Your job contains 1 sequence.
>026646
MEIASSDNSDWLIDYSIVDDIPIAGNFDWPSQAAPAVNASSAASVTIDCSFGDSDGPKEV
EAGSRKRLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQ
MMEQLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPSGF
LPHPSSMSAAFAAQSQVAGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026646
(235 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2157538 - symbol:ILR3 "AT5G54680" species:3702... 638 1.8e-62 1
UNIPROTKB|Q6ZKI8 - symbol:OJ1119_D01.9 "BHLH transcriptio... 534 1.9e-51 1
UNIPROTKB|Q6ZGM4 - symbol:OJ1442_E05.19 "cDNA clone:006-3... 454 5.7e-43 1
TAIR|locus:2129710 - symbol:bHLH104 "AT4G14410" species:3... 454 5.7e-43 1
TAIR|locus:2086198 - symbol:bHLH34 "AT3G23210" species:37... 423 1.1e-39 1
UNIPROTKB|Q67U21 - symbol:OSJNBa0065F08.2 "Basic helix-lo... 256 5.5e-22 1
TAIR|locus:2092216 - symbol:bHLH121 "AT3G19860" species:3... 246 6.3e-21 1
TAIR|locus:2135169 - symbol:bHLH11 "AT4G36060" species:37... 238 4.4e-20 1
UNIPROTKB|Q2R1K8 - symbol:Os11g0601700 "Helix-loop-helix ... 167 2.3e-12 1
UNIPROTKB|Q69V10 - symbol:P0506F02.119 "cDNA clone:J02306... 156 3.5e-11 1
TAIR|locus:2079102 - symbol:PYE "AT3G47640" species:3702 ... 153 4.5e-11 1
UNIPROTKB|Q60EM5 - symbol:OJ1651_D06.8 "Putative uncharac... 111 2.1e-06 1
TAIR|locus:2164605 - symbol:AT5G56960 "AT5G56960" species... 127 7.2e-06 1
TAIR|locus:2026629 - symbol:EGL3 "AT1G63650" species:3702... 126 1.4e-05 1
TAIR|locus:2062230 - symbol:AT2G22760 "AT2G22760" species... 120 2.4e-05 1
TAIR|locus:2141055 - symbol:MYC4 "AT4G17880" species:3702... 120 7.6e-05 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 116 8.6e-05 1
UNIPROTKB|G3N2J6 - symbol:TNIP3 "Uncharacterized protein"... 115 0.00010 1
UNIPROTKB|Q84R60 - symbol:OSJNBb0113I20.8 "Putative ammon... 115 0.00014 1
TAIR|locus:2178555 - symbol:MYC3 "AT5G46760" species:3702... 116 0.00023 1
RGD|3092 - symbol:Mitf "microphthalmia-associated transcr... 92 0.00032 1
UNIPROTKB|O88368 - symbol:Mitf "Microphthalmia-associated... 92 0.00032 1
UNIPROTKB|Q336P5 - symbol:Os10g0575000 "Os10g0575000 prot... 115 0.00038 1
UNIPROTKB|Q2QLR0 - symbol:LOC_Os12g43620 "Helix-loop-heli... 110 0.00050 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 109 0.00053 1
UNIPROTKB|Q5SMX2 - symbol:P0498B01.25 "Basic helix-loop-h... 111 0.00054 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 110 0.00058 1
UNIPROTKB|Q60443 - symbol:Q60443 "Kinesin-like protein KI... 112 0.00075 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 108 0.00077 1
>TAIR|locus:2157538 [details] [associations]
symbol:ILR3 "AT5G54680" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022214
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000238732 UniGene:At.49177
UniGene:At.9639 EMBL:AF488629 EMBL:AY054585 EMBL:BT002189
EMBL:AY086197 IPI:IPI00530460 RefSeq:NP_200279.1
ProteinModelPortal:Q9FH37 SMR:Q9FH37 IntAct:Q9FH37 STRING:Q9FH37
EnsemblPlants:AT5G54680.1 GeneID:835557 KEGG:ath:AT5G54680
TAIR:At5g54680 eggNOG:NOG277469 InParanoid:Q9FH37 OMA:MASPEGT
PhylomeDB:Q9FH37 ProtClustDB:CLSN2916456 Genevestigator:Q9FH37
Uniprot:Q9FH37
Length = 234
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 136/238 (57%), Positives = 160/238 (67%)
Query: 3 IASSDNSDWLIDYSIVD--DIPIAG-NFDWXXXXXXXXXXXXXXXXTIDCSFGDSDGPKE 59
+ S +N++W+ D D I G F W +D S G+S+ KE
Sbjct: 1 MVSPENANWICDLIDADYGSFTIQGPGFSWPVQQPIGVSSNSSAG--VDGSAGNSEASKE 58
Query: 60 VEAGSRKRLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAV 119
GS+KR R ES + SKACREK RRDRLN++F+ELG++LEPG PPKTDKA IL DAV
Sbjct: 59 --PGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGAILEPGNPPKTDKAAILVDAV 116
Query: 120 QMMEQLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS- 178
+M+ QLR EAQKLK SN +LQ+KIKELK EKNELRDEKQRLK +KEKLEQQ+KAM+AP
Sbjct: 117 RMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQRLKTEKEKLEQQLKAMNAPQP 176
