCTDERVNKVTPALFKRFPD-----AQSFAQADREEIENLIRSTGFYR 86
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++ + +DG +P ++ ELL L G+ K AN+V+ + ++G+ VDTHV
Sbjct: 87 NKAKNIQNACIRIVNDFDGKVPQTMTELLTLAGVARKTANVVLAHAFGIIEGVTVDTHVK 146
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ NRLG K S+P Q + L + LP+ EW + ++ G+ +C +PRC
Sbjct: 147 RLSNRLGLT-------KHSNPIQIEKDLMKLLPQAEWENFSISIIYHGRAVCNARKPRCP 199
Query: 201 MCTVSEYCPS 210
CT+S CPS
Sbjct: 200 ECTLSHLCPS 209
>gi|390559245|ref|ZP_10243597.1| DNA-(Apurinic or apyrimidinic site) lyase [Nitrolancetus
hollandicus Lb]
gi|390174172|emb|CCF82890.1| DNA-(Apurinic or apyrimidinic site) lyase [Nitrolancetus
hollandicus Lb]
Length = 220
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 94/183 (51%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ ++S T D+V +R T + + I LI P FY KA
Sbjct: 38 FEQLVACMISIRTLDEVTLPTARRFFARA-RTPHDVSRIPAEEIAALIRPSTFYETKARQ 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +IA + ++G IP + D L + PG+GPK N+V+ + + I VD HVHR+ NR
Sbjct: 97 ILEIAHRAVADFNGCIPCADDVLRSFPGVGPKCTNLVLAIAC-DQPRISVDVHVHRVTNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T +PEQT AL+ LP WV IN LLV FG+ +CT PRC C V
Sbjct: 156 WGYV-------HTRTPEQTMAALEAKLPPRFWVDINRLLVPFGKHVCTARLPRCSTCPVL 208
Query: 206 EYC 208
+ C
Sbjct: 209 DMC 211
>gi|223940410|ref|ZP_03632263.1| DNA-(apurinic or apyrimidinic site) lyase [bacterium Ellin514]
gi|223890905|gb|EEF57413.1| DNA-(apurinic or apyrimidinic site) lyase [bacterium Ellin514]
Length = 242
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 11/184 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ ++S T D+V ++L T + + I +LI F+ KA
Sbjct: 60 FEQLVACIISIRTLDEVTIPTARKLFAVA-RTPGQVSRLQVKKIDELISACTFHEAKART 118
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG-ICVDTHVHRICN 144
++ IA + ++ G +P ++L+ L G+GPK AN+V LG QG I VD HVHR+ N
Sbjct: 119 IRTIASEAVQRFGGALPCDGEKLMELHGVGPKCANLV--LGIACGQGKISVDIHVHRVTN 176
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
R G+V +T +PEQT AL+ LPK+ W+ IN LLV FG+ ICT P+C C V
Sbjct: 177 RWGYV-------QTRTPEQTMAALEAKLPKQYWIEINSLLVPFGKHICTGRTPKCSTCPV 229
Query: 205 SEYC 208
E C
Sbjct: 230 LEMC 233
>gi|422939814|ref|ZP_16967185.1| endonuclease III [Fusobacterium nucleatum subsp. animalis ATCC
51191]
gi|339890838|gb|EGQ79906.1| endonuclease III [Fusobacterium nucleatum subsp. animalis ATCC
51191]
Length = 203
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E I++ I F+ KA N
Sbjct: 18 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMKLEEIENYIKSTGFFRNKAKN 76
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G++P +D+L L G+G K AN+V W GI VDTHV RI N
Sbjct: 77 IKKCSEQLLEKYNGEVPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRISNL 136
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 137 IGLVD-------SEDPIKIELELMKIVPKKSWINFSHYLILHGRATCIARRPRCSECEIS 189
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 190 KYCNYGIKKLSNEN 203
>gi|344211668|ref|YP_004795988.1| endonuclease III [Haloarcula hispanica ATCC 33960]
gi|343783023|gb|AEM57000.1| endonuclease III [Haloarcula hispanica ATCC 33960]
Length = 227
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 8/194 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + L + +AE +A E + + IY + F+ K
Sbjct: 35 RLELLIAVVLSAQCTDERVNEVTADLFEK-YQSAEDYAEATEEQLAEDIYGITFHNNKGG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
++ I +I ++DG++P ++ L LPG+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YLQGIGEILAEEHDGEVPDTMSALTDLPGVGRKTANVVLQHGHDIVEGIVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE + L +P +EW + LL+ G+ +C CG C +
Sbjct: 154 RLGLTEE-------ERPEAIEQDLLDVVPSDEWQQFTHLLIDHGRAVCGARSAECGACVL 206
Query: 205 SEYCPSAFKESSTS 218
++ CPS +S
Sbjct: 207 ADICPSEKGDSDVD 220
>gi|239918301|ref|YP_002957859.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Micrococcus luteus NCTC 2665]
gi|281415503|ref|ZP_06247245.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Micrococcus luteus NCTC 2665]
gi|239839508|gb|ACS31305.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Micrococcus luteus NCTC 2665]
Length = 268
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L Y V E D P F +L++ +LS+ T D + A L A A+
Sbjct: 26 RILAETYPYAVAELDFETP-----FELLVATVLSAQTTDVRVNAATPALFAR-FPDAHAM 79
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A E +++L+ FY KA + ++++ + ++DG++P+ L++L+ALPG+G K A +
Sbjct: 80 AAATEPELQELVRSTGFYRNKASAILRLSQELVGRHDGEVPARLEDLVALPGVGRKTAFV 139
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F GI VDTH R+ RLG+ + + P + A+ P+ +W ++
Sbjct: 140 VLG-NAFGQPGITVDTHFGRLARRLGFTDE-------TDPVKVEHAVGALFPRRDWTMLS 191
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
L+ G+ +C RP CG C ++ +CPS
Sbjct: 192 HRLIFHGRRVCHARRPACGACPIARWCPS 220
>gi|257791041|ref|YP_003181647.1| endonuclease III [Eggerthella lenta DSM 2243]
gi|257474938|gb|ACV55258.1| endonuclease III [Eggerthella lenta DSM 2243]
Length = 220
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F + ++ LLS+ T DK + L + T + AD ++ +I + F+ KA N
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPALWER-YPTPADLAAADVRDVEGIIRTIGFFHTKAAN 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K A++ + Y G+IP +DEL LPG+G K AN+V+ + V+GI VDTHV RI +R
Sbjct: 97 VIKCAQMVVADYGGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHR 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L + +P +T AL + P+E W IN V FG+ C P+C C +
Sbjct: 157 LKF-----AGPSADTPAKTEAALLKLYPREYWGPINHQWVLFGRETCIARNPKCATCFLC 211
Query: 206 EYCPSAFK 213
+ CPS K
Sbjct: 212 DLCPSCGK 219
>gi|317488242|ref|ZP_07946810.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325830754|ref|ZP_08164138.1| endonuclease III [Eggerthella sp. HGA1]
gi|316912654|gb|EFV34195.1| endonuclease III [Eggerthella sp. 1_3_56FAA]
gi|325487161|gb|EGC89604.1| endonuclease III [Eggerthella sp. HGA1]
Length = 220
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F + ++ LLS+ T DK + L + T + AD ++ +I + F+ KA N
Sbjct: 38 FRLTIAVLLSAQTTDKGVNKVTPALWER-YPTPADLAAADVRDVEGIIRTIGFFHTKAAN 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K A++ + Y G+IP +DEL LPG+G K AN+V+ + V+GI VDTHV RI +R
Sbjct: 97 VIKCAQMVVADYGGEIPRDIDELQKLPGVGRKTANVVLNEAFGIVEGIAVDTHVFRIAHR 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L + +P +T AL + P+E W IN V FG+ C P+C C +
Sbjct: 157 LKF-----AGPSADTPAKTEAALLKLYPREYWGPINHQWVLFGRETCIARNPKCATCFLC 211
Query: 206 EYCPSAFK 213
+ CPS K
Sbjct: 212 DLCPSCGK 219
>gi|153815003|ref|ZP_01967671.1| hypothetical protein RUMTOR_01218 [Ruminococcus torques ATCC 27756]
gi|317501555|ref|ZP_07959751.1| endonuclease III [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088583|ref|ZP_08337494.1| endonuclease III [Lachnospiraceae bacterium 3_1_46FAA]
gi|336440472|ref|ZP_08620059.1| endonuclease III [Lachnospiraceae bacterium 1_1_57FAA]
gi|145847571|gb|EDK24489.1| endonuclease III [Ruminococcus torques ATCC 27756]
gi|316897066|gb|EFV19141.1| endonuclease III [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407540|gb|EGG87040.1| endonuclease III [Lachnospiraceae bacterium 3_1_46FAA]
gi|336012917|gb|EGN42808.1| endonuclease III [Lachnospiraceae bacterium 1_1_57FAA]
Length = 207
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D + + L Q + +A AD ++ I P FY KA N+
Sbjct: 32 LLIATMLSAQCTDARVNIVTKDLFQK-YTSVDAFADADLKELEQDIKPTGFYRNKAKNII 90
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
K K+ G++P SL++L +L G+G K AN++ ++ + VDTHV RI NRLG
Sbjct: 91 ACMKDIREKFGGEVPRSLEDLTSLAGVGRKTANVIRG-NIYHDASVVVDTHVKRISNRLG 149
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ Q S PE+ + L + LPK+ W+ N ++ FG++ICT P+CG C + +Y
Sbjct: 150 FTKQ-------SDPEKIEQDLMKELPKDHWILYNIQIITFGRSICTARNPKCGECFLKKY 202
Query: 208 C 208
C
Sbjct: 203 C 203
>gi|183602757|ref|ZP_02964120.1| endonuclease III [Bifidobacterium animalis subsp. lactis HN019]
gi|219683144|ref|YP_002469527.1| endonuclease III [Bifidobacterium animalis subsp. lactis AD011]
gi|241191477|ref|YP_002968871.1| putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|241196882|ref|YP_002970437.1| putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|384194472|ref|YP_005580218.1| endonuclease III [Bifidobacterium animalis subsp. lactis BLC1]
gi|384196038|ref|YP_005581783.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis V9]
gi|387821338|ref|YP_006301381.1| Endonuclease III [Bifidobacterium animalis subsp. lactis B420]
gi|387823021|ref|YP_006302970.1| Endonuclease III [Bifidobacterium animalis subsp. lactis Bi-07]
gi|423680007|ref|ZP_17654883.1| endonuclease III [Bifidobacterium animalis subsp. lactis BS 01]
gi|183217995|gb|EDT88643.1| endonuclease III [Bifidobacterium animalis subsp. lactis HN019]
gi|219620794|gb|ACL28951.1| endonuclease III [Bifidobacterium animalis subsp. lactis AD011]
gi|240249869|gb|ACS46809.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis Bl-04]
gi|240251436|gb|ACS48375.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis DSM 10140]
gi|295794469|gb|ADG34004.1| Putative EndoIII-related endonuclease [Bifidobacterium animalis
subsp. lactis V9]
gi|345283331|gb|AEN77185.1| endonuclease III [Bifidobacterium animalis subsp. lactis BLC1]
gi|366041006|gb|EHN17519.1| endonuclease III [Bifidobacterium animalis subsp. lactis BS 01]
gi|386654039|gb|AFJ17169.1| Endonuclease III [Bifidobacterium animalis subsp. lactis B420]
gi|386655629|gb|AFJ18758.1| Endonuclease III [Bifidobacterium animalis subsp. lactis Bi-07]
Length = 247
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 4/207 (1%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L TA A+ A ++ +I P+ FY KA +
Sbjct: 37 FELLVATILSAQTTDKRVNSITPELF-GTYPTAAALADARLEDVESIIRPLGFYHVKAEH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A+ + ++ G IP +++EL +LPG+G K AN+V+ F V G VDTHV R+ R
Sbjct: 96 IIAVARQIVERFGGQIPQTMEELTSLPGVGRKTANVVLG-NAFRVPGFPVDTHVIRVTGR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + + +++PE+ + + P+ EW ++ L+ FG+ ICT P C C +
Sbjct: 155 LHW--RDDWMKTSTTPERIEQEITGCFPESEWTDLSHRLIIFGRNICTSRSPECENCPLL 212
Query: 206 EYCPSAFKESSTSSSKSKKSESSSLRK 232
CPSA + ++ + ++ + RK
Sbjct: 213 PTCPSAGEFLEIAAERKARATRRAPRK 239
>gi|422327448|ref|ZP_16408475.1| endonuclease III [Erysipelotrichaceae bacterium 6_1_45]
gi|371663288|gb|EHO28478.1| endonuclease III [Erysipelotrichaceae bacterium 6_1_45]
Length = 215
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L + T +A+ +AD I+D I + Y KA +
Sbjct: 27 FELLIAVVLSAQTTDAAVNKVTPALFE-AFKTPQAMAEADIHDIEDKIRRIGLYRNKARS 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++ L ++G +P S+ EL +L G+G K AN+V ++ F++ I VDTHV RI R
Sbjct: 86 IQNLSRSLLESFNGVVPESMKELTSLAGVGRKTANVVRSV-CFDIPSIAVDTHVERISKR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + S E + L+R L +E W R + L + FG+ CT P+C C
Sbjct: 145 LGLA------KVQDSVEVVEQKLKRKLKRERWNRAHHLFIFFGRYFCTARNPKCEECPFK 198
Query: 206 EYCPSAFKESSTSSSKS 222
E+C E+ +S KS
Sbjct: 199 EFCKKDKLEAYRNSKKS 215
>gi|384190110|ref|YP_005575858.1| Endonuclease III [Bifidobacterium animalis subsp. lactis BB-12]
gi|384192901|ref|YP_005578648.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
gi|289177602|gb|ADC84848.1| Endonuclease III [Bifidobacterium animalis subsp. lactis BB-12]
gi|340365638|gb|AEK30929.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium animalis
subsp. lactis CNCM I-2494]
Length = 288
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 111/207 (53%), Gaps = 4/207 (1%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L TA A+ A ++ +I P+ FY KA +
Sbjct: 78 FELLVATILSAQTTDKRVNSITPELF-GTYPTAAALADARLEDVESIIRPLGFYHVKAEH 136
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A+ + ++ G IP +++EL +LPG+G K AN+V+ F V G VDTHV R+ R
Sbjct: 137 IIAVARQIVERFGGQIPQTMEELTSLPGVGRKTANVVLGNA-FRVPGFPVDTHVIRVTGR 195
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + + +++PE+ + + P+ EW ++ L+ FG+ ICT P C C +
Sbjct: 196 LHW--RDDWMKTSTTPERIEQEITGCFPESEWTDLSHRLIIFGRNICTSRSPECENCPLL 253
Query: 206 EYCPSAFKESSTSSSKSKKSESSSLRK 232
CPSA + ++ + ++ + RK
Sbjct: 254 PTCPSAGEFLEIAAERKARATRRAPRK 280
>gi|358066130|ref|ZP_09152664.1| endonuclease III [Clostridium hathewayi WAL-18680]
gi|356695993|gb|EHI57618.1| endonuclease III [Clostridium hathewayi WAL-18680]
Length = 231
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 113/209 (54%), Gaps = 22/209 (10%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPVAFYTRK 82
+ +L++ ++S+ D + + L Q + ++K EA +K+L I+ FY K
Sbjct: 39 WQLLIAVIMSAQCTDARVNIVTKDLFQK----YDTLEKFAEADLKELERDIHSTGFYHNK 94
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG---ICVDTHV 139
A N+ K + +Y+G++PS+++EL +L G+G K AN++ N+ G I VDTHV
Sbjct: 95 AKNIIACCKELVERYNGEVPSTIEELTSLAGVGRKTANVIRG----NIYGEPSIVVDTHV 150
Query: 140 HRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
RI +LG+ K PE+ L + +PK+ W+ N ++ G++IC P+C
Sbjct: 151 KRISRKLGFA-------KEEDPEKIEYELMKVIPKDHWILWNIQIITLGRSICFARSPKC 203
Query: 200 GMCTVSEYCPSAFKESSTSSSKSKKSESS 228
C + EYCPSA + T+ KS+K ESS
Sbjct: 204 EECFLREYCPSA-ETKETAKPKSRKGESS 231
>gi|313901141|ref|ZP_07834629.1| endonuclease III [Clostridium sp. HGF2]
gi|373121433|ref|ZP_09535301.1| endonuclease III [Erysipelotrichaceae bacterium 21_3]
gi|312954099|gb|EFR35779.1| endonuclease III [Clostridium sp. HGF2]
gi|371665451|gb|EHO30616.1| endonuclease III [Erysipelotrichaceae bacterium 21_3]
Length = 215
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L + T +A+ +AD I+D I + Y KA +
Sbjct: 27 FELLVAVVLSAQTTDAAVNKVTPALFE-AFKTPQAMAEADIHDIEDKIRRIGLYRNKARS 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++ L ++G +P S+ EL +L G+G K AN+V ++ F++ I VDTHV RI R
Sbjct: 86 IQNLSRSLLESFNGVVPESMKELTSLAGVGRKTANVVRSV-CFDIPSIAVDTHVERISKR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + S E + L+R L +E W R + L + FG+ CT P+C C
Sbjct: 145 LGLA------KVQDSVEVVEQKLKRKLKRERWNRAHHLFIFFGRYFCTARNPKCEECPFK 198
Query: 206 EYCPSAFKESSTSSSKS 222
E+C E+ +S KS
Sbjct: 199 EFCKKDKLEAYRNSKKS 215
>gi|346314278|ref|ZP_08855799.1| endonuclease III [Erysipelotrichaceae bacterium 2_2_44A]
gi|345906636|gb|EGX76360.1| endonuclease III [Erysipelotrichaceae bacterium 2_2_44A]
Length = 215
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 104/197 (52%), Gaps = 8/197 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L + T +A+ +AD I+D I + Y KA +
Sbjct: 27 FELLVAVVLSAQTTDAAVNKVTPALFE-AFGTPQAMAEADIRDIEDKIRRIGLYRNKARS 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++ L +DG +P S+ EL +L G+G K AN+V ++ F++ I VDTHV RI R
Sbjct: 86 IQNLSRSLLESFDGVVPESMKELTSLAGVGRKTANVVRSV-CFDIPSIAVDTHVERISKR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + S E + L+R L +E W R + L + FG+ CT P+C C
Sbjct: 145 LGLA------KVQDSVEVVEQKLKRKLKRERWNRAHHLFIFFGRYFCTARNPKCEECPFK 198
Query: 206 EYCPSAFKESSTSSSKS 222
E+C E+ +S K+
Sbjct: 199 EFCKKDKLEAYRNSKKA 215
>gi|421526583|ref|ZP_15973190.1| endonuclease III [Fusobacterium nucleatum ChDC F128]
gi|402257140|gb|EJU07615.1| endonuclease III [Fusobacterium nucleatum ChDC F128]
Length = 216
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E + I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEDFANMELEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRLTNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V P + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 IGLVNN-------EDPIKIELDLMKIVPKKSWIVFSHYLILHGRATCIARRPKCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
EYC K+ S +
Sbjct: 203 EYCNYGVKKLSNDN 216
>gi|269217530|ref|ZP_06161384.1| endonuclease III [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212465|gb|EEZ78805.1| endonuclease III [Actinomyces sp. oral taxon 848 str. F0332]
Length = 190
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + RL + EA+ AD ++D+++P+ FY KA +
Sbjct: 7 FELLVATVLSAQTTDARVNTVTPRLFE-AYPGPEALAGADRLELEDILHPLGFYRAKAAS 65
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+A + G++P +L+EL+ LPG+G K AN+V+ F V GI VDTHV R+ R
Sbjct: 66 CIGLAASLCANHGGEVPRTLEELVKLPGVGRKTANVVLG-NAFGVPGITVDTHVGRLARR 124
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
W ++ P + + R +P+ EW + ++ G+ +C +P CG C ++
Sbjct: 125 WAWT-------RSEDPVKVEADIARLIPESEWTQACHRIIFHGRQVCRARKPACGACALA 177
Query: 206 EYCPS 210
+ CPS
Sbjct: 178 DVCPS 182
>gi|300087945|ref|YP_003758467.1| endonuclease III [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527678|gb|ADJ26146.1| endonuclease III [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 213
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L + +LS+ T D + L + TA AD A ++ ++ FY KA ++
Sbjct: 34 LLAAVILSAQTTDAAVNSVTSALFEK-YRTAPDYADADVAELETIVRRTGFYHNKARSLI 92
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ ++ + K+DG +P ++ EL+ +PG K AN+V+ + ++GI VDTHV R+ RLG
Sbjct: 93 GMGRLLVEKFDGQVPQTMAELIQIPGAARKTANIVLWNAFGKIEGIAVDTHVARLAKRLG 152
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ + P++ + L + +P EEW R L+ G+ IC +P+C C + E
Sbjct: 153 Y-------SQEKDPDKIEKNLMKIVPHEEWGRFPHLIQEHGRVICFARKPKCVECFMKEI 205
Query: 208 CPSAF 212
CP+AF
Sbjct: 206 CPTAF 210
>gi|397690878|ref|YP_006528132.1| endonuclease III [Melioribacter roseus P3M]
gi|395812370|gb|AFN75119.1| endonuclease III [Melioribacter roseus P3M]
Length = 233
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 9/192 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + +L + + I E KD IY FY +KA +
Sbjct: 50 FELLIATILSAQCTDERVNIVTDKLFKKYKKPDDYIKVKSEELEKD-IYSTGFYKQKAKS 108
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K + + KY G +P+ + L LPG+G K A++V F + I VDTHV R+ N
Sbjct: 109 IKNCCRELIEKYGGKVPADFEALTKLPGVGRKTASVVAG-NAFGIPSIAVDTHVIRLTNL 167
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+V +TS P++ L+ LP++ W+ + LL+ G+ IC RP+C C++S
Sbjct: 168 LGFV-------ETSDPKKIEFKLKELLPEDLWIVSSHLLMSHGRKICIARRPKCDECSIS 220
Query: 206 EYCPSAFKESST 217
YCPS K + T
Sbjct: 221 NYCPSKNKNTVT 232
>gi|269122255|ref|YP_003310432.1| endonuclease III [Sebaldella termitidis ATCC 33386]
gi|268616133|gb|ACZ10501.1| endonuclease III [Sebaldella termitidis ATCC 33386]
Length = 219
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 109/198 (55%), Gaps = 10/198 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ D + + L + + + + + D I+ I FY KA N
Sbjct: 31 YQLLIAVILSAQCTDVRVNIVTKELFK-IVKGPKDLAEMDLKEIEKHIRSTGFYKNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ ++ L KY+G++P++++EL L G+G K AN+V+ W +GI VDTHV R+ NR
Sbjct: 90 IQMCSRQLLEKYNGEVPNTMEELRGLAGVGRKTANVVLGDIWNIREGIVVDTHVKRLSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V K+ +PE + L +++PK+ W + L+ G+ C +P+C +C +
Sbjct: 150 IGFV-------KSDNPEIIEKELMKFIPKKHWFEYSHYLILHGRDKCIARKPKCEICEIK 202
Query: 206 EYCPSAFKESSTSSSKSK 223
EYC + E++ +K K
Sbjct: 203 EYC--KYYETNLKKNKEK 218
>gi|57234287|ref|YP_181660.1| endonuclease III [Dehalococcoides ethenogenes 195]
gi|57224735|gb|AAW39792.1| endonuclease III [Dehalococcoides ethenogenes 195]
Length = 218
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 8/187 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + DK+ + L + +A A A ++ I F+ KA N
Sbjct: 34 FEMLVATILSAQSTDKMINKITPALFKK-YPGVQAFADASLAELEQDIKSSGFFHNKALN 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ A+ ++++ GD+P ++ ++L LPG+G K AN+V+ + V+GI VDTHV R+ R
Sbjct: 93 IIGAARAVVSRFGGDVPRNMADMLTLPGVGRKTANVVLHNAFGLVEGIAVDTHVKRLAGR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG T + P + + L +P+ EW + L+ G+ +C +PRC C ++
Sbjct: 153 LGLSTN-------TDPVKIEQDLMALIPRSEWGNFSYYLIDHGRAVCDAKKPRCPECVLN 205
Query: 206 EYCPSAF 212
+ CPSAF
Sbjct: 206 DICPSAF 212
>gi|260891368|ref|ZP_05902631.1| endonuclease III [Leptotrichia hofstadii F0254]
gi|260858751|gb|EEX73251.1| endonuclease III [Leptotrichia hofstadii F0254]
Length = 219
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ ++++ +LS+ D + + L + + E I K D ++ I FY KA N
Sbjct: 31 YQLMVAVILSAQCTDARVNIVTKELFK-VVRKPEDIRKMDLGILEKYIKSTGFYKNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K A++ L KY+ IP L++L+ LPG+G K AN+V+ W +GI VDTHV R+ NR
Sbjct: 90 IKLNAEMMLEKYNDVIPKDLEKLVELPGVGRKTANVVLGELWNIREGIVVDTHVKRLSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V K +PE L +++PK +W + ++ G+ C +P+C +C +
Sbjct: 150 IGFV-------KNDNPEIIERELMKFVPKRDWFVYSHYMILHGRDKCIARKPKCEICEIR 202
Query: 206 EYC 208
+YC
Sbjct: 203 DYC 205
>gi|294784441|ref|ZP_06749732.1| endonuclease III [Fusobacterium sp. 3_1_27]
gi|294488013|gb|EFG35368.1| endonuclease III [Fusobacterium sp. 3_1_27]
Length = 216
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E + I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMELEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEIPKDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 IGLVD-------SEDPIKIELELMKIVPKKSWIDFSHYLILHGRATCIARRPKCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 203 KYCNYGIKKLSNEN 216
>gi|448734378|ref|ZP_21716604.1| endonuclease III [Halococcus salifodinae DSM 8989]
gi|445800426|gb|EMA50781.1| endonuclease III [Halococcus salifodinae DSM 8989]
Length = 227
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
RF +L++ +LS+ D+ + L + + EA A + + + + + +Y KA
Sbjct: 35 RFELLVAVILSAQCTDERVNKTTADLFET-YPSPEAFANAPQEELAEALNSITYYNNKAS 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+++ A++ + ++DG++P ++ L LPG+G K AN+V+ V+GI VDTHV RI
Sbjct: 94 YIRESAQLVVEEHDGEVPDTMAALTDLPGVGRKTANVVLQHAHDVVEGIVVDTHVQRITR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE+ L ++P++ W L + G+ CT P C CT+
Sbjct: 154 RLGLTDE-------ERPEKIESDLMGFVPEDRWQAFTHLFISHGRATCTARNPDCADCTL 206
Query: 205 SEYCPSAFKESS 216
+ CPS+ ++S+
Sbjct: 207 EDVCPSSKRDSA 218
>gi|417960104|ref|ZP_12602758.1| Endonuclease III [Candidatus Arthromitus sp. SFB-1]
gi|380331776|gb|EIA22753.1| Endonuclease III [Candidatus Arthromitus sp. SFB-1]
Length = 209
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + + L + + K DE +KD I + Y K+ N
Sbjct: 29 FQLLIATVLSAQTTDKKVNEVTKNLFIEYPRLEDFL-KLDEKELKDKIKSIGLYRMKSKN 87
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + +I ++D ++P + DEL+ LPG+G K AN+V++ F VQ VD HV R+ NR
Sbjct: 88 IINLCRILEERFDSEVPRTRDELITLPGVGRKTANVVIS-NCFGVQAFAVDVHVFRVSNR 146
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G P +PE+T L + + + W + ++ G+ CT +P CG C +S
Sbjct: 147 IGIANSP-------TPEKTELDLMKNIDENLWTICHHTIIFHGRRCCTSRKPNCGECKIS 199
Query: 206 EYC 208
EYC
Sbjct: 200 EYC 202
>gi|417002349|ref|ZP_11941738.1| endonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479490|gb|EGC82586.1| endonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 100/190 (52%), Gaps = 9/190 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + D V + +++ ++T E KAD TI++ I V Y KA N
Sbjct: 16 FELLVATILSAQSTD-VRVNKVTKVMFADMNTPEEFAKADIKTIENYIRTVGIYKNKAKN 74
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +KI Y+ ++P+ + EL+ LPG+G K AN+V + F + I VDTHV R+ NR
Sbjct: 75 ISATSKILYNDYNSEVPADIKELMKLPGVGRKTANVVAS-NAFGIPAIAVDTHVFRVANR 133
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + E+T + L + +PKE W + + L+ G+ IC P C C +
Sbjct: 134 LGLASAKNV-------EKTEDQLMKNIPKERWRKTHHQLITHGRAICKARNPLCEECNMK 186
Query: 206 EYCPSAFKES 215
C +E+
Sbjct: 187 ITCEYYRREN 196
>gi|237743208|ref|ZP_04573689.1| endonuclease III [Fusobacterium sp. 7_1]
gi|289765578|ref|ZP_06524956.1| endonuclease III [Fusobacterium sp. D11]
gi|229433504|gb|EEO43716.1| endonuclease III [Fusobacterium sp. 7_1]
gi|289717133|gb|EFD81145.1| endonuclease III [Fusobacterium sp. D11]
Length = 216
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMKLEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G++P +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEVPQDMDKLTELAGVGRKTANVVRGDIWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGLVD-------SEDPIKIELELMKIVPKKSWINFSHYLILHGRATCIARRPRCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 203 KYCNYGIKKLSNEN 216
>gi|254302476|ref|ZP_04969834.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
gi|148322668|gb|EDK87918.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. polymorphum ATCC 10953]
Length = 216
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMKLEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G++P +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEVPQDMDKLTELAGVGRKTANVVRGDIWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGLVD-------SEDPIKIELELMKIVPKKSWINFSHYLILHGRATCIARRPRCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 203 KYCNYGIKKLSNDN 216
>gi|55980081|ref|YP_143378.1| endonuclease III [Thermus thermophilus HB8]
gi|55771494|dbj|BAD69935.1| endonuclease III [Thermus thermophilus HB8]
Length = 220
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ DK + A L A+A+ +A ++ I + Y K
Sbjct: 39 ENPFQLLVATVLSAQATDKSVNEATPALFAR-FPDAKALAEATPEEVEPYIRRIGLYRTK 97
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ +A+ + +Y G++P + L+ LPG+G K A +V+ F V GI VDTHV R+
Sbjct: 98 AKNLVALARRLVEEYGGEVPKEKEALMRLPGVGWKTATVVLGAA-FGVPGIAVDTHVARL 156
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RL + + +PE+ + L+ PKE+WV ++ LV G+ +CT RPRC C
Sbjct: 157 ARRLCF-------SEAKAPERIGKDLEALFPKEDWVFVHHALVLHGRYVCTARRPRCRAC 209
Query: 203 TVSEYCPS 210
++ YCPS
Sbjct: 210 VLAPYCPS 217
>gi|339442257|ref|YP_004708262.1| hypothetical protein CXIVA_11940 [Clostridium sp. SY8519]
gi|338901658|dbj|BAK47160.1| hypothetical protein CXIVA_11940 [Clostridium sp. SY8519]
Length = 214
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 103/191 (53%), Gaps = 9/191 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L++ +LS+ D + + L Q T + +AD ++ I + FY K
Sbjct: 29 ENAWQLLIAVILSAQCTDARVNLVTKDLYQK-YDTLQKFAEADVEEMEQDIRSIGFYRNK 87
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ A+ ++ + G++PS+L++L++LPG+G K AN++ + I VDTHV RI
Sbjct: 88 ARNIINCARKLISDFGGEVPSALEDLISLPGVGRKTANVIRG-NIYKDPSIVVDTHVKRI 146
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRLG+ K PE+ L + LPK+ W+ N ++ G+TICT P+CG C
Sbjct: 147 SNRLGFT-------KEQDPEKIEYDLMKKLPKDHWISYNMQIITLGRTICTARSPKCGEC 199
Query: 203 TVSEYCPSAFK 213
+S+ C + K
Sbjct: 200 FLSDLCKAEDK 210
>gi|444308017|ref|ZP_21143714.1| endonuclease III [Arthrobacter sp. SJCon]
gi|443479663|gb|ELT42661.1| endonuclease III [Arthrobacter sp. SJCon]
Length = 285
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D V + LL A A+ +AD AT++++I P F+ K+ N
Sbjct: 61 FELLVATVLSAQTTD-VTVNQITPLLFARYPDARAMAEADPATLEEIIKPTGFFRAKSRN 119
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + YDG +P +++L+ LPG+G K AN+V+ F + GI VDTH R+ R
Sbjct: 120 LLALATRLVDDYDGVVPGRIEDLVTLPGVGRKTANVVLG-NAFGIPGITVDTHFGRLARR 178
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW ++ P Q + +W ++ +V G+ +C +P CG C V+
Sbjct: 179 FGWT-------QSEDPVQIEADVAELFEPRDWTMLSHRVVFHGRRVCHSRKPACGACPVA 231
Query: 206 EYCPSAFKESSTSSSKSKK 224
+CPS + T +K+ K
Sbjct: 232 NWCPS-YGLGETDPAKAAK 249
>gi|448374749|ref|ZP_21558539.1| endonuclease III [Halovivax asiaticus JCM 14624]
gi|445659875|gb|ELZ12677.1| endonuclease III [Halovivax asiaticus JCM 14624]
Length = 227
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + + L + + E A + + + + + FY KA
Sbjct: 35 RLELLIAVILSAQCTDERVNAETEHLFET-YQSPEDYANAPQEELAEALNSINFYNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+++ + + ++DG++P ++DEL LPG+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIREACALIVEEHDGEVPDTMDELTELPGVGRKTANVVLQHGHDVVEGIVVDTHVQRLTR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE + L +P+ WV+ LL+ G+ CT P C C +
Sbjct: 154 RLGITEE-------ERPEAIEQDLLDIVPEGYWVQFTHLLIDHGRATCTARNPDCESCVL 206
Query: 205 SEYCPSAFKESSTS 218
++ CPS +S
Sbjct: 207 ADICPSEKGDSDVD 220
>gi|336401809|ref|ZP_08582566.1| endonuclease III [Fusobacterium sp. 21_1A]
gi|336160407|gb|EGN63455.1| endonuclease III [Fusobacterium sp. 21_1A]
Length = 216
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMKLEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G++P +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEVPQDMDKLTELAGVGRKTANVVRGDIWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGLVD-------SEDPIKIELELMKIVPKKSWINFSHYLILHGRATCIARRPRCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
YC K+ S +
Sbjct: 203 RYCNYGIKKLSNEN 216
>gi|423137746|ref|ZP_17125389.1| endonuclease III [Fusobacterium nucleatum subsp. animalis F0419]
gi|371959215|gb|EHO76907.1| endonuclease III [Fusobacterium nucleatum subsp. animalis F0419]
Length = 216
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMKLEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G++P +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEVPQDMDKLTELAGVGRKTANVVRGDIWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGLVD-------SEDPIKIELELMKIVPKKSWINFSHYLILHGRATCIARRPRCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
YC K+ S +
Sbjct: 203 RYCNYGIKKLSNEN 216
>gi|417941763|ref|ZP_12585045.1| Endonuclease III [Bifidobacterium breve CECT 7263]
gi|376168005|gb|EHS86818.1| Endonuclease III [Bifidobacterium breve CECT 7263]
Length = 222
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + +A A I+D+I+P+ FY K ++
Sbjct: 38 LLIATVLSAQTTDKRVNTVTPELFAT-YPTAHDLAEASPAQIEDIIHPLGFYRSKTQHLI 96
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++DG +P S+DEL +LPG+G K AN+V+ F + G VDTHV R+ RL
Sbjct: 97 GLATALDERFDGQVPQSMDELTSLPGVGRKTANVVLG-NAFGIPGFPVDTHVMRVTGRLR 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + P EEW ++ L+ FG++ C P C C ++
Sbjct: 156 WRSD--WRSTHPDPVKIEREITACFPPEEWTDLSHRLILFGRSTCHARTPDCANCPLAAT 213
Query: 208 CPSA 211
CPSA
Sbjct: 214 CPSA 217
>gi|225872370|ref|YP_002753825.1| endonuclease III [Acidobacterium capsulatum ATCC 51196]
gi|225793386|gb|ACO33476.1| endonuclease III [Acidobacterium capsulatum ATCC 51196]
Length = 230
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 105/191 (54%), Gaps = 8/191 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D + +L ++ T +A+ +A I++ + FY KA ++
Sbjct: 46 LLVATILSAQCTDARVNMVTPKLFRD-FPTPQAMAQATPEAIEEYVKSTGFYRNKAKSIH 104
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
AK + Y G +P S+DELL LPG K AN+V+ + + +G+ VDTHV R+ NRLG
Sbjct: 105 GAAKRLVEVYGGKLPESMDELLTLPGAARKTANVVLGVAFGKAEGVVVDTHVLRLSNRLG 164
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
V ++ P++ + L + LP+E W++ + ++ G+ +C +P+C +CT+
Sbjct: 165 LVN-------SNDPKKVEQELMQILPRERWIQFSHEMIYHGRQVCDARKPKCEVCTLETL 217
Query: 208 CPSAFKESSTS 218
C S K S++
Sbjct: 218 CHSGDKTWSSA 228
>gi|383784019|ref|YP_005468587.1| endonuclease III/Nth [Leptospirillum ferrooxidans C2-3]
gi|383082930|dbj|BAM06457.1| putative endonuclease III/Nth [Leptospirillum ferrooxidans C2-3]
Length = 212
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 101/185 (54%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + DK + L + E++ +A + ++ LI F+ RK+
Sbjct: 33 FELLVATVLSAQSTDKTVNTITPTLFRK-FPDPESMARASLSDLEGLIRSAGFFHRKSLQ 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ + + G +P ++DEL+ LPG+G K A++V+ G F++ I VDTHV R+ NR
Sbjct: 92 LIGLSRAIVDHFHGKVPDNIDELVKLPGVGRKTASVVLAYG-FHIPAIAVDTHVIRVSNR 150
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG +S PE+ L +P+E+W+ L+ G+ +C +P CG C +S
Sbjct: 151 LGLTV-------SSDPEEIESDLCSIIPREDWINSGSRLLLHGRYVCVARKPLCGSCVLS 203
Query: 206 EYCPS 210
CPS
Sbjct: 204 NLCPS 208
>gi|384196479|ref|YP_005582223.1| endonuclease III [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333110138|gb|AEF27154.1| endonuclease III [Bifidobacterium breve ACS-071-V-Sch8b]
Length = 222
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 97/184 (52%), Gaps = 4/184 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + +A A I+D+I+P+ FY K ++
Sbjct: 38 LLIATVLSAQTTDKRVNTVTPELFAT-YPTAHDLAEASPAQIEDIIHPLGFYRSKTQHLI 96
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++DG +P S+DEL +LPG+G K AN+V+ F + G VDTHV R+ RL
Sbjct: 97 GLATALDERFDGQVPQSMDELTSLPGVGRKTANVVLG-NAFGIPGFPVDTHVMRVTGRLR 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + P EEW ++ L+ FG++ C P C C ++
Sbjct: 156 WRSD--WRSTHPDPVKIEREITACFPPEEWTDLSHRLILFGRSTCHARTPDCANCPLAAT 213
Query: 208 CPSA 211
CPSA
Sbjct: 214 CPSA 217
>gi|57641076|ref|YP_183554.1| endonuclease III [Thermococcus kodakarensis KOD1]
gi|57159400|dbj|BAD85330.1| endonuclease III [Thermococcus kodakarensis KOD1]
Length = 246
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 10/188 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP--VAFYTRKA 83
+ L+ ++S +D+V + L + E I +++ + V + K
Sbjct: 48 YRTLVHCIISQRMRDEVTYRVWEELFKK-YKDIETIANTPVEEMQEFLRKQGVGLWKTKG 106
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ K +KI L +Y G +P + EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 107 EWIVKASKIILERYGGKVPDDIHELMKLPGIGRKCANIVLAYG-FGKQAIPVDTHVNRIS 165
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P +PE+ E L +PKE+W+ +N +V G++IC P+ P+C C
Sbjct: 166 KRLG-LAPPRV-----APEKVEEYLTALIPKEKWIYVNHAMVDHGRSICRPINPKCEECP 219
Query: 204 VSEYCPSA 211
+ E+CP A
Sbjct: 220 LREFCPYA 227
>gi|339478541|gb|ABE94996.1| Endonuclease III [Bifidobacterium breve UCC2003]
Length = 222
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + +A+ A ++D+I+P+ FY K ++
Sbjct: 38 LLIATVLSAQTTDKRVNTVTPELFAT-YPTAHDLAEANPAQVEDIIHPLGFYRSKTQHLI 96
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++DG IP S+DEL +LPG+G K AN+V+ F + G VDTHV R+ RL
Sbjct: 97 GLATALDERFDGQIPQSMDELTSLPGVGRKTANVVLG-NAFGIPGFPVDTHVMRVTGRLR 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + P EEW ++ L+ FG++ C P C C ++
Sbjct: 156 W--RSDWRSTHLDPVKIEREITACFPPEEWTDLSHRLILFGRSTCHARTPDCANCPLAAT 213
Query: 208 CPSA 211
CPSA
Sbjct: 214 CPSA 217
>gi|336420111|ref|ZP_08600353.1| endonuclease III [Fusobacterium sp. 11_3_2]
gi|336162073|gb|EGN65062.1| endonuclease III [Fusobacterium sp. 11_3_2]
Length = 192
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E I++ I F+ KA N
Sbjct: 7 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMKLEEIENYIKSTGFFRNKAKN 65
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G++P +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 66 IKKCSEQLLEKYNGEVPQDMDKLTELAGVGRKTANVVRGDIWGLADGITVDTHVKRLSNL 125
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 126 IGLVD-------SEDPIKIELELMKIVPKKSWINFSHYLILHGRATCIARRPRCSECEIS 178
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 179 KYCNYGIKKLSNEN 192
>gi|427412433|ref|ZP_18902625.1| endonuclease III [Veillonella ratti ACS-216-V-Col6b]
gi|425716240|gb|EKU79224.1| endonuclease III [Veillonella ratti ACS-216-V-Col6b]
Length = 212
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 102/190 (53%), Gaps = 9/190 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + RL A+ + A ++ LI Y KA N
