Query 026656
Match_columns 235
No_of_seqs 155 out of 1558
Neff 11.3
Searched_HMMs 29240
Date Mon Mar 25 18:53:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026656.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026656hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 9.3E-28 3.2E-32 194.9 19.1 204 27-234 4-286 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 5.2E-28 1.8E-32 196.9 15.8 204 26-234 4-292 (507)
3 3ld6_A Lanosterol 14-alpha dem 100.0 5.6E-28 1.9E-32 194.7 13.6 192 30-234 10-265 (461)
4 3qz1_A Steroid 21-hydroxylase; 100.0 3.3E-28 1.1E-32 197.6 10.4 203 22-234 20-292 (496)
5 3tbg_A Cytochrome P450 2D6; mo 100.0 4E-27 1.4E-31 190.4 16.6 204 27-234 6-285 (479)
6 3s79_A Cytochrome P450 19A1; o 99.9 4.5E-27 1.5E-31 191.3 12.0 198 28-234 42-308 (503)
7 3gw9_A Sterol 14alpha-demethyl 99.9 7.9E-27 2.7E-31 187.3 12.6 197 30-234 2-266 (450)
8 2hi4_A Cytochrome P450 1A2; CY 99.9 3.2E-26 1.1E-30 185.9 15.8 204 25-234 10-295 (495)
9 3czh_A Cytochrome P450 2R1; vi 99.9 6E-26 2.1E-30 183.7 17.0 202 28-234 9-286 (481)
10 3e6i_A CYPIIE1, P450-J, cytoch 99.9 5.9E-26 2E-30 183.5 16.6 202 25-234 4-280 (476)
11 3i3k_A Lanosterol 14-alpha dem 99.9 7.2E-26 2.5E-30 182.3 13.6 200 26-234 6-265 (461)
12 2fdv_A Cytochrome P450 2A6; CY 99.9 3.4E-25 1.2E-29 179.1 17.2 201 28-234 7-281 (476)
13 3nxu_A Cytochrome P450 3A4; al 99.9 9.4E-27 3.2E-31 188.6 8.0 197 30-234 13-285 (485)
14 1po5_A Cytochrome P450 2B4; ox 99.9 2.7E-25 9.2E-30 179.7 13.7 203 28-234 7-281 (476)
15 1r9o_A Cytochrome P450 2C9; mo 99.9 1.9E-25 6.6E-30 180.6 12.8 202 27-234 7-282 (477)
16 3k9v_A 1,25-dihydroxyvitamin D 99.9 6.8E-25 2.3E-29 177.5 14.6 201 23-234 16-296 (482)
17 2ij2_A Cytochrome P450 BM3; mo 99.9 1.9E-24 6.6E-29 174.4 16.9 197 30-234 2-266 (470)
18 2ve3_A Putative cytochrome P45 99.9 1.7E-24 5.8E-29 173.5 13.9 201 23-234 4-256 (444)
19 2cib_A Cytochrome P450 51; hem 99.9 5.5E-24 1.9E-28 171.1 14.3 196 31-234 4-258 (455)
20 3dbg_A Putative cytochrome P45 99.9 5.6E-25 1.9E-29 177.4 6.6 192 30-234 22-276 (467)
21 2cd8_A Cytochrome P450 monooxy 99.9 2.6E-23 8.9E-28 166.2 9.7 194 28-234 23-265 (436)
22 3v8d_A Cholesterol 7-alpha-mon 99.9 1.2E-23 4.2E-28 170.6 6.8 195 25-234 7-270 (491)
23 3n9y_A Cholesterol SIDE-chain 99.9 2E-22 7E-27 163.2 10.9 122 25-150 3-132 (487)
24 1jfb_A Nitric-oxide reductase 99.9 4.4E-21 1.5E-25 151.9 11.9 188 32-234 2-242 (404)
25 1ued_A P450 OXYC, P450 monooxy 99.8 2.3E-20 7.9E-25 147.9 11.0 185 29-234 8-247 (406)
26 3mdm_A Cholesterol 24-hydroxyl 99.8 1.8E-19 6.1E-24 144.8 15.2 177 50-234 9-256 (456)
27 2zbx_A Cytochrome P450-SU1; be 99.8 5.4E-20 1.9E-24 146.0 11.4 190 30-234 4-246 (412)
28 1cpt_A Cytochrome P450-TERP; o 99.8 1.9E-19 6.6E-24 143.6 12.1 190 28-234 3-269 (428)
29 1izo_A P450bsbeta, cytochrome 99.8 2.1E-19 7.2E-24 142.9 11.7 186 39-234 8-244 (417)
30 3awm_A Fatty acid alpha-hydrox 99.8 2E-19 6.9E-24 142.9 11.1 189 33-234 4-243 (415)
31 3ivy_A Cytochrome P450 CYP125; 99.8 2.1E-19 7.1E-24 143.5 10.9 191 31-234 18-270 (433)
32 2jjn_A Cytochrome P450 113A1; 99.8 4.2E-19 1.4E-23 140.9 12.1 187 21-234 9-243 (411)
33 3lxh_A Cytochrome P450; heme, 99.8 7E-19 2.4E-23 140.0 13.4 173 50-234 37-258 (421)
34 3dax_A Cytochrome P450 7A1; ch 99.8 8.5E-20 2.9E-24 148.0 6.5 116 27-147 9-126 (491)
35 3ejb_B Biotin biosynthesis cyt 99.8 4E-18 1.4E-22 135.0 15.5 170 50-234 12-236 (404)
36 3oo3_A OXY protein; cytochrome 99.8 5.4E-19 1.9E-23 139.1 9.5 171 50-234 11-228 (384)
37 3b98_A Prostaglandin I2 syntha 99.8 2.5E-19 8.5E-24 144.7 7.3 116 26-150 13-130 (475)
38 4fb2_A P450CIN; heme, monooxyg 99.8 8.4E-19 2.9E-23 138.6 10.0 173 50-234 18-234 (398)
39 3abb_A CYP105D6, cytochrome P4 99.8 5.5E-19 1.9E-23 140.1 8.5 175 46-234 20-245 (408)
40 3tyw_A Putative cytochrome P45 99.8 1.6E-18 5.4E-23 137.8 10.8 172 50-234 28-251 (417)
41 1s1f_A Putative cytochrome P45 99.8 5.6E-19 1.9E-23 139.9 8.1 185 31-233 8-243 (406)
42 2z36_A MOXA, cytochrome P450 t 99.8 8.3E-18 2.8E-22 133.5 13.9 188 28-234 4-247 (413)
43 3tkt_A Cytochrome P450; aromat 99.8 2E-18 6.9E-23 138.5 9.8 170 53-234 47-291 (450)
44 3b6h_A Prostacyclin synthase; 99.8 1.5E-18 5.2E-23 140.9 8.6 112 27-146 14-127 (498)
45 3nc3_A Cytochrome P450 CYPX; c 99.8 8.9E-19 3E-23 140.2 7.0 170 50-234 52-271 (441)
46 3r9b_A Cytochrome P450 164A2; 99.8 1.9E-17 6.5E-22 131.7 14.4 170 50-234 28-258 (418)
47 3aba_A Cytochrome P450; oxidor 99.8 3.7E-18 1.3E-22 135.1 10.2 172 50-234 18-239 (403)
48 2zwu_A Camphor 5-monooxygenase 99.8 6.3E-18 2.2E-22 134.2 11.2 195 25-234 5-251 (415)
49 3a4g_A Vitamin D hydroxylase; 99.7 5.5E-18 1.9E-22 134.4 10.7 173 50-234 19-238 (411)
50 3oft_A Cytochrome P450, CYP101 99.7 1.2E-18 4.1E-23 137.6 6.6 172 50-234 23-236 (396)
51 2z3t_A Cytochrome P450; monoxy 99.7 2.7E-17 9.1E-22 131.0 14.4 170 50-234 19-256 (425)
52 1n97_A CYP175A1; electron tran 99.7 6.5E-19 2.2E-23 138.8 5.0 109 34-150 2-111 (389)
53 1odo_A Putative cytochrome P45 99.7 5.6E-18 1.9E-22 134.3 9.8 175 50-234 14-244 (408)
54 2y5n_A MYCG, P-450-like protei 99.7 9.1E-18 3.1E-22 133.4 10.3 172 50-234 36-256 (417)
55 1z8o_A 6-deoxyerythronolide B 99.7 1.9E-17 6.4E-22 131.1 12.0 172 50-234 13-243 (404)
56 1gwi_A CYP154C1, cytochrome P4 99.7 3.5E-17 1.2E-21 129.8 12.2 172 50-234 16-244 (411)
57 2dkk_A Cytochrome P450; CYP158 99.7 1.2E-17 4.1E-22 132.5 9.4 170 50-233 26-246 (411)
58 1q5d_A P450 epoxidase; cytochr 99.7 6.3E-17 2.2E-21 128.7 12.5 170 50-234 25-256 (419)
59 2wm5_A CYP124, putative cytoch 99.7 6.5E-17 2.2E-21 129.1 11.9 172 51-234 44-276 (435)
60 2xkr_A CYP142, putative cytoch 99.7 9.2E-17 3.1E-21 126.9 12.6 167 50-234 17-232 (398)
61 3rwl_A Cytochrome P450 alkane 99.7 2.4E-16 8E-21 125.6 13.8 173 50-234 37-267 (426)
62 3buj_A CALO2; heme, iron, meta 99.7 3.1E-16 1.1E-20 123.9 12.3 167 51-234 13-235 (397)
63 3mgx_A Putative P450 monooxyge 99.7 3.4E-16 1.2E-20 124.2 12.3 169 50-234 36-256 (415)
64 1lfk_A OXYB, P450 monooxygenas 99.7 2.9E-16 9.9E-21 124.1 11.0 164 57-234 19-238 (398)
65 2xbk_A PIMD protein; epoxidati 99.7 5.2E-16 1.8E-20 122.8 11.9 166 50-234 25-243 (404)
66 2uuq_A CYP130, cytochrome P450 99.7 9.1E-17 3.1E-21 127.5 7.5 173 50-234 24-252 (414)
67 3p3o_A Cytochrome P450; monoox 99.6 7.9E-16 2.7E-20 122.2 10.1 169 50-234 32-255 (416)
68 2wiy_A XPLA-heme, cytochrome P 99.6 9.6E-15 3.3E-19 115.2 11.5 167 51-234 20-235 (394)
69 4dxy_A Cytochrome P450, CYP101 99.6 1.6E-14 5.4E-19 114.6 12.4 173 50-234 36-257 (417)
70 3dsk_A Cytochrome P450 74A, ch 99.6 8E-16 2.7E-20 124.8 5.0 122 26-150 23-160 (495)
71 4dnj_A Putative cytochrome P45 99.6 2.3E-15 7.7E-20 119.4 5.8 108 37-150 18-131 (412)
72 1n40_A P450 MT2, cytochrome P4 99.5 9.9E-15 3.4E-19 115.2 6.6 165 50-234 15-235 (396)
73 3b4x_A 367AA long hypothetical 99.5 8.2E-14 2.8E-18 108.9 9.1 158 53-234 1-212 (367)
74 3dan_A Cytochrome P450 74A2; A 99.5 9.7E-14 3.3E-18 111.9 9.6 122 26-150 4-142 (473)
75 1io7_A Cytochrome P450 CYP119; 99.5 4E-13 1.4E-17 105.0 10.5 156 53-234 1-211 (368)
76 2rfb_A Cytochrome P450; heme, 99.4 4.7E-13 1.6E-17 103.6 5.6 78 62-150 2-79 (343)
77 2yjn_B Erycii, DTDP-4-keto-6-d 96.7 0.00042 1.4E-08 54.1 1.1 62 32-101 35-102 (381)
78 1s79_A Lupus LA protein; RRM, 82.0 6.5 0.00022 23.9 6.8 50 41-93 15-72 (103)
79 2diu_A KIAA0430 protein; struc 81.1 3.7 0.00013 24.8 4.7 52 40-92 12-65 (96)
80 2wbr_A GW182, gawky, LD47780P; 78.2 8.5 0.00029 22.9 6.2 50 39-91 9-61 (89)
81 3d2w_A TAR DNA-binding protein 77.7 8.2 0.00028 22.6 5.7 52 35-89 9-64 (89)
82 2krb_A Eukaryotic translation 77.0 8 0.00027 22.0 7.4 51 41-92 5-66 (81)
83 1iqt_A AUF1, heterogeneous nuc 74.3 7.9 0.00027 21.5 4.8 41 53-93 12-61 (75)
84 3lqv_A PRE-mRNA branch site pr 72.9 14 0.00047 22.7 8.3 57 32-91 3-65 (115)
85 2nlw_A Eukaryotic translation 69.0 16 0.00056 22.0 7.3 53 39-92 17-80 (105)
86 3beg_B Splicing factor, argini 67.1 19 0.00066 22.1 6.1 50 40-92 19-70 (115)
87 1sjq_A Polypyrimidine tract-bi 65.6 21 0.0007 21.9 6.9 53 36-91 15-70 (105)
88 2ad9_A Polypyrimidine tract-bi 63.0 25 0.00087 22.0 6.2 50 39-91 33-85 (119)
89 2a3j_A U1 small nuclear ribonu 61.1 29 0.00097 22.0 6.1 53 40-92 32-91 (127)
90 2jvr_A Nucleolar protein 3; RN 60.1 27 0.00093 21.5 6.1 51 39-92 30-86 (111)
91 1sjr_A Polypyrimidine tract-bi 60.0 36 0.0012 22.8 6.9 48 42-92 51-103 (164)
92 3s8s_A Histone-lysine N-methyl 59.3 28 0.00094 21.3 6.0 50 40-92 9-67 (110)
93 1nu4_A U1A RNA binding domain; 59.1 24 0.00083 20.6 5.1 54 39-92 10-70 (97)
94 3s6e_A RNA-binding protein 39; 59.0 25 0.00085 21.8 5.1 61 32-92 2-74 (114)
95 1x4c_A Splicing factor, argini 57.1 29 0.001 20.9 7.2 50 40-92 18-69 (108)
96 1x4d_A Matrin 3; structural ge 54.4 33 0.0011 20.7 6.3 56 35-92 13-71 (102)
97 4f25_A Polyadenylate-binding p 54.4 35 0.0012 20.9 5.9 50 40-92 8-64 (115)
98 2mss_A Protein (musashi1); RNA 54.4 25 0.00086 19.3 4.6 40 53-92 12-60 (75)
99 4fxv_A ELAV-like protein 1; RN 54.1 32 0.0011 20.4 5.9 50 40-92 22-80 (99)
100 1x4e_A RNA binding motif, sing 53.7 28 0.00097 19.7 5.1 50 39-91 7-65 (85)
101 2d9o_A DNAJ (HSP40) homolog, s 53.6 34 0.0012 20.6 6.5 40 53-92 30-73 (100)
102 1whx_A Hypothetical protein ri 53.5 35 0.0012 20.7 6.5 49 41-92 14-65 (111)
103 3s7r_A Heterogeneous nuclear r 51.0 32 0.0011 19.5 4.9 52 39-93 13-73 (87)
104 2cqc_A Arginine/serine-rich sp 49.3 36 0.0012 19.6 6.8 54 36-92 14-76 (95)
105 2pe8_A Splicing factor 45; RRM 49.1 42 0.0014 20.3 5.4 59 34-92 5-75 (105)
106 2kxn_B Transformer-2 protein h 49.0 47 0.0016 20.9 7.8 51 39-92 48-107 (129)
107 2voo_A Lupus LA protein; RNA-b 46.4 38 0.0013 23.2 4.9 50 41-93 113-170 (193)
108 3zzy_A Polypyrimidine tract-bi 44.2 52 0.0018 21.0 4.9 49 41-92 32-85 (130)
109 2cq1_A PTB-like protein L; RRM 43.8 51 0.0017 19.8 6.1 50 39-91 17-69 (101)
110 1whv_A Poly(A)-specific ribonu 43.7 32 0.0011 20.8 3.5 47 54-100 29-78 (100)
111 4f02_A Polyadenylate-binding p 43.2 68 0.0023 22.1 6.0 54 36-92 14-76 (213)
112 2dgx_A KIAA0430 protein; RRM d 41.0 53 0.0018 19.1 6.1 53 40-92 12-71 (96)
113 1x4f_A Matrin 3; structural ge 40.9 44 0.0015 20.6 4.1 54 36-91 24-80 (112)
114 3bs9_A Nucleolysin TIA-1 isofo 40.2 50 0.0017 18.6 5.7 50 40-92 9-67 (87)
115 3ns6_A Eukaryotic translation 40.2 56 0.0019 19.2 5.9 54 39-92 8-73 (100)
116 3v4m_A Splicing factor U2AF 65 40.0 61 0.0021 19.5 6.0 39 54-92 29-78 (105)
117 2bz2_A Negative elongation fac 39.7 61 0.0021 20.1 4.8 48 40-92 42-92 (121)
118 2d9p_A Polyadenylate-binding p 39.3 58 0.002 19.1 6.1 54 36-92 14-74 (103)
119 2jwn_A Embryonic polyadenylate 39.2 63 0.0021 19.8 4.8 48 41-91 40-96 (124)
120 2dit_A HIV TAT specific factor 39.1 63 0.0022 19.5 5.7 59 34-92 12-83 (112)
121 1wf0_A TDP-43, TAR DNA-binding 38.6 39 0.0013 19.3 3.5 47 41-90 9-59 (88)
122 1l3k_A Heterogeneous nuclear r 38.5 75 0.0026 21.2 5.5 54 39-95 15-77 (196)
123 3tyt_A Heterogeneous nuclear r 37.6 98 0.0034 21.3 6.7 51 39-91 6-60 (205)
124 2jvo_A Nucleolar protein 3; nu 37.5 67 0.0023 19.3 5.6 49 41-92 35-84 (108)
125 1ghh_A DINI, DNA-damage-induci 37.4 61 0.0021 18.8 4.6 38 54-91 23-68 (81)
126 2la6_A RNA-binding protein FUS 37.3 62 0.0021 18.9 6.9 50 39-91 15-81 (99)
127 1wg5_A Heterogeneous nuclear r 37.2 65 0.0022 19.1 6.6 56 40-98 18-82 (104)
128 2dgv_A HnRNP M, heterogeneous 37.1 59 0.002 18.5 6.8 50 40-92 11-67 (92)
129 2dhg_A TRNA selenocysteine ass 37.1 64 0.0022 19.0 7.3 55 35-92 7-70 (104)
130 3ctr_A Poly(A)-specific ribonu 37.0 31 0.0011 20.9 2.8 49 54-102 19-70 (101)
131 1x5p_A Negative elongation fac 36.9 62 0.0021 18.8 7.1 49 39-92 17-68 (97)
132 2dnz_A Probable RNA-binding pr 36.7 61 0.0021 18.6 7.8 51 39-92 7-66 (95)
133 3pgw_S U1-70K; protein-RNA com 36.6 1.5E+02 0.005 23.5 7.4 51 39-92 104-163 (437)
134 3ex7_B RNA-binding protein 8A; 36.5 74 0.0025 19.6 7.1 56 40-98 25-90 (126)
135 3mdf_A Peptidyl-prolyl CIS-tra 36.2 58 0.002 18.2 7.1 51 39-92 9-68 (85)
136 1wex_A Hypothetical protein (r 35.9 72 0.0024 19.2 6.8 50 39-91 17-69 (104)
137 2cq3_A RNA-binding protein 9; 35.9 67 0.0023 18.9 7.4 51 39-92 17-74 (103)
138 2x1f_A MRNA 3'-END-processing 35.9 65 0.0022 18.6 6.6 49 41-92 6-63 (96)
139 3r27_A HnRNP L, heterogeneous 35.8 72 0.0025 19.2 7.3 52 38-92 22-76 (100)
140 2jrs_A RNA-binding protein 39; 35.4 73 0.0025 19.1 6.3 49 40-91 29-86 (108)
141 2ywk_A Putative RNA-binding pr 35.1 65 0.0022 18.5 4.8 49 40-91 19-75 (95)
142 3ue2_A Poly(U)-binding-splicin 34.8 82 0.0028 19.5 5.7 64 36-99 19-98 (118)
143 2e5h_A Zinc finger CCHC-type a 34.6 66 0.0023 18.4 7.1 51 39-92 18-77 (94)
144 3n9u_C Cleavage and polyadenyl 34.1 98 0.0033 20.2 6.0 40 53-92 68-118 (156)
145 2hvz_A Splicing factor, argini 34.1 72 0.0024 18.6 5.3 48 42-92 5-56 (101)
146 3tht_A Alkylated DNA repair pr 33.7 1.6E+02 0.0054 22.5 7.2 57 34-92 15-75 (345)
147 2cq4_A RNA binding motif prote 33.7 70 0.0024 19.3 4.3 50 41-93 29-87 (114)
148 1why_A Hypothetical protein ri 32.9 74 0.0025 18.4 7.3 51 39-92 19-72 (97)
149 2rs2_A Musashi-1, RNA-binding 32.9 81 0.0028 18.9 6.0 51 40-93 28-87 (109)
150 2xnq_A Nuclear polyadenylated 32.8 76 0.0026 18.5 7.1 50 41-92 26-76 (97)
151 1rk8_A CG8781-PA, CG8781-PA pr 32.7 1E+02 0.0036 20.1 6.4 50 40-92 75-133 (165)
152 2fy1_A RNA-binding motif prote 32.6 86 0.0029 19.1 4.8 50 40-92 10-67 (116)
153 1p27_B RNA-binding protein 8A; 32.4 79 0.0027 18.6 6.3 50 40-92 26-84 (106)
154 1oo0_B CG8781-PA, drosophila Y 32.3 82 0.0028 18.8 6.7 50 40-92 29-87 (110)
155 2dgu_A Heterogeneous nuclear r 32.3 79 0.0027 18.6 6.1 50 40-92 14-64 (103)
156 1whw_A Hypothetical protein ri 32.2 76 0.0026 18.4 5.9 50 40-92 11-69 (99)
157 2cjk_A Nuclear polyadenylated 32.0 89 0.003 20.1 4.9 50 41-93 91-149 (167)
158 2dgs_A DAZ-associated protein 31.8 78 0.0027 18.4 8.0 56 40-98 13-77 (99)
159 2dis_A Unnamed protein product 31.2 85 0.0029 18.6 6.3 50 40-92 11-71 (109)
160 1x4h_A RNA-binding protein 28; 30.9 87 0.003 18.6 8.0 51 39-92 17-76 (111)
161 2cq2_A Hypothetical protein LO 30.8 97 0.0033 19.2 7.4 54 36-92 24-82 (114)
162 2dnh_A Bruno-like 5, RNA bindi 30.6 85 0.0029 18.4 6.7 51 39-92 17-75 (105)
163 2cqb_A Peptidyl-prolyl CIS-tra 30.5 84 0.0029 18.3 5.4 51 39-92 14-73 (102)
164 2dnq_A RNA-binding protein 4B; 30.3 79 0.0027 18.0 7.0 50 40-92 11-61 (90)
165 3ucg_A Polyadenylate-binding p 30.0 78 0.0027 17.8 4.3 47 42-91 11-66 (89)
166 2do4_A Squamous cell carcinoma 29.7 86 0.0029 18.2 7.0 50 40-92 20-77 (100)
167 2cpf_A RNA binding motif prote 29.7 85 0.0029 18.1 6.5 50 40-92 8-69 (98)
168 4h62_V Mediator of RNA polymer 29.3 42 0.0015 14.5 1.8 14 219-232 14-27 (31)
169 1u6f_A Tcubp1, RNA-binding pro 28.9 1.1E+02 0.0037 19.2 5.5 49 41-92 46-103 (139)
170 2cqi_A Nucleolysin TIAR; RNA r 28.8 91 0.0031 18.2 5.9 50 39-91 17-73 (103)
171 2dnp_A RNA-binding protein 14; 28.8 84 0.0029 17.8 7.8 51 39-92 11-62 (90)
172 2dh8_A DAZ-associated protein 28.6 93 0.0032 18.3 5.8 52 40-94 19-79 (105)
173 2div_A TRNA selenocysteine ass 28.6 90 0.0031 18.1 6.4 54 36-92 8-71 (99)
174 2err_A Ataxin-2-binding protei 28.6 64 0.0022 19.4 3.4 49 41-92 33-88 (109)
175 2f3j_A RNA and export factor b 28.6 1.3E+02 0.0046 20.1 6.8 40 53-92 101-148 (177)
176 2cpi_A CCR4-NOT transcription 28.5 47 0.0016 20.1 2.8 51 39-92 17-82 (111)
177 1x4b_A Heterogeneous nuclear r 28.1 77 0.0026 19.1 3.8 49 41-92 31-88 (116)
178 1uaw_A Mouse-musashi-1; RNP-ty 28.0 74 0.0025 17.2 3.5 49 42-93 5-62 (77)
179 3ulh_A THO complex subunit 4; 27.8 98 0.0033 18.2 6.3 50 40-92 32-89 (107)
180 2adc_A Polypyrimidine tract-bi 27.2 1.6E+02 0.0054 20.4 7.9 50 40-91 37-90 (229)
181 2ku7_A MLL1 PHD3-CYP33 RRM chi 27.2 1.2E+02 0.004 18.9 7.6 49 41-92 67-124 (140)
182 3md1_A Nuclear and cytoplasmic 27.1 85 0.0029 17.3 4.9 48 42-92 6-62 (83)
183 1x4g_A Nucleolysin TIAR; struc 27.1 1E+02 0.0035 18.3 6.2 50 40-92 28-80 (109)
184 2cpj_A Non-POU domain-containi 27.0 97 0.0033 18.0 4.9 50 40-92 18-70 (99)
185 2dnm_A SRP46 splicing factor; 25.9 1E+02 0.0036 18.0 6.8 50 40-92 16-74 (103)
186 2khc_A Testis-specific RNP-typ 25.9 91 0.0031 18.8 3.8 49 41-92 44-101 (118)
187 1wi8_A EIF-4B, eukaryotic tran 25.8 1.1E+02 0.0036 18.0 6.0 49 39-91 17-75 (104)
188 2kvi_A Nuclear polyadenylated 25.5 1E+02 0.0035 17.8 6.1 51 40-92 13-64 (96)
189 2dgt_A RNA-binding protein 30; 25.4 1E+02 0.0034 17.6 6.6 50 40-92 13-63 (92)
190 2e5i_A Heterogeneous nuclear r 25.1 1.3E+02 0.0045 18.8 5.5 48 42-92 30-81 (124)
191 1x5u_A Splicing factor 3B subu 24.9 1.1E+02 0.0038 17.9 8.4 50 40-92 18-76 (105)
192 2do0_A HnRNP M, heterogeneous 24.8 1.2E+02 0.004 18.1 5.0 50 40-92 18-75 (114)
193 3fgx_A Rbstp2171; structural g 24.7 57 0.0019 20.3 2.5 16 57-72 10-25 (114)
194 3p5t_L Cleavage and polyadenyl 24.3 1.1E+02 0.0036 17.4 4.7 48 41-91 5-63 (90)
195 3md3_A Nuclear and cytoplasmic 24.3 1.4E+02 0.0049 18.9 5.4 47 42-91 5-59 (166)
196 1p1t_A Cleavage stimulation fa 23.8 1.2E+02 0.004 17.7 5.1 49 41-92 12-69 (104)
197 2dnr_A Synaptojanin-1; RRM dom 23.5 1.2E+02 0.0042 17.9 4.9 41 53-93 28-69 (91)
198 2hgn_A Heterogeneous nuclear r 23.4 1.5E+02 0.005 19.0 4.5 56 41-100 50-113 (139)
199 2cq0_A Eukaryotic translation 22.8 94 0.0032 18.2 3.4 50 40-92 18-76 (103)
200 1h2v_Z 20 kDa nuclear CAP bind 22.5 1.6E+02 0.0055 18.9 5.4 51 39-92 41-100 (156)
201 4a8x_A RNA-binding protein wit 22.5 1.1E+02 0.0038 17.0 5.9 49 41-92 8-66 (88)
202 2dgp_A Bruno-like 4, RNA bindi 22.0 1.3E+02 0.0044 17.6 6.9 50 40-92 16-74 (106)
203 1jmt_A Splicing factor U2AF 35 21.9 1.4E+02 0.0047 17.8 5.9 36 57-92 43-87 (104)
204 1wez_A HnRNP H', FTP-3, hetero 21.8 1.2E+02 0.0043 17.8 3.8 58 39-100 17-82 (102)
205 2ytc_A PRE-mRNA-splicing facto 21.6 1.1E+02 0.0039 16.9 7.7 50 40-92 15-67 (85)
206 1x5t_A Splicing factor 3B subu 21.6 1.2E+02 0.0042 17.3 4.7 49 40-91 8-66 (96)
207 2i2y_A Fusion protein consists 21.6 1.6E+02 0.0056 18.7 8.7 51 39-92 75-129 (150)
208 3pgw_A U1-A; protein-RNA compl 21.5 1.6E+02 0.0054 21.1 5.0 54 39-92 11-71 (282)
209 1b35_D CRPV, protein (cricket 21.4 45 0.0016 17.0 1.3 11 38-48 30-40 (57)
210 2cqd_A RNA-binding region cont 21.3 1.4E+02 0.0049 17.9 5.9 51 40-93 20-79 (116)
211 2qfj_A FBP-interacting repress 20.9 2E+02 0.0068 19.4 7.1 49 41-92 32-89 (216)
212 2cph_A RNA binding motif prote 20.7 1.4E+02 0.0047 17.5 8.7 50 40-92 18-77 (107)
213 2dha_A FLJ20171 protein; RRM d 20.6 1.6E+02 0.0056 18.3 5.1 51 40-93 26-88 (123)
214 1wf1_A RNA-binding protein RAL 20.4 1.5E+02 0.005 17.6 6.3 51 40-92 30-81 (110)
215 1x5o_A RNA binding motif, sing 20.4 1.5E+02 0.005 17.7 4.0 50 40-92 28-85 (114)
216 2cpy_A RNA-binding protein 12; 20.3 1.5E+02 0.0052 17.8 4.8 55 36-93 14-77 (114)
217 2kn4_A Immunoglobulin G-bindin 20.2 1.8E+02 0.0062 18.6 7.9 51 39-92 72-131 (158)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=99.96 E-value=9.3e-28 Score=194.91 Aligned_cols=204 Identities=23% Similarity=0.363 Sum_probs=151.8
Q ss_pred ccCCCCCCCCCCccccccccCCCC-CChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhH
Q 026656 27 IKSIALPPGPRGLPFIGNLHQFDY-SNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLS 105 (235)
Q Consensus 27 ~~~~~~~pgp~~~p~~G~~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~ 105 (235)
++..+.||||+++|++||++.+.. +.++..+.+|+++|||++++++|+.++|+|+||+++++++.+++..|++++....
T Consensus 4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~ 83 (494)
T 3swz_A 4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83 (494)
T ss_dssp --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence 345678999999999999998742 3678999999999999999999999999999999999999998889998887655
Q ss_pred HHHhhcCCcceeecCCCHHHHHHHHHHHHhhcch--hhhhhcccchh---------------------------------
Q 026656 106 QQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNS--NRVQSFRPIRE--------------------------------- 150 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~--------------------------------- 150 (235)
.+.+...+.|++++++|++|+.+|+++ .+.|+. ..+..+.+.+.
T Consensus 84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~ 162 (494)
T 3swz_A 84 LDIASNNRKGIAFADSGAHWQLHRRLA-MATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS 162 (494)
T ss_dssp HHHHTTTTCSSSSSCSSHHHHHHHHHH-HHHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred HHHhccCCCCeEeCCCCHHHHHHHHHH-HHHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence 555544466777776799999999999 798873 33444443332
Q ss_pred -----------------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCC
Q 026656 151 -----------------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKT 195 (235)
Q Consensus 151 -----------------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (235)
+.+|+++++ +....++..+..+.+.++++++++++++..+ .+
T Consensus 163 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~--p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~ 239 (494)
T 3swz_A 163 LICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIF--PNKTLEKLKSHVKIRNDLLNKILENYKEKFR-SD 239 (494)
T ss_dssp HHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTS--CCSHHHHHHHHHHHHHHHHHHHHHHHTTTCC-TT
T ss_pred HHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cc
Confidence 234555544 3344566777788888999999998877543 23
Q ss_pred CcccHHHHHHHHhhhcC--------CCCCCCHHHHHHHHHHHhcccC
Q 026656 196 DQEDIVDVLLQIWKQRG--------SKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 196 ~~~d~l~~ll~~~~~~~--------~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
...|+++.|+++..+.+ .+..++++++.+++.++++||+
T Consensus 240 ~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~ 286 (494)
T 3swz_A 240 SITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGV 286 (494)
T ss_dssp CCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcch
Confidence 46799999998754311 1235899999999999999995
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=99.96 E-value=5.2e-28 Score=196.90 Aligned_cols=204 Identities=23% Similarity=0.408 Sum_probs=135.1
Q ss_pred cccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhH
Q 026656 26 TIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLS 105 (235)
Q Consensus 26 ~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~ 105 (235)
..++.+.||||+++|++||+..+ .++++..+.+++++||++|++++++.++|+++||+++++|+.++...|++++....
T Consensus 4 ~~~~~~~pPgP~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~ 82 (507)
T 3pm0_A 4 KTSSKGKPPGPFAWPLIGNAAAV-GQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFAS 82 (507)
T ss_dssp -------------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHH
T ss_pred ccCCCCCCcCCCCCCeeCchhhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchH
Confidence 34456789999999999999998 68899999999999999999999999999999999999999888888988876554
Q ss_pred HHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhh------cccchh-----------------------------
Q 026656 106 QQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQS------FRPIRE----------------------------- 150 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~------~~~~~~----------------------------- 150 (235)
..... .+.+++++.+|+.|+++|+++ ++.|+...... +.+.+.
T Consensus 83 ~~~~~-~g~~l~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~ 160 (507)
T 3pm0_A 83 FRVVS-GGRSMAFGHYSEHWKVQRRAA-HSMMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDPRPLTVVA 160 (507)
T ss_dssp HHHGG-GGTCSSSSCSSHHHHHHHHHH-HHHHHHSTTSSTTHHHHHHHHHHHHHHHHHHHHHHTTGGGCCBCCHHHHHHH
T ss_pred HHhhc-CCCceEECCCChHHHHHHHHH-HHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHhhcccCCCcChHHHHHHH
Confidence 44433 256776666799999999999 78766433222 333222
Q ss_pred -----------------------------------------ccccccccccCcch---HHHHHHHHHHHHHHHHHHHHHH
Q 026656 151 -----------------------------------------DYFPSIGWVDNITG---MIRRLERNFKEFDAFHQELIEE 186 (235)
Q Consensus 151 -----------------------------------------~~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~ 186 (235)
..+|++.++ +.. ..++..++.+.+.+++.+.+++
T Consensus 161 ~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l--p~~~~~~~~~~~~~~~~~~~~~~~~i~~ 238 (507)
T 3pm0_A 161 VANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYF--PNPVRTVFREFEQLNRNFSNFILDKFLR 238 (507)
T ss_dssp HHHHHHHHHTSCCCCTTCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGS--CSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccccCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHc--CchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 234444433 222 3566777888899999999999
Q ss_pred hhCccCCCCCcccHHHHHHHHhhhcCC------CCCCCHHHHHHHHHHHhcccC
Q 026656 187 HLDPARIKTDQEDIVDVLLQIWKQRGS------KVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 187 ~~~~~~~~~~~~d~l~~ll~~~~~~~~------~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+++..+.++.++|+++.+++..++... +..++++++.+++.++++||+
T Consensus 239 ~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~ 292 (507)
T 3pm0_A 239 HCESLRPGAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATITDIFGASQ 292 (507)
T ss_dssp HHHHCCTTCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHHHHHHHHHH
T ss_pred HHhccccccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHHHHHHhccc
Confidence 887654445678999999976543210 125999999999999999995
No 3
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.95 E-value=5.6e-28 Score=194.66 Aligned_cols=192 Identities=19% Similarity=0.259 Sum_probs=154.4
Q ss_pred CCCCCCCCC-ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHH-
Q 026656 30 IALPPGPRG-LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ- 107 (235)
Q Consensus 30 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~- 107 (235)
.+.||+|++ +|++||++.+ .++++.++.+++++|||||++++++.++|+++||+++++++.+++..|++++......
T Consensus 10 ~~~PP~~~~~lP~iG~~~~~-~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 10 VKSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp CCCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCcCeeeeHHHh-hhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 356788775 8999999988 7899999999999999999999999999999999999999998877787765433222
Q ss_pred HhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------------------------
Q 026656 108 KVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------------------------- 150 (235)
Q Consensus 108 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------------------------- 150 (235)
... |.+++++.+|+.|+++|+++ +++|+...++.+.+.+.
T Consensus 89 ~~~--g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~fG~ 165 (461)
T 3ld6_A 89 PVF--GKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHCLHGK 165 (461)
T ss_dssp HHH--CTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHHHTCH
T ss_pred ccC--CCccccCCCcHHHHHHHHhc-cccccHHHHhhhhHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCc
Confidence 223 66777766799999999999 89999999988877665
Q ss_pred -------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHH
Q 026656 151 -------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLL 205 (235)
Q Consensus 151 -------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll 205 (235)
..+|. +.+.+...+..++.+++.+++.+.|+++++. .+..+|+++.|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~---~~~~~d~l~~ll 238 (461)
T 3ld6_A 166 EIRSQLNEKVAQLYADLDGGFSHAAWLLPG----WLPLPSFRRRDRAHREIKDIFYKAIQKRRQS---QEKIDDILQTLL 238 (461)
T ss_dssp HHHHTCCHHHHHHHHHHHTTSSHHHHHSCT----TSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSHHHHHH
T ss_pred chhhhhhhhhhhhhhhhhhhhhhHHHhhhh----hccCcHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCCcchhhhhH
Confidence 01111 1133455667788899999999999998873 456789999999
Q ss_pred HHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 206 QIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 206 ~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
++..+++ ..+|++++++++.++++||+
T Consensus 239 ~~~~~~~--~~ls~~ei~~~~~~~~~aG~ 265 (461)
T 3ld6_A 239 DATYKDG--RPLTDDEVAGMLIGLLLAGQ 265 (461)
T ss_dssp TCBCTTS--CBCCHHHHHHHHHHHHHHHH
T ss_pred Hhhhccc--CCCCHHHHHHHHHhhhhccc
Confidence 8765543 46999999999999999995
No 4
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=99.95 E-value=3.3e-28 Score=197.64 Aligned_cols=203 Identities=20% Similarity=0.301 Sum_probs=145.3
Q ss_pred hhcccccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCC
Q 026656 22 QRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRP 101 (235)
Q Consensus 22 ~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~ 101 (235)
..++.+++.+.||||++ ++++..++++..+.+|+++|||++++++++.++|+++||+++++|+.++...|++++
T Consensus 20 ~~~~~~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~ 93 (496)
T 3qz1_A 20 WGRWKLRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRP 93 (496)
T ss_dssp ---------CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCC
T ss_pred HhhhhccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCC
Confidence 33345566789999986 444446789999999999999999999999999999999999999988877888877
Q ss_pred chhHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------------------
Q 026656 102 ALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------------------- 150 (235)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------------------- 150 (235)
..........+..+++++++|++|+++|+++ ++.|+...++.+.+.+.
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~g~~w~~~Rr~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~dv 172 (496)
T 3qz1_A 94 QIPSYKLVSQRCQDISLGDYSLLWKAHKKLT-RSALLLGTRSSMEPWVDQLTQEFCERMRVQAGAPVTIQKEFSLLTCSI 172 (496)
T ss_dssp CCTTTTTSCTTCCCSSSSCCSHHHHHHHHHH-HHHHHC--CCCHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHTHHHHHH
T ss_pred CcchHHHhcCCCCceEECCCCHHHHHHHHHH-HHHHhhccHhhHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHH
Confidence 6543333322233666654499999999999 89999766666665554
Q ss_pred ------------------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCC
Q 026656 151 ------------------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIK 194 (235)
Q Consensus 151 ------------------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 194 (235)
+.+|++.++ +.+..++..++.+.+.+++.+.|+++++..+.
T Consensus 173 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l--p~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 249 (496)
T 3qz1_A 173 ICYLTFGNKEDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFF--PNPGLWRLKQAIENRDHMVEKQLRRHKESMVA- 249 (496)
T ss_dssp TTTTSTTCCCHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-
T ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-
Confidence 123333332 23445677888899999999999999875432
Q ss_pred CCcccHHHHHHHHhhhcC--CC-CCCCHHHHHHHHHHHhcccC
Q 026656 195 TDQEDIVDVLLQIWKQRG--SK-VDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 195 ~~~~d~l~~ll~~~~~~~--~~-~~ls~~~i~~~~~~~~~AG~ 234 (235)
+..+|+++.|+++..+.. ++ ..++++++.+++.++++||+
T Consensus 250 ~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~ 292 (496)
T 3qz1_A 250 GQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGT 292 (496)
T ss_dssp SCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHHHHhccccCCcccccHHHHHHHHHHHHHhhh
Confidence 356799999998764321 11 25999999999999999995
No 5
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.95 E-value=4e-27 Score=190.41 Aligned_cols=204 Identities=24% Similarity=0.361 Sum_probs=146.8
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHH
Q 026656 27 IKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQ 106 (235)
Q Consensus 27 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~ 106 (235)
.+..++||||+++|++||++++..++.+..+.+|+++|||||++++|+.++|+|+||+++++|+.+++..|++++.....
