BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026658
(235 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255549562|ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223545062|gb|EEF46575.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 232
Score = 328 bits (840), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 164/200 (82%), Positives = 179/200 (89%), Gaps = 2/200 (1%)
Query: 1 MADGYWRYSDARQPQSA-LPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRYSDARQPQ +P+LV KR R+DYDV SGHEL +YYTRDDDRGALR +RDTDS
Sbjct: 1 MADAYWRYSDARQPQQQPIPTLVGKRSRSDYDVTSGHELPNYYTRDDDRGALRAIRDTDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYLRSA ISSYSGGQSAR +SG +P+R DDPRI+GIGG+DPGP+ KDR LGLG
Sbjct: 61 IGASYDRYLRSAPISSYSGGQSARPISG-VPNRVADDPRIMGIGGLDPGPTVKDRTLGLG 119
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GR E LPPDA+STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR PGGDPL+L
Sbjct: 120 SGRPETSLPPDATSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRRPGGDPLVL 179
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF+SPAHAATAMDALQG
Sbjct: 180 CFVDFLSPAHAATAMDALQG 199
>gi|427199356|gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
Length = 233
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/200 (80%), Positives = 178/200 (89%), Gaps = 1/200 (0%)
Query: 1 MADGYWRYSDARQPQ-SALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRY D+RQP +L +V KR R+DYDVPSGHEL SY++RDD+RG LRGMRDTDS
Sbjct: 1 MADAYWRYGDSRQPPPQSLTQIVGKRSRSDYDVPSGHELPSYFSRDDERGTLRGMRDTDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYLRSAQ+SSY GGQSAR +SGGM SR VDDPRIVG+G ++P + KDR LG G
Sbjct: 61 IGASYDRYLRSAQVSSYGGGQSARPISGGMSSRAVDDPRIVGMGSVEPATTVKDRTLGYG 120
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GGR EVPLPPDASSTLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESRHPGGDPL+L
Sbjct: 121 GGRPEVPLPPDASSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLVL 180
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF+SPAHAATAMDALQG
Sbjct: 181 CFVDFLSPAHAATAMDALQG 200
>gi|224118350|ref|XP_002317797.1| predicted protein [Populus trichocarpa]
gi|222858470|gb|EEE96017.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 305 bits (782), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 155/201 (77%), Positives = 175/201 (87%), Gaps = 3/201 (1%)
Query: 1 MADGYWRYS-DARQ-PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTD 58
MAD YWRY+ D+RQ P ++ SL KRPR DYD+PSG +LSSYY+RDDDRGAL +RD+D
Sbjct: 1 MADSYWRYAGDSRQQPPQSMSSLTGKRPRIDYDIPSGRDLSSYYSRDDDRGALHVIRDSD 60
Query: 59 SLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGL 118
S+GASYDRYLRS +SSY GGQSAR MSG +PS PVDD R+V +G MDPG S KDR+L +
Sbjct: 61 SIGASYDRYLRSGTVSSYGGGQSARAMSG-VPSHPVDDTRMVSMGPMDPGASVKDRSLRM 119
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G GRSEV LPPDASSTLFVEGLPSDC+RREV+HIFRPFVGYKEVRLVSKESRHPGGDPL+
Sbjct: 120 GSGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLV 179
Query: 179 LCFVDFVSPAHAATAMDALQG 199
LCFVDF+SPAHAATAMDALQG
Sbjct: 180 LCFVDFLSPAHAATAMDALQG 200
>gi|302143942|emb|CBI23047.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/199 (71%), Positives = 171/199 (85%), Gaps = 2/199 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MAD YWRY + RQP +PSL +KRPR+DYDVP GH+L SY++R+D+R A R +RD+DS+
Sbjct: 1 MADPYWRYGEVRQP-PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSI 59
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GASYDRYLR+AQ+ SY GG S R +SGG+ S PVDDPR+VG+ G+D G + K ++LG G
Sbjct: 60 GASYDRYLRNAQMPSY-GGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR E+PLPPDASSTLFVEGLP++C+RREV+HIFRPFVGYKEVRLVSKESRH GGDPL+LC
Sbjct: 119 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLC 178
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDFVSPAHAATAMDALQG
Sbjct: 179 FVDFVSPAHAATAMDALQG 197
>gi|359490723|ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
Length = 229
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 142/199 (71%), Positives = 170/199 (85%), Gaps = 3/199 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MAD YWRY + RQP +PSL +KRPR+DYDVP GH+L SY++R+D+R A R +RD+DS+
Sbjct: 1 MADPYWRYGEVRQP-PPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSI 59
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
GASYDRYLR+A + SY GG S R +SGG+ S PVDDPR+VG+ G+D G + K ++LG G
Sbjct: 60 GASYDRYLRNA-MPSY-GGDSGRPLSGGITSHPVDDPRVVGVRGVDQGATVKSQSLGFSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR E+PLPPDASSTLFVEGLP++C+RREV+HIFRPFVGYKEVRLVSKESRH GGDPL+LC
Sbjct: 118 GRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKEVRLVSKESRHSGGDPLVLC 177
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDFVSPAHAATAMDALQG
Sbjct: 178 FVDFVSPAHAATAMDALQG 196
>gi|224135091|ref|XP_002321981.1| predicted protein [Populus trichocarpa]
gi|222868977|gb|EEF06108.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/200 (74%), Positives = 166/200 (83%), Gaps = 14/200 (7%)
Query: 1 MADGYWRYS-DARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
MAD YWRY+ D+RQPQ L DVPSG +LSSYY+RDDDRGALR +RD+DS
Sbjct: 1 MADSYWRYAGDSRQPQPHL------------DVPSGRDLSSYYSRDDDRGALRVIRDSDS 48
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+GASYDRYL S ISSY GGQSAR +SG +P RPVDD R+V +G MDPG S KDR++ G
Sbjct: 49 IGASYDRYLHSGTISSYGGGQSARAISG-VPVRPVDDLRMVSMGSMDPGSSVKDRSMRTG 107
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GRSEV LPPDASSTLFVEGLPSDC+RREV+HIFRPFVGYKEVRLVSKESRHPGGDPL+L
Sbjct: 108 SGRSEVSLPPDASSTLFVEGLPSDCTRREVSHIFRPFVGYKEVRLVSKESRHPGGDPLVL 167
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF+SPAHAAT+MDALQG
Sbjct: 168 CFVDFLSPAHAATSMDALQG 187
>gi|363807818|ref|NP_001241926.1| uncharacterized protein LOC100786188 [Glycine max]
gi|255640386|gb|ACU20480.1| unknown [Glycine max]
Length = 230
Score = 268 bits (686), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 132/199 (66%), Positives = 159/199 (79%), Gaps = 2/199 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY A + + A S+ KR R+DYDV H+L SY+ DDDRG LR +RDT+SL
Sbjct: 1 MSDAYWRY--AAESRQAPSSIAGKRSRSDYDVSGVHDLPSYFPHDDDRGGLRVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLRSAQ+SSY GQS R + G +P+R +DD + IGG+D G +AKD+ GL
Sbjct: 59 DASYERYLRSAQVSSYGSGQSTRTIDGRIPNRAIDDSHVANIGGVDRGTNAKDKMPGLSS 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR++ LPPDA+STLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 119 GRADHSLPPDATSTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVLC 178
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDF+SPAHAATAM+ALQG
Sbjct: 179 FVDFMSPAHAATAMEALQG 197
>gi|363818125|ref|NP_001242627.1| uncharacterized protein LOC100800440 [Glycine max]
gi|255644702|gb|ACU22853.1| unknown [Glycine max]
Length = 230
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/199 (65%), Positives = 158/199 (79%), Gaps = 2/199 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY A + + A S+ KR R+DYDV H+L Y+ DDDRG LR +RDT+SL
Sbjct: 1 MSDAYWRY--AAESRQAPSSIAGKRSRSDYDVSGVHDLPGYFPHDDDRGGLRVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLRSAQ+SSY GQS R +SG +P+R +DD + IGG+D G +AKD+ LGL
Sbjct: 59 DASYERYLRSAQVSSYGSGQSTRTISGRIPNRAIDDSHVANIGGIDRGTNAKDKMLGLSS 118
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR++ LPPDA+STLFVEGLP +C+RREVAHIF PFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 119 GRTDHSLPPDATSTLFVEGLPPNCTRREVAHIFPPFVGYKEVRLVSKESRQPGGDPLVLC 178
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDF+SPAHAATAM+ALQG
Sbjct: 179 FVDFLSPAHAATAMEALQG 197
>gi|449456997|ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218789 [Cucumis sativus]
gi|449529543|ref|XP_004171759.1| PREDICTED: uncharacterized protein LOC101224897 [Cucumis sativus]
Length = 232
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/200 (65%), Positives = 160/200 (80%), Gaps = 2/200 (1%)
Query: 1 MADGYWRYSDARQ-PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M+D YWRY+D++Q P S++P +V KRPR DYD HEL +YY R DDR L+G++ DS
Sbjct: 1 MSDAYWRYTDSQQQPPSSVPPVVGKRPRVDYDTSGLHELPNYYPRQDDRPVLQGIKSVDS 60
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
+ SY+RYLR++QISSY GGQSAR + GG+P P++DP I+G+GG+ G + DR+ G
Sbjct: 61 INESYERYLRTSQISSY-GGQSARPVGGGVPGHPMNDPPILGLGGVVSGANVNDRSTSFG 119
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GGR +PLPPDAS+TLFVEGLPS C+RREVAHIFRPFVGYKEVRLV+KESR G DP++L
Sbjct: 120 GGRPNMPLPPDASNTLFVEGLPSSCTRREVAHIFRPFVGYKEVRLVNKESRSAGRDPVVL 179
Query: 180 CFVDFVSPAHAATAMDALQG 199
FVDFVSPAHAATAMDALQG
Sbjct: 180 GFVDFVSPAHAATAMDALQG 199
>gi|357464013|ref|XP_003602288.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491336|gb|AES72539.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 243
Score = 262 bits (669), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 130/223 (58%), Positives = 169/223 (75%), Gaps = 6/223 (2%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + KD+ L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR + LPP A++TLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLC 177
Query: 181 FVDFVSPAHAATAMDALQGQ---SNIICLSNLVVFYQIACEYI 220
FVDFVSPAHAATAMDAL G S I+ ++ +F + +++
Sbjct: 178 FVDFVSPAHAATAMDALHGNISFSFILVMTTSYIFLRQCVQFL 220
>gi|388505956|gb|AFK41044.1| unknown [Lotus japonicus]
Length = 232
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 156/200 (78%), Gaps = 4/200 (2%)
Query: 1 MADGYWRYS-DARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M+D YWRY+ ++R SA+ +KR R+DYDV H++ YY DDDRG LR +RDT+S
Sbjct: 1 MSDAYWRYAAESRHNPSAI---AAKRARSDYDVSGVHDMPGYYPHDDDRGGLRVIRDTES 57
Query: 60 LGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG 119
L ASY+RYLRSAQ+SS+ GQS R + G +PS DD + IGG+D GPSAK++ LGL
Sbjct: 58 LDASYERYLRSAQVSSFGEGQSTRTIRGRLPSHSFDDSHVTSIGGVDRGPSAKEKILGLS 117
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GR + LPPDA+STLFVEGLP++C RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+L
Sbjct: 118 SGRPDHSLPPDATSTLFVEGLPTNCPRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLVL 177
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF SPAHAATA DALQG
Sbjct: 178 CFVDFESPAHAATAKDALQG 197
>gi|388504624|gb|AFK40378.1| unknown [Medicago truncatula]
Length = 228
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/199 (63%), Positives = 157/199 (78%), Gaps = 3/199 (1%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + K + L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKGQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR + LPP A++TLFVEGLPS+C+RREVAHIFRPFVGYKEVRLVSKESR PGGDPL+LC
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVAHIFRPFVGYKEVRLVSKESRQPGGDPLLLC 177
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDFVSPAHAATAMDAL G
Sbjct: 178 FVDFVSPAHAATAMDALHG 196
>gi|357464011|ref|XP_003602287.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355491335|gb|AES72538.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 258
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 157/204 (76%), Gaps = 8/204 (3%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++++Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAESQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +GG+D + KD+ L L G
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGGVDRRTNVKDQILELSG 117
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHI-----FRPFVGYKEVRLVSKESRHPGGD 175
GR + LPP A++TLFVEGLPS+C+RREVA I FRPFVGYKEVRLVSKESR PGGD
Sbjct: 118 GRPDHSLPPGATNTLFVEGLPSNCTRREVARILSSDIFRPFVGYKEVRLVSKESRQPGGD 177
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
PL+LCFVDFVSPAHAATAMDAL G
Sbjct: 178 PLLLCFVDFVSPAHAATAMDALHG 201
>gi|374256077|gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
guineensis]
Length = 294
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 124/215 (57%), Positives = 157/215 (73%), Gaps = 18/215 (8%)
Query: 1 MADGYWRYSDARQPQSALPSLVS--KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDT 57
MAD YWRYSD R +A+ + + KRPR DY D+P G E+ YY+RD++R R +RDT
Sbjct: 35 MADAYWRYSDPRHQAAAMAAPTAPLKRPRADYADIPGGPEVLGYYSRDEERTGHRTIRDT 94
Query: 58 DSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMD----------P 107
+S+ ASYDRYLR+ S+ G+S R ++GGM PVDD R++G+GGMD P
Sbjct: 95 ESIAASYDRYLRNG--VSFGAGESVRTVAGGMTGHPVDDRRMMGVGGMDGRTVGYGGGRP 152
Query: 108 GP---SAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P R++G GGGR E PLP DAS+TLFVEGLP++C+RREV+HIFRPFVG++EVRL
Sbjct: 153 EPPLGGMDGRSVGYGGGRPEPPLPQDASNTLFVEGLPANCTRREVSHIFRPFVGFREVRL 212
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
V+KESRHPGGDPL+LCFVDF +PA AA A+DALQG
Sbjct: 213 VNKESRHPGGDPLVLCFVDFSTPAQAAVALDALQG 247
>gi|449462154|ref|XP_004148806.1| PREDICTED: uncharacterized protein LOC101222348 isoform 1 [Cucumis
sativus]
gi|449462156|ref|XP_004148807.1| PREDICTED: uncharacterized protein LOC101222348 isoform 2 [Cucumis
sativus]
Length = 257
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 148/232 (63%), Gaps = 41/232 (17%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD YW + +QP P+++ KRPRTDY++P +GH++ +Y T DDRG R ++
Sbjct: 1 MADDYW---NRQQPLLPSPAML-KRPRTDYELPASGLSTGHDMHNYLT-SDDRGGPRSVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKD-- 113
DT ++G++YDRYL+S Q+SS++ G+ H GM RPV + + +G PGP D
Sbjct: 56 DTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGM-GRPVAN--RMPVGNRMPGPLLPDPI 112
Query: 114 ----------------RALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRR 147
R L G GR VPLPPDAS+TL+VEGLP D SRR
Sbjct: 113 VMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRR 172
Query: 148 EVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
EVAHIFRPFVGYKE+RLVSKES+H GGDPLILCFVDF +PA AATAM ALQG
Sbjct: 173 EVAHIFRPFVGYKELRLVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
>gi|222634881|gb|EEE65013.1| hypothetical protein OsJ_19964 [Oryza sativa Japonica Group]
Length = 265
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 134/185 (72%), Gaps = 15/185 (8%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP E++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G
Sbjct: 51 KRPRPADFSDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAG 110
Query: 80 -----QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASST 134
+S R +GG PV+D ++ GGM+ R +G GGG E PLPPDAS+T
Sbjct: 111 AGPGAESIRPAAGGNAGYPVEDRPMMAGGGME------ARNIGFGGGMPEPPLPPDASNT 164
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+EG+P+DC+RREV+HIFRPFVG++EVRLVSKE+RHPGGDP++LCFVDF + + AA AM
Sbjct: 165 LFIEGIPTDCARREVSHIFRPFVGFREVRLVSKEARHPGGDPILLCFVDFETASQAAIAM 224
Query: 195 DALQG 199
DALQG
Sbjct: 225 DALQG 229
>gi|223973687|gb|ACN31031.1| unknown [Zea mays]
Length = 221
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 129/181 (71%), Gaps = 11/181 (6%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS 81
KRPR T++ DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG +
Sbjct: 12 KRPRPTEFSDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHA 71
Query: 82 A---RHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
R GG + PVDD ++ GMD R +G GG E PLPPDAS+TL++E
Sbjct: 72 GEPIRPAVGGNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIE 125
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
G+PSDC+RREV+HIFRPFVG++EVRLV+KE +HPGGDP++LCFVDF P +A A+DALQ
Sbjct: 126 GVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIALDALQ 185
Query: 199 G 199
G
Sbjct: 186 G 186
>gi|413953430|gb|AFW86079.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 262
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 129/181 (71%), Gaps = 11/181 (6%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQS 81
KRPR T++ DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG +
Sbjct: 53 KRPRPTEFSDVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHA 112
Query: 82 A---RHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
R GG + PVDD ++ GMD R +G GG E PLPPDAS+TL++E
Sbjct: 113 GEPIRPAVGGNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIE 166
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
G+PSDC+RREV+HIFRPFVG++EVRLV+KE +HPGGDP++LCFVDF P +A A+DALQ
Sbjct: 167 GVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIALDALQ 226
Query: 199 G 199
G
Sbjct: 227 G 227
>gi|449506960|ref|XP_004162895.1| PREDICTED: uncharacterized LOC101222348 isoform 1 [Cucumis sativus]
gi|449506964|ref|XP_004162896.1| PREDICTED: uncharacterized LOC101222348 isoform 2 [Cucumis sativus]
Length = 257
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 146/232 (62%), Gaps = 41/232 (17%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD YW + +QP P+++ KRPRTDY++P +GH++ +Y T DDRG R ++
Sbjct: 1 MADDYW---NRQQPLLPSPAML-KRPRTDYELPASGLSTGHDMHNYLT-SDDRGGPRSVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKD-- 113
DT ++G++YDRYL+S Q+SS++ G+ H GM RPV + + + PGP D
Sbjct: 56 DTQTIGSAYDRYLQSVQLSSFTSGEVPTHGEMGM-GRPVAN--RMPVRNRMPGPLLPDPI 112
Query: 114 ----------------RALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRR 147
R L G GR VPLPPDAS+TL+VEGLP D SRR
Sbjct: 113 VMSRPPAVSPDLAPNGRNLEYGNHLPVDSMSRPGRETVPLPPDASNTLYVEGLPPDSSRR 172
Query: 148 EVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
EVAHIFRPFVGYKE+R VSKES+H GGDPLILCFVDF +PA AATAM ALQG
Sbjct: 173 EVAHIFRPFVGYKELRFVSKESKHRGGDPLILCFVDFANPACAATAMSALQG 224
>gi|242091796|ref|XP_002436388.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
gi|241914611|gb|EER87755.1| hypothetical protein SORBIDRAFT_10g001660 [Sorghum bicolor]
Length = 266
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 128/181 (70%), Gaps = 11/181 (6%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP +++ YY RD++R R RDT++L ASY+R+LR+ QI S+ GG
Sbjct: 56 KRPRPADFSDVPGAPDMTGYYPRDEERAGYRPARDTEALNASYERFLRTGQIQSFGGGPA 115
Query: 80 -QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVE 138
+ R GG PVDD ++ GMD R +G GGG E PLPPDAS+TL++E
Sbjct: 116 GEPIRPAVGGNAGYPVDDRSMMAARGMD------SRNIGFGGGMPEPPLPPDASNTLYIE 169
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
G+P+ C+RREV+HIFRPFVG++EVRLV+KE +HPGGDP++LCFVDF P +A AM+ALQ
Sbjct: 170 GIPTGCTRREVSHIFRPFVGFREVRLVNKEPKHPGGDPIVLCFVDFAEPTQSAIAMEALQ 229
Query: 199 G 199
G
Sbjct: 230 G 230
>gi|115477659|ref|NP_001062425.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|42408101|dbj|BAD09242.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|42408712|dbj|BAD09930.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113624394|dbj|BAF24339.1| Os08g0547000 [Oryza sativa Japonica Group]
gi|215767903|dbj|BAH00132.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 294
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 144/218 (66%), Gaps = 20/218 (9%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 62 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 120
Query: 83 RHM------SGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 121 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 172
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++A
Sbjct: 173 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATLALEA 232
Query: 197 LQGQSNIICLSNLVVFYQIACEYISD----KICVHIKF 230
LQG+ IC L F + + +ICVH F
Sbjct: 233 LQGEHTYICRYGLCCFTDNMTLHFENMHLSRICVHSSF 270
>gi|356576041|ref|XP_003556143.1| PREDICTED: uncharacterized protein LOC100812551 isoform 1 [Glycine
max]
Length = 252
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 146/223 (65%), Gaps = 28/223 (12%)
Query: 1 MADGYWRYSDARQPQSALPS-LVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRG 53
M DG W RQ Q LPS + KRPRT+YD+ PSG +E+ +Y R+DD R
Sbjct: 1 MTDGSWN----RQQQPFLPSSAMLKRPRTEYDISPSGLTSGGNEMHNYIGRNDDHTGHRI 56
Query: 54 MRDTDSLGASYDRYLRSAQISSYSGGQSARHMS-------GGMPSRPVDDPRIVGIGGMD 106
++DT +LG+++DRYL+SA ++S++ G+++ S GG+P + DP ++G G
Sbjct: 57 LKDTKTLGSAFDRYLQSAGLTSFNSGEASAIGSVGLERGVGGLPRHSLTDPAVMGHPGGG 116
Query: 107 PGPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
+ R + G G VPLPPDASSTL+VEGLPSD +RREVAHIFRPF
Sbjct: 117 HDLARGGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPF 176
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VGY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 177 VGYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 219
>gi|255637493|gb|ACU19073.1| unknown [Glycine max]
Length = 251
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 143/222 (64%), Gaps = 27/222 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG+W P S + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGFWNRQQPLHPSSTM----LKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRML 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT ++G++YDRYL+SA+++S++ G+++ G+ P + DP ++G G
Sbjct: 57 KDTKTIGSAYDRYLQSARLTSFNSGEASAVGGVGLGRGAGGLPHHSLTDPAVMGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFV
Sbjct: 117 DHARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
GY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 177 GYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 218