Sbjct: 32 FELLVAVVLSAQCTDERVNIITARLFPTYSDPADML-ALGTAKLEVLIRDCGLYRAKAAN 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K + + Y G++PS D+L+ LPG+G K AN+++++ F+ I VDTHV R+ NR
Sbjct: 91 LIKTCDLLVNTYGGEVPSEFDKLVQLPGVGRKTANVLISV-LFDTPAIAVDTHVFRVSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG K +PE+ E L++ +P E+W + L+ G+ IC +P CG C ++
Sbjct: 150 LGLA-------KGKTPEEVEEKLKKAIPMEKWSAAHHWLIWHGRKICKARKPLCGECPLA 202
Query: 206 EYCPSAFKES 215
CPSA KE+
Sbjct: 203 HICPSAGKEA 212
>gi|442323962|ref|YP_007363983.1| base excision DNA repair protein [Myxococcus stipitatus DSM 14675]
gi|441491604|gb|AGC48299.1| base excision DNA repair protein [Myxococcus stipitatus DSM 14675]
Length = 233
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T D+V+ A LLQ T +A+ + I LI PV F+ KA
Sbjct: 51 FEQLVACVLSIRTLDEVSLPASLALLQKA-STPDALARMSPGDIDALIQPVTFHEAKAHQ 109
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA + G +P L + G+GPK A++ + + + I VD HVHR+ NR
Sbjct: 110 LHAIAVRTRDELGGALPCDAQVLQSFKGVGPKCAHLALGIACGH-DVISVDIHVHRVTNR 168
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V KT +P+ T EAL+ LP+ WV IN LLV FG+ +CT RPRC C V
Sbjct: 169 WGYV-------KTRTPQATLEALEARLPRRYWVEINRLLVPFGKHVCTGARPRCSTCPVL 221
Query: 206 EYC 208
+ C
Sbjct: 222 KQC 224
>gi|374296575|ref|YP_005046766.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Clostridium clariflavum DSM 19732]
gi|359826069|gb|AEV68842.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Clostridium clariflavum DSM 19732]
Length = 214
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 14/208 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K + +YS + D +L K+ +L+S L++ D + Q L + T
Sbjct: 11 IKIFDKLYS----DADCTLDYKDP-LQLLISTQLAAQCTDARVNIVTQSLYKK-YKTVYD 64
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
AD + ++ I P FY KA N+K+ +I + K+DG +P +LD+LL LPG+G K AN
Sbjct: 65 FANADLSELEQDIKPTGFYRNKARNIKETCRILIEKFDGKVPDNLDDLLTLPGVGRKTAN 124
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ + + GI VDTH R+ NR+G K P + L + +PKE W +
Sbjct: 125 LVLG-DVYGIPGIVVDTHAKRLSNRIGL-------SKNEDPVKIEYDLMKIVPKERWGKF 176
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
LV G+ +C +P+C C + YC
Sbjct: 177 CHQLVYHGRAVCNARKPKCEECAILNYC 204
>gi|309810814|ref|ZP_07704615.1| endonuclease III [Dermacoccus sp. Ellin185]
gi|308435120|gb|EFP58951.1| endonuclease III [Dermacoccus sp. Ellin185]
Length = 277
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 89/156 (57%), Gaps = 9/156 (5%)
Query: 69 IKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWF 128
+++++ P FY K + K+++ + ++DG++P LD+L+ LPG+G K AN+V+ F
Sbjct: 85 MEEILRPTGFYRAKTRAVIKLSQDIVERFDGEVPGRLDDLVTLPGVGRKTANVVLG-NAF 143
Query: 129 NVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFG 188
V GI VDTH R+ R GW T + P + + PK++W ++ +++ G
Sbjct: 144 GVPGITVDTHFGRLARRFGWTT-------SEDPVKVEAEVGALFPKKDWTMLSHVVIFHG 196
Query: 189 QTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+ IC RP CG+C V+++CPS F E + ++K
Sbjct: 197 RRICHARRPACGVCPVAQWCPS-FGEGEIDADAARK 231
>gi|296328749|ref|ZP_06871263.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
gi|296154084|gb|EFG94888.1| DNA-(apurinic or apyrimidinic site) lyase [Fusobacterium nucleatum
subsp. nucleatum ATCC 23726]
Length = 214
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E + I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMELEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRLTNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGLVD-------SEDPVKIELELMKIVPKKSWIVFSHYLILHGRATCIARRPRCLECEIS 202
Query: 206 EYCPSAFKESS 216
+YC K+ S
Sbjct: 203 KYCNYGIKKLS 213
>gi|218295273|ref|ZP_03496109.1| endonuclease III [Thermus aquaticus Y51MC23]
gi|218244476|gb|EED11001.1| endonuclease III [Thermus aquaticus Y51MC23]
Length = 217
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K L+ +Y E P F +L++ +LS+ DK + A L A+A
Sbjct: 19 LKALKALYPGARTELKHENP-----FQLLVATVLSAQATDKSVNEATPALFAR-FPDAKA 72
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ A ++ I + Y KA N+ +A+ L Y G++P + L+ LPG+G K A
Sbjct: 73 LAAATPEEVEPYIRKIGLYRTKARNLVALARRLLEDYGGEVPRDKEALMRLPGVGWKTAT 132
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ F V GI VDTHV R+ RL + +PE+ E L+ PK+ WV +
Sbjct: 133 VVLGAA-FGVPGIAVDTHVARLARRLCL-------SEARTPEKIAEDLEALFPKDHWVFV 184
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
+ LV G+ +CT RPRCG C ++ +CPS
Sbjct: 185 HHALVLHGRYVCTARRPRCGACPLAPHCPS 214
>gi|402836848|ref|ZP_10885379.1| endonuclease III [Mogibacterium sp. CM50]
gi|402269864|gb|EJU19133.1| endonuclease III [Mogibacterium sp. CM50]
Length = 218
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 107/222 (48%), Gaps = 23/222 (10%)
Query: 1 MKTLEPV-YSLGVDETDSSLPPKERR-------------FAVLLSALLSSLTKDKVADGA 46
MK ++P+ Y DE + L E F +LL+ +LS+ T D +
Sbjct: 1 MKKIKPIKYFKNSDEINEVLDTLEAEYPDAGCALHHDSIFHLLLAVVLSAQTTDASVNTV 60
Query: 47 LQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLD 106
L H + AD ++D+I + Y KA N+ I K+ ++YDG +P
Sbjct: 61 TPELFST-YHEPADLSAADINDVEDIIKKLGLYKNKAKNLVGIGKLLCSEYDGVVPQDFT 119
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
EL LPG+G K AN+V+++G F Q I VDTHV R+ NR+G V + +T
Sbjct: 120 ELQKLPGVGRKTANVVLSVG-FGEQHIAVDTHVFRVTNRIGLVDEDDVL-------KTER 171
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+L +PK W ++ + + G+ CT +P+C C +++ C
Sbjct: 172 SLMEIIPKHRWSHMHHVFIFHGRRCCTARKPKCESCCIADKC 213
>gi|260495310|ref|ZP_05815437.1| endonuclease III [Fusobacterium sp. 3_1_33]
gi|260197088|gb|EEW94608.1| endonuclease III [Fusobacterium sp. 3_1_33]
Length = 216
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + ++ ++T E I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTDEMFKH-VNTPEQFANMKLEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G++P +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSEQLLEKYNGEVPQDMDKLTELAGVGRKTANVVRGDIWGLADGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGLVD-------SEDPIKIELELMKIVPKKSWINFSHYLILHGRATCIARRPRCSECEIS 202
Query: 206 EYCPSAFKESSTSS 219
+YC K+ S +
Sbjct: 203 KYCNYGIKKLSNEN 216
>gi|294674100|ref|YP_003574716.1| endonuclease III [Prevotella ruminicola 23]
gi|294473695|gb|ADE83084.1| endonuclease III [Prevotella ruminicola 23]
Length = 211
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 109/183 (59%), Gaps = 7/183 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + L + A+++ KA+E I + I V++ KA +
Sbjct: 31 FQLLVAVVLSAQCTDKRINQVTPDLFAH-YPDAQSMAKAEEEDIFEWIRSVSYPNAKAKH 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++A++ + K++G++PS+LDELL LPG+G K AN++ ++ F + VDTHV R+ +R
Sbjct: 90 LVEMARVLMEKFNGEVPSTLDELLTLPGVGRKTANVIQSVA-FGKATLAVDTHVFRVAHR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V++ ++P + AL +++P+E+ + L+ G+ +CT +P C C +
Sbjct: 149 LGLVSKSD-----NTPYKVEMALTKYIPEEDIPNAHHWLLLHGRYVCTARKPHCEKCEIE 203
Query: 206 EYC 208
+YC
Sbjct: 204 KYC 206
>gi|240103334|ref|YP_002959643.1| Endonuclease III (nth) [Thermococcus gammatolerans EJ3]
gi|239910888|gb|ACS33779.1| Endonuclease III (nth) [Thermococcus gammatolerans EJ3]
Length = 230
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP--VAFYTRKA 83
+ L+ ++S +D+V + L + E I +++ + V + K
Sbjct: 41 YRTLIHCIISQRMRDEVTYRVWEELFKK-YGDIETIANTPVDEMREFLRKRGVGLWKTKG 99
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ K ++I L KY G +P + EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 100 EWIVKASRIILEKYGGKVPDDIKELMKLPGIGRKCANIVLAYG-FGRQAIPVDTHVNRIS 158
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P PE+ E L +PKE+W+ +N +V G++IC P+RP+C C
Sbjct: 159 KRLG-LAPPRV-----PPEKVEEYLMELIPKEKWIYVNHAMVDHGRSICRPIRPKCESCP 212
Query: 204 VSEYCPSA 211
+ E CP A
Sbjct: 213 LKELCPYA 220
>gi|359774946|ref|ZP_09278292.1| putative DNA glycosylase/AP lyase [Arthrobacter globiformis NBRC
12137]
gi|359307846|dbj|GAB12121.1| putative DNA glycosylase/AP lyase [Arthrobacter globiformis NBRC
12137]
Length = 306
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D V + LL + A A+ +AD A ++ +I P F+ K N
Sbjct: 82 FELLVATVLSAQTTD-VTVNLITPLLFSRYPDARAMAEADTAELEAIIKPTGFFRAKTRN 140
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + ++DG +P L++L+ LPG+G K AN+V+ F + GI VDTH R+ R
Sbjct: 141 LLALANRVVDEFDGVVPGRLEDLVTLPGVGRKTANVVLG-NAFGIPGITVDTHFGRLARR 199
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW ++ P + + +W ++ +V G+ +C +P CG C V+
Sbjct: 200 FGWT-------ESDDPVRIESDVAELFEPRDWTMLSHRVVFHGRRVCHSRKPACGACAVA 252
Query: 206 EYCPSAFKESSTSSSKSKK 224
+CPS F T+ +K+ K
Sbjct: 253 NWCPS-FGSGETNPAKAAK 270
>gi|42522185|ref|NP_967565.1| endo III-related endonuclease [Bdellovibrio bacteriovorus HD100]
gi|39574716|emb|CAE78558.1| Endo III-related endonuclease [Bdellovibrio bacteriovorus HD100]
Length = 221
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + L + T +A+ KA ++++LI FY KA N
Sbjct: 42 FELLVATILSAQCTDERVNMVTPALFKK-YPTPKAMAKAPVESLEELIRSTGFYKNKAKN 100
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV-QGICVDTHVHRICN 144
+K A + K+ G++P SL+ L+ L G+G K AN+V+ FN+ GI VDTHV R+ N
Sbjct: 101 LKACATTLVEKHHGEVPQSLEALVELGGVGRKTANVVLG-NAFNIPSGIVVDTHVTRLAN 159
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLGWV KT + L + +P E+W+ + L+ G+ +C +P C C +
Sbjct: 160 RLGWV-------KTDNAVMIERQLSKLVPVEDWIMLPHWLISHGRAVCKARKPACSHCFL 212
Query: 205 SEYCP 209
E CP
Sbjct: 213 EETCP 217
>gi|398784025|ref|ZP_10547333.1| endonuclease III [Streptomyces auratus AGR0001]
gi|396995473|gb|EJJ06487.1| endonuclease III [Streptomyces auratus AGR0001]
Length = 328
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L +Y E D + P F +L++ +LS+ T D + RL T E +
Sbjct: 86 RELAELYPYAHPELDFTNP-----FELLVATVLSAQTTDLRVNQTTPRLFAV-CPTPEDM 139
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
D +++LI P F+ KA ++ ++ ++ G++P L++L+ LPG+G K AN+
Sbjct: 140 AAMDPERLEELIRPTGFFRAKAKSLLGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANV 199
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ R GW T E+ + PK EW ++
Sbjct: 200 VLG-NAFGVPGITVDTHFGRLARRFGWTT-------AEDAEKVEADVAGIFPKSEWTMLS 251
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+V G+ +C +P CG C ++ CP A+ E T K+KK
Sbjct: 252 HRVVFHGRRVCHSRKPACGACAIAPLCP-AYGEGETDPEKAKK 293
>gi|381163450|ref|ZP_09872680.1| endonuclease III [Saccharomonospora azurea NA-128]
gi|418463030|ref|ZP_13034060.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Saccharomonospora azurea SZMC 14600]
gi|359734713|gb|EHK83682.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Saccharomonospora azurea SZMC 14600]
gi|379255355|gb|EHY89281.1| endonuclease III [Saccharomonospora azurea NA-128]
Length = 227
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L+ VY E D S P +L++ +LS+ D+ + L TA
Sbjct: 3 RCLDVVYPNAHCELDFSTP-----LELLVAVILSAQCTDERVNAVTPALFAR-YPTAADY 56
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD A +++LI P F+ KA ++ + + ++DG++P +LDEL+ LPG+G K AN+
Sbjct: 57 AGADRAELEELIRPTGFFRNKATSLMGLGAALVDRHDGEVPGTLDELVKLPGVGRKTANV 116
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F+V GI VDTH R+ R GW + P + + P++EW ++
Sbjct: 117 VLGEA-FDVPGITVDTHFGRLVRRWGWT-------DSEDPVKVEHEVGSLFPRKEWTMLS 168
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ G+ +C +P CG C +++ CPS
Sbjct: 169 HRVIFHGRRVCHARKPACGACPLAKDCPS 197
>gi|299140539|ref|ZP_07033677.1| endonuclease III [Prevotella oris C735]
gi|298577505|gb|EFI49373.1| endonuclease III [Prevotella oris C735]
Length = 229
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 107/188 (56%), Gaps = 7/188 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F ++++ LLS+ DK + L ++ TAEA+ +AD I LI V++ KA +
Sbjct: 31 FQLIVATLLSAQCTDKRINMITPELYRH-YPTAEAMAQADWEDIFQLIKSVSYPNSKAHH 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AKI + +++G++P + D+L LPG+G K AN+V + WF + VDTHV+R+ +R
Sbjct: 90 LSEMAKILVERFNGEVPDNTDDLTQLPGVGRKTANVVQAV-WFGKPTLAVDTHVYRVSHR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V + ++P + L +++PK + + L+ G+ IC RP+C C S
Sbjct: 149 LGLVPETA-----NTPLKVELELMKYIPKADVGNAHHWLLLHGRYICKSQRPQCQDCPFS 203
Query: 206 EYCPSAFK 213
+CP+ K
Sbjct: 204 TFCPTGVK 211
>gi|300711590|ref|YP_003737404.1| endonuclease III [Halalkalicoccus jeotgali B3]
gi|448296302|ref|ZP_21486361.1| endonuclease III [Halalkalicoccus jeotgali B3]
gi|299125273|gb|ADJ15612.1| endonuclease III [Halalkalicoccus jeotgali B3]
gi|445581963|gb|ELY36310.1| endonuclease III [Halalkalicoccus jeotgali B3]
Length = 227
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ +G L + + A E +D I + +Y KA
Sbjct: 35 RLELLIAVILSAQCTDERVNGVTADLFSKYDGLEDYANAAQEQLAED-ISSITYYNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+++ I + ++DG +P ++DEL LPG+G K AN+V+ G V+G+ VDTHV R+
Sbjct: 94 YIREACAIIIEEHDGGVPDTMDELTDLPGVGRKTANVVLQHGHELVEGVVVDTHVQRLTR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + SP++ L LP+E W L + G+ CT P C C +
Sbjct: 154 RLGITEE-------RSPQKIERELMALLPRERWQAFTHLCISHGRATCTARNPDCSDCVL 206
Query: 205 SEYCPSA 211
+ CPS+
Sbjct: 207 EDVCPSS 213
>gi|298675712|ref|YP_003727462.1| endonuclease III [Methanohalobium evestigatum Z-7303]
gi|298288700|gb|ADI74666.1| endonuclease III [Methanohalobium evestigatum Z-7303]
Length = 212
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 104/195 (53%), Gaps = 10/195 (5%)
Query: 20 PPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPV 76
P RF L++++ + D + R+ ++ +D A IK+L IY
Sbjct: 23 PEPALRFNNPFQLLIATILSAQATDTQVNRVTEHLFKKYPYVDDLANADIKELEKDIYST 82
Query: 77 AFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVD 136
FY KA N+KK A++ ++++ +P ++++++ L G+G K AN+V++ G+ +GI VD
Sbjct: 83 GFYKNKAKNIKKCAQMIKSQFNSKVPDNMNDMMELSGVGRKTANIVLSRGFGVHEGIAVD 142
Query: 137 THVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLR 196
THV R+ RLG T+ KT PE+ + L + K +W ++ +L+ G+ IC
Sbjct: 143 THVKRLSQRLGL-----TQNKT--PEKIEQDLMKLADKRDWDTLSLILILHGRKICHAKN 195
Query: 197 PRCGMCTVSEYCPSA 211
P C C V+ CPS+
Sbjct: 196 PECENCVVNTLCPSS 210
>gi|91774091|ref|YP_566783.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Methanococcoides burtonii DSM 6242]
gi|91713106|gb|ABE53033.1| Endonuclease III [Methanococcoides burtonii DSM 6242]
Length = 219
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 103/187 (55%), Gaps = 8/187 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + L + EA+ AD ++ IY FY K+ N
Sbjct: 40 FELLIATILSAQCTDVQVNKVTNELFRK-YTNVEALAAADLDVLEKEIYSTGFYRAKSKN 98
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+ +++ L+ ++G +P +++EL PG+ K AN+V+ G+ V+GI VDTHV R+ +
Sbjct: 99 IKRTSQLILSDFNGKVPDTMEELTTFPGVARKTANIVLARGFGKVEGIAVDTHVKRVSGK 158
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + + P++ + L + +++W ++ L+ G+ +C +P+C +C +S
Sbjct: 159 LGLT-------ENTDPKKIEQDLMKLAEQKDWEDLSMTLILHGRRVCDAKKPQCIVCLLS 211
Query: 206 EYCPSAF 212
+ CPS+
Sbjct: 212 KLCPSSL 218
>gi|443312519|ref|ZP_21042136.1| DNA-(apurinic or apyrimidinic site) lyase [Synechocystis sp. PCC
7509]
gi|442777497|gb|ELR87773.1| DNA-(apurinic or apyrimidinic site) lyase [Synechocystis sp. PCC
7509]
Length = 219
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + L + A A+ KAD ++ LI FY K+ N+K
Sbjct: 40 LLVATILSAQCTDERVNLVTPELFRR-FSDAAALAKADIEELEVLIRSTGFYRNKSKNIK 98
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ + +++G +P+S+++LL LPG+ K AN+V+ G+ G+ VDTHV R+C+RLG
Sbjct: 99 AACALLVQEFNGQVPASMEQLLKLPGVARKTANVVLAHGYNINAGVTVDTHVKRLCDRLG 158
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ S P + L R LP+ +W + LV +G+ +C P+C +C +++
Sbjct: 159 LT-------EYSDPIRIERDLMRLLPQPDWENWSIRLVYYGRAVCKARSPQCSVCILADL 211
Query: 208 CPSA 211
CPSA
Sbjct: 212 CPSA 215
>gi|262038946|ref|ZP_06012286.1| endonuclease III [Leptotrichia goodfellowii F0264]
gi|261747027|gb|EEY34526.1| endonuclease III [Leptotrichia goodfellowii F0264]
Length = 224
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + ++++ +LS+ D + + L + + T E I D T++ I FY K
Sbjct: 28 ETSYQLMIAVILSAQCTDARVNIVTKELFK-VVKTPEDIHNMDLETLEKYIKSTGFYRNK 86
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+K A+ L +Y+G IP +DEL+ L G+G K AN+V+ W +GI VDTHV R+
Sbjct: 87 AKNIKLNAEQVLNEYNGKIPKKMDELVKLAGVGRKTANVVLGEVWGISEGIVVDTHVKRL 146
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
R+G K+ +PE L + +PK+ W + L+ +G+ + T + P+C +C
Sbjct: 147 SKRMGLT-------KSDNPEIIERELMKIVPKKYWFVFSHYLILYGREVSTAINPKCDIC 199
Query: 203 TVSEYCPSAFKESS 216
+++Y KE +
Sbjct: 200 IINKYFNYCEKEKA 213
>gi|291455992|ref|ZP_06595382.1| endonuclease III [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291382401|gb|EFE89919.1| endonuclease III [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 222
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + +A+ A ++D+I+P+ FY K ++
Sbjct: 38 LLIATVLSAQTTDKRVNTVTPELFAT-YPTAHDLAEANPAQVEDIIHPLGFYRSKTQHLI 96
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++DG +P S+DEL +LPG+G K AN+V+ F + G VDTHV R+ RL
Sbjct: 97 GLATALDERFDGQVPQSMDELTSLPGVGRKTANVVLG-NAFGIPGFPVDTHVMRVTGRLR 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + P EEW ++ L+ FG++ C P C C ++
Sbjct: 156 W--RSDWRSTHLDPVKIEREITACFPPEEWTDLSHRLILFGRSTCHARTPDCANCPLAAT 213
Query: 208 CPSA 211
CPSA
Sbjct: 214 CPSA 217
>gi|23335629|ref|ZP_00120863.1| COG0177: Predicted EndoIII-related endonuclease [Bifidobacterium
longum DJO10A]
gi|23464990|ref|NP_695593.1| endonuclease III [Bifidobacterium longum NCC2705]
gi|189440057|ref|YP_001955138.1| EndoIII-related endonuclease [Bifidobacterium longum DJO10A]
gi|227545733|ref|ZP_03975782.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium longum
subsp. longum ATCC 55813]
gi|239622592|ref|ZP_04665623.1| endonuclease III [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|296453434|ref|YP_003660577.1| endonuclease III [Bifidobacterium longum subsp. longum JDM301]
gi|312133395|ref|YP_004000734.1| nth [Bifidobacterium longum subsp. longum BBMN68]
gi|322688415|ref|YP_004208149.1| endonuclease III [Bifidobacterium longum subsp. infantis 157F]
gi|322690434|ref|YP_004220004.1| endonuclease III [Bifidobacterium longum subsp. longum JCM 1217]
gi|384202230|ref|YP_005587977.1| endonuclease III [Bifidobacterium longum subsp. longum KACC 91563]
gi|419848731|ref|ZP_14371820.1| endonuclease III [Bifidobacterium longum subsp. longum 1-6B]
gi|419855237|ref|ZP_14377999.1| endonuclease III [Bifidobacterium longum subsp. longum 44B]
gi|23325590|gb|AAN24229.1| endonuclease III [Bifidobacterium longum NCC2705]
gi|189428492|gb|ACD98640.1| Putative EndoIII-related endonuclease [Bifidobacterium longum
DJO10A]
gi|227213849|gb|EEI81688.1| DNA-(apurinic or apyrimidinic site) lyase [Bifidobacterium longum
subsp. infantis ATCC 55813]
gi|239514589|gb|EEQ54456.1| endonuclease III [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|291517527|emb|CBK71143.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Bifidobacterium longum subsp. longum F8]
gi|296182865|gb|ADG99746.1| endonuclease III [Bifidobacterium longum subsp. longum JDM301]
gi|311772621|gb|ADQ02109.1| Nth [Bifidobacterium longum subsp. longum BBMN68]
gi|320455290|dbj|BAJ65912.1| endonuclease III [Bifidobacterium longum subsp. longum JCM 1217]
gi|320459751|dbj|BAJ70371.1| endonuclease III [Bifidobacterium longum subsp. infantis 157F]
gi|338755237|gb|AEI98226.1| endonuclease III [Bifidobacterium longum subsp. longum KACC 91563]
gi|386406935|gb|EIJ21927.1| endonuclease III [Bifidobacterium longum subsp. longum 1-6B]
gi|386415979|gb|EIJ30498.1| endonuclease III [Bifidobacterium longum subsp. longum 44B]
Length = 228
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + A+ A ++D+I+P+ FY K ++
Sbjct: 38 LLIATVLSAQTTDKRVNTVTPELFAT-YPTARDLAAANPAQVEDIIHPLGFYRSKTQHLI 96
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++ G +P ++DEL +LPG+G K AN+V+ F++ G VDTHV R+ RL
Sbjct: 97 GLATALDERFGGVVPRTMDELTSLPGVGRKTANVVLG-NAFDIPGFPVDTHVMRVTGRLR 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + + P EEW ++ L+ FG+ C P C C +S+
Sbjct: 156 WRSD--WRSAHPDPVKIEKEITSCFPPEEWTNLSHRLILFGRATCHARTPDCANCPLSDT 213
Query: 208 CPSAFKESSTSSSK 221
CPS + S+SK
Sbjct: 214 CPSYAPPAGKSTSK 227
>gi|19703409|ref|NP_602971.1| endonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19713479|gb|AAL94270.1| Endonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 201
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 100/191 (52%), Gaps = 8/191 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + ++ ++T E + I++ I F+ KA N
Sbjct: 18 FELLVAVILSAQCTDKRVNIVTEEMFKH-VNTPEQFANMELEEIENYIKSTGFFRNKAKN 76
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV R+ N
Sbjct: 77 IKKCSEQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRLTNL 136
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 137 IGLVD-------SEDPVKIELELMKIVPKKSWIVFSHYLILHGRATCIARRPRCLECEIS 189
Query: 206 EYCPSAFKESS 216
+YC K+ S
Sbjct: 190 KYCNYGIKKLS 200
>gi|317482770|ref|ZP_07941782.1| endonuclease III [Bifidobacterium sp. 12_1_47BFAA]
gi|316915805|gb|EFV37215.1| endonuclease III [Bifidobacterium sp. 12_1_47BFAA]
Length = 217
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + A+ A ++D+I+P+ FY K ++
Sbjct: 27 LLIATVLSAQTTDKRVNTVTPELFAT-YPTARDLAAANPAQVEDIIHPLGFYRSKTQHLI 85
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++ G +P ++DEL +LPG+G K AN+V+ F++ G VDTHV R+ RL
Sbjct: 86 GLATALDERFGGVVPRTMDELTSLPGVGRKTANVVLG-NAFDIPGFPVDTHVMRVTGRLR 144
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + + P EEW ++ L+ FG+ C P C C +S+
Sbjct: 145 WRSD--WRSAHPDPVKIEKEITSCFPPEEWTNLSHRLILFGRATCHARTPDCANCPLSDT 202
Query: 208 CPSAFKESSTSSSK 221
CPS + S+SK
Sbjct: 203 CPSYAPPAGKSTSK 216
>gi|358466608|ref|ZP_09176414.1| hypothetical protein HMPREF9093_00886 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|357068912|gb|EHI78884.1| hypothetical protein HMPREF9093_00886 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 216
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + + ++T E + I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKE-VNTPEQFANMEIEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV RI N
Sbjct: 90 IKKCSQQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRITNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K+ P + + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 IGLV-------KSEDPIKIEQELMKIVPKKSWIVFSHYLILHGRATCIARRPQCENCEIS 202
Query: 206 EYC 208
E C
Sbjct: 203 ECC 205
>gi|442805631|ref|YP_007373780.1| endonuclease III [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442741481|gb|AGC69170.1| endonuclease III [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 212
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 99/181 (54%), Gaps = 9/181 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ L++ D+ + + L + TAE AD ++ I P FY KA N+K
Sbjct: 33 LLIATQLAAQCTDERVNIVTKELFKK-YKTAEDFANADLKALEQDIRPTGFYRNKARNIK 91
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ ++ + K++G++P S+++LL LPG+G K AN+++ +N+ GI VDTH R+ NR+G
Sbjct: 92 ECCRMIIEKFNGEVPDSMEKLLMLPGVGRKTANVILG-NIYNIPGIVVDTHAKRLSNRMG 150
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
K P + L + +P+E+W + + LV G+ +C +P C C++ Y
Sbjct: 151 LT-------KEEDPVKIEFDLMKIIPREKWSKFSNQLVFHGRAVCKARKPDCEACSIRPY 203
Query: 208 C 208
C
Sbjct: 204 C 204
>gi|331700212|ref|YP_004336451.1| endonuclease III [Pseudonocardia dioxanivorans CB1190]
gi|326954901|gb|AEA28598.1| endonuclease III [Pseudonocardia dioxanivorans CB1190]
Length = 299
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + ++V R TA +AD +++LI P FY
Sbjct: 82 PLELAVATVLSAQTTDVRVNEVTPALFARY-----RTALDYAQADRTELEELIRPTGFYR 136
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
K ++ + + + ++DG++P+ L++L+ LPGIG K AN+V+ F V GI VDTH
Sbjct: 137 NKTSSLIGLGQAVVDRFDGELPARLEDLVTLPGIGRKTANVVLG-NAFGVPGITVDTHFG 195
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW + P + A+ +PK +W ++ ++ G+ +C +P CG
Sbjct: 196 RLVRRWGWTDE-------EDPVKVEHAVGALVPKRDWTIVSHQVIFHGRRVCHARKPACG 248
Query: 201 MCTVSEYCPSAFKESSTSSSKS 222
+CT++ CP AF T K+
Sbjct: 249 VCTLAVDCP-AFGAGPTDPEKA 269
>gi|342732970|ref|YP_004771809.1| endonuclease III [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384456337|ref|YP_005668934.1| endonuclease III [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|417967782|ref|ZP_12608847.1| Endonuclease III [Candidatus Arthromitus sp. SFB-co]
gi|418015623|ref|ZP_12655188.1| endonuclease III [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418373221|ref|ZP_12965312.1| Endonuclease III [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330425|dbj|BAK57067.1| endonuclease III [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345505958|gb|EGX28252.1| endonuclease III [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984682|dbj|BAK80358.1| endonuclease III [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|380340820|gb|EIA29370.1| Endonuclease III [Candidatus Arthromitus sp. SFB-co]
gi|380341610|gb|EIA30084.1| Endonuclease III [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 209
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + + L + + K DE ++D I + Y K+ N
Sbjct: 29 FQLLIATVLSAQTTDKKVNEVTKNLFIEYPRLEDFL-KLDEKELQDKIKSIGLYRMKSKN 87
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + +I ++D ++P + DEL+ LPG+G K AN+V++ F VQ VD HV R+ NR
Sbjct: 88 IINLCRILEERFDSEVPRTRDELITLPGVGRKTANVVIS-NCFGVQAFAVDVHVFRVSNR 146
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G P +PE+T L + + + W + ++ G+ CT +P CG C +S
Sbjct: 147 IGIANSP-------TPEKTELDLMKNIDENLWTICHHTIIFHGRRCCTSRKPNCGECKIS 199
Query: 206 EYC 208
EYC
Sbjct: 200 EYC 202
>gi|21674527|ref|NP_662592.1| endonuclease III [Chlorobium tepidum TLS]
gi|21647720|gb|AAM72934.1| endonuclease III [Chlorobium tepidum TLS]
Length = 213
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ ++++ DK + L +L A ++ + D I+ +I P+ +Y K
Sbjct: 30 ESPFQLLVATIMAAQATDKKVN-ELTAVLFKAAPDAASMSRMDVEDIRTIIRPINYYNNK 88
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ +++ + ++ G++P+S + L +LPG+G K AN+V+ F + + VDTHVHR+
Sbjct: 89 AKNILAMSRRLVDEFGGEVPASREALESLPGVGRKTANVVLG-NAFGIPAMPVDTHVHRV 147
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NR+G KTS PE+T EAL + +P+E+ + + L+ G+ C +P C C
Sbjct: 148 SNRIGLC-------KTSKPEETEEALVKVIPEEKLIDFHHYLLLHGRYTCKAKKPECANC 200
Query: 203 TVSEYC 208
+ E C
Sbjct: 201 AIREIC 206
>gi|269793831|ref|YP_003313286.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Sanguibacter keddieii DSM 10542]
gi|269096016|gb|ACZ20452.1| DNA-(apurinic or apyrimidinic site) lyase /endonuclease III
[Sanguibacter keddieii DSM 10542]
Length = 238
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 105/210 (50%), Gaps = 14/210 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D + P +L++ +LS+ DK + L + A+A
Sbjct: 26 RLLADVYPDARCELDFTTP-----LELLVATVLSAQCTDKRVNQVTPALFER-FPDAQAY 79
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+AD ++D+I F+ KA ++ I + ++ G++P SLDEL+ALPG+G K AN+
Sbjct: 80 AEADPEVLEDMIRSTGFFRPKARSLAGIGAALVERHGGEVPGSLDELVALPGVGRKTANV 139
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTHV R+ R GW T + P + + + EW ++
Sbjct: 140 VLGDA-FGVPGITVDTHVGRLVRRWGWTT-------SEDPVVVEREIGALVERSEWTLLS 191
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
++ G+ +C RP CG C V+ CPSA
Sbjct: 192 HRVIFHGRRVCFARRPACGACPVAGLCPSA 221
>gi|399924921|ref|ZP_10782279.1| endonuclease III [Peptoniphilus rhinitidis 1-13]
Length = 214
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS+ D + + + ++ + E T+++LI Y KA N
Sbjct: 34 FELLVSTILSAQCTDVRVNKVTNEIFKKYNKPSDFANMNIE-TLENLIRECGLYRNKAKN 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K +K+ + +++G +P ++ EL+ LPG+G K AN+V + F V I VDTHV R+ NR
Sbjct: 93 IKASSKVIIEEFNGQVPKTIKELMTLPGVGKKTANVVASTA-FGVPAIAVDTHVFRVTNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V++ E T +ALQ + K W + + L + G+ CT P C MC+++
Sbjct: 152 IGFVSEKNV-------ENTEKALQNKIDKNRWTKAHHLFIFHGRRCCTARNPNCEMCSIN 204
Query: 206 EYC 208
+ C
Sbjct: 205 KIC 207
>gi|325964631|ref|YP_004242537.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470718|gb|ADX74403.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Arthrobacter phenanthrenivorans Sphe3]
Length = 273
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 107/199 (53%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + + L Q A+++ +AD ++ ++ P F+ KA N
Sbjct: 49 FELLVATVLSAQTTDVTVNQVTKVLFQR-YPDAKSLAEADPGELEAILKPTGFFRAKARN 107
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + + ++G +P L++L+ LPG+G K AN+V+ G F + GI VDTH R+ NR
Sbjct: 108 VIALCTRLVDDFNGVVPGRLEDLVTLPGVGRKTANVVLGNG-FGIPGISVDTHFARLANR 166
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW +++ P Q + + +++W ++ ++ G+ +C +P CG C V+
Sbjct: 167 FGWT-------QSNDPVQIEQDVAELFERKDWTMLSHRVIFHGRRVCHARKPACGACPVA 219
Query: 206 EYCPSAFKESSTSSSKSKK 224
+CPS + T +K+ K
Sbjct: 220 SWCPS-YGMGETDPAKAAK 237
>gi|379734022|ref|YP_005327527.1| Endonuclease III [Blastococcus saxobsidens DD2]
gi|378781828|emb|CCG01479.1| Endonuclease III [Blastococcus saxobsidens DD2]
Length = 266
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK+ + L A A+ AD ++ ++ P F+ KA +
Sbjct: 67 FELLVATVLSAQTTDKMVNKVTPTLFAR-YPDAVALAGADRGELETILKPTGFFRAKANS 125
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++++ + ++DG++P + EL+ LPG+G K AN+V+ F V G+ VDTH R+ R
Sbjct: 126 VLGLSQVLVERFDGEVPRRMAELVTLPGVGRKTANVVLG-NAFGVPGLTVDTHFGRLVRR 184
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW + P + + R +PK EW + ++ G+ +C + CG C ++
Sbjct: 185 FGWTAE-------EDPVKVEAEVARLVPKREWTDFSHRVIFHGRRVCHAKKAACGACGLA 237
Query: 206 EYCPS 210
++CPS
Sbjct: 238 QWCPS 242
>gi|284989118|ref|YP_003407672.1| endonuclease III [Geodermatophilus obscurus DSM 43160]
gi|284062363|gb|ADB73301.1| endonuclease III [Geodermatophilus obscurus DSM 43160]
Length = 276
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L A+A+ AD A +++++ P F+ KA +
Sbjct: 77 FELLVATVLSAQTTDKTVNRVTPVLFAK-YPDAQALAGADRAELEEVLKPTGFFRAKANS 135
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A+ L ++DG++P + +L+ LPG+G K AN+V+ F+V G+ VDTH R+ R
Sbjct: 136 VLGLAQALLERFDGEVPGRMADLVTLPGVGRKTANVVLG-NAFDVPGLTVDTHFGRLVRR 194
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW + P + + +PK EW + ++ G+ +C + CG C ++
Sbjct: 195 FGWTAE-------EDPVRVEAEVAELIPKREWTMFSHRVIFHGRRVCHAKKAACGACGLA 247
Query: 206 EYCPS 210
+CPS
Sbjct: 248 RWCPS 252
>gi|284039058|ref|YP_003388988.1| DNA-(apurinic or apyrimidinic site) lyase [Spirosoma linguale DSM
74]
gi|283818351|gb|ADB40189.1| DNA-(apurinic or apyrimidinic site) lyase [Spirosoma linguale DSM
74]
Length = 220
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+S ++S T D+ RL + T E + D A + +L+Y + +KA
Sbjct: 38 FEQLISCIISIRTLDETTIPVSLRLFERA-RTPEQLLTLDVAALTELLYGTTYPDQKAYT 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
M IA + +++G++P+ L +L G+GPK AN+ + + I VD HVHR+ NR
Sbjct: 97 MLGIAGRIVNEFNGELPADYATLTSLKGVGPKCANLALGVA-TGQAAISVDVHVHRVVNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T PEQT + L+ +P E+WV IN LL+ FG+ ICT P C C V
Sbjct: 156 WGYV-------HTKQPEQTLKVLETQVPHEQWVDINRLLMPFGKHICTGTLPHCSTCPVL 208
Query: 206 EYC 208
+C
Sbjct: 209 PWC 211
>gi|390961830|ref|YP_006425664.1| hypothetical protein CL1_1673 [Thermococcus sp. CL1]
gi|390520138|gb|AFL95870.1| hypothetical protein CL1_1673 [Thermococcus sp. CL1]
Length = 238
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 7/136 (5%)
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
V + K + K ++I L +Y G +P + EL+ LPGIG K AN+V+ G F Q I V
Sbjct: 100 VGLWKTKGEWIVKASRIILEEYGGKVPDDIHELMKLPGIGRKCANIVLAYG-FGKQAIPV 158
Query: 136 DTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPL 195
DTHV+RI RLG + P PE+ E L+ +P+E+W+ +N +V G+ IC P+
Sbjct: 159 DTHVNRISKRLG-LAPP-----RVPPEKVEEYLRELIPREKWIYVNHAMVDHGKNICNPI 212
Query: 196 RPRCGMCTVSEYCPSA 211
RP+CG C + E CP A
Sbjct: 213 RPKCGECPLKELCPYA 228
>gi|441149052|ref|ZP_20965089.1| endonuclease III [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440619637|gb|ELQ82680.1| endonuclease III [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 248
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L T E + A+ +++LI P F+ KA +
Sbjct: 29 FELLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDMAAAEPERLEELIRPTGFFRAKAKS 87
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ ++DG++P L++L+ LPG+G K AN+V+ F V GI VDTH R+ R
Sbjct: 88 LLGLSTALRDRFDGEVPGRLEDLVTLPGVGRKTANVVLG-NAFGVPGITVDTHFGRLVRR 146
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
W Q PE+ + PK EW ++ +V G+ +C +P CG C ++
Sbjct: 147 FRWTEQ-------QDPEKVEAEIAEIFPKSEWTMLSHRVVFHGRRVCHSRKPACGACPIA 199
Query: 206 EYCPSAFKESSTSSSKSKK 224
CPS + E K+KK
Sbjct: 200 HDCPS-YGEGELDPEKAKK 217
>gi|339008005|ref|ZP_08640579.1| putative endonuclease III [Brevibacillus laterosporus LMG 15441]
gi|338775208|gb|EGP34737.1| putative endonuclease III [Brevibacillus laterosporus LMG 15441]
Length = 221
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 99/185 (53%), Gaps = 8/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F + ++ LLS+ DK + + L Q T E K ++D I + Y KA +
Sbjct: 30 FELTIAVLLSAQCTDKKVNQVTEHLFQK-YKTPEDYLKVSLEELQDDIRQIGLYKNKAKH 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ + ++ L +Y G++P+ +EL+ LPG+G K AN+V+++ F V I VDTHV RI R
Sbjct: 89 IQSLCRLLLEEYGGEVPNKHEELVKLPGVGRKTANVVVSVA-FGVPAIAVDTHVERISKR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ T P Q E L + +PK++W + ++ FG+ C P+C +C +
Sbjct: 148 LGFCPDDAT------PVQVEEILMKKIPKKDWSDTHHRMIFFGRYHCKAQSPQCDICPLE 201
Query: 206 EYCPS 210
+ CP+
Sbjct: 202 DVCPT 206
>gi|406574640|ref|ZP_11050366.1| DNA-(apurinic or apyrimidinic site) lyase [Janibacter hoylei
PVAS-1]
gi|404555941|gb|EKA61417.1| DNA-(apurinic or apyrimidinic site) lyase [Janibacter hoylei
PVAS-1]
Length = 243
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+TL+ Y E D P +L++ +LS+ T D + L TA A+
Sbjct: 21 RTLQERYPYAHCELDFDTP-----LQLLVATVLSAQTTDVTVNKVTPTLFAR-WPTAAAL 74
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD +++++ P F+ K ++ K+ + ++DG++P + +L+ LPG+G K AN+
Sbjct: 75 ADADRTEMEEVLRPTGFFRAKTNSVIKLGAALVERHDGEVPPRMADLVKLPGVGRKTANV 134
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F + GI VDTH R+ R+GW + P + A+ +P+++W ++
Sbjct: 135 VLG-NAFGIPGITVDTHFGRLVRRMGWTAE-------EDPVKVEHAVGELIPRKDWTMLS 186
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
+++ G+ C RP CG C V+ +CPS
Sbjct: 187 HVIIFHGRRTCHARRPACGACPVARWCPS 215