Query: 179 GFLPHPXXXXXXXXXXXXXX-GNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235
F P P GNK+VP I YPGVAMWQFMPPA+VDTSQDHVLRPPVA
Sbjct: 177 SFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFMPPASVDTSQDHVLRPPVA 234
>UNIPROTKB|Q6ZKI8 [details] [associations]
symbol:OJ1119_D01.9 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:HQ858852 EMBL:AP003876 EMBL:AK102951
RefSeq:NP_001060960.1 UniGene:Os.18333 IntAct:Q6ZKI8
EnsemblPlants:LOC_Os08g04390.2 GeneID:4344627 KEGG:osa:4344627
OMA:REKMRRN Uniprot:Q6ZKI8
Length = 253
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 116/238 (48%), Positives = 150/238 (63%)
Query: 10 DWLIDYSIVDDIPIA--GNFDWXXXXXXXXXXXXXXXXTIDCSFGDSDGPKEVEAGSRKR 67
DW +D I++D+P A G F W S+ ++ E GS KR
Sbjct: 22 DWFLDCGILEDLPAAACGAFPWDASPSCSNPSVEVS------SYVNTTSYVLKEPGSNKR 75
Query: 68 LRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRT 127
+RS SC SKA REK+RRD++N+RFLELG+ LEPG+P K+DKA ILSDA +M+ QLR
Sbjct: 76 VRSGSCGRPTSKASREKIRRDKMNDRFLELGTTLEPGKPVKSDKAAILSDATRMVIQLRA 135
Query: 128 EAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPSGFLPHPXXX 187
EA++LK +NE+L++KIKELKAEK+ELRDEKQ+LK +KE LEQQVK ++A ++PHP
Sbjct: 136 EAKQLKDTNESLEDKIKELKAEKDELRDEKQKLKVEKETLEQQVKILTATPAYMPHPTLM 195
Query: 188 XX---------XXXXXXXXXGNKLV-PFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235
G KL+ PF+GYPG MWQFMPP+ VDTS+D PPVA
Sbjct: 196 PAPYPQAPLAPFHHAQGQAAGQKLMMPFVGYPGYPMWQFMPPSEVDTSKDSEACPPVA 253
>UNIPROTKB|Q6ZGM4 [details] [associations]
symbol:OJ1442_E05.19 "cDNA clone:006-303-B03, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG277469
EMBL:AP004121 EMBL:EU837263 EMBL:HQ858854 EMBL:AK060881
EMBL:AK103434 EMBL:AK104188 RefSeq:NP_001045680.1 UniGene:Os.17893
EnsemblPlants:LOC_Os02g02480.1 EnsemblPlants:LOC_Os02g02480.3
GeneID:4328080 KEGG:osa:4328080 OMA:AIFCDGG Uniprot:Q6ZGM4
Length = 236
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 103/181 (56%), Positives = 125/181 (69%)
Query: 66 KRLRSESCCVSG--SKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMME 123
KR R ES SG SKACREK+RRDRLN+RFLEL S++ P + K DKA ILSDA +++
Sbjct: 57 KRGRDESSS-SGPKSKACREKIRRDRLNDRFLELSSVINPDKQAKLDKANILSDAARLLA 115
Query: 124 QLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMS-APSGF-- 180
+LR EA+KLK+SNE L+E IK+LK EKNELRDEK LKA+KE+LEQQVKA+S AP+GF
Sbjct: 116 ELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALSVAPTGFVP 175
Query: 181 -LPHPXXXXXXXXXXXX----XXGNKLVPF-IGYPGVAMWQFMPPAAVDTSQDHVLRPPV 234
LPHP GNK P + G+AMWQ++PP AVDT+QD L PP
Sbjct: 176 HLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAMWQWLPPTAVDTTQDPKLWPPN 235
Query: 235 A 235
A
Sbjct: 236 A 236
>TAIR|locus:2129710 [details] [associations]
symbol:bHLH104 "AT4G14410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161538 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:Z97336 HOGENOM:HOG000238732
ProtClustDB:CLSN2689429 EMBL:AF488628 EMBL:AY102106 EMBL:AY133565
EMBL:AY088053 IPI:IPI00527516 IPI:IPI00532570 PIR:B71406
RefSeq:NP_567431.1 RefSeq:NP_849383.1 UniGene:At.4272
ProteinModelPortal:Q8L467 SMR:Q8L467 EnsemblPlants:AT4G14410.1
GeneID:827086 KEGG:ath:AT4G14410 TAIR:At4g14410 eggNOG:NOG307178
InParanoid:Q8L467 OMA:TKACRER PhylomeDB:Q8L467
Genevestigator:Q8L467 Uniprot:Q8L467
Length = 283
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 95/174 (54%), Positives = 123/174 (70%)
Query: 64 SRKRLRSESCCVSG-SKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMM 122
SRKR R+ SC G +KACRE+LRR++LNERF++L S+LEPGR PKTDK IL DA++++
Sbjct: 119 SRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDDAIRIL 178
Query: 123 EQLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS-GFL 181
QLR EA KL+++N+ L E+IK LKAEKNELR+EK LKADKEK EQQ+K+M+APS GF+
Sbjct: 179 NQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAPSSGFI 238