>gi|388513795|gb|AFK44959.1| unknown [Lotus japonicus]
Length = 239
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/199 (52%), Positives = 136/199 (68%), Gaps = 23/199 (11%)
Query: 24 KRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSG 78
KRPR+DYD+P SG+++++Y RDDDR R +RDT ++G++YDRYL+S Q+S+Y+
Sbjct: 8 KRPRSDYDMPASGLSSGNDINNYIVRDDDRTGPRMLRDTKTIGSTYDRYLQSGQLSAYTS 67
Query: 79 GQSAR-------HMSGGMPSRPVDDPRIVGI-GGMDPGPSAKDRALGLGG---------- 120
G+++ GG+P + D +G GG P + R GG
Sbjct: 68 GEASTIGGLGYARGPGGLPGHSLADHAAMGRHGGGGPDIAPNGRGFNYGGQPPVDSVSRP 127
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
G VPLPPDASSTL+VEGLPSD ++REVAHIFRPFVGY+EVRLV+KES+H GGDPLILC
Sbjct: 128 GHETVPLPPDASSTLYVEGLPSDSTKREVAHIFRPFVGYREVRLVTKESKHRGGDPLILC 187
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDF +PA AATA+ ALQG
Sbjct: 188 FVDFENPACAATALSALQG 206
>gi|356535806|ref|XP_003536434.1| PREDICTED: uncharacterized protein LOC100815695 [Glycine max]
Length = 251
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 142/222 (63%), Gaps = 27/222 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG+W P S + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGFWNRQQPLHPSSTM----LKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRML 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT ++G++YDRYL+SA ++S++ G+++ G+ P + DP ++G G
Sbjct: 57 KDTKTIGSAYDRYLQSAGLTSFNSGEASAVGGVGLGRGAGGLPHHSLTDPAVMGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFV
Sbjct: 117 DHARNGRNVNYGGQLPLDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
GY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 177 GYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 218
>gi|356576043|ref|XP_003556144.1| PREDICTED: uncharacterized protein LOC100812551 isoform 2 [Glycine
max]
Length = 244
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 143/218 (65%), Gaps = 26/218 (11%)
Query: 1 MADGYWRYSDARQPQSALPS-LVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDS 59
M DG W RQ Q LPS + KRPRT+Y G+E+ +Y R+DD R ++DT +
Sbjct: 1 MTDGSWN----RQQQPFLPSSAMLKRPRTEY---GGNEMHNYIGRNDDHTGHRILKDTKT 53
Query: 60 LGASYDRYLRSA-QISSYSGGQSARHMS-------GGMPSRPVDDPRIVGIGGMDPGPSA 111
LG+++DRYL+SA Q++S++ G+++ S GG+P + DP ++G G +
Sbjct: 54 LGSAFDRYLQSAGQLTSFNSGEASAIGSVGLERGVGGLPRHSLTDPAVMGHPGGGHDLAR 113
Query: 112 KDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
R + G G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+E
Sbjct: 114 GGRNVNYGDQLPVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYRE 173
Query: 162 VRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 174 VRLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 211
>gi|356576045|ref|XP_003556145.1| PREDICTED: uncharacterized protein LOC100813445 isoform 1 [Glycine
max]
Length = 252
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 110/221 (49%), Positives = 144/221 (65%), Gaps = 24/221 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG----HELSSYYTRDDDRGALRGMR 55
M DG+W + Q + L KRPRT+YD+ PSG +E+ +Y R+DD R ++
Sbjct: 1 MTDGFWNRQQQQPLQPSSAML--KRPRTEYDMSPSGLTGGNEMHNYIARNDDHTGHRMLK 58
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIVGIGGMDPG 108
DT +LG++YDRYL+SA ++S++ G+++ GG+P + DP ++G G
Sbjct: 59 DTKTLGSAYDRYLQSAGLTSFNSGEASAIGGVGLGRGVGGLPRHSLTDPAVMGHPGGGHD 118
Query: 109 PSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
+ R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVG
Sbjct: 119 LARNGRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVG 178
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
Y+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 179 YREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 219
>gi|326490583|dbj|BAJ89959.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 333
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 109/221 (49%), Positives = 144/221 (65%), Gaps = 24/221 (10%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G E++ YY R++ +RD +++GASYDRYLR+ + S +
Sbjct: 71 PSL--KRARPDYGDGPGGQEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNG-MPSVA 125
Query: 78 GGQSARHMSGGMPSR----------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPL 127
+ +R + G M PVDD R++G+ GMD RA+G G R E PL
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGMD------SRAMGYGA-RPEPPL 178
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF SP
Sbjct: 179 PPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSP 238
Query: 188 AHAATAMDALQGQSNIICLSNLVVFYQIACEYISDKICVHI 228
A A A++ALQG++ +C L +ISD I HI
Sbjct: 239 AQATIALEALQGENTCVCRFGLCSCID-NLTFISDNIHFHI 278
>gi|255645608|gb|ACU23298.1| unknown [Glycine max]
Length = 242
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 138/217 (63%), Gaps = 26/217 (11%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DGYW QS + KRPR+DY G+E+ + + RDDDR R ++DT ++
Sbjct: 1 MTDGYWNRQQTLLSQSGM----LKRPRSDY----GNEMHNNFARDDDRTGHRMLKDTKTI 52
Query: 61 GASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIVGI-GGMDPGPSAK 112
G++YDRYL+S Q+SS++ G+++ GG+ + DP ++G GG P +
Sbjct: 53 GSAYDRYLQSGQLSSFTSGEASTVGGLGLARGGGGLSDHSLADPSVMGRHGGGGPDLAPN 112
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + GG G V LPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+EV
Sbjct: 113 GRGVNYGGQLPVDAVSRPGPETVSLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREV 172
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
RLVSKES+H GGDP LCFVDF +PA AATAM ALQG
Sbjct: 173 RLVSKESKHRGGDPHYLCFVDFANPACAATAMSALQG 209
>gi|356535808|ref|XP_003536435.1| PREDICTED: uncharacterized protein LOC100816230 isoform 1 [Glycine
max]
Length = 251
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 140/222 (63%), Gaps = 27/222 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-PSG-----HELSSYYTRDDDRGALRGM 54
M DG W RQ PS + KRPRT+YD+ PSG +E+ +Y R+DD R +
Sbjct: 1 MTDGSWN----RQQSFLPPSAMLKRPRTEYDMSPSGLTSGGNEMHNYIARNDDHTGHRIL 56
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDP 107
+DT +LG++YDRYL+SA ++S++ G+++ S G+ P + DP + G G
Sbjct: 57 KDTKTLGSAYDRYLQSAGLTSFNSGEASAISSVGLGRGVGGLPHHSLTDPAVTGHPGGGH 116
Query: 108 GPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
S R + G +PLPPDASSTL+VEGLPS +RREVAHIFRPFV
Sbjct: 117 DLSRNGRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFV 176
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
GY+EVRLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 177 GYREVRLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 218
>gi|356576047|ref|XP_003556146.1| PREDICTED: uncharacterized protein LOC100813445 isoform 2 [Glycine
max]
Length = 245
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 141/217 (64%), Gaps = 23/217 (10%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DG+W + Q + L KRPRT+Y G+E+ +Y R+DD R ++DT +L
Sbjct: 1 MTDGFWNRQQQQPLQPSSAML--KRPRTEY---GGNEMHNYIARNDDHTGHRMLKDTKTL 55
Query: 61 GASYDRYLRSA-QISSYSGGQSA-------RHMSGGMPSRPVDDPRIVGIGGMDPGPSAK 112
G++YDRYL+SA Q++S++ G+++ GG+P + DP ++G G +
Sbjct: 56 GSAYDRYLQSAGQLTSFNSGEASAIGGVGLGRGVGGLPRHSLTDPAVMGHPGGGHDLARN 115
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + GG G VPLPPDASSTL+VEGLPSD +RREVAHIFRPFVGY+EV
Sbjct: 116 GRNVNYGGQLTVDAASMPGPETVPLPPDASSTLYVEGLPSDSTRREVAHIFRPFVGYREV 175
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
RLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 176 RLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 212
>gi|224066731|ref|XP_002302187.1| predicted protein [Populus trichocarpa]
gi|222843913|gb|EEE81460.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 144/222 (64%), Gaps = 28/222 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRD--DDRGALRGMRDTD 58
M DGYW + +QP + S + KRPR+DYD+PS +E+ +YY RD DDR ++D+
Sbjct: 1 MTDGYW---NRQQPSNVPSSGMLKRPRSDYDMPSSYEMQNYYPRDVDDDRTRYETVKDSK 57
Query: 59 SLGASYDRYLRSAQISSYSGGQSA--------RHMSGGMPSRPVDDPRIVG---IGGMDP 107
S+G++YDRYL++AQ +++ +++ R + GGM P+ D ++ G+D
Sbjct: 58 SIGSAYDRYLQNAQAPTFASREASALGGAGFGRGIGGGMSGLPIADSAVMTRPRSAGLDL 117
Query: 108 GPSAKDRALGLGGGRSE----------VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
+ +D +G R E LPPDAS+TL+VEG P DCSRREVAHIFRPFV
Sbjct: 118 ASNGRD--VGFVRQRPEDRIARSDREMAHLPPDASNTLYVEGFPPDCSRREVAHIFRPFV 175
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
GYKEVRLVSKE+R GGDP+ILCFVDFV+P AATAM ALQG
Sbjct: 176 GYKEVRLVSKEARQRGGDPIILCFVDFVNPECAATAMSALQG 217
>gi|356535810|ref|XP_003536436.1| PREDICTED: uncharacterized protein LOC100816230 isoform 2 [Glycine
max]
Length = 243
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 137/217 (63%), Gaps = 25/217 (11%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M DG W RQ PS + KRPRT+Y G+E+ +Y R+DD R ++DT +L
Sbjct: 1 MTDGSWN----RQQSFLPPSAMLKRPRTEY---GGNEMHNYIARNDDHTGHRILKDTKTL 53
Query: 61 GASYDRYLRSA-QISSYSGGQSARHMSGGM-------PSRPVDDPRIVGIGGMDPGPSAK 112
G++YDRYL+SA Q++S++ G+++ S G+ P + DP + G G S
Sbjct: 54 GSAYDRYLQSAGQLTSFNSGEASAISSVGLGRGVGGLPHHSLTDPAVTGHPGGGHDLSRN 113
Query: 113 DRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
R + G +PLPPDASSTL+VEGLPS +RREVAHIFRPFVGY+EV
Sbjct: 114 GRNVNYASQLPVDAASMPGPETLPLPPDASSTLYVEGLPSGSTRREVAHIFRPFVGYREV 173
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
RLVSKES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 174 RLVSKESKHRGGDPLILCFVDFANPACAATALSALQG 210
>gi|115466130|ref|NP_001056664.1| Os06g0127500 [Oryza sativa Japonica Group]
gi|25553563|dbj|BAC24834.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|55295879|dbj|BAD67747.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113594704|dbj|BAF18578.1| Os06g0127500 [Oryza sativa Japonica Group]
Length = 293
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 133/213 (62%), Gaps = 43/213 (20%)
Query: 24 KRPR-TDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-- 79
KRPR D+ DVP E++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G
Sbjct: 51 KRPRPADFSDVPGAPEMAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAG 110
Query: 80 -----QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASST 134
+S R +GG PV+D ++ GGM+ R +G GGG E PLPPDAS+T
Sbjct: 111 AGPGAESIRPAAGGNAGYPVEDRPMMAGGGME------ARNIGFGGGMPEPPLPPDASNT 164
Query: 135 LFVEGLPSDCSRREVAH----------------------------IFRPFVGYKEVRLVS 166
LF+EG+P+DC+RREV+ IFRPFVG++EVRLVS
Sbjct: 165 LFIEGIPTDCARREVSRILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVS 224
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
KE+RHPGGDP++LCFVDF + + AA AMDALQG
Sbjct: 225 KEARHPGGDPILLCFVDFETASQAAIAMDALQG 257
>gi|218201560|gb|EEC83987.1| hypothetical protein OsI_30140 [Oryza sativa Indica Group]
Length = 218
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 16/183 (8%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 12 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 70
Query: 83 RHM------SGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 71 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 122
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++A
Sbjct: 123 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATLALEA 182
Query: 197 LQG 199
LQG
Sbjct: 183 LQG 185
>gi|357443729|ref|XP_003592142.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481190|gb|AES62393.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 252
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 142/225 (63%), Gaps = 33/225 (14%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADG+W P P + KRPRT+YD V SG+E+ +Y +++ L
Sbjct: 1 MADGFWNRQQQHLPP---PGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLN--- 54
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQS--------ARHMSGGMPSRPVDDPRIVG-IGGMD 106
DT LG++YDR+L+SA ++S++ G++ AR + G +P + DP +G + G+
Sbjct: 55 DTKILGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-GELPGHSLGDPSAMGHLSGVG 113
Query: 107 PGP--SAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFR 154
GP S R + GG G +PLP DASSTL+VEGLPSD ++REVAHIFR
Sbjct: 114 GGPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
PFVGY+EVRLV+KES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 174 PFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQG 218
>gi|222640974|gb|EEE69106.1| hypothetical protein OsJ_28175 [Oryza sativa Japonica Group]
Length = 268
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 131/183 (71%), Gaps = 16/183 (8%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R DY DVP+G +++ YY R+ DR +R+ +++GASYDRYLR+ + S + ++
Sbjct: 62 KRARPDYGDVPAGQDMTGYYPRETDRTGYHALRENEAIGASYDRYLRNG-MPSVAATETN 120
Query: 83 RHM------SGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLF 136
R + GGM PVDD R++G+G MD R +G G R E PLP DASSTL+
Sbjct: 121 RPVVGGMGGMGGMGGYPVDDRRMIGVG-MD------SRGMGYGA-RPEPPLPADASSTLY 172
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
VEGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++A
Sbjct: 173 VEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATLALEA 232
Query: 197 LQG 199
LQG
Sbjct: 233 LQG 235
>gi|326499832|dbj|BAJ90751.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501246|dbj|BAJ98854.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 132/192 (68%), Gaps = 23/192 (11%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G E++ YY R++ +RD +++GASYDRYLR+ + S +
Sbjct: 71 PSL--KRARPDYGDGPGGQEMAGYYPREN--AGYHSLRDNEAIGASYDRYLRNG-MPSVA 125
Query: 78 GGQSARHMSGGMPSR----------PVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPL 127
+ +R + G M PVDD R++G+ GMD RA+G G R E PL
Sbjct: 126 ANEPSRAVVGAMGGAAMVGGGMSGYPVDDRRMMGVVGMD------SRAMGYGA-RPEPPL 178
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF SP
Sbjct: 179 PPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDSP 238
Query: 188 AHAATAMDALQG 199
A A A++ALQG
Sbjct: 239 AQATIALEALQG 250
>gi|388500704|gb|AFK38418.1| unknown [Medicago truncatula]
Length = 252
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 141/225 (62%), Gaps = 33/225 (14%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADG+W P P + KRPRT+YD V SG+E+ +Y +++ L
Sbjct: 1 MADGFWNRQQQHLPP---PGGMLKRPRTEYDTAPSGVTSGNEVHNYIAQNNGHQMLN--- 54
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQS--------ARHMSGGMPSRPVDDPRIVG-IGGMD 106
DT LG++YDR+L+SA ++S++ G++ AR + G +P + DP +G + G+
Sbjct: 55 DTKILGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGV-GELPGHSLGDPSAMGHLSGVG 113
Query: 107 PGP--SAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFR 154
GP S R GG G +PLP DASSTL+VEGLPSD ++REVAHIFR
Sbjct: 114 GGPDLSRNGRDANFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAHIFR 173
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
PFVGY+EVRLV+KES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 174 PFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQG 218
>gi|326533746|dbj|BAK05404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 263
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 138/230 (60%), Gaps = 39/230 (16%)
Query: 1 MADGYWRYSD----------ARQPQSALPSLVS------------KRPRT---DYDVPSG 35
MAD YWRY+D R P + P ++ KRPR D P
Sbjct: 1 MADAYWRYADLQRQQQQQQQMRTPSAGAPQSLTAAAAAAAGQQPLKRPRPGDHSADGPGA 60
Query: 36 HELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG------QSARHMSGGM 89
E++ YY RD++R +RDT +L ASY+R+LR+ QI S+ G + A +S G
Sbjct: 61 PEMAGYYPRDEERPGYAAVRDTQALNASYERFLRTGQIQSHGAGPAGGSVRPAAGVSAG- 119
Query: 90 PSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREV 149
DD + GGM+ R +G GGG E PLPPDAS+TLF+EG+P+DC RREV
Sbjct: 120 -GYQADDRPGMAAGGMN------GRNVGFGGGMPEPPLPPDASNTLFIEGIPTDCERREV 172
Query: 150 AHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+HIFRPFVG++EVRLV+KE RHPGGDP++LCFVDF + A AA AM+ALQG
Sbjct: 173 SHIFRPFVGFQEVRLVNKEPRHPGGDPIVLCFVDFANAAQAAIAMEALQG 222
>gi|358345383|ref|XP_003636759.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|23304837|emb|CAD48198.1| RNA-binding protein [Medicago truncatula]
gi|355502694|gb|AES83897.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 261
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 141/223 (63%), Gaps = 31/223 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD-----VPSGHELSSYYTRDDDRGALRGMR 55
MADGYW + P S L KRPR DY+ +PSG+E+ Y +R++DR ++
Sbjct: 1 MADGYWNRQQSLLPHSGL----HKRPRPDYEMPASGLPSGNEMH-YLSREEDRSGHPMVK 55
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDDPRIV----GIGG 104
D+ ++G++YDRYL+ Q+ S++ G+++ + GG+P+ + DP + G GG
Sbjct: 56 DSKTIGSAYDRYLQ-GQVPSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHGGGG 114
Query: 105 MDPGPSAKDRALGLG--------GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
D P+ + G G LPPDAS TL++EGLPSDC+RREVAHIFRPF
Sbjct: 115 PDLAPNGRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIFRPF 174
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VGY+EVRLVSKE++H GDPLILCFVDF +PA AATA+ ALQG
Sbjct: 175 VGYREVRLVSKEAKH-RGDPLILCFVDFANPACAATALSALQG 216
>gi|293331463|ref|NP_001168957.1| uncharacterized protein LOC100382777 [Zea mays]
gi|223974013|gb|ACN31194.1| unknown [Zea mays]
Length = 287
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 126/195 (64%), Gaps = 27/195 (13%)
Query: 24 KRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA 82
KR R D+ DV G +++ YY R+ DR +R+ D+LGASYDRYLR+ ++S ++
Sbjct: 68 KRARPDFGDVSGGQDMTGYYPRETDRSGYHSLRENDTLGASYDRYLRNG-MASVGANDTS 126
Query: 83 RHMSGGMPSRP------------------VDDPRIVGIGGMDPGPSAKDRALGLGGGRSE 124
R G VD R++G+ GMD R +G GG R E
Sbjct: 127 RAAGMGAGLAAGMTAGMGAGMAAGMAGYGVDGQRMMGVVGMD------SRGMGYGG-RPE 179
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
PLPPDASSTL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF
Sbjct: 180 PPLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDF 239
Query: 185 VSPAHAATAMDALQG 199
+PA A A++ALQG
Sbjct: 240 DNPAQATIALEALQG 254
>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334950|gb|EFH65368.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 240
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/219 (48%), Positives = 140/219 (63%), Gaps = 30/219 (13%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MADGYW + ++ Q LPS KRPR+D++ P +GH YY RD+D +
Sbjct: 1 MADGYW---NQQRQQHHLPSGPPKRPRSDFEAPPSTMATGHG-GGYYPRDEDLD----VP 52
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA------RHMSGGMPSRPVDD--PRIVGIGGMDP 107
DT ++G++YDRYL+S Q SS G+ GG + VDD R G+ +D
Sbjct: 53 DTRTIGSAYDRYLQSVQTSSLQSGEGGSVSMGRPGGGGGGNGQTVDDFMMRRGGVLPLDY 112
Query: 108 GPSAKDRALGLGG-------GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+ + A+G R +PLPPDAS+TL+VEGLPS+CSRREVAHIFRPFVGY+
Sbjct: 113 GPNGQ--AIGFDPPESVGRRNRETLPLPPDASNTLYVEGLPSNCSRREVAHIFRPFVGYR 170
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
EVRLV+K+S+H GDP++LCFVDF +PA AATA+ ALQG
Sbjct: 171 EVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQG 209
>gi|125553883|gb|EAY99488.1| hypothetical protein OsI_21456 [Oryza sativa Indica Group]
Length = 227
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 123/197 (62%), Gaps = 41/197 (20%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGG-------QSARHMSGGMP 90
++ YY+RD++R R RDT++L ASY+R+LR+ QI SY G +S R +GG
Sbjct: 1 MAGYYSRDEERPGYRPARDTEALNASYERFLRTGQIQSYGAGAGAGPGAESIRPAAGGNA 60
Query: 91 SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVA 150
PV+D ++ GGM+ R +G GGG E PLPPDAS+TLF+EG+P+DC+RREV+
Sbjct: 61 GYPVEDRPMMAGGGMEA------RNIGFGGGMPEPPLPPDASNTLFIEGIPTDCARREVS 114
Query: 151 H----------------------------IFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
IFRPFVG++EVRLVSKE+RHPGGDP++LCFV
Sbjct: 115 RILKSHAFFCLSLIFHLHKFCWSFTFPQDIFRPFVGFREVRLVSKEARHPGGDPILLCFV 174
Query: 183 DFVSPAHAATAMDALQG 199
DF + + AA AMDALQG
Sbjct: 175 DFETASQAAIAMDALQG 191
>gi|357110599|ref|XP_003557104.1| PREDICTED: uncharacterized protein LOC100821534 [Brachypodium
distachyon]
Length = 261
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 138/231 (59%), Gaps = 40/231 (17%)
Query: 1 MADGYWRYS-DARQPQSALPSLVS--------------------KRPR-TDY-DVPSGHE 37
MAD YWRY+ D RQ Q + KRPR +Y DVP E
Sbjct: 1 MADAYWRYNADPRQLQQQQQQQMLPPSARAPNAAAPAAAGQQPLKRPRPAEYSDVPGSSE 60
Query: 38 LSSYYTRDDDRGALRGM------RDTDSLGASYDRYLRSAQISSYSGGQ---SARHMSGG 88
++ YY RD++R RDT +L ASY+RYLR+ QI S+ G S R +G
Sbjct: 61 MAGYYPRDEERAGYAAAAAAAAARDTQALNASYERYLRTGQIQSHGAGPAGGSIRPAAGA 120
Query: 89 MPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+DD V IGG++ R +G G G E PLPPDAS+TLF+EG+P+DC RRE
Sbjct: 121 NAGYQLDD--RVAIGGVE------GRNVGFGTGMPEPPLPPDASNTLFIEGIPNDCERRE 172
Query: 149 VAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
V+HIFRPFVG+KEVRLV+KE RHPGGDP++LCFVDF + A AA AM+ALQG
Sbjct: 173 VSHIFRPFVGFKEVRLVTKEPRHPGGDPIVLCFVDFTNAAQAAVAMEALQG 223
>gi|357148760|ref|XP_003574884.1| PREDICTED: uncharacterized protein LOC100836479 [Brachypodium
distachyon]
Length = 296
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 130/197 (65%), Gaps = 28/197 (14%)
