BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026656
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP P IGN+ Q D + + S+ YGP+ ++ LG P +V+ +
Sbjct: 4 KTSSKGKLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGYE 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNA-YWREIRKICVVHLFN 138
+E L +F R ++ +KVS GL +AF+ NA W+E+R+ ++ L N
Sbjct: 64 AVKEALVDLGEEFAGRGSVPILEKVS-KGLGIAFS--NAKTWKEMRRFSLMTLRN 115
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LP IGN+ Q D + F SK YGP+ ++ G PI+V +
Sbjct: 4 KTSSKGKLPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYE 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFN 138
+E L + +F R Q+++ GL + + W+EIR+ + L N
Sbjct: 64 AVKEALIDNGEEFSGRGNSPISQRIT-KGLGI-ISSNGKRWKEIRRFSLTTLRN 115
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
K S PPGP P IGN + F RL+++YG + +RLGS PI+V++ +
Sbjct: 3 KKTSSKGKPPGPFAWPLIGNAAAVGQA-AHLSFARLARRYGDVFQIRLGSCPIVVLNGER 61
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRK 130
+ L F RP+ S + VS G +AF Y+ +W+ R+
Sbjct: 62 AIHQALVQQGSAFADRPSFASFRVVS-GGRSMAFGHYSEHWKVQRR 106
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LP IGNL Q + N F RL++++GP+ +L +GS ++V+ K
Sbjct: 4 KTSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYK 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFN 138
+E L + +F R L + G+ P W++IR+ + L N
Sbjct: 64 AVKEALLDYKDEFSGRGDLPAFHAHRDRGIIFNNGP---TWKDIRRFSLTTLRN 114
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 33 PPGPRGLPFIGNLHQFD-YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLK 91
P LP +G+L + + N F++L K+YGP+ S+R+G+ ++V ++A+EVL
Sbjct: 10 PKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLI 69
Query: 92 THDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVV 134
F RP + + S N +AFA A+W+ R++ +
Sbjct: 70 KKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMA 112
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 28 KSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAE 87
K + PPGP G P IG++ NP R+S+QYG ++ +R+GS P++V+S
Sbjct: 8 KGLKNPPGPWGWPLIGHMLTLG-KNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLDTIR 66
Query: 88 EVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNA-YWREIRKIC 132
+ L F RP L + +S NG ++F+P + W R++
Sbjct: 67 QALVRQGDDFKGRPDLYTFTLIS-NGQSMSFSPDSGPVWAARRRLA 111
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LP +GNL Q D F RL ++YG + ++ LGS P++V+
Sbjct: 4 KTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L F R + + + G V FA WR +R+ + +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATM 113
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 157 GWVDNITGMIRRLERNFKEFDAFHQELIEEH---LDPARIKTDQEDIVDVLLQIWKQRGS 213
G++ G R++ RN +E + F + +E+H LDP+ + D +DV L ++ S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPS----NPRDFIDVYLLRMEKDKS 258
Query: 214 KVDITWDHIKAVLMV 228
+ H +L V
Sbjct: 259 DPSSEFHHQNLILTV 273
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LP +GNL Q D F RL ++YG + ++ LGS P++V+
Sbjct: 4 KTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L F R + + + G V FA WR +R+ + +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATM 113
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 157 GWVDNITGMIRRLERNFKEFDAFHQELIEEH---LDPARIKTDQEDIVDVLLQIWKQRGS 213
G++ G R++ RN +E + F + +E+H LDP ++ D +DV L ++ S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDP----SNPRDFIDVYLLRMEKDKS 258
Query: 214 KVDITWDHIKAVLMV 228
+ H +L V
Sbjct: 259 DPSSEFHHQNLILTV 273
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LP +GNL Q D F RL ++YG + ++ LGS P++V+
Sbjct: 4 KTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L F R + + + G V FA WR +R+ + +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATM 113
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 157 GWVDNITGMIRRLERNFKEFDAFHQELIEEH---LDPARIKTDQEDIVDVLLQIWKQRGS 213
G++ G R++ RN +E + F + +E+H LDP ++ D +DV L ++ S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDP----SNPRDFIDVYLLRMEKDKS 258
Query: 214 KVDITWDHIKAVLMV 228
+ H +L V
Sbjct: 259 DPSSEFHHQNLILTV 273
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LP +GNL Q D F RL ++YG + ++ LGS P++V+
Sbjct: 4 KTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L F R + + + G V FA WR +R+ + +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATM 113
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 157 GWVDNITGMIRRLERNFKEFDAFHQELIEEH---LDPARIKTDQEDIVDVLLQIWKQRGS 213
G++ + G R++ RN +E + F + +E+H LDP ++ D +DV L ++ S
Sbjct: 203 GFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDP----SNPRDFIDVYLLRMEKDKS 258
Query: 214 KVDITWDHIKAVLMV 228
+ H +L V
Sbjct: 259 DPSSEFHHQNLILTV 273
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LP +GNL Q D F RL ++YG + ++ LGS P++V+
Sbjct: 4 KTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L F R + + + G V FA WR +R+ + +
Sbjct: 64 AIREALVDQAEAFSGRGKIAVVDPI-FQGYGVIFA-NGERWRALRRFSLATM 113