>gi|299144525|ref|ZP_07037604.1| endonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517613|gb|EFI41353.1| endonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 214
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+S +LS+ D V ++ R + +T + I+++I P FY KA N
Sbjct: 34 FELLVSTILSAQCTD-VRVNSVTRDMYKKYNTPLDFIELGIFGIEEIIKPCGFYRNKAKN 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +K + ++DG +P +++EL++LPG+G K AN+V + F V I VDTHV R+ NR
Sbjct: 93 ILMTSKKIVEEFDGQVPKTIEELMSLPGVGKKTANVVAS-TCFGVPAIAVDTHVFRLANR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V + +T +ALQ+ + K W R + LL+ G+ IC P C C +S
Sbjct: 152 IGFVDEKDVL-------ETEKALQKKIEKNRWTRAHHLLIFHGRRICKARNPICEECKIS 204
Query: 206 EYC 208
YC
Sbjct: 205 SYC 207
>gi|158337187|ref|YP_001518362.1| endonuclease III [Acaryochloris marina MBIC11017]
gi|158307428|gb|ABW29045.1| endonuclease III [Acaryochloris marina MBIC11017]
Length = 224
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 8/196 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + L + A A +AD ++ LI FY KA +++
Sbjct: 37 LLVATILSAQCTDERVNQVTPALFE-AYPDALAFAEADRDALETLIRSTGFYRNKAKHIQ 95
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ + +DG +P+ +D LL LPG+ K AN+V+ G+ G+ VDTHV R+ NRLG
Sbjct: 96 GACQKIVRDFDGQVPNQMDLLLTLPGVARKTANVVLAHGYGINMGVTVDTHVKRLSNRLG 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ P + + L + LP+E+W + L+ G+ +C+ +P C C++++
Sbjct: 156 LT-------RHQDPVKIEQDLMKLLPQEDWENWSIRLIYHGRAVCSARKPTCDRCSLTDL 208
Query: 208 CPSAFKESSTSSSKSK 223
CPSA K + S+KS+
Sbjct: 209 CPSAGKVTPARSAKSQ 224
>gi|78043065|ref|YP_359967.1| endonuclease III [Carboxydothermus hydrogenoformans Z-2901]
gi|77995180|gb|ABB14079.1| endonuclease III [Carboxydothermus hydrogenoformans Z-2901]
Length = 210
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 13/185 (7%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKAD--EATIKDLIYPVAFYTRKA 83
F +L++ +LS+ + D+ + ++L L E D D E + I + Y KA
Sbjct: 30 FQLLVAVVLSAQSTDRQVNKVTEKLF---LFVKEPRDLLDMGEEELSRQIRSLGLYRNKA 86
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
N+ KIA+I +Y G +P S ELL LPG+GPK A +++ +G FN VDTHV R+
Sbjct: 87 RNLIKIAEILDREYHGQVPDSFAELLKLPGVGPKTAEVIVGVG-FNKPSFPVDTHVFRVA 145
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG K +PE L++ P W+ ++ L+ FG+ IC +P C +C
Sbjct: 146 RRLGL-------SKARTPEGVSFDLKKIFPPNSWIDLHHRLIFFGRRICKAQKPSCNICP 198
Query: 204 VSEYC 208
E+C
Sbjct: 199 FPEFC 203
>gi|313127105|ref|YP_004037375.1| endonuclease iii; DNA-(apurinic or apyrimidinic site) lyase
[Halogeometricum borinquense DSM 11551]
gi|448288427|ref|ZP_21479626.1| DNA-(apurinic or apyrimidinic site) lyase [Halogeometricum
borinquense DSM 11551]
gi|312293470|gb|ADQ67930.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Halogeometricum borinquense DSM 11551]
gi|445569578|gb|ELY24150.1| DNA-(apurinic or apyrimidinic site) lyase [Halogeometricum
borinquense DSM 11551]
Length = 227
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 8/187 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + L + T E AD + D IY + F+ KA
Sbjct: 35 RLELLIAVVLSAQCTDERVNEVTAELFEK-YQTPEDYAAADVEELADDIYGITFHNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
++ I + + ++DG++P ++ EL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YLQSIGETLVEEHDGEVPDTMSELTDLSGVGRKTANVVLQHGHDVVEGIVVDTHVRRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE+ + L +P+ +W + L + G+ +C P C C +
Sbjct: 154 RLGITEE-------ERPEKIEQDLMPVVPEADWQQFTHLFISHGRAVCDARNPDCDECVL 206
Query: 205 SEYCPSA 211
+ CPS+
Sbjct: 207 EDLCPSS 213
>gi|409095774|ref|ZP_11215798.1| endonuclease III [Thermococcus zilligii AN1]
Length = 242
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 104/190 (54%), Gaps = 14/190 (7%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQ--NGLHTAEA--IDKADEATIKDLIYPVAFYTR 81
+ L+ ++S +D+V + L + + T A I++ E K V +
Sbjct: 41 YRTLIHCIISQRMRDEVTYKVWEELFRKYGDIETIAATPIEEMQEFLRKQ---GVGLWKT 97
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
K + + ++I L KY+G +P ++EL+ LPGIG K AN+V+ G F Q I VDTHV+R
Sbjct: 98 KGEWIVRASQILLEKYNGKVPEDINELMKLPGIGRKCANIVLAYG-FGKQAIPVDTHVNR 156
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I RLG + PG +PE+ E L +P+++W+ +N +V G++IC P++P+C
Sbjct: 157 ISKRLG-LAPPGV-----APEKVEEYLAGLIPEDKWIYVNHAMVDHGRSICRPIKPKCDE 210
Query: 202 CTVSEYCPSA 211
C + E CP A
Sbjct: 211 CPLRELCPYA 220
>gi|302544225|ref|ZP_07296567.1| endonuclease III [Streptomyces hygroscopicus ATCC 53653]
gi|302461843|gb|EFL24936.1| endonuclease III [Streptomyces himastatinicus ATCC 53653]
Length = 266
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L T E +
Sbjct: 27 RELADVYPYAHPELDFENP-----FQLLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDM 80
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD ++ LI P F+ KA ++ ++ ++DG++P L +L+ LPG+G K AN+
Sbjct: 81 AAADPEALEQLIRPTGFFRAKAKSLLGLSAALRDRFDGEVPGRLKDLVTLPGVGRKTANV 140
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V G+ VDTH R+ R W Q PE+ + PK EW ++
Sbjct: 141 VLG-NAFGVPGLTVDTHFGRLVRRWKWTDQ-------EDPEKVEAEIAALFPKSEWTMLS 192
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
++ G+ +C +P CG C ++ CP A+ E K+KK
Sbjct: 193 HRIIFHGRRVCHARKPACGACPIAPLCP-AYGEGEIDPDKAKK 234
>gi|374988578|ref|YP_004964073.1| putative endonuclease III [Streptomyces bingchenggensis BCW-1]
gi|297159230|gb|ADI08942.1| putative endonuclease III [Streptomyces bingchenggensis BCW-1]
Length = 376
Score = 109 bits (273), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 10/202 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ T D + L T E + AD ++ LI P F+ K
Sbjct: 129 ENPFQLLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDMAAADPEALEQLIRPTGFFRAK 187
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A ++ ++ ++ G++P L++L+ LPG+G K AN+V+ F V G+ VDTH R+
Sbjct: 188 AKSLLGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANVVLG-NAFGVPGLTVDTHFGRL 246
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
R W Q PE+ + PK EW ++ ++ G+ +C +P CG C
Sbjct: 247 VRRWKWTGQ-------EDPEKVEAEIAALFPKSEWTMLSHRIIFHGRRVCHARKPACGAC 299
Query: 203 TVSEYCPSAFKESSTSSSKSKK 224
++ CPS + E T K+KK
Sbjct: 300 PIAPLCPS-YGEGETDPDKAKK 320
>gi|402311856|ref|ZP_10830787.1| endonuclease III [Lachnospiraceae bacterium ICM7]
gi|400371003|gb|EJP23982.1| endonuclease III [Lachnospiraceae bacterium ICM7]
Length = 209
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 100/191 (52%), Gaps = 13/191 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + FA +LSA + + V R L + E AD + ++ I+ + FY
Sbjct: 30 PWQLLFATILSAQCTDARVNMVT-----RDLYKKYDSLEKFADADLSEMEKDIHSIGFYH 84
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N+ A+ LT + G++PS+LD+LL LPG+G K AN++ F++ I VDTHV
Sbjct: 85 NKAKNLIACARKLLTDFGGEVPSNLDDLLTLPGVGRKTANVIRG-NIFDLPSIVVDTHVK 143
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI +LG+ ++ P + L LPK+ W+ N L+ G+TIC R +C
Sbjct: 144 RITKKLGFT-------ESDDPVKIEFELMEILPKDHWIVWNTDLITLGRTICIARREKCD 196
Query: 201 MCTVSEYCPSA 211
+C + + CPSA
Sbjct: 197 ICFLRDDCPSA 207
>gi|440783410|ref|ZP_20961128.1| endonuclease III [Clostridium pasteurianum DSM 525]
gi|440219550|gb|ELP58762.1| endonuclease III [Clostridium pasteurianum DSM 525]
Length = 212
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ D + ++L +T E + + + ++++I P FY K+ N
Sbjct: 30 YELLIATILSAQCTDVRVNIVTEKLFS-KYNTPEKMVELTDTELQEIIKPCGFYKNKSKN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ L Y+ +P +++EL LPG+G K AN+VM+ FN+ I VDTHV R+ R
Sbjct: 89 ILATSRELLFNYNSQVPKTMEELTKLPGVGRKTANVVMS-NAFNIPAIAVDTHVFRVSKR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+ + +P + + L++ +PK W + L+ G+ IC +P+C +C +S
Sbjct: 148 IGFAS-------GDNPLEVEQELRKVIPKNMWSNAHHYLIWHGRKICKARKPQCEICPIS 200
Query: 206 EYCPSAFKES 215
EYC + +KE+
Sbjct: 201 EYC-NYYKEN 209
>gi|424867241|ref|ZP_18291049.1| Endonuclease III/Nth [Leptospirillum sp. Group II 'C75']
gi|124515301|gb|EAY56811.1| Endonuclease III/Nth [Leptospirillum rubarum]
gi|387222276|gb|EIJ76734.1| Endonuclease III/Nth [Leptospirillum sp. Group II 'C75']
Length = 241
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 109/196 (55%), Gaps = 14/196 (7%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + D++ + L ++ +AD T++ LI F+ RKA
Sbjct: 55 FELLVATVLSAQSTDRMVNSVTPALFAR-FPDPPSLQEADPETVEGLIRSTGFFHRKALQ 113
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AK + +Y G++PS +++LL LPG+G K A++++ G F++ I VDTHV R+ R
Sbjct: 114 IVRLAKELVRRYQGEVPSRMEDLLTLPGVGRKTASVILAHG-FHLPAIPVDTHVTRVSLR 172
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ + PE E L+R + +++W+ + L+ G+ +C +P C C +S
Sbjct: 173 LGFTV-------SHDPEVIEEDLKRLMDEKDWISGSSRLLLHGRYVCLARKPLCSNCVLS 225
Query: 206 EYCPS-----AFKESS 216
CPS A ++SS
Sbjct: 226 GVCPSRSSGGALRDSS 241
>gi|403717274|ref|ZP_10942592.1| endonuclease III [Kineosphaera limosa NBRC 100340]
gi|403209249|dbj|GAB97275.1| endonuclease III [Kineosphaera limosa NBRC 100340]
Length = 234
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L A A+ +AD ++ +I P + KA +
Sbjct: 22 FQLLVATVLSAQTTDVSVNSVTPALFAR-YPDALALAEADREQVEQIIRPTGIFRAKAES 80
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K+A + ++DG +P + +L+ LPG+G K AN+V+ F V GI VDTHV R+ R
Sbjct: 81 ITKLAGQLVQRFDGQVPGRMRDLVTLPGVGRKTANVVLG-NAFGVPGITVDTHVGRLVRR 139
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW + + P + A+ L + +W + + +L+ G+ C RP CG C V+
Sbjct: 140 FGWTEE-------TDPVKVEHAIGELLVRRDWTQASHVLIFHGRRTCHAKRPACGACPVA 192
Query: 206 EYCPS 210
++CPS
Sbjct: 193 KWCPS 197
>gi|444919356|ref|ZP_21239391.1| Endonuclease III [Cystobacter fuscus DSM 2262]
gi|444708665|gb|ELW49713.1| Endonuclease III [Cystobacter fuscus DSM 2262]
Length = 219
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 100/184 (54%), Gaps = 7/184 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +L++ D+ + L Q A+ A+ A +++ + P FY +K
Sbjct: 34 YELLVATVLAAQCTDERVNRVTATLFQKYPGGPRALADAEPAELEEDLRPTGFYKQKTKA 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++ L + G++P SL++L LPG+ K AN+V+ + GI VDTHV R+ R
Sbjct: 94 VQALSRALLMDFGGEVPHSLEQLTTLPGVARKTANVVLNTAFNLPSGIIVDTHVVRVSQR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG TK+K PE+ + L + +PKEEW + P V G+ C +P+C C ++
Sbjct: 154 LGL-----TKKK--KPEEIEQELMKLVPKEEWTFLGPATVLHGRYTCMARKPKCDACPLA 206
Query: 206 EYCP 209
++CP
Sbjct: 207 DFCP 210
>gi|347542986|ref|YP_004857623.1| endonuclease III [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986022|dbj|BAK81697.1| endonuclease III [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 209
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 15/207 (7%)
Query: 8 YSLGVDETDSSLPPK------ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ + VD+ S P E F +L++ +LS+ T DK + L + +
Sbjct: 5 FKIIVDKLIESYPDAKCELEYESPFQLLIATVLSAQTTDKKVNEVTNSLFSEYPKLEDFL 64
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+ DE +KD I + Y K+ N+ + KI +++G++P + DEL+ LPG+G K AN+
Sbjct: 65 N-LDEEKLKDKIKCIGLYRTKSKNIINLCKILKEEFNGEVPKTRDELITLPGVGRKTANV 123
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V++ F VQ VD HV R+ NR+G + +PEQT L + + + W +
Sbjct: 124 VIS-NCFGVQAFAVDVHVFRVSNRIGIAN-------SKTPEQTELELMKNIDESLWTICH 175
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYC 208
++ G+ CT +P CG C + EYC
Sbjct: 176 HTIIFHGRRCCTSRKPNCGECKIKEYC 202
>gi|124485824|ref|YP_001030440.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Methanocorpusculum labreanum Z]
gi|124363365|gb|ABN07173.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Methanocorpusculum labreanum Z]
Length = 216
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +LS+ T D +G L+ L + A+ +AD ++ +I+ FY KA N
Sbjct: 33 FELLIMTILSAQTTDVTING-LRDELFSAYPNPAALARADPLDVERIIHSAGFYHSKAKN 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ AK+ + G +P +++EL LPG+G K AN+V + GI VDTHV R+ +
Sbjct: 92 IIGTAKMLEENFGGVVPRTIEELTTLPGVGRKTANIVTNHAFHEACGIAVDTHVRRLSKK 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+ + + PE+ + L + P++ W +IN LL+ G+ +CT +P C C +
Sbjct: 152 IGFT-------QNTDPEKIEKDLMKLFPEKWWSKINYLLIRHGRAVCTAKKPDCMKCIIR 204
Query: 206 EYCPS 210
C S
Sbjct: 205 HNCQS 209
>gi|119714606|ref|YP_921571.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Nocardioides sp. JS614]
gi|119535267|gb|ABL79884.1| endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
[Nocardioides sp. JS614]
Length = 243
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +LS+ T DK + A++ L A + AD AT++ ++ P+ F+ K +
Sbjct: 47 FELLVVTVLSAQTTDKRVN-AVRPTLFAAYPDARTMAGADRATLEGIVGPLGFFRAKTES 105
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K++ + ++ G++P LD+L+ LPG+G K AN+V+ F + GI VDTH R+ R
Sbjct: 106 LLKLSAALVERHGGEVPPRLDDLVQLPGVGRKTANVVLG-NAFGIPGITVDTHFGRLSRR 164
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
W + + P + A+ K +W ++ L+ G+ IC P CG C V+
Sbjct: 165 FAWTEE-------TDPVKVEHAVGALFEKRDWTMLSHHLIWHGRRICHARNPACGACPVA 217
Query: 206 EYCPSAFKESSTSSSKSKK 224
+CP A+ E T + + K
Sbjct: 218 RWCP-AYGEGPTDPAAAAK 235
>gi|345303360|ref|YP_004825262.1| endonuclease III [Rhodothermus marinus SG0.5JP17-172]
gi|345112593|gb|AEN73425.1| endonuclease III [Rhodothermus marinus SG0.5JP17-172]
Length = 217
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 102/184 (55%), Gaps = 8/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L+ +LS+ T DK + L + T EA+ +A+ ++ L+ P+ ++ +KA
Sbjct: 34 FELLIVTVLSAQTTDKKVNEVSPELFRR-YPTPEALAQANPEELEPLLRPLGYFRQKART 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + ++ G++P S++EL ALPG+G K A +V+ + +GI VDTHV R+ R
Sbjct: 93 IVNLACQLVERHGGEVPRSMEELTALPGVGRKTAAIVLGTAFGIREGIAVDTHVSRVSQR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG T KT P++ + L +P+E+W LV G+ +C RPRC C ++
Sbjct: 153 LGL-----TSHKT--PDKIEQDLMALVPREDWTWFGHALVLHGRYVCLARRPRCSQCVLA 205
Query: 206 EYCP 209
+ CP
Sbjct: 206 DLCP 209
>gi|385680621|ref|ZP_10054549.1| endonuclease III [Amycolatopsis sp. ATCC 39116]
Length = 227
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E AV+LSA + + ++V R TA AD +++LI P F+
Sbjct: 21 PLELLIAVVLSAQTTDVRVNEVTPALFARY-----RTAADYAGADRTELEELIRPTGFFR 75
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + ++DG++P L++L+ LPG+G K AN+V+ F+V GI VDTH
Sbjct: 76 AKANSLMGLGAALVERFDGEVPGKLEDLVTLPGVGRKTANVVLG-NAFDVPGITVDTHFG 134
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW + P + A+ +P++EW ++ ++ G+ +C +P CG
Sbjct: 135 RLVRRWGWTAE-------EDPVKVEHAIGELIPRKEWTMLSHRVIFHGRRVCHARKPACG 187
Query: 201 MCTVSEYCPS 210
C ++ CPS
Sbjct: 188 ACPLARDCPS 197
>gi|337286318|ref|YP_004625791.1| endonuclease III [Thermodesulfatator indicus DSM 15286]
gi|335359146|gb|AEH44827.1| endonuclease III [Thermodesulfatator indicus DSM 15286]
Length = 224
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 103/183 (56%), Gaps = 8/183 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + L + +A+ +A + + I FY +KA +K
Sbjct: 46 LLVATILSAQCTDERVNQVTAELFKK-YRSAKDYAEAPLEELAEDIRSTGFYQQKAKYIK 104
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ A++ + K+ G++P S++++L LPG+ K AN+V++ + V+GI VDTHV R+ RLG
Sbjct: 105 ECARLIIEKFGGEVPRSMEDMLKLPGVARKTANIVLSNAYGVVEGIPVDTHVRRLAQRLG 164
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ TK+K P++ + L +P+EEW +I + G+ IC +P C C V +
Sbjct: 165 F-----TKEK--KPDKIEQDLMAIIPREEWGQIAYVFQAHGRKICKARKPLCDQCVVKDL 217
Query: 208 CPS 210
CPS
Sbjct: 218 CPS 220
>gi|284028446|ref|YP_003378377.1| endonuclease III [Kribbella flavida DSM 17836]
gi|283807739|gb|ADB29578.1| endonuclease III [Kribbella flavida DSM 17836]
Length = 262
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + +T +KV + TA+A +AD ++ ++ P F+
Sbjct: 67 PLELLVATILSAQTTDVTVNKVTPTLFAKY-----PTAQAYAEADRDEMEAILKPTGFFR 121
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
K ++ K+ + + +YDG +P L+EL+ LPG G K AN+V+ F + GI VDTH
Sbjct: 122 AKTNSLLKLGQALVDEYDGQVPGKLEELVKLPGTGRKTANVVLG-NAFGIPGITVDTHFG 180
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW T+ P + + PK++W ++ L+ G+ C +P CG
Sbjct: 181 RLVRRFGWTTE-------EDPVKVEHLIGALFPKKDWTMLSHRLIFHGRRRCHAKKPACG 233
Query: 201 MCTVSEYCPS 210
C ++++CPS
Sbjct: 234 ACPLAQWCPS 243
>gi|410479403|ref|YP_006767040.1| EndoIII-related endonuclease [Leptospirillum ferriphilum ML-04]
gi|406774655|gb|AFS54080.1| putative EndoIII-related endonuclease [Leptospirillum ferriphilum
ML-04]
Length = 211
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 109/196 (55%), Gaps = 14/196 (7%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + D++ + L ++ +AD T++ LI F+ RKA
Sbjct: 25 FELLVATVLSAQSTDRMVNSVTPALFAR-FPDPPSLQEADPETVEGLIRSTGFFHRKALQ 83
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AK + +Y G++PS +++LL LPG+G K A++++ G F++ I VDTHV R+ R
Sbjct: 84 IVRLAKELVRRYQGEVPSRMEDLLTLPGVGRKTASVILAHG-FHLPAIPVDTHVTRVSLR 142
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ + PE E L+R + +++W+ + L+ G+ +C +P C C +S
Sbjct: 143 LGFTV-------SHDPEVIEEDLKRLMDEKDWISGSSRLLLHGRYVCLARKPLCSNCVLS 195
Query: 206 EYCPS-----AFKESS 216
CPS A ++SS
Sbjct: 196 GVCPSRSSGGALRDSS 211
>gi|404482921|ref|ZP_11018146.1| endonuclease III [Clostridiales bacterium OBRC5-5]
gi|404344011|gb|EJZ70370.1| endonuclease III [Clostridiales bacterium OBRC5-5]
Length = 209
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + FA +LSA + + V R L + E AD + ++ I+ + FY
Sbjct: 30 PWQLLFATILSAQCTDARVNMVT-----RDLYKKYDSLEKFADADLSEMEKDIHSIGFYH 84
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N+ A+ LT + G++PS LD+LL LPG+G K AN++ F++ I VDTHV
Sbjct: 85 NKAKNLIACARKLLTDFGGEVPSDLDDLLTLPGVGRKTANVIRG-NIFDLPSIVVDTHVK 143
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI +LG+ ++ P + L LPK+ W+ N L+ G+TIC R +C
Sbjct: 144 RITKKLGFT-------ESDDPVKIEFELMEILPKDHWIVWNTDLITLGRTICIARREKCD 196
Query: 201 MCTVSEYCPSA 211
+C + + CPSA
Sbjct: 197 ICFLRDDCPSA 207
>gi|405363125|ref|ZP_11026123.1| Endonuclease III [Chondromyces apiculatus DSM 436]
gi|397090068|gb|EJJ20954.1| Endonuclease III [Myxococcus sp. (contaminant ex DSM 436)]
Length = 227
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T+D+V+ LLQ T +A+ I LI PV F+ KA
Sbjct: 45 FEQLVACILSIRTRDEVSLPVSLALLQRA-STPQALASLTPEAIDALIQPVTFHEAKAWQ 103
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IA + G +P L + G+GPK A++ + + + + I VD HVHR+ NR
Sbjct: 104 LHAIAVRTRDAFGGTLPCDAQVLQSFKGVGPKCAHLALGIACGH-EAISVDIHVHRVTNR 162
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V + +PE T EAL+ LP+ WV +N LLV FG+ ICT RP+C C V
Sbjct: 163 WGYV-------QARTPEATMEALEAQLPRAWWVELNRLLVPFGKHICTGTRPKCSTCPVL 215
Query: 206 EYC 208
+ C
Sbjct: 216 DAC 218
>gi|373457007|ref|ZP_09548774.1| endonuclease III [Caldithrix abyssi DSM 13497]
gi|371718671|gb|EHO40442.1| endonuclease III [Caldithrix abyssi DSM 13497]
Length = 231
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 14/208 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K LE Y+ G + P F +L+S +L++ + DK + ++L ++ A +
Sbjct: 20 LKILEETYN-GAETALKYKTP----FQLLISTMLAAQSTDKRVNIVTEKLFKD-YPDAAS 73
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ + E I++ I V Y KA N+ +++I KY GDIP++ +EL+ALPG+G K AN
Sbjct: 74 MRRMSEEQIREYIKTVGLYKAKAKNILNVSEILDEKYGGDIPATREELMALPGVGRKTAN 133
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+++ NV I VDTHV R+ NR+G + T + L +PKE+W +
Sbjct: 134 VVLSIA-KNVPAIAVDTHVFRVSNRIGLA-------RAKDVLNTEKQLMESIPKEKWSQA 185
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYC 208
+ L+ G+ IC P C C ++ C
Sbjct: 186 HHWLIWHGRKICRARNPLCTECPLNRIC 213
>gi|406970685|gb|EKD94978.1| Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase)
[uncultured bacterium]
Length = 211
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 8/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ + +S +LS+ T DK + L EA+ AD + LI V F+ KA
Sbjct: 31 YQLAISVMLSAQTTDKKVNQVTPALFAK-YPNWEALASADTGEVAVLIRQVNFHKGKAER 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
A+ L+ Y+G +P + +L+ LPG+ K AN++M W +GI VDTHV R+ R
Sbjct: 90 SVAAARTVLSLYNGVLPHDMLQLMKLPGVARKSANVIMQELWGIAEGIVVDTHVSRVSAR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG +Q + P++ E L LPK+ W + V G+ IC +P+CG C ++
Sbjct: 150 LGLTSQ-------TEPKKIEEDLMSLLPKKYWRNFSGSAVLHGRYICIARKPKCGECVLN 202
Query: 206 EYCPSAFK 213
+ CPSA+K
Sbjct: 203 KICPSAYK 210
>gi|419851082|ref|ZP_14374041.1| endonuclease III [Bifidobacterium longum subsp. longum 35B]
gi|419852670|ref|ZP_14375533.1| endonuclease III [Bifidobacterium longum subsp. longum 2-2B]
gi|386407322|gb|EIJ22301.1| endonuclease III [Bifidobacterium longum subsp. longum 35B]
gi|386410084|gb|EIJ24895.1| endonuclease III [Bifidobacterium longum subsp. longum 2-2B]
Length = 228
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 4/194 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + A+ A ++D+I+P+ FY K ++
Sbjct: 38 LLIATVLSAQTTDKRVNTVTPELFAI-YPTARDLAAANPAQVEDIIHPLGFYRSKTQHLI 96
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++ G +P ++DEL +LPG+G K AN+V+ F++ G VDTHV R+ RL
Sbjct: 97 GLATALDERFGGVVPRTMDELTSLPGVGRKTANVVLG-NAFDIPGFPVDTHVMRVTGRLR 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + + P EEW ++ L+ FG+ C P C C +S+
Sbjct: 156 WRSD--WRSAHPDPVKIEKEITSCFPPEEWTNLSHRLILFGRATCHARTPDCANCPLSDT 213
Query: 208 CPSAFKESSTSSSK 221
CPS + S+SK
Sbjct: 214 CPSYAPPAGKSTSK 227
>gi|116671918|ref|YP_832851.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Arthrobacter sp. FB24]
gi|116612027|gb|ABK04751.1| DNA-(apurinic or apyrimidinic site) lyase [Arthrobacter sp. FB24]
Length = 277
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L +Y E D P F +L++ +LS+ T D V + + LL A ++
Sbjct: 34 RALAELYPYAHAELDFRSP-----FELLVATVLSAQTTDVVVN-QVTPLLFARYPDARSM 87
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+AD A ++ ++ P F+ KA N+ + + +YDG++P L +L+ LPG+G K AN+
Sbjct: 88 AEADPAELEVILKPTGFFRAKARNVMALCNRLVDEYDGEVPPRLQDLVTLPGVGRKTANV 147
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F + GI VDTH R+ RLGW ++ P + + +W ++
Sbjct: 148 VLG-NAFGIPGITVDTHFGRLARRLGWT-------ESDDPVRVEADVAELFEPRDWTMLS 199
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+V G+ +C +P CG C V+ +CPS + T K++K
Sbjct: 200 HRVVFHGRRVCHARKPACGACAVATWCPS-YGAGETDPEKARK 241
>gi|406971853|gb|EKD95801.1| Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase),
partial [uncultured bacterium]
Length = 154
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
E KAD ++ I V F+ KA + AK+ LT++ G +P +L +L+ +PGI K
Sbjct: 6 EDFAKADLKELQSDIRGVNFHLGKAERIISAAKVILTQFGGSVPKTLADLIKIPGIARKS 65
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGW-VTQPGTKQKTSSPEQTREALQRWLPKEEW 177
AN++M W +GI VDTHV R+ NRLG + Q K + L LPKE W
Sbjct: 66 ANVIMQELWDVAEGIVVDTHVTRVSNRLGLTINQDAVK--------IEKDLTELLPKEYW 117
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
I+ LV G+ ICT +P+C C +++ CPSAFK
Sbjct: 118 RNISGALVLHGRYICTARKPKCSECVLNKICPSAFK 153
>gi|212224145|ref|YP_002307381.1| endonuclease III [Thermococcus onnurineus NA1]
gi|212009102|gb|ACJ16484.1| endonuclease III [Thermococcus onnurineus NA1]
Length = 243
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 10/188 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP--VAFYTRKA 83
+ L+ ++S +D+V ++L + E I + ++ + V + K
Sbjct: 49 YRTLIHCIISQRMRDEVTYKVWEKLFEK-YGDIETIARTPIEEMQTFLKENGVGLWKTKG 107
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ K ++I L +Y G +P + EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 108 EWIVKASQIILKEYGGKVPDDIHELMKLPGIGRKCANIVLAYG-FGRQAIPVDTHVNRIS 166
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P + PE+ + L+ +P+E+W+ +N +V G+TIC P++PRC C
Sbjct: 167 KRLG-LAPPRVQ-----PERVEDYLRELIPREKWIYVNHAMVDHGKTICRPIKPRCDECP 220
Query: 204 VSEYCPSA 211
+ E CP +
Sbjct: 221 LRELCPYS 228
>gi|448666799|ref|ZP_21685444.1| endonuclease III [Haloarcula amylolytica JCM 13557]
gi|445771930|gb|EMA22986.1| endonuclease III [Haloarcula amylolytica JCM 13557]
Length = 227
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 8/195 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + L + +AE +A E + + IY + F+ K
Sbjct: 34 NRLELLIAVVLSAQCTDERVNEVTADLFEK-YQSAEDYAEATEEQLAEDIYGITFHNNKG 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
++ I +I ++DG++P ++ L LPG+G K AN+V+ G V+GI VDTHV R+
Sbjct: 93 GYLQGIGEILTEEHDGEVPDTMSALTDLPGVGRKTANVVLQHGHDIVEGIVVDTHVQRLS 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + PE + L +P EW + LL+ G+ +C C C
Sbjct: 153 RRLGLTEE-------ERPEAIEQDLLDVVPSGEWQQFTHLLIDHGRAVCGARSADCEACV 205
Query: 204 VSEYCPSAFKESSTS 218
+++ CPSA +S
Sbjct: 206 LADICPSAKGDSDVD 220
>gi|345016220|ref|YP_004818574.1| endonuclease III [Streptomyces violaceusniger Tu 4113]
gi|344042569|gb|AEM88294.1| endonuclease III [Streptomyces violaceusniger Tu 4113]
Length = 289
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 105/223 (47%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L E +
Sbjct: 50 RELAEVYPYAHPELDFESP-----FQLLVATVLSAQTTDLRVNQTTPALFA-AYPAPEDM 103
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD ++ LI P F+ KA ++ ++ ++ G++P L++L+ LPG+G K AN+
Sbjct: 104 AAADPEALEQLIRPTGFFRAKAKSLLGLSAALRDRFGGEVPGRLEDLVTLPGVGRKTANV 163
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V G+ VDTH R+ R W Q PE+ + PK EW ++
Sbjct: 164 VLG-NAFGVPGLTVDTHFGRLVRRWKWTAQ-------EDPEKVEAEIAALFPKSEWTMLS 215
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
++ G+ +C +P CG C ++ CP A+ E T K+KK
Sbjct: 216 HRIIFHGRRVCHARKPACGACPIAPLCP-AYGEGETDPDKAKK 257
>gi|262067349|ref|ZP_06026961.1| endonuclease III [Fusobacterium periodonticum ATCC 33693]
gi|291378912|gb|EFE86430.1| endonuclease III [Fusobacterium periodonticum ATCC 33693]
Length = 216
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + + ++T E + I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKE-VNTPEQFANMEIEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV RI N
Sbjct: 90 IKKCSQQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRITNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K+ P + + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 IGLV-------KSEDPIKIEQELMKIVPKKSWIVFSHYLILHGRATCIARRPQCKNCEIS 202
Query: 206 EYC 208
+ C
Sbjct: 203 DCC 205
>gi|340754393|ref|ZP_08691148.1| endonuclease III [Fusobacterium sp. 2_1_31]
gi|422315374|ref|ZP_16396810.1| endonuclease III [Fusobacterium periodonticum D10]
gi|229423904|gb|EEO38951.1| endonuclease III [Fusobacterium sp. 2_1_31]
gi|404592517|gb|EKA94335.1| endonuclease III [Fusobacterium periodonticum D10]
Length = 216
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + + + + ++T E + I++ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDKRVNIVTEEMFKE-VNTPEQFANMEIEEIENYIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L KY+G+IP +D+L L G+G K AN+V W GI VDTHV RI N
Sbjct: 90 IKKCSQQLLEKYNGEIPQDMDKLTELAGVGRKTANVVRGEVWGLADGITVDTHVKRITNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K+ P + + L + +PK+ W+ + L+ G+ C RP+C C +S
Sbjct: 150 IGLV-------KSEDPIKIEQELMKIVPKKSWIVFSHYLILHGRATCIARRPQCKNCEIS 202
Query: 206 EYC 208
+ C
Sbjct: 203 DCC 205
>gi|415709635|ref|ZP_11463260.1| endonuclease III [Gardnerella vaginalis 6420B]
gi|388056307|gb|EIK79183.1| endonuclease III [Gardnerella vaginalis 6420B]
Length = 224
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L + A ++ A + ++ +IYP+ FY KA N
Sbjct: 43 FELLIATVLSAQTTDKRVNIVTPELF-SIFPNASSLAAAPVSQVESIIYPLGFYRVKAQN 101
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ L + G +PS++++L++LPG+G K AN+V+ F + G VDTHV R+ R
Sbjct: 102 IISLSACLLNNFSGIVPSNMEDLISLPGVGRKTANVVLG-NAFGLPGFPVDTHVIRVTGR 160
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW Q +P + + +EW ++ L+ G+ ICT P+C C ++
Sbjct: 161 LGW----RKVQNRPNPVAIEREITAYFAPKEWTNLSHRLILHGRKICTARNPKCVSCPLN 216
Query: 206 EYCPSAF 212
CPSA
Sbjct: 217 TTCPSAI 223
>gi|206895438|ref|YP_002247351.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
gi|206738055|gb|ACI17133.1| endonuclease III [Coprothermobacter proteolyticus DSM 5265]
Length = 209
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 11/182 (6%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
VLLS +LS+ TKD++ RL + T ++ +A +++++ PV FY +KA ++
Sbjct: 34 VLLSCILSARTKDEITYPTADRLF-SFYPTPLSLCQAHLTDLENILKPVGFYRQKAKYVR 92
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
A C + G +P + +L +PGIGPK A +V GW + I VD HV RI RLG
Sbjct: 93 DAA--CYIEKWG-VPKTTKQLTQVPGIGPKCAAIVRAFGW-GIPDIAVDAHVQRISKRLG 148
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + +T QT+ L+ LP EWV +N LLV G+ +C P RP C C ++
Sbjct: 149 WTEEKDDHLRT----QTK--LKTLLPIHEWVYVNHLLVSLGRHVCRPQRPLCHQCVLNSL 202
Query: 208 CP 209
CP
Sbjct: 203 CP 204
>gi|229817097|ref|ZP_04447379.1| hypothetical protein BIFANG_02353 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229784886|gb|EEP21000.1| hypothetical protein BIFANG_02353 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 207
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 103/189 (54%), Gaps = 4/189 (2%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E +L++ +LS+ T DK + L + + A+ ++ +I P+ FY K
Sbjct: 22 ETPLQLLIATVLSAQTTDKRVNTVTPELFAT-YPSCSDLACANPEDVERIIRPLGFYRTK 80
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
++ +A++ +++DG++PS++DEL +LPG+G K AN+V+ F++ G VDTHV R+
Sbjct: 81 TKHLLGLAQVLASRFDGEVPSTMDELTSLPGVGRKTANVVLG-NAFHIPGFPVDTHVMRV 139
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RL W + + +P + P E+W ++ L+ G+ IC +P CG+C
Sbjct: 140 TGRLRWRSD--WRHANPNPVAVEREITACFPPEQWTDLSHRLILHGRAICHARKPDCGIC 197
Query: 203 TVSEYCPSA 211
+++ CPSA
Sbjct: 198 PLADSCPSA 206
>gi|293376428|ref|ZP_06622660.1| endonuclease III [Turicibacter sanguinis PC909]
gi|325845046|ref|ZP_08168362.1| endonuclease III [Turicibacter sp. HGF1]
gi|292644937|gb|EFF63015.1| endonuclease III [Turicibacter sanguinis PC909]
gi|325488922|gb|EGC91315.1| endonuclease III [Turicibacter sp. HGF1]
Length = 214
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 100/183 (54%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F ++L+ LLS+ T DK + Q L + E K + ++ + + Y KA N
Sbjct: 31 FELVLAVLLSAQTTDKSVNKLTQTLFEK-YKCPEDYIKVPLSELEQDVKTIGLYRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++I L KYDG +PS+ +EL+ LPG+G K AN+V+++G F V I VDTHV RI R
Sbjct: 90 IQALSQILLDKYDGVVPSTFEELVKLPGVGRKTANVVLSVG-FGVPRIAVDTHVERISKR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L + +K + + L + +P+ W + + L++ FG+ CT P+C C +
Sbjct: 149 LDFA------KKDDTVLEVENRLMKLIPENRWSKAHHLMIFFGRYHCTAKNPKCETCPLF 202
Query: 206 EYC 208
+ C
Sbjct: 203 DAC 205
>gi|168701184|ref|ZP_02733461.1| endonuclease III [Gemmata obscuriglobus UQM 2246]
Length = 250
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%), Gaps = 10/211 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + L TA + D ++ L+ P FY KA N
Sbjct: 41 FQLLVAVVLSAQCTDKRVNTITPALFAR-FPTAADMATCDIRELEQLVKPSGFYKNKAKN 99
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ + ++ G +P+ LD+L++LPG+G K AN++ F G+ VDTHV R+ R
Sbjct: 100 IRAACVEMVARFGGQVPTDLDDLVSLPGVGRKTANVIRGHA-FETPGVTVDTHVGRLSRR 158
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + SP + AL +P+ EW+ + L+ G+ +C +PRC C V+
Sbjct: 159 LGLT-------RHQSPVKVELALAEIVPQAEWLHFSGRLIMHGRKVCLARKPRCEQCAVA 211
Query: 206 EYCPS-AFKESSTSSSKSKKSESSSLRKLER 235
+ CP K + S + KK++ S ++ +R
Sbjct: 212 DLCPKVGVKGLAASRRRKKKAKPDSPQRAQR 242
>gi|47223872|emb|CAG06049.1| unnamed protein product [Tetraodon nigroviridis]
Length = 293
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 84/132 (63%), Gaps = 2/132 (1%)
Query: 6 PVYSLGVDE-TDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
PV ++G D+ DS P + +RF VL+S +LSS TKD+V A+++L +G T E I
Sbjct: 48 PVDNMGADKCYDSDAPAQVKRFQVLVSLMLSSQTKDQVTSAAMRKLRAHGC-TVENILAT 106
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
+E T+ LIYPV F+ KA +K + + T++ GDIP S++ L+ LPG+GPKMA++ M
Sbjct: 107 NEETLGRLIYPVGFWRNKARYLKLTSAMLQTEFGGDIPDSVEGLVRLPGVGPKMAHLAMD 166
Query: 125 LGWFNVQGICVD 136
+ W V GI D
Sbjct: 167 IAWGQVSGIGRD 178
>gi|426402569|ref|YP_007021540.1| endo III-related endonuclease [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425859237|gb|AFY00273.1| endo III-related endonuclease [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 217
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + L + T +A+ KA ++++LI FY KA N
Sbjct: 38 FELLVATVLSAQCTDERVNMVTPALFKK-YPTPKAMAKAPVESLEELIRSTGFYKNKAKN 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNV-QGICVDTHVHRICN 144
+K A + K+ G++P +L+ L+ L G+G K AN+V+ FN+ GI VDTHV R+ N
Sbjct: 97 LKACATTLVEKHGGEVPQNLEALVELGGVGRKTANVVLG-NAFNIPSGIVVDTHVTRLSN 155
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
R GWV KT + L +++P E+W+ + L+ G+ +C +P C C +
Sbjct: 156 RFGWV-------KTDNAVMIERQLSKFVPVEDWIMLPHWLISHGRAVCKARKPACSHCFL 208
Query: 205 SEYCP 209
E CP
Sbjct: 209 EETCP 213
>gi|162452188|ref|YP_001614555.1| endonuclease III [Sorangium cellulosum So ce56]
gi|161162770|emb|CAN94075.1| endonuclease III [Sorangium cellulosum So ce56]
Length = 253
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 85/153 (55%), Gaps = 7/153 (4%)
Query: 76 VAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICV 135
+ + +K N+ +A+ + ++ G++P +L EL+ LPG+G K AN+V+ + + +G+ V
Sbjct: 107 MGMFNQKGKNIVGLARGLIERHGGEVPRTLAELVKLPGVGRKTANVVLGVAFGAPEGVVV 166
Query: 136 DTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPL 195
DTHV R+ RLGW T + PEQ L P+ +W ++ L+ G+ IC
Sbjct: 167 DTHVQRLSQRLGWTT-------SDKPEQIERDLVALFPRRDWDMLSHTLIFHGRRICFAR 219
Query: 196 RPRCGMCTVSEYCPSAFKESSTSSSKSKKSESS 228
+P CG C +S+ CPSAF+ + ++ ++
Sbjct: 220 KPACGGCGISDACPSAFRAENVGRKPPRRRGAA 252
>gi|407473538|ref|YP_006787938.1| endonuclease III [Clostridium acidurici 9a]
gi|407050046|gb|AFS78091.1| endonuclease III [Clostridium acidurici 9a]
Length = 213
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 102/183 (55%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + ++L ++ +T E K E ++ LI FY K+ +
Sbjct: 33 FELLVATILSAQCTDKRVNIVTEKLFKD-YNTPEDFLKLKEGELELLIKSTGFYRNKSKS 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++I + KY+ +P + +EL+ LPG+G K AN+VM+ F + I VDTHV R+ NR
Sbjct: 92 ILGTSRILVDKYNSQVPDTREELMKLPGVGRKTANVVMS-NAFGKEAIAVDTHVFRVSNR 150
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G +S+ ++T E L + +P+ EW + + LL+ G+ IC P+C +C +
Sbjct: 151 IGLAN-------SSNVDKTEEDLMKNIPENEWSKAHHLLIFHGRRICKARNPQCELCPLR 203
Query: 206 EYC 208
C
Sbjct: 204 GVC 206
>gi|384440189|ref|YP_005654913.1| Endonuclease III [Thermus sp. CCB_US3_UF1]
gi|359291322|gb|AEV16839.1| Endonuclease III [Thermus sp. CCB_US3_UF1]
Length = 215
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ +LS+ DK + A L T EA+ A ++ I + Y K
Sbjct: 33 ENPFQLLVATVLSAQATDKSVNEATPALFAR-FPTPEALAAASPEAVEPYIRRIGLYKTK 91