Query: 19 PSLVSKRPRTDY-DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
PSL KR R DY D P G +++ YY R++ +RD + LGASYDRYLR+ + + +
Sbjct: 79 PSL--KRARPDYVDGPGGQDMAGYYPREN--AGYHSLRDNEVLGASYDRYLRNG-VPAVA 133
Query: 78 GGQSARHMSGGMPSR---------------PVDDPRIVGIGGMDPGPSAKDRALGLGGGR 122
+ +R + GGM P D+ R++G+ GMD R +G G R
Sbjct: 134 VNEPSRAVVGGMGGAGMGGAGMVGAGMSGYPGDERRMMGVVGMD------SRGMGYGA-R 186
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
E PLPPDAS+TL++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFV
Sbjct: 187 PEPPLPPDASNTLYIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFV 246
Query: 183 DFVSPAHAATAMDALQG 199
DF SPA A A++ALQG
Sbjct: 247 DFDSPAQATIALEALQG 263
>gi|296088114|emb|CBI35503.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 133/221 (60%), Gaps = 33/221 (14%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD +W +RQ V KRPR+DYD+P SG+E+ +Y + DD G R ++
Sbjct: 32 MADRFW----SRQYFG-----VPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVK 82
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG----------- 104
D+ ++G +YD+Y + I S++ G ++ G+ + + + I G
Sbjct: 83 DSKTVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALD 140
Query: 105 MDPGPSAKDRALG------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
D PS + R G + R PLPPDASSTL+VEGLP D +RREVAHIFRPFVG
Sbjct: 141 SDLPPSGQGRRFGHQLDAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVG 200
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
YKEVRLVSKES+H G DPL+LCFVDF SPA AATA+ ALQG
Sbjct: 201 YKEVRLVSKESKHRGRDPLVLCFVDFTSPACAATALSALQG 241
>gi|359493018|ref|XP_002264314.2| PREDICTED: uncharacterized protein LOC100242739 [Vitis vinifera]
Length = 261
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 133/221 (60%), Gaps = 33/221 (14%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVP-----SGHELSSYYTRDDDRGALRGMR 55
MAD +W +RQ V KRPR+DYD+P SG+E+ +Y + DD G R ++
Sbjct: 1 MADRFW----SRQYFG-----VPKRPRSDYDLPYSGLPSGNEVHNYLVQGDDLGGPRSVK 51
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG----------- 104
D+ ++G +YD+Y + I S++ G ++ G+ + + + I G
Sbjct: 52 DSKTVGLAYDQYFQ--DIPSFTSGAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALD 109
Query: 105 MDPGPSAKDRALG------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
D PS + R G + R PLPPDASSTL+VEGLP D +RREVAHIFRPFVG
Sbjct: 110 SDLPPSGQGRRFGHQLDAIIRPSRETAPLPPDASSTLYVEGLPPDSTRREVAHIFRPFVG 169
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
YKEVRLVSKES+H G DPL+LCFVDF SPA AATA+ ALQG
Sbjct: 170 YKEVRLVSKESKHRGRDPLVLCFVDFTSPACAATALSALQG 210
>gi|238478568|ref|NP_001154354.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191964|gb|AEE30085.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 253
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 134/221 (60%), Gaps = 24/221 (10%)
Query: 1 MADGYWRYSDARQ-PQSALPSLVS-KRPRTDYD-----VPSGHELSSYYTRDDDRGALRG 53
MAD YW Q P S+ P ++ KRPR+D+ +PSG ++ SY ++D+DRG
Sbjct: 1 MADEYWNQQRQYQLPISSNPHVLPPKRPRSDFQGTPYLIPSG-DMHSYLSQDEDRGIPHS 59
Query: 54 MRDTDSLGASYDRYLRSAQI--------SSYSGGQSARHMSGGMPSRPVDDPRIVGIGGM 105
++DT S+G++YDRYL+S Q ++G R M P + G GG
Sbjct: 60 VKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQGGSNMMPGPSMGELMAGCGGS 119
Query: 106 DPG---PSAKDRALGL-----GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFV 157
P P+ +D G GR PLPPD S+TL+VEGLPS+CSRREV+HIFRPFV
Sbjct: 120 LPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPSNCSRREVSHIFRPFV 179
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
GY+EVRLV+++S+H GDP +LCFVDF + A AATA+ ALQ
Sbjct: 180 GYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQ 220
>gi|255584574|ref|XP_002533013.1| conserved hypothetical protein [Ricinus communis]
gi|223527202|gb|EEF29367.1| conserved hypothetical protein [Ricinus communis]
Length = 1031
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 132/224 (58%), Gaps = 27/224 (12%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDV-----PSGHELSSYYTRDDDRGALRGMR 55
M DGYW + +Q KR R +YD+ PS HE+ +YY RDDDR + ++
Sbjct: 776 MTDGYWNHRHQQQHPLLQSGESLKRHRPEYDIASSGLPSSHEIHNYYPRDDDRERYQAVK 835
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSA-------RHMSGGMPSRPVDD---PRIVGIGGM 105
D+ ++G++YDRYL++AQI+ S G+++ R GGM P+ D R G
Sbjct: 836 DSKTIGSAYDRYLQNAQIAPLSSGEASGLSVGFGRASGGGMTGLPILDSGMARRARPSGQ 895
Query: 106 DPGPSAKDRALGLGGG----------RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRP 155
D + +D +G R VPLP DASSTL+VEGLP RREVAHIFRP
Sbjct: 896 DLASNGRD--IGFVSQPPANKIARPVRETVPLPQDASSTLYVEGLPPGSKRREVAHIFRP 953
Query: 156 FVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
FVGYKEVRLVSKES++ DP+ILCFVDF A AATAM ALQG
Sbjct: 954 FVGYKEVRLVSKESKNRTRDPIILCFVDFDDAACAATAMSALQG 997
>gi|116781380|gb|ABK22075.1| unknown [Picea sitchensis]
Length = 265
Score = 152 bits (385), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 134/225 (59%), Gaps = 26/225 (11%)
Query: 1 MADGYW-RYSDARQPQSALPSLVSKRPRTDYDVPSG--HELSSYYTRDD---DRGALRGM 54
M D YW R++ R +SA + +KRPR +YD+ + + Y R+D D + R +
Sbjct: 1 MGDTYWNRFAAERDGRSAALASAAKRPRNEYDLLTSGSRDGPGYLPREDPRLDERSRRLL 60
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSA-----------RHMSGGMPSRPVDDPRIVGIG 103
R+TD LG +Y+RY R+ S S G +A R G+ +DD ++G
Sbjct: 61 RETDPLGPAYERYARNGLPSYGSSGLNAGDLGGLGMGLGRSAGSGLGGSALDDQVLMGRR 120
Query: 104 -GMDPGPSAKDRALGLGGGRSEVPL--------PPDASSTLFVEGLPSDCSRREVAHIFR 154
MD G K + LG + PL PPDAS+TLFVEGLP C+RRE AHIFR
Sbjct: 121 LSMDAGLGGKGQGLGFKDSQLRDPLRRPDNDHLPPDASNTLFVEGLPPKCTRREAAHIFR 180
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
PFVG+KEVRLV+KE+R+PGG+PL+LCFVDF +P AATAM+ALQG
Sbjct: 181 PFVGFKEVRLVNKEARNPGGEPLVLCFVDFANPNCAATAMEALQG 225
>gi|186478724|ref|NP_173554.3| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
gi|332191963|gb|AEE30084.1| nucleic acid/nucleotide binding protein [Arabidopsis thaliana]
Length = 421
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 119/187 (63%), Gaps = 17/187 (9%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQI--------SSYSGG 79
T Y +PSG ++ SY ++D+DRG ++DT S+G++YDRYL+S Q ++G
Sbjct: 203 TPYLIPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGV 261
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPG---PSAKDRALG----LG-GGRSEVPLPPDA 131
R M P + G GG P P+ +D G +G GR PLPPD
Sbjct: 262 GMVRQGGSNMMPGPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDV 321
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+TL+VEGLPS+CSRREV+HIFRPFVGY+EVRLV+++S+H GDP +LCFVDF + A AA
Sbjct: 322 SNTLYVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAA 381
Query: 192 TAMDALQ 198
TA+ ALQ
Sbjct: 382 TALSALQ 388
>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|119360107|gb|ABL66782.1| At1g76940 [Arabidopsis thaliana]
gi|332197785|gb|AEE35906.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 233
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 127/210 (60%), Gaps = 19/210 (9%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPS-----GHELSSYYTRDDDRGALRGMR 55
MADGYW + ++ Q P KRPR+D++ PS GH YY RD+D +
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHG-GGYYPRDEDLD----VP 52
Query: 56 DTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPS----RPVDD--PRIVGIGGMDPGP 109
DT ++G++YDRYL+S Q R GG + +DD R G+ +D GP
Sbjct: 53 DTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGP 112
Query: 110 SAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
+ LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S
Sbjct: 113 NGHTIGFDPPEPVGRRNLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDS 172
Query: 170 RHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+H GDP++LCFVDF +PA AATA+ ALQG
Sbjct: 173 KHRNGDPIVLCFVDFTNPACAATALSALQG 202
>gi|162462145|ref|NP_001105534.1| meg5 protein [Zea mays]
gi|47078331|gb|AAT09814.1| MEG5 [Zea mays]
Length = 163
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 69/107 (64%), Positives = 86/107 (80%), Gaps = 7/107 (6%)
Query: 94 VDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIF 153
VD R++G+ GMD R +G GG R E PLPPDASSTL++EGLP++C+RREV+HIF
Sbjct: 6 VDGQRMMGVVGMD------SRGMGYGG-RPEPPLPPDASSTLYIEGLPANCTRREVSHIF 58
Query: 154 RPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
RPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++ALQG
Sbjct: 59 RPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATIALEALQGH 105
>gi|242081967|ref|XP_002445752.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
gi|241942102|gb|EES15247.1| hypothetical protein SORBIDRAFT_07g025090 [Sorghum bicolor]
Length = 203
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 109/184 (59%), Gaps = 36/184 (19%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRP---- 93
++ YY R+ DR +RD D++GASYDRYLR+ ++S + R G
Sbjct: 1 MTGYYPRETDRAGYHSLRDNDAIGASYDRYLRNG-MASVGANDTTRAAGMGAGMGAGMAA 59
Query: 94 ------------------VDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTL 135
VDD R++G GGR E PLPPDAS TL
Sbjct: 60 GMGAGMGAAMGAGMAGYGVDDRRMMG-------------VGMGYGGRPEPPLPPDASPTL 106
Query: 136 FVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMD 195
++EGLP++C+RREV+HIFRPFVG++EVRLV+KESRHPGGDP +LCFVDF +PA A A++
Sbjct: 107 YIEGLPANCTRREVSHIFRPFVGFREVRLVNKESRHPGGDPHVLCFVDFDNPAQATIALE 166
Query: 196 ALQG 199
ALQG
Sbjct: 167 ALQG 170
>gi|297850552|ref|XP_002893157.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
gi|297338999|gb|EFH69416.1| hypothetical protein ARALYDRAFT_472365 [Arabidopsis lyrata subsp.
lyrata]
Length = 411
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 115/190 (60%), Gaps = 28/190 (14%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSG 87
T Y +PSG + SY +RD+DRG ++DT ++G++YD+YL + Q S ++
Sbjct: 200 TPYVMPSGG-MHSYLSRDEDRGIPHSVKDTRTIGSAYDQYLNN-QTPSVPSEEAGPFNGA 257
Query: 88 GMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG---------GRS--EVPLPPDASSTLF 136
GM + G M PGP + G GG GR+ PLPPD S+TL+
Sbjct: 258 GMGRQ--------GGNNMMPGPPMGELMAGRGGSFPSDFRPNGRAIGREPLPPDVSNTLY 309
Query: 137 VEGLPSDCSRREVA-------HIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
VEGLPS+CSRRE +FRPFVGY+EVRLV+K+S+H GDP++LCFVDF +PA
Sbjct: 310 VEGLPSNCSRRENVLSCSLSLTVFRPFVGYREVRLVTKDSKHRSGDPVVLCFVDFENPAC 369
Query: 190 AATAMDALQG 199
AATA+ ALQG
Sbjct: 370 AATALSALQG 379
>gi|413953429|gb|AFW86078.1| hypothetical protein ZEAMMB73_802063 [Zea mays]
Length = 130
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 59/86 (68%), Positives = 74/86 (86%)
Query: 114 RALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
R +G GG E PLPPDAS+TL++EG+PSDC+RREV+HIFRPFVG++EVRLV+KE +HPG
Sbjct: 10 RNIGFVGGMPEPPLPPDASNTLYIEGVPSDCTRREVSHIFRPFVGFREVRLVNKEPKHPG 69
Query: 174 GDPLILCFVDFVSPAHAATAMDALQG 199
GDP++LCFVDF P +A A+DALQG
Sbjct: 70 GDPIVLCFVDFAEPTQSAIALDALQG 95
>gi|147806465|emb|CAN74250.1| hypothetical protein VITISV_019089 [Vitis vinifera]
Length = 337
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 115/214 (53%), Gaps = 46/214 (21%)
Query: 32 VPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSA-------------QISSYSG 78
+PSG+E+ +Y + DD G R ++D+ ++G +YD+Y + I S++
Sbjct: 53 LPSGNEVHNYLVQGDDLGGPRSVKDSKTVGLAYDQYFQDVCALKPEPMFILIRHIPSFTS 112
Query: 79 GQSARHMSGGMPSRPVDDPRIVGIGG-----------MDPGPSAKDRALG------LGGG 121
G ++ G+ + + + I G D PS R G +
Sbjct: 113 GAASDFRGVGLGTATGEAISGLSISGPAVMDHLEALDSDLPPSGXGRRFGHQLDAIIRPS 172
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVA----------------HIFRPFVGYKEVRLV 165
R PLPPDASSTL+VEGLP D +RREVA +IFRPFVGYKEVRLV
Sbjct: 173 RETAPLPPDASSTLYVEGLPPDSTRREVARILQDVITLPRNYCDSYIFRPFVGYKEVRLV 232
Query: 166 SKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
SKES+H G DPL+LCFVDF SPA AATA+ ALQG
Sbjct: 233 SKESKHRGRDPLVLCFVDFTSPACAATALSALQG 266
>gi|357443731|ref|XP_003592143.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355481191|gb|AES62394.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|388515921|gb|AFK46022.1| unknown [Medicago truncatula]
Length = 147
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/111 (62%), Positives = 81/111 (72%), Gaps = 11/111 (9%)
Query: 99 IVGIGGMDPGPSAKDRALGLGG----------GRSEVPLPPDASSTLFVEGLPSDCSRRE 148
+ G+GG P S R + GG G +PLP DASSTL+VEGLPSD ++RE
Sbjct: 4 LSGVGG-GPDLSRNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKRE 62
Query: 149 VAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VAHIFRPFVGY+EVRLV+KES+H GGDPLILCFVDF +PA AATA+ ALQG
Sbjct: 63 VAHIFRPFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQG 113
>gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana tabacum]
Length = 183
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/190 (47%), Positives = 115/190 (60%), Gaps = 32/190 (16%)
Query: 1 MADGYW-RYSDARQPQSALPSLVSKRPRTDY--DVP-----SGHELSSYYTRDDDRGALR 52
M D YW ++ +A PQSA + KRPR++Y D+P S HE+ Y RDDDRG R
Sbjct: 1 MGDAYWNQHREAPLPQSAG---LLKRPRSEYVPDLPPSGMSSAHEMHHYLGRDDDRGGPR 57
Query: 53 GMRDTDSLGASYDRYLRS--------AQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGG 104
+ DT S+G++YDRYL+S + ++Y G AR +GG+ S PV DP G
Sbjct: 58 -VVDTQSIGSAYDRYLQSSQLSSLSVGEANNYKGVGLARAGAGGISSLPVRDPLPSARG- 115
Query: 105 MDPGPSAKDRALGLGGG---------RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRP 155
P + RA+ L G R +PLPPDAS+TL++EGLP+D SRREVAHIFRP
Sbjct: 116 --PELAPNGRAMVLRGQMPVESLPRPRETLPLPPDASNTLYIEGLPADSSRREVAHIFRP 173
Query: 156 FVGYKEVRLV 165
FVGYKEVRLV
Sbjct: 174 FVGYKEVRLV 183
>gi|116781833|gb|ABK22259.1| unknown [Picea sitchensis]
Length = 274
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 66/78 (84%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
R + LPPDAS+TLFVEGLP+DC+RRE AHIFRPF+G+KEVRLV KE R PGGDPL+LCF
Sbjct: 147 RPDEHLPPDASNTLFVEGLPADCTRREAAHIFRPFIGFKEVRLVQKEPRRPGGDPLVLCF 206
Query: 182 VDFVSPAHAATAMDALQG 199
VDF AATA++ALQG
Sbjct: 207 VDFTDARCAATALEALQG 224
>gi|334183951|ref|NP_001185414.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332197786|gb|AEE35907.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 179
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 102/199 (51%), Gaps = 51/199 (25%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
MADGYW + ++ Q P KRPR+D+ G + T DD
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFGGGGGGGGGNVQTIDD-------------- 43
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGG 120
LR + G + H G P PV
Sbjct: 44 -----FMLRRGGVLPLDHGPNG-HTIGFDPPEPV-------------------------- 71
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S+H GDP++LC
Sbjct: 72 GRRN--LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLC 129
Query: 181 FVDFVSPAHAATAMDALQG 199
FVDF +PA AATA+ ALQG
Sbjct: 130 FVDFTNPACAATALSALQG 148
>gi|26450151|dbj|BAC42194.1| unknown protein [Arabidopsis thaliana]
Length = 156
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 67/73 (91%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DAS+TL+VEGLPS+CSRREVAHIFRPFVGY+EVRLV+K+S+H GDP++LCFVDF +
Sbjct: 53 LPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTKDSKHRNGDPIVLCFVDFTN 112
Query: 187 PAHAATAMDALQG 199
PA AATA+ ALQG
Sbjct: 113 PACAATALSALQG 125
>gi|413953431|gb|AFW86080.1| hypothetical protein ZEAMMB73_802063, partial [Zea mays]
Length = 177
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 81/127 (63%), Gaps = 9/127 (7%)
Query: 31 DVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSA---RHMSG 87
DVP + + YY RD++R R RDT+SL ASY+R+LR+ QI S+ GG + R G
Sbjct: 42 DVPGAPDTAGYYPRDEERAGYRAARDTESLNASYERFLRTGQIQSFGGGHAGEPIRPAVG 101
Query: 88 GMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRR 147
G + PVDD ++ GMD R +G GG E PLPPDAS+TL++EG+PSDC+RR
Sbjct: 102 GNAAYPVDDRSMMAARGMD------SRNIGFVGGMPEPPLPPDASNTLYIEGVPSDCTRR 155
Query: 148 EVAHIFR 154
EV+ I R
Sbjct: 156 EVSRILR 162
>gi|168024982|ref|XP_001765014.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683823|gb|EDQ70230.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 79/115 (68%), Gaps = 10/115 (8%)
Query: 95 DDPRIVG--IGGMDPGPSAKDRALGLGGGRSE--------VPLPPDASSTLFVEGLPSDC 144
D+ +++G +G +D G + ALGL GG E LPPDASSTLFV+GLP DC
Sbjct: 20 DESQLMGARMGPLDVGMGGRPGALGLNGGAPEPDVLRGGLEVLPPDASSTLFVDGLPQDC 79
Query: 145 SRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
SRRE AHIFRPF+G+KEVRLV K+++ G ++LCFV+F AATA++ALQG
Sbjct: 80 SRREAAHIFRPFIGFKEVRLVHKDAKRADGGKVVLCFVEFADARCAATALEALQG 134
>gi|302760451|ref|XP_002963648.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
gi|300168916|gb|EFJ35519.1| hypothetical protein SELMODRAFT_69289 [Selaginella moellendorffii]
Length = 92
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 62/73 (84%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DASSTLFV+GLPSDC+RRE AHIFRPF+G+KEVRLV K+++ G+ L+LCFV+F+
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRTTGEKLVLCFVEFMD 60
Query: 187 PAHAATAMDALQG 199
AATA++ALQG
Sbjct: 61 AKCAATALEALQG 73
>gi|302785932|ref|XP_002974737.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
gi|300157632|gb|EFJ24257.1| hypothetical protein SELMODRAFT_59352 [Selaginella moellendorffii]
Length = 92
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 62/73 (84%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LP DASSTLFV+GLPSDC+RRE AHIFRPF+G+KEVRLV K+++ G+ L+LCFV+F+
Sbjct: 1 LPHDASSTLFVDGLPSDCTRREAAHIFRPFIGFKEVRLVHKDAKRATGEKLVLCFVEFMD 60
Query: 187 PAHAATAMDALQG 199
AATA++ALQG
Sbjct: 61 AKCAATALEALQG 73
>gi|313761403|gb|ADR79706.1| RNA binding protein U620 [Marsilea vestita]
Length = 118
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/70 (68%), Positives = 60/70 (85%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
DA+STL+VEG+P+DCSRRE AHIFRPFVG+KEVRLV K+++ PGGD +LCFVDF P
Sbjct: 1 DATSTLYVEGVPADCSRREAAHIFRPFVGFKEVRLVRKDAKRPGGDQFVLCFVDFTDPKC 60
Query: 190 AATAMDALQG 199
A+ A++ALQG
Sbjct: 61 ASIALEALQG 70
>gi|302771087|ref|XP_002968962.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
gi|302816665|ref|XP_002990011.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300142322|gb|EFJ09024.1| hypothetical protein SELMODRAFT_38125 [Selaginella moellendorffii]
gi|300163467|gb|EFJ30078.1| hypothetical protein SELMODRAFT_38126 [Selaginella moellendorffii]
Length = 73
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/73 (63%), Positives = 62/73 (84%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+AS+TLFV+GLP DC+RRE AHIFRPF+G+KEVR+V K+++ G+ ++LCFV+F
Sbjct: 1 LPPEASATLFVDGLPIDCTRREAAHIFRPFIGFKEVRVVHKDAKRAVGEKIVLCFVEFAD 60
Query: 187 PAHAATAMDALQG 199
P AATA++ALQG
Sbjct: 61 PRCAATALEALQG 73
>gi|217075194|gb|ACJ85957.1| unknown [Medicago truncatula]
Length = 107
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60
M+D YWRY++ +Q A P++ KRPRT+YDV H L++Y+ DDDRG L+ +RDT+SL
Sbjct: 1 MSDAYWRYAEPQQ--HAPPTIPGKRPRTEYDVSGVHNLANYFPHDDDRGRLQVIRDTESL 58
Query: 61 GASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGM 105
ASY+RYLR+A ISS+ GQS R + GG+PS +DD + +G +
Sbjct: 59 DASYERYLRNA-ISSHGSGQSTRTIDGGVPSHSIDDSHVTSMGEL 102
>gi|225429574|ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
vinifera]
gi|296081671|emb|CBI20676.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 109/214 (50%), Gaps = 24/214 (11%)
Query: 1 MADGYWRYSDARQ----PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRD 56
MAD YWR P+S+ P + D V + H L + +D GA
Sbjct: 1 MADPYWRRGAPSDRGSIPRSSFPGYLP----LDPSVSAAHHL---WGTNDLHGAPSDYPP 53
Query: 57 TDSL----GASYDRYLRSAQISSYS--GGQSARHMSGGMPSRPVDDPRIVG-----IGGM 105
D L GA + ++ GG +A G P+ PV+DP ++G G+
Sbjct: 54 KDILPVRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPN-PVEDPNLIGQRRDVAHGI 112
Query: 106 DPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
PG +R G S +P P S+ LFV+GLP DC+RREV H+FRPF+G+KE+R+V
Sbjct: 113 SPGIPDIERPSSFGNVES-LPPPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVV 171
Query: 166 SKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
KE RH G ++LCFV+F + + TA++ALQG
Sbjct: 172 HKEPRHSGDKAMVLCFVEFNDASCSRTALEALQG 205
>gi|224286216|gb|ACN40817.1| unknown [Picea sitchensis]
Length = 308
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 59/72 (81%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P ++S+T+F+EGLP+DCSRREVAHIFRPF+GYK+++++ KE R GG+P +LCFV+F
Sbjct: 199 PDESSNTIFIEGLPADCSRREVAHIFRPFIGYKQIKVIHKEPRRAGGEPYVLCFVEFTDA 258
Query: 188 AHAATAMDALQG 199
A TA+ AL+G
Sbjct: 259 KCALTALSALKG 270
>gi|8920632|gb|AAF81354.1|AC036104_3 Contains weak similarity to bab503 major core protein from Simian
T-cell lymphotrophic virus type 1 gb|AF230486
[Arabidopsis thaliana]
Length = 430
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 97/187 (51%), Gaps = 40/187 (21%)
Query: 28 TDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQI--------SSYSGG 79
T Y +PSG ++ SY ++D+DRG ++DT S+G++YDRYL+S Q ++G
Sbjct: 203 TPYLIPSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGV 261
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPG---PSAKDRALG----LG-GGRSEVPLPPDA 131