Query: 182 PHPXXXXXXXXXXXXXXGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235
PH NK+ + Y + MW +MP + DTS+D LRPP A
Sbjct: 239 PH---------IPAAFNHNKMAVYPSYGYMPMWHYMPQSVRDTSRDQELRPPAA 283
>TAIR|locus:2086198 [details] [associations]
symbol:bHLH34 "AT3G23210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025608 EMBL:AY099674 EMBL:AY128853 EMBL:AF488573
IPI:IPI00543123 RefSeq:NP_188962.2 UniGene:At.6338
ProteinModelPortal:Q9LTC7 SMR:Q9LTC7 EnsemblPlants:AT3G23210.1
GeneID:821899 KEGG:ath:AT3G23210 TAIR:At3g23210 eggNOG:NOG287253
HOGENOM:HOG000238732 InParanoid:Q9LTC7 OMA:NEDNIFQ PhylomeDB:Q9LTC7
ProtClustDB:CLSN2689429 Genevestigator:Q9LTC7 Uniprot:Q9LTC7
Length = 320
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 91/178 (51%), Positives = 121/178 (67%)
Query: 61 EAGSRKRLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQ 120
E S KR R+ SC G+KACREKLRR++LN++F++L S+LEPGR PKTDK+ IL DA++
Sbjct: 149 EECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIR 208
Query: 121 MMEQLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKAMSAPS-G 179
++ QLR EA +L+++N+ L E+IK LKA+KNELR+EK LKA+KEK+EQQ+K+M PS G
Sbjct: 209 VVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEKMEQQLKSMVVPSPG 268
Query: 180 FLP--HPXXXXXXXXXXXXXXGNKLVPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA 235
F+P HP G P P + MW +PPA DTS+D PPVA
Sbjct: 269 FMPSQHPAAFHSHKMAVAYPYG--YYP----PNMPMWSPLPPADRDTSRDLKNLPPVA 320
>UNIPROTKB|Q67U21 [details] [associations]
symbol:OSJNBa0065F08.2 "Basic helix-loop-helix-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG237057
EMBL:HQ858850 EMBL:AP005770 EMBL:AK069790 EMBL:AK103986
RefSeq:NP_001046730.1 UniGene:Os.52897
EnsemblPlants:LOC_Os02g23823.1 GeneID:4329217 KEGG:osa:4329217
OMA:RNDKATI ProtClustDB:CLSN2692698 Uniprot:Q67U21
Length = 343
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 57/125 (45%), Positives = 78/125 (62%)
Query: 48 DCSFGDSDGPKEVEAGSRKRLRSESCCVSGS--KACREKLRRDRLNERFLELGSMLEPGR 105
D F DG ++ + +++ + KA REK+RRDRLNE+F ELGS L+P R
Sbjct: 11 DGFFHPRDGACPADSSGKTECKTQGSIATRKVQKADREKMRRDRLNEQFQELGSTLDPDR 70
Query: 106 PPKTDKATILSDAVQMMEQLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKE 165
P + DKATILSDA+QM++ L ++ KLK +L E+ +EL EKNELRDEK LK + +
Sbjct: 71 P-RNDKATILSDAIQMLKDLTSQVNKLKAEYTSLSEEARELTQEKNELRDEKVSLKFEVD 129
Query: 166 KLEQQ 170
L Q
Sbjct: 130 NLNTQ 134
>TAIR|locus:2092216 [details] [associations]
symbol:bHLH121 "AT3G19860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB025631
HOGENOM:HOG000005852 EMBL:AF488633 EMBL:AY065107 EMBL:AY081703
IPI:IPI00517171 IPI:IPI00657162 RefSeq:NP_001030729.1
RefSeq:NP_188620.1 UniGene:At.20167 ProteinModelPortal:Q9LT23
SMR:Q9LT23 IntAct:Q9LT23 STRING:Q9LT23 EnsemblPlants:AT3G19860.2
GeneID:821523 KEGG:ath:AT3G19860 TAIR:At3g19860 eggNOG:NOG237057
InParanoid:Q9LT23 OMA:GSIPMHP PhylomeDB:Q9LT23
ProtClustDB:CLSN2684712 Genevestigator:Q9LT23 Uniprot:Q9LT23
Length = 337
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 53/109 (48%), Positives = 77/109 (70%)
Query: 79 KACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSNEN 138
KA REKLRR++LNE F+ELG++L+P RP K DKATIL+D VQ++++L +E KLK
Sbjct: 63 KAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTA 121
Query: 139 LQEKIKELKAEKNELRDEKQRLKADKEKL----EQQVKAMSAPSGFLPH 183
L ++ +EL EKN+LR+EK LK+D E L +Q++++MS + H
Sbjct: 122 LTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDH 170
>TAIR|locus:2135169 [details] [associations]
symbol:bHLH11 "AT4G36060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161588
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022373 EMBL:AF251696
EMBL:AY090362 EMBL:BT000535 IPI:IPI00517622 IPI:IPI00521706
PIR:T05498 RefSeq:NP_195330.2 RefSeq:NP_849566.1 UniGene:At.43990
ProteinModelPortal:Q8W2F2 SMR:Q8W2F2 IntAct:Q8W2F2 PRIDE:Q8W2F2
