Citrus Sinensis ID: 026645

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-----
MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLRKLER
cccccccccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHccHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccHHHHHccccccHHHHHHHHHHcccccccEEccccHHHHHHHHccccccccccccccHHHHHHHHHHHccHHHHHHHccHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHcc
*KTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCP**************************
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MKTLEPVYSLGVDETDSSLPPKERRFAVLLSALLSSLTKDKVADGALQRLLQNGLHTAEAIDKADEATIKDLIYPVAFYTRKACNMKKIAKICLTKYDGDIPSSLDELLALPGIGPKMANMVMTLGWFNVQGICVDTHVHRICNRLGWVTQPGTKQKTSSPEQTREALQRWLPKEEWVRINPLLVGFGQTICTPLRPRCGMCTVSEYCPSAFKESSTSSSKSKKSESSSLRKLER

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Endonuclease III-like protein 1 Has both an apurinic and/or apyrimidinic endonuclease activity and a DNA N-glycosylase activity. Incises damaged DNA at cytosines, thymines and guanines. Acts on a damaged strand, 5' from the damaged site. Required for the repair of both oxidative DNA damage and spontaneous mutagenic lesions.probableQ2KID2
Endonuclease III-like protein 1 Has both an apurinic and/or apyrimidinic endonuclease activity and a DNA N-glycosylase activity. Incises damaged DNA at cytosines, thymines and guanines. Acts on a damaged strand, 5' from the damaged site. Required for the repair of both oxidative DNA damage and spontaneous mutagenic lesions.probableO35980
Endonuclease III homolog Has both an apurinic and/or apyrimidinic endonuclease activity and a DNA N-glycosylase activity. Possesses glycosylase activity on different types of DNA substrates with pyrimidines damage. It can release both urea and thymine glycol from double-stranded polymers.probableQ8SRB8

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.2.-.-Carbon-oxygen lyases.probable
4.2.99.-Other carbon-oxygen lyases.probable
4.2.99.18Transferred entry: 4.2.99.18.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FSP, chain A
Confidence level:very confident
Coverage over the Query: 15-225
View the alignment between query and template
View the model in PyMOL