R M P + G GG P P+ +D G +G GR PLPPD
Sbjct: 262 GMVRQGGSNMMPGPSMGELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDV 321
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+TL+VEGLPS+CSRRE + GDP +LCFVDF + A AA
Sbjct: 322 SNTLYVEGLPSNCSRRERS-----------------------GDPTVLCFVDFENSACAA 358
Query: 192 TAMDALQ 198
TA+ ALQ
Sbjct: 359 TALSALQ 365
>gi|224088786|ref|XP_002308540.1| predicted protein [Populus trichocarpa]
gi|222854516|gb|EEE92063.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 57/74 (77%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFV 185
P+P S+ LFV+GLP+DC+RREV H+FRPF+GYKE+R+V KE+R G +LCFV+F
Sbjct: 167 PVPKGESNILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFT 226
Query: 186 SPAHAATAMDALQG 199
AATAM+ALQG
Sbjct: 227 DANCAATAMEALQG 240
>gi|115480271|ref|NP_001063729.1| Os09g0527100 [Oryza sativa Japonica Group]
gi|113631962|dbj|BAF25643.1| Os09g0527100 [Oryza sativa Japonica Group]
Length = 149
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 50 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 108
Query: 192 TAMDALQG 199
A++ LQG
Sbjct: 109 AALETLQG 116
>gi|215707027|dbj|BAG93487.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 135
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 36 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 94
Query: 192 TAMDALQG 199
A++ LQG
Sbjct: 95 AALETLQG 102
>gi|215693881|dbj|BAG89080.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 119
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 78
Query: 192 TAMDALQG 199
A++ LQG
Sbjct: 79 AALETLQG 86
>gi|218202488|gb|EEC84915.1| hypothetical protein OsI_32114 [Oryza sativa Indica Group]
gi|222641952|gb|EEE70084.1| hypothetical protein OsJ_30080 [Oryza sativa Japonica Group]
Length = 119
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KESRH G L LCFVDF SP A
Sbjct: 20 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKESRHAGSCNL-LCFVDFSSPPEAR 78
Query: 192 TAMDALQG 199
A++ LQG
Sbjct: 79 AALETLQG 86
>gi|357465775|ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355492220|gb|AES73423.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 229
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 62/101 (61%)
Query: 99 IVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVG 158
++G+ P P A + +P+ S+ LFV GLP DC+RREV H+FRPF+G
Sbjct: 99 LLGVSTGVPDPIANNERSISKSNYDALPVSAAESNILFVGGLPKDCTRREVGHLFRPFIG 158
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
YK++++V KE R G +I CFV+F P A TAM+ALQG
Sbjct: 159 YKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCALTAMEALQG 199
>gi|294463261|gb|ADE77166.1| unknown [Picea sitchensis]
Length = 376
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 88/161 (54%), Gaps = 16/161 (9%)
Query: 53 GMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSG---GMPSRPV-----DDPRIVGIGG 104
G R+ D L D R I+ +GG A G G+ S+ V DD ++G G
Sbjct: 175 GWRERDPLIGGRD-LFRDKTING-TGGMHANDFEGTVLGIGSKRVHSASFDDTSLIGSGS 232
Query: 105 -MDPGPSAKDRALGLGGGRSEVPLPPDASST-----LFVEGLPSDCSRREVAHIFRPFVG 158
D G + +LG G ++ L + + LF++GLP DC+ RE AHIFRPF+G
Sbjct: 233 RFDRGMGSLQGSLGRDGHGRDIALTGGGADSAREPVLFIDGLPLDCTVREAAHIFRPFIG 292
Query: 159 YKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+KEVR+V KE + PGG+ +LCFV+F HAA A +ALQG
Sbjct: 293 FKEVRVVHKEPKRPGGEKSVLCFVEFTDLRHAAIAREALQG 333
>gi|115480273|ref|NP_001063730.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|52077323|dbj|BAD46364.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113631963|dbj|BAF25644.1| Os09g0527500 [Oryza sativa Japonica Group]
gi|218202489|gb|EEC84916.1| hypothetical protein OsI_32115 [Oryza sativa Indica Group]
gi|222641953|gb|EEE70085.1| hypothetical protein OsJ_30081 [Oryza sativa Japonica Group]
Length = 235
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S TL+VEGLPS+C++REVAHIFRPF G++EVRLV+KE RH G L LCFVDF SP A
Sbjct: 136 SRTLYVEGLPSNCTKREVAHIFRPFSGFREVRLVNKEIRHAGSCNL-LCFVDFSSPPEAR 194
Query: 192 TAMDALQG 199
A++ LQG
Sbjct: 195 AALETLQG 202
>gi|449447147|ref|XP_004141330.1| PREDICTED: uncharacterized protein LOC101211987 [Cucumis sativus]
gi|449486681|ref|XP_004157367.1| PREDICTED: uncharacterized protein LOC101228687 [Cucumis sativus]
Length = 246
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 126 PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFV 185
P P S+ LFV+GLP+DC+RREV H+FRPF+GYK++R+V KE R G ++LCFV+FV
Sbjct: 141 PSPLRESNVLFVDGLPTDCTRREVGHLFRPFMGYKDIRVVHKEPRRTGDKAMVLCFVEFV 200
Query: 186 SPAHAATAMDALQG 199
+ AM+ALQG
Sbjct: 201 EAKFSQAAMEALQG 214
>gi|388521817|gb|AFK48970.1| unknown [Lotus japonicus]
Length = 229
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 94/173 (54%), Gaps = 24/173 (13%)
Query: 38 LSSYYTRDDDRGALRGMRDTDSLGASY-DRYLRSAQISSYSGGQSARHMSGGMPSRPVDD 96
L+S Y R + LRG +GA Y + +++ YS A + SR + +
Sbjct: 37 LASPYPRFSNSAELRG------IGADYLQNDINLSRVGPYSSVDDA------VSSRVLSE 84
Query: 97 PRIVGIGGMDPGP---SAKDRALGLGGG-RSEVPLPPDA------SSTLFVEGLPSDCSR 146
P I G +D P + +D +LG+ SE P+P S+ LFV+ LP DC+R
Sbjct: 85 PNIKGYSPLD-DPVLRTKRDTSLGVNPDVSSERPIPKANREGLADSNVLFVDVLPRDCTR 143
Query: 147 REVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
REV H+FRPF+GYK++R+V KE R G ++LCFV+F A TAM+ALQG
Sbjct: 144 REVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCALTAMEALQG 196
>gi|356514689|ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
Length = 228
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P+ S+ LFV GLP+DC+RREV H+FRPF+GYK++R+V KE R G + LCFV+F
Sbjct: 113 LPISAADSNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEF 172
Query: 185 VSPAHAATAMDALQG 199
V A TAM+ALQG
Sbjct: 173 VDSKCALTAMEALQG 187
>gi|218197575|gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
Length = 232
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 6/83 (7%)
Query: 116 LGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
L L G R D S+ LFV+GLP+DC+RREVAH+FRPFVG+K++RLV KE RH
Sbjct: 117 LNLDGPRE------DESNILFVDGLPTDCTRREVAHLFRPFVGFKDIRLVHKEPRHSSDR 170
Query: 176 PLILCFVDFVSPAHAATAMDALQ 198
+LCFV+F A TAM+ALQ
Sbjct: 171 AYVLCFVEFSDAKCAITAMEALQ 193
>gi|357110782|ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
distachyon]
Length = 209
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 51/69 (73%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D S+ LFV+GLP+DC RREVAH+FRPFVG+K++RLV KE R G +LCFV+F
Sbjct: 103 DESNILFVDGLPTDCKRREVAHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKC 162
Query: 190 AATAMDALQ 198
A TAM ALQ
Sbjct: 163 AFTAMQALQ 171
>gi|224033783|gb|ACN35967.1| unknown [Zea mays]
Length = 331
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 8/80 (10%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLIL 179
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H L
Sbjct: 230 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH-------L 282
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF +PA A AM LQG
Sbjct: 283 CFVDFATPAQAFFAMRNLQG 302
>gi|293334753|ref|NP_001168219.1| hypothetical protein [Zea mays]
gi|223946801|gb|ACN27484.1| unknown [Zea mays]
gi|414591373|tpg|DAA41944.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 441
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 8/80 (10%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLIL 179
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H L
Sbjct: 340 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH-------L 392
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF +PA A AM LQG
Sbjct: 393 CFVDFATPAQAFFAMRNLQG 412
>gi|363807398|ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
gi|255647054|gb|ACU23995.1| unknown [Glycine max]
Length = 220
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 53/75 (70%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P+ S+ LFV GLP DC+RREV H+FRPF+GYK++R+V KE R G + LCFV+F
Sbjct: 112 LPISAADSNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEF 171
Query: 185 VSPAHAATAMDALQG 199
V A TA++ LQG
Sbjct: 172 VDSNCALTALETLQG 186
>gi|414591374|tpg|DAA41945.1| TPA: hypothetical protein ZEAMMB73_165038 [Zea mays]
Length = 469
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 8/80 (10%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLIL 179
G E LPPDA++T++VEGLP +C+RREVAHIFR ++G+ E+RLV+K S +H L
Sbjct: 340 GAPEPSLPPDATNTIYVEGLPINCTRREVAHIFRQYMGFLEMRLVNKGSNKH-------L 392
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF +PA A AM LQG
Sbjct: 393 CFVDFATPAQAFFAMRNLQG 412
>gi|255550095|ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
gi|223544584|gb|EEF46100.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ LFV+GLP+DC+RREV H+FRPF+GYK+++++ +E R G ++ CFV+F A
Sbjct: 139 SNILFVDGLPTDCTRREVGHLFRPFIGYKDIKVIHREPRRDGDKAMVYCFVEFADAKCAI 198
Query: 192 TAMDALQG 199
TAM+ALQG
Sbjct: 199 TAMEALQG 206
>gi|242045360|ref|XP_002460551.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
gi|241923928|gb|EER97072.1| hypothetical protein SORBIDRAFT_02g030530 [Sorghum bicolor]
Length = 122
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 57/80 (71%), Gaps = 8/80 (10%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLIL 179
G E LP DA+ST++VEGLP++C+RREVAHIFR ++G+ +RLV+K S RH L
Sbjct: 21 GAPEPSLPRDATSTIYVEGLPTNCTRREVAHIFRQYMGFLGMRLVNKGSNRH-------L 73
Query: 180 CFVDFVSPAHAATAMDALQG 199
CFVDF +PA A AM LQG
Sbjct: 74 CFVDFATPAQAFLAMRTLQG 93
>gi|307109197|gb|EFN57435.1| hypothetical protein CHLNCDRAFT_142904 [Chlorella variabilis]
Length = 529
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 7/88 (7%)
Query: 119 GGGRSEV-------PLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GG R E+ PPDA +TL++EGLPSD +RRE+ HIFR G++ +RLV K+S+
Sbjct: 406 GGQRGEILAPTAMRQYPPDACNTLYIEGLPSDVTRRELGHIFRSREGFRSLRLVIKDSKK 465
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
G+ L++ FV++ S AA AMD LQG
Sbjct: 466 HVGEKLVMAFVEYSSTYFAAQAMDTLQG 493
>gi|212722122|ref|NP_001131419.1| uncharacterized protein LOC100192748 [Zea mays]
gi|194691466|gb|ACF79817.1| unknown [Zea mays]
Length = 270
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 84/164 (51%), Gaps = 36/164 (21%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R G
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSG 233
Query: 174 GDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFYQIAC 217
+LCFV+F + A T M ALQG SN V F + C
Sbjct: 234 DKAYVLCFVEFENAKFARTPMQALQG-------SNSVSFELLIC 270
>gi|226492197|ref|NP_001148276.1| LOC100281884 [Zea mays]
gi|195617106|gb|ACG30383.1| nucleic acid binding protein [Zea mays]
Length = 297
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 78/146 (53%), Gaps = 29/146 (19%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R G
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPRRSG 233
Query: 174 GDPLILCFVDFVSPAHAATAMDALQG 199
+LCFV+F + A T M ALQG
Sbjct: 234 DKAYVLCFVEFENAKFARTPMQALQG 259
>gi|403347348|gb|EJY73094.1| RRM domain containing protein [Oxytricha trifallax]
Length = 429
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+ +P+P +A++T++VEGLP D + REVAHIFRPF+G+K++RL+ ++++ G + F
Sbjct: 303 KHNLPIPKNATNTVYVEGLPHDTTEREVAHIFRPFLGFKQLRLIPRDTK--DGQRVHFAF 360
Query: 182 VDFVSPAHAATAMDALQG 199
DF S ++ LQG
Sbjct: 361 ADFESVYQTTMVINTLQG 378
>gi|222634953|gb|EEE65085.1| hypothetical protein OsJ_20124 [Oryza sativa Japonica Group]
Length = 236
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 18/146 (12%)
Query: 93 PVDDPRIV------GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSR 146
P++DP +V G P L L G R D S+ LFV+GLP+DC+R
Sbjct: 88 PLEDPALVRRSSSLGKTASIPDVEHPRPLLNLDGPRE------DESNILFVDGLPTDCTR 141
Query: 147 REVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNI--- 203
REVAH+FRPFVG+K++RLV KE RH P F+ + T + L S +
Sbjct: 142 REVAHLFRPFVGFKDIRLVHKEPRHVRAFPFQCINFFFLVEKYGWTVL--LLNNSQVYAC 199
Query: 204 ICLSNLVVFYQIACEYISD-KICVHI 228
IC+ L + Y + YI + IC +
Sbjct: 200 ICIHILELRYVRSTTYIIECNICFSV 225
>gi|147810268|emb|CAN75823.1| hypothetical protein VITISV_004156 [Vitis vinifera]
Length = 441
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 11/114 (9%)
Query: 94 VDDPRIVG-----IGGMDPGPSAKDRALGLGGGRSEVPLPP--DASSTLFVEGLPSDCSR 146
+++P ++G G+ PG +R L R+ LPP S+ LFV+GLP +R
Sbjct: 289 LENPNLIGQRRDVAHGISPGIPDIERPNSL---RNVESLPPLVRESNILFVDGLPKYYTR 345
Query: 147 REVAHIFRPFVGYKEVRLVSKESRHPGGDP-LILCFVDFVSPAHAATAMDALQG 199
REV H+F PF+ +KE+R+V KE R GD ++LCFV+F + TA++ALQG
Sbjct: 346 REVGHLFLPFIDFKEIRVVHKEPRCNSGDKAMVLCFVEFNDAKCSRTALEALQG 399
>gi|145499741|ref|XP_001435855.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402991|emb|CAK68458.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
P P ++ L + D++ +L+V+G+P+D REVAHIFRP+ G++ VRL+
Sbjct: 7 PNPMFNNQYFELIRDNQQFQPQKDSTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIK 66
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
K+++ G +LCFVDF A M LQG
Sbjct: 67 KQTQ--KGREYLLCFVDFDDAFQATIVMQTLQG 97
>gi|384247133|gb|EIE20621.1| hypothetical protein COCSUDRAFT_83539 [Coccomyxa subellipsoidea
C-169]
Length = 321
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 5/99 (5%)
Query: 101 GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
+ G PGP + + E LPP+A+ TLF+ GLP ++REVAHI RP G+K
Sbjct: 112 AMNGQRPGPQVE---IVQPEAEEEEVLPPEANPTLFLSGLPLKITKREVAHILRPCEGFK 168
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
E+RLV K R+ ++ CF +F S AA AM+ LQG
Sbjct: 169 ELRLVQKVDRN--NKDVMWCFAEFSSKQLAARAMNDLQG 205
>gi|145491995|ref|XP_001431996.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399103|emb|CAK64598.1| unnamed protein product [Paramecium tetraurelia]
Length = 124
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS 166
P P ++ L + +++ +L+V+G+P+D REVAHIFRP+ G++ VRL+
Sbjct: 7 PNPMFNNQYFELIRDNQQFQPQKESTHSLYVDGIPNDAQEREVAHIFRPYPGFQRVRLIK 66
Query: 167 KESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
K+++ G +LCFVDF A M LQG
Sbjct: 67 KQTQ--KGREYLLCFVDFDDALQATIVMQTLQG 97
>gi|225429572|ref|XP_002280083.1| PREDICTED: uncharacterized protein LOC100257637 isoform 2 [Vitis
vinifera]
Length = 229
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 34/214 (15%)
Query: 1 MADGYWRYSDARQ----PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRD 56
MAD YWR P+S+ P + D V + H L + +D GA
Sbjct: 1 MADPYWRRGAPSDRGSIPRSSFPGYLP----LDPSVSAAHHL---WGTNDLHGAPSDYPP 53
Query: 57 TDSL----GASYDRYLRSAQISSYS--GGQSARHMSGGMPSRPVDDPRIVG-----IGGM 105
D L GA + ++ GG +A G P+ PV+DP ++G G+
Sbjct: 54 KDILPVRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPN-PVEDPNLIGQRRDVAHGI 112
Query: 106 DPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
PG +R G S +P P S+ LFV+GLP DC+RREV ++R+V
Sbjct: 113 SPGIPDIERPSSFGNVES-LPPPVQESNILFVDGLPKDCTRREVG----------QIRVV 161
Query: 166 SKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
KE RH G ++LCFV+F + + TA++ALQG
Sbjct: 162 HKEPRHSGDKAMVLCFVEFNDASCSRTALEALQG 195
>gi|229595477|ref|XP_001017208.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila]
gi|225565995|gb|EAR96963.3| hypothetical protein TTHERM_00194550 [Tetrahymena thermophila
SB210]
Length = 616
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 2/70 (2%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+A+++L+V+G+P D + REV+HIFRPF G++ VRL+ K R G CFVDF S
Sbjct: 452 EATNSLYVDGVPIDSNEREVSHIFRPFPGFQAVRLIRK--RTQAGREFYFCFVDFESALQ 509
Query: 190 AATAMDALQG 199
+ A+ LQG
Sbjct: 510 STIALRTLQG 519
>gi|110430655|gb|ABG73445.1| RNA recognition motif family protein [Oryza brachyantha]
Length = 237
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 41/182 (22%)
Query: 18 LPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYS 77
+PS +RP + +PSG E + L M + S Y +L + Y+
Sbjct: 65 VPSFKRQRPEY-FGMPSGQE---------NGACLEKMSQSSS--PIYGHHLNNK--IPYA 110
Query: 78 GGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFV 137
G + GGM P+ + ++G G+D +G R+ P DAS+
Sbjct: 111 GANQSAMPLGGMVGHPMHNNHMMGTTGLD--------NRNIGATRTNATSPRDASN---- 158
Query: 138 EGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDAL 197
IFRPF G++EVRLV+KESRH G L LCFVDF +P+ A +A++ L
Sbjct: 159 --------------IFRPFSGFREVRLVNKESRHAGRYNL-LCFVDFATPSEARSALETL 203
Query: 198 QG 199
QG
Sbjct: 204 QG 205
>gi|440800677|gb|ELR21712.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 341
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 88/193 (45%), Gaps = 41/193 (21%)
Query: 35 GHELSSYYTRDDDRGALRGMRDTDSLGASYDRY------------LRSAQISSYSGGQSA 82
HE S R+ D G G + D +S Y +R+A ++S
Sbjct: 122 AHEHSRNKHRERDDGKHYGSQHYDQPSSSRKGYNNGGYRHDGYGSMRAADVNSRVS---- 177
Query: 83 RHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP---------------- 126
++ G+P P+ G+ M PGP++ D + G+ + P
Sbjct: 178 --LTSGLPLVPM------GVSPMMPGPTSLDMS-GMQFYSTVAPNAQFASYVQPQAYSPQ 228
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
L PDA+ TL+VEGLP D + REVAHIFR GY +R+ KES+ LC+V+F +
Sbjct: 229 LSPDAAPTLYVEGLPLDATEREVAHIFRQMPGYLGIRIKPKESKQHPSRVFNLCWVEFET 288
Query: 187 PAHAATAMDALQG 199
+AA A+ L+G
Sbjct: 289 KYNAAVALHHLKG 301
>gi|403345552|gb|EJY72148.1| hypothetical protein OXYTRI_06855 [Oxytricha trifallax]
Length = 425
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 15/92 (16%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAH-------------IFRPFVGYKEVRLVSK 167
G + +P+P +A++T++VEG+P D S REVA IFRP+ G+K VRL+ +
Sbjct: 307 GPNIMPIPKNATNTVYVEGIPLDASEREVARKILSHFYQSFSLDIFRPYPGFKSVRLIPR 366
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
E + G+ +I CF DF + ++ LQG
Sbjct: 367 EKK--PGEKVIFCFADFENAFQTTLVINTLQG 396
>gi|303286151|ref|XP_003062365.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455882|gb|EEH53184.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 107
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%), Gaps = 7/71 (9%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES-RHPGGDPLILCFVDFVSPA 188
DAS TL++EG+P D + RE+AHIFRPF G++ RLV KE+ R P LCF +F
Sbjct: 14 DASPTLYIEGVPHDATVREIAHIFRPFDGFQSTRLVKKENVRGP------LCFAEFAGAD 67
Query: 189 HAATAMDALQG 199
A A++ LQG
Sbjct: 68 LAFAALNTLQG 78
>gi|255075217|ref|XP_002501283.1| predicted protein [Micromonas sp. RCC299]
gi|226516547|gb|ACO62541.1| predicted protein [Micromonas sp. RCC299]
Length = 323
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+AS TL + G+P D + RE+ HIFRPF G++ RLV S+ P P LCF +F +P
Sbjct: 229 NASPTLHISGVPKDATVREICHIFRPFDGFQSARLVP--SKDPERGP--LCFAEFTNPEL 284
Query: 190 AATAMDALQG 199
A A++ L+G
Sbjct: 285 AFVALETLEG 294
>gi|330840143|ref|XP_003292080.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
gi|325077715|gb|EGC31410.1| hypothetical protein DICPUDRAFT_89664 [Dictyostelium purpureum]
Length = 328
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG + P P TLFV LP D + REV+ +FR G+ +RL++KE + P
Sbjct: 236 GGHINSPPCP-----TLFVSNLPKDVTEREVSILFRFMAGFVGIRLINKEGKLP------ 284
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+CF DFV AA A+D LQG
Sbjct: 285 MCFCDFVDSQSAAMALDFLQG 305
>gi|222634952|gb|EEE65084.1| hypothetical protein OsJ_20123 [Oryza sativa Japonica Group]
Length = 180
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 152 IFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
+FRPFVG+K++RLV KE RH +LCFV+F A TAM+ALQ
Sbjct: 4 LFRPFVGFKDIRLVHKEPRHSSDRAYVLCFVEFSDAKCAITAMEALQ 50
>gi|413953214|gb|AFW85863.1| nucleic acid binding protein [Zea mays]
Length = 248
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 29/117 (24%)
Query: 77 SGGQSARHMSGGMPSRPVDDPRIVGIGGMDP----GPSAKDRALGLGGGRSEV------- 125
+GG +AR SG + +DP + G+ G+ P GP A L + G S V
Sbjct: 120 TGGATARG-SGAL-----EDPSLAGLSGLAPARALGPRALKEELDVVGRSSSVGRGASIP 173
Query: 126 ------PLP------PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+P + S+ LFV+ LP+DC+RREVAH+FR F G+K++R+V KE R
Sbjct: 174 DVEHHSSIPNFDGPSENESNILFVDCLPTDCTRREVAHLFRCFPGFKDIRVVHKEPR 230
>gi|281211458|gb|EFA85620.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 355
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
DA STLFV LP D + RE++ +FR G+ VRLV +E ++P +CF DF
Sbjct: 268 DACSTLFVSNLPKDVTERELSILFRFMRGFINVRLVQREGKYP------ICFCDFRDTLS 321
Query: 190 AATAMDALQG 199
AA AM+ L G
Sbjct: 322 AAGAMEMLNG 331
>gi|343887275|dbj|BAK61821.1| RRM-containing protein [Citrus unshiu]
Length = 231
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 91 SRPVDDPRIVGIG-GMDPG--PSAKDRALGLGG---GRSEVPLPPDASSTLFVEGLPSDC 144
S P+ DP ++G + PG P+ D G+ + PL S+ LFV+GLP+DC
Sbjct: 93 SSPLPDPNLIGQRRDIAPGINPTIPDVINGVPSSLRNNAGSPLKKGESNLLFVDGLPTDC 152
Query: 145 SRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+RREV+ I L++ S G ++LCFV+F P A TAMDAL G
Sbjct: 153 TRREVSRI-----------LLNVSSTCSGDRAMVLCFVEFDDPKCARTAMDALHG 196
>gi|302844823|ref|XP_002953951.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
gi|300260763|gb|EFJ44980.1| hypothetical protein VOLCADRAFT_106208 [Volvox carteri f.