EnsemblPlants:AT4G36060.1 GeneID:829762 KEGG:ath:AT4G36060
TAIR:At4g36060 eggNOG:NOG307055 HOGENOM:HOG000005852 OMA:PYSASVN
PhylomeDB:Q8W2F2 ProtClustDB:CLSN2690363 Genevestigator:Q8W2F2
Uniprot:Q8W2F2
Length = 286
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 51/117 (43%), Positives = 78/117 (66%)
Query: 68 LRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRT 127
++ E+ C KA REKLRRD+L E+FLELG+ L+P RP K+DKA++L+D +QM++ +
Sbjct: 40 VKKEAVC--SQKAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMN 96
Query: 128 EAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVK-AMSAPSGFLPH 183
+ +LK E L ++ +EL EK+ELR+EK LK+D E L Q + + ++PH
Sbjct: 97 QVDRLKAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWVPH 153
>UNIPROTKB|Q2R1K8 [details] [associations]
symbol:Os11g0601700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 EMBL:AP008217 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000148 HOGENOM:HOG000070871 RefSeq:NP_001068228.1
UniGene:Os.27243 EnsemblPlants:LOC_Os11g38870.1 GeneID:4350864
KEGG:osa:4350864 eggNOG:NOG323604 OMA:LVSERQY
ProtClustDB:CLSN2698640 Uniprot:Q2R1K8
Length = 278
Score = 167 (63.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 43/126 (34%), Positives = 70/126 (55%)
Query: 50 SFGDSDGPKEVEA--GSRKRLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPP 107
S G S +A GS + E KA REKL+RD+LN+ F+EL SML+P R
Sbjct: 20 SLGGSSNAASDKAVDGSLDKRSQEKAPKKTHKAEREKLKRDQLNDLFVELSSMLDPERQ- 78
Query: 108 KTDKATILSDAVQMMEQLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKL 167
+ KAT+L DA +++ L ++ + L++ L + + + +E NEL++E L+A +L
Sbjct: 79 NSGKATVLGDAARVLRDLVSQVESLRKEQSALLTERQYVGSENNELQEENIMLRAQILEL 138
Query: 168 EQQVKA 173
++ A
Sbjct: 139 HNEICA 144
>UNIPROTKB|Q69V10 [details] [associations]
symbol:P0506F02.119 "cDNA clone:J023068N18, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008213
EMBL:CM000144 EMBL:HQ858856 EMBL:AP004260 EMBL:AP004306
EMBL:AK070963 RefSeq:NP_001060350.1 UniGene:Os.34549 STRING:Q69V10
EnsemblPlants:LOC_Os07g43530.1 EnsemblPlants:LOC_Os07g43530.2
GeneID:4343984 KEGG:osa:4343984 eggNOG:NOG310955 OMA:NESHYVA
ProtClustDB:CLSN2693968 Uniprot:Q69V10
Length = 265
Score = 156 (60.0 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/94 (31%), Positives = 60/94 (63%)
Query: 79 KACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSNEN 138
K+ REKL+RD+ N+ F ELG++LEP R KA +L + ++++ L ++ + L++ N +
Sbjct: 40 KSEREKLKRDKQNDLFNELGNLLEPDRQ-NNGKACVLGETTRILKDLLSQVESLRKENSS 98
Query: 139 LQEKIKELKAEKNELRDEKQRLKADKEKLEQQVK 172
L+ + + E+NEL D+ L+ + +L+ +++
Sbjct: 99 LKNESHYVALERNELHDDNSMLRTEILELQNELR 132
>TAIR|locus:2079102 [details] [associations]
symbol:PYE "AT3G47640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010106 "cellular response to iron ion starvation"
evidence=IMP] [GO:0055072 "iron ion homeostasis" evidence=IMP]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0055072
EMBL:AY080786 EMBL:AY114018 EMBL:AL132955 EMBL:AF488582
IPI:IPI00539041 PIR:T45724 RefSeq:NP_001190029.1
RefSeq:NP_001190030.1 RefSeq:NP_190348.1 UniGene:At.43911
ProteinModelPortal:Q9SN74 SMR:Q9SN74 IntAct:Q9SN74 STRING:Q9SN74
PRIDE:Q9SN74 EnsemblPlants:AT3G47640.1 EnsemblPlants:AT3G47640.2
EnsemblPlants:AT3G47640.3 GeneID:823918 KEGG:ath:AT3G47640
TAIR:At3g47640 eggNOG:NOG254857 HOGENOM:HOG000070871
InParanoid:Q9SN74 OMA:QSKPDLN PhylomeDB:Q9SN74
ProtClustDB:CLSN2913351 Genevestigator:Q9SN74 GO:GO:0010106
Uniprot:Q9SN74
Length = 240
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 37/125 (29%), Positives = 69/125 (55%)
Query: 54 SDGPKEVEAGSRKRLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKTDKAT 113
S E A + +R R +KA RE+L+R+ LNE F+EL LE + + KA+
Sbjct: 7 STSSDEANATADERCRKGKVPKRINKAVRERLKREHLNELFIELADTLELNQQ-NSGKAS 65
Query: 114 ILSDAVQMMEQLRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQVKA 173