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 157 GWVDNITGMIRRLERNFKEFDAFHQELIEEH---LDPARIKTDQEDIVDVLLQIWKQRGS 213
G++ G R++ RN +E + F + +E+H LDP ++ D +DV L ++ S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDP----SNPRDFIDVYLLRMEKDKS 258
Query: 214 KVDITWDHIKAVLMV 228
+ H +L V
Sbjct: 259 DPSSEFHHQNLILTV 273
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 32 LPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLK 91
LPPGP LP IGN+ Q + LSK YGP+ +L G PI+V+ + +E L
Sbjct: 12 LPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 71
Query: 92 THDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFN 138
+F R + + + G + F+ W+EIR+ ++ L N
Sbjct: 72 DLGEEFSGR-GIFPLAERANRGFGIVFS-NGKKWKEIRRFSLMTLRN 116
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
K S PPGP LP IGN+ Q + LSK YGP+ +L G PI+V+ +
Sbjct: 3 KKTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYE 62
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFN 138
+E L +F R + + + G + F+ W+EIR+ ++ L N
Sbjct: 63 AVKEALIDLGEEFSGR-GIFPLAERANRGFGIVFS-NGKKWKEIRRFSLMTLRN 114
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 32 LPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLK 91
LPPGP LP IGN+ Q D + LSK YGP+ +L G ++V+ ++ +E L
Sbjct: 12 LPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGYEVVKEALI 71
Query: 92 THDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFN 138
+F R ++ + G + F+ W+EIR+ ++ L N
Sbjct: 72 DLGEEFSGRGHFPLAERAN-RGFGIVFS-NGKRWKEIRRFSLMTLRN 116
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LPFIGN Q + N ++S++YGP+ ++ LG ++V+
Sbjct: 4 KTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVS---YNGLDVAFAPYNAYWREIRKICVVHL 136
+E L +F R +Q + G VAF+ +++R+ + L
Sbjct: 64 AVKEALVDQAEEFSGR----GEQATFDWLFKGYGVAFS-NGERAKQLRRFSIATL 113
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LPFIGN Q + N ++S++YGP+ ++ LG ++V+
Sbjct: 4 KTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L +F R + V + G V F+ +++R+ + L
Sbjct: 64 AVREALVDQAEEFSGRGEQATFDWV-FKGYGVVFS-NGERAKQLRRFSIATL 113
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LPFIGN Q + N ++S++YGP+ ++ LG ++V+
Sbjct: 4 KTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L +F R + V + G V F+ +++R+ + L
Sbjct: 64 AVREALVDQAEEFSGRGEQATFDWV-FKGYGVVFS-NGERAKQLRRFSIATL 113
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LPFIGN Q + N ++S++YGP+ ++ LG ++V+
Sbjct: 4 KTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L +F R + V + G V F+ +++R+ + L
Sbjct: 64 AVREALVDQAEEFSGRGEQATFDWV-FKGYGVVFS-NGERAKQLRRFSIATL 113
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LPFIGN Q + N ++S++YGP+ ++ LG ++V+
Sbjct: 4 KTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHD 63
Query: 85 MAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
E L +F R + V + G V F+ +++R+ + L
Sbjct: 64 AVREALVDQAEEFSGRGEQATFDWV-FKGYGVVFS-NGERAKQLRRFSIATL 113
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAK 84
KT LPPGP LPFIGN Q + N ++S++YGP+ ++ LG ++V+
Sbjct: 4 KTSSKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHD 63
Query: 85 MAEEVLKTHDLQFCSR 100
E L +F R
Sbjct: 64 AVREALVDQAEEFSGR 79
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 23 RYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSS 82
R + K + PP P G P +G++ NP R+S++YG ++ +R+GS P+LV+S
Sbjct: 8 RPRVPKGLKSPPEPWGWPLLGHVLTLG-KNPHLALSRMSQRYGDVLQIRIGSTPVLVLSR 66
Query: 83 AKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFA 119
+ L F RP L + ++ +G + F+
Sbjct: 67 LDTIRQALVRQGDDFKGRPDLYTSTLIT-DGQSLTFS 102
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 43 GNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA 102
G LH + P + L+++ GP+ LRLG ++V++S + EE + + F RP
Sbjct: 36 GFLHLLQPNLPIHLL-SLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQ 94
Query: 103 LLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIREDYFPSIGWVDNI 162
+ S + VS D++ Y+ W+ +K+ L R S P WVD +
Sbjct: 95 IPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR-SSMEP----------WVDQL 143
Query: 163 T 163
T
Sbjct: 144 T 144
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 49 DYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQK 108
D+ N F +L +++G + SL+L P++V++ E L TH RP + Q
Sbjct: 28 DFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI 87
Query: 109 VSYN--GLDVAFAPYNAYWREIRKICVVHLFN 138
+ + V A Y WRE R+ V L N
Sbjct: 88 LGFGPRSQGVFLARYGPAWREQRRFSVSTLRN 119
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 2/92 (2%)
Query: 49 DYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQK 108
D+ N F +L +++G + SL+L P++V++ E L TH RP + Q
Sbjct: 28 DFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQI 87
Query: 109 VSYN--GLDVAFAPYNAYWREIRKICVVHLFN 138
+ + V A Y WRE R+ V L N
Sbjct: 88 LGFGPRSQGVFLARYGPAWREQRRFSVSTLRN 119
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 27 IKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMA 86