nagariensis]
Length = 817
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 109 PSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
P+A A G G + LP DA+++L++E LP+D + RE+ HIFRPF G+ +RLV KE
Sbjct: 451 PTAALTATGKQGIAQQ--LPSDATNSLYLENLPTDVTHRELTHIFRPFAGFVTLRLVVKE 508
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
H + FVDF A AM AL G
Sbjct: 509 --HTNREKSAKAFVDFTDAQAATAAMSALNG 537
>gi|328875060|gb|EGG23425.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 302
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 123 SEVPLPP----DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
+ VP PP D STLFV LP D + RE++ +FR G+ RLV +E ++P
Sbjct: 201 ARVPPPPGQFKDPQSTLFVSNLPKDVTERELSILFRFMRGFISCRLVIREGKYP------ 254
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+CF DF A AM+ LQG
Sbjct: 255 ICFCDFRDIPSAIMAMEILQG 275
>gi|166240105|ref|XP_646953.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|165988745|gb|EAL73083.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 356
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 14/81 (17%)
Query: 127 LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
LPP +S STLFV LP D + RE++ +FR G+ +RL++KE + P
Sbjct: 258 LPPQSSISTTGMPCSTLFVSNLPKDVTERELSILFRFMRGFVGIRLINKEGKLP------ 311
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+CF DF+ + A++ LQG
Sbjct: 312 MCFCDFIDTQSSMFALEFLQG 332
>gi|281205884|gb|EFA80073.1| hypothetical protein PPL_06895 [Polysphondylium pallidum PN500]
Length = 639
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
DA++TLF LP D + RE++ +FR G+ VRLV ++ ++P +CF DF
Sbjct: 551 DANTTLFFSNLPKDVTERELSILFRFMRGFLNVRLVQRDGKYP------ICFCDFRGVPS 604
Query: 190 AATAMDALQG 199
AA AM+ L G
Sbjct: 605 AAIAMEMLNG 614
>gi|284795211|ref|NP_001165323.1| RNA binding protein with multiple splicing [Xenopus (Silurana)
tropicalis]
Length = 195
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
G + E+ LP + TLFV GLP D RE+ +FRPF GY E L+ S+ P G
Sbjct: 10 GSQDEISLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG----- 63
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV F S + A A +AL G
Sbjct: 64 -FVSFDSRSEAEAAKNALNG 82
>gi|303281170|ref|XP_003059877.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458532|gb|EEH55829.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 224
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 10/92 (10%)
Query: 110 SAKDRALGLGGGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
+AK A GGG + + P A + LFV+GLP + ++ +F+ F G+KEVR+V
Sbjct: 125 AAKAEAEARGGGSAPIRTDPSAPPNEILFVQGLPEATTAAMLSMLFQQFPGFKEVRMVEA 184
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ PG + FV+F + A+ A+ LQG
Sbjct: 185 K---PG-----IAFVEFTAETQASVALQGLQG 208
>gi|224068352|ref|XP_002302719.1| predicted protein [Populus trichocarpa]
gi|222844445|gb|EEE81992.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 88/199 (44%), Gaps = 41/199 (20%)
Query: 36 HELSSYYTRDDDRGALRGMRDTDSLGASYDRYLR------SAQISSYSGG------QSAR 83
H+ ++ +D + A MR S YD+ +R + I + + G + R
Sbjct: 63 HKGQAWVVFEDVQSASNAMRQMQSF-PFYDKPMRIQYAKTKSDIVAKADGTFVPREKRRR 121
Query: 84 HMSGGMPSRPVDDPRIVGIG---------GMDPGPSAKDRALGLGGGRS---EVPLPPDA 131
H G + D VG+G G P S + LGG +S E P PP+
Sbjct: 122 HEEKGKKKKDQHDTNQVGVGLTPAYGGAYGTTPPLS---QIPYLGGVKSMVPEAPAPPN- 177
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF++ LP++ + + +F+ + G+KEVR+V + PG + FV++ +
Sbjct: 178 -NILFIQNLPNETTTMMLQMLFQQYAGFKEVRMVETK---PG-----IAFVEYGDEMQST 228
Query: 192 TAMDALQG---QSNIICLS 207
AM ALQG Q N + ++
Sbjct: 229 VAMHALQGFKLQQNSMLIT 247
>gi|270009865|gb|EFA06313.1| hypothetical protein TcasGA2_TC009182 [Tribolium castaneum]
Length = 748
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+GLP D S+ E+ IFRPF G K VRLV + P G L +V+F A A
Sbjct: 617 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCRRDGKPKG----LAYVEFEDDASAK 671
Query: 192 TAMDALQGQS 201
AM+ G +
Sbjct: 672 KAMEKTDGMT 681
>gi|91086239|ref|XP_972538.1| PREDICTED: similar to Squamous cell carcinoma antigen recognized by
T-cells 3 (SART-3) (mSART-3) (Tumor-rejection antigen
SART3) [Tribolium castaneum]
Length = 758
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+GLP D S+ E+ IFRPF G K VRLV + P G L +V+F A A
Sbjct: 627 TNKLFVKGLPYDKSQEEIEAIFRPF-GAKTVRLVCRRDGKPKG----LAYVEFEDDASAK 681
Query: 192 TAMDALQGQS 201
AM+ G +
Sbjct: 682 KAMEKTDGMT 691
>gi|224049139|ref|XP_002196184.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 195
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG ++ LP + TLFV GLP D RE+ +FRPF GY E L+ S+ P G
Sbjct: 10 GGPADTSLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG----- 63
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV F S + A A +AL G
Sbjct: 64 -FVSFDSRSEAEAAKNALNG 82
>gi|255564206|ref|XP_002523100.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223537662|gb|EEF39285.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 254
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 13/84 (15%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F+ + G+KEVR+V ES+ PG
Sbjct: 166 GGAKSMVPEAPAPPN--NILFIQNLPNDTTTMVLQMLFQHYAGFKEVRMV--ESK-PG-- 218
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV++ + AM LQG
Sbjct: 219 ---IAFVEYADEMQSTVAMQGLQG 239
>gi|147903173|ref|NP_001083477.1| RNA binding protein with multiple splicing [Xenopus laevis]
gi|38014401|gb|AAH60391.1| MGC68512 protein [Xenopus laevis]
Length = 200
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E+ LP + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 EINLPEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVS 66
Query: 184 FVSPAHAATAMDALQG 199
F S + A A +AL G
Sbjct: 67 FDSRSEAEAAKNALNG 82
>gi|328774045|gb|EGF84082.1| hypothetical protein BATDEDRAFT_84797 [Batrachochytrium
dendrobatidis JAM81]
Length = 262
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 10/77 (12%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE LPP+ S LF++ LP+D + ++ +F F G+KEVRLV PG + FV
Sbjct: 179 SEESLPPN--SILFIQNLPTDITNASLSALFNQFPGFKEVRLV------PGRSD--IAFV 228
Query: 183 DFVSPAHAATAMDALQG 199
++ + H+A A AL G
Sbjct: 229 EYHNEMHSAIAKQALHG 245
>gi|45382377|ref|NP_990200.1| RNA-binding protein with multiple splicing [Gallus gallus]
gi|13124483|sp|Q9W6I1.1|RBPMS_CHICK RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4835860|gb|AAD30273.1|AF129933_1 RRM-type RNA-binding protein hermes [Gallus gallus]
Length = 200
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 112 KDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
KD GGG E + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 6 KDTEHTNGGGNVE-----EEVRTLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 59
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S A A A +AL G
Sbjct: 60 PVG------FVTFDSRAGAEAAKNALNG 81
>gi|452823467|gb|EME30477.1| U2 small nuclear ribonucleoprotein B'' [Galdieria sulphuraria]
Length = 250
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ G+P DCS +++ +F F GYKE RL + + R + FV+F + A A+
Sbjct: 178 LFIAGIPQDCSLQQLESLFVQFPGYKETRLAAGQER--------VAFVEFETEDQATVAL 229
Query: 195 DALQG 199
+QG
Sbjct: 230 QGMQG 234
>gi|119583856|gb|EAW63452.1| hCG14793, isoform CRA_b [Homo sapiens]
Length = 143
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQG 199
F S + A A +AL G
Sbjct: 67 SFDSRSEAEAAKNALNG 83
>gi|33342267|ref|NP_062707.1| RNA-binding protein with multiple splicing isoform 1 [Mus musculus]
gi|111185961|ref|NP_001036139.1| RNA-binding protein with multiple splicing isoform 2 [Mus musculus]
gi|20988889|gb|AAH30397.1| RNA binding protein gene with multiple splicing [Mus musculus]
gi|26334219|dbj|BAC30827.1| unnamed protein product [Mus musculus]
Length = 197
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG++E P ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNG 83
>gi|293342475|ref|XP_001059526.2| PREDICTED: uncharacterized protein LOC498642 isoform 2 [Rattus
norvegicus]
Length = 197
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG++E P ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNG 83
>gi|388501866|gb|AFK38999.1| unknown [Medicago truncatula]
Length = 234
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G E P ++ LF+E LP + + R + +F + G+KEVRL+ + PG
Sbjct: 149 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAK---PG----- 197
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FVDF ++ AM ALQG
Sbjct: 198 IAFVDFEDDGQSSMAMQALQG 218
>gi|357491327|ref|XP_003615951.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|355517286|gb|AES98909.1| U1 small nuclear ribonucleoprotein A [Medicago truncatula]
gi|388501104|gb|AFK38618.1| unknown [Medicago truncatula]
Length = 233
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G E P ++ LF+E LP + + R + +F + G+KEVRL+ + PG
Sbjct: 148 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAK---PG----- 196
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FVDF ++ AM ALQG
Sbjct: 197 IAFVDFEDDGQSSMAMQALQG 217
>gi|26347873|dbj|BAC37585.1| unnamed protein product [Mus musculus]
Length = 170
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG++E P ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNG 83
>gi|198423670|ref|XP_002129832.1| PREDICTED: similar to MEChanosensory abnormality family member
(mec-8) [Ciona intestinalis]
Length = 359
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
TLFV GLP+D +RE+ +FR F GY+ +R +K PG P+ + FV F S A
Sbjct: 83 TLFVSGLPADAKKRELYLLFRGFTGYEGSIIRTTAK----PGKAPVPVGFVTFDSRGEAD 138
Query: 192 TAMDALQG 199
A ++LQG
Sbjct: 139 LAKNSLQG 146
>gi|149057909|gb|EDM09152.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057914|gb|EDM09157.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
gi|149057919|gb|EDM09162.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_c [Rattus norvegicus]
Length = 107
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 119 GGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG+ SE L + TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQGQSNII 204
P G FV F S + A A +AL S +
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNMSSQYL 88
>gi|13124485|sp|Q9WVB0.1|RBPMS_MOUSE RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|5081739|gb|AAD39515.1|AF148511_1 hermes [Mus musculus]
Length = 197
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG++E P ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNG 83
>gi|239790913|dbj|BAH71988.1| ACYPI002883 [Acyrthosiphon pisum]
Length = 169
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H G L +VDF AA A+
Sbjct: 23 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGHSKG----LAYVDFEDEVSAAQAL 78
Query: 195 DALQGQSNII 204
L+ + II
Sbjct: 79 --LKTDNTII 86
>gi|359806644|ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
gi|255647802|gb|ACU24361.1| unknown [Glycine max]
Length = 232
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 14/92 (15%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP+A R G G E P ++ LF+E LP + + R + +F + G+KEVRL+
Sbjct: 139 GPTASFRQ---GPGAQETAAP---NNILFIENLPHETTGRMLEMLFEQYPGFKEVRLIEA 192
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ PG + FVDF ++ AM AL G
Sbjct: 193 K---PG-----IAFVDFEDEVQSSMAMQALHG 216
>gi|390333482|ref|XP_789234.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Strongylocentrotus purpuratus]
Length = 235
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 8/73 (10%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+P + ++ LF+ LP + + + +F+ F GYKEVRLV RH + FV+F +
Sbjct: 155 VPDEPNNILFLTNLPEETNELMLEVLFKQFNGYKEVRLVP--GRHD------IAFVEFAN 206
Query: 187 PAHAATAMDALQG 199
+ TA DALQG
Sbjct: 207 EQQSGTAKDALQG 219
>gi|111185959|ref|NP_001036140.1| RNA-binding protein with multiple splicing isoform 3 [Mus musculus]
gi|403420640|ref|NP_001258173.1| RNA-binding protein with multiple splicing [Rattus norvegicus]
gi|12848898|dbj|BAB28128.1| unnamed protein product [Mus musculus]
gi|12849426|dbj|BAB28336.1| unnamed protein product [Mus musculus]
Length = 220
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GGG++E P ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNG 83
>gi|313232434|emb|CBY24102.1| unnamed protein product [Oikopleura dioica]
Length = 300
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSP 187
D TLFV GLPSD +RE+ +FRP+ G++ V K + PG I + FV F S
Sbjct: 60 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESA--VLKFPQKPGKVYPIAPVAFVTFKSK 117
Query: 188 AHAATAMDALQGQS 201
A A + LQG+
Sbjct: 118 AEAQVPKEELQGEK 131
>gi|402874657|ref|XP_003901146.1| PREDICTED: uncharacterized protein LOC101014530 [Papio anubis]
Length = 427
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
G S VPL + TLFV GLP D RE+ +FRPF GY E L+ +R P G
Sbjct: 237 GASSLVPLKKEVR-TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG----- 289
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV F S A A A +AL G
Sbjct: 290 -FVIFDSRAGAEAAKNALNG 308
>gi|313221526|emb|CBY32273.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSP 187
D TLFV GLPSD +RE+ +FRP+ G++ V K + PG I + FV F S
Sbjct: 77 DEVRTLFVSGLPSDVKQRELRLLFRPYKGFESA--VLKFPQKPGKVYPIAPVAFVTFKSK 134
Query: 188 AHAATAMDALQGQS 201
A A + LQG+
Sbjct: 135 AEAQVPKEELQGEK 148
>gi|194670736|ref|XP_596374.4| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|297479609|ref|XP_002690918.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Bos
taurus]
gi|296483268|tpg|DAA25383.1| TPA: RNA binding protein with multiple splicing 2-like [Bos taurus]
Length = 188
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 11 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 63
Query: 194 MDALQG 199
+AL G
Sbjct: 64 KNALNG 69
>gi|426234121|ref|XP_004011049.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Ovis
aries]
Length = 270
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 93 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 145
Query: 194 MDALQG 199
+AL G
Sbjct: 146 KNALNG 151
>gi|255083026|ref|XP_002504499.1| predicted protein [Micromonas sp. RCC299]
gi|226519767|gb|ACO65757.1| predicted protein [Micromonas sp. RCC299]
Length = 224
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 11/89 (12%)
Query: 112 KDRALGLGGG-RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+D A G+ R++ PP+ LFV+GLP + ++ +F+ F G+KEVR+V +
Sbjct: 130 RDAASGVTAKVRTDPSAPPN--EILFVQGLPGATTAAMLSMLFQQFPGFKEVRMVEAK-- 185
Query: 171 HPGGDPLILCFVDFVSPAHAATAMDALQG 199
PG + FV+F + A A+ A+ LQG
Sbjct: 186 -PG-----IAFVEFETDAQASVALSGLQG 208
>gi|354504963|ref|XP_003514542.1| PREDICTED: RNA-binding protein with multiple splicing 2-like,
partial [Cricetulus griseus]
Length = 181
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 55
Query: 194 MDALQG 199
+AL G
Sbjct: 56 KNALNG 61
>gi|281347320|gb|EFB22904.1| hypothetical protein PANDA_002166 [Ailuropoda melanoleuca]
Length = 163
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQG 199
+AL G
Sbjct: 57 KNALNG 62
>gi|444730929|gb|ELW71298.1| RNA-binding protein with multiple splicing 2 [Tupaia chinensis]
Length = 240
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 79
Query: 194 MDALQG 199
+AL G
Sbjct: 80 KNALNG 85
>gi|440907032|gb|ELR57225.1| RNA-binding protein with multiple splicing 2, partial [Bos
grunniens mutus]
Length = 184
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 59
Query: 194 MDALQG 199
+AL G
Sbjct: 60 KNALNG 65
>gi|219121341|ref|XP_002185896.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582745|gb|ACI65366.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 226
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 124 EVPLPPDA---SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
++P P D S L + LPSDC+ + +FR + GYKEVR+ PG L
Sbjct: 142 DMPSPQDTAPPSKYLLAQNLPSDCNEMMLGMLFRQYSGYKEVRMP-----RPG-----LA 191
Query: 181 FVDFVSPAHAATAMDALQG 199
F++F HA A +AL G
Sbjct: 192 FIEFEDEPHATLARNALNG 210
>gi|351695575|gb|EHA98493.1| RNA-binding protein with multiple splicing 2, partial
[Heterocephalus glaber]
Length = 180
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQG 199
+AL G
Sbjct: 57 KNALNG 62
>gi|345795064|ref|XP_853385.2| PREDICTED: RNA-binding protein with multiple splicing 2 [Canis
lupus familiaris]
Length = 214
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 36 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 88
Query: 194 MDALQG 199
+AL G
Sbjct: 89 KNALNG 94
>gi|344293499|ref|XP_003418460.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Loxodonta africana]
Length = 183
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 7 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 59
Query: 194 MDALQG 199
+AL G
Sbjct: 60 KNALNG 65
>gi|41053746|ref|NP_956553.1| RNA binding protein with multiple splicing 2b [Danio rerio]
gi|29124508|gb|AAH48876.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|42542540|gb|AAH66414.1| Rbpms2 protein [Danio rerio]
gi|45126693|dbj|BAD12195.1| RNA binding protein [Danio rerio]
Length = 200
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP+D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 21 TLFVSGLPTDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 194 MDALQG 199
+AL G
Sbjct: 74 KNALNG 79
>gi|291402858|ref|XP_002718127.1| PREDICTED: RNA binding protein with multiple splicing 2
[Oryctolagus cuniculus]
Length = 210
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQG 199
+AL G
Sbjct: 85 KNALNG 90
>gi|338717427|ref|XP_001496966.3| PREDICTED: RNA-binding protein with multiple splicing 2 [Equus
caballus]
Length = 287
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 109 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 161
Query: 194 MDALQG 199
+AL G
Sbjct: 162 KNALNG 167
>gi|327279916|ref|XP_003224701.1| PREDICTED: RNA-binding protein with multiple splicing-like [Anolis
carolinensis]
Length = 255
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 126 PLPPDAS------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
P PP+ S TLFV GLP D RE+ +FRPF GY E L+ S+ P G
Sbjct: 69 PTPPEPSLTEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG----- 122
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV F S + A A +AL G
Sbjct: 123 -FVSFDSRSEAEAAKNALNG 141
>gi|12845642|dbj|BAB26834.1| unnamed protein product [Mus musculus]
Length = 168
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 78
Query: 194 MDALQG 199
+AL G
Sbjct: 79 KNALNG 84
>gi|397521591|ref|XP_003830876.1| PREDICTED: RNA-binding protein with multiple splicing [Pan
paniscus]
Length = 218
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 46/99 (46%), Gaps = 23/99 (23%)
Query: 117 GLGGGRSEVPLPPDASS----------------TLFVEGLPSDCSRREVAHIFRPFVGYK 160
G GG R V L P AS+ TLFV GLP D RE+ +FRPF GY
Sbjct: 31 GEGGSRERVFLCPRASAGPKLRNSKDFSETFVRTLFVSGLPLDIKPRELYLLFRPFKGY- 89
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
E L+ S+ P G FV F S + A A +AL G
Sbjct: 90 EGSLIKLTSKQPVG------FVSFDSRSEAEAAKNALNG 122
>gi|116791286|gb|ABK25922.1| unknown [Picea sitchensis]
Length = 345
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ +L + E G + F F
Sbjct: 80 DEVRTLFIAGLPDDVKHREIYNLFREFPGYRSCQLRNSE-----GGTQVYAFTVFTDQQS 134
Query: 190 AATAMDALQG 199
A AM AL G
Sbjct: 135 ALAAMHALNG 144
>gi|326926326|ref|XP_003209353.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 204
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 79
Query: 194 MDALQG 199
+AL G
Sbjct: 80 KNALNG 85
>gi|395502670|ref|XP_003755700.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Sarcophilus harrisii]
Length = 207
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 30 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 82
Query: 194 MDALQG 199
+AL G
Sbjct: 83 KNALNG 88
>gi|31980694|ref|NP_082306.2| RNA-binding protein with multiple splicing 2 [Mus musculus]
gi|81915124|sp|Q8VC52.1|RBPS2_MOUSE RecName: Full=RNA-binding protein with multiple splicing 2
gi|18255713|gb|AAH21788.1| RNA binding protein with multiple splicing 2 [Mus musculus]
gi|74140118|dbj|BAE33785.1| unnamed protein product [Mus musculus]
gi|74194800|dbj|BAE25995.1| unnamed protein product [Mus musculus]
gi|148694156|gb|EDL26103.1| RNA binding protein with multiple splicing 2 [Mus musculus]
Length = 206
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 78
Query: 194 MDALQG 199
+AL G
Sbjct: 79 KNALNG 84
>gi|410961120|ref|XP_003987133.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Felis
catus]
Length = 204
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 26 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 78
Query: 194 MDALQG 199
+AL G
Sbjct: 79 KNALNG 84
>gi|290651751|ref|NP_001166897.1| RNA binding protein with multiple splicing 2 [Rattus norvegicus]
gi|197246487|gb|AAI69038.1| Rbpms2 protein [Rattus norvegicus]
Length = 210
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQG 199
+AL G
Sbjct: 85 KNALNG 90
>gi|301770903|ref|XP_002920867.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Ailuropoda melanoleuca]
Length = 195
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 14/89 (15%)
Query: 118 LGGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
+ GG++E P+ ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 1 MXGGKAEKENTPNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSK 59
Query: 171 HPGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 60 QPVG------FVSFDSRSEAEAAKNALNG 82
>gi|301756893|ref|XP_002914317.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Ailuropoda melanoleuca]
Length = 296
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 118 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 170
Query: 194 MDALQG 199
+AL G
Sbjct: 171 KNALNG 176
>gi|328697641|ref|XP_003240396.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Acyrthosiphon pisum]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H G L +VDF AA A+
Sbjct: 708 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGHSKG----LAYVDFEDEVSAAQAL 763
>gi|328697639|ref|XP_001946245.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Acyrthosiphon pisum]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP C++ ++ +IF+P+ K+VR+V+ + H G L +VDF AA A+
Sbjct: 708 LFVKGLPFTCTKTDIENIFKPYGALKDVRVVTFRNGHSKG----LAYVDFEDEVSAAQAL 763
>gi|348588625|ref|XP_003480065.1| PREDICTED: RNA-binding protein with multiple splicing 2-like [Cavia
porcellus]
Length = 295
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 120 TLFVSGLPMDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEVA 172
Query: 194 MDALQG 199
+AL G
Sbjct: 173 KNALNG 178
>gi|194226464|ref|XP_001915758.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Equus caballus]
gi|350593440|ref|XP_003483688.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Sus scrofa]
gi|410956133|ref|XP_003984699.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Felis catus]
Length = 196
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GG++E P+ ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 NGGKAEKENTPNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNG 83
>gi|449273343|gb|EMC82847.1| RNA-binding protein with multiple splicing, partial [Columba livia]
Length = 180
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 55
Query: 194 MDALQG 199
+AL G
Sbjct: 56 KNALNG 61
>gi|397515721|ref|XP_003828094.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
paniscus]
Length = 230
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
A TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A
Sbjct: 50 AVRTLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGA 102
Query: 191 ATAMDALQG 199
A +AL G
Sbjct: 103 EAAKNALNG 111
>gi|348553688|ref|XP_003462658.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Cavia porcellus]
Length = 196
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|5803141|ref|NP_006858.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|57164969|ref|NP_001008710.1| RNA-binding protein with multiple splicing isoform A [Homo sapiens]
gi|291386102|ref|XP_002709595.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Oryctolagus cuniculus]
gi|395850272|ref|XP_003797718.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Otolemur garnettii]
gi|13124469|sp|Q93062.1|RBPMS_HUMAN RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|1669547|dbj|BAA12225.1| RBP-MS/type 1 [Homo sapiens]
gi|1669553|dbj|BAA12228.1| RBP-MS/type 4 [Homo sapiens]
gi|119583855|gb|EAW63451.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|119583857|gb|EAW63453.1| hCG14793, isoform CRA_a [Homo sapiens]
gi|383415403|gb|AFH30915.1| RNA-binding protein with multiple splicing isoform A [Macaca
mulatta]
gi|410212520|gb|JAA03479.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253370|gb|JAA14652.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294226|gb|JAA25713.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342393|gb|JAA40143.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 196
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|410925168|ref|XP_003976053.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 194
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 194 MDALQG 199
+AL G
Sbjct: 77 KNALNG 82
>gi|344281668|ref|XP_003412600.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Loxodonta africana]
Length = 196
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|402877940|ref|XP_003902666.1| PREDICTED: RNA-binding protein with multiple splicing, partial
[Papio anubis]
Length = 268
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 45/91 (49%), Gaps = 17/91 (18%)
Query: 119 GGGRSEVP-LPPDASS---------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
GGG SE P L P S TLFV GLP D RE+ +FRPF GY E L+
Sbjct: 49 GGGPSESPGLEPAVRSPRVLRATVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLT 107
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