T Consensus 6 ss~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~ 85 (479)
T 3tbg_A 6 SSKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPIT 85 (479)
T ss_dssp ---CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGG
T ss_pred CCCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHH
Confidence 34446899999999999999886678899999999999999999999999999999999999999888889888765555
Q ss_pred HHhhc--CCcceeecCCCHHHHHHHHHHHHhhcchhhhhhc--ccchh--------------------------------
Q 026656 107 QKVSY--NGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSF--RPIRE-------------------------------- 150 (235)
Q Consensus 107 ~~~~~--~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~--~~~~~-------------------------------- 150 (235)
..+.. .+.+++++.+|+.|+++|+.+ .+.|+...+... ...+.
T Consensus 86 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (479)
T 3tbg_A 86 QILGFGPRSQGVFLARYGPAWREQRRFS-VSTLRNLGLGKKSLEQWVTEEAACLCAAFANHSGRPFRPNGLLDKAVSNVI 164 (479)
T ss_dssp GGGTCBTTBCCSTTCCSSHHHHHHHHHH-HHHHHHTTSTTCHHHHHHHHHHHHHHHHHHTTTTCCBCTHHHHHHHHHHHH
T ss_pred HHhccCCCCCceeeCCCCHHHHHHHHHH-HHHhcchhhhHHHHHHHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHHHH
Confidence 54432 135566666799999999999 788877655432 11111
Q ss_pred --------------------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccC
Q 026656 151 --------------------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPAR 192 (235)
Q Consensus 151 --------------------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 192 (235)
...|+.. .......+.....+...+.+.+.++++.+..+
T Consensus 165 ~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (479)
T 3tbg_A 165 ASLTCGRRFEYDDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLL---HIPALAGKVLRFQKAFLTQLDELLTEHRMTWD 241 (479)
T ss_dssp HHHHHSCCCCTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGG---GSHHHHHHHTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhhcCCcccccchhhhhhhhhhhhhhhhhhhhhhhhhcccchhc---cchhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 0111111 11222344555566677777777777766544
Q ss_pred CCCCcccHHHHHHHHhhh--cCCCCCCCHHHHHHHHHHHhcccC
Q 026656 193 IKTDQEDIVDVLLQIWKQ--RGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 193 ~~~~~~d~l~~ll~~~~~--~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
......|+++.++..... .+.+..+|++++.+++.++++||+
T Consensus 242 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~ 285 (479)
T 3tbg_A 242 PAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGM 285 (479)
T ss_dssp TTSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhcccCCccchhhHHHHHHHHHHHHhhh
Confidence 445667888877655432 222356999999999999999995
No 6
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=99.94 E-value=4.5e-27 Score=191.25 Aligned_cols=198 Identities=15% Similarity=0.209 Sum_probs=143.7
Q ss_pred cCCCCCCCCCCccccccccCCCC---CChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchh
Q 026656 28 KSIALPPGPRGLPFIGNLHQFDY---SNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALL 104 (235)
Q Consensus 28 ~~~~~~pgp~~~p~~G~~~~~~~---~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~ 104 (235)
.+.+.||||+++|++||++.+.. +..+..+.+|+++|||++++++|+.++|+++||+++++++++ ..|++++...
T Consensus 42 ~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~--~~~~~r~~~~ 119 (503)
T 3s79_A 42 EGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKH--NHYSSRFGSK 119 (503)
T ss_dssp ---CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHS--GGGCCCCCCH
T ss_pred hccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhc--CCCCCcchhh
Confidence 35578999999999999987621 245568889999999999999999999999999999999964 3577665433
Q ss_pred H-HHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh---------------------------------
Q 026656 105 S-QQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE--------------------------------- 150 (235)
Q Consensus 105 ~-~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~--------------------------------- 150 (235)
. .......+.|++++.+|+.|+++|+++ ++.|+...++.+.+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~~l~~l~~~~~~~~~vdl~~~~~~~~~~v 198 (503)
T 3s79_A 120 LGLQCIGMHEKGIIFNNNPELWKTTRPFF-MKALSGPGLVRMVTVCAESLKTHLDRLEEVTNESGYVDVLTLLRRVMLDT 198 (503)
T ss_dssp HHHHHHTCTTSSSTTCCCHHHHHHHHHHH-HHHTSTHHHHHHHHHHHHHHHHHHTTGGGTBCTTSCBCHHHHHHHHHHHH
T ss_pred hhhhhhccCCCceeeCCCccHHHHHHHhh-hHhhChHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEcHHHHHHHHHHHH
Confidence 2 222223356776776799999999999 89999888877655443
Q ss_pred --------------------c---------cccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCC---CCcc
Q 026656 151 --------------------D---------YFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIK---TDQE 198 (235)
Q Consensus 151 --------------------~---------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~ 198 (235)
. ..|.+ +..+....++..++.+.+.+++.++|+++++..+.+ ++..
T Consensus 199 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 276 (503)
T 3s79_A 199 SNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDI--FFKISWLYKKYEKSVKDLKDAIEVLIAEKRRRISTEEKLEECM 276 (503)
T ss_dssp HHHHHTCCCCCHHHHHHHHHHHHHHHHHHTTCCHH--HHHSGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTTTTC
T ss_pred HHHHHcCcccCchhHHHHHHHHHHHHHHHhcCcHH--HhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 0 00000 000111124566778889999999999887654322 2345
Q ss_pred cHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 199 DIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 199 d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
|+++.++++.+++ .++++++.+++.++++||+
T Consensus 277 d~l~~ll~~~~~~----~l~~~~i~~~~~~~~~AG~ 308 (503)
T 3s79_A 277 DFATELILAEKRG----DLTRENVNQCILEMLIAAP 308 (503)
T ss_dssp CHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccC----CCCHHHHHHHHHHHHHHcc
Confidence 9999999886543 4999999999999999995
No 7
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.94 E-value=7.9e-27 Score=187.26 Aligned_cols=197 Identities=15% Similarity=0.211 Sum_probs=155.2
Q ss_pred CCCCCCCCC-ccccccccCCCCCChHHHHHHHHHhhC-CeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHH
Q 026656 30 IALPPGPRG-LPFIGNLHQFDYSNPQNYFWRLSKQYG-PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ 107 (235)
Q Consensus 30 ~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~ 107 (235)
.+.||||++ +|++||+..+ .++++..+.+++++|| ++|++++++.++|+++||+++++++.++...|++++......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~ 80 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQF-GKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMV 80 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHH-HHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGH
T ss_pred CCCCCCCCCCcchhccHHHH-ccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHH
Confidence 467899665 9999999988 6789999999999999 999999999999999999999999988777787776544333
Q ss_pred HhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------------------------
Q 026656 108 KVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------------------------- 150 (235)
Q Consensus 108 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------------------------- 150 (235)
... |.|+++..+|+.|+++|+.+ ++.|+..+++.+.+.+.
T Consensus 81 ~~~--g~~~~~~~~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~vd~~~~~~~~~~~~i~~~~f 157 (450)
T 3gw9_A 81 PVF--GEGVAYAAPYPRMREQLNFL-AEELTIAKFQNFVPAIQHEVRKFMAANWDKDEGEINLLEDCSTMIINTACQCLF 157 (450)
T ss_dssp HHH--CTTSGGGSCHHHHHHHHHHH-HHTTSGGGCTTHHHHHHHHHHHHHHHHSCSSEEEEEHHHHHHHHHHHHHHHHHS
T ss_pred HHh--cCCcccCCCcHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHHHHc
Confidence 333 56776665799999999999 89999988887766554
Q ss_pred ----------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCcc-CCCCCcccHH
Q 026656 151 ----------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPA-RIKTDQEDIV 201 (235)
Q Consensus 151 ----------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~d~l 201 (235)
..+|++.++ +.+..++..++.+.+.+++.++|+++++.. ++++..+|++
T Consensus 158 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l--p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l 235 (450)
T 3gw9_A 158 GEDLRKRLDARRFAQLLAKMESSLIPAAVFLPILLKL--PLPQSARCHEARTELQKILSEIIIARKEEEVNKDSSTSDLL 235 (450)
T ss_dssp CHHHHHHSCHHHHHHHHHHHHHTCCGGGGTCGGGGGS--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSHH
T ss_pred CcchhhhhhhHHHHHHHHHHHhccccchhcccchhcc--CCchhHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccchHH
Confidence 123444333 334456677888899999999999887532 1234568999
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 202 DVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 202 ~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+.++++..+++ ..++++++.+++.++++||+
T Consensus 236 ~~ll~~~~~~~--~~l~~~~i~~~~~~~~~AG~ 266 (450)
T 3gw9_A 236 SGLLSAVYRDG--TPMSLHEVCGMIVAAMFAGQ 266 (450)
T ss_dssp HHHHHCBCTTS--CBCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCC--CCCCHHHHHHHHHHHHHHhh
Confidence 99998764332 46999999999999999995
No 8
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=99.94 E-value=3.2e-26 Score=185.94 Aligned_cols=204 Identities=24% Similarity=0.433 Sum_probs=146.8
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchh
Q 026656 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALL 104 (235)
Q Consensus 25 ~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~ 104 (235)
+..++.+.+|||+++|++||+..+ .++++..+.+++++||||+++++++.++++++||+++++|+.+++..|++++...
T Consensus 10 ~~~~~lp~~PgP~~~p~~G~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~ 88 (495)
T 2hi4_A 10 RVPKGLKSPPEPWGWPLLGHVLTL-GKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLY 88 (495)
T ss_dssp CCCTTCBCCCCCCCBTTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCH
T ss_pred cCCCCCCCCCCCCCCcceeeHHhc-CccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcH
Confidence 334445556999999999999887 6788999999999999999999999999999999999999987767788776543
Q ss_pred HHHHhhcCCcceeec-CCCHHHHHHHHHHHHhhcch---hhh---h---hcccchh------------------------
Q 026656 105 SQQKVSYNGLDVAFA-PYNAYWREIRKICVVHLFNS---NRV---Q---SFRPIRE------------------------ 150 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~---~~l---~---~~~~~~~------------------------ 150 (235)
...... .+.+++++ ++|++|+++|+++ ++.|+. .++ + .+.+.+.
T Consensus 89 ~~~~~~-~~~~l~~~~~~g~~w~~~Rr~~-~~~f~~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~ 166 (495)
T 2hi4_A 89 TSTLIT-DGQSLTFSTDSGPVWAARRRLA-QNALNTFSIASDPASSSSCYLEEHVSKEAKALISRLQELMAGPGHFDPYN 166 (495)
T ss_dssp HHHTST-TSCCTTTSSCCSHHHHHHHHHH-HHHHHHTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHHHHTTSCBCHHH
T ss_pred HHHHhc-CCCCEEEcCCCChHHHHHHHHH-HHHHHHhccCcccccchhhhHHHHHHHHHHHHHHHHHHhccCCCccchHH
Confidence 333222 25666665 4699999999999 787643 221 1 2333221
Q ss_pred ----------------------------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHH
Q 026656 151 ----------------------------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELI 184 (235)
Q Consensus 151 ----------------------------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 184 (235)
..+|+++++ +.+..++..++.+.+.+++.++|
T Consensus 167 ~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l--p~~~~~~~~~~~~~~~~~~~~~i 244 (495)
T 2hi4_A 167 QVVVSVANVIGAMCFGQHFPESSDEMLSLVKNTHEFVETASSGNPLDFFPILRYL--PNPALQRFKAFNQRFLWFLQKTV 244 (495)
T ss_dssp HHHHHHHHHHHHHHHGGGSCTTCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGS--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhc--CchHHHHHHHHHHHHHHHHHHHH
Confidence 112222211 22345667778888999999999
Q ss_pred HHhhCccCCCCCcccHHHHHHHHhhhc--CCCCCCCHHHHHHHHHHHhcccC
Q 026656 185 EEHLDPARIKTDQEDIVDVLLQIWKQR--GSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 185 ~~~~~~~~~~~~~~d~l~~ll~~~~~~--~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+++++..+ .+..+|+++.++++..+. +.+..++++++.+++.++++||+
T Consensus 245 ~~r~~~~~-~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~ 295 (495)
T 2hi4_A 245 QEHYQDFD-KNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLVNDIFGAGF 295 (495)
T ss_dssp HHHHHTCC-TTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHHHHHHHHHH
T ss_pred HHHHHhhc-ccccccHHHHHHHHhhhccCccccCCCHHHHHHHHHHHHHhhh
Confidence 99886432 234579999999764321 11235999999999999999995
No 9
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=99.94 E-value=6e-26 Score=183.71 Aligned_cols=202 Identities=26% Similarity=0.376 Sum_probs=146.3
Q ss_pred cCCCCCCCCCCccccccccCCCCCC--hHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhH
Q 026656 28 KSIALPPGPRGLPFIGNLHQFDYSN--PQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLS 105 (235)
Q Consensus 28 ~~~~~~pgp~~~p~~G~~~~~~~~~--~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~ 105 (235)
++.+.||||+++|++||+..+.... ++..+.+++++||||+++++++.++|+++||+++++|+.+++..|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 4567899999999999998763233 88999999999999999999998999999999999999887777887765433
Q ss_pred HHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhh--hhcccchh---------------------------------
Q 026656 106 QQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRV--QSFRPIRE--------------------------------- 150 (235)
Q Consensus 106 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~--------------------------------- 150 (235)
...+.. +.|++++.+|++|+++|+++ ++.|+...+ ..+.+.+.
T Consensus 89 ~~~~~~-~~~~~~~~~g~~w~~~R~~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~ 166 (481)
T 3czh_A 89 FMKMTK-MGGLLNSRYGRGWVDHRRLA-VNSFRYFGYGQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITN 166 (481)
T ss_dssp HHHHHT-TCSSTTCCSSHHHHHHHHHH-HHHHHHTTTTSTTHHHHHHHHHHHHHHHHHTTTTCCBCCHHHHHHHHHHHHH
T ss_pred HHhhcC-CCCeEeCCCChHHHHHHHHH-HHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHHH
Confidence 333332 34655555799999999999 899876533 33433332
Q ss_pred -------------------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCC
Q 026656 151 -------------------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARI 193 (235)
Q Consensus 151 -------------------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 193 (235)
..+|++.++ +....++..++.+.+.+++.++|+++++..+
T Consensus 167 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l--p~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~- 243 (481)
T 3czh_A 167 LIIFGERFTYEDTDFQHMIELFSENVELAASASVFLYNAFPWIGIL--PFGKHQQLFRNAAVVYDFLSRLIEKASVNRK- 243 (481)
T ss_dssp HHHHSSCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGC--SSSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-
T ss_pred HHHcCCCCCCCCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhC--CchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 012222111 1123456677788899999999999987542
Q ss_pred CCCcccHHHHHHHHhhhcC--CCCCCCHHHHHHHHHHHhcccC
Q 026656 194 KTDQEDIVDVLLQIWKQRG--SKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 194 ~~~~~d~l~~ll~~~~~~~--~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.+.++|+++.|+++..+.. .+..+|++++++++.++++||+
T Consensus 244 ~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~ 286 (481)
T 3czh_A 244 PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGT 286 (481)
T ss_dssp TTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhcc
Confidence 2345799999998754321 1246999999999999999995
No 10
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=99.94 E-value=5.9e-26 Score=183.46 Aligned_cols=202 Identities=26% Similarity=0.401 Sum_probs=145.6
Q ss_pred ccccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchh
Q 026656 25 KTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALL 104 (235)
Q Consensus 25 ~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~ 104 (235)
+.+++.+.||||+++|++||+..+...+++..+.+|+++||+++++++++.++|+++||+++++|+.++...|++++...
T Consensus 4 ~~~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~ 83 (476)
T 3e6i_A 4 KTSSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLP 83 (476)
T ss_dssp ------CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCG
T ss_pred cccCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCc
Confidence 34456678999999999999998856788999999999999999999999999999999999999998877888776544
Q ss_pred HHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhh--hhcccchh--------------------------------
Q 026656 105 SQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRV--QSFRPIRE-------------------------------- 150 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~-------------------------------- 150 (235)
...... +.|+++. +|++|+++|+++ .+.|+...+ ..+.+.+.
T Consensus 84 ~~~~~~--~~~l~~~-~g~~w~~~Rr~~-~~~l~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~dvi 159 (476)
T 3e6i_A 84 AFHAHR--DRGIIFN-NGPTWKDIRRFS-LTTLRNYGMGKQGNESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVI 159 (476)
T ss_dssp GGGGGT--TSSSTTC-CSTTHHHHHHHH-HHHHHHTC-CCSHHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHTHHHHHHH
T ss_pred hhheec--CCCEEec-CCcHHHHHHHHH-HHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCcChHHHHHHHHHHHH
Confidence 444433 2366555 599999999988 777765322 11111111
Q ss_pred --------------------------------------cccc-ccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCcc
Q 026656 151 --------------------------------------DYFP-SIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPA 191 (235)
Q Consensus 151 --------------------------------------~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 191 (235)
..+| ++. +.+...++..++.+.+.+++.+.|+++++..
T Consensus 160 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~lp~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 236 (476)
T 3e6i_A 160 ADILFRKHFDYNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLH---YLPGSHRKVIKNVAEVKEYVSERVKEHHQSL 236 (476)
T ss_dssp HHHHHSCCCCTTCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHT---TSCSHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHcCCCCCCCCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 0011 111 1223446677788889999999999988754
Q ss_pred CCCCCcccHHHHHHHHhhhcC--CCCCCCHHHHHHHHHHHhcccC
Q 026656 192 RIKTDQEDIVDVLLQIWKQRG--SKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 192 ~~~~~~~d~l~~ll~~~~~~~--~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+. +.+.|+++.++++..++. .+..++++++.+++.++++||+
T Consensus 237 ~~-~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~ 280 (476)
T 3e6i_A 237 DP-NCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGT 280 (476)
T ss_dssp CT-TSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHHHHHHHHHH
T ss_pred CC-CCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHHHHHHhcch
Confidence 32 335799999998755322 2345999999999999999995
No 11
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.93 E-value=7.2e-26 Score=182.33 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=150.7
Q ss_pred cccCCCCCCC-CCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchh
Q 026656 26 TIKSIALPPG-PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALL 104 (235)
Q Consensus 26 ~~~~~~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~ 104 (235)
..++.+.||| |+++|++||+..+ .++++.++.+++++||||+++++++.+.++++|++++++++.++...++++....
T Consensus 6 ~~~~~~~PPg~P~~lP~iG~l~~~-~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~ 84 (461)
T 3i3k_A 6 LPAGVKSPPYIFSPIPFLGHAIAF-GKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYS 84 (461)
T ss_dssp ----CCCCCBCCCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHH
T ss_pred CCCCCCCCCCCCCCCCccccHHhh-ccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHH
Confidence 3456678999 8899999999988 6789999999999999999999999999999999999999987766665543221
Q ss_pred -HHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh---------------------------------
Q 026656 105 -SQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE--------------------------------- 150 (235)
Q Consensus 105 -~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~--------------------------------- 150 (235)
....+. |.|+.++.+|+.|+.+|+++ .+.|+...++.+.+.+.
T Consensus 85 ~~~~~~~--g~g~~~~~~g~~w~~~Rr~~-~~~f~~~~l~~~~~~~~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~~~~~ 161 (461)
T 3i3k_A 85 RLTTPVF--GKGVAYDVPNPVFLEQKKML-KSGLNIAHFKQHVSIIEKETKEYFESWGESGEKNVFEALSELIILTASHC 161 (461)
T ss_dssp HHHHHHH--CTTSGGGSCHHHHHHHHHHH-HHHSSHHHHHHHHHHHHHHHHHHGGGGCSEEEEEHHHHHHHHHHHHHHHH
T ss_pred Hhhhhhc--CCeeeeCCCcHHHHHHHHHH-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCcCHHHHHHHHHHHHHHHH
Confidence 112223 66776665699999999999 89999988888776554
Q ss_pred --------c--------------ccc---ccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHH
Q 026656 151 --------D--------------YFP---SIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLL 205 (235)
Q Consensus 151 --------~--------------~~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll 205 (235)
. .+. +..+.+.+.+..++..++.+.+.+++.+.|+++++. .+..+|+++.++
T Consensus 162 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~d~l~~ll 238 (461)
T 3i3k_A 162 LHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS---QEKIDDILQTLL 238 (461)
T ss_dssp HTCHHHHHTCCHHHHHHHHHHHTTSSHHHHHSCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCCCCSHHHHHH
T ss_pred HccHhhhhHHHHHHHHHHHHHHhccccchhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccccccHHHHHH
Confidence 0 000 000001122345667778889999999999999873 345689999999
Q ss_pred HHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 206 QIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 206 ~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
++..+++ ..++++++.+++.++++||+
T Consensus 239 ~~~~~~~--~~l~~~~i~~~~~~l~~ag~ 265 (461)
T 3i3k_A 239 DATYKDG--RPLTDDEVAGMLIGLLLAGQ 265 (461)
T ss_dssp TCBCTTS--CBCCHHHHHHHHHHHHHHHH
T ss_pred HhhhccC--CCCCHHHHHHHHHHHHhhcc
Confidence 8764432 46999999999999999985
No 12
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=99.93 E-value=3.4e-25 Score=179.07 Aligned_cols=201 Identities=19% Similarity=0.354 Sum_probs=147.1
Q ss_pred cCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHH
Q 026656 28 KSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ 107 (235)
Q Consensus 28 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~ 107 (235)
++.+.||||+++|++||+..+..++++..+.+++++|||++++++++.++|+++||+++++|+.++...|++++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH
T ss_pred ccCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh
Confidence 33467899999999999998745778999999999999999999998899999999999999977666787765433333
Q ss_pred HhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhh--hhcccchh-----------------------------------
Q 026656 108 KVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRV--QSFRPIRE----------------------------------- 150 (235)
Q Consensus 108 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l--~~~~~~~~----------------------------------- 150 (235)
.... +.+++++ +|++|+++|+++ ++.|+...+ +.+.+.+.
T Consensus 87 ~~~~-~~~l~~~-~g~~~~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~~ 163 (476)
T 2fdv_A 87 WVFK-GYGVVFS-NGERAKQLRRFS-IATLRDFGVGKRGIEERIQEEAGFLIDALRGTGGANIDPTFFLSRTVSNVISSI 163 (476)
T ss_dssp HHHT-TCSSSSC-CHHHHHHHHHHH-HHHHHHTTTTSHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred hhcC-CCCeEec-CchHHHHHHHHH-HHHHHHhCCChhhHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHHH
Confidence 3322 5677665 599999999999 899987655 44544433
Q ss_pred ---------------------c--------------cccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCC
Q 026656 151 ---------------------D--------------YFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKT 195 (235)
Q Consensus 151 ---------------------~--------------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (235)
. .+|++ +.+.....++..++.+.+.+++.++|+++++..+ .+
T Consensus 164 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l--~~~l~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~ 240 (476)
T 2fdv_A 164 VFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSV--MKHLPGPQQQAFQLLQGLEDFIAKKVEHNQRTLD-PN 240 (476)
T ss_dssp HHSSCCCTTCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH--HTTSCSHHHHHHHHHHHHHHHHHHHHHHHHTTCC-TT
T ss_pred HcCCcCCCCCHHHHHHHHHHHHHHHhhcccccchhhhhhhH--HHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 0 00100 0011122345667778899999999999887532 23
Q ss_pred CcccHHHHHHHHhhhcC--CCCCCCHHHHHHHHHHHhcccC
Q 026656 196 DQEDIVDVLLQIWKQRG--SKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 196 ~~~d~l~~ll~~~~~~~--~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.++|+++.++++..+.+ .+..++++++.+++.++++||+
T Consensus 241 ~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~ 281 (476)
T 2fdv_A 241 SPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGT 281 (476)
T ss_dssp SCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHhcccCccccccHHHHHHHHHHHHHhcc
Confidence 45799999998754321 1246999999999999999995
No 13
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.93 E-value=9.4e-27 Score=188.55 Aligned_cols=197 Identities=17% Similarity=0.268 Sum_probs=134.9
Q ss_pred CCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhc-CccCCCCCchhHHHH
Q 026656 30 IALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTH-DLQFCSRPALLSQQK 108 (235)
Q Consensus 30 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~-~~~~~~~~~~~~~~~ 108 (235)
.+.||||+++|++||+..+ .++++.++.+|+++|||++++++++.++|+++||+++++|+.++ ...|.+++.......
T Consensus 13 ~~~~PGP~~~PliGn~~~~-~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~~ 91 (485)
T 3nxu_A 13 KLGIPGPTPLPFLGNILSY-HKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGF 91 (485)
T ss_dssp HHTCCCCCCBTTTBTGGGG-GGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCGG
T ss_pred hCCCCCCCCcCeecCcHHh-hcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCcccccccc
Confidence 3568999999999999998 67889999999999999999999999999999999999999876 466776654322221
Q ss_pred hhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh--------------------------------------
Q 026656 109 VSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------------------------------- 150 (235)
Q Consensus 109 ~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------------------------------- 150 (235)
. +.++++. +|++|+++|+++ +++|+..+++.+.+.+.
T Consensus 92 -~--~~~l~~~-~g~~w~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~g~~~d~~~~~~~~~~dvi~~~~ 166 (485)
T 3nxu_A 92 -M--KSAISIA-EDEEWKRLRSLL-SPTFTSGKLKEMVPIIAQYGDVLVRNLRREAETGKPVTLKDVFGAYSMDVITSTS 166 (485)
T ss_dssp -G--GGSTTTC-CHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEHHHHHHHHHHHHHHHHH
T ss_pred -c--ccCcccc-CCcHHHHHHhhc-ChhcCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHH
Confidence 1 4455444 699999999999 89999999988877665
Q ss_pred -----cc-----ccccc-------------------cccCcchHHHH------HHHHHHHHHHHHHHHHHHhhCccCCCC
Q 026656 151 -----DY-----FPSIG-------------------WVDNITGMIRR------LERNFKEFDAFHQELIEEHLDPARIKT 195 (235)
Q Consensus 151 -----~~-----~p~~~-------------------~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (235)
+. -++.. .+.+..+.... ..+..+.+.+.+++.++++.+. ..+
T Consensus 167 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 244 (485)
T 3nxu_A 167 FGVNIDSLNNPQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLED--TQK 244 (485)
T ss_dssp HSCCCCGGGCTTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHHC--C--
T ss_pred cCCccccccCCCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc--cCC
Confidence 00 00000 00000000000 0123344555566666555432 224
Q ss_pred CcccHHHHHHHHhhhcC--CCCCCCHHHHHHHHHHHhcccC
Q 026656 196 DQEDIVDVLLQIWKQRG--SKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 196 ~~~d~l~~ll~~~~~~~--~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
...|+++.++++..+++ .+..++++++++++.++++||+
T Consensus 245 ~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~~~l~~AG~ 285 (485)
T 3nxu_A 245 HRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGY 285 (485)
T ss_dssp -CCCHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHH
T ss_pred CcccHHHHHHHhhhccccccccCCCHHHHHHHHHHHHHHhh
Confidence 56799999998764321 1245999999999999999995
No 14
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=99.93 E-value=2.7e-25 Score=179.69 Aligned_cols=203 Identities=24% Similarity=0.421 Sum_probs=143.2
Q ss_pred cCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHH
Q 026656 28 KSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ 107 (235)
Q Consensus 28 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~ 107 (235)
++.+.||||+++|++||+..+..++++..+.+++++|||++++++++.+.|+++||+++++|+.++...|++++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 1po5_A 7 SKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD 86 (476)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred CCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 33468899999999999998755788999999999999999999998899999999999999977667787665432222
Q ss_pred HhhcCCcceeecCCCHHHHHHHHHHHHhhcchh--hhhhcccchh-----------------------------------
Q 026656 108 KVSYNGLDVAFAPYNAYWREIRKICVVHLFNSN--RVQSFRPIRE----------------------------------- 150 (235)
Q Consensus 108 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~----------------------------------- 150 (235)
... .+.+++++ +|++|+++|+++ ++.|+.. .++.+.+.+.
T Consensus 87 ~~~-~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~~d~~~~~~~~~~~vi~~~ 163 (476)
T 1po5_A 87 PIF-QGYGVIFA-NGERWRALRRFS-LATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSI 163 (476)
T ss_dssp SCC-SSCCCCCS-SHHHHHHHHHHH-HHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTTTCCBCCHHHHHHHHHHHHHHH
T ss_pred hhc-CCCceEec-CCcHHHHHHHHH-HHHHHHhCCChhHHHHHHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHHHHHHH
Confidence 221 24566665 699999999998 7888776 3333433332
Q ss_pred ---------------------ccc-----cccc---c----ccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCc
Q 026656 151 ---------------------DYF-----PSIG---W----VDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQ 197 (235)
Q Consensus 151 ---------------------~~~-----p~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 197 (235)
..+ ++.. . +.+.+...++..++.+.+.+++.++|+++++..+ .+.+
T Consensus 164 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~~~ 242 (476)
T 1po5_A 164 VFGKRFDYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLD-PSNP 242 (476)
T ss_dssp HHSSCCCTTCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSSCSHHHHHHHHHHHHHHHHHHHHHHHTTCC-TTSC
T ss_pred HcCCCCCCCCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCc
Confidence 000 0000 0 0001111245667778899999999999987532 2345
Q ss_pred ccHHHHHHHHhhhc--CCCCCCCHHHHHHHHHHHhcccC
Q 026656 198 EDIVDVLLQIWKQR--GSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 198 ~d~l~~ll~~~~~~--~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+|+++.|+++..+. +.+..++++++++++.++++||+
T Consensus 243 ~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~ 281 (476)
T 1po5_A 243 RDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGT 281 (476)
T ss_dssp CSHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhccCCCCCCCHHHHHHHHHHHHhhcc
Confidence 79999998754321 11235899999999999999995
No 15
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=99.93 E-value=1.9e-25 Score=180.56 Aligned_cols=202 Identities=23% Similarity=0.406 Sum_probs=137.2
Q ss_pred ccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHH
Q 026656 27 IKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQ 106 (235)
Q Consensus 27 ~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~ 106 (235)
++..+.||||+++|++||+..+..++++..+.+++++|||++++++++.+.|+++||+++++|+.++...|++++.....
T Consensus 7 ~~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~ 86 (477)
T 1r9o_A 7 SGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLA 86 (477)
T ss_dssp --CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCC
T ss_pred cCCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhh
Confidence 34446889999999999998873456788999999999999999998889999999999999997766677765432211
Q ss_pred HHhhcCCcceeecCCCHHHHHHHHHHHHhhcchh--hhhhcccchh----------------------------------
Q 026656 107 QKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSN--RVQSFRPIRE---------------------------------- 150 (235)
Q Consensus 107 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~--~l~~~~~~~~---------------------------------- 150 (235)
.... .+.+++++ +|++|+++|+++ .+.|+.. .++.+.+.+.
T Consensus 87 ~~~~-~~~~l~~~-~g~~w~~~Rr~~-~~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~vi~~ 163 (477)
T 1r9o_A 87 ERAN-RGFGIVFS-NGKKWKEIRRFS-LMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICS 163 (477)
T ss_dssp CTTT-CTTSSTTC-CHHHHHHHHHHH-HHHHTTSSSCSSCHHHHHHHHHHHHHHHHHTTTTSCBCTHHHHHHHHHHHHHH
T ss_pred hhcc-CCCceEec-CChHHHHHHHHH-HHHHHHhCCChHHHHHHHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHHHHH
Confidence 2121 24566555 699999999998 7888876 3333333322
Q ss_pred ----------------------c--------------cccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCC
Q 026656 151 ----------------------D--------------YFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIK 194 (235)
Q Consensus 151 ----------------------~--------------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 194 (235)
. .+|++. .+.+...++..++.+.+.+++.++|+++++..+ .
T Consensus 164 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~--~~lp~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~ 240 (477)
T 1r9o_A 164 IIFHKRFDYKDQQFLNLMEKLNENIKILSSPWIQICNNFSPII--DYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD-M 240 (477)
T ss_dssp HHHSCCCCTTCHHHHHHHHHHHHHHHHHTCCBC-------CCC--SCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCC-T
T ss_pred HHccCcCCCCCHHHHHHHHHHHHHHHhhccchhHHHhhccHHH--HhcchHHHHHHHHHHHHHHHHHHHHHHHHhccC-C
Confidence 0 011100 011122355667778899999999999876432 2
Q ss_pred CCcccHHHHHHHHhhhc--CCCCCCCHHHHHHHHHHHhcccC
Q 026656 195 TDQEDIVDVLLQIWKQR--GSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 195 ~~~~d~l~~ll~~~~~~--~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+.++|+++.+++...++ +.+..+|++++.+++.++++||+
T Consensus 241 ~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~ 282 (477)
T 1r9o_A 241 NNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGT 282 (477)
T ss_dssp TCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHhhccc
Confidence 34579999998654321 11346999999999999999995
No 16
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.92 E-value=6.8e-25 Score=177.46 Aligned_cols=201 Identities=13% Similarity=0.193 Sum_probs=142.2
Q ss_pred hcccccCCCCCCCCCCccccccccCCC----CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCC
Q 026656 23 RYKTIKSIALPPGPRGLPFIGNLHQFD----YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFC 98 (235)
Q Consensus 23 ~~~~~~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~ 98 (235)
+....++.+.+|||+++|++||++.+. .++++..+.+++++|||++++++|+.+.|+++||+++++|+.++ ..|.
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~ 94 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHP 94 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCC
Confidence 445667888899999999999998763 24678899999999999999999999999999999999999874 5677
Q ss_pred CCCchh---HHHHhhcCCcceeecCCCHHHHHHHHHHHHhhc-chhhhhhcccchh------------------------
Q 026656 99 SRPALL---SQQKVSYNGLDVAFAPYNAYWREIRKICVVHLF-NSNRVQSFRPIRE------------------------ 150 (235)
Q Consensus 99 ~~~~~~---~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~------------------------ 150 (235)
+++... ........+.|+++. +|++|+++|+.+ ++.| +...++.+.+.+.
T Consensus 95 ~r~~~~~~~~~~~~~~~~~~l~~~-~g~~w~~~Rr~~-~~~f~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~g~~vd~~ 172 (482)
T 3k9v_A 95 QRLEIKPWKAYRDHRNEAYGLMIL-EGQEWQRVRSAF-QKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDLY 172 (482)
T ss_dssp CCCCCHHHHHHHHHHTCCCCTTTC-CHHHHHHHHHHH-HHHHTCHHHHGGGHHHHHHHHHHHHHHHHHHCCTTSCCTTHH
T ss_pred CCCCchHHHHHHHhcCCCCCceeC-CCchHHHHHHHh-hHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHH
Confidence 776432 122222235676555 599999999999 7876 6766766655443
Q ss_pred -----------------ccc--------cc--------------cccc-cC--------cchHHHHHHHHHHHHHHHHHH
Q 026656 151 -----------------DYF--------PS--------------IGWV-DN--------ITGMIRRLERNFKEFDAFHQE 182 (235)
Q Consensus 151 -----------------~~~--------p~--------------~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~ 182 (235)
.-+ .. ...+ .. .....++..++.+.+.+++.+
T Consensus 173 ~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (482)
T 3k9v_A 173 SELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRLNTKVWQAHTLAWDTIFKSVKP 252 (482)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGGGSSSCHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 000 00 0000 00 112234455666778888888
Q ss_pred HHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 183 LIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 183 ~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.|+++++..+ .+...|+++.+++. + .++++++.+++.++++||+
T Consensus 253 ~i~~r~~~~~-~~~~~d~l~~ll~~---~----~l~~~ei~~~~~~~~~AG~ 296 (482)
T 3k9v_A 253 CIDNRLQRYS-QQPGADFLCDIYQQ---D----HLSKKELYAAVTELQLAAV 296 (482)
T ss_dssp HHHHHHHHTT-TCTTSCHHHHHHHH---T----CCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-cCCchHHHHHHHhc---c----CCCHHHHHHHHHHHHHhhh
Confidence 8988876442 23456888887764 2 3899999999999999995
No 17
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.92 E-value=1.9e-24 Score=174.39 Aligned_cols=197 Identities=13% Similarity=0.227 Sum_probs=141.2
Q ss_pred CCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHh
Q 026656 30 IALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKV 109 (235)
Q Consensus 30 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~ 109 (235)
.+.+|||+++|++||++.+..++++..+.+++++||||+++++++.+.|+++||+++++|+.+. .|.+... ......
T Consensus 2 ~~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~ 78 (470)
T 2ij2_A 2 IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFV 78 (470)
T ss_dssp -CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHH
T ss_pred CCCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHH
Confidence 3568999999999999988556788899999999999999999999999999999999999542 3543222 111111
Q ss_pred -hcCCcceeec-CCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------------------------
Q 026656 110 -SYNGLDVAFA-PYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------------------------- 150 (235)
Q Consensus 110 -~~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------------------------- 150 (235)
...+.++++. .+|++|+++|+++ +++|+..+++.+.+.+.
T Consensus 79 ~~~~~~~l~~~~~~g~~w~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~vd~~~~~~~~~~~vi~~~~ 157 (470)
T 2ij2_A 79 RDFAGDGLFTSWTHEKNWKKAHNIL-LPSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCG 157 (470)
T ss_dssp HHHHTTSGGGSCTTSHHHHHHHHHH-GGGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEcCCCchHHHHHHHHh-ccccCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeEEHHHHHHHHHHHHHHHHH
Confidence 1114566554 4699999999999 89999998888766554
Q ss_pred -----ccc------ccccc-----------------c-cCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHH
Q 026656 151 -----DYF------PSIGW-----------------V-DNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIV 201 (235)
Q Consensus 151 -----~~~------p~~~~-----------------~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l 201 (235)
+.. ++... + ..+....++..++.+.+.+++.++|+++++. ++.++|++
T Consensus 158 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~~dll 234 (470)
T 2ij2_A 158 FNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS---GEQSDDLL 234 (470)
T ss_dssp HSCCCCGGGCSSCCHHHHHHHHHHHHHHHTC---CTTSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCSSHH
T ss_pred cCCcccccccCCCCHHHHHHHHHHHHHHHHHhhhhhHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCchhHH
Confidence 000 00000 0 0011123445566778889999999988763 24457999
Q ss_pred HHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 202 DVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 202 ~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+.|+++.++++ +..+|++++.+++.++++||+
T Consensus 235 ~~ll~~~~~~~-~~~ls~~ei~~~~~~~~~AG~ 266 (470)
T 2ij2_A 235 THMLNGKDPET-GEPLDDENIRYQIITFLIAGH 266 (470)
T ss_dssp HHHHHCCCTTT-CCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCccc-CCCCCHHHHHHHHHHHHHHhh
Confidence 99998754221 236999999999999999995
No 18
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.92 E-value=1.7e-24 Score=173.54 Aligned_cols=201 Identities=17% Similarity=0.268 Sum_probs=145.1
Q ss_pred hcccccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCc
Q 026656 23 RYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA 102 (235)
Q Consensus 23 ~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~ 102 (235)
+....++.+.||||+++|++||+..+ ..+++ .+.+++++|||++++++++.+.|+++||+++++|+.++...|+.+..
T Consensus 4 yp~~~~~~~~pPgp~~~P~iG~~~~~-~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~ 81 (444)
T 2ve3_A 4 SPTNLNSLPIPPGDFGLPWLGETLNF-LNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP 81 (444)
T ss_dssp -----CCCCCCCCCCCBTTTBTHHHH-HHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC
T ss_pred CCCCCCCCCCCCCCCCCCccccHHHH-hcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh
Confidence 33445667789999999999999877 45566 78899999999999998888899999999999999876555653322
Q ss_pred hhHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh--------------------------------
Q 026656 103 LLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------------------------- 150 (235)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------------------------- 150 (235)
. ...... +..++++ .+|++|+++|+++ ++.|++.+++.+.+.+.