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ +A+ + ++ G++P L+ALPG+G K A +V+ F V GI VDTHV R+
Sbjct: 92 AKNLVALARRLVAEHGGEVPRDKKALMALPGVGWKTATVVLGAA-FGVPGIAVDTHVARV 150
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RLG PEQ L+ PKE+WV ++ LV G+ +CT +PRC C
Sbjct: 151 SRRLGL-------SLAKRPEQVGAELEALFPKEDWVFLHHALVLHGRYVCTARKPRCRDC 203
Query: 203 TVSEYCPS 210
++ CPS
Sbjct: 204 PLAPSCPS 211
>gi|298241894|ref|ZP_06965701.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
gi|297554948|gb|EFH88812.1| endonuclease III [Ktedonobacter racemifer DSM 44963]
Length = 232
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
++++ LS+ D+ + RL + + E A + ++ I FY KA N++
Sbjct: 46 LMVATQLSAQCTDERVNIVTARLFKK-YRSVEDYASASQEELEQDIRSTGFYRNKARNLR 104
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ L++Y G++P +++ LL+L G+ K AN+V+ + V G VDTHV R+ RLG
Sbjct: 105 SACQRILSEYHGEVPRTMEGLLSLAGVARKTANVVLGNAFGIVDGFVVDTHVGRLSRRLG 164
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W Q ++P + + L R +P+++W+ ++ LL+ G+ IC +P C CT++
Sbjct: 165 WTQQ-------TNPVKVEQELMRIIPQQDWLDLSHLLIFHGRAICDARKPLCTQCTLAVL 217
Query: 208 CPSAFKESSTSSSKSKKSES 227
CPSA + +KSK S++
Sbjct: 218 CPSA-----SLPTKSKDSQA 232
>gi|405375604|ref|ZP_11029631.1| Endonuclease III [Chondromyces apiculatus DSM 436]
gi|397086133|gb|EJJ17273.1| Endonuclease III [Myxococcus sp. (contaminant ex DSM 436)]
Length = 215
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+AI AD A +++ + P F+ +K +++ +++ L K+ G++P +DEL+ LPG+ K
Sbjct: 63 QAIADADTAALEEDLKPTGFFKQKTKSVQAMSRALLEKFGGEVPQRIDELVTLPGVARKT 122
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN+V+ + GI VDTHV R+ RLG K PE + L + +P+ +W
Sbjct: 123 ANVVLNTAFNIPSGIIVDTHVARVSQRLGLT-------KKEKPEAIEDDLMKLVPQSDWT 175
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTS 218
P V G+ CT +P+C C VS CP E+ S
Sbjct: 176 FFGPATVLHGRYTCTAKKPKCNACIVSSICPRIGVEAPAS 215
>gi|406977218|gb|EKD99414.1| Endonuclease III (DNA-(Apurinic or apyrimidinic site) lyase)
[uncultured bacterium]
Length = 211
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 111/212 (52%), Gaps = 13/212 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
KTL+ Y V E + + P + AV+LSA T DK + Q+L T +
Sbjct: 12 KTLQQAYPKPVTELNF-VNPMQLAVAVMLSAQ----TTDKKVNQITQKLFTK-YKTWQDF 65
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+AD T++ I V F+ KA + K K+ L+ + G++P ++ EL+ +PG+ K AN+
Sbjct: 66 AEADLKTLQADIRGVNFHLGKAERLIKAGKVMLSGFGGELPKTIPELIKIPGVARKTANV 125
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
++ W +GI VDTH+ R+ NRLG T Q E+ AL LPKE W +
Sbjct: 126 ILNEVWDIAEGIVVDTHITRVSNRLGLTTN----QDAVKIEKDLMAL---LPKEYWRNYS 178
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFK 213
+V G+ ICT + +C C +++ CPSAFK
Sbjct: 179 GAVVLLGRYICTAKKVKCEECPLNKLCPSAFK 210
>gi|294495039|ref|YP_003541532.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Methanohalophilus mahii DSM 5219]
gi|292666038|gb|ADE35887.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Methanohalophilus mahii DSM 5219]
Length = 212
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ + D + + L + + D AD + ++ IY FY KA +++
Sbjct: 35 LLVATILSAQSTDVQINKVTRELFRKYRSVFDYAD-ADISELEKDIYSTGFYRNKAKHLQ 93
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ A++ + +DG++PS++++LL LPG+ K AN+V+ G+ GI VDTHV R+ RLG
Sbjct: 94 QSARVIIEDFDGEVPSTMEDLLKLPGVARKTANIVLARGFGVKAGIAVDTHVKRLATRLG 153
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ P + L + + EW + L+ G+ IC +P CG C V+
Sbjct: 154 FTVN-------KDPVKIERDLMELVDRNEWDDFSLTLILHGRNICFARKPACGKCVVNHL 206
Query: 208 CPSAF 212
CPS+
Sbjct: 207 CPSSL 211
>gi|213691195|ref|YP_002321781.1| endonuclease III [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
gi|213522656|gb|ACJ51403.1| endonuclease III [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
Length = 228
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + A+ A ++D+I+P+ FY K ++
Sbjct: 38 LLIATVLSAQTTDKRVNTVTPELFAT-FPTARDLAAANPAQVEDIIHPLGFYRSKTQHLI 96
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++ G +P ++D L +LPG+G K AN+V+ F++ G VDTHV R+ RL
Sbjct: 97 GLATALDERFGGVVPRTMDGLTSLPGVGRKTANVVLG-NAFDIPGFPVDTHVMRVTGRLR 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + + P EEW ++ L+ FG+ C P C C +S+
Sbjct: 156 WRSD--WRSAHPDPVKIEKEITACFPPEEWTNLSHRLILFGRATCHARTPDCANCPLSDT 213
Query: 208 CPSAFKESSTSSSK 221
CPS + S+SK
Sbjct: 214 CPSYAPPAGKSTSK 227
>gi|283782700|ref|YP_003373454.1| endonuclease III [Gardnerella vaginalis 409-05]
gi|298253131|ref|ZP_06976923.1| EndoIII-like endonuclease [Gardnerella vaginalis 5-1]
gi|283442104|gb|ADB14570.1| endonuclease III [Gardnerella vaginalis 409-05]
gi|297532526|gb|EFH71412.1| EndoIII-like endonuclease [Gardnerella vaginalis 5-1]
Length = 224
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 6/187 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L + A ++ A + ++ +IYP+ FY KA N
Sbjct: 43 FELLIATVLSAQTTDKRVNIVTPELF-SIFPNASSLAAAPVSQVESIIYPLGFYRVKAQN 101
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ L + G +PS+++ L++LPG+G K AN+V+ F + G VDTHV R+ R
Sbjct: 102 IISLSACLLNNFSGIVPSNMEALISLPGVGRKTANVVLG-NAFGLPGFPVDTHVIRVTGR 160
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW Q +P + + +EW ++ L+ G+ ICT P+C C ++
Sbjct: 161 LGW----RKVQNRPNPVAIEREITAYFAPKEWTNLSHRLILHGRKICTARNPKCVSCPLN 216
Query: 206 EYCPSAF 212
CPSA
Sbjct: 217 TTCPSAI 223
>gi|315917193|ref|ZP_07913433.1| endonuclease III [Fusobacterium gonidiaformans ATCC 25563]
gi|313691068|gb|EFS27903.1| endonuclease III [Fusobacterium gonidiaformans ATCC 25563]
Length = 213
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + +++ + ++T E K + I++ I FY KA N
Sbjct: 31 FELLVAVILSAQCTDVRVNIVTKQMFPH-VNTPEQFAKMEVEEIEEWIRSTGFYHNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L Y G++P +++L+ L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSQQLLELYHGEVPQDMEQLVNLAGVGRKTANVVRGEIWGLADGITVDTHVRRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V K P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGFV-------KEEDPIRIERELMKIVPKKSWIDFSHYLILQGRDTCIARRPRCNQCEIS 202
Query: 206 EYC 208
E+C
Sbjct: 203 EFC 205
>gi|108758880|ref|YP_631351.1| endonuclease III [Myxococcus xanthus DK 1622]
gi|108462760|gb|ABF87945.1| endonuclease III [Myxococcus xanthus DK 1622]
Length = 210
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 7/151 (4%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A AD A +++ + P F+ +K +++ +++ L K+ G++P ++DEL+ LPG+ K
Sbjct: 63 QAFADADTAALEEDLKPTGFFKQKTKSVQAMSRALLDKFGGEVPHTIDELVTLPGVARKT 122
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN+V+ + GI VDTHV R+ RLG K PE E L + +P+E+W
Sbjct: 123 ANVVLNTAFNLPSGIIVDTHVARVSQRLGLT-------KKDKPEAIEEDLMKLVPQEQWT 175
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
P V G+ CT +P+C C V + CP
Sbjct: 176 FFGPATVLHGRYTCTAKKPKCDDCIVKDVCP 206
>gi|452910245|ref|ZP_21958926.1| Endonuclease III [Kocuria palustris PEL]
gi|452834492|gb|EME37292.1| Endonuclease III [Kocuria palustris PEL]
Length = 320
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 7 VYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADE 66
Y V E D P + +L++ +LS+ T D + L + + +A+
Sbjct: 83 AYPYAVAELDFDSP-----WQLLVATVLSAQTTDVRVNATTPALFER-WPDPRGLAEAER 136
Query: 67 ATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLG 126
+++++ P+ FY KA + + +A+ ++DG +P L++L+ LPG+G K AN+V+
Sbjct: 137 TEVEEMLRPLGFYRSKARSAQGLAQAIEDEHDGQVPGRLEDLVKLPGVGRKTANVVLG-N 195
Query: 127 WFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVG 186
F+V GI VDTH R+ R GW Q P + + E+W ++ LV
Sbjct: 196 AFDVPGITVDTHFGRLARRFGWTGQ-------EDPVKVEHEVGALFEPEDWTDLSHRLVY 248
Query: 187 FGQTICTPLRPRCGMCTVSEYCPS 210
G+ IC RP CG+C V++ CPS
Sbjct: 249 HGRRICHAKRPACGVCPVADLCPS 272
>gi|302535304|ref|ZP_07287646.1| endonuclease III [Streptomyces sp. C]
gi|302444199|gb|EFL16015.1| endonuclease III [Streptomyces sp. C]
Length = 275
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L T E +
Sbjct: 34 RELAEVYPYAHPELDFRNP-----FELLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDM 87
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+A ++++I P F+ KA ++ ++K + G++P +++L+ LPG+G K AN+
Sbjct: 88 AEAVPEELEEIIRPTGFFRAKAKSLLGLSKALRDDFGGEVPGRIEDLVTLPGVGRKTANV 147
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ R W Q PE+ + PK EW ++
Sbjct: 148 VLG-NAFGVPGITVDTHFGRLVRRFKWTEQ-------EDPEKVEAEICAIFPKSEWTMLS 199
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+V G+ IC +P CG C ++ CP A+ E T K+KK
Sbjct: 200 HRVVFHGRRICHARKPACGACPIAPLCP-AYGEGETDPEKAKK 241
>gi|357636663|ref|ZP_09134538.1| endonuclease III [Streptococcus macacae NCTC 11558]
gi|357585117|gb|EHJ52320.1| endonuclease III [Streptococcus macacae NCTC 11558]
Length = 207
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 8/177 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
+ F +L++ +LS+ T D + A L T E + KA EA I I + Y K
Sbjct: 29 KNHFELLVAVVLSAQTTDAAVNKATPALFA-AFPTPEKMAKASEAEIASYISKLGLYRNK 87
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A +KK A L + G +P + EL +L G+G K AN+VM++G F + VDTHV RI
Sbjct: 88 AKFLKKCANQLLENFGGQVPQTRKELESLSGVGRKTANVVMSVG-FGLPAFAVDTHVERI 146
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
C V +K+++P + + + LPKEEW+ + ++ FG++IC P P C
Sbjct: 147 CKHHNIV------KKSATPLEVEKRVMEVLPKEEWLPAHQAMINFGRSICHPQNPEC 197
>gi|270308206|ref|YP_003330264.1| endonuclease III protein [Dehalococcoides sp. VS]
gi|270154098|gb|ACZ61936.1| endonuclease III protein [Dehalococcoides sp. VS]
Length = 225
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 101/187 (54%), Gaps = 8/187 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + DK+ + L + A+A +A ++ I F+ KA N
Sbjct: 41 FEMLVATILSAQSTDKMINKITPALFKK-YPDAKAFAEASLDKLEQDIKSSGFFHNKALN 99
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ A+ ++++ G +PS++ ++L LPG+G K AN+V+ + V+GI VDTHV R+ R
Sbjct: 100 IMGAARGVVSRFGGVVPSNMADMLTLPGVGRKTANVVLHNAFGLVEGIAVDTHVKRLSER 159
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + P + + L ++P+ EW + L+ G+ +C +PRC C +
Sbjct: 160 LGLTNN-------TDPVKIEQDLMEFIPRNEWGNFSYYLIDHGRAVCDAKKPRCEECVLK 212
Query: 206 EYCPSAF 212
+ CPSA+
Sbjct: 213 DICPSAY 219
>gi|373114020|ref|ZP_09528237.1| endonuclease III [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
gi|371652907|gb|EHO18313.1| endonuclease III [Fusobacterium necrophorum subsp. funduliforme
1_1_36S]
Length = 213
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + +++ + ++T E + I++ I+ FY KA N
Sbjct: 31 FELLVAVILSAQCTDVRVNIVTKQMFPH-VNTPEQFANMEVEEIEEWIHSTGFYHNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L Y G++P +D+L+ L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSQQLLELYGGEVPQDMDKLVNLAGVGRKTANVVRGEIWGLADGITVDTHVRRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGFVQE-------EDPIKIERELMKIVPKKSWIDFSHYLILQGRDTCIARRPRCNQCEIS 202
Query: 206 EYC 208
E+C
Sbjct: 203 EFC 205
>gi|162453022|ref|YP_001615389.1| endonuclease III [Sorangium cellulosum So ce56]
gi|161163604|emb|CAN94909.1| putative endonuclease III [Sorangium cellulosum So ce56]
Length = 213
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 10/183 (5%)
Query: 30 LSALLSSLTKDKVADGALQRL---LQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNM 86
L L++++ + D + R+ L TA+A A A +++ + P FY +K +
Sbjct: 34 LDLLVATILAAQCTDERVNRVTATLFPKYPTAQAYADAPTAELEEELKPTGFYRQKTKTV 93
Query: 87 KKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRL 146
+ + + ++ G++P+++ EL LPG+ K AN+V+ + GI VDTHV R+ R+
Sbjct: 94 QATCRELVARFGGEVPATMAELTTLPGVARKTANVVLNTAFDIPSGIIVDTHVARLSGRI 153
Query: 147 GWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE 206
G K PEQ E L + +PK++W P LV G+ C +P+CG C +SE
Sbjct: 154 GL-------SKREKPEQIEEDLMKIVPKDQWTFFGPALVLHGRYTCVARKPKCGECRMSE 206
Query: 207 YCP 209
+CP
Sbjct: 207 FCP 209
>gi|384198302|ref|YP_005584045.1| endonuclease III [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
gi|320457254|dbj|BAJ67875.1| endonuclease III [Bifidobacterium longum subsp. infantis ATCC 15697
= JCM 1222]
Length = 217
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 101/194 (52%), Gaps = 4/194 (2%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T DK + L TA + A+ A ++D+I+P+ FY K ++
Sbjct: 27 LLIATVLSAQTTDKRVNTVTPELFAT-FPTARDLAAANPAQVEDIIHPLGFYRSKTQHLI 85
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A ++ G +P ++D L +LPG+G K AN+V+ F++ G VDTHV R+ RL
Sbjct: 86 GLATALDERFGGVVPRTMDGLTSLPGVGRKTANVVLG-NAFDIPGFPVDTHVMRVTGRLR 144
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + + P + + + P EEW ++ L+ FG+ C P C C +S+
Sbjct: 145 WRSD--WRSAHPDPVKIEKEITACFPPEEWTNLSHRLILFGRATCHARTPDCANCPLSDT 202
Query: 208 CPSAFKESSTSSSK 221
CPS + S+SK
Sbjct: 203 CPSYAPPAGKSTSK 216
>gi|297243033|ref|ZP_06926971.1| EndoIII-like endonuclease [Gardnerella vaginalis AMD]
gi|296889244|gb|EFH27978.1| EndoIII-like endonuclease [Gardnerella vaginalis AMD]
Length = 224
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 100/187 (53%), Gaps = 6/187 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D+ + L + A ++ A + ++ +IYP+ FY KA N
Sbjct: 43 FELLIATVLSAQTTDRRVNIVTPELF-SIFPNASSLAAAPVSQVESIIYPLGFYRVKAQN 101
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ L + G +PS++++L++LPG+G K AN+V+ F + G VDTHV R+ R
Sbjct: 102 IISLSACLLNNFSGIVPSNMEDLISLPGVGRKTANVVLG-NAFGLPGFPVDTHVIRVTGR 160
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW Q +P + + +EW ++ L+ G+ ICT P+C C ++
Sbjct: 161 LGW----RKVQNRPNPVAIEREITAYFAPKEWTNLSHRLILHGRKICTARNPKCVSCPLN 216
Query: 206 EYCPSAF 212
CPSA
Sbjct: 217 TTCPSAI 223
>gi|297572248|ref|YP_003698022.1| endonuclease III [Arcanobacterium haemolyticum DSM 20595]
gi|296932595|gb|ADH93403.1| endonuclease III [Arcanobacterium haemolyticum DSM 20595]
Length = 226
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L E + KA ++D+++P+ FY KA +
Sbjct: 47 FELLVATVLSAQTTDARVNSVTPNLFAT-FPNPETMAKAPLEVLEDILHPLGFYRAKARS 105
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + ++ G++P +L+EL+ LPG+G K AN+V+ F V GI VDTHV R+ R
Sbjct: 106 LNGLANGLMERFGGEVPGTLEELITLPGVGRKTANVVLG-NAFGVPGITVDTHVGRLSRR 164
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
W + + P + L + LP EW I ++ G+ +C +P C C ++
Sbjct: 165 WAWT-------RETDPVKAEMDLAKILPHSEWTIICHRVIDHGRRVCHSRKPACEACPMT 217
Query: 206 EYCPS 210
+ CPS
Sbjct: 218 DLCPS 222
>gi|421874622|ref|ZP_16306225.1| endonuclease III [Brevibacillus laterosporus GI-9]
gi|372456478|emb|CCF15774.1| endonuclease III [Brevibacillus laterosporus GI-9]
Length = 190
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 8/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ LLS+ DK + + L Q T E K ++D I + Y KA +++ +
Sbjct: 3 IAVLLSAQCTDKKVNQVTEHLFQK-YKTPEDYLKVSLEELQDDIRQIGLYKNKAKHIQSL 61
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
++ L +Y G++P+ +EL+ LPG+G K AN+V+++ F V I VDTHV RI RLG+
Sbjct: 62 CRLLLEEYGGEVPNKHEELVKLPGVGRKTANVVVSVA-FGVPAIAVDTHVERISKRLGFC 120
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
T P Q E L + +PK++W + ++ FG+ C P+C +C + + CP
Sbjct: 121 PDDAT------PVQVEEILMKKIPKKDWSDTHHRMIFFGRYHCKAQSPQCDICPLEDVCP 174
Query: 210 S 210
+
Sbjct: 175 T 175
>gi|153853551|ref|ZP_01994931.1| hypothetical protein DORLON_00920 [Dorea longicatena DSM 13814]
gi|149753706|gb|EDM63637.1| endonuclease III [Dorea longicatena DSM 13814]
Length = 208
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L++ +LS+ D + + L + + EA AD ++ I P FY K
Sbjct: 27 ETPWQLLIATMLSAQCTDARVNIVTKDLFRK-YPSVEAFADADLKELEQDIKPTGFYHNK 85
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ K KY+G++PS L++LL+L G+G K AN++ ++V + VDTHV RI
Sbjct: 86 AKNIIACMKDIRDKYNGEVPSELEDLLSLAGVGRKTANVIRG-NIYHVPSVVVDTHVKRI 144
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRLG K P++ + L + LP++ W+ N ++ FG+TIC+ P+C C
Sbjct: 145 SNRLGLT-------KNQDPDKIEQDLMKELPEDHWILWNIHIITFGRTICSARSPKCEDC 197
Query: 203 TVSEYC 208
+ +YC
Sbjct: 198 FLQKYC 203
>gi|392394047|ref|YP_006430649.1| DNA-(apurinic or apyrimidinic site) lyase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525125|gb|AFM00856.1| endonuclease III [Desulfitobacterium dehalogenans ATCC 51507]
Length = 208
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 9/187 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + ++L +N T E+ +++ I + Y KA N
Sbjct: 28 FELLIATMLSAQATDKKVNQVTEKLFRN-YKTPESFLTLSLKKMEEAIKELGLYRNKAKN 86
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I + KY+G++P S++ L LPG+G K AN+V++ +N+ VDTHV R+ NR
Sbjct: 87 ILATCQILIEKYNGEVPDSMEALTQLPGVGRKTANVVLS-NAYNIPAFAVDTHVLRVSNR 145
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + GT +P+ + L +P+ +W++ + L+ G+ IC P+C C +S
Sbjct: 146 LGLAS--GT-----NPDLIEKQLMNSIPRSQWIQAHHWLIWHGRRICAARNPKCSECPLS 198
Query: 206 EYCPSAF 212
CPS
Sbjct: 199 PLCPSTL 205
>gi|281423216|ref|ZP_06254129.1| endonuclease III [Prevotella oris F0302]
gi|281402552|gb|EFB33383.1| endonuclease III [Prevotella oris F0302]
Length = 229
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 107/188 (56%), Gaps = 7/188 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F ++++ LLS+ DK + L ++ TAEA+ +AD I LI V++ KA +
Sbjct: 31 FQLIVATLLSAQCTDKRINMITPELYRH-YPTAEAMAQADWEDIFQLIKSVSYPNSKAHH 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AKI + +++G++P + D+L LPG+G K AN+V + WF + VDTHV+R+ +R
Sbjct: 90 LSEMAKILVERFNGEVPDNTDDLTQLPGVGRKTANVVQAV-WFGKPTLAVDTHVYRVSHR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V + ++P + L +++PK + + L+ G+ IC +P+C C +
Sbjct: 149 LGLVPETA-----NTPLKVELELMKYIPKADVGNAHHWLLLHGRYICKSQKPQCQDCPFN 203
Query: 206 EYCPSAFK 213
+CP+ K
Sbjct: 204 TFCPTGVK 211
>gi|310779540|ref|YP_003967873.1| endonuclease III [Ilyobacter polytropus DSM 2926]
gi|309748863|gb|ADO83525.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Ilyobacter polytropus DSM 2926]
Length = 219
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 8/197 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + +++ + ++T EA + I+ I F+ KA N
Sbjct: 31 FELLVAVILSAQCTDVRVNMVTEKMFK-VVNTPEAFMEMPLKDIETHIKSTGFFRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K +K + KY+G++PS ++ L+ALPG+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKMCSKELVEKYNGEVPSKMENLVALPGVGRKTANVVRGEIWGLSDGITVDTHVKRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V K + E+ L +PK+ W+ + L+ G+ +C RP+C C ++
Sbjct: 150 IGFV-------KEENVEKIERELMEIVPKKRWIDFSHYLILQGRDVCIARRPKCSACEIN 202
Query: 206 EYCPSAFKESSTSSSKS 222
C K SS K+
Sbjct: 203 HLCNYGRKMMRKSSEKN 219
>gi|337288175|ref|YP_004627647.1| endonuclease III [Thermodesulfobacterium sp. OPB45]
gi|334901913|gb|AEH22719.1| endonuclease III [Thermodesulfobacterium geofontis OPF15]
Length = 225
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 8/181 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + + L + TA+ +AD + + I FY +KA +K
Sbjct: 46 LLVATILSAQCTDERVNEVTKDLFKK-YKTAKDFAEADLDELAEDIKSTGFYRQKAKYIK 104
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ KI + KY+G++P +++ELL LPG+ K AN+V+ + V+GI VDTHV +I RLG
Sbjct: 105 ECCKILVEKYNGEVPKTMEELLELPGVARKTANIVLANAYGIVEGIPVDTHVRKISQRLG 164
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
V+ + PE+ + L +PK++W L+ G+ IC +P+C C + +
Sbjct: 165 IVS-------SKQPEKMEKELMEIVPKKDWFAFPYLIQAHGRKICLGRKPKCEECILKDL 217
Query: 208 C 208
C
Sbjct: 218 C 218
>gi|443294606|ref|ZP_21033700.1| Endonuclease III [Micromonospora lupini str. Lupac 08]
gi|385882078|emb|CCH21966.1| Endonuclease III [Micromonospora lupini str. Lupac 08]
Length = 238
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 9/204 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ DK + +L TA A AD +++LI P FY K ++ K+
Sbjct: 23 VATILSAQCTDKKVNEVTPKLFAR-YPTAAAYAGADRGEMEELIRPTGFYRNKTDSLLKL 81
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ L +YDG +P L +L+ LPGIG K AN+++ F+V GI VDTH R+ +R
Sbjct: 82 GQALLDRYDGRVPGRLVDLVTLPGIGRKTANVILG-NAFDVPGITVDTHFQRLVHRWRLT 140
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
T+ + P + A+ PK +W ++ ++ G+ +C +P CG CT+++ CP
Sbjct: 141 TE-------TDPVKIEHAIGALYPKRDWTMLSHRIIFHGRRVCHARKPACGACTLAKLCP 193
Query: 210 SAFKESSTSSSKSKKSESSSLRKL 233
S + ++ +K + R L
Sbjct: 194 SYGTGPTEPAAAAKLLKGPRARDL 217
>gi|257783933|ref|YP_003179150.1| endonuclease III [Atopobium parvulum DSM 20469]
gi|257472440|gb|ACV50559.1| endonuclease III [Atopobium parvulum DSM 20469]
Length = 223
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 16/210 (7%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
M L P +D D+ F +L+S +LS+ T D + L + A +
Sbjct: 20 MHKLYPSVQSALDYHDA--------FTLLISVMLSAQTTDAAVNKVTPELFRR-WPDAPS 70
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ A+ + ++I + F+ KA + + A+I LT+Y G++P ++++L+ LPG+G K AN
Sbjct: 71 MAAANIVEVGEVIQTIGFWRAKAKHCVETAQILLTEYGGEVPGTMEDLVTLPGVGRKTAN 130
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ + V GI VDTHV+RI R+ S+P + L LP E W +
Sbjct: 131 IVLNKMFNVVDGIAVDTHVYRISKRM-------RLSSASTPLAAEKDLLALLPHELWKDV 183
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
N + FG+ CT P+C C +S+ CPS
Sbjct: 184 NEEWIHFGRETCTARNPKCVGCPMSDICPS 213
>gi|419719449|ref|ZP_14246728.1| endonuclease III [Lachnoanaerobaculum saburreum F0468]
gi|383304362|gb|EIC95768.1| endonuclease III [Lachnoanaerobaculum saburreum F0468]
Length = 209
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPVA 77
P + FA +LSA + D + + ++ ++++K A+I ++ I+ +
Sbjct: 30 PWQLLFATILSA--------QCTDARVNIVTRDLYKKYDSLEKFASASIAEMERDIHSIG 81
Query: 78 FYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDT 137
FY KA N+ A+ L+ ++G++PS LD LL LPG+G K AN++ F++ I VDT
Sbjct: 82 FYHNKAKNLIACARKLLSDFNGEVPSDLDSLLTLPGVGRKTANVIRG-NIFDMPSIVVDT 140
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HV RI +LG ++ P + L LPK+ W+ N L+ G+TIC R
Sbjct: 141 HVKRITKKLGLT-------ESEDPVKIEFELMEILPKDHWILWNTDLITLGRTICIARRE 193
Query: 198 RCGMCTVSEYCPSA 211
+C +C + E CPSA
Sbjct: 194 KCDICFLREECPSA 207
>gi|335040513|ref|ZP_08533640.1| endonuclease III [Caldalkalibacillus thermarum TA2.A1]
gi|334179593|gb|EGL82231.1| endonuclease III [Caldalkalibacillus thermarum TA2.A1]
Length = 217
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F + ++ +LS+ D++ + + L N T E + ++ I + Y KA N
Sbjct: 31 FELTIAVMLSAQCTDQMVNKVTKELF-NKYRTPEDYVRVPLEELEQDIRQIGLYRNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+ +I + KY+G+IP S +EL+ LPGIG K AN++M+ F I VDTHV R+ R
Sbjct: 90 IKKMCQILIEKYNGEIPRSREELVQLPGIGRKTANVIMSTA-FGDPAIAVDTHVERVTKR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG T P Q + L + +PKEEW + L+ FG+ C P+C +C +
Sbjct: 149 LGICRWKDT------PLQVEKTLMKKVPKEEWAITHHRLIFFGRYHCKAQNPQCHVCPLF 202
Query: 206 EYC 208
E C
Sbjct: 203 ELC 205
>gi|330470528|ref|YP_004408271.1| endonuclease III [Verrucosispora maris AB-18-032]
gi|328813499|gb|AEB47671.1| endonuclease III [Verrucosispora maris AB-18-032]
Length = 259
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 9/204 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ DK + +L A+ AD A +++LI P FY K ++ ++
Sbjct: 44 VATILSAQCTDKKVNEVTPKLFARYPRAAD-YAGADRAEMEELIRPTGFYRNKTNSLIQL 102
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + +YDG +P L +L+ LPGIG K AN+++ F+V GI VDTH R+ +R G
Sbjct: 103 GQALVQRYDGQVPGRLADLVTLPGIGRKTANVILG-NAFDVPGITVDTHFQRLVHRWGLT 161
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
++ + P + A+ PK +W ++ ++ G+ +C +P CG CT+++ CP
Sbjct: 162 SE-------TDPVKIEHAIGAMFPKRDWTMLSHRIIFHGRRVCHARKPACGACTLTKLCP 214
Query: 210 SAFKESSTSSSKSKKSESSSLRKL 233
S + ++ +K + R L
Sbjct: 215 SYGTGPTEPAAAAKLLKGPRARDL 238
>gi|108805468|ref|YP_645405.1| DNA-(apurinic or apyrimidinic site) lyase/endonuclease III
[Rubrobacter xylanophilus DSM 9941]
gi|108766711|gb|ABG05593.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Rubrobacter xylanophilus DSM 9941]
Length = 214
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + +RL + TAE A ++ I P FY KA ++
Sbjct: 32 LLVAVILSAQCTDERVNRVTERLFRK-YRTAEDYASAPLEELEQDIRPTGFYRNKARAIQ 90
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+A+ L ++ G++P +++EL+ALPG+G K AN+V+ + +G+ VDTHV R+ RLG
Sbjct: 91 GMARALLERHGGEVPKTMEELVALPGVGRKTANVVLGNAFGVNEGVVVDTHVRRVSRRLG 150
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ + PE+ L +P+EE LL+ G+ +C RP C C +++
Sbjct: 151 LTS-------SDDPEKIERDLLPQVPEEERTLFAHLLIFHGRRVCKARRPDCPGCVLNDI 203
Query: 208 CPSA 211
CPS+
Sbjct: 204 CPSS 207
>gi|384916798|ref|ZP_10016943.1| Endonuclease III [Methylacidiphilum fumariolicum SolV]
gi|384525758|emb|CCG92816.1| Endonuclease III [Methylacidiphilum fumariolicum SolV]
Length = 225
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 100/182 (54%), Gaps = 8/182 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + +L Q HTA A +++ I+ + FY KA N+K
Sbjct: 46 LLIATILSARCTDEQVNLVTAKLFQK-YHTAADYAAAPIEELENAIHSLGFYKTKAKNIK 104
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+I ++ +G++PS +++L+ LPG+G K AN+V+ + GI VDTHV R+ RLG
Sbjct: 105 NACQILASQCNGEVPSQMEKLVNLPGVGRKTANVVLGNAFGINDGIVVDTHVSRVSFRLG 164
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
T++K PE+ + L R +PKE W + L++ G+ C P C C ++E
Sbjct: 165 L-----TQEK--QPEKIEQDLMRCIPKESWTEFSNLIIWHGRKRCKARNPDCPHCELNEL 217
Query: 208 CP 209
CP
Sbjct: 218 CP 219
>gi|331083706|ref|ZP_08332817.1| endonuclease III [Lachnospiraceae bacterium 6_1_63FAA]
gi|330403917|gb|EGG83469.1| endonuclease III [Lachnospiraceae bacterium 6_1_63FAA]
Length = 217
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A KAD ++ I P FY KA N+ A+ Y G++P SL++L++LPG+G K
Sbjct: 62 QAFAKADLKELEQDIKPTGFYHNKAKNIIGCAQRICQVYSGEVPRSLEDLVSLPGVGRKT 121
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN++ F+ + VDTHV RI RLG+ K PE+ + L + LPKE W+
Sbjct: 122 ANVIRG-NIFHEPSVVVDTHVKRISKRLGFT-------KEEDPEKIEQDLMKVLPKEHWI 173
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N ++ FG+ IC P+C C ++EYC
Sbjct: 174 LYNIQIITFGRQICFARSPKCEECFLTEYC 203
>gi|328951624|ref|YP_004368959.1| endonuclease III [Marinithermus hydrothermalis DSM 14884]
gi|328451948|gb|AEB12849.1| endonuclease III [Marinithermus hydrothermalis DSM 14884]
Length = 221
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
++ LE Y E P F +L++ +LS+ DK + A L A A
Sbjct: 22 LERLEAAYPNARTELRHETP-----FQLLVATVLSAQATDKSVNAATPALFAR-YPDAFA 75
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ +A ++ I + Y KA N+ ++A++ + ++ G++P L+ LPG+G K A
Sbjct: 76 LAQATPEEVEPYIRRIGLYRTKAKNLVRLAQMLVERHGGEVPRDKQALMELPGVGWKTAT 135
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ F + GI VDTH+ R+ RL + +PE+ L+++ P+E WV +
Sbjct: 136 VVLGAA-FGIPGIAVDTHLARLAKRL-------CLSQARTPERIGAELEQYFPRERWVFV 187
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
+ L+ G+ +CT RPRC C ++E CPS
Sbjct: 188 HHALILHGRYVCTARRPRCEACVLAEACPS 217
>gi|409387026|ref|ZP_11239323.1| Endonuclease III [Lactococcus raffinolactis 4877]
gi|399205796|emb|CCK20238.1| Endonuclease III [Lactococcus raffinolactis 4877]
Length = 214
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 13/195 (6%)
Query: 14 ETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLI 73
E D++ P F +L++ +LS+ DK + A L ++++ AD + +++LI
Sbjct: 24 ELDAATP-----FQLLIAVILSAQATDKGVNKATPALFAK-YPDSQSLASADVSDVENLI 77
Query: 74 YPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGI 133
+ Y KA N+ + A++ T++ G+IP D L LPG+G K AN+V+ F + GI
Sbjct: 78 KTIGLYRSKAKNIVRTAEMIETEFGGEIPRDKDLLQTLPGVGRKTANVVLG-DAFGIPGI 136
Query: 134 CVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICT 193
VDTHV R+ RL V Q T + E L + +P+ EWV + L+ FG+ CT
Sbjct: 137 AVDTHVERVSKRLQLVKQSATVT------EVEEKLMKVVPESEWVVTHHRLIFFGRYHCT 190
Query: 194 PLRPRCGMCTVSEYC 208
P+C C V YC
Sbjct: 191 ARAPKCVACPVLPYC 205
>gi|54022312|ref|YP_116554.1| endonuclease III [Nocardia farcinica IFM 10152]
gi|54013820|dbj|BAD55190.1| putative endonuclease III [Nocardia farcinica IFM 10152]
Length = 280
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 8/153 (5%)
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
A A +A+ +++ I P FY K ++ + + + KYDG++P +L+EL+ LPGIG K
Sbjct: 107 ARAYAEANRTELEEYIRPTGFYRNKTSSLIGLGQALVEKYDGEVPHTLEELVQLPGIGRK 166
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
AN+++ F+V GI VDTH R+ R GW T+ P + A+ + +++W
Sbjct: 167 TANVILG-NAFDVPGITVDTHFGRLVRRWGWTTE-------EDPVKVEHAVGELIERKDW 218
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ ++ G+ +C RP CG C +++ CPS
Sbjct: 219 TMLSHRVIFHGRRVCHSRRPACGACVLAKDCPS 251
>gi|338212879|ref|YP_004656934.1| DNA-(apurinic or apyrimidinic site) lyase [Runella slithyformis DSM
19594]
gi|336306700|gb|AEI49802.1| DNA-(apurinic or apyrimidinic site) lyase [Runella slithyformis DSM
19594]
Length = 220
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+S ++S T D+ RL T E + + + +L+Y + +KA
Sbjct: 38 FEQLISCIISIRTLDETTIPVSLRLFAAA-RTPEELLRLTPEQLTELLYGATYPDQKAYT 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
M IAK + +YD +P+ D L AL G+GPK AN+ + + I VD HVHR+ NR
Sbjct: 97 MLGIAKAAVEQYDHRLPADYDSLTALKGVGPKCANLALGVATGQA-AISVDIHVHRVVNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V + + PE+T + L+ +P +W+ IN LL+ FG+ ICT PRC C V
Sbjct: 156 WGYV-------QANQPEKTLKQLEAKVPVPQWIEINRLLMPFGKHICTGTLPRCSTCPVL 208
Query: 206 EYC 208
+C
Sbjct: 209 AWC 211
>gi|435846406|ref|YP_007308656.1| endonuclease III [Natronococcus occultus SP4]
gi|433672674|gb|AGB36866.1| endonuclease III [Natronococcus occultus SP4]
Length = 227
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + + L + E DE + + + + +Y KA
Sbjct: 35 RLELLIAVILSAQCTDERVNAETEHLFEK-YDGPEEYAAVDEEELAEDLNSITYYNSKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+K + L ++DG++P ++DEL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIKSSCETILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE + L +P+ W + L + G+ +CT P C C +
Sbjct: 154 RLGLTEE-------ERPEAIEQELMEIVPEGYWQQFTHLCIDHGRAVCTARNPDCSDCVL 206
Query: 205 SEYCPSAFKESS 216
++ CPS +S
Sbjct: 207 ADICPSEKGDSD 218
>gi|283456809|ref|YP_003361373.1| endonuclease III [Bifidobacterium dentium Bd1]
gi|283103443|gb|ADB10549.1| endonuclease III [Bifidobacterium dentium Bd1]
Length = 221
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L A+ + AD ++D+I+ + F+ K N
Sbjct: 37 FELLVATVLSAQTTDKRVNMVTPVLFGRFPGPAD-LQAADPEQVEDIIHSIGFHRTKTKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ +YDG +P S++EL ALPG+G K AN+V+ F+ G VDTHV R+ R
Sbjct: 96 IIRLSHDLCERYDGTVPDSMEELTALPGVGRKTANVVLG-NAFDKPGFPVDTHVIRVTGR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + + T P + P EW ++ L+ G+T C +P C C ++
Sbjct: 155 LHWRSDWAS--PTPDPVAIEREITACFPPSEWTDLSHRLIMHGRTTCHARKPNCLDCPLN 212
Query: 206 EYCPSAFK 213
+ CPSAFK
Sbjct: 213 DTCPSAFK 220
>gi|448310828|ref|ZP_21500607.1| endonuclease III [Natronolimnobius innermongolicus JCM 12255]
gi|445607176|gb|ELY61069.1| endonuclease III [Natronolimnobius innermongolicus JCM 12255]
Length = 227
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + + L + AE A E + + + + +Y KA
Sbjct: 35 RLELLIAVILSAQCTDERVNTETEHLFEK-YGGAEDYANAPEEELAEDLNSITYYNSKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+K + L ++DG++P ++DEL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIKSSCETILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGIVVDTHVQRLTR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE + L +P+ W + L + G+ CT P C C +
Sbjct: 154 RLGLTEE-------QRPEAIEQELMEIVPEGYWQQFTHLCIDHGRATCTARNPDCSDCVL 206
Query: 205 SEYCPSAFKES 215
++ CPSA +S
Sbjct: 207 ADICPSAKGDS 217
>gi|16330354|ref|NP_441082.1| endonuclease III [Synechocystis sp. PCC 6803]
gi|383322095|ref|YP_005382948.1| endonuclease III [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383325264|ref|YP_005386117.1| endonuclease III [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383491148|ref|YP_005408824.1| endonuclease III [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384436415|ref|YP_005651139.1| endonuclease III [Synechocystis sp. PCC 6803]
gi|451814512|ref|YP_007450964.1| endonuclease III [Synechocystis sp. PCC 6803]
gi|3023691|sp|P73715.1|END3_SYNY3 RecName: Full=Endonuclease III; AltName: Full=DNA-(apurinic or
apyrimidinic site) lyase
gi|1652843|dbj|BAA17762.1| endonuclease III [Synechocystis sp. PCC 6803]
gi|339273447|dbj|BAK49934.1| endonuclease III [Synechocystis sp. PCC 6803]
gi|359271414|dbj|BAL28933.1| endonuclease III [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359274584|dbj|BAL32102.1| endonuclease III [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359277754|dbj|BAL35271.1| endonuclease III [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|451780481|gb|AGF51450.1| endonuclease III [Synechocystis sp. PCC 6803]
Length = 219
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + A +LSA + +KV QR A A+ D I++LI+ F+
Sbjct: 38 PVQLLVATILSAQCTDERVNKVTPALFQRY-----PDANALAYGDRQEIEELIHSTGFFR 92
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++ + + ++DG++P ++ELL LPG+ K AN+V+ + + G+ VDTHV
Sbjct: 93 NKAKNIQGACRKIVEEFDGEVPQRMEELLTLPGVARKTANVVLAHAFGILAGVTVDTHVK 152
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG K + P + L + +P+ +W + ++ G+ +C +P CG
Sbjct: 153 RLSQRLGLT-------KATDPIRIERDLMKLIPQPDWENFSIHIIYHGRAVCAARKPLCG 205
Query: 201 MCTVSEYCPSA 211
C ++ CPSA
Sbjct: 206 ECQLAHLCPSA 216
>gi|288818057|ref|YP_003432405.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|384128821|ref|YP_005511434.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|288787457|dbj|BAI69204.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
gi|308751658|gb|ADO45141.1| endonuclease III [Hydrogenobacter thermophilus TK-6]
Length = 209
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 8/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +L++ T D + +RL + T E + +++ I + +Y KA
Sbjct: 30 FELLIAVILAAQTTDAKVNHVTERLFKK-YKTPEDYLRVPLEELQEDISSINYYRNKAKY 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K K+ + Y G++P S++EL LPG+G K ANM++ + +GI VDTH R+ R
Sbjct: 89 IKGACKMIIEDYGGEVPKSIEELTRLPGVGRKTANMILYNAFGINEGIAVDTHTARVSKR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + P++ + L + PKEEW +++ LL+ G+ ICT P+ C +
Sbjct: 149 LGLTEE-------EKPDKIEQELMQITPKEEWGKLSNLLILHGRYICTAKNPKHKECVLY 201
Query: 206 EYCPS 210
+ CPS
Sbjct: 202 DLCPS 206
>gi|317471045|ref|ZP_07930420.1| endonuclease III [Anaerostipes sp. 3_2_56FAA]
gi|316901486|gb|EFV23425.1| endonuclease III [Anaerostipes sp. 3_2_56FAA]
Length = 216
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 101/188 (53%), Gaps = 9/188 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L++ +LS+ D + ++L + + + EA +AD ++ IY FY K