S+ P G FV F S + A A +AL G
Sbjct: 108 SKQPVG------FVSFDSRSEAEAAKNALNG 132
>gi|119583863|gb|EAW63459.1| hCG2043421, isoform CRA_b [Homo sapiens]
gi|119583865|gb|EAW63461.1| hCG2043421, isoform CRA_b [Homo sapiens]
Length = 179
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|224062243|ref|XP_002193531.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Taeniopygia guttata]
Length = 167
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 57
Query: 194 MDALQG 199
+AL G
Sbjct: 58 KNALNG 63
>gi|431895918|gb|ELK05336.1| Ornithine decarboxylase antizyme 2, partial [Pteropus alecto]
Length = 320
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 5 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 57
Query: 194 MDALQG 199
+AL G
Sbjct: 58 KNALNG 63
>gi|387018112|gb|AFJ51174.1| u2 small nuclear ribonucleoprotein B-like [Crotalus adamanteus]
Length = 225
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
P A + G S+ PD + LF+ LP + + ++ +F F G+KEVRL
Sbjct: 123 PNQGANQNSTNAQGNASQNQQVPDNPPNHILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
V RH + FV+F + A A DALQG
Sbjct: 183 VP--GRHD------ISFVEFENEGQAGAARDALQG 209
>gi|293333676|ref|NP_001169386.1| uncharacterized protein LOC100383254 [Zea mays]
gi|224029017|gb|ACN33584.1| unknown [Zea mays]
gi|414866361|tpg|DAA44918.1| TPA: hypothetical protein ZEAMMB73_448604 [Zea mays]
Length = 233
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
LG E P PP+ + LF++ LP + + +F+ + G++EVR++ + PG
Sbjct: 146 LGKASQEPPAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAK---PG---- 196
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + AM ALQG
Sbjct: 197 -IAFVEFEDDGQSMVAMQALQG 217
>gi|108707670|gb|ABF95465.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 231
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+A ++ G LG E P PP+ + LF++ LP++ + + +F+ + G++
Sbjct: 127 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 184
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
EVR++ + PG + FV++ + + AM ALQG
Sbjct: 185 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQG 215
>gi|432919028|ref|XP_004079709.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 194
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 194 MDALQG 199
+AL G
Sbjct: 77 KNALNG 82
>gi|354474967|ref|XP_003499701.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Cricetulus griseus]
Length = 181
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 9 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 61
Query: 194 MDALQG 199
+AL G
Sbjct: 62 KNALNG 67
>gi|395850274|ref|XP_003797719.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Otolemur garnettii]
Length = 242
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQG 199
F S + A A +AL G
Sbjct: 67 SFDSRSEAEAAKNALNG 83
>gi|390468449|ref|XP_002753282.2| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Callithrix jacchus]
Length = 255
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 78 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 130
Query: 194 MDALQG 199
+AL G
Sbjct: 131 KNALNG 136
>gi|348525747|ref|XP_003450383.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 194
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 24 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 76
Query: 194 MDALQG 199
+AL G
Sbjct: 77 KNALNG 82
>gi|384950746|sp|B8AM21.1|RU2B_ORYSI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|218192634|gb|EEC75061.1| hypothetical protein OsI_11177 [Oryza sativa Indica Group]
Length = 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+A ++ G LG E P PP+ + LF++ LP++ + + +F+ + G++
Sbjct: 128 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 185
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
EVR++ + PG + FV++ + + AM ALQG
Sbjct: 186 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQG 216
>gi|115452491|ref|NP_001049846.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|122247158|sp|Q10MR0.1|RU2B_ORYSJ RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|108707669|gb|ABF95464.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548317|dbj|BAF11760.1| Os03g0298800 [Oryza sativa Japonica Group]
gi|215737098|dbj|BAG96027.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624757|gb|EEE58889.1| hypothetical protein OsJ_10509 [Oryza sativa Japonica Group]
Length = 232
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 17/99 (17%)
Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
GP+A ++ G LG E P PP+ + LF++ LP++ + + +F+ + G++
Sbjct: 128 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 185
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
EVR++ + PG + FV++ + + AM ALQG
Sbjct: 186 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQG 216
>gi|225707030|gb|ACO09361.1| U2 small nuclear ribonucleoprotein B [Osmerus mordax]
Length = 219
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 142 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 191
Query: 188 AHAATAMDALQG 199
A A A DALQG
Sbjct: 192 ARAGVAKDALQG 203
>gi|148703476|gb|EDL35423.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
gi|148703477|gb|EDL35424.1| RNA binding protein gene with multiple splicing, isoform CRA_a [Mus
musculus]
Length = 175
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 194 MDALQG 199
+AL G
Sbjct: 56 KNALNG 61
>gi|426388779|ref|XP_004060810.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Gorilla
gorilla gorilla]
Length = 229
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 114 RALGLGGGRSEVPLPPDASST-----LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
RAL L ++ P PP S LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 135 RALVL----TDSPTPPQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP-- 188
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQG----QSNIICLS 207
RH + FV+F + A A DALQG Q+N + +S
Sbjct: 189 GRHD------IAFVEFDNEVQAGAARDALQGFKITQNNAMKIS 225
>gi|426379407|ref|XP_004056389.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Gorilla
gorilla gorilla]
Length = 214
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 89
Query: 194 MDALQG 199
+AL G
Sbjct: 90 KNALNG 95
>gi|355715882|gb|AES05433.1| RNA binding protein with multiple splicing [Mustela putorius furo]
Length = 173
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 194 MDALQG 199
+AL G
Sbjct: 56 KNALNG 61
>gi|363733276|ref|XP_426296.3| PREDICTED: RNA-binding protein with multiple splicing [Gallus
gallus]
Length = 186
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 67
Query: 194 MDALQG 199
+AL G
Sbjct: 68 KNALNG 73
>gi|356573171|ref|XP_003554737.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Glycine max]
Length = 241
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V + PG
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETK---PG-- 204
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV++ + AM LQG
Sbjct: 205 ---IAFVEYGDEMQSTVAMQTLQG 225
>gi|350578519|ref|XP_003121510.3| PREDICTED: RNA-binding protein with multiple splicing 2-like [Sus
scrofa]
Length = 327
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 149 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 201
Query: 194 MDALQG 199
+AL G
Sbjct: 202 KNALNG 207
>gi|255647418|gb|ACU24174.1| unknown [Glycine max]
Length = 241
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 13/84 (15%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V + PG
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETK---PG-- 204
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV++ + AM LQG
Sbjct: 205 ---IAFVEYGDEMQSTVAMQTLQG 225
>gi|431902282|gb|ELK08783.1| RNA-binding protein with multiple splicing [Pteropus alecto]
Length = 275
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 81 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 133
Query: 194 MDALQG 199
+AL G
Sbjct: 134 KNALNG 139
>gi|226531516|ref|NP_001149883.1| spliceosomal protein [Zea mays]
gi|194696844|gb|ACF82506.1| unknown [Zea mays]
gi|195635261|gb|ACG37099.1| spliceosomal protein [Zea mays]
gi|195659375|gb|ACG49155.1| spliceosomal protein [Zea mays]
gi|413956009|gb|AFW88658.1| Spliceosomal protein [Zea mays]
Length = 233
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
LG E P PP+ + LF++ LP + + +F+ + G++EVR++ + PG
Sbjct: 146 LGKASQEPPAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAK---PG---- 196
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + AM ALQG
Sbjct: 197 -IAFVEFEDDGQSMVAMQALQG 217
>gi|57164971|ref|NP_001008711.1| RNA-binding protein with multiple splicing isoform B [Homo sapiens]
gi|1669549|dbj|BAA12226.1| RBP-MS/type 2 [Homo sapiens]
gi|119583858|gb|EAW63454.1| hCG14793, isoform CRA_c [Homo sapiens]
Length = 204
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|432092246|gb|ELK24870.1| RNA-binding protein with multiple splicing 2 [Myotis davidii]
Length = 315
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A
Sbjct: 27 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 79
Query: 194 MDALQG 199
+AL G
Sbjct: 80 KNALNG 85
>gi|297299182|ref|XP_002805345.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Macaca mulatta]
gi|297299184|ref|XP_001083170.2| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Macaca mulatta]
Length = 224
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQG 199
F S + A A +AL G
Sbjct: 67 SFDSRSEAEAAKNALNG 83
>gi|332855731|ref|XP_003316404.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Pan
troglodytes]
Length = 227
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 21/103 (20%)
Query: 114 RALGLGGGRSEVPLPPDASST-----LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
RAL L ++ P PP S LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 133 RALVL----TDSPTPPQLSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP-- 186
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQG----QSNIICLS 207
RH + FV+F + A A DALQG Q+N + +S
Sbjct: 187 GRHD------IAFVEFDNEVQAGAARDALQGFKITQNNAMKIS 223
>gi|119583864|gb|EAW63460.1| hCG2043421, isoform CRA_c [Homo sapiens]
gi|194389216|dbj|BAG65596.1| unnamed protein product [Homo sapiens]
Length = 224
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQG 199
F S + A A +AL G
Sbjct: 67 SFDSRSEAEAAKNALNG 83
>gi|395541849|ref|XP_003772849.1| PREDICTED: RNA-binding protein with multiple splicing [Sarcophilus
harrisii]
Length = 188
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 17 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 69
Query: 194 MDALQG 199
+AL G
Sbjct: 70 KNALNG 75
>gi|91078752|ref|XP_968271.1| PREDICTED: similar to U1 small nuclear ribonucleoprotein A
[Tribolium castaneum]
gi|270003743|gb|EFA00191.1| hypothetical protein TcasGA2_TC003016 [Tribolium castaneum]
Length = 214
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG +E P + LF+ LP + S ++ +F F G+KEVRLV +RH
Sbjct: 130 GGSNAEQP----PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------ 177
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FV+F + + A DALQG
Sbjct: 178 IAFVEFENELQSGAAKDALQG 198
>gi|126330763|ref|XP_001372734.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Monodelphis domestica]
Length = 186
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 15 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 67
Query: 194 MDALQG 199
+AL G
Sbjct: 68 KNALNG 73
>gi|338720949|ref|XP_003364277.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Equus caballus]
gi|350593442|ref|XP_003133441.3| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Sus scrofa]
gi|410956131|ref|XP_003984698.1| PREDICTED: RNA-binding protein with multiple splicing isoform 1
[Felis catus]
Length = 219
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
GG++E P+ ++ TLFV GLP D RE+ +FRPF GY E L+ S+
Sbjct: 3 NGGKAEKENTPNEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
P G FV F S + A A +AL G
Sbjct: 62 PVG------FVSFDSRSEAEAAKNALNG 83
>gi|224094288|ref|XP_002310126.1| predicted protein [Populus trichocarpa]
gi|222853029|gb|EEE90576.1| predicted protein [Populus trichocarpa]
Length = 323
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+P D TLFV GLP D RE+ ++FR F GY+ L R P + F F
Sbjct: 67 VPHDQVRTLFVAGLPDDIKPREMYNLFREFPGYESSHL-----RTPSQNSQPFAFATFTD 121
Query: 187 PAHAATAMDALQG 199
A AM AL G
Sbjct: 122 QPSAVAAMHALNG 134
>gi|114052324|ref|NP_001040000.1| RNA-binding protein with multiple splicing [Bos taurus]
gi|86438185|gb|AAI12765.1| RNA binding protein with multiple splicing [Bos taurus]
Length = 219
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|297824861|ref|XP_002880313.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
gi|297326152|gb|EFH56572.1| hypothetical protein ARALYDRAFT_483938 [Arabidopsis lyrata subsp.
lyrata]
Length = 249
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
G+ E P PP+ + LFV+ LP + + + +F + G+KEVR+V + PG
Sbjct: 162 GVKPNLPEAPAPPN--NILFVQNLPHETTPMVLQMLFYQYQGFKEVRMVEAK---PG--- 213
Query: 177 LILCFVDFVSPAHAATAMDALQG---QSNIICLS 207
+ FV+F + AM LQG Q N + ++
Sbjct: 214 --IAFVEFADEMQSTVAMQGLQGFKIQQNQMLIT 245
>gi|115469616|ref|NP_001058407.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|52077025|dbj|BAD46058.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113596447|dbj|BAF20321.1| Os06g0687500 [Oryza sativa Japonica Group]
gi|215692539|dbj|BAG87959.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 219
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
PLPP D TLF+ GLP D REV ++FR F GY VS R G F F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAYAFAVF 115
Query: 185 VSPAHAATAMDALQGQSNIICLSN 208
A AM A G+ I L N
Sbjct: 116 ADQPSALAAMSATNGR--IFDLEN 137
>gi|417397319|gb|JAA45693.1| Putative rna-binding protein with multiple splicing-like isoform 2
equus caballus [Desmodus rotundus]
Length = 219
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|403300512|ref|XP_003940978.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Saimiri
boliviensis boliviensis]
Length = 238
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 61 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 113
Query: 194 MDALQG 199
+AL G
Sbjct: 114 KNALNG 119
>gi|296472388|tpg|DAA14503.1| TPA: RNA-binding protein with multiple splicing [Bos taurus]
gi|440895026|gb|ELR47324.1| RNA-binding protein with multiple splicing [Bos grunniens mutus]
Length = 219
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|37748043|gb|AAH59527.1| Snrpb2 protein [Danio rerio]
Length = 229
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 152 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 201
Query: 188 AHAATAMDALQG 199
A A A DALQG
Sbjct: 202 AQAGVAKDALQG 213
>gi|344281670|ref|XP_003412601.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
2 [Loxodonta africana]
Length = 219
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|355692793|gb|EHH27396.1| RNA-binding protein with multiple splicing 2, partial [Macaca
mulatta]
Length = 181
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQG 199
+AL G
Sbjct: 57 KNALNG 62
>gi|332240824|ref|XP_003269587.1| PREDICTED: RNA-binding protein with multiple splicing [Nomascus
leucogenys]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
SE L + TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV
Sbjct: 14 SEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FV 66
Query: 183 DFVSPAHAATAMDALQG 199
F S + A A +AL G
Sbjct: 67 SFDSRSEAEAAKNALNG 83
>gi|348553686|ref|XP_003462657.1| PREDICTED: RNA-binding protein with multiple splicing-like isoform
1 [Cavia porcellus]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|195995899|ref|XP_002107818.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
gi|190588594|gb|EDV28616.1| hypothetical protein TRIADDRAFT_18899 [Trichoplax adhaerens]
Length = 204
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G + E+P + LF+ LP + + ++ +F F GYKEVRLV RH
Sbjct: 121 AGSQEELP-----NKILFLTNLPEETTELMLSMLFNQFPGYKEVRLVP--GRHD------ 167
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FV+F S AATA ++L G
Sbjct: 168 IAFVEFESEIQAATARNSLNG 188
>gi|57164973|ref|NP_001008712.1| RNA-binding protein with multiple splicing isoform C [Homo sapiens]
gi|332825789|ref|XP_001167950.2| PREDICTED: RNA-binding protein with multiple splicing [Pan
troglodytes]
gi|345781578|ref|XP_532815.3| PREDICTED: RNA-binding protein with multiple splicing [Canis lupus
familiaris]
gi|395739552|ref|XP_002819013.2| PREDICTED: RNA-binding protein with multiple splicing [Pongo
abelii]
gi|1669551|dbj|BAA12227.1| RBP-MS/type 3 [Homo sapiens]
gi|13177644|gb|AAH03608.1| RNA binding protein with multiple splicing [Homo sapiens]
gi|119583866|gb|EAW63462.1| hCG2043421, isoform CRA_d [Homo sapiens]
gi|261858762|dbj|BAI45903.1| RNA binding protein with multiple splicing [synthetic construct]
gi|383415405|gb|AFH30916.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|387541276|gb|AFJ71265.1| RNA-binding protein with multiple splicing isoform C [Macaca
mulatta]
gi|410212518|gb|JAA03478.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410212522|gb|JAA03480.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253368|gb|JAA14651.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410253372|gb|JAA14653.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294224|gb|JAA25712.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410294228|gb|JAA25714.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342391|gb|JAA40142.1| RNA binding protein with multiple splicing [Pan troglodytes]
gi|410342395|gb|JAA40144.1| RNA binding protein with multiple splicing [Pan troglodytes]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|390473655|ref|XP_002756964.2| PREDICTED: RNA-binding protein with multiple splicing [Callithrix
jacchus]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|403294314|ref|XP_003938139.1| PREDICTED: RNA-binding protein with multiple splicing [Saimiri
boliviensis boliviensis]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|126277363|ref|XP_001375205.1| PREDICTED: RNA-binding protein with multiple splicing 2-like
[Monodelphis domestica]
Length = 257
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S A A A
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRAGAEAA 86
Query: 194 MDALQG 199
+AL G
Sbjct: 87 KNALNG 92
>gi|62203475|gb|AAH92476.1| RNA binding protein with multiple splicing [Homo sapiens]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|371874989|ref|NP_001243119.1| U2 small nuclear ribonucleoprotein B'' [Danio rerio]
Length = 220
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 143 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 192
Query: 188 AHAATAMDALQG 199
A A A DALQG
Sbjct: 193 AQAGVAKDALQG 204
>gi|114657607|ref|XP_001174270.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Pan
troglodytes]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQG 199
+AL G
Sbjct: 85 KNALNG 90
>gi|34915990|ref|NP_919248.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|74762401|sp|Q6ZRY4.1|RBPS2_HUMAN RecName: Full=RNA-binding protein with multiple splicing 2
gi|34485858|gb|AAQ73311.1| RNA-binding protein with multiple splicing 2 [Homo sapiens]
gi|34534977|dbj|BAC87172.1| unnamed protein product [Homo sapiens]
gi|119598099|gb|EAW77693.1| RNA binding protein with multiple splicing 2 [Homo sapiens]
gi|225000786|gb|AAI72373.1| RNA binding protein with multiple splicing 2 [synthetic construct]
gi|261861060|dbj|BAI47052.1| RNA binding protein with multiple splicing 2 [synthetic construct]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQG 199
+AL G
Sbjct: 85 KNALNG 90
>gi|291386104|ref|XP_002709596.1| PREDICTED: RNA-binding protein with multiple splicing isoform 2
[Oryctolagus cuniculus]
Length = 219
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 25 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77
Query: 194 MDALQG 199
+AL G
Sbjct: 78 KNALNG 83
>gi|217072842|gb|ACJ84781.1| unknown [Medicago truncatula]
Length = 245
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F + G+KEVR+V + PG
Sbjct: 156 GGAKSLLPEAPAPPN--NILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAK---PG-- 208
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV++ + AM ALQG
Sbjct: 209 ---IAFVEYGDEMQSTMAMQALQG 229
>gi|116781538|gb|ABK22144.1| unknown [Picea sitchensis]
Length = 235
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 10/77 (12%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
E P PP+ + LF++ LP + + + +F+ + G+KEVR++ + PG + FV
Sbjct: 153 QEPPAPPN--NILFIQNLPHETTTMMLQMLFQQYPGFKEVRMIEAK---PG-----IAFV 202
Query: 183 DFVSPAHAATAMDALQG 199
++ A+ AM ALQG
Sbjct: 203 EYGDEMQASVAMQALQG 219
>gi|388497184|gb|AFK36658.1| unknown [Medicago truncatula]
Length = 232
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 13/84 (15%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F + G+KEVR+V + PG
Sbjct: 143 GGAKSLLPEAPAPPN--NILFIQNLPNETTPMMLQMLFLQYPGFKEVRMVEAK---PG-- 195
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV++ + AM ALQG
Sbjct: 196 ---IAFVEYGDEMQSTMAMQALQG 216
>gi|148703478|gb|EDL35425.1| RNA binding protein gene with multiple splicing, isoform CRA_b [Mus
musculus]
Length = 227
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 32 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 84
Query: 194 MDALQG 199
+AL G
Sbjct: 85 KNALNG 90
>gi|355778103|gb|EHH63139.1| RNA-binding protein with multiple splicing 2, partial [Macaca
fascicularis]
Length = 181
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 4 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 56
Query: 194 MDALQG 199
+AL G
Sbjct: 57 KNALNG 62
>gi|301619063|ref|XP_002938921.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 199
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQG 199
+AL G
Sbjct: 74 KNALNG 79
>gi|387540910|gb|AFJ71082.1| RNA-binding protein with multiple splicing 2 [Macaca mulatta]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 32 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 84
Query: 194 MDALQG 199
+AL G
Sbjct: 85 KNALNG 90
>gi|326918450|ref|XP_003205501.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Meleagris gallopavo]
Length = 233
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 62 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 114
Query: 194 MDALQG 199
+AL G
Sbjct: 115 KNALNG 120
>gi|345314045|ref|XP_001507449.2| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Ornithorhynchus anatinus]
Length = 123
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 3 TLFVSGLPMDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 55
Query: 194 MDALQG 199
+AL G
Sbjct: 56 KNALNG 61
>gi|148703479|gb|EDL35426.1| RNA binding protein gene with multiple splicing, isoform CRA_c [Mus
musculus]
Length = 198
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 55
Query: 194 MDALQG 199
+AL G
Sbjct: 56 KNALNG 61
>gi|395822321|ref|XP_003784468.1| PREDICTED: RNA-binding protein with multiple splicing 2 [Otolemur
garnettii]
Length = 211
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 34 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 86
Query: 194 MDALQG 199
+AL G
Sbjct: 87 KNALNG 92
>gi|156548050|ref|XP_001606482.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Nasonia vitripennis]
gi|345485456|ref|XP_003425274.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Nasonia vitripennis]
Length = 230
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G + VP P + LF+ LP + S ++ +F F G+KEVRLV +RH
Sbjct: 143 GMANAAVPEQP-PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------ 193
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FV+F + + A DALQG
Sbjct: 194 IAFVEFENEVQSGAAKDALQG 214
>gi|119583862|gb|EAW63458.1| hCG2043421, isoform CRA_a [Homo sapiens]
Length = 200
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 6 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 58
Query: 194 MDALQG 199
+AL G
Sbjct: 59 KNALNG 64
>gi|50539886|ref|NP_001002409.1| RNA binding protein with multiple splicing 2 [Danio rerio]
gi|166158150|ref|NP_001107477.1| uncharacterized protein LOC100135328 [Xenopus (Silurana)
tropicalis]
gi|49902931|gb|AAH76171.1| Zgc:92689 [Danio rerio]
gi|156230446|gb|AAI52179.1| Zgc:92689 [Danio rerio]
gi|163915769|gb|AAI57627.1| LOC100135328 protein [Xenopus (Silurana) tropicalis]
Length = 199
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 194 MDALQG 199
+AL G
Sbjct: 74 KNALNG 79
>gi|406607411|emb|CCH41202.1| Multiple RNA-binding domain-containing protein 1 [Wickerhamomyces
ciferrii]
Length = 861
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
SS + V+ LP + SR++V +F F K VR+ K + G FV+F+ P A
Sbjct: 734 SSKIIVKNLPFEASRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLIPKEAQ 789
Query: 192 TAMDALQG 199
+AMD LQG
Sbjct: 790 SAMDQLQG 797
>gi|449469074|ref|XP_004152246.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cucumis sativus]
Length = 248
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 83 RHMSGGMPSRPVDDPRIVGIGGMDP------GPSAKDRALGLGGGRS-EVPLPPDASSTL 135
RH G + D G+G ++P G +A + GG E P PP+ S L
Sbjct: 120 RHEEKGRKKKEQHDANQAGMG-LNPAFAGAYGATAHSQVPYSGGVMVPEAPAPPN--SIL 176
Query: 136 FVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMD 195
FV+ LP + + + +F + G+KEVR+V + PG + FV++ + AM
Sbjct: 177 FVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVEYSDEVQSTVAMQ 228
Query: 196 ALQG 199
ALQG
Sbjct: 229 ALQG 232
>gi|281347421|gb|EFB23005.1| hypothetical protein PANDA_009679 [Ailuropoda melanoleuca]
gi|351701272|gb|EHB04191.1| RNA-binding protein with multiple splicing, partial [Heterocephalus
glaber]
gi|355697845|gb|EHH28393.1| hypothetical protein EGK_18822, partial [Macaca mulatta]