IL +A + ++ + + + L++ + +L + + EKNEL++E L+ + KL+ +++A
Sbjct: 66 ILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEA 125
Query: 174 MSAPS 178
+ S
Sbjct: 126 RANQS 130
>UNIPROTKB|Q60EM5 [details] [associations]
symbol:OJ1651_D06.8 "Putative uncharacterized protein
OJ1651_D06.8" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634 EMBL:AP008211
HOGENOM:HOG000238732 eggNOG:NOG277469 EMBL:AC111016
RefSeq:NP_001055722.2 UniGene:Os.49628 STRING:Q60EM5 GeneID:4338978
KEGG:osa:4338978 Uniprot:Q60EM5
Length = 77
Score = 111 (44.1 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 175 SAPSGFLPHPXXXXXXXXX----XXXXXGNKLVPFI-GY-PGVAMWQFMPPAAVDTSQDH 228
+AP+ F+PH G K VP+ Y P A WQ++PP ++DTS+D
Sbjct: 11 AAPAPFVPHHAAAVAAAPAYHPAAFAQAGGKYVPYATSYAPPAAFWQWIPPTSLDTSKDP 70
Query: 229 VLRPPVA 235
V+ PPVA
Sbjct: 71 VMWPPVA 77
>TAIR|locus:2164605 [details] [associations]
symbol:AT5G56960 "AT5G56960" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010200 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB024035 IPI:IPI00545938 RefSeq:NP_200506.1 UniGene:At.55597
ProteinModelPortal:Q9LTS4 SMR:Q9LTS4 EnsemblPlants:AT5G56960.1
GeneID:835798 KEGG:ath:AT5G56960 TAIR:At5g56960 eggNOG:NOG254434
HOGENOM:HOG000095216 InParanoid:Q9LTS4 OMA:RENATTH PhylomeDB:Q9LTS4
ProtClustDB:CLSN2687375 Genevestigator:Q9LTS4 Uniprot:Q9LTS4
Length = 466
Score = 127 (49.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSNENLQEK 142
E+ RR++LNE F L S+L PG K DKA++LS A + + L+ E KL + N ++ K
Sbjct: 294 ERKRREKLNESFQALRSLLPPGT--KKDKASVLSIAREQLSSLQGEISKLLERNREVEAK 351
Query: 143 IKELKAEKNELRDEKQ 158
+ + +N+LR E++
Sbjct: 352 LAGEREIENDLRPEER 367
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 126 (49.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/88 (31%), Positives = 52/88 (59%)
Query: 76 SGSKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQS 135
+G+ A EK RR++LNERF+ L S++ P K DK +IL D ++ ++ L+ Q+L+
Sbjct: 403 TGNHALSEKKRREKLNERFMTLRSII-PSIS-KIDKVSILDDTIEYLQDLQKRVQELESC 460
Query: 136 NENLQEKIKELKAEKNELRDEKQRLKAD 163
E+ + + ++ + DE++R A+
Sbjct: 461 RESADTETRITMMKRKKPDDEEERASAN 488
>TAIR|locus:2062230 [details] [associations]
symbol:AT2G22760 "AT2G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000240300
EMBL:AF488563 EMBL:DQ446550 EMBL:DQ653016 IPI:IPI00530407
PIR:E84616 RefSeq:NP_179861.2 UniGene:At.39393
ProteinModelPortal:Q1PF16 SMR:Q1PF16 IntAct:Q1PF16 PRIDE:Q1PF16
EnsemblPlants:AT2G22760.1 GeneID:816806 KEGG:ath:AT2G22760
TAIR:At2g22760 eggNOG:NOG292366 InParanoid:Q1PF16 OMA:GCMINIL
PhylomeDB:Q1PF16 ProtClustDB:CLSN2690866 Genevestigator:Q1PF16
Uniprot:Q1PF16
Length = 295
Score = 120 (47.3 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 28/79 (35%), Positives = 50/79 (63%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSNENLQEK 142
E+ RR++L+E+F+ L ++L PG K DK TIL DA+ M+QL+ + + LK+ E ++
Sbjct: 124 ERKRREKLSEKFIALSALL-PGLK-KADKVTILDDAISRMKQLQEQLRTLKEEKEATRQM 181
Query: 143 IKELKAEKNELR-DEKQRL 160
+ +K+++ DE+ L
Sbjct: 182 ESMILVKKSKVFFDEEPNL 200
>TAIR|locus:2141055 [details] [associations]
symbol:MYC4 "AT4G17880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0045893 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0003677 GO:GO:0009718
GO:GO:0003700 GO:GO:0006351 EMBL:AL161547 EMBL:AL021889
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 eggNOG:NOG295658
ProtClustDB:CLSN2686023 EMBL:AF251689 EMBL:AK221507 IPI:IPI00540927
PIR:T05074 RefSeq:NP_193522.1 UniGene:At.28316
ProteinModelPortal:O49687 SMR:O49687 EnsemblPlants:AT4G17880.1
GeneID:827511 KEGG:ath:AT4G17880 TAIR:At4g17880 InParanoid:O49687
OMA:SCERARQ PhylomeDB:O49687 Genevestigator:O49687 Uniprot:O49687
Length = 589
Score = 120 (47.3 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 30/93 (32%), Positives = 54/93 (58%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSNENLQEK 142