Sbjct: 35 ENAWQLLIATMLSAQCTDARVNIVTEKLFKKYM-SLEAFARADIRELERDIYSTGFYKNK 93
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ A + ++ G++P S++EL AL G+G K AN++ F+ I VDTHV RI
Sbjct: 94 AKNIIGAAGQIIERHGGEVPESIEELTALDGVGRKTANVIRG-NIFHEPSIVVDTHVKRI 152
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
+L ++T K P + L + LPKE+W+ N ++ G+ +C RP+CG C
Sbjct: 153 SKKL-YLT------KNDDPVKIEHDLMKVLPKEQWILYNIQIITHGRNVCIARRPKCGEC 205
Query: 203 TVSEYCPS 210
T+ CPS
Sbjct: 206 TLQSVCPS 213
>gi|269129033|ref|YP_003302403.1| endonuclease III [Thermomonospora curvata DSM 43183]
gi|268313991|gb|ACZ00366.1| endonuclease III [Thermomonospora curvata DSM 43183]
Length = 246
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ DK + L TA AD ++ +I P F+ KA N+
Sbjct: 52 LLVATILSAQCTDKRVNAVTPTLFAR-YRTAADYAAADREELEKIIRPTGFFRAKADNII 110
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
K+ + ++ G +P +++L+ L G+G K AN+V+ F V GI VDTH R+ R G
Sbjct: 111 KLGQQLCERHGGQVPDRMEDLVELAGVGRKTANVVLG-NAFEVPGITVDTHFGRLARRFG 169
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W +Q + P + + +P++EW ++ ++ G+ IC RP CG+C ++
Sbjct: 170 WTSQ-------TDPVKVEREVAELIPRKEWTILSHRMIWHGRRICHARRPACGVCPLARL 222
Query: 208 CPSAFKESSTSSSKSKK 224
CPS F E T + K
Sbjct: 223 CPS-FGEGPTDPEAAAK 238
>gi|404443430|ref|ZP_11008600.1| endonuclease III [Mycobacterium vaccae ATCC 25954]
gi|403655533|gb|EJZ10385.1| endonuclease III [Mycobacterium vaccae ATCC 25954]
Length = 260
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L + TA +AD +++LI P FY KA ++ +
Sbjct: 60 VATILSAQSTDKRVNLTTPALFKK-YRTALDYAQADRTELEELIRPTGFYRNKASSLIGL 118
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG++P +LDEL+ LPG+G K AN+++ F+V GI VDTH R+ R W
Sbjct: 119 GQALVERFDGEVPKTLDELVTLPGVGRKTANVILG-NAFDVPGITVDTHFGRLVRRWRWT 177
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ P + A+ + + EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 178 AE-------EDPVKVEHAVGELIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCP 230
Query: 210 S 210
S
Sbjct: 231 S 231
>gi|341583175|ref|YP_004763667.1| endonuclease III [Thermococcus sp. 4557]
gi|340810833|gb|AEK73990.1| endonuclease III [Thermococcus sp. 4557]
Length = 238
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 96/187 (51%), Gaps = 8/187 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL-IYPVAFYTRKAC 84
+ L+ ++S +D+V +RL + D E + L V + K
Sbjct: 49 YRTLVHCIISQRMRDEVTYKVWERLFEKYGDIHRIADTPVEEMQEFLRKNGVGLWKTKGE 108
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+ K ++I L KY G +P + EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 109 WIVKASQIILEKYGGKVPDDIKELMKLPGIGRKCANIVLAYG-FGRQAIPVDTHVNRISK 167
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + P + PE+ E L +P E+W+ +N +V G++IC P+ P+C C +
Sbjct: 168 RLG-LAPPRVQ-----PEKVEEYLAELIPYEKWIYVNHAMVDHGKSICRPIGPKCDECPL 221
Query: 205 SEYCPSA 211
E CP A
Sbjct: 222 RELCPYA 228
>gi|333992592|ref|YP_004525206.1| endonuclease III Nth [Mycobacterium sp. JDM601]
gi|333488560|gb|AEF37952.1| endonuclease III Nth [Mycobacterium sp. JDM601]
Length = 248
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 84/148 (56%), Gaps = 8/148 (5%)
Query: 63 KADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMV 122
+AD +++LI P FY KA ++ K+ + + +YDG++P ++DEL+ LPG+G K AN++
Sbjct: 80 QADRTELEELIRPTGFYRNKATSLIKLGQALVERYDGELPDTMDELVRLPGVGRKTANVI 139
Query: 123 MTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINP 182
+ F V GI VDTH R+ R W + P + A+ + ++EW ++
Sbjct: 140 LG-NAFGVPGITVDTHFGRLVRRWDWTAE-------EDPVKVEHAVGELIERKEWTLLSH 191
Query: 183 LLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ G+ +C +P CG+C ++ CPS
Sbjct: 192 RVIFHGRRVCHSRKPACGVCVLARDCPS 219
>gi|15605969|ref|NP_213346.1| endonuclease III [Aquifex aeolicus VF5]
gi|2983139|gb|AAC06742.1| endonuclease III [Aquifex aeolicus VF5]
Length = 232
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L+ A+L++ DKV + + + T + I +A+ +++ + + FY RK
Sbjct: 45 ENAFQLLVMAILAAQESDKVVNKVSKEFFKK-YKTPQDIARANLEELEEDLKHINFYRRK 103
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A +K+ + + Y G++P S+ EL+ LPG+G K ANMV+ G +N+ I VD HVHR+
Sbjct: 104 AKLIKECCEKLIELYKGEVPKSVGELVKLPGVGRKTANMVIG-GAYNLPAIIVDRHVHRV 162
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
R+ +KQK +P++ L +P+E W + + LL+ G+TIC P C C
Sbjct: 163 VERISL-----SKQK--NPDKMEMELSEIVPQELWTKFSLLLLNHGKTICKARNPECEKC 215
Query: 203 TVSEYC 208
+ + C
Sbjct: 216 PILDLC 221
>gi|434394083|ref|YP_007129030.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Gloeocapsa sp. PCC 7428]
gi|428265924|gb|AFZ31870.1| endonuclease III ;DNA-(apurinic or apyrimidinic site) lyase
[Gloeocapsa sp. PCC 7428]
Length = 243
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 96/184 (52%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + L + A AI AD I+ +I P FY KA N++
Sbjct: 47 LLVATILSAQCTDERVNQVTPELFRR-FPDAVAIANADLTEIETIIRPTGFYRNKAKNIQ 105
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+I + +Y G++P+ +++LL LPG+ K AN+V+ + G+ VDTHV R+ RLG
Sbjct: 106 AACRILVQEYGGNVPARMEKLLTLPGVARKTANVVLAHAYDIHVGVTVDTHVKRLSYRLG 165
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
K + P L R LP+E+W + L+ G+ IC P C C +++
Sbjct: 166 LT-------KHTDPLHIERDLMRLLPQEDWENWSIRLIYHGRAICKARNPLCDACVLADL 218
Query: 208 CPSA 211
CPSA
Sbjct: 219 CPSA 222
>gi|325264606|ref|ZP_08131336.1| endonuclease III [Clostridium sp. D5]
gi|324030268|gb|EGB91553.1| endonuclease III [Clostridium sp. D5]
Length = 208
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D + + L Q T E AD ++ I P FY KA N+
Sbjct: 32 LLIATMLSAQCTDARVNIVTKDLFQK-YDTVEKFANADLEELEQDIKPTGFYHTKAKNII 90
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ + ++ G++P SL++L +L G+G K AN++ ++ + VDTHV RI RLG
Sbjct: 91 ACTRALINRFGGEVPRSLEDLTSLAGVGRKTANVIRGNIYYE-PSVVVDTHVKRISKRLG 149
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
K PE+ + L + LPK+ W+ N ++ FG++ICT P+CG C + +Y
Sbjct: 150 LT-------KHEDPEKIEQDLMKELPKDHWILYNIQIITFGRSICTARSPKCGECFLQKY 202
Query: 208 C 208
C
Sbjct: 203 C 203
>gi|256831678|ref|YP_003160405.1| endonuclease III [Jonesia denitrificans DSM 20603]
gi|256685209|gb|ACV08102.1| endonuclease III [Jonesia denitrificans DSM 20603]
Length = 246
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 97/189 (51%), Gaps = 15/189 (7%)
Query: 26 FAVLLSALLSSLTKDKVAD---GALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
F +L++ +LS+ T D + GAL + L AEA D ++DLI P F+ K
Sbjct: 40 FELLIATVLSAQTTDVRVNSVTGALFARFPDALAFAEA----DVHEVEDLIRPTGFFRAK 95
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A ++ I + ++ G++P L+EL+ LPG+G K AN+V+ F V G+ VDTHV R+
Sbjct: 96 AASLVGIGAALVERHHGEVPGDLEELVTLPGVGRKTANVVLG-DAFGVPGVTVDTHVGRL 154
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
R W ++ P + P+ EW ++ ++ G+ +C P CG+C
Sbjct: 155 VRRWQWT-------QSQDPVVVEHQVGALFPRREWTMLSHRIIFHGRRVCHARTPACGVC 207
Query: 203 TVSEYCPSA 211
++ CPSA
Sbjct: 208 PLASLCPSA 216
>gi|260587425|ref|ZP_05853338.1| endonuclease III [Blautia hansenii DSM 20583]
gi|260542292|gb|EEX22861.1| endonuclease III [Blautia hansenii DSM 20583]
Length = 217
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 8/150 (5%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A KAD ++ I P FY KA N+ A+ Y G++P SL++L++LPG+G K
Sbjct: 62 QAFAKADLKELEQDIKPTGFYHNKAKNIIGCAQRICQVYGGEVPRSLEDLVSLPGVGRKT 121
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN++ F+ + VDTHV RI RLG+ K PE+ + L + LPKE W+
Sbjct: 122 ANVIRG-NIFHEPSVVVDTHVKRISKRLGFT-------KEEDPEKIEQDLMKVLPKEHWI 173
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
N ++ FG+ IC P+C C ++EYC
Sbjct: 174 LYNIQIITFGRQICFARSPKCEECFLTEYC 203
>gi|726273|gb|AAA86508.1| ultraviolet N-glycosylase/AP lyase [Micrococcus luteus]
Length = 268
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 15/210 (7%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L Y V E D P F +L++ +LS+ T D + A L A A+
Sbjct: 26 RILAETYPYAVAELDFETP-----FELLVATVLSAQTTDVRVNAATPALFAR-FPDAHAM 79
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A E +++L+ FY KA + ++++ + ++DG++P+ L++L+ALPG+G K A +
Sbjct: 80 AAATEPELQELVRSTGFYRNKASAILRLSQELVGRHDGEVPARLEDLVALPGVGRKTAFV 139
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWL-PKEEWVRI 180
V+ F GI VDTH R+ RLG+ + + P + R R + P +W +
Sbjct: 140 VLG-NAFGQPGITVDTHFGRLARRLGFTDE-------TDPGKGRARRGRPVPPARDWTML 191
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
+ L+ G+ +C RP CG C ++ +CPS
Sbjct: 192 SHRLIFHGRRVCHARRPACGRCPIARWCPS 221
>gi|326510413|dbj|BAJ87423.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 138
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 59/69 (85%)
Query: 156 QKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKES 215
QKT++PEQTR +L++WLPK+EW INPLLVGFGQTICTPLRP+CG C ++ CPSAFKE+
Sbjct: 64 QKTTTPEQTRMSLEKWLPKDEWEPINPLLVGFGQTICTPLRPKCGSCGINTICPSAFKEA 123
Query: 216 STSSSKSKK 224
S+ + K KK
Sbjct: 124 SSPNPKQKK 132
>gi|307352991|ref|YP_003894042.1| endonuclease III [Methanoplanus petrolearius DSM 11571]
gi|307156224|gb|ADN35604.1| endonuclease III [Methanoplanus petrolearius DSM 11571]
Length = 215
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 108/205 (52%), Gaps = 9/205 (4%)
Query: 13 DETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL 72
++T+ + + F +L+ +LS+ T D + + L A A+ +A + ++ +
Sbjct: 20 EDTNLNFLDFDNPFQILVMTILSAQTTDNMVNSVKDDLFSKYPDPA-ALSQAKQEDVETI 78
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
I F+ KA N+ + +KI + + G++P +++EL+ LPG+G K AN+V+ + +G
Sbjct: 79 IKKTGFFRAKAKNIIESSKILCSDFGGEVPRTMEELVTLPGVGRKTANIVLNHAFGIDEG 138
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VDTHV R+ R+G + P + L PK+ W ++N LL+ G+ IC
Sbjct: 139 IAVDTHVKRVSWRIGLT-------DNTDPVKIEMDLTALFPKDAWGKMNYLLISHGRAIC 191
Query: 193 TPLRPRCGMCTVSEYCPSAFKESST 217
T +P C C + ++C F+E ++
Sbjct: 192 TARKPDCERCVIKDFC-RYFREQNS 215
>gi|357058022|ref|ZP_09118879.1| endonuclease III [Selenomonas infelix ATCC 43532]
gi|355374599|gb|EHG21893.1| endonuclease III [Selenomonas infelix ATCC 43532]
Length = 210
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + RL Q +T E I + ++ I+ F+ KA +
Sbjct: 32 FELLIAVILSAQCTDVRVNVVTGRLFQYA-NTPETIAALGQVKLETAIHDCGFFRMKAKH 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + I L +Y G++P+ + L LPG+G K AN+VM++ F+V I VDTHV R+ NR
Sbjct: 91 ILETCHILLQEYGGEVPADFEALQKLPGVGRKTANVVMSVA-FHVPAIAVDTHVFRVANR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +P + + LQ+ +P+E+W + L+ G+ +C +P CG C ++
Sbjct: 150 LRLAV-------GKTPLEVEKGLQKAIPREDWSDAHHWLILHGRQLCKARKPLCGECPLA 202
Query: 206 EYCPSA 211
+ CPS+
Sbjct: 203 QVCPSS 208
>gi|167747301|ref|ZP_02419428.1| hypothetical protein ANACAC_02015 [Anaerostipes caccae DSM 14662]
gi|167653279|gb|EDR97408.1| endonuclease III [Anaerostipes caccae DSM 14662]
Length = 235
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L++ +LS+ D + ++L + + EA +AD ++ IY FY K
Sbjct: 54 ENAWQLLIATMLSAQCTDARVNIVTEKLFKK-YTSLEAFARADIRELERDIYSTGFYKNK 112
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+ A + ++ G++P S++EL AL G+G K AN++ F+ I VDTHV RI
Sbjct: 113 AKNIIGAAGQIIERHGGEVPESIEELTALDGVGRKTANVIRG-NIFHEPSIVVDTHVKRI 171
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
+L ++T K P + L + LPKE+W+ N ++ G+ +C RP+CG C
Sbjct: 172 SKKL-YLT------KNDDPVKIEHDLMKVLPKEQWILYNIQIITHGRNVCIARRPKCGEC 224
Query: 203 TVSEYCPS 210
T+ CPS
Sbjct: 225 TLQSVCPS 232
>gi|452945816|gb|EME51325.1| endonuclease III [Amycolatopsis decaplanina DSM 44594]
Length = 227
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E AV+LSA + + ++V R TA AD A +++ + P F+
Sbjct: 21 PLELLVAVVLSAQTTDVRVNQVTPALFARY-----RTAADYAGADRAELEEYLRPTGFFR 75
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + +YDG++P L +L+ LPG+G K AN+V+ F V GI VDTH
Sbjct: 76 AKANSVMGLGAALVERYDGEVPGKLKDLVTLPGVGRKTANVVLGDA-FGVPGITVDTHFG 134
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW + P + A+ +P++EW ++ + G+ +C +P CG
Sbjct: 135 RLVRRWGWTEE-------EDPVKVEHAVGELIPRKEWTLLSHRTIFHGRRVCHARKPACG 187
Query: 201 MCTVSEYCPSAFKESSTSSSKSKK 224
C +++ CPS F T ++ K
Sbjct: 188 ACPLAKMCPS-FGTGPTGFEEAAK 210
>gi|326329529|ref|ZP_08195852.1| endonuclease III [Nocardioidaceae bacterium Broad-1]
gi|325952696|gb|EGD44713.1| endonuclease III [Nocardioidaceae bacterium Broad-1]
Length = 238
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+ +LS+ T DK + A L TA+ + A ++ L+ P+ F+ K
Sbjct: 42 FECLVVTVLSAQTTDKRVNLASPALFA-AYPTAKEMAAAPREHLEQLVGPLGFFRAKTDA 100
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K++ + + +YDG++PS L++L+ LPG+G K AN+V+ F GI VDTH R+ R
Sbjct: 101 LLKLSAVLVEEYDGEVPSRLEQLVKLPGVGRKTANVVLG-NAFGKPGITVDTHFGRLSRR 159
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW T+ P + + K +W ++ ++ G+ IC +P CG C VS
Sbjct: 160 FGWTTE-------KDPVKVEHEVGALFEKRDWTMLSHHVIWHGRRICHAQKPACGACPVS 212
Query: 206 EYCPSAFKESSTSSSKSKK 224
+ CP A+ E T + K
Sbjct: 213 QLCP-AYGEGPTDPVAAAK 230
>gi|448633657|ref|ZP_21674156.1| endonuclease III [Haloarcula vallismortis ATCC 29715]
gi|445750348|gb|EMA01786.1| endonuclease III [Haloarcula vallismortis ATCC 29715]
Length = 227
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 8/192 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + L + +AE A E + + IY + F+ K
Sbjct: 34 NRLELLIAVVLSAQCTDERVNEVTADLFEK-YQSAEDYAAASEEQLAEDIYGITFHNNKG 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
++ I +I ++DG++P ++ L LPG+G K AN+V+ G V+GI VDTHV R+
Sbjct: 93 GYLQGIGEILTEEHDGEVPDTMSALTDLPGVGRKTANVVLQHGHDIVEGIVVDTHVQRLS 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + PE + L +P EW + LL+ G+ +C C C
Sbjct: 153 RRLGLT-------EKDRPEAIEQDLLDVVPDSEWQQFTHLLIDHGRAVCGARSADCDACG 205
Query: 204 VSEYCPSAFKES 215
+++ CPS +S
Sbjct: 206 LADICPSEKGDS 217
>gi|315652208|ref|ZP_07905203.1| endonuclease III [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485514|gb|EFU75901.1| endonuclease III [Lachnoanaerobaculum saburreum DSM 3986]
Length = 209
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPVA 77
P + FA +LSA + D + + ++ ++++K A+I ++ I+ +
Sbjct: 30 PWQLLFATILSA--------QCTDARVNIVTRDLYKKYDSLEKFASASIVEMERDIHSIG 81
Query: 78 FYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDT 137
FY KA N+ A+ L+ ++G++PS LD LL LPG+G K AN++ F++ I VDT
Sbjct: 82 FYHNKAKNLIACARKLLSDFNGEVPSDLDSLLTLPGVGRKTANVIRG-NIFDMPSIVVDT 140
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HV RI +LG ++ P + L LPK+ W+ N L+ G+TIC R
Sbjct: 141 HVKRITKKLGLT-------ESEDPVKIEFELMEILPKDHWILWNTDLITLGRTICIARRE 193
Query: 198 RCGMCTVSEYCPSA 211
+C +C + E CPSA
Sbjct: 194 KCDICFLREECPSA 207
>gi|254422830|ref|ZP_05036548.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
PCC 7335]
gi|196190319|gb|EDX85283.1| base excision DNA repair protein, HhH-GPD family [Synechococcus sp.
PCC 7335]
Length = 216
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 11/185 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+S ++S T D+V+ ++L + +T +A+ + A I+ LI + RKA
Sbjct: 38 FEQLVSCIISVRTYDEVSLPVSRQLFKRA-NTPQAMSELSVAEIEALIRRSTYAERKAHQ 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQ-GICVDTHVHRICN 144
+ IA+ + YDG +P ++ LLA G+GPK A++ TLG Q I VD HVHR+ N
Sbjct: 97 IWVIAQEIVNHYDGILPCDVNTLLAFKGVGPKCAHL--TLGIACEQPYISVDVHVHRVVN 154
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
R G+V T +PE+T +AL LPK W+ N LL+ FG+ IC P C C +
Sbjct: 155 RWGYVA-------TKTPEKTTQALAAKLPKGLWIETNKLLMPFGKQICKGQYPLCTQCPL 207
Query: 205 SEYCP 209
+ CP
Sbjct: 208 EDSCP 212
>gi|397669156|ref|YP_006510691.1| endonuclease III [Propionibacterium propionicum F0230a]
gi|395142567|gb|AFN46674.1| endonuclease III [Propionibacterium propionicum F0230a]
Length = 205
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L AE + A++ ++++I + Y KA +
Sbjct: 27 FELLVAVVLSAQTTDARVNQVTPELFAR-YPDAEHLAGAEQDDVEEIISSLGLYRSKARS 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A+ + +DG +P SLDEL+ LPG+G K AN+V+ F + GI DTHV R+ NR
Sbjct: 86 LTGLARALVADHDGRVPDSLDELVKLPGVGRKTANVVLGDA-FGIPGITPDTHVIRVSNR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV ++ P+ A+ P EWV + ++ G+ C P C C V
Sbjct: 145 LGWV-------HSTKPDDVERAVGALFPPGEWVVLCHRIIWHGRRCCRARTPACTACPVE 197
Query: 206 EYCPSA 211
+ CPS+
Sbjct: 198 DLCPSS 203
>gi|340795428|ref|YP_004760891.1| endonuclease III [Corynebacterium variabile DSM 44702]
gi|340535338|gb|AEK37818.1| endonuclease III [Corynebacterium variabile DSM 44702]
Length = 243
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+TL Y E D + P +L++ +LS+ DK + L A +
Sbjct: 31 RTLAEEYPDAHCELDYTTP-----LELLVATVLSAQCTDKRVNQVTPALFA-AFPDAVSY 84
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD T++++I P F+ KA N+ ++ + +Y G++P +L EL+ALPG+G K AN+
Sbjct: 85 AGADRETLEEMIRPTGFFRNKASNLIRMGAALVEEYGGEVPGTLPELVALPGVGRKTANV 144
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V G VDTHV R+ RLG T+ + P + + K+EW +
Sbjct: 145 VLG-NAFGVPGFPVDTHVGRLVRRLGLTTE-------TDPVVVEREITAMVEKKEWTMFS 196
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
L+ G+ +C R CG+C ++ CPSA E + + K
Sbjct: 197 HRLIFHGRRVCHSRRAACGVCVLARRCPSAGLEGPMDVADAGK 239
>gi|2506195|sp|P46303.2|UVEN_MICLC RecName: Full=Ultraviolet N-glycosylase/AP lyase; AltName:
Full=Pyrimidine dimer glycosylase; AltName:
Full=UV-endonuclease; Contains: RecName: Full=UV
endonuclease 32 kDa isoform; Contains: RecName: Full=UV
endonuclease 31 kDa isoform
Length = 279
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L Y V E D P F +L++ +LS+ T D + A L A A+
Sbjct: 26 RILAETYPYAVAELDFETP-----FELLVATVLSAQTTDVRVNAATPALFAR-FPDAHAM 79
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A E +++L+ FY KA + ++++ + ++DG++P+ L++L+ALPG+G K A +
Sbjct: 80 AAATEPELQELVRSTGFYRNKASAILRLSQELVGRHDGEVPARLEDLVALPGVGRKTAFV 139
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWL-PKEEWVRI 180
V+ F GI VDTH R+ RLG+ + + P + R R + P +W +
Sbjct: 140 VLG-NAFGQPGITVDTHFGRLARRLGFTDE-------TDPGKGRARRGRPVPPARDWTML 191
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSK 223
+ L+ G+ +C RP CG C ++ +CPS + T +++
Sbjct: 192 SHRLIFHGRRVCHARRPACGRCPIARWCPS-YAAGETDPERAR 233
>gi|407958273|dbj|BAM51513.1| endonuclease III [Synechocystis sp. PCC 6803]
Length = 212
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + A +LSA + +KV QR A A+ D I++LI+ F+
Sbjct: 31 PVQLLVATILSAQCTDERVNKVTPALFQRY-----PDANALAYGDRQEIEELIHSTGFFR 85
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++ + + ++DG++P ++ELL LPG+ K AN+V+ + + G+ VDTHV
Sbjct: 86 NKAKNIQGACRKIVEEFDGEVPQRMEELLTLPGVARKTANVVLAHAFGILAGVTVDTHVK 145
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG K + P + L + +P+ +W + ++ G+ +C +P CG
Sbjct: 146 RLSQRLGLT-------KATDPIRIERDLMKLIPQPDWENFSIHIIYHGRAVCAARKPLCG 198
Query: 201 MCTVSEYCPSA 211
C ++ CPSA
Sbjct: 199 ECQLAHLCPSA 209
>gi|448470459|ref|ZP_21600466.1| endonuclease III [Halorubrum kocurii JCM 14978]
gi|445808023|gb|EMA58100.1| endonuclease III [Halorubrum kocurii JCM 14978]
Length = 227
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + L + T E A + + + I + +Y KA
Sbjct: 34 NRLELLIAVILSAQCTDERVNKVCADLFET-YETPEEYANAPQEELAEAINSITYYNNKA 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
++ +YDG++P ++ EL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 93 KYIRSACADIAEEYDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGIVVDTHVQRLT 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + SP + L +P+E+W + L++ G+ CT + P CG C
Sbjct: 153 RRLGITDE-------ESPTKIERDLLDVVPEEDWQQFTHLMIDHGRATCTAINPDCGDCV 205
Query: 204 VSEYCPS 210
+++ CPS
Sbjct: 206 LADVCPS 212
>gi|417937823|ref|ZP_12581123.1| endonuclease III [Streptococcus infantis SK970]
gi|343392087|gb|EGV04660.1| endonuclease III [Streptococcus infantis SK970]
Length = 209
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
F +L++ +LS+ T D + A L L T +A+ +A E+ I I + Y KA
Sbjct: 31 HFELLVAVMLSAQTTDAAVNKATPALFA-ALPTPQAMAEASESEIASHISRLGLYRNKAK 89
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+KK A+ L +DG +P + +EL +L G+G K AN+VM++G F + VDTHV RIC
Sbjct: 90 FLKKCAQQLLEDFDGQVPQTREELESLAGVGRKTANVVMSVG-FGIPAFAVDTHVERICK 148
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
V +K+++P + + + LP EEW+ + ++ FG+ IC P P C
Sbjct: 149 HHDIV------KKSATPLEVEKRVMDVLPPEEWLAAHQAMIYFGRAICHPKNPEC----- 197
Query: 205 SEYCPSAFKESS 216
E+ P + SS
Sbjct: 198 -EHYPQLYDFSS 208
>gi|374995930|ref|YP_004971429.1| endonuclease III [Desulfosporosinus orientis DSM 765]
gi|357214296|gb|AET68914.1| endonuclease III [Desulfosporosinus orientis DSM 765]
Length = 219
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + L +T E I K + T+++ I + + KA N
Sbjct: 35 FELLIATILSAQCTDERVNLVTASLFSEA-NTPEKIIKLGQTTLENKIRSLGLFHNKAKN 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ + KY+G +P L+ L LPG+G K AN+V + F + I VDTHV R+ +R
Sbjct: 94 ILSACQVLVEKYNGQVPEDLELLKELPGVGRKTANVVAS-NAFGIPAIAVDTHVFRVAHR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + +PE+ + L+ P++ W ++ LL+ G+ IC+ +PRC C VS
Sbjct: 153 LGIAS-------GKTPEKVEDELREVFPQDRWSIVHHLLIFLGRRICSARKPRCEECPVS 205
Query: 206 EYCPSAFKESSTSS 219
C +E S S+
Sbjct: 206 SVCMMYLEELSRSN 219
>gi|309801734|ref|ZP_07695854.1| endonuclease III [Bifidobacterium dentium JCVIHMP022]
gi|308221676|gb|EFO77968.1| endonuclease III [Bifidobacterium dentium JCVIHMP022]
Length = 221
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 99/188 (52%), Gaps = 4/188 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L A+ + AD ++D+I+ + F+ K N
Sbjct: 37 FELLVATVLSAQTTDKRVNMVTPVLFGRFPGPAD-LQAADPEQVEDIIHSIGFHRTKTKN 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ +YDG +P S++EL ALPG+G K AN+V+ F+ G VDTHV R+ R
Sbjct: 96 IIRLSHDLCERYDGTVPDSMEELTALPGVGRKTANVVLG-NAFDKPGFPVDTHVIRVTGR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + + T P + P EW ++ L+ G+T C +P C C ++
Sbjct: 155 LHWRSDWAS--PTPDPVAIEREITACFPPSEWTDLSHRLIMHGRTTCHARKPDCLDCPLN 212
Query: 206 EYCPSAFK 213
+ CPSAFK
Sbjct: 213 DTCPSAFK 220
>gi|320104624|ref|YP_004180215.1| DNA-(apurinic or apyrimidinic site) lyase [Isosphaera pallida ATCC
43644]
gi|319751906|gb|ADV63666.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Isosphaera pallida ATCC 43644]
Length = 314
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
++ +AD A ++ LI FY KA N+ +A+ + + G +P + D L ALPG+G K A
Sbjct: 151 SLARADLAEVETLIRSTGFYHNKALNLIGMARAIVEHHGGVVPDNYDALTALPGVGRKTA 210
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
N+VM + +G+ VDTHV R+ R+G + P + L LP+++WV
Sbjct: 211 NVVMGDAFGRAEGVVVDTHVKRLAFRMGLT-------RHHDPIKIERDLMAILPRDQWVG 263
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESS 228
+ ++ G+ C +PRC C +++ CP ES+TS + + S+
Sbjct: 264 FSHRMIFHGRDTCDARKPRCESCILADLCPKVGVESATSKPRRARFSSA 312
>gi|171742064|ref|ZP_02917871.1| hypothetical protein BIFDEN_01168 [Bifidobacterium dentium ATCC
27678]
gi|171277678|gb|EDT45339.1| endonuclease III [Bifidobacterium dentium ATCC 27678]
Length = 209
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L A+ + AD ++D+I+ + F+ K N
Sbjct: 25 FELLVATVLSAQTTDKRVNMVTPVLFGRFPGPAD-LQAADPEQVEDIIHSIGFHRTKTKN 83
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ +YDG +P S++EL ALPG+G K AN+V+ F+ G VDTHV R+ R
Sbjct: 84 IIRLSHDLCERYDGTVPDSMEELTALPGVGRKTANVVLG-NAFDKPGFPVDTHVIRVTGR 142
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + T P + P EW ++ L+ G+T C +P C C ++
Sbjct: 143 LHWRSD--WASPTPDPVAIEREITACFPPSEWTDLSHRLIMHGRTTCHARKPNCLDCPLN 200
Query: 206 EYCPSAFK 213
+ CPSAFK
Sbjct: 201 DTCPSAFK 208
>gi|448419852|ref|ZP_21580696.1| endonuclease III [Halosarcina pallida JCM 14848]
gi|445674766|gb|ELZ27303.1| endonuclease III [Halosarcina pallida JCM 14848]
Length = 227
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + L + +AEA AD+ + D I + +Y KA
Sbjct: 35 RLELLVAVVLSAQCTDERVNSVTADLFEK-YPSAEAFAAADQEELADDIGSITYYNNKAK 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
++ A + K+ G++P ++ EL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIRSAAADIVEKHGGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + ++ L +P+E+W ++ L + G+ +CT P CG C +
Sbjct: 154 RLGITEEERPERIEED-------LMPVVPEEDWQQLTHLFISHGRAVCTARNPDCGACVL 206
Query: 205 SEYCPSA 211
+ CPS+
Sbjct: 207 EDVCPSS 213
>gi|379706583|ref|YP_005261788.1| endonuclease III [Nocardia cyriacigeorgica GUH-2]
gi|374844082|emb|CCF61144.1| endonuclease III [Nocardia cyriacigeorgica GUH-2]
Length = 226
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 87/153 (56%), Gaps = 8/153 (5%)
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
A A +A+ A +++ I P FY KA + + + L +DG++P ++DEL+ LPGIG K
Sbjct: 53 ARAYAEANRAELEEYIRPTGFYRNKANALIGLGQALLENFDGELPHTMDELVRLPGIGRK 112
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
AN+++ F V GI VDTH R+ R GW T+ P + +A+ + ++EW
Sbjct: 113 TANVILG-NAFGVPGITVDTHFGRLVRRWGWTTE-------EDPVKVEQAVGELIERKEW 164
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ ++ G+ +C +P CG+C +++ CPS
Sbjct: 165 TLLSHRVIFHGRRVCHSRKPACGVCLLAKDCPS 197
>gi|319947405|ref|ZP_08021637.1| endonuclease III [Streptococcus australis ATCC 700641]
gi|417918921|ref|ZP_12562465.1| endonuclease III [Streptococcus australis ATCC 700641]
gi|319746345|gb|EFV98606.1| endonuclease III [Streptococcus australis ATCC 700641]
gi|342835072|gb|EGU69329.1| endonuclease III [Streptococcus australis ATCC 700641]
Length = 209
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 94/175 (53%), Gaps = 8/175 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
F +L++ +LS+ T D + A L + T +A+ A EA I I + Y KA
Sbjct: 31 HFELLVAVMLSAQTTDAAVNKATPALFE-AFPTPQAMAVASEADIAKHISKLGLYRNKAK 89
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+KK A+ L +DG +P + +EL +L G+G K AN+VM++G F + VDTHV RIC
Sbjct: 90 FLKKCAQQLLDNFDGQVPQTREELESLAGVGRKTANVVMSVG-FGIPAFAVDTHVERICK 148
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
V +K+++P + + + LPK EW+ + ++ FG+ IC P P C
Sbjct: 149 HHDIV------KKSATPLEVEKRVMDVLPKSEWLAAHQAMIYFGRAICHPKNPEC 197
>gi|256397952|ref|YP_003119516.1| endonuclease III [Catenulispora acidiphila DSM 44928]
gi|256364178|gb|ACU77675.1| endonuclease III [Catenulispora acidiphila DSM 44928]
Length = 251
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 13/184 (7%)
Query: 27 AVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNM 86
AV+LSA + + +KV QR T + AD ++ LI P F+ KA ++
Sbjct: 55 AVILSAQSTDVGVNKVTPALFQRY-----PTPADLAAADPEELEALIKPTGFFHNKAKSL 109
Query: 87 KKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRL 146
++K ++ + G +P L++L+ LPG+G K AN+V+ F V GI VDTH R+ R
Sbjct: 110 LGMSKSVVSDFGGQVPGRLNDLVKLPGVGRKTANVVLG-DAFGVPGITVDTHFGRLVRRF 168
Query: 147 GWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSE 206
GW P + A+ P+++W ++ L+ G+ +C RP CG C +++
Sbjct: 169 GWTG-------LEDPVKVEHAIGEMFPRKDWTLLSHRLIYHGRRVCHAKRPACGACPIAK 221
Query: 207 YCPS 210
CPS
Sbjct: 222 LCPS 225
>gi|333917945|ref|YP_004491526.1| endonuclease III [Amycolicicoccus subflavus DQS3-9A1]
gi|333480166|gb|AEF38726.1| Endonuclease III [Amycolicicoccus subflavus DQS3-9A1]
Length = 472
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 14/197 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + ++V R +A +A +++ I P FY
Sbjct: 264 PLELAVATILSAQCTDKRVNEVTPALFARY-----QSARDYAEASRTELEEFIRPTGFYR 318
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + + K+DG++P +LDEL+ LPG+G K AN+++ F V G+ VDTH
Sbjct: 319 NKATSLMGLGQGLVEKFDGEVPHTLDELVTLPGVGRKTANVILG-NAFGVPGLTVDTHFG 377
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW + + P + A+ + K+EW ++ ++ G+ +C RP CG
Sbjct: 378 RLVRRWGWTAE-------TDPVKVEFAVADLIEKKEWTLLSHRVIFHGRRVCHARRPACG 430
Query: 201 MCTVSEYCPSAFKESST 217
C ++ CPS F E T
Sbjct: 431 ACVLARDCPS-FGEGPT 446
>gi|308812275|ref|XP_003083445.1| Endonuclease III (ISS) [Ostreococcus tauri]
gi|116055325|emb|CAL57721.1| Endonuclease III (ISS) [Ostreococcus tauri]
Length = 296
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQN---GLHTAEAIDKADEATIKDLIYPVAFYTR 81
RF L++AL+S D+VA A QRL + G T E + K D AT++ + + +
Sbjct: 100 RFQCLVAALMSVQCLDRVALRAFQRLRDDHMSGDVTIERVRKMDRATLESALKTLNLWRA 159
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGW----FNVQGICVDT 137
KA +K+ ++ K+ +P ++ L LPG+G K+A++V ++ + G+ VDT
Sbjct: 160 KAKYIKECSEAIHFKFRDTVPRTVGALKTLPGVGDKLAHLVASVSYDESSAQYAGVVVDT 219
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HV R+ RLGWV K PE+ R LQ + +++W + L+ GQ +C P
Sbjct: 220 HVQRVSRRLGWVG------KCDDPERVRMKLQARVHRDDWEELTLGLIALGQNVCHSRNP 273
Query: 198 RCGMCTVSEYCPSA 211
C C + CP+A
Sbjct: 274 ACDRCPLRTRCPAA 287
>gi|291452913|ref|ZP_06592303.1| endonuclease III [Streptomyces albus J1074]
gi|421745023|ref|ZP_16182897.1| endonuclease III [Streptomyces sp. SM8]
gi|291355862|gb|EFE82764.1| endonuclease III [Streptomyces albus J1074]
gi|406686562|gb|EKC90709.1| endonuclease III [Streptomyces sp. SM8]
Length = 305
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L T E +
Sbjct: 67 RELAEVYPYAHPELDFENP-----FQLLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDL 120
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A +++LI P F+ KA ++ ++ ++ G++P LD+L++LPG+G K A +
Sbjct: 121 AAAPPEELEELIRPTGFFRAKARSLLGLSAALRDRFGGEVPGKLDDLVSLPGVGRKTAFV 180
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ R W + + PE+ A+ PK++W ++
Sbjct: 181 VLG-NAFGVPGITVDTHFGRLVRRWKWTEE-------TDPEKVEAAVAAIFPKKDWTMLS 232
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
++ G+ IC +P CG C ++ CPS + E T K++K
Sbjct: 233 HRVIFHGRRICHSRKPACGACPIAPLCPS-YGEGETDPEKARK 274
>gi|359150463|ref|ZP_09183301.1| endonuclease III [Streptomyces sp. S4]
Length = 305
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L T E +
Sbjct: 67 RELAEVYPYAHPELDFENP-----FQLLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDL 120
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A +++LI P F+ KA ++ ++ ++ G++P LD+L++LPG+G K A +
Sbjct: 121 AAAPPEELEELIRPTGFFRAKARSLLGLSAALRDRFGGEVPGKLDDLVSLPGVGRKTAFV 180
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ R W + + PE+ A+ PK++W ++
Sbjct: 181 VLG-NAFGVPGITVDTHFGRLVRRWKWTEE-------TDPEKVEAAVAAIFPKKDWTMLS 232
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
++ G+ IC +P CG C ++ CPS + E T K++K
Sbjct: 233 HRVIFHGRRICHSRKPACGACPIAPLCPS-YGEGETDPEKARK 274
>gi|134096945|ref|YP_001102606.1| endonuclease III [Saccharopolyspora erythraea NRRL 2338]
gi|291006613|ref|ZP_06564586.1| putative endonuclease III [Saccharopolyspora erythraea NRRL 2338]
gi|133909568|emb|CAL99680.1| putative endonuclease III [Saccharopolyspora erythraea NRRL 2338]
Length = 245
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + ++V +R TAE+ AD A ++++I FY
Sbjct: 21 PLELAVATILSAQCTDKRVNEVTPALFKRYP-----TAESYAGADRAELEEMIRSTGFYR 75
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + ++ G++P+ LDEL+ LPGIG K AN+++ F+V GI VDTH
Sbjct: 76 NKASSLMGLGAQLVERHGGEVPARLDELVKLPGIGRKTANVILG-NAFDVPGITVDTHFG 134
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R W + P + A+ +P++EW ++ ++ G+ +C +P CG
Sbjct: 135 RLVRRWKWTAE-------EDPVKVEHAIGELIPRKEWTMLSHYVIFHGRRVCHARKPACG 187
Query: 201 MCTVSEYCPS 210
C ++ CPS
Sbjct: 188 ACLLAADCPS 197
>gi|425736476|ref|ZP_18854780.1| DNA-(apurinic or apyrimidinic site) lyase [Brevibacterium casei
S18]
gi|425478146|gb|EKU45347.1| DNA-(apurinic or apyrimidinic site) lyase [Brevibacterium casei
S18]
Length = 245
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + A+ L A A+
Sbjct: 28 RILAEVYPNAKCELDFETP-----FQLLIATVLSAQTTD-IRVNAVTPGLFAAFPDAHAL 81
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A+ +++LI FY KA N+ K+A + YDG++P +++EL+ L G+G K AN+
Sbjct: 82 AVANLGEVEELIRSTGFYRAKARNIVKLANDLVDDYDGEVPRTMEELVKLAGVGRKTANV 141
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F+ GI VDTH+ R+ R GW T+ + P + E + P +E ++
Sbjct: 142 VLG-NAFDTPGITVDTHMGRLARRFGWTTE-------TDPVKAEEDIAALFPTKELTLLS 193
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ G+ IC +P CG C + CPS
Sbjct: 194 HRVIFHGRRICHSRKPACGACPLMALCPS 222
>gi|212550403|ref|YP_002308720.1| endonuclease III [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
gi|212548641|dbj|BAG83309.1| endonuclease III [Candidatus Azobacteroides pseudotrichonymphae
genomovar. CFP2]
Length = 217
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 99/183 (54%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +L++ DK + + L N T E + ++E I + I +++ K+
Sbjct: 31 FQLLIAVVLAAQCTDKRVN-LITPTLFNAFPTPEILASSNEDVIYEYIKSISYPKNKSKF 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +AK+ + Y G +PS++ EL+ LPG+G K AN+V ++ F + I VDTHV R+ NR
Sbjct: 90 LLAMAKMLVASYAGQVPSNIKELMKLPGVGRKTANVVASIA-FGIPAIAVDTHVFRVSNR 148
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G T +P QT L + +PK+ W + + L+ G+ IC +P C C +
Sbjct: 149 IGLTNH------TQTPIQTEYVLTKHIPKKLWTKAHHWLILHGRYICIARKPHCYNCGLK 202
Query: 206 EYC 208
E+C
Sbjct: 203 EFC 205
>gi|76802881|ref|YP_330976.1| repair DNA N-glycosylase / DNA-(apurinic or apyrimidinic site)
lyase [Natronomonas pharaonis DSM 2160]
gi|76558746|emb|CAI50339.1| endonuclease III [Natronomonas pharaonis DSM 2160]
Length = 229
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 8/188 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + + L + T E AD+ + I + +Y KA
Sbjct: 34 NRLELLVAVVLSAQCTDERVNTVTETLFEK-YETPEEYASADKEELASDIDSITYYNNKA 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ + K++G++P ++ EL L G+G K AN+V+ G V+GI VDTHV RI
Sbjct: 93 GYLTSACADIVEKHNGEVPDTMSELTDLAGVGRKTANVVLQHGHEVVEGIVVDTHVQRIS 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG T+ P+ + L +P+++W LL+ G+ CT P CG C
Sbjct: 153 RRLGMTTE-------KRPDAIEDDLIDIVPQDDWKEFTHLLISHGRETCTARNPDCGDCI 205
Query: 204 VSEYCPSA 211
+ + CPS+
Sbjct: 206 LEDICPSS 213
>gi|306824244|ref|ZP_07457614.1| endonuclease III [Bifidobacterium dentium ATCC 27679]
gi|304552447|gb|EFM40364.1| endonuclease III [Bifidobacterium dentium ATCC 27679]
Length = 209
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 98/188 (52%), Gaps = 4/188 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L A+ + AD ++D+I+ + F+ K N
Sbjct: 25 FELLVATVLSAQTTDKRVNMVTPVLFGRFPGPAD-LQAADPEQVEDIIHSIGFHRTKTKN 83
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ +YDG +P S++EL ALPG+G K AN+V+ F+ G VDTHV R+ R
Sbjct: 84 IIRLSHDLCERYDGTVPDSMEELTALPGVGRKTANVVLG-NAFDKPGFPVDTHVIRVTGR 142
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + T P + P EW ++ L+ G+T C +P C C ++
Sbjct: 143 LHWRSD--WASPTPDPVAIEREITACFPPSEWTDLSHRLIMHGRTTCHARKPDCLDCPLN 200
Query: 206 EYCPSAFK 213
+ CPSAFK
Sbjct: 201 DTCPSAFK 208
>gi|334137758|ref|ZP_08511184.1| endonuclease III [Paenibacillus sp. HGF7]