+ S+ +PPG GLP++G ++ N ++ + +Q+GP+ RL ++ +S A +A
Sbjct: 8 LNSLPIPPGDFGLPWLG--ETLNFLNDGDFGKKRQQQFGPIFKTRLFGKNVIFISGA-LA 64
Query: 87 EEVLKTHD 94
L T +
Sbjct: 65 NRFLFTKE 72
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 44 NLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPAL 103
NL Q D F R ++YG + ++ LG P++++ + E L F R
Sbjct: 23 NLLQMDRRGLLKSFLRFREKYGDVFTVHLGPRPVVMLCGVEAIREALVDKAEAFSGR-GK 81
Query: 104 LSQQKVSYNGLDVAFAPYNAYWREIRKICVVHL 136
++ + G V FA N W+ +R+ V +
Sbjct: 82 IAMVDPFFRGYGVIFANGNR-WKVLRRFSVTTM 113
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 44 NLHQFDYSN--PQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRP 101
N++ S+ P Y + S+ YG + SL LG + +V++ + +E L F RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 102 ALLSQQKVSYNGLDVAFAPYNAYWREIRKICV 133
L K++ G + + Y W + R++ V
Sbjct: 85 CLPLFMKMTKMG-GLLNSRYGRGWVDHRRLAV 115
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 44 NLHQFDYSN--PQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRP 101
N++ S+ P Y + S+ YG + SL LG + +V++ + +E L F RP
Sbjct: 25 NIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRP 84
Query: 102 ALLSQQKVSYNGLDVAFAPYNAYWREIRKICV 133
L K++ G + + Y W + R++ V
Sbjct: 85 CLPLFMKMTKMG-GLLNSRYGRGWVDHRRLAV 115
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To
An Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To
An Inhibitor Ritonavir
Length = 485
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 34 PGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVL 90
PGP LPF+GN+ + + + K+YG + G P+L ++ M + VL
Sbjct: 17 PGPTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVL 72
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 34 PGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVL 90
PGP LPF+GN+ + + + K+YG + G P+L ++ M + VL
Sbjct: 18 PGPTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVL 73
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human
Cytochrome P450 3a4 And Desthiazolylmethyloxycarbonyl
Ritonavir
Length = 487
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 34 PGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVL 90
PGP LPF+GN+ + + + K+YG + G P+L ++ M + VL
Sbjct: 19 PGPTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVL 74
>pdb|3T5T|A Chain A, Vall From Streptomyces Hygroscopicus In Apo Form
pdb|3T5T|B Chain B, Vall From Streptomyces Hygroscopicus In Apo Form
Length = 496
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 78 LVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNA--YWREIRK 130
++ SSA+ A+ V HD Q PALL +Q+ L P+ + YWR + K
Sbjct: 141 ILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 195
>pdb|4F96|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F96|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
pdb|4F97|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F97|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Validoxylamine A 7'-Phosphate
pdb|4F9F|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|C Chain C, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|D Chain D, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|E Chain E, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|4F9F|F Chain F, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp And Trehalose
pdb|3VDM|A Chain A, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDM|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase
Which Catalyzes Non-Glycosidic C-N Coupling In
Validamycin A Biosynthesis
pdb|3VDN|B Chain B, Crystal Structure Of Vlde, The Pseudo-Glycosyltransferase,
In Complex With Gdp
Length = 497
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 78 LVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNA--YWREIRK 130
++ SSA+ A+ V HD Q PALL +Q+ L P+ + YWR + K
Sbjct: 142 ILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 196
>pdb|3T7D|A Chain A, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
pdb|3T7D|B Chain B, Vall From Streptomyces Hygroscopicus In Complex With
Trehalose
Length = 497
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 78 LVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNA--YWREIRK 130
++ SSA+ A+ V HD Q PALL +Q+ L P+ + YWR + K
Sbjct: 142 ILKSSAQSADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPSADYWRILPK 196
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 34 PGPRGLPFIGNLHQF----DYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEV 89
PGP P +G+L + + K+YG + ++LGS + + S + E +
Sbjct: 27 PGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEAL 86
Query: 90 LKTH 93
+T
Sbjct: 87 YRTE 90
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,682,738
Number of Sequences: 62578
Number of extensions: 260024
Number of successful extensions: 752
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 709
Number of HSP's gapped (non-prelim): 40
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.9 bits)