E+ RR++LN+RF L +++ P K DKA++L DA+ + +L+++ QK + E LQ++
Sbjct: 421 ERQRREKLNQRFYSLRAVV-PN-VSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQ 478
Query: 143 I----KELKAEKNELRDEKQRLKADKEKLEQQV 171
I KE K+ ++D K + +E +V
Sbjct: 479 IDVMNKEAGNAKSSVKDRKCLNQESSVLIEMEV 511
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 116 (45.9 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSN---ENL 139
E+ RR +LNER + L ++L PG KTDKAT+L DA++ ++QL+ +KL++ + +
Sbjct: 137 ERKRRQKLNERLIALSALL-PGLK-KTDKATVLEDAIKHLKQLQERVKKLEEERVVTKKM 194
Query: 140 QEKIKELKAEKNELRDE 156
+ I +K + L D+
Sbjct: 195 DQSIILVKRSQVYLDDD 211
>UNIPROTKB|G3N2J6 [details] [associations]
symbol:TNIP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0034142 "toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0002756
"MyD88-independent toll-like receptor signaling pathway"
evidence=IEA] GO:GO:0071222 GO:GO:0043124 GO:GO:0034142
GO:GO:0002756 GeneTree:ENSGT00510000046908 OMA:LEQKIRC
EMBL:DAAA02044851 Ensembl:ENSBTAT00000064143 Uniprot:G3N2J6
Length = 298
Score = 115 (45.5 bits), Expect = 0.00010, P = 0.00010
Identities = 36/127 (28%), Positives = 65/127 (51%)
Query: 58 KEVEAGSRKRLRSESCCVSG-SKACREKLRRDRLNERFLELG-SMLEPGRPPKTDKATIL 115
KE A + + C + +KA ++ L+ D + LG S +E R + +L
Sbjct: 114 KEKNALMNHKKQHYECEIKRLNKALQDALKVDCSSSPEDRLGKSEMECSREEMRTEMEVL 173
Query: 116 SDAVQMMEQ----LRTEAQKLKQSNENLQEKIKELKAEKNELRDEKQRLKADKEKLEQQV 171
VQ+ E+ R++ ++LKQ E LQ+ I+ +++ N L + + + +KEKLE+Q+
Sbjct: 174 KQQVQIYEEDFKKERSDRERLKQEKEELQQIIQTSQSQLNRLNSQIKACQMEKEKLERQL 233
Query: 172 KAMSAPS 178
K M P+
Sbjct: 234 KQMCFPT 240
>UNIPROTKB|Q84R60 [details] [associations]
symbol:OSJNBb0113I20.8 "Putative ammonium transporter"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P22415 EMBL:AC116369 ProteinModelPortal:Q84R60 Gramene:Q84R60
Uniprot:Q84R60
Length = 353
Score = 115 (45.5 bits), Expect = 0.00014, P = 0.00014
Identities = 25/62 (40%), Positives = 45/62 (72%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQ-SNENLQE 141
E+ RR+++N+RF+EL +++ PG K DKATILSDAV+ +++++ + +L+Q N ++
Sbjct: 197 ERKRREKINQRFIELSTVI-PGLK-KMDKATILSDAVRYVKEMQEKLSELEQHQNGGVES 254
Query: 142 KI 143
I
Sbjct: 255 AI 256
>TAIR|locus:2178555 [details] [associations]
symbol:MYC3 "AT5G46760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=IMP] [GO:0009753 "response to jasmonic acid stimulus"
evidence=IMP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006952 "defense response"
evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
evidence=IPI] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0006952 GO:GO:0009753 GO:GO:0003677
GO:GO:0009718 GO:GO:0003700 GO:GO:0006351 EMBL:AB016882
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238207
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251690 IPI:IPI00533290
RefSeq:NP_199488.1 UniGene:At.28315 ProteinModelPortal:Q9FIP9
SMR:Q9FIP9 DIP:DIP-58585N PaxDb:Q9FIP9 PRIDE:Q9FIP9
EnsemblPlants:AT5G46760.1 GeneID:834719 KEGG:ath:AT5G46760
TAIR:At5g46760 eggNOG:NOG295658 InParanoid:Q9FIP9 OMA:TASSIEM
PhylomeDB:Q9FIP9 ProtClustDB:CLSN2686023 Genevestigator:Q9FIP9
Uniprot:Q9FIP9
Length = 592
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 28/93 (30%), Positives = 53/93 (56%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSNENLQEK 142
E+ RR++LN+RF L +++ P K DKA++L DA+ + +L+++ Q+ + E +Q+K
Sbjct: 420 ERQRREKLNQRFYSLRAVV-PN-VSKMDKASLLGDAISYINELKSKLQQAESDKEEIQKK 477
Query: 143 IKELKAEKNELRDEKQRLKADKEKLEQQVKAMS 175
+ + E N + R K +++ Q A S
Sbjct: 478 LDGMSKEGNNGKGCGSRAK-ERKSSNQDSTASS 509
>RGD|3092 [details] [associations]
symbol:Mitf "microphthalmia-associated transcription factor"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISO] [GO:0006461 "protein complex
assembly" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0030154 "cell differentiation" evidence=ISO]