gi|333604599|gb|EGL15987.1| endonuclease III [Paenibacillus sp. HGF7]
Length = 209
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 12/191 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E AVLLSA + T +KV Q+ + A +++ ++ I + Y
Sbjct: 28 PFELTIAVLLSAQCTDETVNKVTQTLFQKYKTPEDYLAVPLEELEQD-----IRRIGLYR 82
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++K+ ++ L +YDG IP++ ++L+ LPG+G K AN+V++ F V I VDTHV
Sbjct: 83 NKAKNIQKLCQLVLERYDGQIPTTHEQLVELPGVGRKTANVVVS-NAFGVPAIAVDTHVE 141
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG K S + + L R +P+EEW + L+ FG+ C P+C
Sbjct: 142 RVSKRLGLAG------KDDSVLEVEKKLMRKVPREEWTLTHHRLIFFGRYHCKAQSPKCD 195
Query: 201 MCTVSEYCPSA 211
+C + + CP
Sbjct: 196 ICPLLDICPEG 206
>gi|340755571|ref|ZP_08692247.1| endonuclease III [Fusobacterium sp. D12]
gi|419841933|ref|ZP_14365293.1| endonuclease III [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|421499588|ref|ZP_15946626.1| endonuclease III [Fusobacterium necrophorum subsp. funduliforme Fnf
1007]
gi|313686224|gb|EFS23059.1| endonuclease III [Fusobacterium sp. D12]
gi|386903594|gb|EIJ68403.1| endonuclease III [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|402269556|gb|EJU18886.1| endonuclease III [Fusobacterium necrophorum subsp. funduliforme Fnf
1007]
Length = 213
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + +++ + ++T E + I++ I FY KA N
Sbjct: 31 FELLVAVILSAQCTDVRVNIVTKQMFPH-VNTPEQFANMEVEEIEEWIRSTGFYHNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L Y G++P +D+L+ L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSQQLLELYGGEVPQDMDKLVNLAGVGRKTANVVRGEIWGLADGITVDTHVRRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V + P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGFVQE-------EDPIKIERELMKIVPKKSWIDFSHYLILQGRDTCIARRPRCNQCEIS 202
Query: 206 EYC 208
E+C
Sbjct: 203 EFC 205
>gi|309775704|ref|ZP_07670702.1| endonuclease III [Erysipelotrichaceae bacterium 3_1_53]
gi|308916543|gb|EFP62285.1| endonuclease III [Erysipelotrichaceae bacterium 3_1_53]
Length = 215
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L + T +A+ +A I+D I + Y KA +
Sbjct: 27 FELLVAVVLSAQTTDAAVNKVTPALFE-AFPTPQAMAEAQLQDIEDKIRRIGLYRNKAHS 85
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
++ +++ L +DG +P S+ +L +L G+G K AN+V ++ F++ I VDTHV RI R
Sbjct: 86 IQNLSRSLLDSFDGVVPESMKDLTSLAGVGRKTANVVRSV-CFDIPSIAVDTHVERISKR 144
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + S E + L+R L +E W R + L + FG+ CT P+C C
Sbjct: 145 LGLA------KVQDSVEVVEQKLKRKLKRERWNRAHHLFIFFGRYFCTARNPKCEECPFR 198
Query: 206 EYC 208
E+C
Sbjct: 199 EFC 201
>gi|433632767|ref|YP_007266395.1| Putative endonuclease III Nth (DNA-(apurinic or apyrimidinic site)
lyase) (AP lyase) (AP endonuclease class I)
(Endodeoxyribonuclease (Apurinic or Apyrimidinic))
(Deoxyribonuclease (Apurinic or Apyrimidinic))
[Mycobacterium canettii CIPT 140070010]
gi|432164360|emb|CCK61816.1| Putative endonuclease III Nth (DNA-(apurinic or apyrimidinic site)
lyase) (AP lyase) (AP endonuclease class I)
(Endodeoxyribonuclease (Apurinic or Apyrimidinic))
(Deoxyribonuclease (Apurinic or Apyrimidinic))
[Mycobacterium canettii CIPT 140070010]
Length = 245
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L TA +AD ++ LI P FY KA ++ +
Sbjct: 45 VATILSAQSTDKRVNLTTPALFAR-YRTARDYAQADRTELESLIRPTGFYRNKAASLIGL 103
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG++P+++D+L+ LPG+G K AN+++ F + GI VDTH R+ R W
Sbjct: 104 GQALVERFDGEVPATMDKLVTLPGVGRKTANVILG-NAFGIPGITVDTHFGRLVRRWRWT 162
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
T P + +A+ + ++EW ++ ++ G+ +C RP CG+C +++ CP
Sbjct: 163 T-------AEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHARRPACGVCVLAKDCP 215
Query: 210 S 210
S
Sbjct: 216 S 216
>gi|317058715|ref|ZP_07923200.1| endonuclease III [Fusobacterium sp. 3_1_5R]
gi|313684391|gb|EFS21226.1| endonuclease III [Fusobacterium sp. 3_1_5R]
Length = 213
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + +++ + ++T E + I++ I FY KA N
Sbjct: 31 FELLVAVILSAQCTDVRVNIVTKQMFPH-VNTPEQFANMEVEEIEEWIRSTGFYHNKAKN 89
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK ++ L Y G++P +++L+ L G+G K AN+V W GI VDTHV R+ N
Sbjct: 90 IKKCSQQLLELYHGEVPQDMEQLVNLAGVGRKTANVVRGEIWGLADGITVDTHVRRLSNL 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V K P + L + +PK+ W+ + L+ G+ C RPRC C +S
Sbjct: 150 IGFV-------KEEDPIRIERELMKIVPKKSWIDFSHYLILQGRDTCIARRPRCNQCEIS 202
Query: 206 EYC 208
E+C
Sbjct: 203 EFC 205
>gi|428311864|ref|YP_007122841.1| DNA-(apurinic or apyrimidinic site) lyase [Microcoleus sp. PCC
7113]
gi|428253476|gb|AFZ19435.1| endonuclease III [Microcoleus sp. PCC 7113]
Length = 238
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + L + TA A+ A+ I+ L+ FY KA N++
Sbjct: 40 LLVATILSAQCTDERVNKVTPELFRR-FPTAVALSAANLEEIETLVRSTGFYRNKAKNIQ 98
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
++ +T++ G++P ++ELL LPG+ K AN+V+ + G+ VDTHV R+ NRLG
Sbjct: 99 GACRMIMTEFGGEVPKRMEELLNLPGVARKTANVVLAHAYDIHAGVTVDTHVKRLSNRLG 158
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ P + L R LP+ EW + L+ G+ IC +P C C +++
Sbjct: 159 LTEH-------TDPIRIERDLMRLLPQAEWENWSIRLIYHGRAICQARKPLCDHCALADI 211
Query: 208 CPSA 211
CPSA
Sbjct: 212 CPSA 215
>gi|41615185|ref|NP_963683.1| hypothetical protein NEQ398 [Nanoarchaeum equitans Kin4-M]
gi|40068909|gb|AAR39244.1| NEQ398 [Nanoarchaeum equitans Kin4-M]
Length = 212
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 15/191 (7%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L++ +LS T+++ A L N + + KA I+DLI V Y +KA
Sbjct: 36 FWALIATVLSIRTREEQTIRASLNLY-NKYKDYKNLAKAPIEEIEDLIKNVGLYKQKAKW 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K IA+ ++D + + LPG+G K+ N+ + L N I VD HVHRI NR
Sbjct: 95 IKTIAQ----RWDYNKKCDESFIRNLPGVGRKVGNVYLNLV-CNKPYIAVDVHVHRIANR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGWV KT +PE+T + L + +PKE W ++N +LV FG+ IC P +P+C +C +
Sbjct: 150 LGWV-------KTKTPEETEKQLYKIIPKEYWPKLNHMLVLFGRNICLPSKPKCDICPLD 202
Query: 206 EYCPSAFKESS 216
CP + ++
Sbjct: 203 --CPYKYNKNK 211
>gi|160879113|ref|YP_001558081.1| DNA-(apurinic or apyrimidinic site) lyase [Clostridium
phytofermentans ISDg]
gi|160427779|gb|ABX41342.1| DNA-(apurinic or apyrimidinic site) lyase [Clostridium
phytofermentans ISDg]
Length = 212
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +LL+ +LS+ + DK + L L N + + +A I+D I + Y KA N
Sbjct: 30 WQLLLAIMLSAQSTDKQVNEVLPGLW-NRFSSICQMAEAPVEEIEDQIRSIGLYKSKAKN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
MK+ K + +Y G +P++++EL+ L G+G K A + + +++ G+ VDTHV RI R
Sbjct: 89 MKQCCKQVIDEYGGKVPTTINELVKLSGVGRKSATLFLADA-YDIPGVTVDTHVLRIAKR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW + +P Q + L + LPKE W RIN L+ G+++CT + C C ++
Sbjct: 148 LGWA-------EGKNPVQVEQELMKILPKENWNRINFQLIYHGRSVCTARKCYCERCLLN 200
Query: 206 EYC 208
++C
Sbjct: 201 QWC 203
>gi|428206537|ref|YP_007090890.1| endonuclease III [Chroococcidiopsis thermalis PCC 7203]
gi|428008458|gb|AFY87021.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Chroococcidiopsis thermalis PCC 7203]
Length = 231
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 7/154 (4%)
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
AEA+ KA+ I++LI FY KA N++ +I + +Y G +P S+++LL LPG+ K
Sbjct: 69 AEALAKAEPVEIENLIRSTGFYRNKAKNIQAACRILVAEYGGQVPPSMEQLLRLPGVARK 128
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
AN+V+ + G+ VDTHV R+ RLG K + P L R LP ++W
Sbjct: 129 TANVVLAHAFGINAGVTVDTHVKRLSYRLGLT-------KNTDPIHIERDLIRLLPSDDW 181
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
+ ++ G+ IC P C C +S+ CPSA
Sbjct: 182 ENFSIRIIYHGRAICKARNPACQACLLSDLCPSA 215
>gi|373251319|ref|ZP_09539437.1| DNA-(apurinic or apyrimidinic site) lyase [Nesterenkonia sp. F]
Length = 264
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+TL VY V E D P F +L++ +LS+ T D + L + A A+
Sbjct: 22 RTLAEVYPYAVAELDFENP-----FELLVATVLSAQTTDVRVNAVTPELFRR-YPDAHAL 75
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
ADE + +LI P FY K ++ +A + ++DG++P +D L+ LPG+G K A +
Sbjct: 76 AVADERELAELIRPTGFYQSKTRSLLGLAGALVDRHDGEVPEDVDALVELPGVGRKTAFV 135
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F G+ VDTH R+ RLG+ + P + + ++W ++
Sbjct: 136 VLG-NAFGRPGLTVDTHFGRLARRLGFTEE-------QDPVKVERDVGALFEPKDWTMLS 187
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
L+ G+ +C RP CG C ++ +CPS
Sbjct: 188 HRLIFHGRRVCHARRPACGACPIARWCPS 216
>gi|350568798|ref|ZP_08937196.1| endonuclease III [Propionibacterium avidum ATCC 25577]
gi|348661041|gb|EGY77737.1| endonuclease III [Propionibacterium avidum ATCC 25577]
Length = 241
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ T D+ + L +A+ AD ++ ++ P+ F +A
Sbjct: 46 YQLLVATVLSAQTTDRRVNTVTPTLFSR-WPDPQALASADVGEVETVVAPLGFGPTRAVR 104
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + ++DGD+P LD L+ LPG+G K AN+V+ F V GI DTHV R+ R
Sbjct: 105 LVSMAAKLVDEFDGDVPEGLDSLVTLPGVGRKTANVVLGNA-FGVPGITPDTHVMRVSRR 163
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW ++P + L +WV + L+ G+ C RP CG+C V+
Sbjct: 164 LGWT-------DATTPAKVETDLAGLFDPNDWVMLCHRLIWHGRRRCHSRRPACGVCPVA 216
Query: 206 EYCPSAFKESSTSSSKS 222
E+CPS + E T ++
Sbjct: 217 EWCPS-YGEGPTDPGEA 232
>gi|417932718|ref|ZP_12576056.1| putative endonuclease III [Propionibacterium acnes SK182B-JCVI]
gi|340774354|gb|EGR96841.1| putative endonuclease III [Propionibacterium acnes SK182B-JCVI]
Length = 291
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ T D+ + L N +A+ AD ++ ++ P+ F +A
Sbjct: 96 YQLLVATVLSAQTTDRRVNTVTPTLF-NRWPDPQALAGADIGEVQAIVAPLGFGPTRAVR 154
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + +DG IP LD L+ LPG+G K AN+V+ F V GI DTHV R+ R
Sbjct: 155 LVSMAAKLVDNFDGVIPDDLDSLVTLPGVGRKTANVVLGNA-FGVPGITPDTHVMRVSRR 213
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW ++P + L EWV + L+ G+ C RP CG+C V+
Sbjct: 214 LGWT-------DANTPAKVETDLAELFDPSEWVMLCHRLIWHGRRCCHSRRPACGVCPVA 266
Query: 206 EYCPSAFKESSTSSSKSKK 224
E+CPS F T ++ K
Sbjct: 267 EWCPS-FGAGPTDPEEAAK 284
>gi|452994364|emb|CCQ94051.1| endonuclease III DNA glycosylase/apyrimidinic (AP) lyase
[Clostridium ultunense Esp]
Length = 240
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 9/199 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D+ + + L T E + E + + I + Y K+ N
Sbjct: 51 FELLVATILSAQTTDQKVNEVTKDLFPE-YGTPERLLTLSEEELSEKIKTIGLYKNKSRN 109
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + A+I L ++ G++P +++ELL LPG+G K AN+V++ F V I VDTHV R+ NR
Sbjct: 110 LLRTARIILERHGGEVPRTMEELLLLPGVGRKTANVVLS-NAFGVPAIAVDTHVFRVSNR 168
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G + +T + L +P+ EW + LL+ G+ IC PRC C +
Sbjct: 169 IGLAN-------SEDVLETEKQLMDLIPRNEWSFAHHLLIWHGRRICHARAPRCMECPIF 221
Query: 206 EYCPSAFKESSTSSSKSKK 224
YC A + + KK
Sbjct: 222 PYCRFASQSDAVPKKNDKK 240
>gi|404369469|ref|ZP_10974807.1| endonuclease III [Fusobacterium ulcerans ATCC 49185]
gi|404288245|gb|EFS27500.2| endonuclease III [Fusobacterium ulcerans ATCC 49185]
Length = 376
Score = 106 bits (264), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D V + + + ++T E I+++I F+ KA N
Sbjct: 194 FELLVAVILSAQCTD-VRVNIVTKEMYKKVNTPEGFAALPVEKIEEMIKSTGFFRNKAKN 252
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K ++ L+KY+G+IP +D+L+ L G+G K AN+V W GI VDTHV R+ N
Sbjct: 253 IKLCSQQLLSKYNGEIPKDMDKLIELAGVGRKTANVVRGEVWGLADGITVDTHVKRLTNL 312
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K P + + L + +PK++W+ + L+ G+ C RP+C C +
Sbjct: 313 IGLV-------KNDDPVKIEQELMKIVPKKDWIDFSHYLILQGRDKCIARRPKCSECEIR 365
Query: 206 EYC 208
E+C
Sbjct: 366 EFC 368
>gi|451340412|ref|ZP_21910908.1| Endonuclease III [Amycolatopsis azurea DSM 43854]
gi|449416813|gb|EMD22521.1| Endonuclease III [Amycolatopsis azurea DSM 43854]
Length = 227
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E AV+LSA + + ++V R TA AD A +++ + P F+
Sbjct: 21 PLELLVAVVLSAQTTDVRVNQVTPALFARY-----RTAADYAGADRAELEEYLRPTGFFR 75
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + +YDG++P L +L+ LPG+G K AN+V+ F V GI VDTH
Sbjct: 76 AKANSVLGLGAALVERYDGEVPGKLKDLVTLPGVGRKTANVVLGDA-FGVPGITVDTHFG 134
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW + P + A+ +P++EW ++ + G+ +C +P CG
Sbjct: 135 RLVRRWGWTEE-------EDPVKVEHAVGELIPRKEWTLLSHRTIFHGRRVCHARKPACG 187
Query: 201 MCTVSEYCPS 210
C +++ CPS
Sbjct: 188 ACPLAKMCPS 197
>gi|212696106|ref|ZP_03304234.1| hypothetical protein ANHYDRO_00642 [Anaerococcus hydrogenalis DSM
7454]
gi|325846564|ref|ZP_08169479.1| endonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676735|gb|EEB36342.1| hypothetical protein ANHYDRO_00642 [Anaerococcus hydrogenalis DSM
7454]
gi|325481322|gb|EGC84363.1| endonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 221
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + + + + E K D I+D I Y KA N
Sbjct: 41 FELLVATILSAQCTDVRVNKVTNHMFKYA-NKPEDFSKMDIKEIEDYIKTCGLYKNKAKN 99
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K + + + ++DG++PS++ +L+ LPG+G K AN+VM+ F + I VDTHV R+ NR
Sbjct: 100 IKNASIMLIREFDGEVPSNMKDLIKLPGVGRKTANVVMS-NAFGIDAIAVDTHVQRVSNR 158
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G + T + L++ LPKE+W +++ ++ G+ IC P C C +
Sbjct: 159 IGLA-------HSKDVLNTEKDLRKNLPKEKWSKLHHQIIAHGRKICKARNPLCEECDLR 211
Query: 206 EYCPSAFKE 214
+ C +KE
Sbjct: 212 DLCED-YKE 219
>gi|337747107|ref|YP_004641269.1| hypothetical protein KNP414_02839 [Paenibacillus mucilaginosus
KNP414]
gi|379720962|ref|YP_005313093.1| hypothetical protein PM3016_3078 [Paenibacillus mucilaginosus 3016]
gi|386723570|ref|YP_006189896.1| hypothetical protein B2K_15605 [Paenibacillus mucilaginosus K02]
gi|336298296|gb|AEI41399.1| Nth [Paenibacillus mucilaginosus KNP414]
gi|378569634|gb|AFC29944.1| Nth [Paenibacillus mucilaginosus 3016]
gi|384090695|gb|AFH62131.1| hypothetical protein B2K_15605 [Paenibacillus mucilaginosus K02]
Length = 231
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 113/215 (52%), Gaps = 17/215 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E AVLLSA + T +KV + + + A +++ ++ I + Y
Sbjct: 29 PFELTIAVLLSAQCTDETVNKVTATLFSKYRKPEDYLAVPLEELEQD-----IRRIGLYR 83
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++ + I L KYDG++P ++L+ LPG+G K AN+V++ F V I VDTHV
Sbjct: 84 NKAKNIQALCAILLDKYDGEVPQEHEKLVELPGVGRKTANVVVS-NAFGVPAIAVDTHVE 142
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG+ K S E ++ ++R +P+EEW + L+ FG+ C P+CG
Sbjct: 143 RVSKRLGFAA-----HKDSVLEVEKKLMKR-VPREEWTDTHHRLIFFGRYHCKAQNPKCG 196
Query: 201 MCTVSEYCPSAFKESSTSSS-----KSKKSESSSL 230
C + + C K T+SS K+K S+++++
Sbjct: 197 ECPLLDLCREGKKRMKTNSSRKPIPKAKSSKTATV 231
>gi|310658405|ref|YP_003936126.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[[Clostridium] sticklandii]
gi|308825183|emb|CBH21221.1| DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
[[Clostridium] sticklandii]
Length = 209
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ + D + + L +N +T E I K E + + I + FY K+ N
Sbjct: 28 YELLVATVLSAQSTDVRVNIVTKELFKN-YNTPEKILKLGEEKLMEYIKSIGFYNVKSKN 86
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ + + YD +P +DELL LPG+G K AN+V++ F V I VDTHV R+ R
Sbjct: 87 IIALSHLLIQNYDSQVPDEMDELLKLPGVGRKTANVVLS-NCFGVPAIAVDTHVFRVSTR 145
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG+ + P Q + L + + K+ W + + G+ IC P C +C+V
Sbjct: 146 LGFSDK-------KDPLQVEQDLMKKISKKYWTDAHHAFIFHGRRICKARNPICELCSVQ 198
Query: 206 EYC 208
YC
Sbjct: 199 SYC 201
>gi|294791208|ref|ZP_06756365.1| endonuclease III [Scardovia inopinata F0304]
gi|294457679|gb|EFG26033.1| endonuclease III [Scardovia inopinata F0304]
Length = 210
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ ++S+ T D + L N T +A+ +A ++ +I + F+ KA
Sbjct: 25 FELLIATMMSAQTTDVQVNKVTPELF-NRYPTPQALAQAHVQDVEQIIRTIGFFHTKAQR 83
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
IA LT++DG +P++++EL +LPG+G K AN+V+ F++ G VDTHV R+ R
Sbjct: 84 AIMIAHELLTRFDGQVPATMEELTSLPGVGRKTANVVLG-NAFDLPGFPVDTHVIRVTGR 142
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + T + PE+ + P EW ++ L+ G+ C +P C +C V
Sbjct: 143 LHWRSDWRTAK--GDPEKIETEITAAFPPSEWKDLSHRLINLGRDTCHARKPECLVCPVR 200
Query: 206 EYCPS 210
E CPS
Sbjct: 201 ESCPS 205
>gi|118467497|ref|YP_890407.1| endonuclease III [Mycobacterium smegmatis str. MC2 155]
gi|399990403|ref|YP_006570754.1| DNA-(Apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium smegmatis str. MC2 155]
gi|118168784|gb|ABK69680.1| endonuclease III [Mycobacterium smegmatis str. MC2 155]
gi|399234966|gb|AFP42459.1| DNA-(Apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium smegmatis str. MC2 155]
Length = 259
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L + TA +AD +++LI P FY KA ++ K+
Sbjct: 59 VATILSAQSTDKRVNLTTPALFKK-YRTALDYAQADRTELEELIRPTGFYRNKANSLIKL 117
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG++P +LDEL+ LPG+G K AN+++ F++ GI VDTH R+ R W
Sbjct: 118 GQELVERFDGEVPKTLDELVTLPGVGRKTANVILG-NAFDIPGITVDTHFGRLVRRWRWT 176
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
P + A+ + + EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 177 DH-------EDPVKVEFAVAELIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCP 229
Query: 210 S 210
S
Sbjct: 230 S 230
>gi|374610201|ref|ZP_09682994.1| endonuclease III [Mycobacterium tusciae JS617]
gi|373551232|gb|EHP77861.1| endonuclease III [Mycobacterium tusciae JS617]
Length = 265
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 99/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + A L + TA +AD +++LI FY KA ++ ++
Sbjct: 65 VATILSAQSTDKGVNLATPALFKK-YRTALDYAQADRTELEELIRRTGFYRNKANSLMRL 123
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG +P++L+EL+ LPGIG K AN+++ F + GI VDTH R+ R W
Sbjct: 124 GQELVERFDGQVPATLEELVTLPGIGRKTANVILG-NAFGIPGITVDTHFGRLVRRWHWT 182
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
T+ P + A+ + + EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 183 TE-------EDPVKVEHAIGELIERSEWTELSHRVIFHGRRVCHARKPACGVCVLAKDCP 235
Query: 210 S 210
S
Sbjct: 236 S 236
>gi|302874216|ref|YP_003842849.1| endonuclease III [Clostridium cellulovorans 743B]
gi|307689520|ref|ZP_07631966.1| endonuclease III [Clostridium cellulovorans 743B]
gi|302577073|gb|ADL51085.1| endonuclease III [Clostridium cellulovorans 743B]
Length = 217
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ ++S+ + D + + L +N +T E + E +++ I Y KA N
Sbjct: 38 YELLIATMMSAQSTDVRVNIITEDLFEN-YYTPEQMVTLSEEELQEKIKSCGLYKSKAKN 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++I + KY+G +P S++EL LPG+G K AN+V + F + I VDTHV R+ NR
Sbjct: 97 ILATSRILIEKYNGQVPKSIEELTTLPGVGKKTANVVAS-NVFGIPAIAVDTHVFRVANR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G + +PE+ E L +PKE+W + L+ G+ IC +P C +C +
Sbjct: 156 IGIA-------EGKTPEKVEEQLMEAIPKEKWSDSHHYLIWHGRRICKARKPECEVCNLK 208
Query: 206 EYC 208
C
Sbjct: 209 YEC 211
>gi|403251702|ref|ZP_10918031.1| putative endoIII-related endonuclease [actinobacterium SCGC
AAA027-L06]
gi|402914990|gb|EJX35984.1| putative endoIII-related endonuclease [actinobacterium SCGC
AAA027-L06]
Length = 233
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + L + TA+ + AD I+ L+ FY KA N
Sbjct: 36 FQLLVATVLSAQCTDKRVNQTTPALFKK-YPTAKKMSVADIKDIQRLVKSTGFYRAKAKN 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K ++ + + G +P+ LD+L+ LPG+G K AN+V+ F + GI VDTH R+ R
Sbjct: 95 IKGLSNQIMDDFSGKVPNKLDDLIQLPGVGRKTANVVLGHA-FGIPGITVDTHFGRLSRR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW K P + + + ++EW ++ ++ G+ +C +P CG C+++
Sbjct: 154 FGW-------SKNLDPVKVEFEVGELITQKEWTNLSQRMIWHGRRVCHSRKPACGACSLA 206
Query: 206 EYCPS 210
+ CPS
Sbjct: 207 KLCPS 211
>gi|238926207|ref|ZP_04657967.1| DNA-(apurinic or apyrimidinic site) lyase [Selenomonas flueggei
ATCC 43531]
gi|238885887|gb|EEQ49525.1| DNA-(apurinic or apyrimidinic site) lyase [Selenomonas flueggei
ATCC 43531]
Length = 210
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + RL +T AI +A ++ I+ F+ KA +
Sbjct: 32 FELLIAVILSAQCTDARVNVVTGRLFPKA-NTPAAIAVLGQAELEKEIHDCGFFRMKAKH 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + I L +YDG++P+ + L LPG+G K AN+VM++ F++ I VDTHV R+ NR
Sbjct: 91 IIETCHILLDEYDGEVPADFEALQKLPGVGRKTANVVMSVA-FHMPAIAVDTHVFRVANR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L GT +P + + LQ+ +P+E+W + L+ G+ +C +P C C ++
Sbjct: 150 LRLAV--GT-----TPLEVEKGLQKVIPREDWSDAHHWLILHGRQVCKARKPLCDTCALA 202
Query: 206 EYCPSA 211
+ CPS+
Sbjct: 203 QVCPSS 208
>gi|375092195|ref|ZP_09738480.1| endonuclease III [Helcococcus kunzii ATCC 51366]
gi|374561961|gb|EHR33298.1| endonuclease III [Helcococcus kunzii ATCC 51366]
Length = 220
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 9/174 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
+ +L++ +LS+ T D + + L + T E+I AD I++ I + Y KA N
Sbjct: 36 YELLVAVMLSAQTTDVRVNIVTKDLFKK-YPTPESIMDADIKDIENEIKSIGLYRNKAKN 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+KK+A+I + K+D +PS+ +L +LPG+G K AN+V++ F + I VDTHVHR NR
Sbjct: 95 LKKMAQILVEKFDSKVPSNRKDLESLPGVGRKTANVVLSTA-FGIPAIAVDTHVHRTANR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
+G V T++ T + L + +PKE+W + + +L+ +G+ I T P
Sbjct: 154 IGLV-------DTTNVLDTEKELMKLIPKEKWTKAHHVLIFYGRRISTARNPNI 200
>gi|294792031|ref|ZP_06757179.1| endonuclease III [Veillonella sp. 6_1_27]
gi|294457261|gb|EFG25623.1| endonuclease III [Veillonella sp. 6_1_27]
Length = 211
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + +RL H A+ ++ A ++ LI Y KA N
Sbjct: 32 FELLVAVVLSAQCTDERVNIVTKRLFPELNHPAKMLE-IGVAKLETLIKDCGLYKSKAKN 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I + +Y G++P D+L+ LPG+G K AN+V+++ F I VDTHV R+ NR
Sbjct: 91 LIATCQILVDRYHGEVPREFDQLVELPGVGRKTANVVVSV-LFGTPAIAVDTHVFRVSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +PE+ + LQ+ +PK++W + L+ G+ +C +P C C ++
Sbjct: 150 LKLGI-------AKTPEEMEQKLQKAIPKKDWAAAHHWLIYHGRRVCKARKPLCNECFLN 202
Query: 206 EYCPSAFK 213
CPSA K
Sbjct: 203 HLCPSAGK 210
>gi|434386869|ref|YP_007097480.1| endonuclease III [Chamaesiphon minutus PCC 6605]
gi|428017859|gb|AFY93953.1| endonuclease III [Chamaesiphon minutus PCC 6605]
Length = 231
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 16/211 (7%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+K L P + +D + P + A +LSA + +KV R A +
Sbjct: 21 LKRLYPNATCSLD----YITPVQLLVATILSAQCTDERVNKVTPALFARFPD-----ARS 71
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ AD I++L+ FY KA N++ + + ++DG++P ++ LL LPG+ K AN
Sbjct: 72 MAYADILEIEELVRSTGFYHNKAKNIQGACRKIVEEFDGEVPQLMEHLLTLPGVARKTAN 131
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V + N+QG+ VDTHV R+ N LG + P + + L + +PK +W
Sbjct: 132 VVSAHAFGNIQGVTVDTHVKRLTNLLGLTSH-------QDPIKIEQDLMKLIPKVDWENF 184
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSA 211
+ + + G+ IC +P C C ++E CPSA
Sbjct: 185 SIMTIFHGRAICNARKPNCLECELAELCPSA 215
>gi|406873147|gb|EKD23384.1| hypothetical protein ACD_82C00079G0001, partial [uncultured
bacterium]
Length = 108
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 8/102 (7%)
Query: 107 ELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTRE 166
+LL LPG+G K AN+V+++G F V ICVDTHVHRI NRLG V KT +P++T
Sbjct: 6 DLLELPGVGRKTANLVLSVG-FGVPAICVDTHVHRISNRLGLV-------KTKNPDETEI 57
Query: 167 ALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYC 208
AL++ LP++ W+ N LLV +GQ IC P+ P C C +S C
Sbjct: 58 ALKKILPQKYWLEYNNLLVKWGQNICVPISPHCSKCAISHLC 99
>gi|340759558|ref|ZP_08696126.1| endonuclease III [Fusobacterium varium ATCC 27725]
gi|251835680|gb|EES64219.1| endonuclease III [Fusobacterium varium ATCC 27725]
Length = 376
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D V + + + ++T E I+++I F+ KA N
Sbjct: 194 FELLVAVILSAQCTD-VRVNIVTKEMYKKVNTPEGFAALPVEKIEEMIKSTGFFRNKAKN 252
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K ++ L+KY+G+IP +D+L+ L G+G K AN+V W GI VDTHV R+ N
Sbjct: 253 IKLCSQQLLSKYNGEIPKDMDKLIELAGVGRKTANVVRGEVWGLADGITVDTHVKRLSNL 312
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K P + + L + +PK++W+ + L+ G+ C RP+C C +
Sbjct: 313 IGLV-------KNDDPIKIEQDLMKIVPKKDWIDFSHYLILQGRDKCIARRPKCNECEIK 365
Query: 206 EYCPSA 211
E+C
Sbjct: 366 EFCEHG 371
>gi|338534342|ref|YP_004667676.1| endonuclease III [Myxococcus fulvus HW-1]
gi|337260438|gb|AEI66598.1| endonuclease III [Myxococcus fulvus HW-1]
Length = 210
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 7/151 (4%)
Query: 59 EAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKM 118
+A AD A +++ + P F+ +K +++ +++ L K+ G++P +LD L+ LPG+ K
Sbjct: 63 QAFADADTAALEEDLKPTGFFKQKTKSVQAMSRALLDKFGGEVPRTLDALVTLPGVARKT 122
Query: 119 ANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWV 178
AN+V+ + GI VDTHV R+ RLG K PE E L + +P+E+W
Sbjct: 123 ANVVLNTAFNLPSGIIVDTHVARVSQRLGLT-------KKDKPEAIEEDLMKLVPQEQWT 175
Query: 179 RINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
P V G+ CT +P+C C + + CP
Sbjct: 176 FFGPATVLHGRYTCTAKKPKCETCIIRDACP 206
>gi|260905496|ref|ZP_05913818.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Brevibacterium linens BL2]
Length = 246
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + A+ L + A ++
Sbjct: 29 RILAEVYPNAKCELDFETP-----FQLLIATVLSAQTTD-IRVNAVTPGLFSVFPDAHSL 82
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A+ +++LI+ FY KA N+ K+A + YDG++P+SLD L+ L G+G K AN+
Sbjct: 83 AVANLIEVEELIHSTGFYRAKARNIVKLANELVDTYDGEVPNSLDRLVKLAGVGRKTANV 142
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F+ G+ VDTH+ R+ RLGW + P + + PK++ ++
Sbjct: 143 VLG-NAFDTPGLTVDTHMGRLARRLGWTEE-------DDPVKAEHEIAALFPKKDLTLLS 194
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ G+ IC RP CG C + CPS
Sbjct: 195 HRVIFHGRRICHSRRPACGACPLMALCPS 223
>gi|189218449|ref|YP_001939090.1| endoIII-related endonuclease [Methylacidiphilum infernorum V4]
gi|189185307|gb|ACD82492.1| Predicted EndoIII-related endonuclease [Methylacidiphilum
infernorum V4]
Length = 232
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + +L + TAE A ++ +I+ + FY KA N+K
Sbjct: 53 LLIATILSARCTDEQVNLVTAKLFEK-YKTAEDYASASIEELERMIHSLGFYKTKARNIK 111
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
++ TK++G +P +D+L+ LPG+G K AN+V+ + +GI VDTHV R+ RLG
Sbjct: 112 NTCRLIATKFNGQVPPQMDKLVELPGVGRKTANVVLGNAYGINEGIVVDTHVSRVAYRLG 171
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
TK+K PE+ L R +P+E W + LL+ G+ C P C C ++
Sbjct: 172 L-----TKEK--QPEKIELDLMRCIPQESWTTFSNLLIWHGRKRCKARNPDCLHCELNLL 224
Query: 208 CP 209
CP
Sbjct: 225 CP 226
>gi|15805320|ref|NP_294012.1| endonuclease III [Deinococcus radiodurans R1]
gi|6457961|gb|AAF09870.1|AE001890_2 endonuclease III [Deinococcus radiodurans R1]
Length = 225
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 99/184 (53%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + A L A A+ +A I+ I + Y KA N
Sbjct: 42 FELLVATVLSAQATDVSVNAATPALFA-AYPDAHALSQATADDIEPYIRSIGLYRGKAKN 100
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A++ + ++ G++P+ D ++ALPG G K AN+V++ ++ I VDTHV R+ R
Sbjct: 101 LAALARLLVERHGGEVPNDFDAVVALPGAGRKTANVVLS-NAYDYPAIAVDTHVGRLARR 159
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG Q ++P++ LQ+ P++ WV ++ L+ G+ +C +P+C C ++
Sbjct: 160 LGLSVQ-------TNPDKVEADLQKLFPRDRWVFLHHALILHGRRVCHARKPQCPSCELA 212
Query: 206 EYCP 209
+CP
Sbjct: 213 SFCP 216
>gi|448446645|ref|ZP_21590867.1| endonuclease III [Halorubrum saccharovorum DSM 1137]
gi|445683789|gb|ELZ36179.1| endonuclease III [Halorubrum saccharovorum DSM 1137]
Length = 227
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + L + T E A + + + I + +Y KA
Sbjct: 34 NRLELLIAVILSAQCTDERVNEVCSDLFET-YETPEEYANAPQEELAEAINSITYYNNKA 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
++ K+DG++P ++ EL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 93 KYIRSACADIAEKHDGEVPDTMSELTDLAGVGRKTANVVLQHGHDVVEGIVVDTHVQRLT 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + PE + L +P+ +W + L++ G+ CT + P CG C
Sbjct: 153 RRLGITEE-------ERPESIEQDLLEVVPESDWQQFTHLMIDHGRATCTAINPDCGDCV 205
Query: 204 VSEYCPS 210
+++ CPS
Sbjct: 206 LADVCPS 212
>gi|408501714|ref|YP_006865633.1| endonuclease III [Bifidobacterium asteroides PRL2011]
gi|408466538|gb|AFU72067.1| endonuclease III [Bifidobacterium asteroides PRL2011]
Length = 238
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 98/186 (52%), Gaps = 4/186 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L + A + +A A ++ +I+PV FY KA +
Sbjct: 48 FELLVATVLSAQTTDKRVNSVTPELFERYPDPA-TMAQAQPAELEAIIHPVGFYHAKARH 106
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ + Y G +P +++EL +LPG+G K AN+V+ FN+ G VDTHV R+ R
Sbjct: 107 LLGLSLMLTEDYGGKVPQTMEELTSLPGVGRKTANVVLG-NAFNIPGFPVDTHVTRVTGR 165
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W T + P + + P E+W ++ L+ G+ C +P C C ++
Sbjct: 166 LRWRTD--WRSAHPDPVKIEHEICDCFPPEDWTNLSHRLILHGRATCHARKPDCLHCPLA 223
Query: 206 EYCPSA 211
E CPSA
Sbjct: 224 ETCPSA 229
>gi|403721844|ref|ZP_10944695.1| endonuclease III [Gordonia rhizosphera NBRC 16068]
gi|403206947|dbj|GAB89026.1| endonuclease III [Gordonia rhizosphera NBRC 16068]
Length = 265
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + ++V + TA + +AD ++++I FY
Sbjct: 57 PLELSVATILSAQCTDVRVNQVTPALFAKY-----PTARSYAEADRVELEEMIRSTGFYR 111
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + L +YDG++P++L +L+ LPG G K AN+V+ F V GI VDTH
Sbjct: 112 NKANSIIGLGQALLERYDGEVPNTLKDLVTLPGFGRKTANVVLG-NAFGVPGITVDTHFS 170
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW + + P + A+ + ++EW ++ ++ G+ +C +P CG
Sbjct: 171 RLVRRWGWTAE-------TDPVKIEHAVGELIERKEWTDLSHRVIFHGRRVCHARKPACG 223
Query: 201 MCTVSEYCPS 210
+C +++ CPS
Sbjct: 224 VCILAKECPS 233
>gi|359420242|ref|ZP_09212181.1| endonuclease III [Gordonia araii NBRC 100433]
gi|358243837|dbj|GAB10250.1| endonuclease III [Gordonia araii NBRC 100433]
Length = 254
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + ++ R TAE A+ +++LI P FY
Sbjct: 40 PLELSVATILSAQCTDVRVNQTTPALFARY-----RTAEDYAGANREELEELIRPTGFYR 94
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + + ++DG++P +L EL+ LPG G K AN+V+ F V G+ VDTH
Sbjct: 95 NKANSLIGLGQALVERFDGEVPGTLKELVTLPGFGRKTANVVLG-NAFGVPGLTVDTHFG 153
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R G + + P + A+ +P+ EW + ++ G+ +C +P CG
Sbjct: 154 RLVRRWGLTGE-------TDPVKVETAIAELIPRREWTDYSHRVIFHGRRVCHSRKPACG 206
Query: 201 MCTVSEYCPSAFKESSTSSSKSKK 224
+C V+ CPS + E T + K
Sbjct: 207 VCVVARDCPS-YGEGPTEKEAAAK 229
>gi|256828392|ref|YP_003157120.1| endonuclease III [Desulfomicrobium baculatum DSM 4028]
gi|256577568|gb|ACU88704.1| endonuclease III [Desulfomicrobium baculatum DSM 4028]
Length = 222
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 8/182 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D + +L T E + AD A I+ +I F+ KA N+
Sbjct: 36 LLVATILSAQCTDARVNMVTPKLFAT-WRTVEQMATADPAQIESVIRSTGFFRNKAKNLH 94
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
A +T + G +P +++E+L L G+ K AN+V++ + GI VDTHV RI RLG
Sbjct: 95 ASAVRIVTHFGGQVPRTMEEMLTLAGVARKTANVVLSNAYGVHAGIAVDTHVKRISFRLG 154
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
Q ++P++ + L + P+E W +N LV FG+ +C +P C C +++
Sbjct: 155 LTRQ-------TNPDKVEQDLLKLFPQESWGAVNHYLVLFGREVCAARKPLCDACELADL 207
Query: 208 CP 209
CP
Sbjct: 208 CP 209
>gi|313896540|ref|ZP_07830089.1| endonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974725|gb|EFR40191.1| endonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
Length = 209
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + RL +T EAI ++ +++ I+ F+ KA +
Sbjct: 32 FELLVAVILSAQCTDARVNIVTSRLFPRA-NTPEAIAGLGQSQLEEAIHDCGFFRMKAKH 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + I L +Y G++P+ + L LPG+G K AN+VM++ F++ I VDTHV R+ NR
Sbjct: 91 IIETCDILLREYGGEVPADFEALQRLPGVGRKTANVVMSVA-FHIPAIAVDTHVFRVSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +P + + LQ+ +P+ +W + L+ G+ +C +P CG C ++
Sbjct: 150 LHLAV-------GKTPLEVEKGLQKVIPRADWSDAHHWLILHGRRLCKARKPLCGQCPIA 202
Query: 206 EYCPSA 211
CPSA
Sbjct: 203 PVCPSA 208
>gi|374340010|ref|YP_005096746.1| endonuclease III [Marinitoga piezophila KA3]
gi|372101544|gb|AEX85448.1| endonuclease III [Marinitoga piezophila KA3]
Length = 210
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D + L + T K + +++ I V Y K+ N
Sbjct: 32 FELLIAVMLSAQTTDNQVNKVTPELFKR-FKTPYDFAKLNPEELEEYIKGVGLYKTKSKN 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ K +I + KY+G+IP + +EL+ LPG+G K AN+++++ F I VDTHV R+ NR
Sbjct: 91 IIKTCQILVEKYNGEIPQTREELMELPGVGRKTANVILSVA-FGKDAIAVDTHVFRVANR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G K +T E L + +PK W + + L+ G+ IC P+C +C +
Sbjct: 150 IGLANAKDVK-------KTEEDLMKVIPKNLWGQAHHWLIYHGRNICKARNPKCDICPIK 202
Query: 206 EYC 208
E C
Sbjct: 203 ELC 205
>gi|320529090|ref|ZP_08030182.1| endonuclease III [Selenomonas artemidis F0399]
gi|402303546|ref|ZP_10822639.1| endonuclease III [Selenomonas sp. FOBRC9]
gi|320138720|gb|EFW30610.1| endonuclease III [Selenomonas artemidis F0399]
gi|400378384|gb|EJP31241.1| endonuclease III [Selenomonas sp. FOBRC9]
Length = 209
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + RL +T EAI ++ +++ I+ F+ KA +
Sbjct: 32 FELLVAVILSAQCTDARVNIVTSRLFPRA-NTPEAIAGLGQSQLEEAIHDCGFFRMKAKH 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + I L +Y G++P+ + L LPG+G K AN+VM++ F++ I VDTHV R+ NR
Sbjct: 91 IIETCDILLREYGGEVPADFEALQRLPGVGRKTANVVMSVA-FHIPAIAVDTHVFRVSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +P + + LQ+ +P+ +W + L+ G+ +C +P CG C ++
Sbjct: 150 LHLAV-------GKTPLEVEKGLQKVIPRADWSDAHHWLILHGRRLCKARKPLCGQCPIA 202
Query: 206 EYCPSA 211
CPSA
Sbjct: 203 PVCPSA 208
>gi|348172927|ref|ZP_08879821.1| putative endonuclease III [Saccharopolyspora spinosa NRRL 18395]
Length = 275
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ DK + L + TA AD ++++I FY K ++ +
Sbjct: 56 VATILSAQCTDKRVNEVTPALFKK-YPTAADYASADRTELEEMIRSTGFYRNKTASLMGL 114
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ KYDG++P L++L+ LPGIG K AN+++ F+V GI VDTH R+ R GW
Sbjct: 115 GAALVEKYDGEVPGKLEQLVKLPGIGRKTANVILG-NAFDVPGITVDTHFGRLVRRWGWT 173
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ P + A+ +P++EW ++ ++ G+ +C +P CG C +++ CP
Sbjct: 174 DE-------EDPVKVEHAIGELIPRKEWTMLSHRVIFHGRRVCHARKPACGACLLAKDCP 226
Query: 210 S 210
S
Sbjct: 227 S 227
>gi|219852559|ref|YP_002466991.1| endonuclease III [Methanosphaerula palustris E1-9c]
gi|219546818|gb|ACL17268.1| endonuclease III [Methanosphaerula palustris E1-9c]
Length = 212
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 17 SSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPV 76