T Consensus 82 ~-~~~~~~-g~~~l~~-~~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~vi~~ 157 (444)
T 2ve3_A 82 L-STRILL-GPNALAT-QMGEIHRSRRKIL-YQAFLPRTLDSYLPKMDGIVQGYLEQWGKANEVIWYPQLRRMTFDVAAT 157 (444)
T ss_dssp H-HHHHHH-CTTSGGG-CCHHHHHHHHHHH-HGGGCHHHHHTTHHHHHHHHHHHHHHHHHSSEEEHHHHHHHHHHHHHHH
T ss_pred H-HHHHHh-Ccccccc-CCchHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhcCCCcEeHHHHHHHHHHHHHHH
Confidence 2 222222 1236655 4699999999999 89999999988877665
Q ss_pred cccc--------ccc----------cc--cCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhh
Q 026656 151 DYFP--------SIG----------WV--DNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQ 210 (235)
Q Consensus 151 ~~~p--------~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~ 210 (235)
..+. +.. .+ ..+....++..++.+.+.+++.++|+++++. ++.++|+++.|+++.++
T Consensus 158 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~~d~l~~ll~~~~~ 234 (444)
T 2ve3_A 158 LFMGEKVSQNPQLFPWFETYIQGLFSLPIPLPNTLFGKSQRARALLLAELEKIIKARQQQ---PPSEEDALGILLAARDD 234 (444)
T ss_dssp HHTCHHHHSCTTHHHHHHHHHHHHSSCCCCSTTSHHHHHHHHHHHHHHHHHHHHHHHHTS---CCCCSSHHHHHHHCBCT
T ss_pred HHcCCCcccHHHHHHHHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHHHHHHHHhcC---CCCccCHHHHHHhcccc
Confidence 0010 000 00 0011223556677788999999999999873 34567999999987543
Q ss_pred cCCCCCCCHHHHHHHHHHHhcccC
Q 026656 211 RGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 211 ~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
++ ..++++++.+++.++++||+
T Consensus 235 ~~--~~l~~~~i~~~~~~~~~AG~ 256 (444)
T 2ve3_A 235 NN--QPLSLPELKDQILLLLFAGH 256 (444)
T ss_dssp TS--CBCCHHHHHHHHHHHHHHHH
T ss_pred CC--CCCCHHHHHHHHHHHHHHcc
Confidence 22 36999999999999999995
No 19
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.91 E-value=5.5e-24 Score=171.09 Aligned_cols=196 Identities=15% Similarity=0.191 Sum_probs=127.0
Q ss_pred CCCCC-CCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHh
Q 026656 31 ALPPG-PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKV 109 (235)
Q Consensus 31 ~~~pg-p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~ 109 (235)
+.||| |+++|++||+..+ ..+++..+.+++++|||++++++++.++++++||+++++|+.++...|++++........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~ 82 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEF-RTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPI 82 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHH-TTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHH
T ss_pred CCCCCCCCCCCCccCHHHH-hhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhh
Confidence 57898 8899999999988 678999999999999999999999989999999999999998766667766543222222
Q ss_pred hcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh---------------------------------------
Q 026656 110 SYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE--------------------------------------- 150 (235)
Q Consensus 110 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~--------------------------------------- 150 (235)
. +.++. . +|+.|+++|+++ +++|+..+++.+.+.+.
T Consensus 83 ~--g~~~~-~-~~~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG~~~ 157 (455)
T 2cib_A 83 F--GEGVV-F-DASPERRKEMLH-NAALRGEQMKGHAATIEDQVRRMIADWGEAGEIDLLDFFAELTIYTSSACLIGKKF 157 (455)
T ss_dssp H--C-----------------------CCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHHHHHTCHHH
T ss_pred c--CCccc-c-CcHHHHHHHhhh-ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCcEeHHHHHHHHHHHHHHHHHcCCCc
Confidence 2 34543 3 599999999999 89999999888777665
Q ss_pred -c----------------cccccccccC-cchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcC
Q 026656 151 -D----------------YFPSIGWVDN-ITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRG 212 (235)
Q Consensus 151 -~----------------~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~ 212 (235)
. ..++...+.+ +.+..++..++.+.+.+++.++|+++++.........|+++.|+++.++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~dll~~ll~~~~~~~ 237 (455)
T 2cib_A 158 RDQLDGRFAKLYHELERGTDPLAYVDPYLPIESFRRRDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETG 237 (455)
T ss_dssp HTTCCHHHHHHHHHHHTTCCGGGGTCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CCCHHHHHHHCBCTTS
T ss_pred chhhhHHHHHHHHHHHhhhhHHHHhcccCCChhHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHhhhhcC
Confidence 0 0000000011 112345566777889999999999987643211123399999998754322
Q ss_pred CCCC-CCHHHHHHHHHHHhcccC
Q 026656 213 SKVD-ITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 213 ~~~~-ls~~~i~~~~~~~~~AG~ 234 (235)
.. ++++++.+++.++++||+
T Consensus 238 --~~~l~~~~i~~~~~~l~~AG~ 258 (455)
T 2cib_A 238 --TPRFSADEITGMFISMMFAGH 258 (455)
T ss_dssp --SBSCCHHHHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHHHHhcc
Confidence 34 999999999999999995
No 20
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.91 E-value=5.6e-25 Score=177.44 Aligned_cols=192 Identities=18% Similarity=0.278 Sum_probs=120.4
Q ss_pred CCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccC-CCCCchhHHHH
Q 026656 30 IALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQF-CSRPALLSQQK 108 (235)
Q Consensus 30 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~-~~~~~~~~~~~ 108 (235)
...||||+++|++||+..+ .++++.++.++++ ||||+++++++.++++++||+++++|+.++ .| .+.+.......
T Consensus 22 ~eppPgP~~~P~iG~~~~~-~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~ 97 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRL-ARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEG 97 (467)
T ss_dssp CBCCEECCCCSTTHHHHHH-HHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC------------
T ss_pred CCCCCCCCCCCcccchHHh-ccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHH
Confidence 4458899999999999988 6789999999988 999999999999999999999999999866 45 33322222222
Q ss_pred hhcCC-cceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------------------------
Q 026656 109 VSYNG-LDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------------------------- 150 (235)
Q Consensus 109 ~~~~~-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------------------------- 150 (235)
.. + .+++. .+|+.|+++|+++ +++|+..+++.+.+.+.
T Consensus 98 ~~--g~~~l~~-~dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~vi~~~~~g~ 173 (467)
T 3dbg_A 98 LL--GKEGVAT-ANGPLHRRQRRTI-QPAFRLDAIPAYGPIMEEEAHALTERWQPGKTVDATSESFRVAVRVAARCLLRG 173 (467)
T ss_dssp ---------------------CGGG-HHHHSTTTSTTTHHHHHHHHHHHHHHSCTTSCEEHHHHHHHHHHHHHHHHHSCS
T ss_pred hc--CCCCccc-CCcHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhccCCcCcHHHHHHHHHHHHHHHHHhCC
Confidence 22 3 56644 4699999999999 89999999998877665
Q ss_pred ------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHH
Q 026656 151 ------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQ 206 (235)
Q Consensus 151 ------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~ 206 (235)
..+|+......+.+..++..++.+.+.+++.++|+++++. ++.++|+++.|++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~---~~~~~dll~~ll~ 250 (467)
T 3dbg_A 174 QYMDERAERLCVALATVFRGMYRRMVVPLGPLYRLPLPANRRFNDALADLHLLVDEIIAERRAS---GQKPDDLLTALLE 250 (467)
T ss_dssp SCCHHHHHHHHHHHHHHHHC------------------------CCHHHHHHHHHHHHHHHTTC---CSSCCSHHHHHTT
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhccchhhhhhCCChHhHHHHHHHHHHHHHHHHHHHHHHhc---CCCchHHHHHHHh
Confidence 0111100000011223455666788899999999998873 3456799999998
Q ss_pred HhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 207 IWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 207 ~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+.++++ ..++++++.+++.++++||+
T Consensus 251 ~~~~~~--~~ls~~ei~~~~~~l~~AG~ 276 (467)
T 3dbg_A 251 AKDDNG--DPIGEQEIHDQVVAILTPGS 276 (467)
T ss_dssp C----------CHHHHHHHHHHHHHHHH
T ss_pred hccCCC--CCCCHHHHHHHHHHHHHHhH
Confidence 765432 35999999999999999995
No 21
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.89 E-value=2.6e-23 Score=166.20 Aligned_cols=194 Identities=16% Similarity=0.197 Sum_probs=131.3
Q ss_pred cCCCCCCCCCCcccccccc-CCCCCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCchhH
Q 026656 28 KSIALPPGPRGLPFIGNLH-QFDYSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPALLS 105 (235)
Q Consensus 28 ~~~~~~pgp~~~p~~G~~~-~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~ 105 (235)
+..+.||||+++|++|++. .+ ..+++..+.++ ++||||+++++ ++.++|+++||+++++|+.++ .|++++....
T Consensus 23 ~~~~~~PGP~~~p~lG~~~~~~-~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~ 98 (436)
T 2cd8_A 23 RTQQGTTASPPVLDLGALGQDF-AADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNST 98 (436)
T ss_dssp -----------CCBHHHHHHHH-HHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCS
T ss_pred hhccCCCCCCccccCCCCCccc-ccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCcccccccc
Confidence 3346789999999999986 44 57889999999 89999999998 678899999999999999865 5766643111
Q ss_pred HHHh---hcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh------------------cccccc-ccc----
Q 026656 106 QQKV---SYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------DYFPSI-GWV---- 159 (235)
Q Consensus 106 ~~~~---~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------~~~p~~-~~~---- 159 (235)
.... ...+.++++ .+|++|+++|+++ +++|++.+++.+.+.+. ++...+ ..+
T Consensus 99 ~~~~~~~~~~~~~l~~-~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~~~~~v 176 (436)
T 2cd8_A 99 TPLTEAEAALNHNMLE-SDPPRHTRLRKLV-AREFTMRRVELLRPRVQEIVDGLVDAMLAAPDGRADLMESLAWPLPITV 176 (436)
T ss_dssp SCCCTTGGGTCCSGGG-CCTTHHHHHHHHH-GGGSSHHHHHTTHHHHHHHHHHHHHHHHTCTTSCEEHHHHTTTHHHHHH
T ss_pred cccccccccccccccc-cCchHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHH
Confidence 1110 112456554 4699999999999 89999999988877665 001101 000
Q ss_pred ----c-Ccch---H-------------HHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCC
Q 026656 160 ----D-NITG---M-------------IRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDIT 218 (235)
Q Consensus 160 ----~-~~~~---~-------------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls 218 (235)
+ .... . .++..++.+++.+++.++|+++++. ..+|+++.|+++.++++ ..+|
T Consensus 177 i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~~--~~ls 249 (436)
T 2cd8_A 177 ISELLGVPEPDRAAFRVWTDAFVFPDDPAQAQTAMAEMSGYLSRLIDSKRGQ-----DGEDLLSALVRTSDEDG--SRLT 249 (436)
T ss_dssp HHHHHTCCGGGHHHHHHHHHHHHSCSSTTHHHHHHHHHHHHHHHHHHHHTTS-----CCCSHHHHHHHHHHHCT--TTSC
T ss_pred HHHHhCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCHHHHHHHhhhccC--CCCC
Confidence 0 0000 0 0234456677888999999988762 34799999998765422 3699
Q ss_pred HHHHHHHHHHHhcccC
Q 026656 219 WDHIKAVLMVKFHNQY 234 (235)
Q Consensus 219 ~~~i~~~~~~~~~AG~ 234 (235)
++++.+++.++++||+
T Consensus 250 ~~ei~~~~~~l~~AG~ 265 (436)
T 2cd8_A 250 SEELLGMAHILLVAGH 265 (436)
T ss_dssp HHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999995
No 22
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.89 E-value=1.2e-23 Score=170.58 Aligned_cols=195 Identities=12% Similarity=0.119 Sum_probs=138.8
Q ss_pred ccccCCCCCCCCCC-ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCc-cCCCCCc
Q 026656 25 KTIKSIALPPGPRG-LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDL-QFCSRPA 102 (235)
Q Consensus 25 ~~~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~-~~~~~~~ 102 (235)
+.++..+.||||++ +|++||+..+ .++++.++.+++++||||+++++++.++|+|+||+++++++.++.. .+..++.
T Consensus 7 ~~~~~~~~PPgp~~~lPliG~~~~~-~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~ 85 (491)
T 3v8d_A 7 SRRRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF 85 (491)
T ss_dssp CCCCCTTSCCEEEEEESSTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHH
T ss_pred hhccCCCCCCCCCCCcceeccHHHH-hcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHH
Confidence 34455678999998 6999999998 7899999999999999999999999999999999999999975531 2322222
Q ss_pred hhHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh--------------------------------
Q 026656 103 LLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------------------------- 150 (235)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------------------------- 150 (235)
.. ..... +.+.....+|+.|+++|+.+ .++|++.+++.+.+.+.
T Consensus 86 ~~-~~~~~--g~~~~~~~~g~~~~~~Rr~~-~~~f~~~~l~~~~~~i~~~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~ 161 (491)
T 3v8d_A 86 AL-SAKAF--GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTESMMENLQRIMRPPVSSNSKTAAWVTEGMYSFCYRV 161 (491)
T ss_dssp HH-HHHHH--TCCCCCGGGSSBCCCHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHSCCSSCGGGGCSCEEEEHHHHHHHH
T ss_pred HH-HHHhc--CCcccccccchhHHHHHHHH-HHHcCccchHHHHHHHHHHHHHHHHhhhhcccCCCCCcccCHHHHHHHH
Confidence 22 22222 33443444599999999998 89999999888766553
Q ss_pred -----------------------------------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCC
Q 026656 151 -----------------------------------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKT 195 (235)
Q Consensus 151 -----------------------------------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 195 (235)
+.+|.+.. ..+....++..++.+++.+++.+.++++++
T Consensus 162 ~~~~~~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~p~~~~~~~~~a~~~l~~~~~~~~~~~~~------ 234 (491)
T 3v8d_A 162 MFEAGYLTIFGRDLTRRDTQKAHILNNLDNFKQFDKVFPALVA-GLPIHMFRTAHNAREKLAESLRHENLQKRE------ 234 (491)
T ss_dssp HHHHHHHHHHCBCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHT-TCCGGGCHHHHHHHHHHHHHTSHHHHTTCB------
T ss_pred HHHHHHHHHcCccccccchhhhhhHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHHHHHHHHhccc------
Confidence 00000000 001222345556666666666665555443
Q ss_pred CcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 196 DQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 196 ~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
...|+++.+++..++++ .++++++.+++..+++||+
T Consensus 235 ~~~d~l~~l~~~~~~~~---~~~~~ei~~~~~~~~~ag~ 270 (491)
T 3v8d_A 235 SISELISLRMFLNDTLS---TFDDLEKAKTHLVVLWASQ 270 (491)
T ss_dssp SCCHHHHHHHHHHHHHB---CCCHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhhccC---CCchHHHHHHHHHHHHHhH
Confidence 34799999998766543 5999999999999999985
No 23
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.88 E-value=2e-22 Score=163.22 Aligned_cols=122 Identities=16% Similarity=0.227 Sum_probs=92.0
Q ss_pred ccccCCCCCCCCCCccccccccCCC----CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCC
Q 026656 25 KTIKSIALPPGPRGLPFIGNLHQFD----YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSR 100 (235)
Q Consensus 25 ~~~~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~ 100 (235)
+..++.+.+|||+..++. |++.+. ..+++..+.+++++||||+++++|+.+.|+++||+++++|+.++ ..|+++
T Consensus 3 r~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~f~~r 80 (487)
T 3n9y_A 3 RSPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSE-GPNPER 80 (487)
T ss_dssp -CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTC-CSSCCC
T ss_pred CCCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhC-CCCCCC
Confidence 355677889999987754 665542 23678889999999999999999999999999999999999866 467777
Q ss_pred CchhHH---HHhhcCCcceeecCCCHHHHHHHHHHHHh-hcchhhhhhcccchh
Q 026656 101 PALLSQ---QKVSYNGLDVAFAPYNAYWREIRKICVVH-LFNSNRVQSFRPIRE 150 (235)
Q Consensus 101 ~~~~~~---~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~~~ 150 (235)
+..... ......+.+++. .+|++|+++|+++ ++ +|+..+++.+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~l~~-~~g~~w~~~Rr~l-~~~~fs~~~l~~~~~~i~ 132 (487)
T 3n9y_A 81 FLIPPWVAYHQYYQRPIGVLL-KKSAAWKKDRVAL-NQEVMAPEATKNFLPLLD 132 (487)
T ss_dssp CCCHHHHHHHHHTTCCCCGGG-CCHHHHHHHHHHH-HHHHTSHHHHTTHHHHHH
T ss_pred CCCcHHHHHHHHccccCCCcc-CCcHHHHHHHHhc-CcccCCchHHHHhhhHHH
Confidence 643221 122223556644 4699999999999 77 599988888766554
No 24
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.85 E-value=4.4e-21 Score=151.93 Aligned_cols=188 Identities=14% Similarity=0.128 Sum_probs=127.1
Q ss_pred CCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHhcC-ccCCCCCchhH---H
Q 026656 32 LPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKTHD-LQFCSRPALLS---Q 106 (235)
Q Consensus 32 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~~~-~~~~~~~~~~~---~ 106 (235)
.||||+++|++|++.. +++..+.++. +||||+++.++ |.+.+++++++++++++.++. ..+..++.... .
T Consensus 2 ~pPGp~~~P~~g~~~~----~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~ 76 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP----EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSAS 76 (404)
T ss_dssp ----CCBSSCCCSSTT----SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHH
T ss_pred CCCCCCCCCCCCCcCC----CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCcccccc
Confidence 4899999999999753 7888898885 59999999874 567788999999999998653 22333322111 1
Q ss_pred H-HhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------c----cccccccc---------
Q 026656 107 Q-KVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------D----YFPSIGWV--------- 159 (235)
Q Consensus 107 ~-~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------~----~~p~~~~~--------- 159 (235)
. ....++.++++ .+|++|+++|+++ +++|++.+++.+.+.+. . ...+...+
T Consensus 77 ~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~d~~~~~~~~~~~~i~ 154 (404)
T 1jfb_A 77 GKQAAKAKPTFVD-MDPPEHMHQRSMV-EPTFTPEAVKNLQPYIQRTVDDLLEQMKQKGCANGPVDLVKEFALPVPSYII 154 (404)
T ss_dssp HHHHTTSCCCGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCEEHHHHTTTHHHHHHH
T ss_pred ccchhcccCcccc-cCchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHH
Confidence 0 11112344544 4699999999999 89999999988877665 0 00000000
Q ss_pred ---------------------cCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCC
Q 026656 160 ---------------------DNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDIT 218 (235)
Q Consensus 160 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls 218 (235)
....+..++..++.+.+.+++.++|+++++. ..+|+++.|+++..++ ..+|
T Consensus 155 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~---~~l~ 226 (404)
T 1jfb_A 155 YTLLGVPFNDLEYLTQQNAIRTNGSSTAREASAANQELLDYLAILVEQRLVE-----PKDDIISKLCTEQVKP---GNID 226 (404)
T ss_dssp HHHHTCCGGGHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHTTTT---TSSC
T ss_pred HHHcCCCHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHhC-----CCCcHHHHHHHhhccC---CCCC
Confidence 0000112345566778889999999988762 3579999999765332 2599
Q ss_pred HHHHHHHHHHHhcccC
Q 026656 219 WDHIKAVLMVKFHNQY 234 (235)
Q Consensus 219 ~~~i~~~~~~~~~AG~ 234 (235)
++++.+++.++++||+
T Consensus 227 ~~ei~~~~~~l~~AG~ 242 (404)
T 1jfb_A 227 KSDAVQIAFLLLVAGN 242 (404)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999995
No 25
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.83 E-value=2.3e-20 Score=147.88 Aligned_cols=185 Identities=11% Similarity=0.192 Sum_probs=130.3
Q ss_pred CCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEE----e-CC-ccEEEecCHHHHHHHH-HhcCccCCCCC
Q 026656 29 SIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLR----L-GS-VPILVVSSAKMAEEVL-KTHDLQFCSRP 101 (235)
Q Consensus 29 ~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~----~-~~-~~~v~i~d~~~i~~il-~~~~~~~~~~~ 101 (235)
..+.||||+++|+. + ..+++..+.++ ++||||++++ + ++ .++|+++||+++++|+ .++ .|++++
T Consensus 8 ~~~lppgp~~~p~~-----~-~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~--~~~~~~ 78 (406)
T 1ued_A 8 VAPLLREPANFQLR-----T-NCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHE--HFTTRP 78 (406)
T ss_dssp CCCEEECCTTTTCE-----E-TTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCS--SEECCC
T ss_pred CCCCcccCcccCCC-----C-CCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCc--cccccc
Confidence 35578999988876 3 57889999999 9999999999 6 77 8899999999999999 543 355554
Q ss_pred chhHHH-Hhh---cCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-----------------ccccccc---
Q 026656 102 ALLSQQ-KVS---YNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIG--- 157 (235)
Q Consensus 102 ~~~~~~-~~~---~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~--- 157 (235)
...... .+. ..+.++++ .+|++|+++|+++ ++.|+..+++.+.+.+. ++...+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~ 156 (406)
T 1ued_A 79 QFTQSKSGAHVEAQFVGQIST-YDPPEHTRLRKML-TPEFTVRRIRRMEPAIQSLIDDRLDLLEAEGPSADLQGLFADPV 156 (406)
T ss_dssp CC---------CGGGTTCGGG-CCTTHHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEHHHHTHHHH
T ss_pred ccccccccccccccccccccc-CCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHh
Confidence 311110 110 01345544 4699999999999 89999999988877665 0000000
Q ss_pred ------------------------cccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCC
Q 026656 158 ------------------------WVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGS 213 (235)
Q Consensus 158 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~ 213 (235)
.+.......++..++.+++.+++.++|+++++. ..+|+++.|+++. ++
T Consensus 157 ~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~-~~-- 228 (406)
T 1ued_A 157 GAHALCELLGIPRDDQREFVRRIRRNADLSRGLKARAADSAAFNRYLDNLLARQRAD-----PDDGLLGMIVRDH-GD-- 228 (406)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHH-GG--
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhc-CC--
Confidence 000000112345566778888999999988762 3479999999875 22
Q ss_pred CCCCCHHHHHHHHHHHhcccC
Q 026656 214 KVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 214 ~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.+|++++.+++.++++||+
T Consensus 229 --~ls~~ei~~~~~~l~~AG~ 247 (406)
T 1ued_A 229 --NVTDEELKGLCTALILGGV 247 (406)
T ss_dssp --GSCHHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHhh
Confidence 4999999999999999995
No 26
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.82 E-value=1.8e-19 Score=144.83 Aligned_cols=177 Identities=12% Similarity=0.171 Sum_probs=125.3
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHH-HHhh---cCCcceeecCCCHHH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQ-QKVS---YNGLDVAFAPYNAYW 125 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~g~~w 125 (235)
++.++..+.+|+++||||+++++++.+.|+++||+++++|+.+ ..|.+++..... .... ..+.|++++.+|++|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMS--TKYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTC--TTSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhh--ccccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 4567889999999999999999999999999999999999964 345554432111 1111 124566665579999
Q ss_pred HHHHHHHHHhhcchhhhhhcccchh-------------------------------------------------------
Q 026656 126 REIRKICVVHLFNSNRVQSFRPIRE------------------------------------------------------- 150 (235)
Q Consensus 126 ~~~R~~~~~~~f~~~~l~~~~~~~~------------------------------------------------------- 150 (235)
+++|+++ +++|+..+++.+.+.+.
T Consensus 87 ~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~~~~~~~~ 165 (456)
T 3mdm_A 87 HKQRRVI-DLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQ 165 (456)
T ss_dssp HHHHHHH-GGGGSHHHHHTTHHHHHHHHHHHHHHHHHTCSSSSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGTCCHHHHH
T ss_pred HHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeHHHHHHHHHHHHHHHHHcCCChhhhcccccHHHH
Confidence 9999999 89999999988877655
Q ss_pred -----------ccccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCC-CCcccHHHHHHHHhhhcCCCCCCC
Q 026656 151 -----------DYFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIK-TDQEDIVDVLLQIWKQRGSKVDIT 218 (235)
Q Consensus 151 -----------~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~d~l~~ll~~~~~~~~~~~ls 218 (235)
...|+..++.......+...++.+.+.+++.++++++++..+.+ +.+.|+++.++++.+ + .++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~~~~~~d~l~~ll~~~~-~----~~~ 240 (456)
T 3mdm_A 166 AVKLMLEGITASRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEE-G----AQD 240 (456)
T ss_dssp HHHHHHHHHHHHHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHHHTS-S----CSS
T ss_pred HHHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchhhHHHHHHHhcC-C----CCC
Confidence 00111111100011123445666778888888888887654322 345799999998752 2 488
Q ss_pred HHHHHHHHHHHhcccC
Q 026656 219 WDHIKAVLMVKFHNQY 234 (235)
Q Consensus 219 ~~~i~~~~~~~~~AG~ 234 (235)
++++.+++.++++||+
T Consensus 241 ~~~l~~~~~~l~~AG~ 256 (456)
T 3mdm_A 241 DEGLLDNFVTFFIAGH 256 (456)
T ss_dssp SHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999996
No 27
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.82 E-value=5.4e-20 Score=146.01 Aligned_cols=190 Identities=15% Similarity=0.140 Sum_probs=129.9
Q ss_pred CCCCCCCCCccccccccCCCCCChHHHHHHHHHhh-CCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCchhHHH
Q 026656 30 IALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQY-GPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ 107 (235)
Q Consensus 30 ~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~y-g~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~ 107 (235)
...+|+|+++|.+..-..+ ..+++..+.++ ++| |||+++++ ++.++|+++||+++++|+.++. +++++......
T Consensus 4 ~~~~~~~~~~P~~~~~~~~-~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~ 79 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSC-PYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFP 79 (412)
T ss_dssp ----CCCCSSCBSSCCCSS-TTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSC
T ss_pred CCCCCCCCCCCCCCCCchh-ccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCccccccc
Confidence 3467888888866433445 67899999999 788 99999997 7889999999999999997642 44443211111
Q ss_pred H-------hhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-----------------cccccccc-c---
Q 026656 108 K-------VSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIGW-V--- 159 (235)
Q Consensus 108 ~-------~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~~-~--- 159 (235)
. ....+.++++ .+|++|+++|+++ ++.|+..+++.+.+.+. ++...+.. +
T Consensus 80 ~~~~~~~~~~~~~~~l~~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~ 157 (412)
T 2zbx_A 80 ATSPRFEAVRESPQAFIG-LDPPEHGTRRRMT-ISEFTVKRIKGMRPEVEEVVHGFLDEMLAAGPTADLVSQFALPVPSM 157 (412)
T ss_dssp CCSGGGC----CCCCGGG-CCTTHHHHHHTTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHH
T ss_pred cccccccccccccccccc-CCcHHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHH
Confidence 0 0001335544 4699999999999 89999999988877665 00000000 0
Q ss_pred ------cCc-----------------chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCC
Q 026656 160 ------DNI-----------------TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVD 216 (235)
Q Consensus 160 ------~~~-----------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ 216 (235)
... ... ++..++.+.+.+++.++|+++++. ..+|+++.|+++.+++ ..
T Consensus 158 vi~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~---~~ 228 (412)
T 2zbx_A 158 VICRLLGVPYADHEFFQDASKRLVQSTDA-QSALTARNDLAGYLDGLITQFQTE-----PGAGLVGALVADQLAN---GE 228 (412)
T ss_dssp HHHHHHTCCGGGHHHHHHHHHHHHHCSSH-HHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHTTTTT---TS
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHhccCcH-HHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhcccC---CC
Confidence 000 001 344556677888899999988762 3479999999876432 36
Q ss_pred CCHHHHHHHHHHHhcccC
Q 026656 217 ITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 217 ls~~~i~~~~~~~~~AG~ 234 (235)
++++++.+++.++++||+
T Consensus 229 ls~~ei~~~~~~~~~AG~ 246 (412)
T 2zbx_A 229 IDREELISTAMLLLIAGH 246 (412)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999999999995
No 28
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.81 E-value=1.9e-19 Score=143.57 Aligned_cols=190 Identities=12% Similarity=0.105 Sum_probs=133.1
Q ss_pred cCCCCCCCCCCccccccccCCC---C-CChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCc
Q 026656 28 KSIALPPGPRGLPFIGNLHQFD---Y-SNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPA 102 (235)
Q Consensus 28 ~~~~~~pgp~~~p~~G~~~~~~---~-~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~ 102 (235)
.+.+.||| ++|++.+.. . .+++..+.++.+ ||||++++. |+.++|+++|++++++++++. ..|++++.
T Consensus 3 ~~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~ 75 (428)
T 1cpt_A 3 ARATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEG 75 (428)
T ss_dssp TTCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSS
T ss_pred cccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccc
Confidence 34567777 788866542 1 457888988876 799999987 678899999999999999754 56777654
Q ss_pred -hhH---HH-H-h---hc----CCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------
Q 026656 103 -LLS---QQ-K-V---SY----NGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------- 150 (235)
Q Consensus 103 -~~~---~~-~-~---~~----~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------- 150 (235)
... .. . + .+ .+.++++. +|++|+++|+++ +++|++.+++.+.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~-~g~~~~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~ 153 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDSLTSM-DPPTHTAYRGLT-LNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDF 153 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCCGGGC-CTTHHHHHHHHH-HTTSSHHHHGGGHHHHHHHHHHHHHHHHTSSSEEEH
T ss_pred cccCCcccccchhccccccccccccccccC-ChHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeeh
Confidence 211 11 1 2 21 12355444 699999999999 89999999988877665
Q ss_pred --------------------------------ccc----cccccc---cCc-chHHHHHHHHHHHHHHHHHHHHHHhhCc
Q 026656 151 --------------------------------DYF----PSIGWV---DNI-TGMIRRLERNFKEFDAFHQELIEEHLDP 190 (235)
Q Consensus 151 --------------------------------~~~----p~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 190 (235)
..+ |.+..+ ... ....++..++.+.+.+++.++|+++++
T Consensus 154 ~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~- 232 (428)
T 1cpt_A 154 MTDCALYYPLHVVMTALGVPEDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTVDRRS- 232 (428)
T ss_dssp HHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTTCC----------------CHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHhcccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 000 000000 000 012245667778899999999999887
Q ss_pred cCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 191 ARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 191 ~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+.++|+++.|+++..++ ..+|++++.+++.++++||+
T Consensus 233 ----~~~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~ 269 (428)
T 1cpt_A 233 ----CPKDDVMSLLANSKLDG---NYIDDKYINAYYVAIATAGH 269 (428)
T ss_dssp ----SCCSSHHHHHHHCBSSS---SBCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCCcHHHHHHhccccC---CCCCHHHHHHHHHHHHHHHH
Confidence 23579999999875432 36999999999999999995
No 29
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.81 E-value=2.1e-19 Score=142.89 Aligned_cols=186 Identities=10% Similarity=0.067 Sum_probs=129.0
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhC-CeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCch--hHHHHhhcCCcc
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYG-PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPAL--LSQQKVSYNGLD 115 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~--~~~~~~~~~~~~ 115 (235)
.|++||+..+ ..+++.++.+++++|| ||+++.+++.++|+++||++++.++ +. ..|++.+.. .....+. +..+
T Consensus 8 ~P~lG~~~~~-~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~-g~~~ 83 (417)
T 1izo_A 8 DKSLDNSLTL-LKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DT-DRFQRQNALPKRVQKSLF-GVNA 83 (417)
T ss_dssp CCCTTHHHHH-HHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CT-TTEECTTCSCHHHHTTTT-CTTC
T ss_pred CCccchHHHH-hhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-cc-cccccccccccchhhhhc-cccc
Confidence 3899999988 6788999999999998 8999998888999999999998554 33 345544321 1112222 1234
Q ss_pred eeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------------------ccc--c--------
Q 026656 116 VAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------------------------DYF--P-------- 154 (235)
Q Consensus 116 ~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------------------------~~~--p-------- 154 (235)
++ ..+|++|+++|+++ +++|++.+++.+.+.+. ..+ +
T Consensus 84 l~-~~dg~~h~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~vi~~~~G~~~~~~~~~~ 161 (417)
T 1izo_A 84 IQ-GMDGSAHIHRKMLF-LSLMTPPHQKRLAELMTEEWKAAVTRWEKADEVVLFEEAKEILCRVACYWAGVPLKETEVKE 161 (417)
T ss_dssp GG-GCCHHHHHHHHHHH-HHTSSHHHHHHHHHHHHHHHHHHHHHHTTSSEEEHHHHHHHHHHHHHHHHHTCCCCTTTHHH
T ss_pred ee-ecCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHHcCCCCCchHHHH
Confidence 54 45699999999999 89999999999887766 000 0
Q ss_pred ccc-------cccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 026656 155 SIG-------WVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLM 227 (235)
Q Consensus 155 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~ 227 (235)
+.. .+....+...+..++.+.+.+++.++|+++++..+ ...++|+++.|+++.++++ ..++++++.+++.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~~~~d~l~~ll~~~~~~g--~~l~~~~~~~~~~ 238 (417)
T 1izo_A 162 RADDFIDMVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLL-KTTSGTALHEMAFHTQEDG--SQLDSRMAAIELI 238 (417)
T ss_dssp HHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHTTSS-CCCTTSHHHHHHHCBCTTS--CBCCHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCccchhHHHHHHHHHHHHHHHHHHHHhhcc-CCCcCCHHHHHHHhccccC--CCCCHHHHHHHHH
Confidence 000 00001122344567778899999999999987532 1245799999998754322 3588988888877
Q ss_pred HHhcccC
Q 026656 228 VKFHNQY 234 (235)
Q Consensus 228 ~~~~AG~ 234 (235)
.++ ||+
T Consensus 239 ~~~-ag~ 244 (417)
T 1izo_A 239 NVL-RPI 244 (417)
T ss_dssp HHH-HHH
T ss_pred HHH-hhh
Confidence 665 663
No 30
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.80 E-value=2e-19 Score=142.91 Aligned_cols=189 Identities=13% Similarity=0.093 Sum_probs=128.4
Q ss_pred CCCCCCccccccccCCCCCChHHHHHHHHHhh-CCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchh--HHHHh
Q 026656 33 PPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQY-GPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALL--SQQKV 109 (235)
Q Consensus 33 ~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~y-g~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~--~~~~~ 109 (235)
|||| |++||+..+ ..+++.++.+++++| |||+++..++.+++++++|++++ ++.+. ..|++.+... .....
T Consensus 4 pPg~---P~iG~~~~~-~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~ 77 (415)
T 3awm_A 4 TPHT---KGPDETLSL-LADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTL 77 (415)
T ss_dssp --------CCCCHHHH-HHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTT
T ss_pred CCCC---CccchHHHH-HhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhc
Confidence 6776 889999887 678999999999999 79999998888999999999986 67544 4566543211 11122
Q ss_pred hcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------------------ccc--c--
Q 026656 110 SYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------------------------DYF--P-- 154 (235)
Q Consensus 110 ~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------------------------~~~--p-- 154 (235)
. +..+++ ..+|++|+++|+++ +++|++..++.+.+.+. ..+ |
T Consensus 78 ~-g~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~~vdl~~~~~~~~~~vi~~~~G~~~~ 154 (415)
T 3awm_A 78 L-GQGGVQ-GLDGETHRHRKQMF-MGLMTPERVRALAQLFEAEWRRAVPGWTRKGEIVFYDELHEPLTRAVCAWAGVPLP 154 (415)
T ss_dssp S-CSSSGG-GCCHHHHHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSEEEHHHHHHHHHHHHHHHHHTCCCC
T ss_pred c-CCccee-ecCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHhhccCCcEeHHHHHHHHHHHHHHHHcCCCCC
Confidence 2 124454 45699999999999 89999999998877665 000 0
Q ss_pred ------ccc-------cccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHH
Q 026656 155 ------SIG-------WVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDH 221 (235)
Q Consensus 155 ------~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~ 221 (235)
+.. .+..+.+...+..++.+++.+++.++|+++++..+ ....+|+++.|+++.++++ ..+++++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-~~~~~d~l~~ll~~~~~~g--~~~~~~~ 231 (415)
T 3awm_A 155 DDEAGNRAGELRALFDAAGSASPRHLWSRLARRRVDAWAKRIIEGIRAGSI-GSGSGTAAYAIAWHRDRHD--DLLSPHV 231 (415)
T ss_dssp GGGHHHHHHHHHHHHHSTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTSS-CCCTTSHHHHHHHCBCTTS--CBCCHHH
T ss_pred cchHHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCHHHHHHhhhhccC--CCCCHHH
Confidence 000 00111223345667788899999999999886432 1245699999998754322 3589998
Q ss_pred HHHHHHHHhcccC
Q 026656 222 IKAVLMVKFHNQY 234 (235)
Q Consensus 222 i~~~~~~~~~AG~ 234 (235)
+.+++..++ ||+
T Consensus 232 ~~~~~~~~~-ag~ 243 (415)
T 3awm_A 232 AAVELVNVL-RPT 243 (415)
T ss_dssp HHHHHHHHH-HHH
T ss_pred HHHHHHHHH-Hhh
Confidence 888887665 653
No 31
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.80 E-value=2.1e-19 Score=143.52 Aligned_cols=191 Identities=14% Similarity=0.101 Sum_probs=127.8
Q ss_pred CCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEE--------eCCccEEEecCHHHHHHHHHhcCccCCCCCc
Q 026656 31 ALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLR--------LGSVPILVVSSAKMAEEVLKTHDLQFCSRPA 102 (235)
Q Consensus 31 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~--------~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~ 102 (235)
..||.|.++++++....- ..+++..+.++ ++||||+++. +|+.++|+|+|++++++++++. ..|++++.
T Consensus 18 ~~p~~~~~~~~~~~~~~~-~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~~ 94 (433)
T 3ivy_A 18 PSPNLPPGFDFTDPAIYA-ERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYEN 94 (433)
T ss_dssp --CCCCTTCCTTCHHHHT-TCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTTT
T ss_pred CCCCCCCCCCCCCHHHhh-cCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCcc
Confidence 456666666666544332 46799999999 7799999998 4447899999999999999754 56776653
Q ss_pred hhHH--------HHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh----------------ccccc---
Q 026656 103 LLSQ--------QKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE----------------DYFPS--- 155 (235)
Q Consensus 103 ~~~~--------~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~~p~--- 155 (235)
.... ......+.+++ ..+|++|+++|+++ ++.|++..++.+.+.+. ++...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~ 172 (433)
T 3ivy_A 95 GVIPRFKNDIAREDIEVQRFVML-NMDAPHHTRLRKII-SRGFTPRAVGRLHDELQERAQKIAAEAAAAGSGDFVEQVSC 172 (433)
T ss_dssp CSCCCCCTTCCHHHHHGGGGSGG-GCCTTHHHHHHHHH-GGGSCHHHHHTTHHHHHHHHHHHHHHHHHHCEEEHHHHTTS
T ss_pred cccccccccccccccccccCCcc-ccChHHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeeHHHHHHH
Confidence 2211 11112245555 44699999999999 89999999999888776 00000
Q ss_pred ------------------------ccccc-Ccch--HHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHh
Q 026656 156 ------------------------IGWVD-NITG--MIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIW 208 (235)
Q Consensus 156 ------------------------~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~ 208 (235)
...+. ...+ ...+..++.+++.+++.++|+++++ +.++|+++.|+++.
T Consensus 173 ~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~~ 247 (433)
T 3ivy_A 173 ELPLQAIAGLLGVPQEDRGKLFHWSNEMTGNEDPEYAHIDPKASSAELIGYAMKMAEEKAK-----NPADDIVTQLIQAD 247 (433)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHTTCSCCCCGGGTTCCHHHHHHHHHHHHHHHHHHC------------CHHHHHSCC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHhccCCchhhhHHHHHHHHHHHHHHHHHHHHHhc-----CCCCcHHHHHHhhh
Confidence 00000 0000 0113557778899999999999876 34679999999876
Q ss_pred hhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 209 KQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 209 ~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.++ ..++++++.+++.++++||+
T Consensus 248 ~~~---~~ls~~ei~~~~~~ll~AG~ 270 (433)
T 3ivy_A 248 IDG---EKLSDDEFGFFVVMLAVAGN 270 (433)
T ss_dssp --C---CCCCHHHHHHHHHHHHHHSS
T ss_pred cCC---CCCCHHHHHHHHHHHHHhhh
Confidence 543 36999999999999999996
No 32
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.80 E-value=4.2e-19 Score=140.90 Aligned_cols=187 Identities=13% Similarity=0.155 Sum_probs=128.1
Q ss_pred HhhcccccCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCC
Q 026656 21 VQRYKTIKSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSR 100 (235)
Q Consensus 21 ~~~~~~~~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~ 100 (235)
+.+++..++.+.+|||+. ..+++..+.++++ |||| +.++.+.++++|++++++++.++ ..|+++
T Consensus 9 ~iyr~~~~pl~~~PGp~~-----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~ 72 (411)
T 2jjn_A 9 CCARRTLTTIDEVPGMAD-----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSD 72 (411)
T ss_dssp --------CCCSCCCSSC-----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESC
T ss_pred HhhhcccCCCCCCCCccc-----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCc
Confidence 456677888889999982 2467888999976 9998 45667899999999999999864 467777
Q ss_pred CchhHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh--------------ccc-------------
Q 026656 101 PALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE--------------DYF------------- 153 (235)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~--------------~~~------------- 153 (235)
+.... ......+.++++. +|++|+++|+.+ +++|++.+++.+.+.+. ++.