[GO:0030316 "osteoclast differentiation" evidence=IEA;ISO]
[GO:0030318 "melanocyte differentiation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=IEA;ISO]
[GO:0042981 "regulation of apoptotic process" evidence=ISO]
[GO:0043010 "camera-type eye development" evidence=IEA;ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0043473 "pigmentation" evidence=ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=IEA;ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046849 "bone remodeling" evidence=IEA;ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR011598 InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234
GO:GO:0006461 GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010 GO:GO:0045670
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014 GO:GO:0030318
GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286 HOGENOM:HOG000231368
OrthoDB:EOG495ZRR EMBL:AF029886 IPI:IPI00563001 UniGene:Rn.31427
ProteinModelPortal:O88368 STRING:O88368 UCSC:RGD:3092
InParanoid:O88368 ArrayExpress:O88368 Genevestigator:O88368
GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 92 (37.4 bits), Expect = 0.00032, P = 0.00032
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPP--KTDKATILSDAVQMMEQLRTEAQKLKQSNENLQ 140
E+ RR +N+R ELG+++ P + +K TIL +V + +L+ E Q+ K EN Q
Sbjct: 29 ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDL-ENRQ 87
Query: 141 EKIK 144
+K++
Sbjct: 88 KKLE 91
>UNIPROTKB|O88368 [details] [associations]
symbol:Mitf "Microphthalmia-associated transcription
factor" species:10116 "Rattus norvegicus" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
InterPro:IPR024097 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
RGD:3092 GO:GO:0005634 GO:GO:0043066 GO:GO:0043234 GO:GO:0006461
GO:GO:0016055 GO:GO:0003677 GO:GO:0046849 GO:GO:0003682
GO:GO:0003705 GO:GO:0042127 GO:GO:0001077 GO:GO:0043010
GO:GO:0045670 Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
GO:GO:0030318 GO:GO:0045165 GO:GO:0030316 eggNOG:NOG251286
HOGENOM:HOG000231368 OrthoDB:EOG495ZRR EMBL:AF029886
IPI:IPI00563001 UniGene:Rn.31427 ProteinModelPortal:O88368
STRING:O88368 UCSC:RGD:3092 InParanoid:O88368 ArrayExpress:O88368
Genevestigator:O88368 GermOnline:ENSRNOG00000008658 Uniprot:O88368
Length = 110
Score = 92 (37.4 bits), Expect = 0.00032, P = 0.00032
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPP--KTDKATILSDAVQMMEQLRTEAQKLKQSNENLQ 140
E+ RR +N+R ELG+++ P + +K TIL +V + +L+ E Q+ K EN Q
Sbjct: 29 ERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDL-ENRQ 87
Query: 141 EKIK 144
+K++
Sbjct: 88 KKLE 91
>UNIPROTKB|Q336P5 [details] [associations]
symbol:Os10g0575000 "Os10g0575000 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238207 InterPro:IPR025610
Pfam:PF14215 eggNOG:NOG295658 KO:K13422 RefSeq:NP_001065478.1
UniGene:Os.100484 STRING:Q336P5 GeneID:4349484 KEGG:osa:4349484
ProtClustDB:CLSN2698296 Uniprot:Q336P5
Length = 699
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 32/97 (32%), Positives = 53/97 (54%)
Query: 57 PKEVEAGSRKRLRSESCCVSG--SKACREKLRRDRLNERFLELGSMLEPGRPPKTDKATI 114
P E E RKR R + + E+ RR++LN+RF L +++ P K DKA++
Sbjct: 501 PPEAEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVV-PN-VSKMDKASL 558
Query: 115 LSDAVQMMEQLRTEAQKLKQSNENLQEKIKELKAEKN 151
L DA+ + +LR + L+ E LQ +++ LK E++
Sbjct: 559 LGDAISYINELRGKLTALETDKETLQSQMESLKKERD 595
>UNIPROTKB|Q2QLR0 [details] [associations]
symbol:LOC_Os12g43620 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011
KEGG:dosa:Os12t0632600-00 Gramene:Q2QLR0 OMA:TNVMPFP Uniprot:Q2QLR0
Length = 338
Score = 110 (43.8 bits), Expect = 0.00050, P = 0.00050
Identities = 22/54 (40%), Positives = 41/54 (75%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSN 136
E+ RR+++N+RF+EL +++ PG K DKATIL DAV+ +++L+ + + L++ +