gi|355779616|gb|EHH64092.1| hypothetical protein EGM_17218, partial [Macaca fascicularis]
Length = 198
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 56
Query: 194 MDALQG 199
+AL G
Sbjct: 57 KNALNG 62
>gi|426256354|ref|XP_004021805.1| PREDICTED: RNA-binding protein with multiple splicing [Ovis aries]
Length = 198
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 56
Query: 194 MDALQG 199
+AL G
Sbjct: 57 KNALNG 62
>gi|348526652|ref|XP_003450833.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Oreochromis niloticus]
Length = 199
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 21 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 73
Query: 194 MDALQG 199
+AL G
Sbjct: 74 KNALNG 79
>gi|356541768|ref|XP_003539345.1| PREDICTED: uncharacterized protein LOC100780983 [Glycine max]
Length = 338
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++FR F GY+ L R P F F S A A
Sbjct: 80 TLFVAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSNSSQPFAFAVFASQKSAILA 134
Query: 194 MDALQG 199
M AL G
Sbjct: 135 MHALNG 140
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 17/177 (9%)
Query: 30 YDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSG-G 88
+D+ G L + + R R D + +GA + S+ G + HM G G
Sbjct: 143 FDLEKGSTLYIDLAKSNSRSK-RTRIDDERVGADKKARGLTPSWSTPDSGVGSIHMPGMG 201
Query: 89 MPSRPVDD---PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASS---TLFVEGLPS 142
P+ + P +G D SA +L +S P P S+ TLFV L
Sbjct: 202 NPAFNTNTFGYPSAQSLGNADG--SAMSDSLFANLKKSSTPYIPQNSTPCATLFVANLGP 259
Query: 143 DCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
C+ +E+ +F + G+ ++++ S G P+ FVDF + A+++LQG
Sbjct: 260 SCNEQELIQVFSRYPGFLKLKMQSTY-----GAPV--AFVDFQDVGSSTDALNSLQG 309
>gi|410912397|ref|XP_003969676.1| PREDICTED: RNA-binding protein with multiple splicing-like
[Takifugu rubripes]
Length = 259
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 91 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 143
Query: 194 MDALQG 199
+AL G
Sbjct: 144 KNALNG 149
>gi|148222884|ref|NP_001087735.1| RNA binding protein with multiple splicing 2 [Xenopus laevis]
gi|51703926|gb|AAH81153.1| MGC84222 protein [Xenopus laevis]
Length = 197
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQG 199
+AL G
Sbjct: 74 KNALNG 79
>gi|242036017|ref|XP_002465403.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
gi|241919257|gb|EER92401.1| hypothetical protein SORBIDRAFT_01g038060 [Sorghum bicolor]
Length = 233
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 10/82 (12%)
Query: 118 LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
LG E P PP+ + LF++ LP + + +F+ + G++EVR++ + PG
Sbjct: 146 LGKVSQEPPAPPN--NILFIQNLPDQTTSMMLQILFQQYPGFREVRMIEAK---PG---- 196
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + + AM ALQG
Sbjct: 197 -IAFVEFEDDSQSMVAMQALQG 217
>gi|327285368|ref|XP_003227406.1| PREDICTED: RNA-binding protein with multiple splicing-like, partial
[Anolis carolinensis]
Length = 194
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 3 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 55
Query: 194 MDALQG 199
+AL G
Sbjct: 56 KNALNG 61
>gi|301619061|ref|XP_002938920.1| PREDICTED: hypothetical protein LOC100038109 [Xenopus (Silurana)
tropicalis]
Length = 198
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQG 199
+AL G
Sbjct: 74 KNALNG 79
>gi|322797045|gb|EFZ19352.1| hypothetical protein SINV_13322 [Solenopsis invicta]
Length = 152
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 25/131 (19%)
Query: 85 MSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLG------GGRSEVPLPPDASST---- 134
M G RP R++ + + AK RA G + VP P +T
Sbjct: 15 MKGTFAERPKKPKRVIPVAD-EEAKRAKKRAKEQAKHSQQIGYHASVPQHPGLVNTAVPE 73
Query: 135 ------LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 74 QPPNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENEV 125
Query: 189 HAATAMDALQG 199
+ A DALQG
Sbjct: 126 QSGAAKDALQG 136
>gi|297834202|ref|XP_002884983.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
gi|297330823|gb|EFH61242.1| hypothetical protein ARALYDRAFT_478769 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P A +TLFV GLP+D RE+ ++FR G++ +L ++ G ++ F F S
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRYGFESCQL-----KYTGRGDQVVAFATFTSHR 87
Query: 189 HAATAMDALQG 199
A AM+ L G
Sbjct: 88 FAMAAMNELNG 98
>gi|395507829|ref|XP_003758221.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Sarcophilus
harrisii]
Length = 225
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG +A + A G + P PD + LF+ LP + + ++ +F F G+KEVRL
Sbjct: 124 PGQAAPNSA-NTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
V RH + FV+F + A A DALQG
Sbjct: 183 VP--GRHD------IAFVEFENDGQAGAARDALQG 209
>gi|332235691|ref|XP_003267039.1| PREDICTED: RNA-binding protein with multiple splicing 2, partial
[Nomascus leucogenys]
Length = 214
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ +R P G FV F S A A A
Sbjct: 37 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 89
Query: 194 MDALQG 199
+AL G
Sbjct: 90 KNALNG 95
>gi|449484269|ref|XP_004156835.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cucumis
sativus]
Length = 242
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 83 RHMSGGMPSRPVDDPRIVGIGGMDP------GPSAKDRALGLGGGRS-EVPLPPDASSTL 135
RH G + D G+G ++P G +A + GG E P PP+ S L
Sbjct: 114 RHEEKGRKKKEQHDANQAGMG-LNPAFAGAYGATAHSQVPYSGGVMVPEAPAPPN--SIL 170
Query: 136 FVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMD 195
FV+ LP + + + +F + G+KEVR+V + PG + FV++ + AM
Sbjct: 171 FVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVEYSDEVQSTVAMQ 222
Query: 196 ALQG 199
ALQG
Sbjct: 223 ALQG 226
>gi|317106697|dbj|BAJ53198.1| JHL03K20.7 [Jatropha curcas]
Length = 316
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P D TLFV GLP D RE+ ++FR F GY+ L R P F F+
Sbjct: 71 PHDPVRTLFVAGLPDDVKPREIYNLFREFPGYESSHL-----RSPTQTSQPFAFATFIDQ 125
Query: 188 AHAATAMDALQG 199
A AM AL G
Sbjct: 126 PSAVAAMHALNG 137
>gi|148223487|ref|NP_001081864.1| RNA-binding protein with multiple splicing [Xenopus laevis]
gi|13124486|sp|Q9YGP5.1|RBPMS_XENLA RecName: Full=RNA-binding protein with multiple splicing;
Short=RBP-MS; AltName: Full=Heart and RRM expressed
sequence; Short=Hermes
gi|4324639|gb|AAD16971.1| RRM-type RNA-binding protein hermes [Xenopus laevis]
gi|66912013|gb|AAH97507.1| LOC398092 protein [Xenopus laevis]
Length = 196
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A A
Sbjct: 21 TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73
Query: 194 MDALQG 199
+AL G
Sbjct: 74 KNALNG 79
>gi|432851215|ref|XP_004066912.1| PREDICTED: RNA-binding protein with multiple splicing-like [Oryzias
latipes]
Length = 264
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 86 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDSRSGAEAA 138
Query: 194 MDALQG 199
+AL G
Sbjct: 139 KNALNG 144
>gi|428171290|gb|EKX40208.1| hypothetical protein GUITHDRAFT_75811, partial [Guillardia theta
CCMP2712]
Length = 209
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 8/64 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+E LP D + +VA +F PF G+KEVRLV PG + FV++ S + AM
Sbjct: 152 LFLENLPLDITSDDVAAVFSPFPGFKEVRLVPS---RPG-----IAFVEYESDVQSGMAM 203
Query: 195 DALQ 198
LQ
Sbjct: 204 ARLQ 207
>gi|15226631|ref|NP_182280.1| spliceosomal protein U1A [Arabidopsis thaliana]
gi|75319458|sp|Q39244.1|RU1A_ARATH RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|1050430|emb|CAA90283.1| U1snRNP-specific protein [Arabidopsis thaliana]
gi|2529669|gb|AAC62852.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|15450591|gb|AAK96567.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|16649011|gb|AAL24357.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|20259986|gb|AAM13340.1| small nuclear ribonucleoprotein U1A [Arabidopsis thaliana]
gi|22655484|gb|AAM98334.1| At2g47580/T30B22.12 [Arabidopsis thaliana]
gi|330255767|gb|AEC10861.1| spliceosomal protein U1A [Arabidopsis thaliana]
Length = 250
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
G+ E P PP+ + LFV+ LP + + + +F + G+KEVR++ + PG
Sbjct: 163 GMKPNMPEAPAPPN--NILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAK---PG--- 214
Query: 177 LILCFVDFVSPAHAATAMDALQG---QSNIICLS 207
+ FV+F + AM LQG Q N + ++
Sbjct: 215 --IAFVEFADEMQSTVAMQGLQGFKIQQNQMLIT 246
>gi|312372120|gb|EFR20150.1| hypothetical protein AND_20571 [Anopheles darlingi]
Length = 216
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 85 MSGGMPSRP--VDDPRIVGIGGMDPGPSAKDRALGLGGGRSE---VPLPPDASSTLFVEG 139
+ G RP V P+ V + S K +A G G + PP+ LF+
Sbjct: 94 LKGTFQERPKRVRQPKPVPT---EEKKSKKQKAAGEVGATNNSATAEQPPN--QILFLTN 148
Query: 140 LPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
LP + + ++ +F F G+KEVRLV +RH + FV+F S + A +ALQG
Sbjct: 149 LPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFASEVQSGAAREALQG 200
>gi|326669776|ref|XP_003199078.1| PREDICTED: RNA-binding protein with multiple splicing-like [Danio
rerio]
Length = 183
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 22 TLFVSGLPMDIKPRELYLLFRPFQGY-EGSLIKFTSKQPVG------FVSFSSRSEAEAA 74
Query: 194 MDALQG 199
+ L G
Sbjct: 75 KNRLNG 80
>gi|149640848|ref|XP_001514376.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Ornithorhynchus anatinus]
gi|345329106|ref|XP_003431335.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Ornithorhynchus anatinus]
Length = 225
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G ++ P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNAAQNPQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|449280001|gb|EMC87413.1| U2 small nuclear ribonucleoprotein B'' [Columba livia]
Length = 226
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 14/99 (14%)
Query: 102 IGGMDPGPSAKDRALGLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
I G P ++ A G +VP PP+ LF+ LP + + ++ +F F G+K
Sbjct: 125 IQGATPNSAS---APGTAAQNQQVPDNPPN--YILFLNNLPEETNEMMLSMLFNQFPGFK 179
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
EVRLV RH + FV+F + A A DALQG
Sbjct: 180 EVRLVP--GRHD------IAFVEFENENQAGAARDALQG 210
>gi|410909846|ref|XP_003968401.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Takifugu rubripes]
Length = 273
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 196 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 245
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG QSN + +S
Sbjct: 246 VQAGAARDALQGFKITQSNAMKIS 269
>gi|395529330|ref|XP_003766769.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Sarcophilus
harrisii]
Length = 241
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 104 GMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVR 163
GM P A L G SE P + LF+ LP + + ++ +F F G+KEVR
Sbjct: 142 GMPPMTQAPRIMHHLPGXLSENP----PNHILFLTNLPEETNELMLSMLFNQFPGFKEVR 197
Query: 164 LVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG----QSNIICLS 207
LV RH + FV+F + A A DALQG Q+N + +S
Sbjct: 198 LVP--GRHD------IAFVEFDNEVQAGAARDALQGFKITQNNAMKIS 237
>gi|302832471|ref|XP_002947800.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
gi|300267148|gb|EFJ51333.1| hypothetical protein VOLCADRAFT_103581 [Volvox carteri f.
nagariensis]
Length = 224
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LFV+ LP + + + +F+ F G++EVR+V E+R PG + FV+F + +
Sbjct: 149 NKILFVQNLPENSNEAMLGMLFQQFPGFREVRMV--EAR-PG-----IAFVEFENDMQST 200
Query: 192 TAMDALQG 199
TAM LQG
Sbjct: 201 TAMQGLQG 208
>gi|195456672|ref|XP_002075236.1| GK16926 [Drosophila willistoni]
gi|194171321|gb|EDW86222.1| GK16926 [Drosophila willistoni]
Length = 806
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ +FV+ LPSDC++ ++ IF+PF K+VRLV K ++ G + ++++ P+ A
Sbjct: 628 TNKIFVKNLPSDCTKEQLTGIFKPFGTIKDVRLVFKFNKQFKG----IAYIEYELPSEAQ 683
Query: 192 TAMDALQGQS 201
A+ G S
Sbjct: 684 KAVTQRDGFS 693
>gi|156402885|ref|XP_001639820.1| predicted protein [Nematostella vectensis]
gi|156226951|gb|EDO47757.1| predicted protein [Nematostella vectensis]
Length = 209
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LF+ LP + + ++ +F F G+KEVRLV S + FV+F + A
Sbjct: 134 NNILFLTNLPMETTELMLSMLFNQFPGFKEVRLVPGRSD--------ISFVEFENEVQAG 185
Query: 192 TAMDALQG 199
TA DALQG
Sbjct: 186 TAKDALQG 193
>gi|357621621|gb|EHJ73396.1| U1 small nuclear ribonucleoprotein A [Danaus plexippus]
Length = 220
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 143 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFANE 192
Query: 188 AHAATAMDALQG 199
+A A +ALQG
Sbjct: 193 MQSAAAKEALQG 204
>gi|222636114|gb|EEE66246.1| hypothetical protein OsJ_22424 [Oryza sativa Japonica Group]
Length = 283
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
PLPP D TLF+ GLP D REV ++FR F GY VS R G F F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAYAFAVF 115
Query: 185 VSPAHAATAMDALQGQSNIICLSN 208
A AM A G+ I L N
Sbjct: 116 ADQPSALAAMSATNGR--IFDLEN 137
>gi|449512082|ref|XP_002199484.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 221
Score = 46.6 bits (109), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 122 RSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
+++VP PPD LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 137 QNQVPDNPPD--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 186
Query: 181 FVDFVSPAHAATAMDALQG 199
FV+F + A A DALQG
Sbjct: 187 FVEFENENQAGAARDALQG 205
>gi|348683636|gb|EGZ23451.1| hypothetical protein PHYSODRAFT_484798 [Phytophthora sojae]
Length = 236
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+E LP C++ ++ +F+ + G+KEVR+V PG L FV+F A AA
Sbjct: 161 NKILFLEALPESCNKEMLSVLFKQYQGFKEVRMV------PGKKG--LAFVEFGDEAQAA 212
Query: 192 TAMDALQG 199
A+ L G
Sbjct: 213 IALQGLFG 220
>gi|330842469|ref|XP_003293200.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
gi|325076492|gb|EGC30273.1| hypothetical protein DICPUDRAFT_83777 [Dictyostelium purpureum]
Length = 233
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ TLFVE LP C + +F F GYKEV +V ES+ + FV+F
Sbjct: 155 LPPN--KTLFVENLPDKCDPMMLEMLFSQFPGYKEVHMV--ESKKG------IAFVEFQD 204
Query: 187 PAHAATAMDALQ 198
+ + AM +LQ
Sbjct: 205 ESKSGLAMQSLQ 216
>gi|307195443|gb|EFN77329.1| U2 small nuclear ribonucleoprotein B'' [Harpegnathos saltator]
Length = 231
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 27/132 (20%)
Query: 85 MSGGMPSRPVDDPRIVGIGGMDPGPSAKDRA---------LGLGGG--------RSEVPL 127
M G RP R+V + AK RA +G G + VP
Sbjct: 94 MKGTFAERPKKPKRVVPAAD-EEAKRAKKRAKEQAKHSQQIGYHAGVPQHPGLVNTAVPE 152
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P + LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 153 QP-PNQILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 203
Query: 188 AHAATAMDALQG 199
+ A DALQG
Sbjct: 204 VQSGAAKDALQG 215
>gi|223649102|gb|ACN11309.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 47/95 (49%), Gaps = 16/95 (16%)
Query: 111 AKDRALGLGGGRS-----EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
AK ALG + +VP PP+ LF+ LP + + ++ +F F G+KEVRL
Sbjct: 119 AKKPALGSANTNNAPTTMQVPDNPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 176
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
V PG + FV+F S A A DALQG
Sbjct: 177 V------PGKHD--ISFVEFESEGQAGVAKDALQG 203
>gi|218198782|gb|EEC81209.1| hypothetical protein OsI_24241 [Oryza sativa Indica Group]
Length = 283
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 38/84 (45%), Gaps = 8/84 (9%)
Query: 126 PLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
PLPP D TLF+ GLP D REV ++FR F GY VS R G F F
Sbjct: 61 PLPPRDELRTLFIAGLPGDAKAREVYNLFRDFPGY-----VSSHLRTSGKSSQAYAFAVF 115
Query: 185 VSPAHAATAMDALQGQSNIICLSN 208
A AM A G+ I L N
Sbjct: 116 ADQPSALAAMSATNGR--IFDLEN 137
>gi|380024353|ref|XP_003695965.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Apis
florea]
Length = 231
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 29/133 (21%)
Query: 85 MSGGMPSRPVDDPRIVGIGGMDPGPSAKDRA---------LGLGGGRSEVP--------- 126
M G RP R+V + AK RA +G G + P
Sbjct: 94 MKGTYAERPKKPKRVVPAAD-EEAKRAKKRAKEQAKHSQQIGYHTGVQQHPGLVNTAVPE 152
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 153 QPPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFEN 202
Query: 187 PAHAATAMDALQG 199
+ A DALQG
Sbjct: 203 EVQSGAAKDALQG 215
>gi|260794824|ref|XP_002592407.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
gi|229277626|gb|EEN48418.1| hypothetical protein BRAFLDRAFT_118420 [Branchiostoma floridae]
Length = 1558
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D+ TLFV GLP D RE+ +FR + GY E L+ ++ P G FV F S A
Sbjct: 13 DSVRTLFVSGLPMDAKPRELYLLFRAYKGY-EGSLLKVTTKQPVG------FVTFESRAG 65
Query: 190 AATAMDALQG 199
A A ALQG
Sbjct: 66 AEAAKQALQG 75
>gi|149057907|gb|EDM09150.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057912|gb|EDM09155.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
gi|149057917|gb|EDM09160.1| similar to RNA binding protein gene with multiple splicing
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 90
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F S + A A
Sbjct: 8 TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 60
Query: 194 MDALQGQSNII 204
+AL S +
Sbjct: 61 KNALNMSSQYL 71
>gi|226443332|ref|NP_001139849.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
gi|221219334|gb|ACM08328.1| U2 small nuclear ribonucleoprotein B [Salmo salar]
Length = 219
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 142 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESE 191
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 192 GQAGVAKDALQG 203
>gi|303388669|ref|XP_003072568.1| U1 small nuclear ribonucleoprotein A [Encephalitozoon intestinalis
ATCC 50506]
gi|303301709|gb|ADM11208.1| U1 small nuclear ribonucleoprotein A [Encephalitozoon intestinalis
ATCC 50506]
Length = 173
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 9/63 (14%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
++ +L V G+PS +R E+ IF+ F G + VRL+ +S L FVDF SP A
Sbjct: 98 STRSLLVTGIPSGMTREELVDIFKGFEGLEAVRLIKVKS---------LAFVDFSSPQEA 148
Query: 191 ATA 193
+TA
Sbjct: 149 STA 151
>gi|270047496|ref|NP_001161808.1| U1 small nuclear ribonucleoprotein A [Apis mellifera]
Length = 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 56/133 (42%), Gaps = 29/133 (21%)
Query: 85 MSGGMPSRPVDDPRIVGIGGMDPGPSAKDRA---------LGLGGGRSEVP--------- 126
M G RP R+V + AK RA +G G + P
Sbjct: 94 MKGTYAERPKKPKRVVPAAD-EEAKRAKKRAKEQAKHSQQIGYHTGVQQHPGLVNTAVPE 152
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 153 QPPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFEN 202
Query: 187 PAHAATAMDALQG 199
+ A DALQG
Sbjct: 203 EVQSGAAKDALQG 215
>gi|432953883|ref|XP_004085463.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 1
[Oryzias latipes]
Length = 217
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 140 PPN--HILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFESD 189
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 190 TQAGVAKDALQG 201
>gi|357112644|ref|XP_003558118.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like
[Brachypodium distachyon]
Length = 233
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 104 GMDPGPSAKD--------RALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRP 155
PGP+A +A G E P PP+ LF++ LP + + +FR
Sbjct: 124 AQQPGPNAPVAPSNVTGYQASRFGKAPQEPPAPPN--KILFIQNLPDQTTSMMLQLLFRQ 181
Query: 156 FVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ G+ EVR++ + PG + FV+F + + AM ALQG
Sbjct: 182 YPGFWEVRMIEAK---PG-----IAFVEFEDESQSMVAMQALQG 217
>gi|383847977|ref|XP_003699629.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Megachile
rotundata]
Length = 231
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 154 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 203
Query: 188 AHAATAMDALQG 199
+ A DALQG
Sbjct: 204 VQSGAAKDALQG 215
>gi|340726396|ref|XP_003401545.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Bombus
terrestris]
gi|350423999|ref|XP_003493658.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Bombus
impatiens]
Length = 233
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 156 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 205
Query: 188 AHAATAMDALQG 199
+ A DALQG
Sbjct: 206 VQSGAAKDALQG 217
>gi|403221977|dbj|BAM40109.1| U1/2 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 206
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 9/70 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ S TLFVE +PSD S+ + +FR + G+K R + E R+ + FVD+
Sbjct: 131 EESHTLFVENIPSDMSKDSLELLFRQYPGFKNCRFI--EGRY-------VAFVDYSMATQ 181
Query: 190 AATAMDALQG 199
A A++ LQG
Sbjct: 182 AEIALEGLQG 191
>gi|213513247|ref|NP_001133590.1| RNA-binding protein with multiple splicing [Salmo salar]
gi|209154600|gb|ACI33532.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 201
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A
Sbjct: 23 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 75
Query: 194 MDALQG 199
+AL G
Sbjct: 76 KNALNG 81
>gi|417397429|gb|JAA45748.1| Putative spliceosomal protein snrnp-u1a/u2b [Desmodus rotundus]
Length = 225
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG A + A G + P PD + LF+ LP + + ++ +F F G+KEVRL
Sbjct: 124 PGQGAPNSA-NTQGNATPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
V RH + FV+F + A A DALQG
Sbjct: 183 VP--GRHD------IAFVEFENDGQAGAARDALQG 209
>gi|223648622|gb|ACN11069.1| RNA-binding protein with multiple splicing [Salmo salar]
Length = 200
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 74
Query: 194 MDALQG 199
+AL G
Sbjct: 75 KNALNG 80
>gi|327260920|ref|XP_003215280.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Anolis
carolinensis]
Length = 224
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 147 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 196
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 197 GQAGAARDALQG 208
>gi|307110924|gb|EFN59159.1| hypothetical protein CHLNCDRAFT_50008 [Chlorella variabilis]
Length = 236
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFVE LP + V +F+ F G+KEVR+V + PG + FV++ A AM
Sbjct: 163 LFVENLPGTANEAMVGMLFQQFTGFKEVRMVPAK---PG-----IAFVEYSDEGQAGVAM 214
Query: 195 DALQG 199
LQG
Sbjct: 215 QGLQG 219
>gi|47225009|emb|CAF97424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 272
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 195 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 244
Query: 188 AHAATAMDALQG----QSNIICLS 207
AA A +ALQG Q+N + +S
Sbjct: 245 VQAAAAREALQGFKITQTNAMKIS 268
>gi|348534739|ref|XP_003454859.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Oreochromis
niloticus]
Length = 282
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQTNAMKIS 278
>gi|296082378|emb|CBI21383.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ L R P + F F+
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQS 129
Query: 190 AATAMDALQG 199
A AM AL G
Sbjct: 130 AIAAMHALNG 139
>gi|225438787|ref|XP_002283118.1| PREDICTED: uncharacterized protein LOC100247532 [Vitis vinifera]
Length = 336
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ L R P + F F+
Sbjct: 78 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQS 132
Query: 190 AATAMDALQG 199
A AM AL G
Sbjct: 133 AIAAMHALNG 142
>gi|432953888|ref|XP_004085464.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Oryzias latipes]
Length = 218
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 141 PPN--HILFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFESD 190
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 191 TQAGVAKDALQG 202
>gi|410909848|ref|XP_003968402.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Takifugu rubripes]
Length = 279
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 202 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 251
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG QSN + +S
Sbjct: 252 VQAGAARDALQGFKITQSNAMKIS 275
>gi|118485733|gb|ABK94716.1| unknown [Populus trichocarpa]
Length = 254
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V + PG
Sbjct: 165 GGVKSMVPEAPAPPN--NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAK---PG-- 217
Query: 176 PLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
+ FV++ + AM LQG I+ +++++ Y
Sbjct: 218 ---IAFVEYGDEMQSTGAMHGLQG-FKILQQNSMLITY 251
>gi|90077244|dbj|BAE88302.1| unnamed protein product [Macaca fascicularis]
Length = 197
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
E P P + LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 116 QETPAP---NHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 164
Query: 183 DFVSPAHAATAMDALQG----QSNIICLS 207
+F + A A DALQG Q+N + +S
Sbjct: 165 EFDNEVQAGAARDALQGFKITQNNAMKIS 193
>gi|351695324|gb|EHA98242.1| U2 small nuclear ribonucleoprotein B'' [Heterocephalus glaber]
Length = 224
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 135 GNATTNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 187
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 188 -IAFVEFENDGQAGAARDALQG 208
>gi|392883960|gb|AFM90812.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 109 PSAKDRALGLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
P+ + +VP PP+ LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 129 PTTANSNQTTSSANQQVPDNPPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP- 185
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
RH + FV+F + A A DALQG
Sbjct: 186 -GRHD------IAFVEFENEGQAGAARDALQG 210
>gi|294461275|gb|ADE76200.1| unknown [Picea sitchensis]
gi|294464400|gb|ADE77712.1| unknown [Picea sitchensis]
Length = 241
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 124 EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
E P PP+ + LFV+ LP + + + +F + G+KEVR++ + PG + FV+
Sbjct: 160 EAPAPPN--NILFVQNLPHETTSMMLQMLFCQYHGFKEVRMIEAK---PG-----IAFVE 209