T Consensus 73 ~~~~~-~~~~~~~~~~~~~-~g~~~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~~~~~~d~~~~~~~~~~~~vi~ 149 (411)
T 2jjn_A 73 PTRVI-EGASPTPGMIHEI-DPPEHRALRKVV-SSAFTPRTISDLEPRIRDVTRSLLADAGESFDLVDVLAFPLPVTIVA 149 (411)
T ss_dssp GGGGS-TTCCCCTTCGGGC-CTTHHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHTSCSEEEHHHHTTTHHHHHHHH
T ss_pred ccccC-CcccccccccccC-CchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHHH
Confidence 54221 1111224455444 699999999999 89999998888776554 000
Q ss_pred ----------c-cccc---c------cCc-chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcC
Q 026656 154 ----------P-SIGW---V------DNI-TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRG 212 (235)
Q Consensus 154 ----------p-~~~~---~------~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~ 212 (235)
+ +..+ + .+. +...++..++.+++.+++.++|+++++ +..+|+++.|+++..++
T Consensus 150 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~d~l~~ll~~~~~~- 223 (411)
T 2jjn_A 150 ELLGLPPMDHEQFGDWSGALVDIQMDDPTDPALAERIADVLNPLTAYLKARCAERRA-----DPGDDLISRLVLAEVDG- 223 (411)
T ss_dssp HHHTCCSCCCSTTCCHHHHHHHSCCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHCCBTT-
T ss_pred HHcCCCHHHHHHHHHHHHHHHhccCccccchHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHhcccCC-
Confidence 0 0000 0 001 123355677788899999999999876 23579999999875432
Q ss_pred CCCCCCHHHHHHHHHHHhcccC
Q 026656 213 SKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 213 ~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
..+|++++.+++.++++||+
T Consensus 224 --~~l~~~el~~~~~~~~~AG~ 243 (411)
T 2jjn_A 224 --RALDDEEAANFSTALLLAGH 243 (411)
T ss_dssp --BCCCHHHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHhhh
Confidence 35999999999999999995
No 33
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.80 E-value=7e-19 Score=140.04 Aligned_cols=173 Identities=11% Similarity=0.065 Sum_probs=125.7
Q ss_pred CCChHHHHHHHHHhhC-CeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHH
Q 026656 50 YSNPQNYFWRLSKQYG-PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREI 128 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 128 (235)
..+++.++.++++++| ||+++..++ +.++|+||+++++|++ +...|++++...........+.+++ ..+|++|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~-~~dg~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYR-SPERFSSRVIWVPREAGEAYDMVPT-KLDPPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHT-CTTTEETTCCSSSHHHHHHCCCTTT-TCCTTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHc-ChhhccCCcccCCcccccccccCCc-cCCcHHHHHH
Confidence 3688999999987655 899997765 5899999999999995 4467777653221111111234444 4469999999
Q ss_pred HHHHHHhhcchhhhhhcccchh-------------------------------------------ccccccccc----c-
Q 026656 129 RKICVVHLFNSNRVQSFRPIRE-------------------------------------------DYFPSIGWV----D- 160 (235)
Q Consensus 129 R~~~~~~~f~~~~l~~~~~~~~-------------------------------------------~~~p~~~~~----~- 160 (235)
|+++ ++.|++.+++.+.+.+. .+..+...+ .
T Consensus 114 R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 192 (421)
T 3lxh_A 114 RKAI-DKGLNLAEIRKLEDQIRTIAVEIIEGFADRGHCEFGSEFSTVFPVRVFLALAGLPVEDATKLGLLANEMTRPSGN 192 (421)
T ss_dssp HHHH-HHHHSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCCCS
T ss_pred HHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhccccC
Confidence 9999 89999999999887766 000000000 0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 161 NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.+....++..++.+.+.+++.+.|+++++. ..+|+++.|+++..++ ..++++++.+++.++++||+
T Consensus 193 ~p~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~ 258 (421)
T 3lxh_A 193 TPEEQGRSLEAANKGFFEYVAPIIAARRGG-----SGTDLITRILNVEIDG---KPMPDDRALGLVSLLLLGGL 258 (421)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-----CCCSHHHHHHTSCBTT---BCCCHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhhhccC---CCCCHHHHHHHHHHHHHHhH
Confidence 011224667788899999999999999873 5679999999875533 36999999999999999995
No 34
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.79 E-value=8.5e-20 Score=147.98 Aligned_cols=116 Identities=15% Similarity=0.202 Sum_probs=86.1
Q ss_pred ccCCCCCCCCCC-ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCc-cCCCCCchh
Q 026656 27 IKSIALPPGPRG-LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDL-QFCSRPALL 104 (235)
Q Consensus 27 ~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~-~~~~~~~~~ 104 (235)
+...+.||||++ +|++||+..+ ..+++..+.+++++||+++++++++.++++++||+++++++.++.. .+.+... .
T Consensus 9 ~~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~-~ 86 (491)
T 3dax_A 9 RRQTGEPPLENGLIPYLGCALQF-GANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF-A 86 (491)
T ss_dssp CCCTTCCCEEEEEESCTTTTGGG-TCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHH-H
T ss_pred ccCCCCCCcCCCcccchhhHHHH-hhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHH-H
Confidence 344567899988 8999999988 6788999999999999999999999999999999999999975542 2222111 1
Q ss_pred HHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhccc
Q 026656 105 SQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRP 147 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~ 147 (235)
...... +.+++...+|+.|+++|+.+ .+.|+..+++.+.+
T Consensus 87 ~~~~~~--g~~~~~~~~g~~w~~~r~~~-~~~f~~~~l~~~~~ 126 (491)
T 3dax_A 87 TSAKAF--GHRSIDPMDGNTTENINDTF-IKTLQGHALNSLTE 126 (491)
T ss_dssp HHHHHH--TCCCCCGGGTSBCCCHHHHH-HHHHSHHHHHHHHH
T ss_pred HHHHHc--CCCcccccchhHHHHHHHHH-HHhcCcccHHHHHH
Confidence 111222 44544233588999999998 68888877765543
No 35
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.79 E-value=4e-18 Score=134.99 Aligned_cols=170 Identities=15% Similarity=0.171 Sum_probs=124.1
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchh------HHHHhhcCCcceeecCCCH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALL------SQQKVSYNGLDVAFAPYNA 123 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~ 123 (235)
..+++..+.++ ++||||++++.++.++|+++||+++++++.++ ..|++++... ...... +.++++. +|+
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~-~g~ 86 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQ--NQMMLFQ-NQP 86 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHH--HTSGGGC-CTT
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhh--hcchhhc-CCc
Confidence 46788899888 57999999999999999999999999999876 5777765311 111112 4566444 699
Q ss_pred HHHHHHHHHHHhhcchhhhhhcccchh----------------c---------------------------ccccccc--
Q 026656 124 YWREIRKICVVHLFNSNRVQSFRPIRE----------------D---------------------------YFPSIGW-- 158 (235)
Q Consensus 124 ~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~---------------------------~~p~~~~-- 158 (235)
+|+++|+++ +++|++.+++.+.+.+. + +..+...
T Consensus 87 ~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 165 (404)
T 3ejb_B 87 DHRRLRTLA-SGAFTPRTTESYQPYIIETVHHLLDQVQGKKKMEVISDFAFPLASFVIANIIGVPEEDREQLKEWAASLI 165 (404)
T ss_dssp HHHHHHHHH-HGGGSHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 999999999 89999999999888766 0 0000000
Q ss_pred --cc--CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 159 --VD--NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 159 --~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+. ......++..++.+.+.+++.+.|+++++ +.++|+++.|+ +..++ ..++++++.+++.++++||+
T Consensus 166 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~d~l~~ll-~~~~~---~~ls~~el~~~~~~l~~AG~ 236 (404)
T 3ejb_B 166 QTIDFTRSRKALTEGNIMAVQAMAYFKELIQKRKR-----HPQQDMISMLL-KGREK---DKLTEEEAASTCILLAIAGH 236 (404)
T ss_dssp GGGSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHH-HC-------CCCHHHHHHHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCcchHHHHHH-hcccC---CCCCHHHHHHHHHHHHHcch
Confidence 00 01113355667788899999999998875 34579999999 44332 35999999999999999995
No 36
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.78 E-value=5.4e-19 Score=139.06 Aligned_cols=171 Identities=12% Similarity=0.162 Sum_probs=121.8
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCC----ccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGS----VPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYW 125 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~----~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w 125 (235)
..+++..+.++ ++||||++++.++ .++|+++||++++++++ +...|++++.......... ..+.++..+|++|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRAL-LPGILQAYDPPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----CC-CTTCGGGCCTTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccccc-cccccccCCChhH
Confidence 57889999999 5899999998876 78999999999999995 4467887765432222111 2333455579999
Q ss_pred HHHHHHHHHhhcchhhhhhcccchh-----------------cccccccc---------cc-Cc----------------
Q 026656 126 REIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIGW---------VD-NI---------------- 162 (235)
Q Consensus 126 ~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~~---------~~-~~---------------- 162 (235)
+++|+.+ +++|++.+++.+.+.+. ++...+.. ++ ..
T Consensus 88 ~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~ 166 (384)
T 3oo3_A 88 TRLRRTV-APAYSARRMERLRPRIEEIVEECLDDFESVGAPVDFVRHAAWPIPAYIACEFLGVPRDDQAELSRMIRESRE 166 (384)
T ss_dssp HHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHSCSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhc
Confidence 9999999 89999999998887766 11110000 00 00
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 163 TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
....++..++.+++.+++.+.|+++++ +.++|+++.++++. + ..++++++.+++.++++||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~d~l~~ll~~~-~----~~l~~~~l~~~~~~~~~AG~ 228 (384)
T 3oo3_A 167 SRLPRQRTLSGLGIVNYTKRLTSGKRR-----DPGDGMIGVIVREH-G----AEISDEELAGLAEGNLIMAA 228 (384)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHHH-G----GGSCHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHhc-C----CCCCHHHHHHHHHHHHHhhH
Confidence 011234556778889999999998876 34579999999872 2 24999999999999999995
No 37
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.78 E-value=2.5e-19 Score=144.69 Aligned_cols=116 Identities=13% Similarity=0.227 Sum_probs=84.5
Q ss_pred cccCCCCCCCCCC-ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCch-
Q 026656 26 TIKSIALPPGPRG-LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPAL- 103 (235)
Q Consensus 26 ~~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~- 103 (235)
.+++.+.||||++ +|++||+..+ ..+++.++.+++++||||+++++++.++++++||+++++++.++.. ++.++..
T Consensus 13 ~~~~~~~pPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~ 90 (475)
T 3b98_A 13 RTRRRNEPPLDKGMIPWLGHALEF-GKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQ 90 (475)
T ss_dssp CCCCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHH
T ss_pred cccCCCCCCCCCCCcchHHhHHHH-hhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHH
Confidence 3445678999998 8999999987 6789999999999999999999999999999999999999976532 3332211
Q ss_pred hHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh
Q 026656 104 LSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE 150 (235)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~ 150 (235)
....... +.+++.. +|+.| |+++ .++|+..+++.+.+.+.
T Consensus 91 ~~~~~~~--g~~~~~~-~~~~~---R~~~-~~~f~~~~l~~~~~~~~ 130 (475)
T 3b98_A 91 VLMKRIF--NMILPSH-NPESE---KKRA-EMHFQGASLTQLSNSMQ 130 (475)
T ss_dssp HHHHHTT--CCCCTTC-CHHHH---HHHH-HHHTSHHHHHHHHHHHH
T ss_pred HHHHHHh--CCCCCCC-ChHHH---HHHH-HHHcChhhHHHHHHHHH
Confidence 1112222 4455433 46655 5666 78898888777665443
No 38
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.78 E-value=8.4e-19 Score=138.59 Aligned_cols=173 Identities=13% Similarity=0.102 Sum_probs=124.9
Q ss_pred CCChHHHHHHHHHhh--CCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHH
Q 026656 50 YSNPQNYFWRLSKQY--GPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWRE 127 (235)
Q Consensus 50 ~~~~~~~~~~~~~~y--g~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~ 127 (235)
..+++..+.+++++| |||+++..++ +.++++||++++++++ +...|++++.......... +...++..+|++|++
T Consensus 18 ~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~ 94 (398)
T 4fb2_A 18 DGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETGE-FELMMAGQDDPVHKK 94 (398)
T ss_dssp TSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC-----CCCTTTTCCTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCcc-cccCcccCCchHHHH
Confidence 578999999999999 9999998875 5899999999999995 4557776654322111111 222334456999999
Q ss_pred HHHHHHHhhcchhhhhhcccchh----------------cccccc-cc---------ccCc----------------chH
Q 026656 128 IRKICVVHLFNSNRVQSFRPIRE----------------DYFPSI-GW---------VDNI----------------TGM 165 (235)
Q Consensus 128 ~R~~~~~~~f~~~~l~~~~~~~~----------------~~~p~~-~~---------~~~~----------------~~~ 165 (235)
+|+++ ++.|++.+++.+.+.+. +....+ .. +... ...
T Consensus 95 ~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~ 173 (398)
T 4fb2_A 95 YRQLV-AKPFSPEATDLFTEQLRQSTNDLIDARIELGEGDAATWLANEIPARLTAILLGLPPEDGDTYRRWVWAITHVEN 173 (398)
T ss_dssp HHHHH-HTTTCHHHHHTTHHHHHHHHHHHHHTTTTTTEEEHCCCCCTTHHHHHHHHHTTSCGGGHHHHHHHHHHHHHCCC
T ss_pred HHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCC
Confidence 99999 89999999999888776 111111 00 0000 001
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 166 IRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
..+..++.+.+.+++.+.|+++++ +.++|+++.|+++..++ ..++++++.+++.++++||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~l~~AG~ 234 (398)
T 4fb2_A 174 PEEGAEIFAELVAHARTLIAERRT-----NPGNDIMSRVIMSKIDG---ESLSEDDLIGFFTILLLGGI 234 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHCCBTT---BCCCHHHHHHHHHHCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHcccCC---CCCCHHHHHHHHHHHHHHhh
Confidence 124566778889999999999887 34579999999876533 35999999999999999996
No 39
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.77 E-value=5.5e-19 Score=140.08 Aligned_cols=175 Identities=13% Similarity=0.188 Sum_probs=119.3
Q ss_pred cCCCCCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCc---hh----HHHHhhcCCccee
Q 026656 46 HQFDYSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPA---LL----SQQKVSYNGLDVA 117 (235)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~---~~----~~~~~~~~~~~~~ 117 (235)
..+ ..+++..+.++ ++||||+++++ ++.++|+++||+++++++.++. +++++. .. ........+.+++
T Consensus 20 ~~~-~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (408)
T 3abb_A 20 RTC-PYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLI 95 (408)
T ss_dssp CSS-TTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTT
T ss_pred ccc-ccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccc
Confidence 344 57889999999 89999999997 7889999999999999997642 444332 11 1110000123554
Q ss_pred ecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-----------------cccccccc-c--------c-Ccch---HH-
Q 026656 118 FAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIGW-V--------D-NITG---MI- 166 (235)
Q Consensus 118 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~~-~--------~-~~~~---~~- 166 (235)
+ .+|++|+++|+++ ++.|+..+++.+.+.+. ++...+.. + + .... ..
T Consensus 96 ~-~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~ 173 (408)
T 3abb_A 96 G-VDDPVHARQRRML-IPSFGVKRMNAIRPRLQSLVDRLLDDMLAKGPGADLVSAFALPVPSVAICELLGVPYGDHDFFE 173 (408)
T ss_dssp T-CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHH
T ss_pred c-CCchHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 4 4699999999999 89999999988877665 11111100 0 0 0000 00
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 167 ------------RRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 167 ------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
++..++.+.+.+++.++|+++++. ..+|+++.|+++.+++ ..+|++++.+++.++++||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~ 245 (408)
T 3abb_A 174 ECSRNFVGAATSAEADAAFGELYTYLHGLVGRKQAE-----PEDGLLDELIARQLEE---GDLDHDEVVMIALVLLVAGH 245 (408)
T ss_dssp HHHHHHC------CCSSHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHHHTS---SSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhcccCC---CCCCHHHHHHHHHHHHHHHH
Confidence 112234567888889999888762 3479999999876532 36999999999999999995
No 40
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.77 E-value=1.6e-18 Score=137.82 Aligned_cols=172 Identities=12% Similarity=0.143 Sum_probs=125.1
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhh-------cCCcceeecCC
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVS-------YNGLDVAFAPY 121 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 121 (235)
..+++..+.+++++ |||++++++ |.++|+++||+++++++.++ .|++++......... ..+.++++. +
T Consensus 28 ~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-d 103 (417)
T 3tyw_A 28 PFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRT-D 103 (417)
T ss_dssp TTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGC-C
T ss_pred ccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhc-C
Confidence 57899999999988 999999986 58999999999999999865 566643211111100 124455444 6
Q ss_pred CHHHHHHHHHHHHhhcchhhhhhcccchh-----------------cccccc-c--------------------------
Q 026656 122 NAYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSI-G-------------------------- 157 (235)
Q Consensus 122 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~-~-------------------------- 157 (235)
|++|+++|+++ +++|++.+++.+.+.+. ++...+ .
T Consensus 104 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~ 182 (417)
T 3tyw_A 104 APEHTRYRRML-LPAFTVRRVRAMRPAVQARVDEILDGMLAAGGPVDLVSAYANAVSTSVICELLGIPRHDLEFFRDVTR 182 (417)
T ss_dssp HHHHHHHHHHH-GGGGCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTHHHHHHHHHHHHHTCCTTTTTHHHHHHH
T ss_pred CcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999999 89999999998887776 011100 0
Q ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 158 WVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.+.......++..++.+.+.+++.++|+++++ +..+|+++.++++..+++ .++++++.+++.++++||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~-----~~~~d~l~~ll~~~~~~~---~ls~~el~~~~~~l~~AG~ 251 (417)
T 3tyw_A 183 ISGSRNSTAEQVSEALGGLFGLLGGLVAERRE-----EPRDDLISKLVTDHLVPG---NVTTEQLLSTLGITINAGR 251 (417)
T ss_dssp HHHSSSSCTTHHHHHHHHHHHHHHHHHHHHHS-----SCCSSHHHHHHHHTTTTT---SSCHHHHHHHHHHHHHHHH
T ss_pred HHhcccCCHHHHHHHHHHHHHHHHHHHHHHhh-----CCCCCHHHHHHHhcccCC---CCCHHHHHHHHHHHHhhhH
Confidence 00000011234567778899999999999987 345799999998866543 5999999999999999995
No 41
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.77 E-value=5.6e-19 Score=139.93 Aligned_cols=185 Identities=17% Similarity=0.142 Sum_probs=128.1
Q ss_pred CCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEe-CCcc-EEEecCHHHHHHHHHhcCccCCCCCchhHHH-
Q 026656 31 ALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRL-GSVP-ILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ- 107 (235)
Q Consensus 31 ~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~-~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~- 107 (235)
+.+|+|+.+|+.++ + ..+++.++.+++ +||||+++++ ++.+ .|+++||+++++|+.+ ..|++++......
T Consensus 8 ~~~~~~~~~p~~~~---~-~~~p~~~~~~l~-~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~ 80 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---P-GSDFDPVLTELM-REGPVTRISLPNGEGWAWLVTRHDDVRLVTND--PRFGREAVMDRQVT 80 (406)
T ss_dssp CCSCCEEECCCCCC---C-TTCCCHHHHHHH-HHCSEEEEECSBSBSCEEEECSHHHHHHHHTC--TTEESTTTTTTTBC
T ss_pred hhccCCCCCCCCcc---c-ccCchHHHHHHH-hcCCeeeeccCCCcccEEEEcCHHHHHHHHcC--CCccCCcCCCCCcc
Confidence 55688887887766 3 578899999985 7999999986 5666 9999999999999975 3576664321111
Q ss_pred ---H-hhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-----------------cccccc-ccc------
Q 026656 108 ---K-VSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSI-GWV------ 159 (235)
Q Consensus 108 ---~-~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~-~~~------ 159 (235)
. ....+.++++. +|++|+++|+++ ++.|++.+++.+.+.+. ++...+ ..+
T Consensus 81 ~~~~~~~~~~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~ 158 (406)
T 1s1f_A 81 RLAPHFIPARGAVGFL-DPPDHTRLRRSV-AAAFTARGVERVRERSRGMLDELVDAMLRAGPPADLTEAVLSPFPIAVIC 158 (406)
T ss_dssp BSSSSCSSCTTSGGGC-CTTHHHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTHHHHHHHH
T ss_pred cccccccccccccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhhHhHHHHHH
Confidence 1 11124566554 699999999999 89999999988877665 111000 000
Q ss_pred ---cCcch---HH--------------HHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCH
Q 026656 160 ---DNITG---MI--------------RRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITW 219 (235)
Q Consensus 160 ---~~~~~---~~--------------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~ 219 (235)
..... .. ++..++.+.+.+++.++|+++++ +..+|+++.|+++.++ ..+|+
T Consensus 159 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~d~l~~ll~~~~~----~~ls~ 229 (406)
T 1s1f_A 159 ELMGVPATDRHSMHTWTQLILSSSHGAEVSERAKNEMNAYFSDLIGLRSD-----SAGEDVTSLLGAAVGR----DEITL 229 (406)
T ss_dssp HHHTCCGGGHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHHHHHTSCC-----SCCCSHHHHHHHHHHT----TSSCH
T ss_pred HHhCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHhhcc----cCCCH
Confidence 00000 00 01234455677888888888776 2356999999987543 25999
Q ss_pred HHHHHHHHHHhccc
Q 026656 220 DHIKAVLMVKFHNQ 233 (235)
Q Consensus 220 ~~i~~~~~~~~~AG 233 (235)
+++.+++.++++||
T Consensus 230 ~el~~~~~~l~~AG 243 (406)
T 1s1f_A 230 SEAVGLAVLLQIGG 243 (406)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999998
No 42
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.76 E-value=8.3e-18 Score=133.48 Aligned_cols=188 Identities=18% Similarity=0.180 Sum_probs=127.2
Q ss_pred cCCCCCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCchhH-
Q 026656 28 KSIALPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPALLS- 105 (235)
Q Consensus 28 ~~~~~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~- 105 (235)
++....+||.. |+ . ..+ ..+++..+.++. +||||+++++ ++.++|+++||+++++++.++ .|++++....
T Consensus 4 ~~~~~~~g~~~-~~-~--~~~-~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~ 75 (413)
T 2z36_A 4 NVADELAGLEL-PV-E--RGC-PFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGF 75 (413)
T ss_dssp ------CCCEE-CC-C--CCB-TTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTC
T ss_pred cHHHHhccccC-CC-C--ccc-ccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCc
Confidence 34445577752 43 1 234 568899999997 7899999997 788999999999999999863 5666542211
Q ss_pred -----HHHhhc---CCcc-eeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh------------------ccccccc-
Q 026656 106 -----QQKVSY---NGLD-VAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE------------------DYFPSIG- 157 (235)
Q Consensus 106 -----~~~~~~---~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~------------------~~~p~~~- 157 (235)
...... .+.+ +++. +|+.|+++|+++ +++|++.+++.+.+.+. ++...+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~d~~~~~~~ 153 (413)
T 2z36_A 76 PLFTLDAATLQQLRSQPPLMLGM-DGAEHSAARRPV-IGEFTVKRLAALRPRIQDIVDHFIDDMLATDQRPVDLVQALSL 153 (413)
T ss_dssp CCSSCCHHHHHHHTTSCCCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTCSCSSEEHHHHTTT
T ss_pred ccccccccccccccccccccccc-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHhh
Confidence 011110 2456 5444 699999999999 89999999888877665 0000000
Q ss_pred cc---------c-----------------CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhc
Q 026656 158 WV---------D-----------------NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQR 211 (235)
Q Consensus 158 ~~---------~-----------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~ 211 (235)
.+ . ..... ++..++.+.+.+++.++|+++++. ..+|+++.|+++.+++
T Consensus 154 ~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~ 227 (413)
T 2z36_A 154 PVPSLVICELLGVPYTDHDFFQSRTTMMVSRTSM-EDRRRAFAELRAYIDDLITRKESE-----PGDDLFSRQIARQRQE 227 (413)
T ss_dssp HHHHHHHHHHHTCCGGGHHHHHHHHHHTTCSSCH-HHHHHHHHHHHHHHHHHHHHHHSS-----CCSSHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHhcccCc-HHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhhcCC
Confidence 00 0 00000 345566778889999999998872 3569999999875443
Q ss_pred CCCCCCCHHHHHHHHHHHhcccC
Q 026656 212 GSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 212 ~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
..+|++++.+++.++++||+
T Consensus 228 ---~~ls~~ei~~~~~~l~~AG~ 247 (413)
T 2z36_A 228 ---GTLDHAGLVSLAFLLLTAGH 247 (413)
T ss_dssp ---SCCCHHHHHHHHHHHHHHHS
T ss_pred ---CCCCHHHHHHHHHHHHhcch
Confidence 25999999999999999996
No 43
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.76 E-value=2e-18 Score=138.48 Aligned_cols=170 Identities=12% Similarity=0.066 Sum_probs=121.8
Q ss_pred hHHHHHHHHHhhCCeE--EEE-eCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHH---------Hhh-c---CCcce
Q 026656 53 PQNYFWRLSKQYGPMV--SLR-LGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ---------KVS-Y---NGLDV 116 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~--~~~-~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~---------~~~-~---~~~~~ 116 (235)
++..+.++ ++||||+ ++. .++.++|+|++++++++++++. ..|++++...... ... + .+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 78888888 6789999 887 6778999999999999999765 6677765422100 011 0 12345
Q ss_pred eecCCCHHHHHHHHHHHHhhcchhhhhhcccchh----------------------------------------------
Q 026656 117 AFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE---------------------------------------------- 150 (235)
Q Consensus 117 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~---------------------------------------------- 150 (235)
+ ..+|++|+++|+++ +++|++.+++.+.+.+.
T Consensus 125 ~-~~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~ 202 (450)
T 3tkt_A 125 V-QMDAPKHPKLRRLT-QDWFMPKNLARLDGEIRKIANEAIDRMLGAGEEGDFMALVAAPYPLHVVMQILGVPPEDEPKM 202 (450)
T ss_dssp G-GCCTTHHHHHHHHH-HTTTSHHHHGGGHHHHHHHHHHHHHHHHHTCSEEEHHHHTTTHHHHHHHHHHTTCCGGGHHHH
T ss_pred c-cCCCHHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeeHHHHHHHHHHHHHHHHcCCChhHHHHH
Confidence 4 44699999999999 89999999999887766
Q ss_pred -----ccc--------cccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCC
Q 026656 151 -----DYF--------PSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDI 217 (235)
Q Consensus 151 -----~~~--------p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~l 217 (235)
.++ ++..++.......++..++.+++.+++.++|+++++ +.++|+++.|+++..++ ..+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~~~~~---~~l 274 (450)
T 3tkt_A 203 LFLTQQMFGGQDEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRR-----NPTDDVATVIANAVVDG---EPM 274 (450)
T ss_dssp HHHHHTTSCCC----------------HHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHTCEETT---EEC
T ss_pred HHHHHHHhccccchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHhccccC---CCC
Confidence 000 000000000112356677788899999999999887 24579999999876432 359
Q ss_pred CHHHHHHHHHHHhcccC
Q 026656 218 TWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 218 s~~~i~~~~~~~~~AG~ 234 (235)
|++++.+++.++++||+
T Consensus 275 s~~ei~~~~~~l~~AG~ 291 (450)
T 3tkt_A 275 SDRDTAGYYIITASAGH 291 (450)
T ss_dssp CHHHHHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 99999999999999996
No 44
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.76 E-value=1.5e-18 Score=140.94 Aligned_cols=112 Identities=11% Similarity=0.182 Sum_probs=80.5
Q ss_pred ccCCCCCCCCCC-ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCch-h
Q 026656 27 IKSIALPPGPRG-LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPAL-L 104 (235)
Q Consensus 27 ~~~~~~~pgp~~-~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~-~ 104 (235)
++..+.||||++ +|++||+..+ ..+++.++.+++++|||+|++++++.++++++||+++++++.++...++.++.. .
T Consensus 14 ~~~~~~PPgp~~~~P~iG~~~~~-~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~ 92 (498)
T 3b6h_A 14 TRRPGEPPLDLGSIPWLGYALDF-GKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIF 92 (498)
T ss_dssp CCCTTCCCEECCSSTTTBTHHHH-HHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHH
T ss_pred ccCCCCCCCCCCCCcchhhHHHh-ccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHH
Confidence 445578999988 8999999888 567899999999999999999999999999999999999997655323333221 1
Q ss_pred HHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcc
Q 026656 105 SQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFR 146 (235)
Q Consensus 105 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~ 146 (235)
...... +.+++. .+|+.| |+.. .+.|+...++.+.
T Consensus 93 ~~~~~~--g~~~~~-~~~~~~---rr~~-~~~~~~~~l~~~~ 127 (498)
T 3b6h_A 93 LMERIF--DVQLPH-YSPSDE---KARM-KLTLLHRELQALT 127 (498)
T ss_dssp HHHHTS--CCCCTT-CCHHHH---HHHH-HTTSSHHHHHHHH
T ss_pred HHHHHc--CCCccc-cCHHHH---HHHH-HHhhchHhHHHHH
Confidence 112222 445543 346766 4455 5677776665553
No 45
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.75 E-value=8.9e-19 Score=140.15 Aligned_cols=170 Identities=15% Similarity=0.152 Sum_probs=110.0
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHHH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIR 129 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 129 (235)
..+++.++.++ ++||||+++..++ .|+++||+++++|+.++. .|++++......... +.+.++..+|++|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~--~~~~l~~~dg~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPD-IFTTKSLVERAEPVM--RGPVLAQMHGKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTT-TEECCCTTSCCCCSC--C-------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCcc-ccccccccccccccc--CCCccccCCcHHHHHHH
Confidence 35778888877 6799999986544 899999999999998764 477665432222222 33333445699999999
Q ss_pred HHHHHhhcchhhhhhcccchh----------------cccccc---------------------------ccc-------
Q 026656 130 KICVVHLFNSNRVQSFRPIRE----------------DYFPSI---------------------------GWV------- 159 (235)
Q Consensus 130 ~~~~~~~f~~~~l~~~~~~~~----------------~~~p~~---------------------------~~~------- 159 (235)
+++ +++|++..++.+.+.+. ++...+ ..+
T Consensus 126 r~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~~~~~~~ 204 (441)
T 3nc3_A 126 RIV-VRSFIGDALDHLSPLIKQNAENLLAPYLERGKSDLVNDFGKTFAVCVTMDMLGLDKRDHEKISEWHSGVADFITSI 204 (441)
T ss_dssp HHH-HHHHHHTHHHHHHHHHHHHHHHHHTTTTTTTEEECCCCCHHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHHHHCS
T ss_pred HHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccc
Confidence 999 89999999999888766 000000 000
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 160 DNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
........+..++.+++.+++.++|+++++ +..+|+++.|+++..++ ..+|++++.+++.++++||+
T Consensus 205 ~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----~~~~Dll~~Ll~~~~~~---~~ls~~el~~~~~~ll~AG~ 271 (441)
T 3nc3_A 205 SQSPEARAHSLWCSEQLSQYLMPVIKERRV-----NPGSDLISILCTSEYEG---MALSDKDILALILNVLLAAT 271 (441)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SCCSSHHHHHCC---------CCCHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHhhccC---CCCCHHHHHHHHHHHHHhhh
Confidence 001112344566778889999999999876 34579999999876533 36999999999999999995
No 46
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.75 E-value=1.9e-17 Score=131.66 Aligned_cols=170 Identities=16% Similarity=0.201 Sum_probs=122.1
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhh--------cCCcceeecCC
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVS--------YNGLDVAFAPY 121 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 121 (235)
..+++.++.++ ++||||+++..+ .|+++||+++++++++. ..+++++......... ..+.++++. +
T Consensus 28 ~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-d 101 (418)
T 3r9b_A 28 RADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFL-D 101 (418)
T ss_dssp TTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGC-C
T ss_pred ccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhc-C
Confidence 67899999998 578999987654 89999999999999764 4455555332222211 124555544 5
Q ss_pred CHHHHHHHHHHHHhhcchhhhhhcccchh-------c--------cc------------------c---------c----
Q 026656 122 NAYWREIRKICVVHLFNSNRVQSFRPIRE-------D--------YF------------------P---------S---- 155 (235)
Q Consensus 122 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------~--------~~------------------p---------~---- 155 (235)
|++|+++|+++ ++.|++.+++.+.+.+. + .. | +
T Consensus 102 g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~ 180 (418)
T 3r9b_A 102 PPDHTRLRGLV-SKAFAPRVIKRLEPEITALVDQLLDAVDGPEFNLIDNLAYPLPVAVICRLLGVPIEDEPKFSRASALL 180 (418)
T ss_dssp TTHHHHHHHHH-HGGGSHHHHGGGHHHHHHHHHHHHHTCCSSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH
T ss_pred CchHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHhhhccCCeehHHHHhCcCCHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 99999999999 89999999988877654 0 00 0 0
Q ss_pred ---cccc----cCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHH
Q 026656 156 ---IGWV----DNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMV 228 (235)
Q Consensus 156 ---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~ 228 (235)
+... .......++..++.+.+.+++.++|+++++ +..+|+++.|+++..+++ .+|++++.+++.+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~-----~~~~d~l~~ll~~~~~~~---~ls~~ei~~~~~~ 252 (418)
T 3r9b_A 181 AAALDPFLALTGETSDLFDEQMKAGMWLRDYLRALIDERRR-----TPGEDLMSGLVAVEESGD---QLTEDEIIATCNL 252 (418)
T ss_dssp HHTTSCHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHHHTTT-----SCCSSHHHHHHHHHHHSS---SCCHHHHHHHHHH
T ss_pred HhhcCccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCccHHHHHHHhhhccC---CCCHHHHHHHHHH
Confidence 0000 001123356777888899999999999887 346799999998855443 5999999999999
Q ss_pred HhcccC
Q 026656 229 KFHNQY 234 (235)
Q Consensus 229 ~~~AG~ 234 (235)
+++||+
T Consensus 253 l~~AG~ 258 (418)
T 3r9b_A 253 LLIAGH 258 (418)
T ss_dssp HHHHHH
T ss_pred HHHHhH
Confidence 999995
No 47
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.75 E-value=3.7e-18 Score=135.13 Aligned_cols=172 Identities=12% Similarity=0.108 Sum_probs=121.9
Q ss_pred CCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCc--h-hHHHHhh--cCCcceeecCCCH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPA--L-LSQQKVS--YNGLDVAFAPYNA 123 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~--~-~~~~~~~--~~~~~~~~~~~g~ 123 (235)
..+++..+.++ ++||||+++++ ++.+.|+++||+++++++.++ .|++++. . .....+. ..+.++++ .+|+
T Consensus 18 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~ 93 (403)
T 3aba_A 18 PFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKPGRGSLLW-QDEP 93 (403)
T ss_dssp TTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCCCTTCCTT-CCTT
T ss_pred ccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccc-CCch
Confidence 56788889999 89999999997 788999999999999999864 4666532 1 1100011 12455544 4699
Q ss_pred HHHHHHHHHHHhhcchhhhhhcccchh-----------------ccccccc-cc--------------------------
Q 026656 124 YWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIG-WV-------------------------- 159 (235)
Q Consensus 124 ~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~-~~-------------------------- 159 (235)
.|+++|+++ ++.|++.+++.+.+.+. ++...+. .+
T Consensus 94 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~ 172 (403)
T 3aba_A 94 EHTSDRKLL-AKEFTVRRMQALRPNIQRIVDEHLDAIEARGGPVDLVKTFANAVPSMVISDLFGVPVERRAEFQDIAEAM 172 (403)
T ss_dssp HHHHHHHHH-HHHSCHHHHHTTHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHH
T ss_pred hHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 999999999 89999999988877665 0000000 00
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 160 DNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.......++..++.+.+.+++.++|+++++. ..+|+++.|+++.+++ ..+|++++.+++.++++||+
T Consensus 173 ~~~~~~p~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~---~~l~~~ei~~~~~~l~~AG~ 239 (403)
T 3aba_A 173 MRVDQDAAATEAAGMRLGGLLYQLVQERRAN-----PGDDLISALITTEDPD---GVVDDMFLMNAAGTLLIAAH 239 (403)
T ss_dssp SBSSSCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHTSCCTT---CCCSHHHHHHHHHHHHHHHH
T ss_pred HhccCcHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhhccCC---CCCCHHHHHHHHHHHHHHHH
Confidence 0000001345567778889999999988762 3469999999875432 36999999999999999995
No 48
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.75 E-value=6.3e-18 Score=134.21 Aligned_cols=195 Identities=11% Similarity=0.054 Sum_probs=130.6
Q ss_pred ccccCCCCCCCCCCcccc--ccccCC----CCCChHHHHHHHHHhhC--CeEEEEeCCccEEEecCHHHHHHHHHhcCcc
Q 026656 25 KTIKSIALPPGPRGLPFI--GNLHQF----DYSNPQNYFWRLSKQYG--PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQ 96 (235)
Q Consensus 25 ~~~~~~~~~pgp~~~p~~--G~~~~~----~~~~~~~~~~~~~~~yg--~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~ 96 (235)
+..++.+.||||.+.|.. +.+..+ ...+++..+.+++ +|| ||++++..+ +.|+++|++++++++.+ ...
T Consensus 5 ~~~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l~-~~G~~pv~~~~~~g-~~vvv~~~~~v~~vl~~-~~~ 81 (415)
T 2zwu_A 5 TIQSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQ-ESNVPDLVWTRCNG-GHWIATRGQLIREAYED-YRH 81 (415)
T ss_dssp ------CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGGG-STTSCSEEEECGGG-CEEEECSHHHHHHHHHC-TTT
T ss_pred cccCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHHH-hcCCCCeEEecCCC-CeEEEcCHHHHHHHHcC-ccc
Confidence 345677899999998864 433211 1457889999995 799 999998323 68999999999999974 456
Q ss_pred CCCCC-chhHHHHhhcCCcc-eeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh----------------cccccc-c
Q 026656 97 FCSRP-ALLSQQKVSYNGLD-VAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE----------------DYFPSI-G 157 (235)
Q Consensus 97 ~~~~~-~~~~~~~~~~~~~~-~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~~p~~-~ 157 (235)
|++++ ......... +.+ +++. +|+.|+++|+++ ++.|++.+++.+.+.+. ++...+ .
T Consensus 82 f~~~~~~~~~~~~~~--~~~~l~~~-~g~~~~~~R~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~ 157 (415)
T 2zwu_A 82 FSSECPFIPREAGEA--YDFIPTSM-DPPEQRQFRALA-NQVVGMPVVDKLENRIQELACSLIESLRPQGQCNFTEDYAE 157 (415)
T ss_dssp EETTSCSSSHHHHHH--CCCTTTTC-CTTTTHHHHHHH-HHHHSHHHHHHHHHHHHHHHHHHHHHHGGGTEEEHHHHTTT
T ss_pred cCCCcccCCCCcccc--ccccCccC-CCcHHHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHH
Confidence 87775 222212111 445 6544 699999999999 89999999988887666 111100 1
Q ss_pred cc---------cC-cch--HHH-------------HHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcC
Q 026656 158 WV---------DN-ITG--MIR-------------RLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRG 212 (235)
Q Consensus 158 ~~---------~~-~~~--~~~-------------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~ 212 (235)
.+ .. ... ... +..++.+++.+++.++|+++++ +.++|+++.|+++..++
T Consensus 158 ~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~~~~~- 231 (415)
T 2zwu_A 158 PFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQ-----KPGTDAISIVANGQVNG- 231 (415)
T ss_dssp HHHHHHHHHHHTCCGGGHHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHTCEETT-
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHhhhcC-
Confidence 00 00 000 000 2345567788899999998876 23579999999774322
Q ss_pred CCCCCCHHHHHHHHHHHhcccC
Q 026656 213 SKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 213 ~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
..++++++.+++.++++||+
T Consensus 232 --~~l~~~~i~~~~~~l~~AG~ 251 (415)
T 2zwu_A 232 --RPITSDEAKRMCGLLLVGGL 251 (415)
T ss_dssp --EECCHHHHHHHHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHHhH
Confidence 35999999999999999995
No 49
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.75 E-value=5.5e-18 Score=134.40 Aligned_cols=173 Identities=12% Similarity=0.140 Sum_probs=123.5
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHH-----HHhhcCCcceeecCCCHH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQ-----QKVSYNGLDVAFAPYNAY 124 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~ 124 (235)
..+++..+.++ ++||||+++++++.+.|+++||+++++++.++. |++++..... ......+.++++ .+|+.