Sbjct: 172 ERRRREKINQRFIELSTVI-PGLK-KMDKATILGDAVKYVKELQEKVKTLEEED 223
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 109 (43.4 bits), Expect = 0.00053, P = 0.00053
Identities = 30/89 (33%), Positives = 47/89 (52%)
Query: 49 CSFGDSDGPKEVEAGSRK-RLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPP 107
C ++ G E E +R R R + + EK RR R+NE+ L S++ P
Sbjct: 6 CESEEALGSSESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLI-PNSS- 63
Query: 108 KTDKATILSDAVQMMEQLRTEAQKLKQSN 136
KTDKA++L DA++ ++QL+ + Q L N
Sbjct: 64 KTDKASMLDDAIEYLKQLQLQVQMLSMRN 92
>UNIPROTKB|Q5SMX2 [details] [associations]
symbol:P0498B01.25 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003417 ProteinModelPortal:Q5SMX2
EnsemblPlants:LOC_Os01g09930.1 Gramene:Q5SMX2 HOGENOM:HOG000237612
OMA:IRAREHI Uniprot:Q5SMX2
Length = 412
Score = 111 (44.1 bits), Expect = 0.00054, P = 0.00054
Identities = 29/98 (29%), Positives = 54/98 (55%)
Query: 83 EKLRRDRLNERFLELGSMLEPGRPPKTDKATILSDAVQMMEQLRTEAQKLKQSNENLQEK 142
E+ RR++LN+ F+ L ++L G K DKA+IL A + ++ L ++ +L++ N L+ +
Sbjct: 189 ERKRREKLNDSFVALKAVLPTGS--KKDKASILIRAREHIKSLESKLSELEEKNRELEAR 246
Query: 143 IKELKAEKNELRDEKQRLKADKEKLEQQVKA-MSAPSG 179
+ A KN+ + D+ K E V+ ++ SG
Sbjct: 247 LASRPAAKNDKGETAAAEAGDETKREDLVEIEVTTTSG 284
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 110 (43.8 bits), Expect = 0.00058, P = 0.00058
Identities = 32/122 (26%), Positives = 62/122 (50%)
Query: 53 DSDGPKEV---EAGSRKRLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKT 109
D++G ++ EAG R + + E+ RRDR+N+R L +L K
Sbjct: 145 DTEGDEQETRGEAGRSNGRRGRAAAIHNES---ERRRRDRINQRMRTLQKLLPTAS--KA 199
Query: 110 DKATILSDAVQMMEQLRTEAQKLK-QSNENLQEKIKELKAEKNELRDEKQRLKADKEKLE 168
DK +IL D ++ ++QL+ + Q + ++N Q I +L ++ L + Q+ + +++ +
Sbjct: 200 DKVSILDDVIEHLKQLQAQVQFMSLRANLPQQMMIPQLPPPQSVLSIQHQQQQQQQQQQQ 259
Query: 169 QQ 170
QQ
Sbjct: 260 QQ 261
>UNIPROTKB|Q60443 [details] [associations]
symbol:Q60443 "Kinesin-like protein KIFC1" species:10029
"Cricetulus griseus" [GO:0030496 "midbody" evidence=IDA]
InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129 GO:GO:0005524
GO:GO:0005634 GO:GO:0005875 GO:GO:0051301 GO:GO:0007067
GO:GO:0005819 GO:GO:0005815 GO:GO:0030496 GO:GO:0005874
GO:GO:0005769 GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
HSSP:Q02224 EMBL:X83576 PIR:A57281 ProteinModelPortal:Q60443
SMR:Q60443 HOVERGEN:HBG001080 Uniprot:Q60443
Length = 622
Score = 112 (44.5 bits), Expect = 0.00075, P = 0.00075
Identities = 36/134 (26%), Positives = 59/134 (44%)
Query: 50 SFGDSDGPKEVEAGSRKRLRSESCCVSGSKACREKLRRDRLNERFLELGSMLEPGRPPKT 109
S GP + G +K C GS +KL ++ + PG+ P
Sbjct: 33 SLSQPQGPTAAQKGPKKT-GPRGCTAVGSVLKNQKLAPTAPAQKPVRK----RPGKRPDW 87
Query: 110 DKATILSDAVQMMEQLRTEAQKLKQSNENLQEKIKE-------LKAEKNELRDEKQRLKA 162
D L D + ++ R + QKL Q N+ LQE++KE L E+N L E ++
Sbjct: 88 DLKGQLCDLTEELKCYREKTQKLDQENQGLQEQLKEAQEQAAALGTERNTLEGELASVRT 147
Query: 163 DKEKLEQQVKAMSA 176
E+ +Q+++A+ A
Sbjct: 148 QAEQCQQKLEALCA 161
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 108 (43.1 bits), Expect = 0.00077, P = 0.00077
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 48 DCSFGDSDGPKEVEAGSRKRLRSESCCVSGSKA--CREKLRRDRLNERFLELGSMLEPGR 105
D G S P E AG+R R S S ++ EK RR ++NE+ L S++
Sbjct: 76 DSEAGGSSEP-EAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSN 134
Query: 106 PPKTDKATILSDAVQMMEQLRTEAQKLKQSN 136
KTDKA++L +A++ ++QL+ + Q L N
Sbjct: 135 --KTDKASMLDEAIEYLKQLQLQVQMLSMRN 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 235 205 0.00096 111 3 11 23 0.41 33
31 0.47 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 597 (63 KB)
Total size of DFA: 167 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 36.72u 0.11s 36.83t Elapsed: 00:00:01
Total cpu time: 36.72u 0.11s 36.83t Elapsed: 00:00:01
Start: Fri May 10 23:43:07 2013 End: Fri May 10 23:43:08 2013