+ LP F VL+ +LS+ T D+ D L T + AD ++ +I+
Sbjct: 22 TPLPFFHSPFQVLILTILSAQTTDQAVDKIRPALFAR-YPTPADLAAADVHEVEKIIHST 80
Query: 77 AFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVD 136
FY KA ++ A + + ++ G IPS+++ELL LPG+G K AN+++ GI VD
Sbjct: 81 GFYRVKARHIISTAAMLVNRFGGTIPSTMEELLLLPGVGRKTANILLFHALGINAGIAVD 140
Query: 137 THVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLR 196
THV R+ RLG T+ + + L P+E W + +++ G+ CT +
Sbjct: 141 THVKRLAGRLGLTTR-------IEQDLIEQDLMNLYPQERWGDLTDIMIAHGRRCCTAIN 193
Query: 197 PRCGMCTVSEYCP 209
P CG+C VS CP
Sbjct: 194 PHCGVCPVSNVCP 206
>gi|322389116|ref|ZP_08062680.1| endonuclease III [Streptococcus parasanguinis ATCC 903]
gi|321144200|gb|EFX39614.1| endonuclease III [Streptococcus parasanguinis ATCC 903]
Length = 207
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 8/175 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
F +L++ +LS+ T D + A L T +A+ A EA I I + Y KA
Sbjct: 31 HFELLVAVMLSAQTTDAAVNKATPGLFA-AFPTPQAMAAASEADIAKHISKLGLYRNKAK 89
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+KK A+ L +DG +P + +EL +L G+G K AN+VM++G F + VDTHV RIC
Sbjct: 90 FLKKCAQQLLDNFDGQVPQTREELESLAGVGRKTANVVMSVG-FGIPAFAVDTHVERICK 148
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
V +K+++P + + + LPK EW+ + ++ FG+ IC P P C
Sbjct: 149 HHDIV------KKSATPLEVEKRVMDVLPKSEWLAAHQAMIYFGRAICHPKNPEC 197
>gi|448355817|ref|ZP_21544566.1| endonuclease III [Natrialba hulunbeirensis JCM 10989]
gi|445634525|gb|ELY87704.1| endonuclease III [Natrialba hulunbeirensis JCM 10989]
Length = 227
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 95/191 (49%), Gaps = 8/191 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + + L + E + +E +DL + +Y KA
Sbjct: 35 RLELLIAVILSAQCTDERVNKETKHLFEKYDGPEEYANAPEEELAEDL-NSITYYNSKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+K +I L ++DG++P ++DEL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIKDSCEIILEEHDGEVPDTMDELTELSGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE + L +P W + L + G+ CT P C C +
Sbjct: 154 RLGLTEE-------EYPEPIEQELMELVPDGYWQQFTHLCIDHGRATCTARNPDCSDCVL 206
Query: 205 SEYCPSAFKES 215
++ CPS +S
Sbjct: 207 ADICPSEKGDS 217
>gi|422339740|ref|ZP_16420697.1| endonuclease III [Fusobacterium nucleatum subsp. polymorphum F0401]
gi|355370583|gb|EHG17963.1| endonuclease III [Fusobacterium nucleatum subsp. polymorphum F0401]
Length = 162
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 55 LHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGI 114
++T E D I++ I F+ KA N+KK ++ L KY+G+IP +D+L L G+
Sbjct: 5 VNTPEQFANMDLEEIENYIKSTGFFRNKAKNIKKCSEQLLEKYNGEIPKDMDKLTELAGV 64
Query: 115 GPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPK 174
G K AN+V W GI VDTHV R+ N +G V + P + L + +PK
Sbjct: 65 GRKTANVVRGEVWGLADGITVDTHVKRLTNLIGLVD-------SEDPIKIELELMKIVPK 117
Query: 175 EEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSS 219
+ W+ + L+ G+ C RPRC C +S+YC K+ S +
Sbjct: 118 KSWIVFSHYLILHGRATCIARRPRCSECEISKYCNYGIKKLSNDN 162
>gi|262200522|ref|YP_003271730.1| endonuclease III [Gordonia bronchialis DSM 43247]
gi|262083869|gb|ACY19837.1| endonuclease III [Gordonia bronchialis DSM 43247]
Length = 248
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 100/190 (52%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + ++V R TA+ AD ++++I FY
Sbjct: 41 PLELSVATILSAQCTDVRVNQVTPALFARY-----RTAQDYAGADRTELEEMIRTTGFYR 95
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + + ++DG++P +L+EL++LPG G K AN+V+ F V GI VDTH
Sbjct: 96 NKANSIIGLGQALIERFDGEVPHTLNELVSLPGFGRKTANVVLG-NAFGVPGITVDTHFG 154
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R W T+ + P + A+ + ++EW ++ ++ G+ +C +P CG
Sbjct: 155 RLVRRWEWTTE-------TDPVKVEHAVGELIERKEWTDLSHRVIFHGRRVCHARKPACG 207
Query: 201 MCTVSEYCPS 210
+C +++ CPS
Sbjct: 208 VCILAKDCPS 217
>gi|354557733|ref|ZP_08976991.1| endonuclease III [Desulfitobacterium metallireducens DSM 15288]
gi|353550527|gb|EHC19964.1| endonuclease III [Desulfitobacterium metallireducens DSM 15288]
Length = 219
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 112/218 (51%), Gaps = 14/218 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
K LE +Y E + S P F +L++ +LS+ D+ + +RL Q T +
Sbjct: 13 FKLLEEMYPDAHCELNFSNP-----FQLLIATILSAQATDRKVNQITERLFQQYT-TPQK 66
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ + + ++ I + Y KA N+ +I + K+ GD+P + +EL LPG+G K AN
Sbjct: 67 LLRLTQEELEQSIKEIGLYHNKAKNILATCRILVEKHQGDVPRNFEELTELPGVGRKTAN 126
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V++ F + + VDTHV R+ NRLG T +P+ + L+ + +++W
Sbjct: 127 VVLS-NAFGIPALAVDTHVLRVSNRLGLAT-------GKNPDLVEDQLKSLISRKKWSLA 178
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTS 218
+ LL+ G+ +C RP C +C + +C A ++S++
Sbjct: 179 HHLLIWHGRRMCHAKRPECLLCPLQPFCSEAQSKASSA 216
>gi|350566513|ref|ZP_08935175.1| endonuclease III [Peptoniphilus indolicus ATCC 29427]
gi|348662696|gb|EGY79348.1| endonuclease III [Peptoniphilus indolicus ATCC 29427]
Length = 216
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 98/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + + L + +T E + IK I P FY KA N
Sbjct: 34 FELLIATILSAQCTDVRVNAVTEELFKVA-NTPEQFVEMGLEEIKRWIKPCGFYNNKAKN 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ +++Y+ ++P+ ++EL+ LPG+G K AN+V + F V I VDTHV R+ NR
Sbjct: 93 ILSASEVLISEYNSEVPNIIEELMQLPGVGRKTANVVAS-NCFGVPAIAVDTHVFRLSNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V + E+T ALQ+ + K W + L+ G+ +C +P C C +
Sbjct: 152 IGFVNEKDV-------EKTELALQKKIDKSRWTLAHHTLIFHGRRVCKARKPLCENCNII 204
Query: 206 EYC 208
+YC
Sbjct: 205 DYC 207
>gi|383826021|ref|ZP_09981163.1| endonuclease III Nth [Mycobacterium xenopi RIVM700367]
gi|383333783|gb|EID12231.1| endonuclease III Nth [Mycobacterium xenopi RIVM700367]
Length = 251
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 101/181 (55%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L TA +AD +++LI P FY KA + ++
Sbjct: 51 VATILSAQSTDKRVNLTTPALFAR-YKTALDYAQADREELENLIRPTGFYRNKATALIRL 109
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG++P++++EL++LPGIG K AN+++ F + GI VDTH R+ R W
Sbjct: 110 GQELVERFDGEVPATMNELVSLPGIGRKTANVILG-NAFGIPGITVDTHFLRLVRRWRWT 168
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
++ + P + A+ + + EW+ ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 169 SE-------TDPVKVEHAVGELIERSEWIDLSHRVIFHGRRVCHARKPACGVCVLAKDCP 221
Query: 210 S 210
S
Sbjct: 222 S 222
>gi|163841494|ref|YP_001625899.1| endonuclease III [Renibacterium salmoninarum ATCC 33209]
gi|162954970|gb|ABY24485.1| endonuclease III [Renibacterium salmoninarum ATCC 33209]
Length = 274
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 10/199 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T D V + +L ++ +A+ ++++I P F+ KA +
Sbjct: 42 FELLVATVLSAQTTD-VRVNQISPMLFRRYPDPVSLSQAESLELEEIIRPTGFFRAKAKS 100
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +A + +YDG +P +LDEL+ LPG+G K AN+V+ F + GI VDTH R+ R
Sbjct: 101 LIGLANRIVDEYDGVVPGTLDELITLPGVGRKTANVVLG-NAFGIPGITVDTHFGRLARR 159
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
GW + P + + +W ++ +V G+ +C +P CG CTV+
Sbjct: 160 FGWT-------DSEDPGVVESDVGELIEPVDWTMLSHRVVFHGRRVCHSRKPACGACTVA 212
Query: 206 EYCPSAFKESSTSSSKSKK 224
CPS + T K+KK
Sbjct: 213 SLCPS-YGMGETDPEKAKK 230
>gi|317123642|ref|YP_004097754.1| DNA-(apurinic or apyrimidinic site) lyase [Intrasporangium calvum
DSM 43043]
gi|315587730|gb|ADU47027.1| endonuclease III; DNA-(apurinic or apyrimidinic site) lyase
[Intrasporangium calvum DSM 43043]
Length = 244
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T D V + ++ TA AD ++ +I P F+ K+ ++
Sbjct: 49 LLVATILSAQTTD-VGVNKVTPIVFAKYRTAADYAAADRTELETIIQPTGFFRAKSDSLI 107
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
K+ + + ++DG++P L +L+ LPG+G K AN+V+ FNV GI VDTH R+ R G
Sbjct: 108 KLGQALVERFDGEVPGRLKDLVTLPGVGRKTANVVLG-NAFNVPGITVDTHFGRLVRRFG 166
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W + P + A+ + +W ++ +++ G+ C +P CG C V+ +
Sbjct: 167 WTAE-------EDPVKVEHAVGALFLRRDWTMLSHVVIFHGRRTCHAKKPACGACPVARW 219
Query: 208 CPS 210
CPS
Sbjct: 220 CPS 222
>gi|222479385|ref|YP_002565622.1| endonuclease III [Halorubrum lacusprofundi ATCC 49239]
gi|222452287|gb|ACM56552.1| endonuclease III [Halorubrum lacusprofundi ATCC 49239]
Length = 227
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 95/187 (50%), Gaps = 8/187 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + L + T E A + + + I + +Y KA
Sbjct: 34 NRLELLIAVILSAQCTDERVNKVCADLFET-YETPEDYANAPQEELAEAINSITYYNNKA 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
++ ++DG++P ++ EL L G+G K AN+V+ G V+GI VDTHV RI
Sbjct: 93 KYIRSACADIAEQHDGEVPDTMSELTELAGVGRKTANVVLQHGHDVVEGIVVDTHVQRIT 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RL + SP++ + L +P+E+W + L++ G+ CT + P CG C
Sbjct: 153 RRLAITEE-------ESPKKIEQDLLDVVPEEDWQQFTHLMIDHGRATCTAINPDCGDCV 205
Query: 204 VSEYCPS 210
+++ CPS
Sbjct: 206 LADVCPS 212
>gi|373107960|ref|ZP_09522251.1| endonuclease III [Stomatobaculum longum]
gi|371650126|gb|EHO15594.1| endonuclease III [Stomatobaculum longum]
Length = 212
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+LL+ +LS+ D + + L Q+ E I A + I+ IY FY KA N++
Sbjct: 35 LLLATILSAQCTDARVNQVTKVLYQH-YPRLEDIAAASQEEIEREIYTTGFYHNKARNLR 93
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
A++ L ++DG +P ++ LL LPG+G K AN+++ + I VDTHV R+ RLG
Sbjct: 94 ACAQVLLLRFDGTVPDEMEALLTLPGVGRKTANLILG-EIYGKPSIVVDTHVKRVSRRLG 152
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
VT + P + L+ LP+ W+ N L+ G+T CT P C C +S+
Sbjct: 153 LVT-------ATDPTKVEAELKTVLPESFWILWNTRLMALGRTYCTAKAPNCADCYLSDL 205
Query: 208 CP 209
CP
Sbjct: 206 CP 207
>gi|269798164|ref|YP_003312064.1| endonuclease III [Veillonella parvula DSM 2008]
gi|282850393|ref|ZP_06259772.1| endonuclease III [Veillonella parvula ATCC 17745]
gi|416998769|ref|ZP_11939438.1| endonuclease III [Veillonella parvula ACS-068-V-Sch12]
gi|269094793|gb|ACZ24784.1| endonuclease III [Veillonella parvula DSM 2008]
gi|282579886|gb|EFB85290.1| endonuclease III [Veillonella parvula ATCC 17745]
gi|333976922|gb|EGL77781.1| endonuclease III [Veillonella parvula ACS-068-V-Sch12]
Length = 211
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + +RL H A+ ++ A ++ LI Y KA N
Sbjct: 32 FELLVAVVLSAQCTDERVNIVTKRLFPELNHPAKMLE-IGVAKLETLIKDCGLYKSKAKN 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I + +Y G++P D+L+ LPG+G K AN+V+++ F I VDTHV R+ NR
Sbjct: 91 LIATCQILVDRYHGEVPREFDQLVELPGVGRKTANVVVSV-LFGTPAIAVDTHVFRVSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +PE+ + LQ+ +PK++W + L+ G+ +C +P C C ++
Sbjct: 150 LKLGI-------AKTPEEMEQKLQKAIPKKDWAAAHHWLIYHGRRLCKARKPLCNECFLN 202
Query: 206 EYCPSAFK 213
CPSA K
Sbjct: 203 HLCPSAGK 210
>gi|300790634|ref|YP_003770925.1| endonuclease III [Amycolatopsis mediterranei U32]
gi|384154169|ref|YP_005536985.1| endonuclease III [Amycolatopsis mediterranei S699]
gi|399542512|ref|YP_006555174.1| endonuclease III [Amycolatopsis mediterranei S699]
gi|299800148|gb|ADJ50523.1| endonuclease III [Amycolatopsis mediterranei U32]
gi|340532323|gb|AEK47528.1| endonuclease III [Amycolatopsis mediterranei S699]
gi|398323282|gb|AFO82229.1| endonuclease III [Amycolatopsis mediterranei S699]
Length = 227
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 14/209 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L+ VY E D + P E AV+LSA + + + V +R TA
Sbjct: 3 RCLDDVYPDAHCELDFTTP-LELLVAVVLSAQTTDVRVNLVTPALFKRY-----RTAADY 56
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD A +++ + FY KA ++ + + ++DG++P+ L++L+ LPG+G K AN+
Sbjct: 57 AGADRAELEEYLRSTGFYRAKANSVMGLGAALVERFDGEVPAKLEDLVTLPGVGRKTANV 116
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F+V GI VDTH R+ R GW + P + A+ +P++EW ++
Sbjct: 117 VLG-NAFDVPGITVDTHFGRLVRRWGWTAE-------EDPVKVEHAIGELIPRKEWTMLS 168
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
++ G+ +C +P CG C ++ CPS
Sbjct: 169 HRVIFHGRRVCHAKKPACGACPLARDCPS 197
>gi|409728373|ref|ZP_11271240.1| endonuclease III [Halococcus hamelinensis 100A6]
gi|448722930|ref|ZP_21705458.1| endonuclease III [Halococcus hamelinensis 100A6]
gi|445788597|gb|EMA39306.1| endonuclease III [Halococcus hamelinensis 100A6]
Length = 227
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 97/192 (50%), Gaps = 8/192 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
RF +L++ +LS+ D+ + + L + + EA A + + + + + +Y KA
Sbjct: 35 RFELLVAVILSAQCTDERVNETTETLFET-YPSPEAFANAPQDELAEALNSITYYNNKAS 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+++ A++ + ++DG++P ++ +L LPG+G K AN+V+ V+G+ VDTHV R+
Sbjct: 94 YIRESAQLVVDEHDGEVPDTMGDLTELPGVGRKTANVVLQHAHDVVEGVVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE L P+E W L + G+ CT P C C +
Sbjct: 154 RLGLTEE-------HRPETIERELMELFPEERWQASTHLFISHGRETCTARNPDCEDCVL 206
Query: 205 SEYCPSAFKESS 216
CPS+ +S+
Sbjct: 207 EAICPSSKLDSA 218
>gi|375084054|ref|ZP_09731064.1| endonuclease III [Thermococcus litoralis DSM 5473]
gi|374741220|gb|EHR77648.1| endonuclease III [Thermococcus litoralis DSM 5473]
Length = 237
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 10/188 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP--VAFYTRKA 83
+ L+ ++S +D+V + L + E I +++ + V + K
Sbjct: 48 YKTLIHCIISQRMRDEVTYKVWRELFKK-YKNIETIANTPIEEMQEFLRKNGVGLWKTKG 106
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ + ++I L +Y G +P ++EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 107 EWIVRASQIILEEYGGKVPDKIEELMKLPGIGRKCANIVLAYG-FGKQTIPVDTHVNRIS 165
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P SPE+ E L++ +PK+ W+ +N +V G+ IC P+ P+C C
Sbjct: 166 KRLG-LAPPKV-----SPEKVEEYLKQLIPKDLWIYVNHAMVDHGKRICKPINPKCTECP 219
Query: 204 VSEYCPSA 211
+ + CP A
Sbjct: 220 LQDLCPYA 227
>gi|312867168|ref|ZP_07727378.1| endonuclease III [Streptococcus parasanguinis F0405]
gi|311097297|gb|EFQ55531.1| endonuclease III [Streptococcus parasanguinis F0405]
Length = 207
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 93/175 (53%), Gaps = 8/175 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
F +L++ +LS+ T D + A L T +A+ A EA I I + Y KA
Sbjct: 31 HFELLVAVMLSAQTTDAAVNKATPGLFA-AFPTPQAMAAASEADIAKHISKLGLYRNKAK 89
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+KK A+ L +DG +P + +EL +L G+G K AN+VM++G F + VDTHV RIC
Sbjct: 90 FLKKCAQQLLDNFDGKVPQTREELESLAGVGRKTANVVMSVG-FGIPAFAVDTHVERICK 148
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRC 199
V +K+++P + + + LPK EW+ + ++ FG+ IC P P C
Sbjct: 149 HHDIV------KKSATPLEVEKRVMDVLPKSEWLAAHQAMIYFGRAICHPKNPEC 197
>gi|322369514|ref|ZP_08044079.1| endonuclease III [Haladaptatus paucihalophilus DX253]
gi|320551246|gb|EFW92895.1| endonuclease III [Haladaptatus paucihalophilus DX253]
Length = 228
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 98/188 (52%), Gaps = 8/188 (4%)
Query: 24 RRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKA 83
R +L++ +LS+ D+ + + L + + E AD + + + + +Y KA
Sbjct: 34 NRLELLIAVMLSAQCTDERVNKETEHLFEK-YESVEDYANADVDELAEDLNSITYYNNKA 92
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ + ++DG++P ++ EL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 93 KWIHSACGTIIEEHDGEVPDTMSELTDLTGVGRKTANVVLQHGHDVVEGIVVDTHVQRLS 152
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG T++KT P++ L ++P+E+W + L + G+ CT P CG C
Sbjct: 153 RRLGL-----TEEKT--PQKIESDLMTFVPEEDWQWLTHLFISHGRATCTARNPDCGDCI 205
Query: 204 VSEYCPSA 211
+ + CPS+
Sbjct: 206 LEDICPSS 213
>gi|294793896|ref|ZP_06759033.1| endonuclease III [Veillonella sp. 3_1_44]
gi|294455466|gb|EFG23838.1| endonuclease III [Veillonella sp. 3_1_44]
Length = 211
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + +RL H A+ ++ A ++ LI Y KA N
Sbjct: 32 FELLVAVVLSAQCTDERVNIVTKRLFPELNHPAKMLE-IGVAKLETLIKDCGLYKSKAKN 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I + +Y G++P D+L+ LPG+G K AN+V+++ F I VDTHV R+ NR
Sbjct: 91 LIATCQILVDRYHGEVPREFDQLVELPGVGRKTANVVVSV-LFGTPAIAVDTHVFRVSNR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +PE+ + LQ+ +PK++W + L+ G+ +C +P C C ++
Sbjct: 150 LKLGI-------AKTPEEMEQKLQKAIPKKDWAAAHHWLIYHGRRLCKARKPLCNECFLN 202
Query: 206 EYCPSAFK 213
CPSA K
Sbjct: 203 HLCPSAGK 210
>gi|292671021|ref|ZP_06604447.1| endonuclease III [Selenomonas noxia ATCC 43541]
gi|422343635|ref|ZP_16424562.1| endonuclease III [Selenomonas noxia F0398]
gi|292647338|gb|EFF65310.1| endonuclease III [Selenomonas noxia ATCC 43541]
gi|355378051|gb|EHG25242.1| endonuclease III [Selenomonas noxia F0398]
Length = 210
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + RL +T EAI +A ++ I+ F+ KA +
Sbjct: 32 FELLIAVILSAQCTDVRVNIVTSRLFPRA-NTPEAIASLGQAELEAAIHDCGFFRMKAKH 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ + I L +Y G++P+ + L LPG+G K AN+VM++ F V I VDTHV R+ NR
Sbjct: 91 ILETCDILLQEYGGEVPADFEALQKLPGVGRKTANVVMSVA-FRVPAIAVDTHVFRVANR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +P + + LQ+ +P+ +W + L+ G+ IC +P CG C +S
Sbjct: 150 LHLAV-------GKTPLEVEKGLQKAIPRADWSDAHHWLILHGRQICKARKPLCGDCPLS 202
Query: 206 EYCPSA 211
CPS+
Sbjct: 203 FICPSS 208
>gi|408420792|ref|YP_006762206.1| endonuclease III Nth [Desulfobacula toluolica Tol2]
gi|405108005|emb|CCK81502.1| Nth: endonuclease III [Desulfobacula toluolica Tol2]
Length = 210
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 97/186 (52%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E F +L++ ++S+ D+ + ++L + EA+ A IK +IY FY K
Sbjct: 29 ETAFQLLVATIMSAQCTDRQVNKVSKKLFEK-YPDPEALSHASLDNIKKIIYSTGFYNNK 87
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+K AK L +++G +P + +L+ LPG+G K AN+V++ F Q I VDTHV RI
Sbjct: 88 AKNIKACAKAILERHEGMVPEDISKLVNLPGVGRKTANVVLS-AAFGHQAIVVDTHVLRI 146
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
RLG + + P + L + +PK W ++ L+ FG+ IC +P C C
Sbjct: 147 SKRLGLTDK-------TDPVKVEHELMQIIPKVSWSDLSLQLIYFGREICDAKKPLCQDC 199
Query: 203 TVSEYC 208
+ + C
Sbjct: 200 PLFKIC 205
>gi|354568904|ref|ZP_08988065.1| endonuclease III [Fischerella sp. JSC-11]
gi|353539416|gb|EHC08903.1| endonuclease III [Fischerella sp. JSC-11]
Length = 240
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 92/178 (51%), Gaps = 7/178 (3%)
Query: 58 AEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
A ++ A+ +++L+ FY KA N++ ++ + ++ G++P + +LL LPG+ K
Sbjct: 69 APSLANAELTELENLVRSTGFYRNKAKNIQAACRMIVNEFSGEVPKDMQQLLLLPGVARK 128
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
AN+V+ + G+ VDTHV R+ RLG + P + L R LP+ +W
Sbjct: 129 TANVVLAHAFGINAGVTVDTHVKRLSQRLGLTEH-------TEPIHIEQDLMRLLPQPDW 181
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLRKLER 235
+ L+ G+ +C P C C +++ CPSA E S+K K+ E S +K +R
Sbjct: 182 ENWSIRLIYHGRAVCKARNPACAACELADLCPSANGEFKGESTKQKRKERSQAQKSDR 239
>gi|312135267|ref|YP_004002605.1| endonuclease iii [Caldicellulosiruptor owensensis OL]
gi|311775318|gb|ADQ04805.1| endonuclease III [Caldicellulosiruptor owensensis OL]
Length = 211
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 108/186 (58%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
++ + +L++ +L++ + D+ + L + T E+ +AD + +++ I PV FY K
Sbjct: 28 DKPYELLIATILAAQSTDECVNKITAELFKK-YPTLESFAEADLSELENDIKPVGFYKNK 86
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A ++K+ AKI + KY+G +P++++EL+ L G+G K AN++M + + I VDTH R+
Sbjct: 87 AKSIKETAKILVEKYNGTLPTTIEELVKLKGVGRKTANVIMA-NIYGIPSIIVDTHCMRL 145
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NRLG V +K T + R+ ++ L + + L+V G+ +C ++P+C +C
Sbjct: 146 SNRLGLV---NSKDATKIEFELRDIVEPQL----YTIFSNLMVYHGRAVCKAIKPKCEVC 198
Query: 203 TVSEYC 208
T+ + C
Sbjct: 199 TIKDVC 204
>gi|126437767|ref|YP_001073458.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. JLS]
gi|126237567|gb|ABO00968.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. JLS]
Length = 259
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 99/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L + TA +AD +++LI P FY KA ++ ++
Sbjct: 59 VATILSAQSTDKRVNLTTPALFKK-YRTALDYAQADRTELEELIRPTGFYRNKANSLIRL 117
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG +P+ +D+L+ LPG+G K AN+++ F+V GI VDTH R+ R W
Sbjct: 118 GQELVERFDGQVPADIDDLVTLPGVGRKTANVILG-NAFDVPGITVDTHFGRLVRRWRWT 176
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ P + A+ + + + EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 177 AE-------EDPVKVEHAIGKLIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCP 229
Query: 210 S 210
S
Sbjct: 230 S 230
>gi|373469621|ref|ZP_09560802.1| endonuclease III [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371764113|gb|EHO52537.1| endonuclease III [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 209
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPVA 77
P + FA +LSA + D + + ++ ++++K A+++++ I+ +
Sbjct: 30 PWQLLFATILSA--------QCTDARVNIVTRDLYKKYDSLEKFAAASVEEMEKDIHSIG 81
Query: 78 FYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDT 137
FY KA N+ A+ L+ ++G++PS L+ LL+LPG+G K AN++ F++ I VDT
Sbjct: 82 FYHSKAKNLIACARKLLSDFNGEVPSDLESLLSLPGVGRKTANVIRG-NIFDMPSIVVDT 140
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HV RI +LG ++ P + L LPK+ W+ N L+ G+TIC R
Sbjct: 141 HVKRITKKLGLT-------ESDDPVKIEFELMEILPKDHWILWNTDLITLGRTICIARRE 193
Query: 198 RCGMCTVSEYCPSA 211
+C +C + E CPSA
Sbjct: 194 KCDICFLREDCPSA 207
>gi|392418559|ref|YP_006455164.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Mycobacterium chubuense NBB4]
gi|390618335|gb|AFM19485.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Mycobacterium chubuense NBB4]
Length = 268
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L TA AD A +++LI P F+ K+ ++ K+
Sbjct: 68 VATILSAQSTDKRVNLTTPALFAK-YRTARDYAGADRAELEELIRPTGFFRNKSGSLIKL 126
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ ++DG++P +LDEL+ LPG+G K AN+++ F++ GI VDTH R+ R W
Sbjct: 127 GQELEERFDGEVPRTLDELVTLPGVGRKTANVILG-NAFDIPGITVDTHFGRLVRRWRWT 185
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
++ P + A+ + + EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 186 SE-------EDPVKVEHAVGELIERSEWTLLSHRVIFHGRRVCHSRKPACGVCVLAKDCP 238
Query: 210 S 210
S
Sbjct: 239 S 239
>gi|373498867|ref|ZP_09589365.1| endonuclease III [Fusobacterium sp. 12_1B]
gi|371960146|gb|EHO77812.1| endonuclease III [Fusobacterium sp. 12_1B]
Length = 189
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D V + + + ++T E I+++I F+ KA N
Sbjct: 7 FELLVAVILSAQCTD-VRVNIVTKEMYKKVNTPEGFAALPVEKIEEMIKSTGFFRNKAKN 65
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K ++ L+KY+G+IP +D+L+ L G+G K AN+V W GI VDTHV R+ N
Sbjct: 66 IKLCSQQLLSKYNGEIPKDMDKLIELAGVGRKTANVVRGEVWGLADGITVDTHVKRLTNL 125
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K P + + L + +PK++W+ + L+ G+ C RP+C C +
Sbjct: 126 IGLV-------KNDDPVKIEQELMKIVPKKDWIDFSHYLILQGRDKCIARRPKCSECEIR 178
Query: 206 EYC 208
E+C
Sbjct: 179 EFC 181
>gi|300742227|ref|ZP_07072248.1| endonuclease III [Rothia dentocariosa M567]
gi|300381412|gb|EFJ77974.1| endonuclease III [Rothia dentocariosa M567]
Length = 278
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L Y V E D + F +L++ +LS+ T D + L A A+
Sbjct: 36 RILGETYPYAVAELDFT-----NAFELLIATVLSAQTTDVRVNQVTPALFAR-YPDAPAL 89
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
A E ++ I + FY KA ++ K+A+ YDG++P +LD+L+ L G+G K AN+
Sbjct: 90 AAATEEEVEPYIQSLGFYRAKAKSIVKLARQLTDDYDGEVPGTLDKLVKLAGVGRKTANV 149
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V G+ VDTH R+ R+G T+ P + + + EW +
Sbjct: 150 VLG-NAFGVPGLTVDTHFGRLARRMGLTTE-------DDPVKVEHDVAELIEPREWTDFS 201
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+V G+ IC +P CG+C +++ CPS + E T +K++K
Sbjct: 202 HRMVYHGRRICHARKPACGVCPIADLCPS-WGEGETDEAKARK 243
>gi|307244080|ref|ZP_07526199.1| endonuclease III [Peptostreptococcus stomatis DSM 17678]
gi|306492604|gb|EFM64638.1| endonuclease III [Peptostreptococcus stomatis DSM 17678]
Length = 212
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + + + + + + I+D+I Y KA
Sbjct: 34 FELLVATILSAQCTDVRVNIVTEEMFKK-YNQPQDFKDLSIGQIEDMIKTCGLYKSKAKK 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K+ + I + Y G +P +L++L+ LPG+G K A +V++ F V I VDTHV R+ NR
Sbjct: 93 IKETSSILVDLYGGQVPDNLEDLVKLPGVGRKTAGVVLS-NAFGVPAIAVDTHVFRVSNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G V K ++PE+T AL + +PK+ W + LL+ G+ +C +P C C++S
Sbjct: 152 IGIV-------KETTPEKTEFALMKAIPKDRWTHSHHLLIFHGRRVCKARKPECSNCSIS 204
Query: 206 EYC 208
C
Sbjct: 205 HMC 207
>gi|210623502|ref|ZP_03293847.1| hypothetical protein CLOHIR_01797 [Clostridium hiranonis DSM 13275]
gi|210153560|gb|EEA84566.1| hypothetical protein CLOHIR_01797 [Clostridium hiranonis DSM 13275]
Length = 213
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 97/188 (51%), Gaps = 13/188 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + +KV D + +T + E I ++I Y
Sbjct: 31 PFELLVATILSAQCTDVRVNKVTDEMFKVC-----NTPKQFADLSEEEIGEMIKTCGLYK 85
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA +K ++I Y+ ++P SL+EL+ LPG+G K A +V++ F I VDTHV
Sbjct: 86 SKAKKIKMTSEILYNDYNSEVPDSLEELIKLPGVGRKTAGVVLS-NAFGHPAIPVDTHVF 144
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
RI NR+G V +TS+PE+T L + LPKE W + + L + G+ +C +P C
Sbjct: 145 RIVNRIGIV-------ETSTPEKTEFELMKVLPKERWSKAHHLFIFLGRRMCKARKPECT 197
Query: 201 MCTVSEYC 208
C + ++C
Sbjct: 198 DCPIKKHC 205
>gi|254385576|ref|ZP_05000901.1| endonuclease III [Streptomyces sp. Mg1]
gi|194344446|gb|EDX25412.1| endonuclease III [Streptomyces sp. Mg1]
Length = 284
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L T E +
Sbjct: 43 RELAEVYPYAHPELDFRNP-----FELLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDM 96
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+A ++++I P F+ K+ ++ +++ + G++P +++L++LPG+G K AN+
Sbjct: 97 AQAAPEALEEIIRPTGFFRAKSKSLLGLSQALRDNFGGEVPGRIEDLVSLPGVGRKTANV 156
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ R W Q PE+ + PK EW ++
Sbjct: 157 VLG-NAFGVPGITVDTHFGRLVRRWKWTEQ-------EDPEKVEAEICALFPKSEWTMLS 208
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+V G+ IC +P CG C ++ CP A+ E T K++K
Sbjct: 209 HRVVFHGRRICHARKPACGACPIAPLCP-AYGEGETDPEKARK 250
>gi|358458341|ref|ZP_09168552.1| endonuclease III [Frankia sp. CN3]
gi|357078472|gb|EHI87920.1| endonuclease III [Frankia sp. CN3]
Length = 241
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 106/221 (47%), Gaps = 18/221 (8%)
Query: 4 LEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDK 63
L P + +D T+ P E A +LSA + ++V R TA +
Sbjct: 29 LHPDARIALDFTN----PLELLVATVLSAQCTDKKVNEVTPAVFARY-----PTAASYAG 79
Query: 64 ADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVM 123
AD ++ + P F+ KA ++ + + ++DG++P LDEL+ LPG+G K AN+V+
Sbjct: 80 ADREELEQQLRPTGFFRAKANSLMGLGAALVDRFDGEVPHKLDELVTLPGVGRKTANVVL 139
Query: 124 TLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPL 183
F+ GI VDTHV R+ R G T P + L + ++ W +
Sbjct: 140 GHA-FDTPGITVDTHVGRLSRRFGLTTN-------DDPVKVESDLATLIERKNWTIASDR 191
Query: 184 LVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
++ G+ IC RP CG C V++ CPS F E TS++ + +
Sbjct: 192 MIFHGRRICHARRPACGACGVAKLCPS-FGEGPTSAADAAR 231
>gi|300867997|ref|ZP_07112636.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Oscillatoria sp. PCC 6506]
gi|300334018|emb|CBN57814.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Oscillatoria sp. PCC 6506]
Length = 219
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 8/184 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + L Q TA A+ AD +++L+ FY KA N+K
Sbjct: 37 LLVATILSAQCTDERVNKVTPALFQRFPDTA-AMAIADIEELENLVRSTGFYRNKAKNIK 95
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ + K++G++P ++ LL LPG+ K AN+V+ + G+ VDTHV R+ NRLG
Sbjct: 96 AACHLIVEKFNGEVPKRMELLLELPGVARKTANVVLAHAYGINMGVTVDTHVKRLSNRLG 155
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ P + L + LP+ +W + LV G+ IC P CG+C +++
Sbjct: 156 LTEH-------ADPIRIERDLMKLLPQPDWENWSIRLVYHGRAICNARNPACGVCELADL 208
Query: 208 CPSA 211
CPSA
Sbjct: 209 CPSA 212
>gi|443671241|ref|ZP_21136355.1| putative endonuclease III [Rhodococcus sp. AW25M09]
gi|443416215|emb|CCQ14692.1| putative endonuclease III [Rhodococcus sp. AW25M09]
Length = 245
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 117/235 (49%), Gaps = 17/235 (7%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+TLE + E D + P + ++ +LS+ DK + L TA
Sbjct: 20 RTLETAFPHVYCELDFTTP-----LELAVATILSAQCTDKRVNMVTPALFVR-YRTARDY 73
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
+AD +++ I FY KA ++ + + L K+DG++P++L +L+ LPGIG K AN+
Sbjct: 74 AEADRTELEEFIRTTGFYRNKATSLIGLGQTLLEKFDGEVPATLKDLVTLPGIGRKTANV 133
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F+V GI VDTH R+ R W T+ P + A+ + ++EW ++
Sbjct: 134 VLG-NAFDVPGITVDTHFGRLVRRWQWTTE-------EDPVKVEHAVGALIERKEWTLLS 185
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPS---AFKESSTSSSKSKKSESSSLRKL 233
++ G+ +C +P CG+C +++ CPS + +T+++ K E+ L L
Sbjct: 186 HRVIFHGRRVCHARKPACGVCVLAKDCPSFGAGPTDPTTAAALVKGPETDHLLAL 240
>gi|441216562|ref|ZP_20977082.1| endonuclease III [Mycobacterium smegmatis MKD8]
gi|440624386|gb|ELQ86249.1| endonuclease III [Mycobacterium smegmatis MKD8]
Length = 226
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L + TA +AD +++LI P FY KA ++ K+
Sbjct: 26 VATILSAQSTDKRVNLTTPALFKK-YRTALDYAQADRTELEELIRPTGFYRNKANSLIKL 84
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG++P +LDEL+ LPG+G K AN+++ F++ GI VDTH R+ R W
Sbjct: 85 GQELVERFDGEVPKTLDELVTLPGVGRKTANVILG-NAFDIPGITVDTHFGRLVRRWRWT 143
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
P + A+ + + EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 144 DH-------EDPVKVEFAVAELIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCP 196
Query: 210 S 210
S
Sbjct: 197 S 197
>gi|154150304|ref|YP_001403922.1| endonuclease III [Methanoregula boonei 6A8]
gi|153998856|gb|ABS55279.1| endonuclease III [Methanoregula boonei 6A8]
Length = 220
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 98/183 (53%), Gaps = 8/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F VL+ +LS+ T DK A ++ L + + A+ +A+ A ++ +I+ + +Y KA +
Sbjct: 33 FEVLILTILSAQTTDK-AVLQVKEPLFSAYPSPHALARANPADVEPIIHSLGYYHAKAKH 91
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ A ++ G++P ++DELL++PG+G K AN+V+ G+ GI VDTHV R+ R
Sbjct: 92 IVAAAASVENEFGGEVPRTMDELLSIPGVGRKTANIVLYHGFGQNHGIAVDTHVRRLAQR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G T + + L PK++W + + + G+ C +P CG C +
Sbjct: 152 IGI-------SDTDDVKVIEQDLMALYPKKDWGDLTDVFIAHGRATCDARKPLCGDCVIR 204
Query: 206 EYC 208
+YC
Sbjct: 205 KYC 207
>gi|448688496|ref|ZP_21694298.1| endonuclease III [Haloarcula japonica DSM 6131]
gi|445779162|gb|EMA30099.1| endonuclease III [Haloarcula japonica DSM 6131]
Length = 227
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 73 IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQG 132
IY + F+ K ++ I +I + ++DG++P ++ L LPG+G K AN+V+ G V+G
Sbjct: 82 IYGITFHNNKGGYLQGIGEILIEEHDGEVPDTMSALTDLPGVGRKTANVVLQHGHDVVEG 141
Query: 133 ICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTIC 192
I VDTHV R+ RLG + PE + L +P+ EW + LL+ G+ +C
Sbjct: 142 IVVDTHVQRLSRRLGLT-------EKERPEAIEQDLLDVVPESEWQQFTHLLIDHGRAVC 194
Query: 193 TPLRPRCGMCTVSEYCPSAFKESSTS 218
CG C +S+ CPS +S
Sbjct: 195 GARSADCGACVLSDICPSEKGDSEVD 220
>gi|410463117|ref|ZP_11316653.1| endonuclease III [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409983751|gb|EKO40104.1| endonuclease III [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 211
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 60 AIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMA 119
A+ KA ++ +++ F+ +KA N+ AK+ + ++ G IP+S+DEL ALPG+ K A
Sbjct: 65 ALAKAAVGEVETVVHSTGFFRQKAKNLVAAAKLLVERHGGRIPASMDELTALPGVARKTA 124
Query: 120 NMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVR 179
N+V++ GI VDTHV R+ RLG T + +P + L E +
Sbjct: 125 NIVLSNALGVNVGIAVDTHVRRLSFRLGLTT-------SENPVIIEKDLMPLFAPEAYGE 177
Query: 180 INPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
IN LLV FG+ +C RPRCG C +++ CP
Sbjct: 178 INHLLVLFGREVCKARRPRCGDCVLNDVCP 207
>gi|373461989|ref|ZP_09553722.1| endonuclease III [Prevotella maculosa OT 289]
gi|371950166|gb|EHO68024.1| endonuclease III [Prevotella maculosa OT 289]
Length = 236
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 110/197 (55%), Gaps = 7/197 (3%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F ++++ LLS+ DK + L ++ TAEA+ KAD I LI V++ KA +
Sbjct: 39 FQLIVATLLSAQCTDKRINMITPELFRH-YPTAEAMAKADWEEIFQLIKSVSYPNAKAHH 97
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AK+ + +++G++P + D+L LPG+G K AN+V + WF + VDTHV R+ +R
Sbjct: 98 LSEMAKMLVAQFNGEVPDNTDDLTRLPGVGRKTANVVQAV-WFGKPTLAVDTHVFRVSHR 156
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG V + ++P + L +++P+ + + L+ G+ +C +P+C C +
Sbjct: 157 LGLVPETA-----NTPLKVELELMKYIPEVDVSDAHHWLLLHGRYVCKSQKPQCESCPFN 211
Query: 206 EYCPSAFKESSTSSSKS 222
+CP+ K ++KS
Sbjct: 212 AFCPAGLKILKERAAKS 228
>gi|206601604|gb|EDZ38087.1| Endonuclease III/Nth [Leptospirillum sp. Group II '5-way CG']
Length = 241
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 104/186 (55%), Gaps = 9/186 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ + D++ + L A ++ AD T++ LI F+ RK+ +
Sbjct: 55 FELLVATVLSAQSTDRMVNSVTPALFAR-FPDATSLQHADPETVEGLIRSTGFFHRKSLH 113
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++AK + +Y G++P +++LL LPG+G K A++++ G F++ I VDTHV R+ R
Sbjct: 114 IVRLAKELVRRYRGEVPPRMEDLLTLPGVGRKTASVILAHG-FHLPAIPVDTHVTRVSLR 172
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + P E L+R + +++W+ + L+ G+ +C +P C C +S
Sbjct: 173 LGLTV-------SRDPGVIEEDLKRLMDEKDWIAGSSRLLLHGRYVCLARKPLCSNCVLS 225
Query: 206 EYCPSA 211
+ CPS+
Sbjct: 226 DICPSS 231
>gi|87311493|ref|ZP_01093612.1| DNA-(apurinic or apyrimidinic site) lyase [Blastopirellula marina
DSM 3645]
gi|87285749|gb|EAQ77664.1| DNA-(apurinic or apyrimidinic site) lyase [Blastopirellula marina
DSM 3645]
Length = 219
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 97/187 (51%), Gaps = 8/187 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E + +L++ +LS+ D + + L TAE I A I+ L+ F+ K
Sbjct: 35 ETPYQLLIATILSAQCTDIRVNIVTKELFAK-YPTAEEIAALPIAKIEKLVQSTGFFRNK 93
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+K ++ + YDG +P+ LD L+ALPG+G K AN+V+ + G+ VDTHV R+
Sbjct: 94 AKNIKAASQELVDAYDGQVPADLDALVALPGVGRKTANVVLGTAFGIPTGVVVDTHVGRL 153
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
R+G Q + S L + LP++EW++ + ++ G+ IC +P+C C