T Consensus 19 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~ 94 (411)
T 3a4g_A 19 WQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMIL-MDPPD 94 (411)
T ss_dssp TTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGG-CCTTH
T ss_pred hcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCccccccccc-CCchH
Confidence 57889999999 899999999999889999999999999998653 7776532211 111112455544 46999
Q ss_pred HHHHHHHHHHhhcchhhhhhcccchh----------------cccc-ccccc---------cCcch---HH---------
Q 026656 125 WREIRKICVVHLFNSNRVQSFRPIRE----------------DYFP-SIGWV---------DNITG---MI--------- 166 (235)
Q Consensus 125 w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~~p-~~~~~---------~~~~~---~~--------- 166 (235)
|+++|+++ ++.|++.+++.+.+.+. ++.. +...+ ..... ..
T Consensus 95 h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~ 173 (411)
T 3a4g_A 95 HTRLRKLV-GRSFTVRRMNELEPRITEIADGLLAGLPTDGPVDLMREYAFQIPVQVICELLGVPAEDRDDFSAWSSVLVD 173 (411)
T ss_dssp HHHHHHHH-HTTCCHHHHHHHHHHHHHHHHHHHHHSCSSSCEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHHTT
T ss_pred HHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHhc
Confidence 99999999 89999999998887766 1110 00000 00000 00
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 167 ----RRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 167 ----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
++..++.+.+.+++.++|+++++. .++|+++.|+++.+++ +..+|++++.+++.++++||+
T Consensus 174 ~~p~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~--~~~ls~~ei~~~~~~l~~AG~ 238 (411)
T 3a4g_A 174 DSPADDKNAAMGKLHGYLSDLLERKRTE-----PDDALLSSLLAVSDED--GDRLSQEELVAMAMLLLIAGH 238 (411)
T ss_dssp SSCTTTHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHCCCTT--CCCCCHHHHHHHHHHHHHHHS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhhccC--CCCCCHHHHHHHHHHHHHhch
Confidence 123456677888999999988762 3469999999875411 236999999999999999996
No 50
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.75 E-value=1.2e-18 Score=137.64 Aligned_cols=172 Identities=11% Similarity=0.043 Sum_probs=123.2
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHHH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIR 129 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 129 (235)
..+++..+.+++++ |||+++..++ +.++++||+++++++++. +.|++++...........+.++ +..+|++|+++|
T Consensus 23 ~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~-~~~~g~~h~~~R 98 (396)
T 3oft_A 23 EQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIP-LQQDGAEHKAFR 98 (396)
T ss_dssp TTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTT-TTCCHHHHHHHH
T ss_pred hcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCc-cccCCcHHHHHH
Confidence 57899999999998 9999998764 589999999999999654 5677765321111111113344 445699999999
Q ss_pred HHHHHhhcchhhhhhcccchh----------------cccccc-c---------cccCc----------------chHHH
Q 026656 130 KICVVHLFNSNRVQSFRPIRE----------------DYFPSI-G---------WVDNI----------------TGMIR 167 (235)
Q Consensus 130 ~~~~~~~f~~~~l~~~~~~~~----------------~~~p~~-~---------~~~~~----------------~~~~~ 167 (235)
+.+ +++|++.+++.+.+.+. +....+ . .+... ....+
T Consensus 99 ~~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~v~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 177 (396)
T 3oft_A 99 TPV-MKGLASRFVVALEPKVQAVARKLMESLRPRGSCDFVSDFAEILPLNIFLTLIDVPLEDRPRLRQLGVQLTRPDGSM 177 (396)
T ss_dssp HHH-HHHTCHHHHHHHHHHHHHHHHHHHHHHGGGSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCSSC
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhhcCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCHH
Confidence 999 89999999999888776 000000 0 00000 00012
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 168 RLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 168 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+..++.+.+.+++.+.|+++++. .++|+++.|+++..++ ..++++++.+++.++++||+
T Consensus 178 ~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~---~~l~~~el~~~~~~l~~AG~ 236 (396)
T 3oft_A 178 TVEQLKQAADDYLWPFIEKRMAQ-----PGDDLFSRILSEPVGG---RPWTVDEARRMCRNLLFGGL 236 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHTSCBTT---BCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhh
Confidence 34567788999999999999873 4679999999875533 36999999999999999995
No 51
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.75 E-value=2.7e-17 Score=131.03 Aligned_cols=170 Identities=15% Similarity=0.157 Sum_probs=117.4
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeC--CccEEEecCHHHHHHHHHhcCccCCCCCch--------h-H-------HHHhhc
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLG--SVPILVVSSAKMAEEVLKTHDLQFCSRPAL--------L-S-------QQKVSY 111 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~--~~~~v~i~d~~~i~~il~~~~~~~~~~~~~--------~-~-------~~~~~~ 111 (235)
..+++..+.++.+ ||||+++++| +.++|+++||+++++|+.++ .|++++.. . . .....
T Consensus 19 ~~~p~~~~~~l~~-~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 94 (425)
T 2z3t_A 19 IADPYPVYRRYRE-AAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVV- 94 (425)
T ss_dssp HHCCHHHHHHHHH-HCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHH-
T ss_pred hcChHHHHHHHHh-cCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Ccccccccccccccccccccccccccccccc-
Confidence 3578888999864 9999999887 67899999999999999864 67776531 1 1 11111
Q ss_pred CCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh----------------c------------------------
Q 026656 112 NGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE----------------D------------------------ 151 (235)
Q Consensus 112 ~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~------------------------ 151 (235)
+.++++. +|+.|+++|+++ +++|++.+++.+.+.+. +
T Consensus 95 -~~~l~~~-dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~dl~~~~~~~~~~~vi~~~~G~~~~~ 171 (425)
T 2z3t_A 95 -ENWLVFL-DPPHHTELRSLL-TTEFSPSIVTGLRPRIAELASALLDRLRAQRRPDLVEGFAAPLPILVISALLGIPEED 171 (425)
T ss_dssp -TTCGGGC-CHHHHHHHHHHH-HGGGSHHHHHHHHHHHHHHHHHHHHHHTTSSSCBHHHHTTTHHHHHHHHHHHTCCGGG
T ss_pred -ccccccC-CchHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 3566555 599999999999 89999999888877665 0
Q ss_pred ----------cccccccccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHH
Q 026656 152 ----------YFPSIGWVDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDH 221 (235)
Q Consensus 152 ----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~ 221 (235)
+...+..+.......++..++.+.+.+++.+.|+++++ +.++|+++.|+++..++ ..+|+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~~~~~---~~ls~~e 243 (425)
T 2z3t_A 172 HTWLRANAVALQEASTTRARDGRGYARAEAASQEFTRYFRREVDRRGG-----DDRDDLLTLLVRARDTG---SPLSVDG 243 (425)
T ss_dssp HHHHHHHHHHHHTTCTTCCC---HHHHHHHHHHHHHHHHHHHHCC------------CHHHHHHHHHHTT---CCCCHHH
T ss_pred HHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHhhccC---CCCCHHH
Confidence 00000000001112345566777888888888887765 23579999999876542 3699999
Q ss_pred HHHHHHHHhcccC
Q 026656 222 IKAVLMVKFHNQY 234 (235)
Q Consensus 222 i~~~~~~~~~AG~ 234 (235)
+.+++.++++||+
T Consensus 244 l~~~~~~l~~AG~ 256 (425)
T 2z3t_A 244 IVGTCVHLLTAGH 256 (425)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhh
Confidence 9999999999996
No 52
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.75 E-value=6.5e-19 Score=138.84 Aligned_cols=109 Identities=14% Similarity=0.179 Sum_probs=89.1
Q ss_pred CCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCC-chhHHHHhhcC
Q 026656 34 PGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRP-ALLSQQKVSYN 112 (235)
Q Consensus 34 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~-~~~~~~~~~~~ 112 (235)
++++..|++||+..+ ..+++..+.+++++|||+++ ++++.++|+++||+++++++.++ .|++++ .........
T Consensus 2 ~~~~~~p~iGnl~~~-~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~-- 75 (389)
T 1n97_A 2 KRLSLREAWPYLKDL-QQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLT-- 75 (389)
T ss_dssp EECCHHHHHHHHHHH-HHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHH--
T ss_pred cccccccccccHHHH-hhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHh--
Confidence 356678999999887 57889999999999999999 88888999999999999999865 677775 222222333
Q ss_pred CcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh
Q 026656 113 GLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE 150 (235)
Q Consensus 113 ~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~ 150 (235)
+.++++. +|++|+++|+.+ +++|++.+++.+.+.+.
T Consensus 76 g~~l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~ 111 (389)
T 1n97_A 76 GRGLLTD-WGESWKEARKAL-KDPFLPKNVRGYREAME 111 (389)
T ss_dssp CSSTTTC-CHHHHHHHHHHH-CGGGSHHHHHTTHHHHH
T ss_pred CCccccC-CcHHHHHHHHHh-CcccCHHHHHHHHHHHH
Confidence 4566554 699999999999 89999999999888766
No 53
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.74 E-value=5.6e-18 Score=134.28 Aligned_cols=175 Identities=15% Similarity=0.242 Sum_probs=119.7
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCc--hhHH-HH-----hh--cCCcceeec
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA--LLSQ-QK-----VS--YNGLDVAFA 119 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~--~~~~-~~-----~~--~~~~~~~~~ 119 (235)
.++++..+.++ ++||||+++++++.++|+++||+++++|+.++. +++++. .... .. +. ..+.+++ .
T Consensus 14 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 89 (408)
T 1odo_A 14 GADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF-T 89 (408)
T ss_dssp CTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG-G
T ss_pred cCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc-c
Confidence 67899999999 999999999988889999999999999997543 344331 0100 00 00 0134554 4
Q ss_pred CCCHHHHHHHHHHHHhhcchhhhhhcccchh-------------------cccccccc-c--------c-Cc--------
Q 026656 120 PYNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------------DYFPSIGW-V--------D-NI-------- 162 (235)
Q Consensus 120 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------------~~~p~~~~-~--------~-~~-------- 162 (235)
.+|+.|+++|+.+ +++|++.+++.+.+.+. ++...+.. + + ..
T Consensus 90 ~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~ 168 (408)
T 1odo_A 90 AYGPNHRKLRRLV-APAFSARRVDAMRPAVEAMVTGLVDRLAELPAGEPVDLRQELAYPLPIAVIGHLMGVPQDRRDGFR 168 (408)
T ss_dssp CCHHHHHHHHHTT-GGGGSHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCEEHHHHTTTHHHHHHHHHHHTCCHHHHHHHH
T ss_pred cCChHHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcchHHHHhhhhHHHHHHHHhCCCHHHHHHHH
Confidence 5699999999999 89999999888877665 00000100 0 0 00
Q ss_pred ---------chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhccc
Q 026656 163 ---------TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQ 233 (235)
Q Consensus 163 ---------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG 233 (235)
....++..++.+.+.+++.++|+++++. ..+|+++.|+++.+++..+..++++++.+++.++++||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~~~~~~l~~~ei~~~~~~~~~AG 243 (408)
T 1odo_A 169 ALVDGVFDTTLDQAEAQANTARLYEVLDQLIAAKRAT-----PGDDMTSLLIAARDDEGDGDRLSPEELRDTLLLMISAG 243 (408)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHHCC-----CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHhhC-----CCCCHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh
Confidence 0001234456677888899999888762 34799999998764311123599999999999999999
Q ss_pred C
Q 026656 234 Y 234 (235)
Q Consensus 234 ~ 234 (235)
+
T Consensus 244 ~ 244 (408)
T 1odo_A 244 Y 244 (408)
T ss_dssp H
T ss_pred H
Confidence 6
No 54
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.74 E-value=9.1e-18 Score=133.39 Aligned_cols=172 Identities=14% Similarity=0.161 Sum_probs=122.9
Q ss_pred CCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCch-hHHHHhh--cCCcceeecCCCHHH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPAL-LSQQKVS--YNGLDVAFAPYNAYW 125 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~g~~w 125 (235)
..+++..+.++ ++||||+++++ ++.+.|+++||+++++|+.++ .|++++.. .....+. ..+.++++ .+|++|
T Consensus 36 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~-~dg~~h 111 (417)
T 2y5n_A 36 GLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLS-MDPPEH 111 (417)
T ss_dssp SCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGG-CCTTHH
T ss_pred ccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCcc-CCchHH
Confidence 57889999999 89999999997 788999999999999999764 36555422 1100011 12455544 469999
Q ss_pred HHHHHHHHHhhcchhhhhhcccchh-------------c-cccc---c-c--------------------------cccC
Q 026656 126 REIRKICVVHLFNSNRVQSFRPIRE-------------D-YFPS---I-G--------------------------WVDN 161 (235)
Q Consensus 126 ~~~R~~~~~~~f~~~~l~~~~~~~~-------------~-~~p~---~-~--------------------------~~~~ 161 (235)
+++|+++ ++.|++.+++.+.+.+. . .+.+ + . .+..
T Consensus 112 ~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~vdl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~ 190 (417)
T 2y5n_A 112 SRLRRLV-VKAFTARRAESLRPRAREIAHELVDQMAATGQPADLVAMFARQLPVRVICELLGVPSADHDRFTRWSGAFLS 190 (417)
T ss_dssp HHHHHHH-HHHSCHHHHHHTHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHTTST
T ss_pred HHHHHHH-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeHHHHHHHHhHHHHHHHHcCCCHHHHHHHHHHHHHHhc
Confidence 9999999 89999998888877655 0 0000 0 0 0000
Q ss_pred -cchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 162 -ITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.....++..++.+.+.+++.++|+++++. ..+|+++.|+++.+++ ..++++++.+++.++++||+
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~ 256 (417)
T 2y5n_A 191 TAEVTAEEMQEAAEQAYAYMGDLIDRRRKE-----PTDDLVSALVQARDQQ---DSLSEQELLDLAIGLLVAGY 256 (417)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhhhccC---CCCCHHHHHHHHHHHHHHhH
Confidence 00112355677788899999999998762 3469999999875432 35999999999999999995
No 55
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.74 E-value=1.9e-17 Score=131.11 Aligned_cols=172 Identities=16% Similarity=0.218 Sum_probs=124.1
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCch--h----------HH-HHh-hcCCcc
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPAL--L----------SQ-QKV-SYNGLD 115 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~--~----------~~-~~~-~~~~~~ 115 (235)
..+++..+.++ ++||||+++++++.+.|+++||+++++++.++ .|++++.. . .. ... ...+.+
T Consensus 13 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (404)
T 1z8o_A 13 HVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFATN 89 (404)
T ss_dssp TSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSSS
T ss_pred ccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhcccc
Confidence 56889999999 99999999999888999999999999999865 56666432 1 11 110 001456
Q ss_pred eeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh----------------cccccc-cc---------c----------
Q 026656 116 VAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE----------------DYFPSI-GW---------V---------- 159 (235)
Q Consensus 116 ~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~~p~~-~~---------~---------- 159 (235)
+++. +|+.|+++|+++ +++|++.+++.+.+.+. ++...+ .. +
T Consensus 90 l~~~-~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~ 167 (404)
T 1z8o_A 90 MGTS-DPPTHTRLRKLV-SQEFTVRRVEAMRPRVEQITAELLDEVGDSGVVDIVDRFAHPLPIKVICELLGVDEKYRGEF 167 (404)
T ss_dssp GGGC-CTTHHHHHHHHH-HTTSCHHHHHHTHHHHHHHHHHHHHTSCSSSEEEHHHHTTTHHHHHHHHHHTTCCGGGTTTH
T ss_pred cccC-CCcHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCcchHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 6554 699999999999 89999999988887665 000000 00 0
Q ss_pred -------cC-cchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHH-hhhcCCCCCCCHHHHHHHHHHHh
Q 026656 160 -------DN-ITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQI-WKQRGSKVDITWDHIKAVLMVKF 230 (235)
Q Consensus 160 -------~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~-~~~~~~~~~ls~~~i~~~~~~~~ 230 (235)
.. ..+..++..++.+.+.+++.+.|+++++. ..+|+++.|+++ .+++ ..+|++++.+++.+++
T Consensus 168 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~~---~~l~~~ei~~~~~~~~ 239 (404)
T 1z8o_A 168 GRWSSEILVMDPERAEQRGQAAREVVNFILDLVERRRTE-----PGDDLLSALIRVQDDDD---GRLSADELTSIALVLL 239 (404)
T ss_dssp HHHHHHHHCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHCEETTT---EECCHHHHHHHHHHHH
T ss_pred HHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhhhcccC---CCCCHHHHHHHHHHHH
Confidence 00 00013455667788899999999998762 346999999987 4322 3599999999999999
Q ss_pred cccC
Q 026656 231 HNQY 234 (235)
Q Consensus 231 ~AG~ 234 (235)
+||+
T Consensus 240 ~AG~ 243 (404)
T 1z8o_A 240 LAGF 243 (404)
T ss_dssp HHHH
T ss_pred hcch
Confidence 9995
No 56
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.73 E-value=3.5e-17 Score=129.82 Aligned_cols=172 Identities=16% Similarity=0.208 Sum_probs=120.3
Q ss_pred CCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCc-hhHHH--Hhh--------cC-Ccce
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPA-LLSQQ--KVS--------YN-GLDV 116 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~-~~~~~--~~~--------~~-~~~~ 116 (235)
..+++..+.++ ++||||+++++ ++.++|+++||+++++++.++. +++++. ..... ... .. +.++
T Consensus 16 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 92 (411)
T 1gwi_A 16 VTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGRSM 92 (411)
T ss_dssp CSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCSSG
T ss_pred cCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccccc
Confidence 57899999999 99999999998 7889999999999999997653 444431 11100 000 01 3455
Q ss_pred eecCCCHHHHHHHHHHHHhhcchhhhhhcccchh-----------------cccccccc-c--------c-Cc-------
Q 026656 117 AFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIGW-V--------D-NI------- 162 (235)
Q Consensus 117 ~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~~-~--------~-~~------- 162 (235)
+ ..+|++|+++|+.+ +++|++.+++.+.+.+. ++...+.. + + ..
T Consensus 93 ~-~~~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~ 170 (411)
T 1gwi_A 93 L-TVDGAEHRRLRTLV-AQALTVRRVEHMRGRITELTDRLLDELPADGGVVDLKAAFAYPLPMYVVADLMGIEEARLPRL 170 (411)
T ss_dssp G-GCCHHHHHHHHHHH-TTTSCHHHHHTTHHHHHHHHHHHHHTSCCSCCCEEHHHHTTTHHHHHHHHHHHTCCGGGHHHH
T ss_pred c-cCCcHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchHHHHhhHHHHHHHHHHhCCCHHHHHHH
Confidence 4 45699999999999 89999999888877665 00000000 0 0 00
Q ss_pred ----------chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcc
Q 026656 163 ----------TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHN 232 (235)
Q Consensus 163 ----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~A 232 (235)
....++..++.+.+.+++.++|+++++. ..+|+++.|+++.+++ ..++++++.+++.++++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~d~l~~ll~~~~~~---~~l~~~~i~~~~~~~~~A 242 (411)
T 1gwi_A 171 KVLFEKFFSTQTPPEEVVATLTELASIMTDTVAAKRAA-----PGDDLTSALIQASENG---DHLTDAEIVSTLQLMVAA 242 (411)
T ss_dssp HHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCChHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhcccC---CCCCHHHHHHHHHHHHHH
Confidence 0011334556677888999999988762 3479999999875432 359999999999999999
Q ss_pred cC
Q 026656 233 QY 234 (235)
Q Consensus 233 G~ 234 (235)
|+
T Consensus 243 G~ 244 (411)
T 1gwi_A 243 GH 244 (411)
T ss_dssp HH
T ss_pred Hh
Confidence 95
No 57
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.73 E-value=1.2e-17 Score=132.47 Aligned_cols=170 Identities=11% Similarity=0.061 Sum_probs=119.5
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCC--ccEEEecCHHHHHHHHHhcCccCCCCCchhH----HHHhhcC-CcceeecCCC
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGS--VPILVVSSAKMAEEVLKTHDLQFCSRPALLS----QQKVSYN-GLDVAFAPYN 122 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~--~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~g 122 (235)
+++++..+.+++ +||||+++.+++ .+.|+++||+++++|+.+ ..|++++.... .....+. +.+++ ..+|
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~l~-~~dg 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITND--PRFGRAEVTQRQITRLAPHFKPRPGSLA-FADQ 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTC--TTEESGGGGGSCBCBSSSCCCCCTTCST-TCCT
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcC--CCcccCCCCCCCccccccchhccccccc-cCCc
Confidence 566778999987 799999998754 679999999999999975 35665543210 0111101 34554 4469
Q ss_pred HHHHHHHHHHHHhhcchhhhhhcccchh-----------------ccccccc---------------------------c
Q 026656 123 AYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIG---------------------------W 158 (235)
Q Consensus 123 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~---------------------------~ 158 (235)
++|+++|+++ +++|++.+++.+.+.+. ++...+. .
T Consensus 102 ~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~g~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~ 180 (411)
T 2dkk_A 102 PDHNRLRRAV-AGAFTVGATKRLRPRAQEILDGLVDGILAEGPPADLVERVLEPFPIAVVSEVMGVPAADRERVHSWTRQ 180 (411)
T ss_dssp THHHHHHHHH-GGGSSHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEHHHHTTTHHHHHHHHHHHTCCSSHHHHHHHHHGG
T ss_pred hHHHHHHHHh-hHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 9999999999 89999999998887765 0000000 0
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhccc
Q 026656 159 VDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQ 233 (235)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG 233 (235)
+.......++..++.+.+.+++.++|+++++ +..+|+++.|+++ .++ ..+|++++.+++.++++||
T Consensus 181 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~r~~-----~~~~dll~~ll~~-~~~---~~ls~~el~~~~~~l~~AG 246 (411)
T 2dkk_A 181 IISTSGGAEAAERAKRGLYGWITETVRARAG-----SEGGDVYSMLGAA-VGR---GEVGETEAVGLAGPLQIGG 246 (411)
T ss_dssp GCSSCSCSHHHHHHHHHHHHHHHHHHHTTTT-----CCSSCHHHHHHHH-HHT---TSSCTTSHHHHHHHHHHTH
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHh-cCC---CCCCHHHHHHHHHHHHHhh
Confidence 0000001134556778888999999998876 2356999999988 433 3699999999999999998
No 58
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.72 E-value=6.3e-17 Score=128.66 Aligned_cols=170 Identities=15% Similarity=0.110 Sum_probs=121.5
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCc-----hh-H--HHHhhcC-CcceeecC
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA-----LL-S--QQKVSYN-GLDVAFAP 120 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~-----~~-~--~~~~~~~-~~~~~~~~ 120 (235)
..+++..+.++ ++||||++ + ++.++|+++||+++++|+.++. |++++. .. . ...+... +.++++ .
T Consensus 25 ~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 98 (419)
T 1q5d_A 25 AEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFG-L 98 (419)
T ss_dssp TTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTT-S
T ss_pred hhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhccccccc-C
Confidence 57889999999 78999999 5 7778999999999999998663 877762 11 1 0111100 234544 4
Q ss_pred CCHHHHHHHHHHHHhhcchhhhhhcccchh----------------cccccc-cc-------------------------
Q 026656 121 YNAYWREIRKICVVHLFNSNRVQSFRPIRE----------------DYFPSI-GW------------------------- 158 (235)
Q Consensus 121 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~~p~~-~~------------------------- 158 (235)
+|+.|+++|+++ +++|++.+++.+.+.+. ++...+ ..
T Consensus 99 ~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~ 177 (419)
T 1q5d_A 99 PPEDHARVRKLV-NPSFTSRAIDLLRAEIQRTVDQLLDARSGQEEFDVVRDYAEGIPMRAISALLKVPAECDEKFRRFGS 177 (419)
T ss_dssp CHHHHHHHHHHH-GGGGSHHHHGGGHHHHHHHHHHHHHHHTTSSCEETTTTTGGGSHHHHHHHHTTCCGGGHHHHHHHHH
T ss_pred CchHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 699999999999 89999999988887665 000000 00
Q ss_pred ----------ccCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcc-cHHHHHHHHhhhcCCCCCCCHHHHHHHHH
Q 026656 159 ----------VDNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQE-DIVDVLLQIWKQRGSKVDITWDHIKAVLM 227 (235)
Q Consensus 159 ----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-d~l~~ll~~~~~~~~~~~ls~~~i~~~~~ 227 (235)
+.......++..++.+++.+++.++|+++++. .++ |+++.|+++.+++ ..+|++++.+++.
T Consensus 178 ~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~~dll~~ll~~~~~~---~~l~~~ei~~~~~ 249 (419)
T 1q5d_A 178 ATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDERRRN-----PLENDVLTMLLQAEADG---SRLSTKELVALVG 249 (419)
T ss_dssp HHHHHTTTTTSSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSCHHHHHHHHHHSS---TTCCHHHHHHHHH
T ss_pred HHHHhcccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCCHHHHHHhhhccC---CCCCHHHHHHHHH
Confidence 00001122456677788899999999988762 345 9999999875432 3699999999999
Q ss_pred HHhcccC
Q 026656 228 VKFHNQY 234 (235)
Q Consensus 228 ~~~~AG~ 234 (235)
++++||+
T Consensus 250 ~l~~AG~ 256 (419)
T 1q5d_A 250 AIIAAGT 256 (419)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 9999996
No 59
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.71 E-value=6.5e-17 Score=129.15 Aligned_cols=172 Identities=10% Similarity=0.077 Sum_probs=122.3
Q ss_pred CChHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHhcCccCCCCCch--h-HHHHhhcCCcceeecC
Q 026656 51 SNPQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKTHDLQFCSRPAL--L-SQQKVSYNGLDVAFAP 120 (235)
Q Consensus 51 ~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~ 120 (235)
.+++..+.+++ +||||+++..+ +.++|+++||+++++|+.++ ..|++++.. . ....+...+.++++.
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~- 120 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVL- 120 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGC-
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccC-
Confidence 46788899995 68999999875 66899999999999999875 467776531 1 111111114566555
Q ss_pred CCHHHHHHHHHHHHhhcchhhhhhcccchh-------------c---cc---ccc-ccc---------------------
Q 026656 121 YNAYWREIRKICVVHLFNSNRVQSFRPIRE-------------D---YF---PSI-GWV--------------------- 159 (235)
Q Consensus 121 ~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-------------~---~~---p~~-~~~--------------------- 159 (235)
+|++|+++|+++ +++|++.+++.+.+.+. . .+ ..+ ..+
T Consensus 121 dg~~h~~~R~~l-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~vd~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~ 199 (435)
T 2wm5_A 121 DDPRHQRLRSIV-SRAFTPKVVARIEAAVRDRAHRLVSSMIANNPDRQADLVSELAGPLPLQIICDMMGIPKADHQRIFH 199 (435)
T ss_dssp CTTHHHHHHHHH-HHTCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHH
T ss_pred CcHHHHHHHHHh-HHhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcEehHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 699999999999 89999998888877665 0 00 000 000
Q ss_pred ----------cCcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHH
Q 026656 160 ----------DNITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVK 229 (235)
Q Consensus 160 ----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~ 229 (235)
....+..++..++.+++.+++.++|+++++ +.++|+++.|+++..++ ..++++++.+++.++
T Consensus 200 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l 271 (435)
T 2wm5_A 200 WTNVILGFGDPDLATDFDEFMQVSADIGAYATALAEDRRV-----NHHDDLTSSLVEAEVDG---ERLSSREIASFFILL 271 (435)
T ss_dssp HHHHHHHTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHCCBTT---BCCCHHHHHHHHHHH
T ss_pred HHHHHhccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCCHHHHHHhhhccC---CCCCHHHHHHHHHHH
Confidence 000011245667778889999999999876 23579999999875432 359999999999999
Q ss_pred hcccC
Q 026656 230 FHNQY 234 (235)
Q Consensus 230 ~~AG~ 234 (235)
++||+
T Consensus 272 ~~AG~ 276 (435)
T 2wm5_A 272 VVAGN 276 (435)
T ss_dssp HHHTT
T ss_pred HHHhh
Confidence 99996
No 60
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.71 E-value=9.2e-17 Score=126.93 Aligned_cols=167 Identities=11% Similarity=0.099 Sum_probs=120.5
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHHH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIR 129 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R 129 (235)
..+++..+.++++ ||||+++. .++|+++||+++++++.++ ..|++++... .... .+.++++. +|++|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~-~~~~--~~~~l~~~-~g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQP-ELFSNAGGIR-PDQP--ALPMMIDM-DDPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCT-TTEESTTCSS-TTSC--CCSSGGGC-CTTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCc-ccccCccccC-Cccc--cccccccc-CchHHHHHH
Confidence 4678999999987 99999763 3799999999999999764 3677765422 1111 24555554 699999999
Q ss_pred HHHHHhhcchhhhhhcccchh----------------ccc-cccc-----------------------c---c------c
Q 026656 130 KICVVHLFNSNRVQSFRPIRE----------------DYF-PSIG-----------------------W---V------D 160 (235)
Q Consensus 130 ~~~~~~~f~~~~l~~~~~~~~----------------~~~-p~~~-----------------------~---~------~ 160 (235)
+++ +++|++.+++.+.+.+. ++. .+.. + + .
T Consensus 88 ~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~d~~~~~~~~~~~~vi~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 166 (398)
T 2xkr_A 88 KLV-NAGFTRKRVKDKEASIAALCDTLIDAVCERGECDFVRDLAAPLPMAVIGDMLGVRPEQRDMFLRWSDDLVTFLSSH 166 (398)
T ss_dssp HHH-GGGSCHHHHHTTHHHHHHHHHHHHHTTTTTSEEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHTSC
T ss_pred HHh-hhhhCHHHHHHHHHHHHHHHHHHHHhhhhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhccCcc
Confidence 999 89999999988877665 000 0000 0 0 0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 161 NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+.+...++..++.+.+.+++.++|+++++ +.++|+++.|+++..++ ..+|++++.+++.++++||+
T Consensus 167 ~~p~~~~~~~~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~~~~~---~~ls~~ei~~~~~~l~~AG~ 232 (398)
T 2xkr_A 167 VSQEDFQITMDAFAAYNDFTRATIAARRA-----DPTDDLVSVLVSSEVDG---ERLSDDELVMETLLILIGGD 232 (398)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHCCBTT---BCCCHHHHHHHHHHHHHHHS
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHHhhccC---CCCCHHHHHHHHHHHHHHhh
Confidence 01122345566777888999999998876 23579999999875432 36999999999999999996
No 61
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.70 E-value=2.4e-16 Score=125.60 Aligned_cols=173 Identities=16% Similarity=0.175 Sum_probs=121.7
Q ss_pred CCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCc---hhHHH-----H-hhcCCcceeec
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPA---LLSQQ-----K-VSYNGLDVAFA 119 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~---~~~~~-----~-~~~~~~~~~~~ 119 (235)
..+++..+.+++++ |||+++.. ++.+.++|++++++++++++. ..|++++. ..... . ....+.++ +.
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ 113 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNH-DIFSSDAGYGGIIIDDGIQKGGDGGLDLPNF-IA 113 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCT-TTEECCGGGTCSSSSCCC-------CCCCCG-GG
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCC-cccccccccCCCCcccccccccccccccCcc-cc
Confidence 35689999999876 99999976 456799999999999999765 45665431 10000 0 01113344 44
Q ss_pred CCCHHHHHHHHHHHHhhcchhhhhhcccchh----------------cc----------------c--c---------cc
Q 026656 120 PYNAYWREIRKICVVHLFNSNRVQSFRPIRE----------------DY----------------F--P---------SI 156 (235)
Q Consensus 120 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~----------------~--p---------~~ 156 (235)
.+|++|+++|+++ ++.|++.+++.+.+.+. ++ + | |.
T Consensus 114 ~dg~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~ 192 (426)
T 3rwl_A 114 MDRPRHDEQRKAV-SPIVAPANLAALEGTIRERVSKTLDGLPVGEEFDWVDRVSIEITTQMLATLFDFPFEERRKLTRWS 192 (426)
T ss_dssp CCTTHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHTSCSSSCEEHHHHTHHHHHHHHHHHHHTCCGGGTHHHHHHH
T ss_pred cCchHHHHHHHHh-hhhhCHHHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4699999999999 89999999999888766 00 0 0 00
Q ss_pred cccc-----CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhc
Q 026656 157 GWVD-----NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFH 231 (235)
Q Consensus 157 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ 231 (235)
..+. ......++..++.+++.+++.++++++++ .+..+|+++.|+++..+++ ++++++++++.++++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~----~~~~~dll~~ll~~~~~~~----ls~~el~~~~~~l~~ 264 (426)
T 3rwl_A 193 DVTTAAPGGGVVESWDQRKTELLECAAYFQVLWNERVN----KDPGNDLISMLAHSPATRN----MTPEEYLGNVLLLIV 264 (426)
T ss_dssp HHHTCCTTSSSCSSHHHHHHHHHHHHHHHHHHHHHHHT----SCCCSSHHHHHHHCGGGGG----CCHHHHHHHHHHHHH
T ss_pred HHHHhccCccccccHHHHHHHHHHHHHHHHHHHHHHhh----cCCCCCHHHHHHhcccCCC----CCHHHHHHHHHHHHH
Confidence 0000 01112345566778899999999999843 1456899999999866543 899999999999999
Q ss_pred ccC
Q 026656 232 NQY 234 (235)
Q Consensus 232 AG~ 234 (235)
||+
T Consensus 265 AG~ 267 (426)
T 3rwl_A 265 GGN 267 (426)
T ss_dssp HHH
T ss_pred HHH
Confidence 995
No 62
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.68 E-value=3.1e-16 Score=123.85 Aligned_cols=167 Identities=14% Similarity=0.176 Sum_probs=117.9
Q ss_pred CChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHH------HhhcC-CcceeecCCCH
Q 026656 51 SNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQ------KVSYN-GLDVAFAPYNA 123 (235)
Q Consensus 51 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~g~ 123 (235)
.+++.++.++ ++||||++ + +.+.|+++||+++++++.+ ..|++++...... ..... +.++++. +|+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGD--ERFARTGIRRFWTDLVGPGLLAEIVGDIILFQ-DEP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTC--TTEESHHHHHHHHHHHCSSHHHHHHTTCGGGC-CTT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcC--CCcccCcccccccccccccccccccccccccC-Cch
Confidence 4678888877 58999998 6 5789999999999999975 3566543221110 11111 4556544 699
Q ss_pred HHHHHHHHHHHhhcchhhhhhcccchh----------------c----------------cc-----------cccc---
Q 026656 124 YWREIRKICVVHLFNSNRVQSFRPIRE----------------D----------------YF-----------PSIG--- 157 (235)
Q Consensus 124 ~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~----------------~~-----------p~~~--- 157 (235)
+|+++|+++ +++|++.+++.+.+.+. + .+ .+..
T Consensus 86 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~dl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 164 (397)
T 3buj_A 86 DHGRLRGVV-GPAFSPSALRRLEPVIAGTVDDLLRPALARGAMDVVDELAYPLALRAVLGLLGLPAADWGAVGRWSRDVG 164 (397)
T ss_dssp HHHHHHHHH-GGGSSTTTTGGGHHHHHHHHHHHHHHHHTTTEEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHHhhcCCeehHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 999999999 89999999988887665 0 00 0000
Q ss_pred -cccC--cchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 158 -WVDN--ITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 158 -~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.+.. .....++..++.+++.+++.+.|+++++. .++|+++.|+++.+++ + +|++++.+++.++++||+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~---~-ls~~ei~~~~~~~~~AG~ 235 (397)
T 3buj_A 165 RTLDRGASAEDMRRGHAAIAEFADYVERALARRRRE-----GGEDLLALMLDAHDRG---L-MSRNEIVSTVVTFIFTGH 235 (397)
T ss_dssp GGGCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCSHHHHHHHHHHTT---S-SCHHHHHHHHHHHHHHHH
T ss_pred hhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCCCHHHHHHHhhhcC---C-CCHHHHHHHHHHHHHcCc
Confidence 0000 11223456677788999999999998763 3569999999876432 2 999999999999999995
No 63
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.68 E-value=3.4e-16 Score=124.25 Aligned_cols=169 Identities=16% Similarity=0.113 Sum_probs=118.8
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCC--ccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhh---cC-CcceeecCCCH
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGS--VPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVS---YN-GLDVAFAPYNA 123 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~--~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~g~ 123 (235)
..+++..+.++++ ||||+++...| .+.++|++++++++++++. ..|++++......... .. +.++ +..+|+
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l-~~~dg~ 112 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMM-VVSEHE 112 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSG-GGCCHH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCc-cccCcH
Confidence 3589999999977 89999986344 7899999999999999543 5677765432211110 01 2334 445699
Q ss_pred HHHHHHHHHHHhhcchhhhhhcccchh----------------cccccc-ccc---------cCc---------------
Q 026656 124 YWREIRKICVVHLFNSNRVQSFRPIRE----------------DYFPSI-GWV---------DNI--------------- 162 (235)
Q Consensus 124 ~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~~p~~-~~~---------~~~--------------- 162 (235)
+|+++|+++ +++|++..++.+.+.+. ++...+ ..+ ...
T Consensus 113 ~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~~dl~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~ 191 (415)
T 3mgx_A 113 QHRKLRKLV-GPLLSRAAARKLAERVRIEVGDVLGRVLDGEVCDAATAIGPRIPAAVVCEILGVPAEDEDMLIDLTNHAF 191 (415)
T ss_dssp HHHHHHHHH-GGGSSHHHHHHSHHHHHHHHHHHTTTSSSSSCEESTTTTTTHHHHHHHHHHHTCCGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHh-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 999999998 89999999999888776 111111 000 000
Q ss_pred ---chH--HHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 163 ---TGM--IRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 163 ---~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.+. .....++.+++.+++.++|+++++ +..+|+++.|+++. .+|++++.+++.++++||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----~~~~dll~~ll~~~-------~ls~~el~~~~~~ll~AG~ 256 (415)
T 3mgx_A 192 GGEDELFDGMTPRQAHTEILVYFDELITARRK-----EPGDDLVSTLVTDD-------DLTIDDVLLNCDNVLIGGN 256 (415)
T ss_dssp SCCC----CCCHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHCT-------TSCHHHHHHHHHHHHHHHH
T ss_pred cccCcccchHHHHHHHHHHHHHHHHHHHHHHh-----CCCCCHHHHHHhCC-------CCCHHHHHHHHHHHHHhhh
Confidence 000 011235677888999999999887 24579999999864 3899999999999999995
No 64
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.67 E-value=2.9e-16 Score=124.08 Aligned_cols=164 Identities=12% Similarity=0.120 Sum_probs=110.1
Q ss_pred HHHHHHhhCCeEEEEeC-Cc---cEEEecCHHHHHHHHHhcCccCCCCCc------hhHHHHh--hcCCcceeecCCCHH
Q 026656 57 FWRLSKQYGPMVSLRLG-SV---PILVVSSAKMAEEVLKTHDLQFCSRPA------LLSQQKV--SYNGLDVAFAPYNAY 124 (235)
Q Consensus 57 ~~~~~~~yg~v~~~~~~-~~---~~v~i~d~~~i~~il~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~g~~ 124 (235)
+.+|+++ |||+++.++ +. ++|+++||+++++++.++ ..|++++. ....... ...+.++++. +|++
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~ 95 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDH-QQFSTRRRWDPRDEIGGKGIFRPRELVGNLMDY-DPPE 95 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCT-TTEEECTTCCC-------------CCTTCGGGC-CTTH
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhC-cccccccccccccccCCcccccccccccCcccc-CCHH
Confidence 3457666 999999865 45 899999999999999333 34666543 1111111 1124566554 6999
Q ss_pred HHHHHHHHHHhhcchhhhhhcccchh-----------------ccccccc---------------------------ccc
Q 026656 125 WREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIG---------------------------WVD 160 (235)
Q Consensus 125 w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~---------------------------~~~ 160 (235)
|+++|+++ ++.|++.+++.+.+.+. ++...+. .+.
T Consensus 96 ~~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 174 (398)
T 1lfk_A 96 HTRLRRKL-TPGFTLRKMQRMAPYIEQIVNDRLDEMERAGSPADLIAFVADKVPGAVLCELVGVPRDDRDMFMKLCHGHL 174 (398)
T ss_dssp HHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHHCSSEEHHHHTTTTHHHHHHHHHHTCCGGGHHHHHHHHHHTT
T ss_pred HHHHHHHH-HhhhCHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 99999999 89999999988877665 0000000 000
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 161 NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
...+..++..++.+.+.+++.+.|+++++. ..+|+++.|+++. ++ .++++++.+++.++++||+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~-~~----~l~~~el~~~~~~l~~AG~ 238 (398)
T 1lfk_A 175 DASLSQKRRAALGDKFSRYLLAMIARERKE-----PGEGMIGAVVAEY-GD----DATDEELRGFCVQVMLAGD 238 (398)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHHHHHH-GG----GSCHHHHHHHHHHHHHHTS
T ss_pred hcccchHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHHhc-CC----CCCHHHHHHHHHHHHHHhc
Confidence 011112456677788999999999998762 3569999999876 32 4999999999999999996
No 65
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.67 E-value=5.2e-16 Score=122.77 Aligned_cols=166 Identities=15% Similarity=0.160 Sum_probs=116.9
Q ss_pred CCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCCCCCchh-HHHHhhcCCcc--eeecCCC---
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFCSRPALL-SQQKVSYNGLD--VAFAPYN--- 122 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~g--- 122 (235)
..+++..+.++ ++||||+++++ ++.+.|+++||+++++|+.++ .|++++... ...... .+.+ +++. +|
T Consensus 25 ~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~-~~~~~~l~~~-~g~~~ 99 (404)
T 2xbk_A 25 MLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYV-RSPFLDLLIS-DADAE 99 (404)
T ss_dssp TTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSS-CCHHHHTTCB-CSCHH
T ss_pred ccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCccc-ccccccceee-CCCCC
Confidence 46788999999 89999999997 788999999999999999764 366554321 111111 1344 5444 69
Q ss_pred ---HHHHHHHHHHHHhhcchhhhhhcccchh-----------------cccccc-ccc---------cC-cch--HH---
Q 026656 123 ---AYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSI-GWV---------DN-ITG--MI--- 166 (235)
Q Consensus 123 ---~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~-~~~---------~~-~~~--~~--- 166 (235)
++|+++|+++ ++.|++.+++.+.+.+. ++...+ ..+ .. ... ..
T Consensus 100 ~~~~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~g~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~ 178 (404)
T 2xbk_A 100 SGRRQHAETRRLL-TPLFSARRVLEMQPKVEEAADTLLDAFIAQGPPGDLHGELTVPFALTVLCEVIGVPPQRRAELTTL 178 (404)
T ss_dssp HHHHHHHHHHHHH-GGGGCHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEHHHHTHHHHHHHHHHHHHTCCGGGHHHHHHH
T ss_pred CCCchHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 9999999999 89999999988877665 000000 000 00 000 00
Q ss_pred ----------HHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 167 ----------RRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 167 ----------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.+..++.+.+.+++.++|+++++. ..+|+++.| + ++ .++++++.+++.++++||+
T Consensus 179 ~~~~~~~~~~p~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~l-~---~~----~ls~~ei~~~~~~l~~AG~ 243 (404)
T 2xbk_A 179 LAGIAKLDDREGAVRAQDDLFGYVAGLVEHKRAE-----PGPDIISRL-N---DG----ELTEDRVAHLAMGLLFAGL 243 (404)
T ss_dssp HHHHTBSSCHHHHHHHHHHHHHHHHHHHHHHHHS-----CCSSHHHHH-H---SS----SCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHh-h---cC----CCCHHHHHHHHHHHHHhch
Confidence 044566778889999999988762 346899988 2 11 5999999999999999996
No 66
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.67 E-value=9.1e-17 Score=127.55 Aligned_cols=173 Identities=15% Similarity=0.114 Sum_probs=119.8
Q ss_pred CCChHHHHHHHHHhhCCeE-----EEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchh--HH-HHh-h-cCCcceeec
Q 026656 50 YSNPQNYFWRLSKQYGPMV-----SLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALL--SQ-QKV-S-YNGLDVAFA 119 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~-----~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~--~~-~~~-~-~~~~~~~~~ 119 (235)
..+++.++.++. +||||+ +++. .+.|+++||+++++++.++ ..|++++... .. ..+ . ..+.++++.
T Consensus 24 ~~~p~~~~~~l~-~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRALR-DHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHHH-HHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHHH-hcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 467889999984 689999 7755 5799999999999999875 5677765431 11 122 1 225666555
Q ss_pred CCCHHHHHHHHHHHHhhcchhhhhhcccchh----------------ccc-ccccc---------ccC-c----------
Q 026656 120 PYNAYWREIRKICVVHLFNSNRVQSFRPIRE----------------DYF-PSIGW---------VDN-I---------- 162 (235)
Q Consensus 120 ~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~----------------~~~-p~~~~---------~~~-~---------- 162 (235)
+|+.|+++|+++ +++|++.+++.+.+.+. ++. .+... +.. .
T Consensus 100 -~g~~h~~~R~~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~~~~vdl~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~ 177 (414)
T 2uuq_A 100 -DPPVHTEFRKLV-SRGFTPRQVETVEPTVRKFVVERLEKLRANGGGDIVTELFKPLPSMVVAHYLGVPEEDWTQFDGWT 177 (414)
T ss_dssp -CTTHHHHHHHHH-HTTSSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTTHHHHHHHHHHTTCCGGGHHHHHHHH
T ss_pred -CchhHHHHHHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHhHHHHHHHHhCCCHHHHHHHHHHH
Confidence 699999999999 89999999988887666 111 00000 000 0
Q ss_pred --------c-hHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhccc
Q 026656 163 --------T-GMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQ 233 (235)
Q Consensus 163 --------~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG 233 (235)
. +...+..++.+++.+++.++|+++++. ..+|+++.|+++..++ .+..+|++++.+++.++++||
T Consensus 178 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~i~~r~~~-----~~~dll~~ll~~~~~~-~~~~ls~~ei~~~~~~l~~AG 251 (414)
T 2uuq_A 178 QAIVAANAVDGATTGALDAVGSMMAYFTGLIERRRTE-----PADDAISHLVAAGVGA-DGDTAGTLSILAFTFTMVTGG 251 (414)
T ss_dssp HHHHHHHHC-----CCHHHHHHHHHHHHHHHHHHTTS-----CCSSHHHHHHHTTTTC-TTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcccCCchhHHHHHHHHHHHHHHHHHHHHHhC-----CCCCHHHHHHhccccc-CCCCCCHHHHHHHHHHHHHhh
Confidence 0 000123456677888899999988762 3579999999875410 123589999999999999999
Q ss_pred C
Q 026656 234 Y 234 (235)
Q Consensus 234 ~ 234 (235)
+
T Consensus 252 ~ 252 (414)
T 2uuq_A 252 N 252 (414)
T ss_dssp S
T ss_pred H
Confidence 6
No 67
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.64 E-value=7.9e-16 Score=122.24 Aligned_cols=169 Identities=11% Similarity=0.095 Sum_probs=118.0
Q ss_pred CCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCc-hhHHH------HhhcCCcceeecCCC
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA-LLSQQ------KVSYNGLDVAFAPYN 122 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~g 122 (235)
..+++.+ ++.++|||++++..++.. ++|++++++++|++++. ++.... ..... .....+.++ +..+|
T Consensus 32 ~~~P~~~--~~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~dg 105 (416)
T 3p3o_A 32 PNFSWDS--PEVAEAREKSWIARTPLA-LLVLRYAEADQLARDKR--LISGFRGLVDMVGTPEGPVRDFMVDFL-QSLDG 105 (416)
T ss_dssp TTCCTTS--HHHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTT--EECSHHHHHHHHTCCSSHHHHHHHHSG-GGCCH
T ss_pred ccCCchH--HHHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcc--cccCCccccccccccccchhhhhcCcc-ccCCc
Confidence 4567777 444679999999886656 99999999999998653 332211 10000 000002344 44469
Q ss_pred HHHHHHHHHHHHhhcchhhhhhcccchh---------------c---------------------------ccccccccc
Q 026656 123 AYWREIRKICVVHLFNSNRVQSFRPIRE---------------D---------------------------YFPSIGWVD 160 (235)
Q Consensus 123 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~---------------~---------------------------~~p~~~~~~ 160 (235)
++|+++|+++ ++.|++..++.+.+.+. + +..+...+.
T Consensus 106 ~~h~~~Rr~~-~~~fs~~~l~~~~~~i~~~~~~ll~~l~~g~~d~~~~~~~~~~~~vi~~l~G~~~~~~~~~~~~~~~~~ 184 (416)
T 3p3o_A 106 ADHRRLRGLA-THPFTPRRITAVQPFVRSTVEQLIDKLPQGDFDFVQHFPHPLPALVMCQLLGFPLEDYDTVGRLSIETN 184 (416)
T ss_dssp HHHHHHHHTT-CGGGSHHHHHHHHHHHHHHHHHHHHTCCSSSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHHHTTC
T ss_pred hHHHHHHHHH-HHhhCHHHHHHHHHHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 9999999999 89999999988877665 0 000000000
Q ss_pred ------CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 161 ------NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 161 ------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
......++..++.+.+.+++.++|+++++ +..+|+++.|+++..++ .++++++++++.++++||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----~~~~dll~~ll~~~~~~----~ls~~el~~~~~~l~~AG~ 255 (416)
T 3p3o_A 185 LGLALSNDQDILVKVEQGLGRMFDYLVAAIEKRKV-----EPGDDLTSDIVRAFHDG----VLDDYELRTLVATVLVAGY 255 (416)
T ss_dssp GGGTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHHH
T ss_pred hhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHh-----CCCccHHHHHHHhhccC----CCCHHHHHHHHHHHHHhhc
Confidence 01123456778888999999999999987 35679999999886654 4999999999999999995
No 68
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.59 E-value=9.6e-15 Score=115.20 Aligned_cols=167 Identities=16% Similarity=0.170 Sum_probs=114.1
Q ss_pred CChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHHHH
Q 026656 51 SNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRK 130 (235)
Q Consensus 51 ~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~ 130 (235)
.+++..+.++++ +|||+++.. ..+++++++++++++.+. .|++++...........+.++ +..+|++|+++|+
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~---g~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l-~~~dg~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLED---GTYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTA-LGSDPPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTT---SCEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSG-GGCCTTHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecC---CeEEEcCHHHHHHHHcCC--Cccccccccccccchhccccc-ccCCchHHHHHHH
Confidence 478888988866 489998743 378999999999999643 455432111111111113444 4456999999999
Q ss_pred HHHHhhcchhhhhhcccchh-------------------------------------------cccccc-ccc----cCc
Q 026656 131 ICVVHLFNSNRVQSFRPIRE-------------------------------------------DYFPSI-GWV----DNI 162 (235)
Q Consensus 131 ~~~~~~f~~~~l~~~~~~~~-------------------------------------------~~~p~~-~~~----~~~ 162 (235)
++ ++.|++++++.+.+.+. .+..+. ..+ ..+
T Consensus 93 ~~-~~~fs~~~~~~~~~~i~~~~~~l~~~~~~~~~~d~~~~~~~~~~~vi~~~~~G~~~~~~~~~~~~~~~~~~~~~~~p 171 (394)
T 2wiy_A 93 QT-NKWFTPKLVDGWVRTTRELVGDLLDGVEAGQVIEARRDLAVVPTHVTMARVLQLPEDDADAVMEAMFEAMLMQSAEP 171 (394)
T ss_dssp HH-HTTCSHHHHHHHTHHHHHHHHHHHHTCCTTCCEEHHHHHTHHHHHHHHHHHHTCCCCCHHHHHHHHHHHHGGGSSSC
T ss_pred HH-HhccCHHHHHHHHHHHHHHHHHHHHHHhccCCeeHHHHHHhhhHHHHHHHHcCCCHhHHHHHHHHHHHHHHhccCCc
Confidence 99 89999999998887665 000000 000 001
Q ss_pred -chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 163 -TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 163 -~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
.....+..++.+.+.+++.++|+++++ +..+|+++.|+++..++ .+|++|+.+++.++++||+
T Consensus 172 ~~~~~~~~~~~~~~l~~~~~~~i~~rr~-----~~~~dll~~Ll~~~~~~----~ls~~el~~~~~~l~~AG~ 235 (394)
T 2wiy_A 172 ADGDVDRAAVAFGYLSARVAEMLEDKRV-----NPGDGLADSLLDAARAG----EITESEAIATILVFYAVGH 235 (394)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHH-----SCCSSHHHHHHHHHHTT----SSCHHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhc-----CCCCcHHHHHHHhhhcC----CCCHHHHHHHHHHHHHhhh
Confidence 112344556677888899999998876 23468999999876543 3999999999999999997
No 69
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.58 E-value=1.6e-14 Score=114.63 Aligned_cols=173 Identities=11% Similarity=0.095 Sum_probs=117.8
Q ss_pred CCChHHHHHHHHHhhC-CeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHH
Q 026656 50 YSNPQNYFWRLSKQYG-PMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREI 128 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~ 128 (235)
..+++..+.++++..+ ++++.-.+ ...++|++++++++|+++. ..|++......... ......++...||++|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~-gg~W~vtr~~dv~~vl~d~-~~fs~~~~~~~~~~-~~~~~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFT-GGHWIATNGDTVKEVYSDP-TRFSSEVIFLPKEA-GEKAQMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESST-TSEEEECSHHHHHHHHTCT-TTEESSCCSSSTTS-SCSSCTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCC-CCEEEECCHHHHHHHHcCc-hhccCCCccccccc-ccccccCcccCCcHHHHHH
Confidence 4578888888876543 45544222 3578999999999999754 46765433211111 1112233344479999999
Q ss_pred HHHHHHhhcchhhhhhcccchh--------------------------------ccc-----------cccccc-----c
Q 026656 129 RKICVVHLFNSNRVQSFRPIRE--------------------------------DYF-----------PSIGWV-----D 160 (235)
Q Consensus 129 R~~~~~~~f~~~~l~~~~~~~~--------------------------------~~~-----------p~~~~~-----~ 160 (235)
|+++ +++|++++++.+.+.+. .++ .+...+ .
T Consensus 113 Rrll-~~~Fs~~~l~~~~~~i~~~~~~lld~l~~~g~~D~v~~~a~~l~~~vi~~llg~~~~d~~~~~~~~~~~~~~~~~ 191 (417)
T 4dxy_A 113 RKAL-DKGLNLAKIRKVEDKVREVASSLIDSFAARGECDFAAEYAELFPVHVFMALADLPLEDIPVLSEYARQMTRPEGN 191 (417)
T ss_dssp HHHH-HHHHCHHHHHTTHHHHHHHHHHHHHHHHTTSEEEHHHHTTTTHHHHHHHHHTTCCGGGHHHHHHHHHHHHSCCCS
T ss_pred HHHh-hhhcCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeHHHHHhhhHHHHHHHHcCCCHHHHHHHHhhhhhhcccccc
Confidence 9999 89999999999988776 000 000000 0
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 161 NITGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
...........+.+.+.+++.+++++|++ +..+|+++.|+.+..++ ..++++++.+++.++++||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~li~~rr~-----~~~ddl~s~L~~~~~~~---~~~~~~e~~~~~~~ll~AG~ 257 (417)
T 4dxy_A 192 TPEEMATDLEAGNNGFYAYVDPIIRARVG-----GDGDDLITLMVNSEING---ERIAHDKAQGLISLLLLGGL 257 (417)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCCCSHHHHHHTCEETT---EECCHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCccchhhhhccccccC---CccchhHHHHHHHHHHhhcc
Confidence 01122345566778899999999999876 45679999999876544 36999999999999999996
No 70
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.58 E-value=8e-16 Score=124.82 Aligned_cols=122 Identities=12% Similarity=0.172 Sum_probs=83.7
Q ss_pred cccCCCCCCCCCCccccccccCCC----CCChHHHHHHHHHhhCC-eEEEEeCCccE-------EEecCHHHHHHHHHhc
Q 026656 26 TIKSIALPPGPRGLPFIGNLHQFD----YSNPQNYFWRLSKQYGP-MVSLRLGSVPI-------LVVSSAKMAEEVLKTH 93 (235)
Q Consensus 26 ~~~~~~~~pgp~~~p~~G~~~~~~----~~~~~~~~~~~~~~yg~-v~~~~~~~~~~-------v~i~d~~~i~~il~~~ 93 (235)
...+.+.||||.++|++|++..+. .++++.++.++.++||+ ||++++++.++ +++++++..+.++.+.
T Consensus 23 ~~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~ 102 (495)
T 3dsk_A 23 KDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVD 102 (495)
T ss_dssp -CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeecccc
Confidence 445778899999999999987664 57899999999999999 99999988777 6677777766655331
Q ss_pred C----ccCCCCCchhHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh
Q 026656 94 D----LQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE 150 (235)
Q Consensus 94 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~ 150 (235)
. +.+........ ..+...+...++..+|+.|+++|+++ .+.|+... +.+.+.+.
T Consensus 103 ~v~k~~~~~~~~~~~~-~l~g~~~~~~~~~~~g~~h~~~R~~~-~~~f~~~~-~~~~~~i~ 160 (495)
T 3dsk_A 103 KVEKKDLLTGTYMPST-ELTGGYRILSYLDPSEPKHEKLKNLL-FFLLKSSR-NRIFPEFQ 160 (495)
T ss_dssp TEECSSCTTSSSCCCG-GGGTTCCCGGGCCTTSHHHHHHHHHH-HHHHHHTT-TTHHHHHH
T ss_pred cccccccccccCCCCc-cccCCCcceeeeCCCchHHHHHHHHH-HHHHHHHH-HHHHHHHH
Confidence 1 12212111111 22221122333445699999999999 89998754 66666554
No 71
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.56 E-value=2.3e-15 Score=119.43 Aligned_cols=108 Identities=17% Similarity=0.253 Sum_probs=73.8
Q ss_pred CCccccccc---cCCCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhH---HHHhh
Q 026656 37 RGLPFIGNL---HQFDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLS---QQKVS 110 (235)
Q Consensus 37 ~~~p~~G~~---~~~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~---~~~~~ 110 (235)
.++|.+|-- ..+ ..|++..+.++++ +|||+++ .+.++++|++++++++++++. ..|++...... .....
T Consensus 18 ~~~P~~~~dp~~~~~-~~dP~~~~~~lR~-~gPV~~~--~~~~~~~vt~~~~v~~vl~d~-~~fs~~~~~~~~~~~~~~~ 92 (412)
T 4dnj_A 18 AGVPHLGIDPFALDY-FADPYPEQETLRE-AGPVVYL--DKWNVYGVARYAEVYAVLNDP-LTFCSSRGVGLSDFKKEKP 92 (412)
T ss_dssp TTSCEECCCTTSHHH-HHSCHHHHHHHHH-HCSSEEE--TTTTEEEECSHHHHHHHHTCT-TTEESTTCSSSSCTTTSCC
T ss_pred CCCCccCCCCCCHHH-HhCcHHHHHHHHh-cCCEEEE--CCCCEEEECCHHHHHHHHcCC-ccccCCCcccccccccccc
Confidence 356766521 122 4688999999865 6999865 566789999999999999754 44544322111 11111
Q ss_pred cCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh
Q 026656 111 YNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE 150 (235)
Q Consensus 111 ~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~ 150 (235)
....+.++..||++|+++|+++ +++|++++++.+.+.+.
T Consensus 93 ~~~~~~~~~~Dg~~H~r~R~~~-~~~Fs~~~l~~~~~~i~ 131 (412)
T 4dnj_A 93 WRPPSLILEADPPAHTRTRAVL-SKVLSPATMKRLRDGFA 131 (412)
T ss_dssp SSCCCTTTTCCTTHHHHHHHHH-HHHTCHHHHHHHHHHHH
T ss_pred ccCCCccccCChHHHHHHHhhc-ccccCHHHHHHhhHHHH
Confidence 1123334455799999999999 89999999999988776
No 72
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.53 E-value=9.9e-15 Score=115.20 Aligned_cols=165 Identities=10% Similarity=0.060 Sum_probs=110.5
Q ss_pred CCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHhcCccCC-C-CCch--hHHH--Hhhc-CCcceeecCC
Q 026656 50 YSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKTHDLQFC-S-RPAL--LSQQ--KVSY-NGLDVAFAPY 121 (235)
Q Consensus 50 ~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~~~~~~~ 121 (235)
..+++..+.+| ++||||+++++ ++.+.|+++||+++++++.++ .|+ + ++.. .... .+.. .+.+++++
T Consensus 15 ~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 89 (396)
T 1n40_A 15 GDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDR--RFSMKETAAAGAPRLNALTVPPEVVNNMGNI-- 89 (396)
T ss_dssp SSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCT--TEESGGGGSTTCCCSSCCSSCGGGGGHHHHH--
T ss_pred ccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCC--CcccccCccccccccccccCCchhhhhhhhH--
Confidence 57889999999 99999999997 788899999999999999764 355 4 3321 1000 0000 13445433
Q ss_pred CHHHHHHHHHHHHhhcchhhhhhcccchh-----------------ccccccc-c-------------------------
Q 026656 122 NAYWREIRKICVVHLFNSNRVQSFRPIRE-----------------DYFPSIG-W------------------------- 158 (235)
Q Consensus 122 g~~w~~~R~~~~~~~f~~~~l~~~~~~~~-----------------~~~p~~~-~------------------------- 158 (235)
+|+++|+.+ ++.|++. ++.+.+.+. ++...+. .
T Consensus 90 --~h~~~R~~~-~~~fs~~-~~~~~~~i~~~~~~l~~~l~~~~~~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~ 165 (396)
T 1n40_A 90 --ADAGLRKAV-MKAITPK-APGLEQFLRDTANSLLDNLITEGAPADLRNDFADPLATALHCKVLGIPQEDGPKLFRSLS 165 (396)
T ss_dssp --HHTTCHHHH-HHHTSSC-STTHHHHHHHHHHHHHHHHHHHCSCEETTTTTHHHHHHHHHHHHHTCCGGGHHHHHHTHH
T ss_pred --HHHHHHHHH-HHhhChH-HHHhHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHhHHHHHHHHhCCChhhHHHHHHHHH
Confidence 999999999 8999998 888877665 1110000 0
Q ss_pred -ccC-cc-hHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHh-h-hcCCCCCCCHHHHHHHHHHHhccc
Q 026656 159 -VDN-IT-GMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIW-K-QRGSKVDITWDHIKAVLMVKFHNQ 233 (235)
Q Consensus 159 -~~~-~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~-~-~~~~~~~ls~~~i~~~~~~~~~AG 233 (235)
+.. .. ...++..++.+.+ +++.++|+ + . +.++|+++.|+++. + ++ ..++++++.+++.++++||
T Consensus 166 ~~~~~~~~~p~~~~~~~~~~~-~~~~~~i~---~---~-~~~~dll~~ll~~~~~~~~---~~l~~~~i~~~~~~~~~AG 234 (396)
T 1n40_A 166 IAFMSSADPIPAAKINWDRDI-EYMAGILE---N---P-NITTGLMGELSRLRKDPAY---SHVSDELFATIGVTFFGAG 234 (396)
T ss_dssp HHTBCCSSCCHHHHHHHHHHH-HHHHHHHH---C---T-TCCSHHHHHHHHHHTSGGG---TTSCHHHHHHHHHHHHHHH
T ss_pred HHhccccCCCHHHHHHHHHHH-HHHHHHHh---C---C-CCCCCHHHHHHHhhccccc---CCCCHHHHHHHHHHHHHHh
Confidence 000 00 0113445556666 77777776 1 1 23579999999875 2 22 3599999999999999999
Q ss_pred C
Q 026656 234 Y 234 (235)
Q Consensus 234 ~ 234 (235)
+
T Consensus 235 ~ 235 (396)
T 1n40_A 235 V 235 (396)
T ss_dssp H
T ss_pred h
Confidence 5
No 73
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.49 E-value=8.2e-14 Score=108.87 Aligned_cols=158 Identities=11% Similarity=0.105 Sum_probs=106.0
Q ss_pred hHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCc-hh-HH-----H-HhhcC--CcceeecCCC
Q 026656 53 PQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA-LL-SQ-----Q-KVSYN--GLDVAFAPYN 122 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~-~~-~~-----~-~~~~~--~~~~~~~~~g 122 (235)
++..+.++ ++||||+++. | .++++||+++++++.++ ..|++++. .. .. . .+.+. +.++++. +|
T Consensus 1 p~~~~~~l-r~~gpv~~~~--g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-dg 73 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG--K--VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTS-DP 73 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS--S--SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGC-CT
T ss_pred CCHHHHHH-HHcCCceeeC--C--EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccC-Cc
Confidence 35667777 5799999986 3 89999999999999865 46777642 11 11 1 11110 1566555 69
Q ss_pred HHHHHHHHHHHHhhcchhhhhhcccchh--------------cccccc-ccc---------cCc----------------
Q 026656 123 AYWREIRKICVVHLFNSNRVQSFRPIRE--------------DYFPSI-GWV---------DNI---------------- 162 (235)
Q Consensus 123 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~--------------~~~p~~-~~~---------~~~---------------- 162 (235)
+.|+++|+++ ++.|++.+++. +.+. ++...+ ..+ ...
T Consensus 74 ~~h~~~R~~~-~~~fs~~~l~~--~~i~~~~~~l~~~l~g~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~~ 150 (367)
T 3b4x_A 74 PLHDELRNLT-ADAFNPSNLPV--DFVREVTVKLLSELDEEFDVIESFAIPLPILVISKMLGINPDVKKVKDWSDLVALR 150 (367)
T ss_dssp THHHHHHHTT-GGGGSGGGSCH--HHHHHHHHHHHHTCCSEEEHHHHTTTHHHHHHHHHHHTCCCCHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHH-HHhcCHhhhcc--hHHHHHHHHHHHhccCCcchHHHHHHhhHHHHHHHHcCCCCcHHHHHHHHHHHHhc
Confidence 9999999999 89999988875 3332 000000 000 000
Q ss_pred ----chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 163 ----TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 163 ----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
+...+.. ++.+.+.+++.++|+++++ +.++|+++.|+++ .+|++|+.+++.++++||+
T Consensus 151 ~~~~p~~~~~~-~~~~~~~~~~~~~i~~r~~-----~~~~dll~~ll~~--------~ls~~el~~~~~~l~~AG~ 212 (367)
T 3b4x_A 151 LGRADEIFSIG-RKYLELISFSKKELDSRKG-----KEIVDLTGKIANS--------NLSELEKEGYFILLMIAGN 212 (367)
T ss_dssp TTSTTGGGCCC-HHHHHHHHHHHHHHHHHTT-----TCCSSHHHHHHTS--------SSCHHHHHHHHHHHHHTTT
T ss_pred cCCChhhHHHH-HHHHHHHHHHHHHHHHHhc-----CCCCCHHHHHHhc--------cCCHHHHHHHHHHHHHhhh
Confidence 0000111 4566788888999988876 2457999999976 2899999999999999996
No 74
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.49 E-value=9.7e-14 Score=111.92 Aligned_cols=122 Identities=14% Similarity=0.208 Sum_probs=80.2
Q ss_pred cccCCCCCCCCCCccccccccCCC----CC-ChHHHHHHHHHhhCC-eEEEEeCC-------ccEEEecCHHHHHHHHHh
Q 026656 26 TIKSIALPPGPRGLPFIGNLHQFD----YS-NPQNYFWRLSKQYGP-MVSLRLGS-------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 26 ~~~~~~~~pgp~~~p~~G~~~~~~----~~-~~~~~~~~~~~~yg~-v~~~~~~~-------~~~v~i~d~~~i~~il~~ 92 (235)
...|.+.||||.++|++|++..+. .. +++.++.+++++||+ ||++++++ ...|++.|.+..+.++..
T Consensus 4 ~~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~ 83 (473)
T 3dan_A 4 SSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDV 83 (473)
T ss_dssp GGSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCT
T ss_pred CCCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCC
Confidence 346778899999999999997642 45 789999999999999 99999863 345555666554444421
Q ss_pred ----cCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhhhhhcccchh
Q 026656 93 ----HDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNRVQSFRPIRE 150 (235)
Q Consensus 93 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~ 150 (235)
+...+...... ......+.....+...+|+.|+++|+++ ++.|++. ++.+.+.+.
T Consensus 84 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~h~~~R~~~-~~~f~~~-~~~~~~~i~ 142 (473)
T 3dan_A 84 SKVEKKDLFTGTYMP-STKLTGGYRVLSYLDPSEPRHAQLKNLL-FFMLKNS-SNRVIPQFE 142 (473)
T ss_dssp TTEECSSCTTSSSCC-CGGGGTTSCCGGGCCTTSHHHHHHHHHH-HHHHHHH-HHHHHHHHH
T ss_pred cceeccccccccccC-CccccCCCcceeeeCCCcHHHHHHHHHH-HHHHHHH-HHHHHHHHH
Confidence 11122221111 1122211112333445699999999999 8999984 777777665
No 75
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.46 E-value=4e-13 Score=105.00 Aligned_cols=156 Identities=13% Similarity=0.215 Sum_probs=102.2
Q ss_pred hHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCc--hhHHH-----H--hhc-CCcceeecCCC
Q 026656 53 PQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPA--LLSQQ-----K--VSY-NGLDVAFAPYN 122 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~--~~~~~-----~--~~~-~~~~~~~~~~g 122 (235)
++..+.++ ++||||+++ + +.++++||+++++++.+. ..|++++. ..... . ... .|.++++. +|
T Consensus 1 p~~~~~~l-r~~Gpv~~~---g-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD---G-NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTS-DP 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC---S-SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGC-CT
T ss_pred CCHHHHHH-HhcCCeEeE---C-CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccC-CC
Confidence 35677788 589999987 3 589999999999999864 46887764 10111 1 110 12455444 69
Q ss_pred HHHHHHHHHHHHhhcchhhhhhcccchh--------cc-------cccc-c--------------------------ccc
Q 026656 123 AYWREIRKICVVHLFNSNRVQSFRPIRE--------DY-------FPSI-G--------------------------WVD 160 (235)
Q Consensus 123 ~~w~~~R~~~~~~~f~~~~l~~~~~~~~--------~~-------~p~~-~--------------------------~~~ 160 (235)
++|+++|+++ +++|++.+++.+.+.+. .+ ...+ . .+.
T Consensus 74 ~~h~~~R~~~-~~~f~~~~~~~~~~~i~~~~~~l~~~l~~g~~d~~~~~~~~~~~~vi~~~~G~~~~~~~~~~~~~~~~~ 152 (368)
T 1io7_A 74 PLHDELRSMS-ADIFSPQKLQTLETFIRETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDLVA 152 (368)
T ss_dssp THHHHHHGGG-TTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSEEHHHHTTTHHHHHHHHHHHTCCGGGHHHHHHHGGGCT
T ss_pred hHHHHHHHHH-HhhcCHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 9999999999 89999988888766554 00 0000 0 000
Q ss_pred C-c--chHHHHHHHHHHHHHHHHHHHHHHhhCccCCCCCcccHHHHHHHHhhhcCCCCCCCHHHHHHHHHHHhcccC
Q 026656 161 N-I--TGMIRRLERNFKEFDAFHQELIEEHLDPARIKTDQEDIVDVLLQIWKQRGSKVDITWDHIKAVLMVKFHNQY 234 (235)
Q Consensus 161 ~-~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~AG~ 234 (235)
. . +...++..++.+.+.+++.++| +..+|+++.|+++ .++++++.+++.++++||+
T Consensus 153 ~~~~~p~~~~~~~~~~~~~~~~~~~~i----------~~~~d~l~~ll~~--------~l~~~ei~~~~~~l~~AG~ 211 (368)
T 1io7_A 153 FRLGKPGEIFELGKKYLELIGYVKDHL----------NSGTEVVSRVVNS--------NLSDIEKLGYIILLLIAGN 211 (368)
T ss_dssp TSCCCTTCHHHHHHHHHHHHHHHHHHT----------TSSCHHHHHHHTS--------SCCHHHHHHHHHHHHHTTH
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHh----------CCCCCHHHHHHhc--------cCCHHHHHHHHHHHHHhhh
Confidence 0 0 0011234445555666666655 1246899999865 2899999999999999995
No 76
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.37 E-value=4.7e-13 Score=103.62 Aligned_cols=78 Identities=18% Similarity=0.224 Sum_probs=58.9
Q ss_pred HhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCCchhHHHHhhcCCcceeecCCCHHHHHHHHHHHHhhcchhh
Q 026656 62 KQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRPALLSQQKVSYNGLDVAFAPYNAYWREIRKICVVHLFNSNR 141 (235)
Q Consensus 62 ~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~ 141 (235)
++||||+++ | .|+++||+++++++.++ ..|++++....... .+.++++. +|++|+++|+.+ +++|++.+
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~---~~~~l~~~-~g~~~~~~R~~~-~~~fs~~~ 70 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMND-KIFSSNPGNRYSNA---GGISFITM-DNPEHKEFRDIS-APYFLPSK 70 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCT-TTEESSCSSCCC------CCGGGGC-CHHHHHHHHHHH-HHHHSHHH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhCh-hhcccCCcCCCCCc---cccccccC-CchHHHHHHHHh-hhhcCHHH
Confidence 579999986 3 89999999999999865 46777652111111 25666554 699999999999 89999999
Q ss_pred hhhcccchh
Q 026656 142 VQSFRPIRE 150 (235)
Q Consensus 142 l~~~~~~~~ 150 (235)
++.+.+.+.
T Consensus 71 l~~~~~~i~ 79 (343)
T 2rfb_A 71 INDYKDFIE 79 (343)
T ss_dssp HGGGHHHHH
T ss_pred HHHHHHHHH
Confidence 999887766
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=96.68 E-value=0.00042 Score=54.09 Aligned_cols=62 Identities=19% Similarity=0.236 Sum_probs=46.9
Q ss_pred CCCC-CCCccccccccC-----CCCCChHHHHHHHHHhhCCeEEEEeCCccEEEecCHHHHHHHHHhcCccCCCCC
Q 026656 32 LPPG-PRGLPFIGNLHQ-----FDYSNPQNYFWRLSKQYGPMVSLRLGSVPILVVSSAKMAEEVLKTHDLQFCSRP 101 (235)
Q Consensus 32 ~~pg-p~~~p~~G~~~~-----~~~~~~~~~~~~~~~~yg~v~~~~~~~~~~v~i~d~~~i~~il~~~~~~~~~~~ 101 (235)
.||| ++++|++|+... + ..+++..+.+++++ ||+++. .+.+++++++++++|+++ ..|++++
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~-~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d--~~f~~~~ 102 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGH-DDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDD--PAFTRAT 102 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTC-CSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHC--SSEESSC
T ss_pred CCCcccccccccCCchhhcCchh-ccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcC--CCcCCCc
Confidence 4566 446799997633 3 56899999999876 998763 468999999999999986 3566653
No 78
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=82.01 E-value=6.5 Score=23.89 Aligned_cols=50 Identities=12% Similarity=0.225 Sum_probs=36.3
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHhc
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~~ 93 (235)
++|++.. .-....+.+++.+||+|..+.+. |.-.|...+++.+..++..+
T Consensus 15 fV~~Lp~---~~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~~ 72 (103)
T 1s79_A 15 YIKGFPT---DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 72 (103)
T ss_dssp EEECCCT---TCCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTSS
T ss_pred EEECCCC---CCCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHcC
Confidence 4677653 23356688899999999888754 33567788999999998643
No 79
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.10 E-value=3.7 Score=24.81 Aligned_cols=52 Identities=27% Similarity=0.308 Sum_probs=38.7
Q ss_pred cccccccCCCCC-ChHHHHHHHHHhhC-CeEEEEeCCccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYS-NPQNYFWRLSKQYG-PMVSLRLGSVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~-~~~~~~~~~~~~yg-~v~~~~~~~~~~v~i~d~~~i~~il~~ 92 (235)
-.++|+..-... .....+.+++.+|| +|..+ .+|.-.|...+.+.+...+..
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~ 65 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKR 65 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHH
Confidence 347888764221 22345789999995 99888 568889999999999888853
No 80
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=78.16 E-value=8.5 Score=22.88 Aligned_cols=50 Identities=18% Similarity=0.193 Sum_probs=35.5
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~ 91 (235)
|-++||+.. +--...+.+++.+||+|..+++. |.-.|-..+++.+..+..
T Consensus 9 wL~VgNL~~---~~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 9 WLLLKNLTA---QIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp EEEEECCCT---TCCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred eEEEeCCCc---cCCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 455788764 33357789999999999988753 334666778877776664
No 81
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=77.66 E-value=8.2 Score=22.60 Aligned_cols=52 Identities=15% Similarity=0.271 Sum_probs=36.2
Q ss_pred CCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC----CccEEEecCHHHHHHH
Q 026656 35 GPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----SVPILVVSSAKMAEEV 89 (235)
Q Consensus 35 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~d~~~i~~i 89 (235)
-|+..-++|++.. .--...+.+++.+||+|..+.+. |...|-..+++.++.+
T Consensus 9 ~~~~~l~V~~Lp~---~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 9 HHGSKVFVGRCTE---DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp --CCEEEEESCCT---TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEeCCCC---CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 3334455787764 33456788999999999998865 4457778899988854
No 82
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=77.02 E-value=8 Score=21.96 Aligned_cols=51 Identities=16% Similarity=0.202 Sum_probs=36.4
Q ss_pred ccccccCCCCCC----hHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSN----PQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~----~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~ 92 (235)
++||++.- ..+ ....+.+++.+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 5 ~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCC-CTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCC-cHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 35676543 222 457788999999999888765 3346777899999988853
No 83
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=74.34 E-value=7.9 Score=21.47 Aligned_cols=41 Identities=10% Similarity=0.265 Sum_probs=30.4
Q ss_pred hHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHhc
Q 026656 53 PQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~~ 93 (235)
....+.+++.+||++..+.+. |.-.|-..+++.++.++..+
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 61 (75)
T 1iqt_A 12 PEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKK 61 (75)
T ss_dssp CHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTS
T ss_pred CHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhC
Confidence 356688888999998887653 23457778999999988643
No 84
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=72.88 E-value=14 Score=22.67 Aligned_cols=57 Identities=23% Similarity=0.413 Sum_probs=40.6
Q ss_pred CCCCCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC------CccEEEecCHHHHHHHHH
Q 026656 32 LPPGPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 32 ~~pgp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~d~~~i~~il~ 91 (235)
.||.|...-++||+..- -....+.+++.+||+|..+.+. |.-.|-..+++.+..++.
T Consensus 3 ~~~~~~~~l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK---ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTT---CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 45555555567887643 3356688889999999888762 345777889998888876
No 85
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=69.01 E-value=16 Score=21.98 Aligned_cols=53 Identities=15% Similarity=0.190 Sum_probs=38.4
Q ss_pred ccccccccCCCCCC----hHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSN----PQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~----~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- ..+ ....+.+++.+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 17 ~l~V~nLp~~-~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~ 80 (105)
T 2nlw_A 17 VIVVDNVPQV-GPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 80 (105)
T ss_dssp EEEEESCCCC-CTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHH
T ss_pred EEEEeCCCcc-hhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 4467888753 222 467789999999999988765 3446777888888888764
No 86
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=67.14 E-value=19 Score=22.12 Aligned_cols=50 Identities=4% Similarity=-0.019 Sum_probs=36.5
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|...+++.++.++..
T Consensus 19 l~V~nLp~~---~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~ 70 (115)
T 3beg_B 19 VVVSGLPPS---GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 70 (115)
T ss_dssp EEEEECCSS---CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 356787643 2345577888999999888764 4567778899999988863
No 87
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=65.60 E-value=21 Score=21.89 Aligned_cols=53 Identities=13% Similarity=0.194 Sum_probs=38.3
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHH
Q 026656 36 PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 36 p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~ 91 (235)
|...-++||+..- --...+.+++.+||+|..+.+. |.-.|-..+.+.+..++.
T Consensus 15 ~~~~LfV~nLp~~---vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 15 PSRVIHIRKLPID---VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCEEEECSCCTT---SCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 3334457887642 3356688999999999888754 345778889998888886
No 88
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=62.95 E-value=25 Score=22.03 Aligned_cols=50 Identities=12% Similarity=0.163 Sum_probs=36.3
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+..- --...+.+++.+||.|..+.+. +.-.|-..+.+.+..++.
T Consensus 33 ~LfVgNLp~~---vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 33 VIHIRKLPID---VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp EEEEESCCTT---CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 4457887642 3356688999999998887754 345677778888888875
No 89
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=61.10 E-value=29 Score=22.00 Aligned_cols=53 Identities=13% Similarity=0.248 Sum_probs=36.3
Q ss_pred cccccccCCCC-CChHHHHHHHHHhhCCeEEEEeC------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDY-SNPQNYFWRLSKQYGPMVSLRLG------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..-.. .+....+.+++.+||+|..+.+. |.-.|...+++.+..++..
T Consensus 32 LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~ 91 (127)
T 2a3j_A 32 VLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEA 91 (127)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHH
Confidence 45688764311 12233466889999999888763 3457888899999888854
No 90
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=60.13 E-value=27 Score=21.47 Aligned_cols=51 Identities=14% Similarity=0.079 Sum_probs=37.2
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhC-CeEEEEeC-----CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYG-PMVSLRLG-----SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg-~v~~~~~~-----~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+.. .--.+.+.+++.+|| .|..+.+. |...|-..+++.++.++..