Sbjct: 154 SRRMGLTAQVDAVKVESE-------LIQLLPQKEWIQFSHRMIHHGRAICDARKPKCDQC 206
Query: 203 TVSEYCP 209
++CP
Sbjct: 207 HFMKFCP 213
>gi|441507823|ref|ZP_20989748.1| endonuclease III [Gordonia aichiensis NBRC 108223]
gi|441447750|dbj|GAC47709.1| endonuclease III [Gordonia aichiensis NBRC 108223]
Length = 258
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + + V + TA AD ++++I FY
Sbjct: 51 PLELSVATILSAQCTDVRVNMVTPALFAKY-----RTAADYAGADRTELEEMIRTTGFYR 105
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + + ++DG++P +L EL++LPG G K AN+V+ F++ GI VDTH
Sbjct: 106 NKANSIIGLGQALVERFDGEVPHTLKELVSLPGFGRKTANVVLG-NAFDIPGITVDTHFS 164
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW T+ + P + A+ ++EW ++ ++ G+ +C +P CG
Sbjct: 165 RLVQRWGWTTE-------TDPVKIEHAVGELFERKEWTNLSHRVIFHGRRVCHARKPACG 217
Query: 201 MCTVSEYCPS 210
+C +++ CPS
Sbjct: 218 VCVLAKDCPS 227
>gi|335030052|ref|ZP_08523551.1| endonuclease III [Streptococcus infantis SK1076]
gi|334267514|gb|EGL85974.1| endonuclease III [Streptococcus infantis SK1076]
Length = 209
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 99/192 (51%), Gaps = 14/192 (7%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
F +L++ +LS+ T D + A L T +A+ A E+ I I + Y KA
Sbjct: 31 HFELLVAVMLSAQTTDAAVNKATPGLFA-AFPTPQAMADASESNIAKHISRLGLYRNKAK 89
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+KK A+ L +DG +P + +EL +L G+G K AN+VM++G F + VDTHV RIC
Sbjct: 90 FLKKCAQQLLEDFDGQVPQTREELESLAGVGRKTANVVMSVG-FGIPAFAVDTHVERICK 148
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
V +K+++P + + + LP EEW+ + ++ FG+ IC P P C
Sbjct: 149 HHDIV------KKSATPLEVEKRVMDVLPPEEWLAAHQAMIYFGRAICHPKNPEC----- 197
Query: 205 SEYCPSAFKESS 216
E+ P + SS
Sbjct: 198 -EHYPQLYDFSS 208
>gi|296133862|ref|YP_003641109.1| endonuclease III [Thermincola potens JR]
gi|296032440|gb|ADG83208.1| endonuclease III [Thermincola potens JR]
Length = 208
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 9/185 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + L T E + KA +++LI Y KA N
Sbjct: 30 FELLVATVLSAQCTDERVNKVTPALFAK-FGTPEKMSKAPVKEVEELIKSCGLYHNKARN 88
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +K + ++ G +P +L EL++LPG+G K AN+V++ F I VDTHV R+ NR
Sbjct: 89 LVAASKKLVAEFKGQVPDTLQELISLPGVGRKTANVVLS-NAFARDAIAVDTHVFRVANR 147
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG +S+P +T L R +P+++W R + L+ G+ +C P+C C ++
Sbjct: 148 LGLA-------DSSTPLKTEADLMRAIPRDKWSRAHHWLIHHGRKVCKARNPQCVNCCLA 200
Query: 206 EYCPS 210
YC S
Sbjct: 201 VYCKS 205
>gi|342216539|ref|ZP_08709186.1| endonuclease III [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587429|gb|EGS30829.1| endonuclease III [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 218
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 96/183 (52%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + + + + + +D + ++ LI FY KA N
Sbjct: 34 FEMLVATILSAQCTDVRVNMVTKEVYKKYKTPQDFVDLGVQG-LEPLIRSCGFYKNKAKN 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ AKI + Y +P +++EL+ LPG+G K AN+V + F V I VDTHV R NR
Sbjct: 93 IVATAKILVEDYQSQVPETIEELVKLPGVGQKTANVVAS-TCFGVDAIAVDTHVFRTSNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G K + E+T LQ+ +PK+ W + + LL+ G+ IC P+C +C ++
Sbjct: 152 IGLA-------KAKTVEETEVQLQKAIPKDRWTKTHHLLIFLGRRICASRSPKCEICPLT 204
Query: 206 EYC 208
E C
Sbjct: 205 EVC 207
>gi|183985132|ref|YP_001853423.1| endonuclease III Nth [Mycobacterium marinum M]
gi|183178458|gb|ACC43568.1| endonuclease III Nth [Mycobacterium marinum M]
Length = 260
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 99/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L TA +AD A +++LI P FY KA ++ +
Sbjct: 60 VATILSAQSTDKRVNLTTPDLFVK-YQTALDYAQADRAELENLIRPTGFYRNKANSLIGL 118
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG +P++++EL+ LPG+G K AN+++ F+V GI VDTH R+ R W
Sbjct: 119 GQALVERFDGQVPATMEELVTLPGVGRKTANVILG-NAFDVPGITVDTHFGRLARRWRWT 177
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ P + A+ + ++EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 178 AE-------EDPVKVEHAVGELIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCP 230
Query: 210 S 210
S
Sbjct: 231 S 231
>gi|453054497|gb|EMF01949.1| endonuclease III [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 402
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L + T E +
Sbjct: 164 RELAEVYPYAHPELDFENP-----FQLLVATVLSAQTTDLRVNQTTPALFE-AYPTPEDM 217
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD ++ LI P F+ KA ++ ++ + G++P L +L+ LPG+G K AN+
Sbjct: 218 AAADPERLEQLIRPTGFFRAKARSLLGLSAALRDDFGGEVPGRLQDLVRLPGVGRKTANV 277
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F V GI VDTH R+ R W + + PE+ + PK +W ++
Sbjct: 278 VLG-NAFGVPGITVDTHFQRLVRRWRWTAE-------TDPEKIEAEVCALFPKSDWTMLS 329
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
++ G+ IC +P CG C ++ CP A+ E T K++K
Sbjct: 330 HRVIFHGRRICHSRKPACGACPIAPLCP-AYGEGETDPEKARK 371
>gi|329939397|ref|ZP_08288733.1| endonuclease/N-glycosylase [Streptomyces griseoaurantiacus M045]
gi|329301626|gb|EGG45520.1| endonuclease/N-glycosylase [Streptomyces griseoaurantiacus M045]
Length = 288
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L E +
Sbjct: 46 RELAEVYPYAHPELDFENP-----FQLLVATVLSAQTTDLRVNQTTPALFAR-YPAPEDL 99
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD +++++ P F+ K ++ ++K + ++DG++P L++L+ LPG+G K A +
Sbjct: 100 AAADPEEVEEILRPCGFFRAKTRSVMGLSKALVERFDGEVPGRLEDLVTLPGVGRKTAFV 159
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F GI VDTH R+ R W + + PE+ A+ PK +W ++
Sbjct: 160 VLG-NAFGRPGITVDTHFQRLVRRWRWTEE-------TEPEKIEAAVGALFPKSDWTMLS 211
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
++ G+ +C +P CG C ++ CP A+ E T K+KK
Sbjct: 212 HHVIFHGRRMCHARKPACGACPIAPLCP-AYGEGETDPEKAKK 253
>gi|386857869|ref|YP_006262046.1| putative endonuclease III [Deinococcus gobiensis I-0]
gi|380001398|gb|AFD26588.1| putative endonuclease III [Deinococcus gobiensis I-0]
Length = 229
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 14/209 (6%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+ LE +Y E D P F +L++ +LS+ D + A L A A
Sbjct: 22 LGALETLYPDARTELDYRSP-----FELLVATVLSAQATDVSVNAATPALFAR-YPDAHA 75
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ A I+ I + Y KA N+ +A++ + ++ G++P ++ALPG G K AN
Sbjct: 76 LSTASPEDIEPYIRRIGLYRGKARNLAALARLLVERHGGEVPDDFAAVVALPGAGRKTAN 135
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V++ + I VDTHV R+ RLG TQ + P++ L+R P+ WV +
Sbjct: 136 VVLS-NAYGYPAIAVDTHVGRLARRLGLSTQ-------THPDKVEADLERLFPRGRWVFL 187
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ L+ G+ +C RP CG C + +CP
Sbjct: 188 HHALILHGRRVCAARRPLCGECVMRPFCP 216
>gi|238061480|ref|ZP_04606189.1| endonuclease III [Micromonospora sp. ATCC 39149]
gi|237883291|gb|EEP72119.1| endonuclease III [Micromonospora sp. ATCC 39149]
Length = 262
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ DK + +L TA AD A +++LI P FY K ++ ++
Sbjct: 47 VATILSAQCTDKKVNEVTPKLFGR-YPTAADYAGADRAEMEELIRPTGFYRNKTTSLIRL 105
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + +YDG +P LD L+ LPG+G K AN+++ F V GI VDTH R+ +R
Sbjct: 106 GQALVERYDGQVPGKLDALVTLPGMGRKTANVILG-NAFGVPGITVDTHFQRLVHRWRLT 164
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ + P + A+ PK +W ++ ++ G+ +C +P CG CT+++ CP
Sbjct: 165 AE-------TDPVKIEHAIGAMYPKRDWTMLSHRIIFHGRRVCHAKKPGCGACTLAKLCP 217
Query: 210 SAFKESSTSSSKSKKSESSSLRKL 233
S + ++ +K + R L
Sbjct: 218 SYGTGPTEPAAAAKLLKGPRARDL 241
>gi|313888481|ref|ZP_07822148.1| endonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845510|gb|EFR32904.1| endonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 213
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 100/183 (54%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D + + + + + E D T++ L+ Y KA N
Sbjct: 34 FELLVATILSAQCTDVRVNKVTEEMFKK-YNKPEDFANMDIKTLEGLVKECGLYRNKAKN 92
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+K + + L +++G +P ++ +L+ LPG+G K AN+V + F V I VDTHV R+ NR
Sbjct: 93 IKASSNVILEEFNGKVPETIKDLMKLPGVGKKTANVVAST-CFGVPAIAVDTHVFRVSNR 151
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
+G+V++ ++ E+T +AL+ + ++ W + + L + G+ CT P+C C +
Sbjct: 152 IGFVSE-------NNVEKTEKALENKIDRKRWTKAHHLFIFHGRRCCTARSPKCQACPIK 204
Query: 206 EYC 208
++C
Sbjct: 205 DFC 207
>gi|242398202|ref|YP_002993626.1| Endonuclease III [Thermococcus sibiricus MM 739]
gi|242264595|gb|ACS89277.1| Endonuclease III [Thermococcus sibiricus MM 739]
Length = 233
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 10/186 (5%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYP--VAFYTRKA 83
+ L+ ++S +D+V + + ++L E I A +++ + V + K
Sbjct: 44 YKTLIYCIISQRMRDEVTN-KVGKMLFKKYKNIENIANAPVEEMQEFLRNNGVGLWKTKG 102
Query: 84 CNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRIC 143
+ + ++I L +Y G +P+ ++EL+ LPGIG K AN+V+ G F Q I VDTHV+RI
Sbjct: 103 EWIVRTSQIILREYRGRVPNKIEELMKLPGIGRKCANIVLAYG-FGKQTIPVDTHVNRIS 161
Query: 144 NRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCT 203
RLG + P T +PE+ E L++ +P++ W+ IN +V G+ IC P+ P+C C
Sbjct: 162 KRLG-LAPP-----TVAPEKVEEYLKKLIPEDLWIYINHAMVDHGKRICKPIGPKCHECF 215
Query: 204 VSEYCP 209
+ CP
Sbjct: 216 FQDLCP 221
>gi|125973798|ref|YP_001037708.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Clostridium thermocellum ATCC 27405]
gi|256004530|ref|ZP_05429509.1| endonuclease III [Clostridium thermocellum DSM 2360]
gi|385778329|ref|YP_005687494.1| endonuclease III [Clostridium thermocellum DSM 1313]
gi|419722223|ref|ZP_14249371.1| endonuclease III [Clostridium thermocellum AD2]
gi|419724321|ref|ZP_14251389.1| endonuclease III [Clostridium thermocellum YS]
gi|125714023|gb|ABN52515.1| endonuclease III [Clostridium thermocellum ATCC 27405]
gi|255991535|gb|EEU01638.1| endonuclease III [Clostridium thermocellum DSM 2360]
gi|316940009|gb|ADU74043.1| endonuclease III [Clostridium thermocellum DSM 1313]
gi|380772327|gb|EIC06179.1| endonuclease III [Clostridium thermocellum YS]
gi|380781794|gb|EIC11444.1| endonuclease III [Clostridium thermocellum AD2]
Length = 213
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E +L+S L++ D + + L + A AD ++ I P FY K
Sbjct: 29 ENPLQLLISTQLAAQCTDARVNVVTKTLFKK-YKDARDFANADLKELEQDIKPTGFYHNK 87
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+K+ KI + K+ G +P ++++LL LPG+G K AN+++ F + GI VDTH R+
Sbjct: 88 AKNIKETCKIIVEKFGGKVPDNMEDLLTLPGVGRKTANVILG-DAFGIPGIVVDTHAKRL 146
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NR+G V T P++ L +PKE+W LV G+ +C +P C C
Sbjct: 147 SNRIGLVN-------TDDPKKIEFELMEIVPKEKWSLFCHQLVYHGRAVCKARKPECDKC 199
Query: 203 TVSEYC 208
+ +YC
Sbjct: 200 AIIDYC 205
>gi|448328069|ref|ZP_21517385.1| endonuclease III [Natrinema versiforme JCM 10478]
gi|445616664|gb|ELY70284.1| endonuclease III [Natrinema versiforme JCM 10478]
Length = 227
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + + L + AE D+ + + + + +Y KA
Sbjct: 35 RLELLIAVILSAQCTDERVNKETKHLFEK-YDGAEDYATVDQDELAEDLNSITYYNSKAE 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
++ L +DG++P ++DEL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIRDSCATILEDHDGEVPDTMDELTELSGVGRKTANVVLQHGHDIVEGIVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + PE+ + L +P+++W + L + G+ CT P C C +
Sbjct: 154 RLGLTEE-------EYPERIEQDLIEIVPEDDWQQFTHLCIDHGRATCTAQNPDCADCVL 206
Query: 205 SEYCPSAFKES 215
++ CPS +S
Sbjct: 207 ADICPSEKGDS 217
>gi|345849058|ref|ZP_08802074.1| endonuclease/N-glycosylase [Streptomyces zinciresistens K42]
gi|345639477|gb|EGX60968.1| endonuclease/N-glycosylase [Streptomyces zinciresistens K42]
Length = 313
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 106/223 (47%), Gaps = 15/223 (6%)
Query: 2 KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAI 61
+ L VY E D P F +L++ +LS+ T D + L T E +
Sbjct: 72 RELAGVYPYAHPELDFDNP-----FQLLVATVLSAQTTDLRVNQTTPALFA-AYPTPEDL 125
Query: 62 DKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANM 121
AD +++++ P F+ K ++ ++K +Y G++P L++L+ LPG+G K A +
Sbjct: 126 AAADPEAVEEILRPTGFFRAKTKSVMGLSKALAEEYGGEVPGRLEDLVKLPGVGRKTAFV 185
Query: 122 VMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRIN 181
V+ F GI VDTH R+ R W Q + P++ + PK +W ++
Sbjct: 186 VLG-NAFGRPGITVDTHFQRLVRRWKWTEQ-------TDPDKIEAEIAGLFPKSDWTDLS 237
Query: 182 PLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+V G+ IC +P CG C ++ CP AF E T K++K
Sbjct: 238 HHVVWHGRRICHARKPACGACPIAPLCP-AFGEGETDPEKARK 279
>gi|301058277|ref|ZP_07199317.1| endonuclease III [delta proteobacterium NaphS2]
gi|300447611|gb|EFK11336.1| endonuclease III [delta proteobacterium NaphS2]
Length = 213
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 20/213 (9%)
Query: 1 MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
K L+P+Y+ P F +L+S +LS+ DK + + L Q A+
Sbjct: 15 FKILDPLYTREKTALKYKTP-----FQLLISTILSAQCTDKQVNSVTKTLFQKYRSPADF 69
Query: 61 IDKADEATIKDL---IYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPK 117
+ A I +L I P F+ K ++K + + K+ G++P++++EL+ LPG+G K
Sbjct: 70 LS----APISELEMDIRPTGFFRNKTKSIKGCCQGLVEKFGGEVPATMEELIKLPGVGRK 125
Query: 118 MANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEW 177
AN V+ F+V G+ VDTHV R+ RL + + P++ LQ+ LPKE W
Sbjct: 126 TANCVLG-AAFDVPGVVVDTHVKRLAVRLSLT-------ENNHPDKIEMDLQKLLPKERW 177
Query: 178 VRINPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
R + +L+ G+ +C +P C V CPS
Sbjct: 178 RRFSDILIYHGRAVCNARKPDHTACAVFSLCPS 210
>gi|281417954|ref|ZP_06248974.1| endonuclease III [Clostridium thermocellum JW20]
gi|281409356|gb|EFB39614.1| endonuclease III [Clostridium thermocellum JW20]
Length = 213
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 9/186 (4%)
Query: 23 ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRK 82
E +L+S L++ D + + L + A AD ++ I P FY K
Sbjct: 29 ENPLQLLISTQLAAQCTDARVNVVTKTLFKK-YKDARDFANADLKELEQDIKPTGFYHNK 87
Query: 83 ACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRI 142
A N+K+ KI + K+ G +P ++++LL LPG+G K AN+++ F + GI VDTH R+
Sbjct: 88 AKNIKETCKIIVEKFGGKVPDNMEDLLTLPGVGRKTANVILG-DAFGIPGIVVDTHAKRL 146
Query: 143 CNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMC 202
NR+G V T P++ L +PKE+W LV G+ +C +P C C
Sbjct: 147 SNRIGLVN-------TGDPKKIEFELMEIVPKEKWSLFCHQLVYHGRAVCKARKPECDKC 199
Query: 203 TVSEYC 208
+ +YC
Sbjct: 200 AIIDYC 205
>gi|392964197|ref|ZP_10329618.1| DNA-(apurinic or apyrimidinic site) lyase [Fibrisoma limi BUZ 3]
gi|387847092|emb|CCH51662.1| DNA-(apurinic or apyrimidinic site) lyase [Fibrisoma limi BUZ 3]
Length = 220
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 97/183 (53%), Gaps = 9/183 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F L+S ++S T D+ +RL T + + D T+ +L+Y + +KA
Sbjct: 38 FEQLISCIVSIRTLDETTIPVSERLFAVA-RTPDELLALDIPTLTELLYGTTYPDQKAYT 96
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
M+ IA+ + ++ G +P+ + L + G+GPK AN+ + + I VD HVHR+ NR
Sbjct: 97 MRGIAERTVLEFGGTLPADFELLTSFKGVGPKCANLALGVA-AGQAAISVDVHVHRVVNR 155
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
G+V T PEQT + L+ +P+ +W+ IN LL+ FG+ ICT P C C V
Sbjct: 156 WGYVL-------TRQPEQTLKVLETKVPQGQWIDINRLLMPFGKHICTGTLPHCSTCPVL 208
Query: 206 EYC 208
++C
Sbjct: 209 QWC 211
>gi|453077888|ref|ZP_21980624.1| endonuclease III [Rhodococcus triatomae BKS 15-14]
gi|452757973|gb|EME16371.1| endonuclease III [Rhodococcus triatomae BKS 15-14]
Length = 226
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 108/216 (50%), Gaps = 16/216 (7%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + ++V R TAE AD +++ I FY
Sbjct: 21 PLELSVATILSAQCTDVRVNQVTPALFARY-----RTAEDYAGADRTELEEYIRTTGFYR 75
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + + ++DG++P +L EL++LPG G K AN+V+ F+V GI VDTH
Sbjct: 76 NKATSIIGLGQALVERFDGEVPGTLRELVSLPGFGRKTANVVLG-NAFDVPGITVDTHFG 134
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R W + P + A+ +PK++W ++ ++ G+ +C +P CG
Sbjct: 135 RLVRRWQWTAE-------EDPVKVEHAVGELIPKKDWTILSHRVIFHGRRVCHAKKPACG 187
Query: 201 MCTVSEYCPS---AFKESSTSSSKSKKSESSSLRKL 233
+C +++ CPS E + +++ K E+ L L
Sbjct: 188 VCLLAKDCPSYGIGPTEPTVAAALVKGPETEHLLDL 223
>gi|218247153|ref|YP_002372524.1| endonuclease III [Cyanothece sp. PCC 8801]
gi|257060225|ref|YP_003138113.1| endonuclease III [Cyanothece sp. PCC 8802]
gi|218167631|gb|ACK66368.1| endonuclease III [Cyanothece sp. PCC 8801]
gi|256590391|gb|ACV01278.1| endonuclease III [Cyanothece sp. PCC 8802]
Length = 220
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 100/186 (53%), Gaps = 8/186 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D+ + +L A ++ KAD ++++I FY KA N++
Sbjct: 40 LLVATILSAQCTDERVNKVTPKLFSR-FPDALSLAKADREELEEIIRSTGFYRNKAKNIQ 98
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
+ + +++G +P +++LL+LPG+ K AN+V+ G+ QG+ VDTHV R+ RLG
Sbjct: 99 GACQKIVKEFEGQVPKQMEQLLSLPGVARKTANVVLAHGFGINQGVTVDTHVKRLSGRLG 158
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
K + P + L + LP+ +W + ++ G+ +C+ +P C C+++
Sbjct: 159 LT-------KETDPVKIERDLMKLLPQPDWENFSIRIIYHGRAVCSARKPDCANCSLAHL 211
Query: 208 CPSAFK 213
CPS +
Sbjct: 212 CPSVLE 217
>gi|118619415|ref|YP_907747.1| endonuclease III Nth [Mycobacterium ulcerans Agy99]
gi|118571525|gb|ABL06276.1| endonuclease III Nth [Mycobacterium ulcerans Agy99]
Length = 233
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 99/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L TA +AD A +++LI P FY KA ++ +
Sbjct: 33 VATILSAQSTDKRVNLTTPDLFAK-YQTALDYAQADRAELENLIRPTGFYRNKANSLIGL 91
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG +P++++EL+ LPG+G K AN+++ F+V GI VDTH R+ R W
Sbjct: 92 GQALVERFDGQVPATMEELVTLPGVGRKTANVILG-NAFDVPGITVDTHFGRLARRWRWT 150
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ P + A+ + ++EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 151 AE-------EDPVKVEHAVGELIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCP 203
Query: 210 S 210
S
Sbjct: 204 S 204
>gi|354614897|ref|ZP_09032723.1| endonuclease III [Saccharomonospora paurometabolica YIM 90007]
gi|353220749|gb|EHB85161.1| endonuclease III [Saccharomonospora paurometabolica YIM 90007]
Length = 227
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ T D+ + L TA AD + +LI P FY K+ ++
Sbjct: 24 LLVAVILSAQTTDERVNQVTPALFAR-YPTAADYAGADRVELAELIRPTGFYRNKSSSLM 82
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
K+ L ++DG +P SLD L+ LPG+G K AN+V+ F V GI VDTH R+ R
Sbjct: 83 KLGAALLERHDGAVPGSLDALVKLPGVGRKTANVVLGEA-FAVPGITVDTHFGRLVRRWR 141
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
W P + + P++EW ++ ++ G+ +C RP CG C ++
Sbjct: 142 WTV-------ADDPVKVEHEVGDLFPRKEWTMLSHRVIFHGRRVCHSRRPACGACPLARD 194
Query: 208 CPS 210
CPS
Sbjct: 195 CPS 197
>gi|448344745|ref|ZP_21533647.1| endonuclease III [Natrinema altunense JCM 12890]
gi|445636851|gb|ELY90008.1| endonuclease III [Natrinema altunense JCM 12890]
Length = 227
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 96/191 (50%), Gaps = 8/191 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + + L + AE A++ + + + +Y KA
Sbjct: 35 RLELLIAVILSAQCTDERVNQETEHLFEK-YDGAEDYATAEQDELAADLNSITYYNNKAK 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
++ + L +DG++P ++ EL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIRSACESILEDHDGEVPDTMAELTDLSGVGRKTANVVLQHGHDIVEGIVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG + P++ E L +P++ W L + G+ CT P CG C +
Sbjct: 154 RLGLTEE-------EYPDRIEEDLMEIVPEDSWQEFTHLCIDHGRATCTAQNPDCGDCVL 206
Query: 205 SEYCPSAFKES 215
++ CPSA +S
Sbjct: 207 ADRCPSAKGDS 217
>gi|402573123|ref|YP_006622466.1| endonuclease III [Desulfosporosinus meridiei DSM 13257]
gi|402254320|gb|AFQ44595.1| endonuclease III, DNA-(apurinic or apyrimidinic site) lyase
[Desulfosporosinus meridiei DSM 13257]
Length = 225
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + L +T +A+ + A +++ I + Y KA N
Sbjct: 35 FELLIATILSAQCTDERVNLVTASLFAEA-NTPQAVLELGLAKLENKIRSLGLYHNKAKN 93
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ + + G +P LD L LPG+G K AN+V++ F + I VDTHV R+ +R
Sbjct: 94 ILAACQVLVENFQGQVPGDLDLLKRLPGVGRKTANVVVS-NAFGIPSIAVDTHVFRVAHR 152
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG T +PE+ + L P+++W ++ LL+ G+ IC +P C +C VS
Sbjct: 153 LGLST-------GKTPEKVEDELMELFPRDKWSLLHHLLIFHGRRICNARKPGCEVCPVS 205
Query: 206 EYCPSAFKESSTSSSKSKK 224
EYC +E + K ++
Sbjct: 206 EYCKMHREEEGLVTQKIRE 224
>gi|225174628|ref|ZP_03728626.1| endonuclease III [Dethiobacter alkaliphilus AHT 1]
gi|225169755|gb|EEG78551.1| endonuclease III [Dethiobacter alkaliphilus AHT 1]
Length = 222
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 19/220 (8%)
Query: 5 EPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKA 64
EPV L D + +L++ +LS+ + DK + L + +
Sbjct: 21 EPVSELNFDTP----------WQLLVAVILSAQSTDKQVNKVTANLFAKYASPQDMAELT 70
Query: 65 DEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMT 124
E +D I + + KA ++ A+ L ++ G++P +L +L +LPG+G K AN+V+
Sbjct: 71 PEELAED-IKSLGLFRNKAKHLVGAARAILDQHGGEVPRTLAKLQSLPGVGRKTANVVLA 129
Query: 125 LGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLL 184
F V + VDTHV R+ NRLG K +PE+T + L R +P+ W + L
Sbjct: 130 NA-FGVPALAVDTHVFRVANRLGLA-------KAKTPEETEKQLSRAIPRSLWADAHHWL 181
Query: 185 VGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKK 224
+ G+ IC +PRC C V+E+C KE TS + K
Sbjct: 182 ILHGRYICVARKPRCPQCPVTEWCSWYQKEQKTSPKRGAK 221
>gi|452207737|ref|YP_007487859.1| endonuclease III [Natronomonas moolapensis 8.8.11]
gi|452083837|emb|CCQ37164.1| endonuclease III [Natronomonas moolapensis 8.8.11]
Length = 227
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L+S +LS+ D+ + L + A +ADE+ + I + +Y KA
Sbjct: 35 RLELLISVILSAQCTDERVNSVTADLF-DAYDGPAAYAEADESELAAAIDSITYYNNKAS 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+ + + +DG++P ++ EL L G+G K AN+V+ G V+GI VDTHV RI
Sbjct: 94 YITSACRDIVEIHDGEVPDTMSELTDLAGVGRKTANVVLQHGHEVVEGIVVDTHVQRISR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG T++ T PE+ L +P+ +W LL+ G+ CT P C C +
Sbjct: 154 RLGL-----TEEHT--PERIESDLMGVVPEGDWKEFTHLLISHGRDTCTARNPDCSNCVL 206
Query: 205 SEYCPSA 211
+ CPS+
Sbjct: 207 EDICPSS 213
>gi|108801779|ref|YP_641976.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. MCS]
gi|119870930|ref|YP_940882.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. KMS]
gi|108772198|gb|ABG10920.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. MCS]
gi|119697019|gb|ABL94092.1| DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
[Mycobacterium sp. KMS]
Length = 259
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 98/181 (54%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L + TA +AD +++LI P FY KA ++ ++
Sbjct: 59 VATILSAQSTDKRVNLTTPALFKK-YRTALDYAQADRTELEELIRPTGFYRNKANSLIRL 117
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG +P+ +D+L+ LPG+G K AN+++ F V GI VDTH R+ R W
Sbjct: 118 GQELVERFDGQVPADIDDLVTLPGVGRKTANVILG-NAFEVPGITVDTHFGRLVRRWRWT 176
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ P + A+ + + + EW ++ ++ G+ +C +P CG+C +++ CP
Sbjct: 177 AE-------EDPVKVEHAIGKLIERSEWTLLSHRVIFHGRRVCHARKPACGVCVLAKDCP 229
Query: 210 S 210
S
Sbjct: 230 S 230
>gi|448321572|ref|ZP_21511048.1| endonuclease III [Natronococcus amylolyticus DSM 10524]
gi|445603124|gb|ELY57092.1| endonuclease III [Natronococcus amylolyticus DSM 10524]
Length = 227
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 105/210 (50%), Gaps = 9/210 (4%)
Query: 2 KTLEPVYSLGVDETDSSLPPK-ERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEA 60
+ +E V L + DS++ + R +L++ +LS+ D+ + + L + +
Sbjct: 11 QAVEVVDRLEAEYPDSTISLRYSNRLELLIAVILSAQCTDERVNAETEHLFEKYDGAEDY 70
Query: 61 IDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMAN 120
+ ++E +DL + +Y KA +K + L ++DG++P ++DEL L G+G K AN
Sbjct: 71 VAVSEEELAEDL-NSITYYNSKAGYIKSSCETILEEHDGEVPDTMDELTELSGVGRKTAN 129
Query: 121 MVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRI 180
+V+ G V+GI VDTHV R+ RLG + PE + L +P+ W +
Sbjct: 130 VVLQHGHDVVEGIVVDTHVQRLSRRLGLTEE-------ERPEAIEQELMALVPEGYWQQF 182
Query: 181 NPLLVGFGQTICTPLRPRCGMCTVSEYCPS 210
L + G+ CT P C C +++ CPS
Sbjct: 183 THLCIDHGRATCTARSPDCDDCVLADVCPS 212
>gi|261338652|ref|ZP_05966536.1| endonuclease III [Bifidobacterium gallicum DSM 20093]
gi|270276374|gb|EFA22228.1| endonuclease III [Bifidobacterium gallicum DSM 20093]
Length = 220
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 101/187 (54%), Gaps = 4/187 (2%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK + L + TA + A+ ++D+I+P+ F+ K +
Sbjct: 37 FELLIATVLSAQCTDKRVNETTPVLFE-AYPTAHELAAANPQDVEDIIHPLGFFRAKTKH 95
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +++ + ++DG++P ++++L+ LPG+G K AN+V+ F+V G VDTHV R+ R
Sbjct: 96 IIALSQAIVHEFDGEVPGTMEQLVTLPGVGRKTANVVLG-NAFHVPGFPVDTHVIRVTAR 154
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L W + + PE + + P EW ++ L+ G+ +C RP C C ++
Sbjct: 155 LHW--RASWNDPKAKPELIEQEITACFPPSEWTDLSHRLILHGRNVCKARRPLCEQCPLN 212
Query: 206 EYCPSAF 212
CPS+
Sbjct: 213 LTCPSSL 219
>gi|238019075|ref|ZP_04599501.1| hypothetical protein VEIDISOL_00937 [Veillonella dispar ATCC 17748]
gi|237864330|gb|EEP65620.1| hypothetical protein VEIDISOL_00937 [Veillonella dispar ATCC 17748]
Length = 211
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 99/188 (52%), Gaps = 9/188 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ D+ + +RL H A+ ++ ++ LI Y KA N
Sbjct: 32 FELLVAVVLSAQCTDERVNIVTKRLFPELNHPAKMLE-IGVTKLETLIKDCGLYKSKAKN 90
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ +I + +Y G++P D+L+ LPG+G K AN+V+++ F I VDTHV R+ NR
Sbjct: 91 LIATCQILVEQYHGEVPREFDQLVELPGVGRKTANVVVSV-LFGTPAIAVDTHVFRVANR 149
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
L +PE+ + LQ+ +PKE+W + L+ G+ +C +P C C ++
Sbjct: 150 LKLGI-------AKTPEEMEKKLQKAIPKEDWAAAHHWLIYHGRKLCKARKPLCEECFLN 202
Query: 206 EYCPSAFK 213
CPSA K
Sbjct: 203 HVCPSAGK 210
>gi|407985415|ref|ZP_11166012.1| endonuclease III [Mycobacterium hassiacum DSM 44199]
gi|407372995|gb|EKF22014.1| endonuclease III [Mycobacterium hassiacum DSM 44199]
Length = 226
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 9/181 (4%)
Query: 30 LSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKI 89
++ +LS+ + DK + L + TA +AD +++LI P FY KA + ++
Sbjct: 26 VATILSAQSTDKRVNLTTPALFKR-YRTALDYARADRTELEELIRPTGFYRNKANALIRL 84
Query: 90 AKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWV 149
+ + ++DG +P +L+EL+ LPGIG K AN+++ F V G+ VDTH R+ R GW
Sbjct: 85 GQELVERFDGQVPDTLEELVTLPGIGRKTANVILG-NAFGVPGLTVDTHFSRLVRRWGWT 143
Query: 150 TQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP 209
+ P + A+ + + EW + ++ G+ +C +P CG+C +++ CP
Sbjct: 144 DH-------TDPVKIEFAVAELIERREWTDFSHRVIFHGRRVCHARKPACGVCVLAKDCP 196
Query: 210 S 210
S
Sbjct: 197 S 197
>gi|307150297|ref|YP_003885681.1| endonuclease III [Cyanothece sp. PCC 7822]
gi|306980525|gb|ADN12406.1| endonuclease III [Cyanothece sp. PCC 7822]
Length = 219
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 98/192 (51%), Gaps = 12/192 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P + A +LSA + +KV R A ++ A ++ LI FY
Sbjct: 37 PVQLLVATILSAQCTDERVNKVTPALFARF-----PDAPSLANASIEELETLIRSTGFYR 91
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA N++ + ++++ G++P +++LL+LPG+ K AN+V+ G+ +QG+ VDTHV
Sbjct: 92 NKAKNIQGACQKIVSQFGGEVPQQMEQLLSLPGVARKTANVVLAHGFGIIQGVTVDTHVK 151
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ RLG Q + P + L R LP+ +W + ++ G+ +C +P CG
Sbjct: 152 RLSGRLGLTEQ-------TDPIKIERDLMRLLPQPQWENFSIRIIYHGRAVCKARKPDCG 204
Query: 201 MCTVSEYCPSAF 212
+C ++ CP+A
Sbjct: 205 VCQLAHVCPAAI 216
>gi|377561238|ref|ZP_09790699.1| endonuclease III [Gordonia otitidis NBRC 100426]
gi|377521602|dbj|GAB35864.1| endonuclease III [Gordonia otitidis NBRC 100426]
Length = 228
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 13/190 (6%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYT 80
P E A +LSA + + + V + TA AD ++++I FY
Sbjct: 21 PLELSVATILSAQCTDVRVNMVTPALFAKY-----RTAADYAGADRTELEEMIRTTGFYR 75
Query: 81 RKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVH 140
KA ++ + + + ++DG++P +L EL++LPG G K AN+V+ F++ GI VDTH
Sbjct: 76 NKANSIIGLGQALVERFDGEVPHTLKELVSLPGFGRKTANVVLG-NAFDIPGITVDTHFS 134
Query: 141 RICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCG 200
R+ R GW T+ + P + A+ ++EW ++ ++ G+ +C +P CG
Sbjct: 135 RLVQRWGWTTE-------TDPVKIEHAVGELFERKEWTNLSHRVIFHGRRVCHARKPACG 187
Query: 201 MCTVSEYCPS 210
+C +++ CPS
Sbjct: 188 VCVLAKDCPS 197
>gi|331002520|ref|ZP_08326038.1| endonuclease III [Lachnospiraceae oral taxon 107 str. F0167]
gi|330410336|gb|EGG89770.1| endonuclease III [Lachnospiraceae oral taxon 107 str. F0167]
Length = 209
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 21 PKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDL---IYPVA 77
P + FA +LSA + D + + ++ ++++K A ++++ I+ +
Sbjct: 30 PWQLLFATILSA--------QCTDARVNMVTRDLYKKYDSLEKFASAKLEEMEKDIHSIG 81
Query: 78 FYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDT 137
FY KA N+ A+ L+ + G++PS L +LL LPG+G K AN++ F++ I VDT
Sbjct: 82 FYHNKAKNLIACARKLLSDFGGEVPSELKDLLTLPGVGRKTANVIRG-NIFDMPSIVVDT 140
Query: 138 HVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRP 197
HV RI +LG+ ++ P + L LPK+ W+ N L+ G+TIC R
Sbjct: 141 HVKRITKKLGFT-------QSDDPVKIEFELMEILPKDHWIVWNTDLITLGRTICIARRE 193
Query: 198 RCGMCTVSEYCPSA 211
+C +C + E CPSA
Sbjct: 194 KCDICFLREDCPSA 207
>gi|225870747|ref|YP_002746694.1| endonuclease III [Streptococcus equi subsp. equi 4047]
gi|225700151|emb|CAW94289.1| putative endonuclease III [Streptococcus equi subsp. equi 4047]
Length = 220
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 22 KERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTR 81
+E+ F +L++ +LS+ T DK + +L Q+ ++ + +A+ + ++D + + Y
Sbjct: 30 QEKPFQLLITVILSAQTTDKAVNKVTPKLWQSYPELSD-LAQANVSDVEDHLRTIGLYKN 88
Query: 82 KACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHR 141
KA N+ K A+ LT++DG +P + EL +LPG+G K AN+V+ + V I VDTHV R
Sbjct: 89 KAKNIIKTAQQLLTQFDGQVPKTHKELESLPGVGRKTANVVLA-EIYGVPAIAVDTHVSR 147
Query: 142 ICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGM 201
I RL ++ P + + L LPK++W+ + L+ FG+ C P+C
Sbjct: 148 IAKRLN-ISAPD-----ADVTEIEADLMAKLPKKDWIITHHRLIFFGRYHCLAKHPKCDT 201
Query: 202 CTVSEYC 208
C V YC
Sbjct: 202 CPVQSYC 208
>gi|448713761|ref|ZP_21702046.1| endonuclease III [Halobiforma nitratireducens JCM 10879]
gi|445789169|gb|EMA39860.1| endonuclease III [Halobiforma nitratireducens JCM 10879]
Length = 227
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 8/194 (4%)
Query: 25 RFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKAC 84
R +L++ +LS+ D+ + + L + E A + + + + + +Y KA
Sbjct: 35 RLELLIAVILSAQCTDERVNKETEHLFEK-YDGPEEYAAAPQDELAEDLDSITYYNNKAG 93
Query: 85 NMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICN 144
+K + + ++DG++P ++DEL L G+G K AN+V+ G V+GI VDTHV R+
Sbjct: 94 YIKSACEAIVEEHDGEVPDTMDELTDLSGVGRKTANVVLQHGHDVVEGIVVDTHVQRLSR 153
Query: 145 RLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTV 204
RLG T++K PE+ E L +P+ W + L + G+ +CT P C C +
Sbjct: 154 RLGL-----TEEK--RPERIEEELMEIVPEGYWQQFTHLCIDHGRAVCTARNPDCSDCVL 206
Query: 205 SEYCPSAFKESSTS 218
++ CPS +S
Sbjct: 207 ADICPSEKGDSDVD 220
>gi|415726092|ref|ZP_11470593.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis
00703Dmash]
gi|388063965|gb|EIK86533.1| Putative EndoIII-related endonuclease [Gardnerella vaginalis
00703Dmash]
Length = 223
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 2/186 (1%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ T DK + L + + ++ +A ++ +I P+ FY KA +
Sbjct: 36 FELLIATVLSAQTTDKRVNSVTPELF-DTFPDSHSLSEASVEQVESIIKPLGFYRVKAQH 94
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ ++ + + G +PS +++L +LPG+G K AN+V F + G VDTHV R+ R
Sbjct: 95 VIALSLRLESAFHGVVPSKMEDLTSLPGVGRKTANVVRG-NAFGLPGFPVDTHVIRVTGR 153
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LGW +K ++PE + + + +W ++ L+ G+ ICT P+C +C +
Sbjct: 154 LGWRKDCNKPKKYANPESIEKEITSYFDPADWANLSHRLILHGRKICTARNPKCALCPLK 213
Query: 206 EYCPSA 211
CPS+
Sbjct: 214 TTCPSS 219
>gi|225574096|ref|ZP_03782707.1| hypothetical protein RUMHYD_02161 [Blautia hydrogenotrophica DSM
10507]
gi|225038696|gb|EEG48942.1| endonuclease III [Blautia hydrogenotrophica DSM 10507]
Length = 210
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Query: 28 VLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMK 87
+L++ +LS+ D + + L Q T E +AD ++ I P FY KA N+
Sbjct: 33 LLIATMLSAQCTDARVNVVTKDLFQK-YDTMEKFAQADLRELEQDIKPTGFYHNKAKNII 91
Query: 88 KIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLG 147
A+ + +Y G++PS L+ L++LPG+G K AN++ F+ + VDTHV RI RLG
Sbjct: 92 GCAQRLVNEYGGEVPSDLEALVSLPGVGRKTANVIRG-NIFHEPSVVVDTHVKRISRRLG 150
Query: 148 WVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEY 207
+ P + + L + LP+E W+ N ++ FG+ IC P+C C +++Y
Sbjct: 151 LT-------REEDPVKIEKDLMKVLPREHWILYNIQIITFGRQICFARSPKCEECFLTKY 203
Query: 208 C 208
C
Sbjct: 204 C 204
>gi|327399428|ref|YP_004340297.1| endonuclease III [Hippea maritima DSM 10411]
gi|327182057|gb|AEA34238.1| endonuclease III [Hippea maritima DSM 10411]
Length = 204
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 100/184 (54%), Gaps = 9/184 (4%)
Query: 26 FAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACN 85
F +L++ +LS+ DK+ + +L + T EA+ +AD + +LI + + KA N
Sbjct: 25 FELLVALVLSARCTDKLTNKITPKLFE-IFPTPEALKEADYDELNELISSCSMHNTKAKN 83
Query: 86 MKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNR 145
+ IAK ++ +P SL+EL LPGIG K AN++++ G F + + VDTHV R+ NR
Sbjct: 84 LIAIAKALCEYHNCKVPESLEELTKLPGIGRKTANIILSFG-FGIPAVGVDTHVLRMANR 142
Query: 146 LGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVS 205
LG + + E +++ +PKE+W+ L+ G+ IC +P C C ++
Sbjct: 143 LGI-------SDSKKADVVEEEIKQKIPKEDWIVFYSGLILHGRHICKAKKPNCDECFLN 195
Query: 206 EYCP 209
+ CP
Sbjct: 196 DICP 199
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,535,733,555
Number of Sequences: 23463169
Number of extensions: 134403437
Number of successful extensions: 437394
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6319
Number of HSP's successfully gapped in prelim test: 3153
Number of HSP's that attempted gapping in prelim test: 419902
Number of HSP's gapped (non-prelim): 10101
length of query: 235
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 97
effective length of database: 9,121,278,045
effective search space: 884763970365
effective search space used: 884763970365
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)