T Consensus 30 ~l~VgnLp~---~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPE---GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSC---CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC---CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 345688764 334667889999999 78777663 4467888899999988854
No 91
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=60.01 E-value=36 Score=22.82 Aligned_cols=48 Identities=10% Similarity=0.144 Sum_probs=34.9
Q ss_pred cccccCCCCCChHHHHHHHHHhhCCeEEEEeC-----CccEEEecCHHHHHHHHHh
Q 026656 42 IGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-----SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 42 ~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-----~~~~v~i~d~~~i~~il~~ 92 (235)
+||+.. .--...+.+++.+||.|.++.+. +.-.|-..|.+.+.++...
T Consensus 51 VgNL~~---~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 51 VENLFY---PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp ECSCCS---CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EeCcCC---CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 677753 33456688999999999888763 2356777899888888764
No 92
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=59.35 E-value=28 Score=21.28 Aligned_cols=50 Identities=14% Similarity=0.326 Sum_probs=36.3
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .--...+.+++.+||+|..+.+. |.-.|...+++.++.++..
T Consensus 9 lfV~nL~~---~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 9 VTFARLND---NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEESCCT---TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEECCCC---CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 34677763 23466788999999999887653 1236788899999988864
No 93
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=59.10 E-value=24 Score=20.57 Aligned_cols=54 Identities=11% Similarity=0.271 Sum_probs=36.0
Q ss_pred ccccccccCCCC-CChHHHHHHHHHhhCCeEEEEeC------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDY-SNPQNYFWRLSKQYGPMVSLRLG------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..-.. .+....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 345677764311 12223444899999999888764 4457788899999888863
No 94
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=58.99 E-value=25 Score=21.82 Aligned_cols=61 Identities=8% Similarity=0.059 Sum_probs=38.5
Q ss_pred CCCCCCCccccccccCCCC-------CChHHHHHHHHHhhCCeEEEEeC-----CccEEEecCHHHHHHHHHh
Q 026656 32 LPPGPRGLPFIGNLHQFDY-------SNPQNYFWRLSKQYGPMVSLRLG-----SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 32 ~~pgp~~~p~~G~~~~~~~-------~~~~~~~~~~~~~yg~v~~~~~~-----~~~~v~i~d~~~i~~il~~ 92 (235)
.+|.|..+-++-|+..... .+...-+.+.+.+||.|..+.+. |.-.|-..+++.+..++..
T Consensus 2 ~~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~ 74 (114)
T 3s6e_A 2 VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNA 74 (114)
T ss_dssp CCCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHH
T ss_pred CCCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHH
Confidence 3566666666777765421 12233456667789999888763 3345667788888877754
No 95
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=57.07 E-value=29 Score=20.88 Aligned_cols=50 Identities=6% Similarity=0.015 Sum_probs=37.4
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .--...+.+++.+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 18 l~V~nLp~---~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 18 VVVSGLPP---SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEESCCS---SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 35677763 23466788899999999888764 4567778899999988864
No 96
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=54.40 E-value=33 Score=20.71 Aligned_cols=56 Identities=11% Similarity=0.164 Sum_probs=39.7
Q ss_pred CCCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 35 GPRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 35 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
.|...-++||+..- .--...+.+++.+||.|..+.+. +.-.|-..+.+.+..++..
T Consensus 13 ~p~~~l~V~nLp~~--~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~~ 71 (102)
T 1x4d_A 13 ETRRVVHIMDFQRG--KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVDY 71 (102)
T ss_dssp CCCCEEEEESCCCS--SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC--cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 34444557888641 33456688899999999988864 3457888899998888753
No 97
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=54.38 E-value=35 Score=20.89 Aligned_cols=50 Identities=16% Similarity=0.267 Sum_probs=36.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 8 lfV~nLp~~---~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS---IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC---CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 356777642 3356788999999998877643 2346788899999988864
No 98
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=54.38 E-value=25 Score=19.27 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=29.2
Q ss_pred hHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 53 PQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
....+.+++.+||+|..+.+. |.-.|-..+++.++.++..
T Consensus 12 t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 60 (75)
T 2mss_A 12 TVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEI 60 (75)
T ss_dssp CHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSS
T ss_pred CHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHC
Confidence 356678888999998887653 1235667799999988753
No 99
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=54.06 E-value=32 Score=20.43 Aligned_cols=50 Identities=24% Similarity=0.177 Sum_probs=35.1
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-----C----ccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-----S----VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-----~----~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. + .-.|-..+++.+..++..
T Consensus 22 lfV~nLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQN---MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 356777643 3356788899999998887653 1 135777899999888754
No 100
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=53.69 E-value=28 Score=19.66 Aligned_cols=50 Identities=18% Similarity=0.225 Sum_probs=34.2
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 7 ~l~v~nlp~~---~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 7 GLYIRGLQPG---TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp EEEEESCCTT---CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 3446777532 3355677888899998887643 124577789988888875
No 101
>2d9o_A DNAJ (HSP40) homolog, subfamily C, member 17; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.61 E-value=34 Score=20.58 Aligned_cols=40 Identities=23% Similarity=0.456 Sum_probs=32.0
Q ss_pred hHHHHHHHHHhhCCeEEEEeC----CccEEEecCHHHHHHHHHh
Q 026656 53 PQNYFWRLSKQYGPMVSLRLG----SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~d~~~i~~il~~ 92 (235)
-...+.+++.+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 30 te~~L~~~F~~~G~V~~v~i~~~~rGfaFVeF~~~~~A~~Ai~~ 73 (100)
T 2d9o_A 30 SKDVLLRLLQKYGEVLNLVLSSKKPGTAVVEFATVKAAELAVQN 73 (100)
T ss_dssp CHHHHHHHHHTTSCEEEEEEESSSSSEEEEEESCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCEEEEEEccCCCCEEEEEECCHHHHHHHHHh
Confidence 367789999999999888874 2346778899999998875
No 102
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=53.52 E-value=35 Score=20.73 Aligned_cols=49 Identities=12% Similarity=0.117 Sum_probs=35.8
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .-....+.+++.+||+|..+.+. +.-.|...+++.++.++..
T Consensus 14 ~V~nLp~---~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~ 65 (111)
T 1whx_A 14 LAKNLPA---GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRH 65 (111)
T ss_dssp EEESCCT---TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHH
Confidence 4666653 33466788999999999988763 3356777899998888754
No 103
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=51.02 E-value=32 Score=19.52 Aligned_cols=52 Identities=17% Similarity=0.274 Sum_probs=36.0
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHhc
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~~ 93 (235)
.-++||+..- -....+.+++.+||+|..+.+. |.-.|-..+++.+..++...
T Consensus 13 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 13 KMFVGGLSWD---TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEEECCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 3456777643 3456688889999998887653 12456777999998888543
No 104
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=49.27 E-value=36 Score=19.63 Aligned_cols=54 Identities=13% Similarity=0.233 Sum_probs=36.8
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 36 PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 36 p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
|...-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 14 ~~~~l~v~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 14 PNCCLGVFGLSLY---TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp GGGCEEEESCCSS---CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCC---CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 3334456777643 3356688899999998887653 1235667899999988864
No 105
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=49.11 E-value=42 Score=20.30 Aligned_cols=59 Identities=10% Similarity=0.017 Sum_probs=36.7
Q ss_pred CCCCCccccccccCCC--CCChHHHHHHHHHhhCCeEEEEeC----------CccEEEecCHHHHHHHHHh
Q 026656 34 PGPRGLPFIGNLHQFD--YSNPQNYFWRLSKQYGPMVSLRLG----------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 34 pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~~yg~v~~~~~~----------~~~~v~i~d~~~i~~il~~ 92 (235)
+.|..+-++.|+..-. ..+...-+.+.+.+||+|..+.+. |.-.|-..+++.+..+...
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~ 75 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVD 75 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHH
Confidence 3344455677776321 234567788888999998888653 1224666788888777753
No 106
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=49.02 E-value=47 Score=20.88 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=36.1
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 48 ~l~V~nLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 48 CLGVFGLSLY---TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CBCEETCTTS---CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3456777542 3356688899999999888763 2346777899999988863
No 107
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=46.37 E-value=38 Score=23.20 Aligned_cols=50 Identities=12% Similarity=0.225 Sum_probs=35.7
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHhc
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~~ 93 (235)
++||+.. .-....+.+++.+||+|..+.+. |.-.|-..+++.+..++...
T Consensus 113 ~V~nLp~---~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 113 YIKGFPT---DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp EEECCCT---TCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred EecCCCC---cCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 4566653 34467788999999998877653 33467778999999988643
No 108
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=44.24 E-value=52 Score=21.00 Aligned_cols=49 Identities=10% Similarity=0.177 Sum_probs=34.7
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC-----ccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS-----VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~-----~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .--...+.+++.+||+|.++.+.. .-.|...+++.++.+...
T Consensus 32 ~V~NL~~---~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~~ 85 (130)
T 3zzy_A 32 IVENLFY---PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 85 (130)
T ss_dssp EEESCCS---CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHHH
T ss_pred EECCCCC---CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHHH
Confidence 3788853 233566889999999988887542 256777888888877653
No 109
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=43.81 E-value=51 Score=19.75 Aligned_cols=50 Identities=12% Similarity=0.179 Sum_probs=36.3
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+.. .--...+.+++.+||.|..+.+. +.-.|-..+.+.+..++.
T Consensus 17 ~l~V~nLp~---~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 17 VLHIRKLPG---EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp EEEEESCCT---TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 445788764 23356678899999999888754 345777789998888875
No 110
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=43.69 E-value=32 Score=20.84 Aligned_cols=47 Identities=9% Similarity=0.173 Sum_probs=32.5
Q ss_pred HHHHHHHHHhhCCeEEEEeCC-ccEEEecCHHHHHHHHHh--cCccCCCC
Q 026656 54 QNYFWRLSKQYGPMVSLRLGS-VPILVVSSAKMAEEVLKT--HDLQFCSR 100 (235)
Q Consensus 54 ~~~~~~~~~~yg~v~~~~~~~-~~~v~i~d~~~i~~il~~--~~~~~~~~ 100 (235)
..-+.+++..||.+.--|+-. .-.+++.+++.+++++.. .+..|.-+
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~i~k~~~y~i~ 78 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVNTSKYAESYRIQ 78 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHHHHHHCCSSEEE
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEE
Confidence 455778889999766556543 346788999999999973 24444433
No 111
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=43.19 E-value=68 Score=22.09 Aligned_cols=54 Identities=22% Similarity=0.372 Sum_probs=37.3
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 36 PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 36 p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
|...-++||+..- --...+.+++.+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 14 p~~tlfVgnLp~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 14 PMASLYVGDLHPD---VTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp -CCEEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCcEEEEeCCCCC---CCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3333457887642 3366788999999999887652 1246778899999988864
No 112
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=41.02 E-value=53 Score=19.14 Aligned_cols=53 Identities=11% Similarity=0.063 Sum_probs=34.9
Q ss_pred cccccccCCCC-CChHHHHHHHHHhhCCeEEEEeC------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDY-SNPQNYFWRLSKQYGPMVSLRLG------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..-.. .+....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 12 l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~~ 71 (96)
T 2dgx_A 12 VQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVNS 71 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHHH
T ss_pred EEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHHH
Confidence 35677764311 12223344899999999988764 3346777899999888763
No 113
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=40.91 E-value=44 Score=20.63 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=37.0
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHH
Q 026656 36 PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 36 p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~ 91 (235)
|...-++||+..- .--...+.+++.+||+|..+.+. +.-.|-..+.+.+..++.
T Consensus 24 p~~~l~V~NLp~~--~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 24 LGRVIHLSNLPHS--GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp CCCEEEEESCCCS--SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCc--cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 3334457887642 12345678888999998888764 334677789988888875
No 114
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=40.24 E-value=50 Score=18.60 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=34.8
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .-....+.+++.+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 9 l~v~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 9 VFVGDLSP---EITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEESCCT---TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 34677653 233566888899999988776531 235677899999988864
No 115
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=40.21 E-value=56 Score=19.24 Aligned_cols=54 Identities=11% Similarity=0.129 Sum_probs=36.8
Q ss_pred ccccccccCCCC---CChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDY---SNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~---~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||++.... ......+.+++.+||+|..+.+. |.-.|...+++.+..++..
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 73 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKS 73 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345677764310 22345688889999999888764 3346778899999988853
No 116
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=39.95 E-value=61 Score=19.53 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhCCeEEEEeC-----------CccEEEecCHHHHHHHHHh
Q 026656 54 QNYFWRLSKQYGPMVSLRLG-----------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 54 ~~~~~~~~~~yg~v~~~~~~-----------~~~~v~i~d~~~i~~il~~ 92 (235)
..-+.+.+.+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 29 ~~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~ 78 (105)
T 3v4m_A 29 VEDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQG 78 (105)
T ss_dssp HHHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHH
Confidence 34567777899999998864 2235667788888877753
No 117
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=39.66 E-value=61 Score=20.09 Aligned_cols=48 Identities=6% Similarity=0.196 Sum_probs=34.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+ . --...+.+++.+||+|..+.+. +.-.|...+.+.+..++..
T Consensus 42 lfVgnl-~----~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~ 92 (121)
T 2bz2_A 42 LYVYGE-D----MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 92 (121)
T ss_dssp EEEECS-S----CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHH
T ss_pred EEEcCC-C----CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 346773 2 3356788999999998777664 3356777899988888754
No 118
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.32 E-value=58 Score=19.15 Aligned_cols=54 Identities=13% Similarity=0.145 Sum_probs=37.0
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHh
Q 026656 36 PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 36 p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~ 92 (235)
+...-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 14 ~~~~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2d9p_A 14 QVVNLYVKNLDDG---IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTE 74 (103)
T ss_dssp SCCCEEEECCCTT---CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHH
Confidence 3334457777543 2346678888999998887654 2346777899999988863
No 119
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=39.16 E-value=63 Score=19.84 Aligned_cols=48 Identities=6% Similarity=0.160 Sum_probs=33.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHH
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~ 91 (235)
++||+.. .--...+.+++.+||+|..+.+. +.-.|...+.+.+..++.
T Consensus 40 ~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 96 (124)
T 2jwn_A 40 YVGNVDY---GSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVA 96 (124)
T ss_dssp EEEEECT---TCCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHT
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHh
Confidence 4566653 23356688899999998877652 234677889999998883
No 120
>2dit_A HIV TAT specific factor 1 variant; structural genomics, RRM_1 domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=39.13 E-value=63 Score=19.52 Aligned_cols=59 Identities=14% Similarity=0.108 Sum_probs=37.8
Q ss_pred CCCCCccccccccCCCC--CC------hHHHHHHHHHhhCCeEEEEeC-----CccEEEecCHHHHHHHHHh
Q 026656 34 PGPRGLPFIGNLHQFDY--SN------PQNYFWRLSKQYGPMVSLRLG-----SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 34 pgp~~~p~~G~~~~~~~--~~------~~~~~~~~~~~yg~v~~~~~~-----~~~~v~i~d~~~i~~il~~ 92 (235)
|.|...-++.|+..-.. .+ ....+.+.+.+||+|..+.+. |.-.|...+++.+..++..
T Consensus 12 ~~~s~~l~l~Nl~~~~~~~~~~~~~~~~e~~l~~~f~~~G~v~~v~i~~~~~~G~afV~f~~~~~A~~Ai~~ 83 (112)
T 2dit_A 12 MRHERVVIIKNMFHPMDFEDDPLVLNEIREDLRVECSKFGQIRKLLLFDRHPDGVASVSFRDPEEADYCIQT 83 (112)
T ss_dssp CCSCCEEEEESSCCTTHHHHCSHHHHHHHHHHHHHGGGTSCCSEEEEETTCTTCEEEEECSCHHHHHHHHHH
T ss_pred CCCceEEEEEcCCCHHHhccCHHHHHHHHHHHHHHHHccCCEeEEEEecCCCCEEEEEEECCHHHHHHHHHH
Confidence 44555566777744310 11 235677888999998877653 3346667788888888754
No 121
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=38.57 E-value=39 Score=19.26 Aligned_cols=47 Identities=13% Similarity=0.307 Sum_probs=33.2
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC----CccEEEecCHHHHHHHH
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----SVPILVVSSAKMAEEVL 90 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~d~~~i~~il 90 (235)
++||+..- --...+.+++.+||+|..+.+. +.-.|-..+.+.++.+.
T Consensus 9 ~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~~ 59 (88)
T 1wf0_A 9 FVGRCTGD---MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSLC 59 (88)
T ss_dssp EEESCCSS---SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHTT
T ss_pred EEeCCCCC---CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHHh
Confidence 45777532 3356688888999998888764 34577788998887643
No 122
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=38.50 E-value=75 Score=21.20 Aligned_cols=54 Identities=11% Similarity=0.171 Sum_probs=38.0
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHhcCc
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKTHDL 95 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~~~~ 95 (235)
.-++||+..- --...+.+++.+||+|..+.+. |.-.|...+++.+..++..+..
T Consensus 15 ~l~V~nLp~~---~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~~ 77 (196)
T 1l3k_A 15 KLFIGGLSFE---TTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPH 77 (196)
T ss_dssp EEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCSC
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCCC
Confidence 3456777643 3356688899999998777642 1346788899999999976433
No 123
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=37.62 E-value=98 Score=21.28 Aligned_cols=51 Identities=8% Similarity=0.166 Sum_probs=37.0
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC----CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+... .--...+.+++.+||+|..+.+. |.-.|...+++.+..++.
T Consensus 6 ~l~V~nL~~~--~~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 6 VLMVYGLDQS--KMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp EEEEECCCTT--TCCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcc--cCCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 3456887621 22345688999999999998764 446788889999988875
No 124
>2jvo_A Nucleolar protein 3; nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding, rRNA processing; NMR {Saccharomyces cerevisiae} PDB: 2osq_A
Probab=37.53 E-value=67 Score=19.32 Aligned_cols=49 Identities=12% Similarity=0.306 Sum_probs=35.0
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEe-CCccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRL-GSVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~-~~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .--...+.+++.+||+|..+.+ -|.-.|-..+.+.+..++..
T Consensus 35 ~V~nLp~---~~t~~~L~~~F~~~G~i~~v~i~kg~afV~f~~~~~A~~Ai~~ 84 (108)
T 2jvo_A 35 FVRPFPL---DVQESELNEIFGPFGPMKEVKILNGFAFVEFEEAESAAKAIEE 84 (108)
T ss_dssp EECSSCT---TCCHHHHHHHHTTTSCCCEEEEETTEEEEECSSHHHHHHHHHH
T ss_pred EEECCCC---CCCHHHHHHHHHhcCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 4666653 2335668889999999877765 34556777899999888863
No 125
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=37.40 E-value=61 Score=18.80 Aligned_cols=38 Identities=21% Similarity=0.244 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhCCe---EEEEeCCccEEEecC-----HHHHHHHHH
Q 026656 54 QNYFWRLSKQYGPM---VSLRLGSVPILVVSS-----AKMAEEVLK 91 (235)
Q Consensus 54 ~~~~~~~~~~yg~v---~~~~~~~~~~v~i~d-----~~~i~~il~ 91 (235)
.+..++++++|.++ +++..++.+.+.|++ -+.+.++++
T Consensus 23 ~EL~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g~~k~dKe~i~eiLq 68 (81)
T 1ghh_A 23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQ 68 (81)
T ss_dssp HHHHHHHHHHCSSSCCEEEEEEESSCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCceEEEeecCCCceeecCCChhHHHHHHHHHH
Confidence 35567888889884 899888888887643 455555554
No 126
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=37.33 E-value=62 Score=18.87 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=33.8
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEE--------EEeC---------CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVS--------LRLG---------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~--------~~~~---------~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+..- --...+.+++.+||.+.. +.+. |.-.|...+.+.+..++.
T Consensus 15 ~l~V~nLp~~---~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 15 TIFVQGLGEN---VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp EEEEECCCSS---CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 3457777642 335668888999998765 4432 123567789999988885
No 127
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=37.22 E-value=65 Score=19.10 Aligned_cols=56 Identities=14% Similarity=0.136 Sum_probs=37.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEE-EEeC--------CccEEEecCHHHHHHHHHhcCccCC
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVS-LRLG--------SVPILVVSSAKMAEEVLKTHDLQFC 98 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~-~~~~--------~~~~v~i~d~~~i~~il~~~~~~~~ 98 (235)
-++|++.. .--...+.+++.+||.|.. +.+. |.-.|-..+++.++.++..+...+.
T Consensus 18 l~V~nLp~---~~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~ 82 (104)
T 1wg5_A 18 VRLRGLPF---GCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIG 82 (104)
T ss_dssp EEEESCCT---TCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSS
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhC
Confidence 35677764 3345668888899998765 4432 3357788899999999976443333
No 128
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=37.10 E-value=59 Score=18.55 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=35.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .-....+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 11 l~V~nlp~---~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~ 67 (92)
T 2dgv_A 11 IFVRNLPF---DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRM 67 (92)
T ss_dssp EEECSCCT---TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHH
Confidence 34677753 23456688899999998877653 2345677799999888764
No 129
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.06 E-value=64 Score=18.97 Aligned_cols=55 Identities=13% Similarity=0.190 Sum_probs=37.8
Q ss_pred CCCCccccccccCCCCCChHHHHHHHHHh-hCCeEEEEeC--------CccEEEecCHHHHHHHHHh
Q 026656 35 GPRGLPFIGNLHQFDYSNPQNYFWRLSKQ-YGPMVSLRLG--------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 35 gp~~~p~~G~~~~~~~~~~~~~~~~~~~~-yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~ 92 (235)
.|...-++||+..- --...+.+++.+ ||+|..+.+. +.-.|-..+++.+..++..
T Consensus 7 ~~~~~l~V~nLp~~---~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 7 GPEYSLFVGDLTPD---VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SCCCCEEEECCCTT---CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCC---CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 34344457877643 335667888888 9998877652 2346777899999998864
No 130
>3ctr_A Poly(A)-specific ribonuclease PARN; protein-RNA-complex, M7G-CAP, M7GTP, RNA recognition motif, RRM, cytoplasm, exonuclease, hydrolase, magnesium; HET: MGP; 2.10A {Homo sapiens}
Probab=37.02 E-value=31 Score=20.94 Aligned_cols=49 Identities=8% Similarity=0.148 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhCCeEEEEeCC-ccEEEecCHHHHHHHHHh--cCccCCCCCc
Q 026656 54 QNYFWRLSKQYGPMVSLRLGS-VPILVVSSAKMAEEVLKT--HDLQFCSRPA 102 (235)
Q Consensus 54 ~~~~~~~~~~yg~v~~~~~~~-~~~v~i~d~~~i~~il~~--~~~~~~~~~~ 102 (235)
..-+.+++..||.+.--|+-. .-.+++.+++.+++++.. .+..|.-+.+
T Consensus 19 t~Di~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~~i~~~~~y~i~ty 70 (101)
T 3ctr_A 19 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQTY 70 (101)
T ss_dssp HHHHHHHTTTSEEEEEEEEETTEEEEEEEEECHHHHHHHHHTTCSSCCCCCH
T ss_pred hHHHHHHHhccCCEEEEEEcCCeEEEEecCHHHHHHHHHhcccCCceEEEEh
Confidence 455778888899766556644 346788999999999973 2444554443
No 131
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=36.93 E-value=62 Score=18.79 Aligned_cols=49 Identities=6% Similarity=0.181 Sum_probs=35.1
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+ .--...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 17 ~l~V~n~-----~~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 17 TLYVYGE-----DMTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp EEEEECS-----SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEcCC-----CCCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 3456773 22356688899999999888764 3346677899999988854
No 132
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.68 E-value=61 Score=18.62 Aligned_cols=51 Identities=16% Similarity=0.273 Sum_probs=35.8
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- -....+.+++.+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 7 ~l~v~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (95)
T 2dnz_A 7 GLYVGSLHFN---ITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQ 66 (95)
T ss_dssp EEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 3346777532 33566888899999988876532 346777899999988863
No 133
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=36.60 E-value=1.5e+02 Score=23.46 Aligned_cols=51 Identities=12% Similarity=0.217 Sum_probs=36.5
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++|||..- --...+.+++.+||+|..+.+. |.-+|...+++.+..++..
T Consensus 104 ~lfV~nL~~~---~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 104 TLFVARVNYD---TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEEeCCCCC---CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 4457777543 2356688889999999888763 2356777899999988854
No 134
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=36.54 E-value=74 Score=19.56 Aligned_cols=56 Identities=13% Similarity=0.255 Sum_probs=38.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh-cCccCC
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT-HDLQFC 98 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~-~~~~~~ 98 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|...+++.+..++.. +...+.
T Consensus 25 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~ 90 (126)
T 3ex7_B 25 LFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLM 90 (126)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSS
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeC
Confidence 456777532 3356688889999999888763 2346788899999988853 333343
No 135
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=36.16 E-value=58 Score=18.19 Aligned_cols=51 Identities=10% Similarity=0.224 Sum_probs=35.8
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 9 ~l~V~nl~~~---~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 68 (85)
T 3mdf_A 9 VLYVGGLAEE---VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 68 (85)
T ss_dssp EEEEECCCTT---CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC---CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHHH
Confidence 3456777532 3356788889999999888752 2246778899999888853
No 136
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.91 E-value=72 Score=19.18 Aligned_cols=50 Identities=10% Similarity=0.165 Sum_probs=36.5
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+.. .--...+.+++.+||.|..+.+. +.-.|-..+.+.+..++.
T Consensus 17 ~l~V~nLp~---~~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 17 VVHVRGLCE---SVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp EEEEESCCS---SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCC---CCCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 445788763 23456688999999999888754 345677789988888875
No 137
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.91 E-value=67 Score=18.86 Aligned_cols=51 Identities=8% Similarity=0.113 Sum_probs=36.0
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 17 ~l~V~nlp~~---~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 17 RLHVSNIPFR---FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp EEEEESCCTT---CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 3356777532 3356688889999999888753 2346777899999988863
No 138
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=35.85 E-value=65 Score=18.65 Aligned_cols=49 Identities=10% Similarity=0.369 Sum_probs=34.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .-....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 6 ~V~nLp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 63 (96)
T 2x1f_A 6 YLGSIPY---DQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRN 63 (96)
T ss_dssp EEESCCT---TCCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCC---CCCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4566653 23356688889999999888763 2346777899999888853
No 139
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=35.77 E-value=72 Score=19.20 Aligned_cols=52 Identities=10% Similarity=0.055 Sum_probs=37.7
Q ss_pred CccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 38 GLPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 38 ~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
..-++||+..- --...+.+++.+||+|..+.+. |.-.|-..+.+.++.++..
T Consensus 22 ~~l~V~NLp~~---~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~~ 76 (100)
T 3r27_A 22 PVVHIRGLIDG---VVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVNY 76 (100)
T ss_dssp SEEEEESCCTT---CCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred cEEEEeCCCCC---CCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHHH
Confidence 34567888642 3456688999999999888753 4457777899988888753
No 140
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=35.39 E-value=73 Score=19.12 Aligned_cols=49 Identities=18% Similarity=0.391 Sum_probs=34.9
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHH
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~ 91 (235)
-++||+.. .-....+.+++.+||+|..+.+. |.-.|-..+++.+..++.
T Consensus 29 l~V~nLp~---~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 29 LYVGSLHF---NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEECCCS---SCCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 34677753 23456688888999998877653 234677789999998885
No 141
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=35.06 E-value=65 Score=18.48 Aligned_cols=49 Identities=16% Similarity=0.312 Sum_probs=34.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC--------ccEEEecCHHHHHHHHH
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS--------VPILVVSSAKMAEEVLK 91 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~--------~~~v~i~d~~~i~~il~ 91 (235)
-++||+..- -....+.+++.+||+|..+.+.. .-.|-..+++.++.++.
T Consensus 19 l~v~nlp~~---~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 19 VFVGNLEAR---VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEECCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEECCCCC---CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 346777532 33566888999999988876532 23667778888888886
No 142
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=34.82 E-value=82 Score=19.53 Aligned_cols=64 Identities=8% Similarity=0.065 Sum_probs=39.5
Q ss_pred CCCccccccccCCC--CCChHHHHHHHHHhhCCeEEEEeCC-------------ccEEEecCHHHHHHHHHh-cCccCCC
Q 026656 36 PRGLPFIGNLHQFD--YSNPQNYFWRLSKQYGPMVSLRLGS-------------VPILVVSSAKMAEEVLKT-HDLQFCS 99 (235)
Q Consensus 36 p~~~p~~G~~~~~~--~~~~~~~~~~~~~~yg~v~~~~~~~-------------~~~v~i~d~~~i~~il~~-~~~~~~~ 99 (235)
|..+-++.|+..-. ..+...-+.+.+.+||+|..+.+.- .-.|-..+++.+..+... ++..|..
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G 98 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG 98 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 33455567765321 3456777888889999988876431 224556688888877654 3334433
No 143
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.61 E-value=66 Score=18.41 Aligned_cols=51 Identities=20% Similarity=0.370 Sum_probs=36.1
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
.-+++|+.. .-....+.+++.+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 18 ~l~V~nlp~---~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 77 (94)
T 2e5h_A 18 TVYVSNLPF---SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRA 77 (94)
T ss_dssp SEEEESCCT---TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHHH
T ss_pred EEEEECCCC---CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 345677763 233566888889999998887632 346778899999888853
No 144
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=34.15 E-value=98 Score=20.23 Aligned_cols=40 Identities=18% Similarity=0.333 Sum_probs=30.6
Q ss_pred hHHHHHHHHHhhC--CeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 53 PQNYFWRLSKQYG--PMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 53 ~~~~~~~~~~~yg--~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
-...+.+++.+|| +|..+.+. |.-.|...+.+.+..++..
T Consensus 68 te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 68 TDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp CHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3566889999999 88887652 1246778899999998865
No 145
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=34.08 E-value=72 Score=18.64 Aligned_cols=48 Identities=19% Similarity=0.370 Sum_probs=33.5
Q ss_pred cccccCCCCCChHHHHHHHHHhhCCeEEEEeC----CccEEEecCHHHHHHHHHh
Q 026656 42 IGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 42 ~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~d~~~i~~il~~ 92 (235)
+||+.. .-....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 5 V~nLp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 56 (101)
T 2hvz_A 5 VGNLGT---GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVRG 56 (101)
T ss_dssp EECCCS---SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHHH
T ss_pred EeCCCC---CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHHH
Confidence 455543 23356688889999998777653 3346777899999988863
No 146
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=33.73 E-value=1.6e+02 Score=22.50 Aligned_cols=57 Identities=9% Similarity=0.011 Sum_probs=40.2
Q ss_pred CCCCCcccccccc-CCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 34 PGPRGLPFIGNLH-QFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 34 pgp~~~p~~G~~~-~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
.-|...-++||+. .+ +--.+.+.+.+.+||.|..+.+. |.-+|-..+.++++.++..
T Consensus 15 ~~ps~~l~VgN~gl~~--~~te~~L~~~F~~~G~V~~v~~~~~kgfaFV~f~~~~~A~~Ai~~ 75 (345)
T 3tht_A 15 SYATQSLVVANGGLGN--GVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 75 (345)
T ss_dssp SSCCSEEEEETCSGGG--TCCHHHHHHHHHTTSCEEEEECCTTCSEEEEEESSHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCC--CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 4454455678862 33 34567789999999999888763 3346777799888888864
No 147
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.68 E-value=70 Score=19.27 Aligned_cols=50 Identities=8% Similarity=0.039 Sum_probs=34.1
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHhc
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~~ 93 (235)
++||+.. .--...+.+++.+||+|..+.+. +.-.|-..+.+.+..++.-+
T Consensus 29 ~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~ 87 (114)
T 2cq4_A 29 FCMQLAA---RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLT 87 (114)
T ss_dssp EEESCCT---TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHT
T ss_pred EEeCCCC---CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcC
Confidence 4566653 23356688889999999888764 23456777888888777333
No 148
>1why_A Hypothetical protein riken cDNA 1810017N16; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.88 E-value=74 Score=18.43 Aligned_cols=51 Identities=12% Similarity=0.130 Sum_probs=36.3
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---ccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- --...+.+++.+||+|..+.+.. .-.|-..+.+.+..++..
T Consensus 19 ~l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~~~~~~g~afV~f~~~~~A~~A~~~ 72 (97)
T 1why_A 19 RLWVGGLGPN---TSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQAACAK 72 (97)
T ss_dssp CEEEECCCSS---CCHHHHHHHHHTTSCEEEEEECSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeeEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3456777542 33566888999999998887643 346677899998888863
No 149
>2rs2_A Musashi-1, RNA-binding protein musashi homolog 1; protein-RNA complex, RRM, RBD, RNA binding protein- complex; NMR {Mus musculus}
Probab=32.87 E-value=81 Score=18.91 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=36.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHhc
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~~ 93 (235)
-++||+.. .--...+.+++.+||+|..+.+. |.-.|...+.+.+..++...
T Consensus 28 lfV~nLp~---~~te~~L~~~F~~~G~i~~v~i~~~~~tg~~kg~afV~f~~~~~A~~Ai~~~ 87 (109)
T 2rs2_A 28 MFIGGLSW---QTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 87 (109)
T ss_dssp EEEESCCT---TCCHHHHHHHHTTTSCEEEEEECCCTTTCCCTTCEEEEESSHHHHHHHHHSS
T ss_pred EEEeCCCC---CCCHHHHHHHHHccCCeEEEEEEECCCCCCcCcEEEEEECCHHHHHHHHHHC
Confidence 34677753 23356688889999999888763 23467788999999988643
No 150
>2xnq_A Nuclear polyadenylated RNA-binding protein 3; transcription termination, RNA processi recognition, RRM; HET: CAF; 1.30A {Saccharomyces cerevisiae} PDB: 2xnr_A 2l41_A
Probab=32.76 E-value=76 Score=18.54 Aligned_cols=50 Identities=16% Similarity=0.389 Sum_probs=36.0
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~ 92 (235)
++||+..- .--...+.+++.+||+|..+.+. |.-.|-..+.+.+..++..
T Consensus 26 ~V~nLp~~--~~t~~~L~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~Ai~~ 76 (97)
T 2xnq_A 26 FIGNLPLK--NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEX 76 (97)
T ss_dssp EEESCCSS--CCCHHHHHHHHGGGSCEEEEEECSSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCcc--cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 46777630 22356688899999999888763 4456777899999988863
No 151
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=32.75 E-value=1e+02 Score=20.13 Aligned_cols=50 Identities=14% Similarity=0.255 Sum_probs=35.5
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .-....+.+++.+||+|..+.+. +.-+|-..+++.+..++..
T Consensus 75 l~V~nLp~---~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHE---EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCT---TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 35677754 23456688999999998877653 2346777899999888853
No 152
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=32.59 E-value=86 Score=19.10 Aligned_cols=50 Identities=18% Similarity=0.294 Sum_probs=35.5
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .-....+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 10 l~V~nLp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~ 67 (116)
T 2fy1_A 10 LFIGGLNR---ETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKD 67 (116)
T ss_dssp EEEECCTT---TCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHH
Confidence 34677753 23356688899999998777653 2346777899999998864
No 153
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=32.41 E-value=79 Score=18.63 Aligned_cols=50 Identities=14% Similarity=0.274 Sum_probs=35.1
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+. |.-.|-..+.+.+..++..
T Consensus 26 l~V~nlp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHEE---ATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCTT---CCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 346777542 3356688899999998888753 2235677899999888863
No 154
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=32.32 E-value=82 Score=18.76 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=35.8
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 29 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 87 (110)
T 1oo0_B 29 LFVTSIHEE---AQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 87 (110)
T ss_dssp EEEESCCTT---CCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 346777542 3356688899999999888763 2346777899999888863
No 155
>2dgu_A Heterogeneous nuclear ribonucleoprotein Q; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dk2_A
Probab=32.30 E-value=79 Score=18.59 Aligned_cols=50 Identities=12% Similarity=0.172 Sum_probs=36.5
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 14 l~V~nl~~~---~t~~~l~~~F~~~G~i~~v~~~~~~afV~f~~~~~a~~A~~~ 64 (103)
T 2dgu_A 14 LFVRNLANT---VTEEILEKAFSQFGKLERVKKLKDYAFIHFDERDGAVKAMEE 64 (103)
T ss_dssp EEEECCCTT---CCHHHHHHHHHHHSCEEEEEECSSCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEECCEEEEEeCCHHHHHHHHHH
Confidence 346777532 3356688889999999888764 4456778899999988863
No 156
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=32.16 E-value=76 Score=18.39 Aligned_cols=50 Identities=18% Similarity=0.276 Sum_probs=35.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 11 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 11 LFVRNLSYT---SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEECCCTT---CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 346776532 3356688899999999888763 2346777899999988853
No 157
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=32.01 E-value=89 Score=20.10 Aligned_cols=50 Identities=18% Similarity=0.315 Sum_probs=34.5
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHhc
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~~ 93 (235)
++||+.. .-....+.+.+.+||+|..+.+.. .-.|-..+++.+..++..+
T Consensus 91 ~V~nlp~---~~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 149 (167)
T 2cjk_A 91 FVGGIGP---DVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNK 149 (167)
T ss_dssp EEEEECT---TCCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCS
T ss_pred EECCCCC---CCCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCC
Confidence 3556543 233566888889999988776532 2457778999999988643
No 158
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.80 E-value=78 Score=18.38 Aligned_cols=56 Identities=9% Similarity=0.202 Sum_probs=38.3
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHhcCccCC
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKTHDLQFC 98 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~~~~~~~ 98 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+.+.+..++..+...+.
T Consensus 13 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~ 77 (99)
T 2dgs_A 13 IFVGGIPHN---CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIM 77 (99)
T ss_dssp EEEESCCSS---CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSS
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEEC
Confidence 346777532 3356688889999999888763 2246777899999998864443333
No 159
>2dis_A Unnamed protein product; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.24 E-value=85 Score=18.61 Aligned_cols=50 Identities=10% Similarity=0.124 Sum_probs=35.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCC-eEEEEeC----------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGP-MVSLRLG----------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~-v~~~~~~----------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .--...+.+++.+||+ |..+.+. +.-.|-..+++.+..++..
T Consensus 11 l~V~nLp~---~~t~~~l~~~f~~~G~~v~~v~i~~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 71 (109)
T 2dis_A 11 LFIGGIPK---MKKREEILEEIAKVTEGVLDVIVYASAADKMKNRGFAFVEYESHRAAAMARRK 71 (109)
T ss_dssp EEEECCCT---TSCHHHHHHHHHHHSTTEEEEECCSSSCTTTTTCCEEEEEESSHHHHHHHHTT
T ss_pred EEEeCCCC---cCCHHHHHHHHHHhcCCceEEEEEccCCCCCCcCcEEEEEecCHHHHHHHHHH
Confidence 34677753 2335667888899998 8888764 2346777899999998864
No 160
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=30.88 E-value=87 Score=18.61 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=36.5
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 17 ~l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 17 TVFIRNLSFD---SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CEEEESCCTT---CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 4457777642 3356688888999999888764 2245777899999988864
No 161
>2cq2_A Hypothetical protein LOC91801; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.76 E-value=97 Score=19.16 Aligned_cols=54 Identities=11% Similarity=0.131 Sum_probs=37.7
Q ss_pred CCCcccc--ccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---ccEEEecCHHHHHHHHHh
Q 026656 36 PRGLPFI--GNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 36 p~~~p~~--G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---~~~v~i~d~~~i~~il~~ 92 (235)
|...-++ |++.. .-..+.+.+.+.+||.|..+.+.. .-.|-..+++++++++..
T Consensus 24 pt~~L~V~Ng~L~~---~~te~~L~~~F~~fG~v~~v~i~~~rgfaFV~f~~~~~A~~Ai~~ 82 (114)
T 2cq2_A 24 ATQSLVVANGGLGN---GVSRNQLLPVLEKCGLVDALLMPPNKPYSFARYRTTEESKRAYVT 82 (114)
T ss_dssp CCSEEEEETCTGGG---TCCHHHHHHHHHHHSCEEEEECCTTCSCEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCCC---CCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 3334456 55653 233567889999999998887642 346777899988888864
No 162
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=30.64 E-value=85 Score=18.44 Aligned_cols=51 Identities=18% Similarity=0.256 Sum_probs=35.8
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 17 ~l~v~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 75 (105)
T 2dnh_A 17 KLFVGMLNKQ---QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIHA 75 (105)
T ss_dssp EEEEESCCTT---CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 3446777543 3356688899999998887653 2345677899999988853
No 163
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.52 E-value=84 Score=18.34 Aligned_cols=51 Identities=10% Similarity=0.224 Sum_probs=35.2
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 14 ~l~V~nLp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 14 VLYVGGLAEE---VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp CEEEESCCSS---CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3456777643 3356688889999998877653 1235666789999888853
No 164
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.32 E-value=79 Score=17.96 Aligned_cols=50 Identities=22% Similarity=0.361 Sum_probs=36.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 11 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~~ 61 (90)
T 2dnq_A 11 LFIGNLPRE---ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIRN 61 (90)
T ss_dssp EEEESCCSS---CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 346777542 3356688999999998888753 4456777899999988853
No 165
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=29.96 E-value=78 Score=17.80 Aligned_cols=47 Identities=11% Similarity=0.075 Sum_probs=31.9
Q ss_pred cccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHH
Q 026656 42 IGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLK 91 (235)
Q Consensus 42 ~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~ 91 (235)
+||+..- -....+.+++.+||+|..+.+.. .-.|-..+++.+..++.
T Consensus 11 V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~ 66 (89)
T 3ucg_A 11 VGNVDYG---ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLA 66 (89)
T ss_dssp EESCCTT---CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGG
T ss_pred EeCCCCC---CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHh
Confidence 4555432 23566888889999988776431 23567778888888873
No 166
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.75 E-value=86 Score=18.22 Aligned_cols=50 Identities=18% Similarity=0.195 Sum_probs=35.2
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 20 l~v~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 20 LFISGLPFS---CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp EEEESCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 346777532 3356688889999998887653 2346777899999988854
No 167
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=29.69 E-value=85 Score=18.13 Aligned_cols=50 Identities=18% Similarity=0.221 Sum_probs=35.2
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC------------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG------------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~------------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 8 l~V~nLp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 8 LFIKNLNFS---TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 346777532 3356688889999998777653 1345677899999998874
No 168
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=29.27 E-value=42 Score=14.54 Aligned_cols=14 Identities=7% Similarity=0.083 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHhcc
Q 026656 219 WDHIKAVLMVKFHN 232 (235)
Q Consensus 219 ~~~i~~~~~~~~~A 232 (235)
-+|+.++|+.-|.|
T Consensus 14 ieelldncietfva 27 (31)
T 4h62_V 14 IEELLDNCIETFVA 27 (31)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 35778888877665
No 169
>1u6f_A Tcubp1, RNA-binding protein UBP1; trypanosome, mRNA-binding protein, GU-rich RNA, structure; NMR {Trypanosoma cruzi} SCOP: d.58.7.1
Probab=28.95 E-value=1.1e+02 Score=19.17 Aligned_cols=49 Identities=14% Similarity=0.302 Sum_probs=34.5
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .-....+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 46 ~V~nLp~---~~~~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 103 (139)
T 1u6f_A 46 MVNYIPT---TVDEVQLRQLFERYGPIESVKIVCDRETRQSRGYGFVKFQSGSSAQQAIAG 103 (139)
T ss_dssp EEESCST---TCCHHHHHHHHHHHSCEEEEEEEEETTTTEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCeEEEEEEEcCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4566653 22356688889999998877653 1246777899999988864
No 170
>2cqi_A Nucleolysin TIAR; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, ST genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.83 E-value=91 Score=18.23 Aligned_cols=50 Identities=20% Similarity=0.216 Sum_probs=35.6
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 17 ~l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~ 73 (103)
T 2cqi_A 17 TLYVGNLSRD---VTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALA 73 (103)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHHHSCEEEEEEECCCCSSCCEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcc---CCHHHHHHHHHhcCCEeEEEEEecCCCCCCEEEEEECCHHHHHHHHH
Confidence 3456777532 3456688899999998887653 234677789999988886
No 171
>2dnp_A RNA-binding protein 14; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.78 E-value=84 Score=17.82 Aligned_cols=51 Identities=12% Similarity=0.173 Sum_probs=36.8
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 11 ~l~V~nlp~~---~t~~~l~~~F~~~G~v~~~~~~~~~afV~f~~~~~a~~A~~~ 62 (90)
T 2dnp_A 11 KIFVGNVSAA---CTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQ 62 (90)
T ss_dssp CEEEESCCTT---CCHHHHHHHHHHHSCEEEEEECSSCEEEEESCHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHcCCCEEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 3456777642 3356688889999999888764 3456778899999888763
No 172
>2dh8_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.64 E-value=93 Score=18.28 Aligned_cols=52 Identities=19% Similarity=0.256 Sum_probs=36.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHhcC
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKTHD 94 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~~~ 94 (235)
-++||+..- --...+.+++.+||+|..+.+.. .-.|-..+++.+..++..+.
T Consensus 19 l~V~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~g~~~g~afV~f~~~~~a~~a~~~~~ 79 (105)
T 2dh8_A 19 LFVGGLDWS---TTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRP 79 (105)
T ss_dssp ECCBSCCTT---CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSTTHHHHHHHHCS
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeeCCCCCCcceEEEEEECCHHHHHHHHHhCC
Confidence 346777532 33566888899999988776532 23567789999998887633
No 173
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.60 E-value=90 Score=18.06 Aligned_cols=54 Identities=19% Similarity=0.280 Sum_probs=36.4
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHhhCCeE-EEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 36 PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPMV-SLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 36 p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~-~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
+...-++||+..- -....+.+++.+||++. .+.+. +.-.|-..+++.+..++..
T Consensus 8 ~~~~l~V~nLp~~---~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 8 MAASLWMGDLEPY---MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp SSSEEEECSCCTT---CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred CccEEEEeCCCCC---CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 3334456777642 33566888899999987 66542 1235677899999988863
No 174
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.55 E-value=64 Score=19.37 Aligned_cols=49 Identities=8% Similarity=0.169 Sum_probs=33.3
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .--...+.+++.+||+|..+.+. |.-.|-..+.+.++.++..
T Consensus 33 ~V~nLp~---~~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 33 HVSNIPF---RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EEESCCT---TCCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EEECCCC---cCCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 4566653 23356688889999998777653 2345667788888877753
No 175
>2f3j_A RNA and export factor binding protein 2; RRM domain, RBD domain., transport protein; NMR {Mus musculus}
Probab=28.55 E-value=1.3e+02 Score=20.05 Aligned_cols=40 Identities=10% Similarity=0.104 Sum_probs=30.6
Q ss_pred hHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHh
Q 026656 53 PQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~ 92 (235)
....+.+++.+||+|..+.+. +.-.|...+++.+..++..
T Consensus 101 te~~L~~~F~~~G~I~~v~i~~d~~g~~kG~afV~F~~~~~A~~Ai~~ 148 (177)
T 2f3j_A 101 SDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHFERRADALKAMKQ 148 (177)
T ss_dssp CHHHHHHHHHHTSCCSEEEECCCTTSSCSCCEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEEEECCCCCEeeEEEEEeCCHHHHHHHHHH
Confidence 356688899999998888763 2346777899999988863
No 176
>2cpi_A CCR4-NOT transcription complex subunit 4; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.50 E-value=47 Score=20.07 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=33.9
Q ss_pred ccccccccCCCCCChHHHHH---HHHHhhCCeEEEEeC------------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFW---RLSKQYGPMVSLRLG------------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~---~~~~~yg~v~~~~~~------------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..-. ....+. +++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 17 ~l~V~nLp~~~---~~~~l~~~~~~F~~~G~i~~v~i~~~~~~~~~~~~~G~afV~f~~~~~A~~Ai~~ 82 (111)
T 2cpi_A 17 LVFVVGLSQRL---ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQC 82 (111)
T ss_dssp CEEEEEECTTT---CCHHHHHSTTTTTTTSCEEEEEEECCSSCCSSSCCCEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCCCC---CHHHHHHHHHHhhccCCEEEEEEecCCCcCccCCCCeEEEEEECcHHHHHHHHHH
Confidence 34567776431 223345 788899998887653 1345677799999988865
No 177
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=28.14 E-value=77 Score=19.13 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=34.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .--...+.+++.+||+|..+.+.. .-.|...+++.+..++..
T Consensus 31 ~V~nLp~---~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~ 88 (116)
T 1x4b_A 31 FIGGLSF---ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAA 88 (116)
T ss_dssp EEECCTT---CCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTS
T ss_pred EEeCCCC---CCCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHh
Confidence 4676653 233566888999999987776532 345677899999998865
No 178
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=28.03 E-value=74 Score=17.24 Aligned_cols=49 Identities=16% Similarity=0.153 Sum_probs=30.7
Q ss_pred cccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHhc
Q 026656 42 IGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 42 ~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~~ 93 (235)
+||+..- -....+.+.+.+||++..+.+.. .-.|-..+++.+..++...
T Consensus 5 v~nlp~~---~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~ 62 (77)
T 1uaw_A 5 IGGLSWQ---TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 62 (77)
T ss_dssp EESCCSS---CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTT
T ss_pred EeCCCCC---CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhC
Confidence 4555432 23455788889999877665421 2345556888888887644
No 179
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=27.81 E-value=98 Score=18.23 Aligned_cols=50 Identities=12% Similarity=0.084 Sum_probs=34.7
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~ 92 (235)
-+++|+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 32 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 32 LLVSNLDFG---VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 346776532 3356688889999998877643 1246677799999888863
No 180
>2adc_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 2evz_A
Probab=27.19 E-value=1.6e+02 Score=20.45 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=36.8
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC----CccEEEecCHHHHHHHHH
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~d~~~i~~il~ 91 (235)
-++||+..- .--...+.+++.+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 37 l~V~nLp~~--~~te~~L~~~F~~~G~i~~v~i~~~~~g~afV~F~~~~~A~~Ai~ 90 (229)
T 2adc_A 37 LLVSNLNPE--RVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMS 90 (229)
T ss_dssp EEEESCCTT--TCCHHHHHHHHHHHTCEEEEEECCTTSCCEEEEESCHHHHHHHHH
T ss_pred EEEeCCCcc--cCCHHHHHHHHHhCCCeEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 346777641 22356788889999999888764 445788889999998885
No 181
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=27.16 E-value=1.2e+02 Score=18.93 Aligned_cols=49 Identities=10% Similarity=0.264 Sum_probs=34.5
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .--...+.+++.+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 67 ~v~nlp~---~~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 67 YVGGLAE---EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp EEECCCT---TCCHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCC---CCCHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 3555543 23356688899999999888763 2246777899999988853
No 182
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=27.12 E-value=85 Score=17.32 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=32.9
Q ss_pred cccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 42 IGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 42 ~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
+||+.. .-....+.+++.+||++..+.+. +.-.|-..+++.+..++..
T Consensus 6 V~nlp~---~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 6 VGDLNV---NVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EECCCT---TCCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EeCCCC---CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 455543 22356678888999998877643 1246778899999988863
No 183
>1x4g_A Nucleolysin TIAR; structural genomics, RRM domain, TIA-1 related protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.12 E-value=1e+02 Score=18.29 Aligned_cols=50 Identities=10% Similarity=0.208 Sum_probs=35.9
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 28 l~V~nl~~~---~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~A~~~ 80 (109)
T 1x4g_A 28 VYCGGIASG---LTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVS 80 (109)
T ss_dssp EEEECCSSC---CCHHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 346777642 3356678888999999888764 3456777899999888853
No 184
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.01 E-value=97 Score=17.96 Aligned_cols=50 Identities=18% Similarity=0.243 Sum_probs=34.5
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
-++|++..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 18 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~ 70 (99)
T 2cpj_A 18 LFVGNLPPD---ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVE 70 (99)
T ss_dssp EEEESCCTT---CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHH
Confidence 346777542 3356688888999998887754 3345666788888887743
No 185
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.87 E-value=1e+02 Score=17.95 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=35.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 16 l~V~nLp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 74 (103)
T 2dnm_A 16 LKVDNLTYR---TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAA 74 (103)
T ss_dssp EEEESCCTT---CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHH
Confidence 346777643 3356688889999999888763 2346777888888888863
No 186
>2khc_A Testis-specific RNP-type RNA binding protein; RRM, RNA recognition motif, bruno; NMR {Drosophila melanogaster}
Probab=25.86 E-value=91 Score=18.84 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=33.6
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+..- --...+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 44 ~V~nlp~~---~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 101 (118)
T 2khc_A 44 FIYHLPQE---FTDTDLASTFLPFGNVISAKVFIDKQTSLSKCFGFVSFDNPDSAQVAIKA 101 (118)
T ss_dssp EEECSCTT---CCHHHHHHHTTTSCEEEEEEECCCSSSSCCCCEEEEEEESSHHHHHHHHH
T ss_pred EEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEeCCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 35666432 2356688888999998888763 1235667788888888764
No 187
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=25.85 E-value=1.1e+02 Score=18.00 Aligned_cols=49 Identities=14% Similarity=0.134 Sum_probs=34.5
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC----------CccEEEecCHHHHHHHHH
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----------~~~~v~i~d~~~i~~il~ 91 (235)
.-++||+..- --...+.+++.+|| |..+.+. +.-.|-..+++.+..++.
T Consensus 17 ~l~V~nlp~~---~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (104)
T 1wi8_A 17 TAFLGNLPYD---VTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALS 75 (104)
T ss_dssp EEEEESCCSS---CCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHG
T ss_pred EEEEeCCCCc---CCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHh
Confidence 3456777543 33566788889999 8888753 124677889999998883
No 188
>2kvi_A Nuclear polyadenylated RNA-binding protein 3; RNA-binding motif, RRM, transcription termination, NUC phosphoprotein; NMR {Saccharomyces cerevisiae}
Probab=25.52 E-value=1e+02 Score=17.76 Aligned_cols=51 Identities=16% Similarity=0.387 Sum_probs=36.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- .-....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 13 l~V~nlp~~--~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 64 (96)
T 2kvi_A 13 LFIGNLPLK--NVSKEDLFRIFSPYGHIMQINIKNAFGFIQFDNPQSVRDAIEC 64 (96)
T ss_dssp EEEESSTTS--CCCHHHHHHHHTTTCCCCEEEEETTEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCcc--cCCHHHHHHHHHhcCCEEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 346777630 23356688889999998887753 4456778899999998864
No 189
>2dgt_A RNA-binding protein 30; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.42 E-value=1e+02 Score=17.57 Aligned_cols=50 Identities=16% Similarity=0.282 Sum_probs=35.9
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 13 l~V~nLp~~---~t~~~l~~~F~~~G~v~~v~~~~~~afV~f~~~~~a~~A~~~ 63 (92)
T 2dgt_A 13 LHVGNISPT---CTNQELRAKFEEYGPVIECDIVKDYAFVHMERAEDAVEAIRG 63 (92)
T ss_dssp EEEESCCSS---CCHHHHHHHHHTTSCCCEEEECSSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEECCEEEEEECCHHHHHHHHHH
Confidence 346777542 3456688999999998888764 3346677899999888853
No 190
>2e5i_A Heterogeneous nuclear ribonucleoprotein L-like; RRM domain, RBD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=25.10 E-value=1.3e+02 Score=18.83 Aligned_cols=48 Identities=10% Similarity=0.103 Sum_probs=33.5
Q ss_pred cccccCCCCCChHHHHHHHHHhhCCeEEEEeC---C-ccEEEecCHHHHHHHHHh
Q 026656 42 IGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---S-VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 42 ~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~-~~~v~i~d~~~i~~il~~ 92 (235)
+||+.. .--...+.+++.+||.|..+.+. | .-.|-..|.+.+..+...
T Consensus 30 V~NL~~---~vt~~~L~~~Fs~yG~V~~v~i~~~~Gf~aFVef~~~~~A~~A~~~ 81 (124)
T 2e5i_A 30 IQNPLY---PITVDVLYTVCNPVGKVQRIVIFKRNGIQAMVEFESVLCAQKAKAA 81 (124)
T ss_dssp EESCCS---CCCHHHHHHHHTTTSCEEEEEEEESSSEEEEEEESSHHHHHHHHHH
T ss_pred EcCcCC---CCCHHHHHHHHHhcCCEEEEEEEeCCCCEEEEEECCHHHHHHHHHH
Confidence 577753 23356789999999998777653 3 256777788877777653
No 191
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.92 E-value=1.1e+02 Score=17.89 Aligned_cols=50 Identities=22% Similarity=0.379 Sum_probs=36.5
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 18 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 76 (105)
T 1x5u_A 18 VYVGGLDEK---VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 76 (105)
T ss_dssp EEEECCCTT---CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHH
Confidence 346777542 33566889999999998887532 346778899999999874
No 192
>2do0_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RNA recognition motif, RRM, RNA binding domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.78 E-value=1.2e+02 Score=18.13 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=35.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC--------ccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS--------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~--------~~~v~i~d~~~i~~il~~ 92 (235)
-+++|+..- --...+.+++.+||+|..+.+.. .-.|...+.+.+..++..
T Consensus 18 l~V~nlp~~---~~~~~l~~~f~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 75 (114)
T 2do0_A 18 VFVANLDYK---VGWKKLKEVFSMAGVVVRADILEDKDGKSRGIGTVTFEQSIEAVQAISM 75 (114)
T ss_dssp EEEESCCTT---CCHHHHHHHHTTTSCEEEEEEEECTTCSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEEECCCCCeeeEEEEEECCHHHHHHHHHH
Confidence 446777642 34566888999999988776431 245777899999888863
No 193
>3fgx_A Rbstp2171; structural genomics, PSI-2, Pro structure initiative, midwest center for structural genomic structural genomics; 2.90A {Bacillus stearothermophilus}
Probab=24.67 E-value=57 Score=20.30 Aligned_cols=16 Identities=25% Similarity=0.513 Sum_probs=13.3
Q ss_pred HHHHHHhhCCeEEEEe
Q 026656 57 FWRLSKQYGPMVSLRL 72 (235)
Q Consensus 57 ~~~~~~~yg~v~~~~~ 72 (235)
-.++.++||.||++.+
T Consensus 10 ~~~lk~kygk~y~v~~ 25 (114)
T 3fgx_A 10 TDELKQKYGRVYEIRI 25 (114)
T ss_dssp HHHHHHHHSSEEEEEE
T ss_pred HHHHHHHhCceEEEEe
Confidence 5688899999999855
No 194
>3p5t_L Cleavage and polyadenylation specificity factor S; RRM domain, poly(A) site recognition, RNA, nuclear, RNA BIND protein; 2.70A {Homo sapiens} PDB: 3p6y_C
Probab=24.31 E-value=1.1e+02 Score=17.44 Aligned_cols=48 Identities=15% Similarity=0.293 Sum_probs=30.7
Q ss_pred ccccccCCCCCChHHHHHHHHHhhC--CeEEEEeC-----C----ccEEEecCHHHHHHHHH
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYG--PMVSLRLG-----S----VPILVVSSAKMAEEVLK 91 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg--~v~~~~~~-----~----~~~v~i~d~~~i~~il~ 91 (235)
++||+.. .-....+.+++.+|| ++..+.+. + .-.|-..+.+.+..++.
T Consensus 5 ~V~nL~~---~~t~~~l~~~F~~~G~~~v~~v~i~~~~~~g~~kG~afV~f~~~~~a~~Ai~ 63 (90)
T 3p5t_L 5 YIGNLTW---WTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMD 63 (90)
T ss_dssp EEESCCT---TCCHHHHHHHHHTTTCCCCCCEEEEECTTTCCEEEEEEECC-CHHHHHHHHH
T ss_pred EEeCCCC---CCCHHHHHHHHHHhCCCceEEEEEEecCCCCccCcEEEEEECCHHHHHHHHH
Confidence 3566643 233566888899999 77666532 1 23566678988888875
No 195
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=24.27 E-value=1.4e+02 Score=18.93 Aligned_cols=47 Identities=15% Similarity=0.296 Sum_probs=33.2
Q ss_pred cccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHH
Q 026656 42 IGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 42 ~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~ 91 (235)
+||+.. .-....+.+++.+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 5 V~nlp~---~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 5 VGNLDK---AITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp EEEEET---TCCHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred ECCCCC---cCCHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 455543 22356678889999999888763 234677789999998884
No 196
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=23.75 E-value=1.2e+02 Score=17.72 Aligned_cols=49 Identities=20% Similarity=0.344 Sum_probs=33.7
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .-....+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 12 ~V~nlp~---~~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 12 FVGNIPY---EATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEESCCT---TSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEeCCCC---cCCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4566653 23356688888999988776543 2345677899999998863
No 197
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.48 E-value=1.2e+02 Score=17.94 Aligned_cols=41 Identities=12% Similarity=0.126 Sum_probs=29.8
Q ss_pred hHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHhc
Q 026656 53 PQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 53 ~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~~ 93 (235)
....+.+.+.+||.|..+++. ++-.|...|.+.+..++.-+
T Consensus 28 l~~~L~~~F~~~G~Vi~vr~~~d~~fVtF~d~~sAlaAi~mn 69 (91)
T 2dnr_A 28 LIDELLQQFASFGEVILIRFVEDKMWVTFLEGSSALNVLSLN 69 (91)
T ss_dssp HHHHHHHHHHTTCCEEEEEECSSSEEEEESSHHHHHHGGGGT
T ss_pred HHHHHHHHHHhCCCeEEEEEecCCEEEEECChHHHHHHHhcC
Confidence 345567777889998888754 45577777998888877533
No 198
>2hgn_A Heterogeneous nuclear ribonucleoprotein F; RNA recognition motif, G-tract, G-quadruplex, alternative splicing, RNA binding protein; NMR {Homo sapiens} PDB: 2kg1_A
Probab=23.44 E-value=1.5e+02 Score=19.01 Aligned_cols=56 Identities=9% Similarity=0.113 Sum_probs=36.9
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHhcCccCCCC
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKTHDLQFCSR 100 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~~~~~~~~~ 100 (235)
++||+.. .--.+.+.+++.+|| +..+.+. +.-.|-..+++.++.++..+...+..+
T Consensus 50 fV~nLp~---~~te~dL~~~F~~~G-i~~v~i~~d~~g~srGfaFV~F~~~e~A~~Al~~~g~~l~gR 113 (139)
T 2hgn_A 50 HMRGLPY---KATENDIYNFFSPLN-PVRVHIEIGPDGRVTGEADVEFATHEEAVAAMSKDRANMQHR 113 (139)
T ss_dssp ECCSCCT---TCCHHHHHHHHCSCC-CSEEECCCSSSSCSSCCCEEECSHHHHHHHHTTCCSCSSSSC
T ss_pred EEeCCCC---CCCHHHHHHHHHhcC-CeEEEEEECCCCCCceEEEEEeCCHHHHHHHHhhCCCEECCE
Confidence 4666653 334667889999999 5576653 235778889999999885444344333
No 199
>2cq0_A Eukaryotic translation initiation factor 3 subunit 4; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.83 E-value=94 Score=18.17 Aligned_cols=50 Identities=12% Similarity=0.183 Sum_probs=35.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 18 l~V~nlp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (103)
T 2cq0_A 18 IRVTNLSED---TRETDLQELFRPFGSISRIYLAKDKTTGQSKGFAFISFHRREDAARAIAG 76 (103)
T ss_dssp EEEESCCTT---CCHHHHHTTSTTTCCEEEEEEEECSSSCSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhCCCeEEEEEeecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 356777542 33556788888999988876531 236777899999988863
No 200
>1h2v_Z 20 kDa nuclear CAP binding protein; CAP-binding-complex, RNP domain, MIF4G domain, RNA maturation, RNA export, nuclear protein, RNA-binding; 2.0A {Homo sapiens} SCOP: d.58.7.1 PDB: 1h2u_X* 1h2t_Z 1n52_B* 1n54_B 3fex_B 3fey_B 1h6k_X
Probab=22.49 E-value=1.6e+02 Score=18.88 Aligned_cols=51 Identities=18% Similarity=0.282 Sum_probs=36.4
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
.-+++|+.. .--...+.+++.+||+|..+.+. +.-.|...+++.+..++..
T Consensus 41 ~l~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~~ 100 (156)
T 1h2v_Z 41 TLYVGNLSF---YTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFCFVEYYSRADAENAMRY 100 (156)
T ss_dssp EEEEESCCT---TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC---CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345677753 23356688999999999888762 1236777899999998874
No 201
>4a8x_A RNA-binding protein with serine-rich domain 1; transcription, splicing, RNA processing, nonsense mediated D NMD, HDAC, histone deacetylation; 1.90A {Homo sapiens}
Probab=22.46 E-value=1.1e+02 Score=17.02 Aligned_cols=49 Identities=18% Similarity=0.319 Sum_probs=34.2
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC----------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+.. .-....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 8 ~V~nlp~---~~t~~~l~~~F~~~G~i~~~~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 66 (88)
T 4a8x_A 8 HIGRLTR---NVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKH 66 (88)
T ss_dssp EEECCCT---TCCHHHHHHHHHTTSCEEEEECCEETTEEEEECSEEEEEESSHHHHHHHHHH
T ss_pred EEeCCCC---CCCHHHHHHHHHhCCCEEEEEEEeCCCCCCCCCcEEEEEEecHHHHHHHHHH
Confidence 3566653 23356678888999998877652 2346777899999988863
No 202
>2dgp_A Bruno-like 4, RNA binding protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dgq_A
Probab=22.04 E-value=1.3e+02 Score=17.62 Aligned_cols=50 Identities=16% Similarity=0.238 Sum_probs=35.4
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
-++||+.. .--...+.+++.+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 16 l~V~nlp~---~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 74 (106)
T 2dgp_A 16 LFIGQIPR---NLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAFLTYCERESALKAQSA 74 (106)
T ss_dssp EEEESCCT---TCCHHHHHHHHHHHSCCCEEECCCCSSSCSCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC---CCCHHHHHHHHHhcCCeeEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 35677753 233566888999999988887532 246677799998888853
No 203
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline, PPII helix, peptide recognition, RNA binding protein; 2.20A {Homo sapiens} SCOP: d.58.7.3
Probab=21.92 E-value=1.4e+02 Score=17.84 Aligned_cols=36 Identities=11% Similarity=0.182 Sum_probs=24.8
Q ss_pred HHHHH-HhhCCeEEEEeCC--------ccEEEecCHHHHHHHHHh
Q 026656 57 FWRLS-KQYGPMVSLRLGS--------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 57 ~~~~~-~~yg~v~~~~~~~--------~~~v~i~d~~~i~~il~~ 92 (235)
+.+.+ .+||+|..+.+.. .-.|-..+++.+..+...
T Consensus 43 l~~~f~~~~G~V~~v~i~~~~~~~~~G~~fV~f~~~~~A~~A~~~ 87 (104)
T 1jmt_A 43 VFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVID 87 (104)
T ss_dssp HHHHHHHHTCCEEEEEECCSSSSSSEEEEEEEESCHHHHHHHHHH
T ss_pred HHHHhhccCCceEEEEEEeCCCCCccEEEEEEECCHHHHHHHHHH
Confidence 44455 8999999888642 234566788888877653
No 204
>1wez_A HnRNP H', FTP-3, heterogeneous nuclear ribonucleoprotein H'; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.79 E-value=1.2e+02 Score=17.84 Aligned_cols=58 Identities=10% Similarity=0.130 Sum_probs=36.0
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHhcCccCCCC
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKTHDLQFCSR 100 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~~~~~~~~~ 100 (235)
.-+++|+..- --.+.+.+++.+||.+ .+.+. +.-.|-..+++.++.++..+...+..+
T Consensus 17 ~l~V~nLp~~---~te~~l~~~F~~~G~~-~v~i~~d~~g~~~G~afV~F~~~~~a~~Al~~~~~~~~gr 82 (102)
T 1wez_A 17 CVHMRGLPYR---ATENDIYNFFSPLNPM-RVHIEIGPDGRVTGEADVEFATHEDAVAAMAKDKANMQHR 82 (102)
T ss_dssp EEEEESCCTT---CCHHHHHHSSCSCCCS-EEEEEESSSSCEEEEEEEECSSSHHHHHHHTTSSCCSSSS
T ss_pred EEEEeCCCCC---CCHHHHHHHHHHcCce-EEEEEECCCCCEeeEEEEEECCHHHHHHHHHhCCCeECCc
Confidence 3446777542 3356678888889954 55542 124677789999998886544444333
No 205
>2ytc_A PRE-mRNA-splicing factor RBM22; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.65 E-value=1.1e+02 Score=16.87 Aligned_cols=50 Identities=12% Similarity=0.214 Sum_probs=35.9
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---~~~~v~i~d~~~i~~il~~ 92 (235)
-++|++..- -....+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 15 l~V~~l~~~---~t~~~l~~~f~~~G~i~~~~~~~~kg~afV~f~~~~~A~~a~~~ 67 (85)
T 2ytc_A 15 LYVGGLGDT---ITETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEK 67 (85)
T ss_dssp EEEECCTTT---SCHHHHHHHHHTTSCEEEEEEEGGGTEEEEEESSHHHHHHHHHT
T ss_pred EEEcCCCCC---CCHHHHHHHHHhCCCEeEEEEECCCCEEEEEECCHHHHHHHHHH
Confidence 346777532 3356688889999998888754 3356777899999998863
No 206
>1x5t_A Splicing factor 3B subunit 4; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.64 E-value=1.2e+02 Score=17.25 Aligned_cols=49 Identities=14% Similarity=0.306 Sum_probs=33.8
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEE-EeC---------CccEEEecCHHHHHHHHH
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSL-RLG---------SVPILVVSSAKMAEEVLK 91 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~-~~~---------~~~~v~i~d~~~i~~il~ 91 (235)
-++||+..- -....+.+++.+||+|..+ .+. +.-.|-..+++.+..++.
T Consensus 8 l~V~nLp~~---~t~~~l~~~F~~~G~i~~~~~i~~~~~~g~~~g~afV~f~~~~~A~~A~~ 66 (96)
T 1x5t_A 8 IFIGNLDPE---IDEKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIE 66 (96)
T ss_dssp EEEECCCTT---CCHHHHHHHHHTTSCBSSCCEECCCTTTCSCCSEEEEEBSSHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCeeEEEEEEEcCCCCCcCeEEEEEECCHHHHHHHHH
Confidence 346776532 3356688889999987655 432 234677789999999886
No 207
>2i2y_A Fusion protein consists of immunoglobin G- binding protein G and splicing factor,...; protein-RNA complex RRM alpha-beta sandwich BETA1-alpha1- BETA2-BETA3-alpha2-BETA4; NMR {Streptococcus SP} PDB: 2i38_A
Probab=21.59 E-value=1.6e+02 Score=18.66 Aligned_cols=51 Identities=18% Similarity=0.321 Sum_probs=36.4
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeC----CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG----SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~----~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- --...+.+++.+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 75 ~l~V~nl~~~---~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~~ 129 (150)
T 2i2y_A 75 KVYVGNLGNN---GNKTELERAFGYYGPLRSVWVARNPPGFAFVEFEDPRDAADAVRE 129 (150)
T ss_dssp EEEEESCCSC---CSCHHHHHHHHHHSCEEEEEECSSSCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhhCCEEEEEEeeCCCcEEEEEECCHHHHHHHHHH
Confidence 3456777643 2345578888999999888764 3456777899999988863
No 208
>3pgw_A U1-A; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 1fht_A 2u1a_A 2aym_A 2b0g_A
Probab=21.55 E-value=1.6e+02 Score=21.15 Aligned_cols=54 Identities=13% Similarity=0.309 Sum_probs=35.7
Q ss_pred ccccccccCCCC-CChHHHHHHHHHhhCCeEEEEeC------CccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDY-SNPQNYFWRLSKQYGPMVSLRLG------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~-~~~~~~~~~~~~~yg~v~~~~~~------~~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..-.. .+....+.+++.+||+|..+.+. |.-.|-..+.+.+..++..
T Consensus 11 ~l~V~nlp~~~~~~~l~~~L~~~F~~~G~i~~v~~~~~~~~~g~afV~f~~~~~a~~A~~~ 71 (282)
T 3pgw_A 11 TIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 71 (282)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHhccCCeEEEEEcCCCCcceEEEEEECCHHHHHHHHHH
Confidence 345777764321 22233466888999998888743 2456778899999988843
No 209
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=21.45 E-value=45 Score=17.04 Aligned_cols=11 Identities=27% Similarity=0.697 Sum_probs=8.4
Q ss_pred CccccccccCC
Q 026656 38 GLPFIGNLHQF 48 (235)
Q Consensus 38 ~~p~~G~~~~~ 48 (235)
.+|++||++.-
T Consensus 30 ~ipilgn~fs~ 40 (57)
T 1b35_D 30 HIPVLGNIFST 40 (57)
T ss_dssp CCCCSCCSSSS
T ss_pred ccccccccccc
Confidence 47899998754
No 210
>2cqd_A RNA-binding region containing protein 1; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.30 E-value=1.4e+02 Score=17.85 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=36.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHhc
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~~ 93 (235)
-+++|+..- --...+.+++.+||+|..+.+.. .-.|-..+.+.+..++...
T Consensus 20 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~ 79 (116)
T 2cqd_A 20 IFVGGLPYH---TTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDP 79 (116)
T ss_dssp EEEECCCSS---CCHHHHHHHHHTTSCEEEEEESCCSSSCCCCSEEEEEESSHHHHHHHHTCS
T ss_pred EEEeCCCCC---CCHHHHHHHHHhCCCeeEEEEEEcCCCCccceEEEEEECCHHHHHHHHHhC
Confidence 346777532 33566888899999998887642 2467778999999988643
No 211
>2qfj_A FBP-interacting repressor; protein-DNA complex; HET: DNA; 2.10A {Homo sapiens} PDB: 3uwt_A 2kxf_A 2kxh_A
Probab=20.95 E-value=2e+02 Score=19.38 Aligned_cols=49 Identities=12% Similarity=0.271 Sum_probs=35.4
Q ss_pred ccccccCCCCCChHHHHHHHHHhhCCeEEEEeC---------CccEEEecCHHHHHHHHHh
Q 026656 41 FIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG---------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 41 ~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~---------~~~~v~i~d~~~i~~il~~ 92 (235)
++||+..- --...+.+++.+||+|..+.+. +.-.|-..+.+.+..++..
T Consensus 32 ~V~nLp~~---~t~~~l~~~f~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 89 (216)
T 2qfj_A 32 YVGSIYYE---LGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVPEAAQLALEQ 89 (216)
T ss_dssp EEECCCTT---CCHHHHHHHHGGGSCEEEEEECCC-CC-CCCSEEEEEESSHHHHHHHHHH
T ss_pred EEECCCCC---CCHHHHHHHHHhCCCEEEEEEeecCCCCccCceEEEEeCCHHHHHHHHHH
Confidence 45666532 3356688899999999888763 2346778899999998863
No 212
>2cph_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.74 E-value=1.4e+02 Score=17.48 Aligned_cols=50 Identities=14% Similarity=0.198 Sum_probs=36.0
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC----------ccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS----------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~----------~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- -....+.+++.+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 18 l~V~nlp~~---~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 77 (107)
T 2cph_A 18 ILVRNIPFQ---ANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNA 77 (107)
T ss_dssp EEEESCCTT---CCHHHHHHHHHTTSCEEEEECCCCCSSSCSSCSEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCc---CCHHHHHHHHHccCCeEEEEEecCCCCCCCcCceEEEEECCHHHHHHHHHH
Confidence 356777642 33566888999999998887632 235677899999988864
No 213
>2dha_A FLJ20171 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.65 E-value=1.6e+02 Score=18.26 Aligned_cols=51 Identities=14% Similarity=0.191 Sum_probs=33.2
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCe------EEEEe---C---CccEEEecCHHHHHHHHHhc
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPM------VSLRL---G---SVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v------~~~~~---~---~~~~v~i~d~~~i~~il~~~ 93 (235)
-++||+.. .--...+.+++.+||+| +++-. + |.-.|...+++.++.++..+
T Consensus 26 v~V~nLp~---~~te~dl~~~F~~~g~v~g~v~~v~i~~d~~gr~~G~aFV~F~~~~~A~~Al~~~ 88 (123)
T 2dha_A 26 VRMRGLPF---TATAEEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKH 88 (123)
T ss_dssp EEECSCCT---TCCHHHHHHHHHTTSCCTTGGGGEEEEECTTSCEEEEEEECCSSHHHHHHHHTTT
T ss_pred EEEeCCCC---CCCHHHHHHHHHhhCCccCCcceEEEEECCCCCEeeEEEEEECCHHHHHHHHHhC
Confidence 34666653 33466788899999974 33321 1 23467778999999998653
No 214
>1wf1_A RNA-binding protein RALY; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wf2_A
Probab=20.43 E-value=1.5e+02 Score=17.62 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=34.7
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC-CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG-SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~-~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- .--...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 30 l~V~nl~~~--~~t~~~l~~~F~~~G~v~~v~i~~g~afV~f~~~~~A~~A~~~ 81 (110)
T 1wf1_A 30 VFIGNLNTA--LVKKSDVETIFSKYGRVAGCSVHKGYAFVQYSNERHARAAVLG 81 (110)
T ss_dssp EEECSCCCS--SCCHHHHHHHHGGGSCCSEEEEETTEEEEECSSSHHHHHHHHH
T ss_pred EEEeCCCcc--cCCHHHHHHHHHhCCCeEEEEEeCCEEEEEECCHHHHHHHHHH
Confidence 356776532 03466788999999998777652 3345667788888888753
No 215
>1x5o_A RNA binding motif, single-stranded interacting protein 1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.41 E-value=1.5e+02 Score=17.72 Aligned_cols=50 Identities=22% Similarity=0.278 Sum_probs=34.6
Q ss_pred cccccccCCCCCChHHHHHHHHHhhCCeEEEEeC--------CccEEEecCHHHHHHHHHh
Q 026656 40 PFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLG--------SVPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 40 p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~--------~~~~v~i~d~~~i~~il~~ 92 (235)
-++||+..- --...+.+++.+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 28 l~V~nlp~~---~t~~~l~~~F~~~G~i~~~~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 85 (114)
T 1x5o_A 28 LYISNLPLS---MDEQELENMLKPFGQVISTRILRDSSGTSRGVGFARMESTEKCEAVIGH 85 (114)
T ss_dssp EEEESCCTT---CCHHHHHHTTTTTSCEEEEEEEECSSSCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCCC---CCHHHHHHHHHhcCCEEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 346777532 3356688888999998887653 1245677899999888863
No 216
>2cpy_A RNA-binding protein 12; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.26 E-value=1.5e+02 Score=17.76 Aligned_cols=55 Identities=9% Similarity=-0.011 Sum_probs=36.1
Q ss_pred CCCccccccccCCCCCChHHHHHHHHHhhCCe---EEEEe------CCccEEEecCHHHHHHHHHhc
Q 026656 36 PRGLPFIGNLHQFDYSNPQNYFWRLSKQYGPM---VSLRL------GSVPILVVSSAKMAEEVLKTH 93 (235)
Q Consensus 36 p~~~p~~G~~~~~~~~~~~~~~~~~~~~yg~v---~~~~~------~~~~~v~i~d~~~i~~il~~~ 93 (235)
+...-++||+..- --...+.+++.+||.| +++.. -+.-.|-..+.+.+..++..+
T Consensus 14 ~~~~l~V~nLp~~---~t~~~l~~~F~~~g~v~~~v~i~~d~~g~~~G~afV~F~~~~~a~~Al~~~ 77 (114)
T 2cpy_A 14 AKVCAHITNIPFS---ITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARKSERLH 77 (114)
T ss_dssp CCCEEEEESCCTT---SCHHHHHHHTTTSCCCSTTEEECCCTTSSCSSCEEEECSSHHHHHHHGGGC
T ss_pred CccEEEEeCcCCc---CCHHHHHHHHHhCCCcCCeEEEEECCCCCcceEEEEEECCHHHHHHHHHhC
Confidence 3334456777542 3355688888999988 44421 134577888999999998653
No 217
>2kn4_A Immunoglobulin G-binding protein G, splicing FACT arginine/serine-rich 2, S35, splicing factor SC35,; RRM domain, cell WALL; NMR {Streptococcus SP}
Probab=20.22 E-value=1.8e+02 Score=18.59 Aligned_cols=51 Identities=14% Similarity=0.216 Sum_probs=36.5
Q ss_pred ccccccccCCCCCChHHHHHHHHHhhCCeEEEEeCC---------ccEEEecCHHHHHHHHHh
Q 026656 39 LPFIGNLHQFDYSNPQNYFWRLSKQYGPMVSLRLGS---------VPILVVSSAKMAEEVLKT 92 (235)
Q Consensus 39 ~p~~G~~~~~~~~~~~~~~~~~~~~yg~v~~~~~~~---------~~~v~i~d~~~i~~il~~ 92 (235)
.-++||+..- -....+.+++.+||+|..+.+.. .-.|-..+.+.+..++..
T Consensus 72 ~l~v~nl~~~---~~~~~l~~~F~~~G~v~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 131 (158)
T 2kn4_A 72 SLKVDNLTYR---TSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDA 131 (158)
T ss_dssp EEEEESCCTT---CCHHHHHHHHHHHSCEEEEECCCCSSCTTSCCEEEEEESBHHHHHHHHHH
T ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCeEEEEEeecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3446776532 33566888889999998887642 246778899999998864
Done!