Query: 184 FVSPAHAATAMDALQG 199
+ + AM ALQG
Sbjct: 210 YADEMQSTVAMQALQG 225
>gi|348538124|ref|XP_003456542.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Oreochromis
niloticus]
Length = 218
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 141 PPN--YILFLSNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFESD 190
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 191 TQAGVAKDALQG 202
>gi|318065773|ref|NP_001187499.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
gi|308322301|gb|ADO28288.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus furcatus]
gi|308323171|gb|ADO28722.1| u2 small nuclear ribonucleoprotein b'' [Ictalurus punctatus]
Length = 219
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F
Sbjct: 142 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--IAFVEFEGE 191
Query: 188 AHAATAMDALQG 199
A A A DALQG
Sbjct: 192 AQAGVAKDALQG 203
>gi|428182625|gb|EKX51485.1| hypothetical protein GUITHDRAFT_159319 [Guillardia theta CCMP2712]
Length = 237
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+E LP + + + +F+ F G EVR+V PG + FV+F S A AA
Sbjct: 161 NKILFLERLPDEINVEMLQTLFKQFPGLAEVRMV------PGKTGI--AFVEFESDAQAA 212
Query: 192 TAMDALQG 199
TA D LQG
Sbjct: 213 TARDTLQG 220
>gi|355784710|gb|EHH65561.1| U2 small nuclear ribonucleoprotein B'' [Macaca fascicularis]
Length = 225
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNTTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|386781069|ref|NP_001247823.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|402883260|ref|XP_003905142.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Papio
anubis]
gi|402883262|ref|XP_003905143.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Papio
anubis]
gi|402883264|ref|XP_003905144.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 3 [Papio
anubis]
gi|355563375|gb|EHH19937.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|380787253|gb|AFE65502.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|383414075|gb|AFH30251.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
gi|384942630|gb|AFI34920.1| U2 small nuclear ribonucleoprotein B'' [Macaca mulatta]
Length = 225
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNTTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|224128458|ref|XP_002320337.1| predicted protein [Populus trichocarpa]
gi|222861110|gb|EEE98652.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 14/98 (14%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP++ + + +F+ + G+KEVR+V + PG
Sbjct: 142 GGVKSMVPEAPAPPN--NILFIQNLPNETTPMMLQMLFQQYPGFKEVRMVEAK---PG-- 194
Query: 176 PLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
+ FV++ + AM LQG I+ +++++ Y
Sbjct: 195 ---IAFVEYGDEMQSTGAMHGLQG-FKILQQNSMLITY 228
>gi|23956110|ref|NP_067310.1| U2 small nuclear ribonucleoprotein B'' [Mus musculus]
gi|52783420|sp|Q9CQI7.1|RU2B_MOUSE RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|12847289|dbj|BAB27510.1| unnamed protein product [Mus musculus]
gi|12851400|dbj|BAB29026.1| unnamed protein product [Mus musculus]
gi|20072417|gb|AAH26794.1| U2 small nuclear ribonucleoprotein B [Mus musculus]
gi|126035620|gb|ABN72533.1| U2 small nuclear ribonucleoprotein B [Mus spretus]
gi|148696479|gb|EDL28426.1| mCG19497, isoform CRA_c [Mus musculus]
Length = 225
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 188
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 ---IAFVEFENDGQAGAARDALQG 209
>gi|387914214|gb|AFK10716.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392878676|gb|AFM88170.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884228|gb|AFM90946.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884422|gb|AFM91043.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
gi|392884424|gb|AFM91044.1| u2 small nuclear ribonucleoprotein B-like protein [Callorhinchus
milii]
Length = 226
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 109 PSAKDRALGLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
P+ + +VP PP+ LF+ LP + + ++ +F F G+KEVRLV
Sbjct: 129 PTTANSNQTTSSANQQVPDNPPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP- 185
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
RH + FV+F + A A DALQG
Sbjct: 186 -GRHD------IAFVEFENEGQAGAARDALQG 210
>gi|449495575|ref|XP_004176204.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 225
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 122 RSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
+++VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 141 QNQVPDNPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 190
Query: 181 FVDFVSPAHAATAMDALQG 199
FV+F + A A DALQG
Sbjct: 191 FVEFENENQAGAARDALQG 209
>gi|123994687|gb|ABM84945.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|261861662|dbj|BAI47353.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
Length = 225
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|90086371|dbj|BAE91738.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 45.4 bits (106), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 75 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENDGQAGAAR 126
Query: 195 DALQG 199
DALQG
Sbjct: 127 DALQG 131
>gi|332022263|gb|EGI62578.1| U2 small nuclear ribonucleoprotein B'' [Acromyrmex echinatior]
Length = 184
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 107 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 156
Query: 188 AHAATAMDALQG 199
+ A DALQG
Sbjct: 157 VQSGAAKDALQG 168
>gi|301787297|ref|XP_002929064.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Ailuropoda
melanoleuca]
gi|410954385|ref|XP_003983845.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Felis
catus]
gi|410954387|ref|XP_003983846.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Felis
catus]
gi|281346668|gb|EFB22252.1| hypothetical protein PANDA_019153 [Ailuropoda melanoleuca]
Length = 225
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 115 ALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHP 172
A G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 131 AANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD 188
Query: 173 GGDPLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 ------IAFVEFENDGQAGAARDALQG 209
>gi|186510039|ref|NP_001118622.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|26449895|dbj|BAC42069.1| unknown protein [Arabidopsis thaliana]
gi|332641880|gb|AEE75401.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 287
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P A +TLFV GLP+D RE+ ++FR G++ +L ++ G ++ F F S
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQL-----KYTGRGDQVVAFATFTSHR 87
Query: 189 HAATAMDALQG 199
A AM+ L G
Sbjct: 88 FALAAMNELNG 98
>gi|351722454|ref|NP_001235453.1| uncharacterized protein LOC100500002 [Glycine max]
gi|255628437|gb|ACU14563.1| unknown [Glycine max]
Length = 241
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 13/83 (15%)
Query: 119 GGGRS---EVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
GG +S E P PP+ + LF++ LP+D + + +F + G+KEVR+V + PG
Sbjct: 152 GGAKSMVPEAPAPPN--NILFIQNLPNDSTPMMLQMLFLQYPGFKEVRMVETK---PG-- 204
Query: 176 PLILCFVDFVSPAHAATAMDALQ 198
+ FV++ + AM LQ
Sbjct: 205 ---IAFVEYGDEMQSTVAMQTLQ 224
>gi|403263452|ref|XP_003924046.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Saimiri
boliviensis boliviensis]
gi|197692169|dbj|BAG70048.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|197692419|dbj|BAG70173.1| small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
Length = 225
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|354542538|ref|NP_001238897.1| U2 small nuclear ribonucleoprotein B'' [Canis lupus familiaris]
Length = 225
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 115 ALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHP 172
A G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 131 AANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD 188
Query: 173 GGDPLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 ------IAFVEFENDGQAGAARDALQG 209
>gi|4507123|ref|NP_003083.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|38149981|ref|NP_937863.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|332238115|ref|XP_003268248.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Nomascus leucogenys]
gi|332238117|ref|XP_003268249.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Nomascus leucogenys]
gi|397478615|ref|XP_003810638.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Pan
paniscus]
gi|397478617|ref|XP_003810639.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pan
paniscus]
gi|426391004|ref|XP_004061878.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1
[Gorilla gorilla gorilla]
gi|426391006|ref|XP_004061879.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2
[Gorilla gorilla gorilla]
gi|134095|sp|P08579.1|RU2B_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|340105|gb|AAA36796.1| U2 small nuclear ribonucleoprotein B'' [Homo sapiens]
gi|17390031|gb|AAH18022.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|22477822|gb|AAH36737.1| Small nuclear ribonucleoprotein polypeptide B'' [Homo sapiens]
gi|119630689|gb|EAX10284.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|119630690|gb|EAX10285.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_a
[Homo sapiens]
gi|123979922|gb|ABM81790.1| small nuclear ribonucleoprotein polypeptide B'' [synthetic
construct]
gi|189066590|dbj|BAG35840.1| unnamed protein product [Homo sapiens]
gi|410226668|gb|JAA10553.1| small nuclear ribonucleoprotein polypeptide B [Pan troglodytes]
gi|410226670|gb|JAA10554.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410263358|gb|JAA19645.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
gi|410342435|gb|JAA40164.1| small nuclear ribonucleoprotein polypeptide B'' [Pan troglodytes]
Length = 225
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|403283665|ref|XP_003933231.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Saimiri
boliviensis boliviensis]
Length = 225
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|195396809|ref|XP_002057021.1| GJ16850 [Drosophila virilis]
gi|194146788|gb|EDW62507.1| GJ16850 [Drosophila virilis]
Length = 216
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 133 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 182
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 183 VEFTTELQSNAAKEALQG 200
>gi|58394659|ref|XP_320869.2| AGAP011637-PA [Anopheles gambiae str. PEST]
gi|55235062|gb|EAA00418.2| AGAP011637-PA [Anopheles gambiae str. PEST]
Length = 216
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 85 MSGGMPSRP--VDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPS 142
+ G RP V P+ + +G + PP+ LF+ LP
Sbjct: 94 LKGTFQERPKRVKQPKPIQTEDKKAKKLKNAGEVGATNNSATAEQPPN--QILFLTNLPE 151
Query: 143 DCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ + ++ +F F G+KEVRLV +RH + FV+F + + A +ALQG
Sbjct: 152 ETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFATELQSGAAREALQG 200
>gi|344279401|ref|XP_003411476.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Loxodonta
africana]
Length = 225
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPSPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|351726226|ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
gi|255627621|gb|ACU14155.1| unknown [Glycine max]
Length = 232
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 14/92 (15%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP+A R G G E P ++ LF+E LP + + R + +F + G+KEV L+
Sbjct: 139 GPTASFRQ---GPGAQEAAAP---NNILFIENLPHETTGRMLEMLFEQYPGFKEVCLIEA 192
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ PG + FVDF ++ AM AL G
Sbjct: 193 K---PG-----IAFVDFEDEVQSSMAMQALHG 216
>gi|359718900|ref|NP_001240769.1| U2 small nuclear ribonucleoprotein B'' [Equus caballus]
gi|328908863|gb|AEB61099.1| u2 small nuclear ribonucleoprotein B''-like protein [Equus
caballus]
Length = 225
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 115 ALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHP 172
++ G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 131 SVNTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD 188
Query: 173 GGDPLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 ------IAFVEFENDGQAGAARDALQG 209
>gi|390337886|ref|XP_794412.3| PREDICTED: protein couch potato-like [Strongylocentrotus
purpuratus]
Length = 124
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K + PG + + FV F S A A A
Sbjct: 14 TLFVSGLPMDAKPRELYLLFRAYQGYEGSLL--KVTSKPGKNQSPVGFVTFESRAGAEAA 71
Query: 194 MDALQG 199
ALQG
Sbjct: 72 KQALQG 77
>gi|195134172|ref|XP_002011511.1| snf [Drosophila mojavensis]
gi|193906634|gb|EDW05501.1| snf [Drosophila mojavensis]
Length = 216
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV
Sbjct: 134 TQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFV 183
Query: 183 DFVSPAHAATAMDALQG 199
+F + + A +ALQG
Sbjct: 184 EFTTELQSNAAKEALQG 200
>gi|114681082|ref|XP_514523.2| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 5 [Pan
troglodytes]
gi|114681084|ref|XP_001137830.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 4 [Pan
troglodytes]
gi|296200238|ref|XP_002747509.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 2
[Callithrix jacchus]
gi|296200240|ref|XP_002747510.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like isoform 3
[Callithrix jacchus]
Length = 225
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|195340669|ref|XP_002036935.1| GM12396 [Drosophila sechellia]
gi|194131051|gb|EDW53094.1| GM12396 [Drosophila sechellia]
Length = 216
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 133 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 182
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 183 VEFTTELQSNAAKEALQG 200
>gi|297706381|ref|XP_002830019.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Pongo
abelii]
Length = 225
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|55732648|emb|CAH93023.1| hypothetical protein [Pongo abelii]
Length = 225
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|444729539|gb|ELW69952.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 225
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|395858003|ref|XP_003801365.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Otolemur
garnettii]
Length = 225
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|301115920|ref|XP_002905689.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
gi|262110478|gb|EEY68530.1| U1 small nuclear ribonucleoprotein A [Phytophthora infestans T30-4]
Length = 233
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF+E LP C++ + +F+ + G+KEVR+V PG L FV+F A AA
Sbjct: 158 NKILFLEELPESCNKEMLGVLFKQYQGFKEVRMV------PGKKG--LAFVEFGDEAQAA 209
Query: 192 TAMDALQG 199
A+ L G
Sbjct: 210 IALQGLFG 217
>gi|297824185|ref|XP_002879975.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
gi|297325814|gb|EFH56234.1| hypothetical protein ARALYDRAFT_903572 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 45 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 98
Query: 190 AATAMDALQG 199
A T M AL G
Sbjct: 99 AVTVMHALNG 108
>gi|194888638|ref|XP_001976948.1| GG18748 [Drosophila erecta]
gi|190648597|gb|EDV45875.1| GG18748 [Drosophila erecta]
Length = 216
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 133 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 182
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 183 VEFTTELQSNAAKEALQG 200
>gi|167537765|ref|XP_001750550.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770971|gb|EDQ84646.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--LCFVDFVSP 187
D S LF+E LPSD ++ + +F+ F G+KEVRLV P+ + FV++ +
Sbjct: 267 DPSPILFLENLPSDRTQEMLTALFKEFPGFKEVRLV----------PIRPDIGFVEYENE 316
Query: 188 AHAATAMDALQGQS 201
A+ A+ AL G+
Sbjct: 317 VQASAALPALNGKE 330
>gi|440893400|gb|ELR46188.1| U2 small nuclear ribonucleoprotein B'', partial [Bos grunniens
mutus]
Length = 233
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 144 GNATPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 196
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 197 -IAFVEFENDGQAGAARDALQG 217
>gi|157819927|ref|NP_001102062.1| U2 small nuclear ribonucleoprotein B'' [Rattus norvegicus]
gi|354492046|ref|XP_003508163.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cricetulus
griseus]
gi|149041257|gb|EDL95190.1| rCG27500, isoform CRA_c [Rattus norvegicus]
gi|197245976|gb|AAI68760.1| Small nuclear ribonucleoprotein polypeptide B'' [Rattus norvegicus]
Length = 225
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQG 199
+F + A A DALQG
Sbjct: 193 EFENDGQAGAARDALQG 209
>gi|291234607|ref|XP_002737237.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Saccoglossus
kowalevskii]
Length = 249
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ + LF+ LP + + + +F F +KEVRLV RH + FV+F +
Sbjct: 172 PPN--NILFLTNLPEETNEMMLQMLFNQFQAFKEVRLVP--GRHD------IAFVEFENE 221
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 222 TQAGVAKDALQG 233
>gi|148696478|gb|EDL28425.1| mCG19497, isoform CRA_b [Mus musculus]
Length = 203
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 114 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 166
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 167 ---IAFVEFENDGQAGAARDALQG 187
>gi|307190556|gb|EFN74543.1| U1 small nuclear ribonucleoprotein A [Camponotus floridanus]
Length = 184
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 107 PPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFENE 156
Query: 188 AHAATAMDALQG 199
+ A DALQG
Sbjct: 157 VQSGAAKDALQG 168
>gi|17737284|ref|NP_511045.1| sans fille [Drosophila melanogaster]
gi|1173325|sp|P43332.1|SNRPA_DROME RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A; AltName: Full=Sex
determination protein snf
gi|157172|gb|AAA28441.1| small nuclear ribonucleoprotein [Drosophila melanogaster]
gi|463051|gb|AAA28903.1| nuclear protein [Drosophila melanogaster]
gi|7290566|gb|AAF46017.1| sans fille [Drosophila melanogaster]
gi|16769640|gb|AAL29039.1| LD45302p [Drosophila melanogaster]
gi|220944458|gb|ACL84772.1| snf-PA [synthetic construct]
gi|220954252|gb|ACL89669.1| snf-PA [synthetic construct]
Length = 216
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQG 199
+ A +ALQG
Sbjct: 189 LQSNAAKEALQG 200
>gi|147902061|ref|NP_001088194.1| small nuclear ribonucleoprotein polypeptide B [Xenopus laevis]
gi|54035240|gb|AAH84107.1| LOC495019 protein [Xenopus laevis]
Length = 223
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 123 SEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
S+ P PD + LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 137 SQNPQVPDNPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 188
Query: 181 FVDFVSPAHAATAMDALQG 199
FV+F + A +A DALQG
Sbjct: 189 FVEFDNETEAGSARDALQG 207
>gi|344255667|gb|EGW11771.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 180
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 108 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENDGQAGAAR 159
Query: 195 DALQG 199
DALQG
Sbjct: 160 DALQG 164
>gi|195476907|ref|XP_002100029.1| GE16390 [Drosophila yakuba]
gi|194187553|gb|EDX01137.1| GE16390 [Drosophila yakuba]
Length = 216
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 133 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 182
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 183 VEFTTELQSNAAKEALQG 200
>gi|195046460|ref|XP_001992159.1| GH24608 [Drosophila grimshawi]
gi|193893000|gb|EDV91866.1| GH24608 [Drosophila grimshawi]
Length = 216
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 133 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 182
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 183 VEFTTELQSNAAKEALQG 200
>gi|116175273|ref|NP_001070696.1| uncharacterized protein LOC768116 [Sus scrofa]
gi|426240670|ref|XP_004014217.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Ovis
aries]
gi|115371759|gb|ABI96204.1| RU2B [Sus scrofa]
Length = 225
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQG 199
+F + A A DALQG
Sbjct: 193 EFENDGQAGAARDALQG 209
>gi|147902216|ref|NP_001085460.1| MGC80122 protein [Xenopus laevis]
gi|49257361|gb|AAH72799.1| MGC80122 protein [Xenopus laevis]
Length = 223
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 146 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 195
Query: 188 AHAATAMDALQG 199
A +A DALQG
Sbjct: 196 TEAGSARDALQG 207
>gi|50738734|ref|XP_419331.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Gallus
gallus]
gi|326914835|ref|XP_003203728.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Meleagris
gallopavo]
Length = 226
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 149 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 198
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 199 CQAGAARDALQG 210
>gi|410917616|ref|XP_003972282.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Takifugu rubripes]
Length = 246
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV PG + FV+F S
Sbjct: 169 PPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV------PGKHD--ISFVEFESD 218
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 219 VQAGVAKDALQG 230
>gi|324509983|gb|ADY44181.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F +
Sbjct: 25 VPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGY-ESSLLKITSKN-GKTASPVGFVTFST 82
Query: 187 PAHAATAMDALQG 199
A A A ALQG
Sbjct: 83 KAEADEARKALQG 95
>gi|148529834|gb|ABQ82149.1| RNA binding protein with multiple splicing 2, partial [Equus
caballus]
Length = 177
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 136 FVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMD 195
FV GLP D RE+ +FRPF GY E L+ SR P G FV F S A A A +
Sbjct: 1 FVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAAKN 53
Query: 196 ALQG 199
AL G
Sbjct: 54 ALNG 57
>gi|119630691|gb|EAX10286.1| small nuclear ribonucleoprotein polypeptide B'', isoform CRA_b
[Homo sapiens]
Length = 242
Score = 45.1 bits (105), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209
>gi|395859649|ref|XP_003802146.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Otolemur
garnettii]
Length = 231
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 154 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 203
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 204 VQAGAARDALQGFKITQNNAMKIS 227
>gi|348581624|ref|XP_003476577.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cavia
porcellus]
Length = 224
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 142 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 191
Query: 183 DFVSPAHAATAMDALQG 199
+F + A A DALQG
Sbjct: 192 EFENDGQAGAARDALQG 208
>gi|47211375|emb|CAF89828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 115 ALGLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG 173
A+ L ++VP PP+ LF+ LP + + ++ +F F G+KEVRLV PG
Sbjct: 127 AVPLHSPAAQVPDNPPN--YILFLTNLPEETNEMMLSMLFNQFPGFKEVRLV------PG 178
Query: 174 GDPLILCFVDFVSPAHAATAMDALQG 199
+ FV+F S A A DALQG
Sbjct: 179 KHD--IAFVEFESDLQAGVAKDALQG 202
>gi|840823|emb|CAA44752.1| U2-snRNP-specific b'' [Mus musculus]
Length = 123
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 34 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH---- 85
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 86 --DIAFVEFENDGQAGAARDALQG 107
>gi|194763787|ref|XP_001964014.1| GF21334 [Drosophila ananassae]
gi|190618939|gb|EDV34463.1| GF21334 [Drosophila ananassae]
Length = 216
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 133 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 182
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 183 VEFTTELQSNAAKEALQG 200
>gi|148696477|gb|EDL28424.1| mCG19497, isoform CRA_a [Mus musculus]
Length = 132
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 43 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 95
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 96 ---IAFVEFENDGQAGAARDALQG 116
>gi|363731244|ref|XP_003640940.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 1 [Gallus
gallus]
Length = 207
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 130 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 179
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 180 CQAGAARDALQG 191
>gi|300796380|ref|NP_001179481.1| U2 small nuclear ribonucleoprotein B'' [Bos taurus]
gi|426240672|ref|XP_004014218.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' isoform 2 [Ovis
aries]
gi|296481542|tpg|DAA23657.1| TPA: small nuclear ribonucleoprotein polypeptide B'' [Bos taurus]
Length = 218
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 129 GNATPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 181
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 182 -IAFVEFENDGQAGAARDALQG 202
>gi|291389004|ref|XP_002711008.1| PREDICTED: small nuclear ribonucleoprotein polypeptide B''
[Oryctolagus cuniculus]
Length = 225
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQG 199
+F + A A DALQG
Sbjct: 193 EFENDGQAGAARDALQG 209
>gi|149041255|gb|EDL95188.1| rCG27500, isoform CRA_a [Rattus norvegicus]
Length = 132
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 60 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH------DIAFVEFENDGQAGAAR 111
Query: 195 DALQG 199
DALQG
Sbjct: 112 DALQG 116
>gi|358385005|gb|EHK22602.1| hypothetical protein TRIVIDRAFT_22864, partial [Trichoderma virens
Gv29-8]
Length = 437
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F P GYK + +K++ +CFV+F HA
Sbjct: 297 NTLYVGNLPIDTSEEELKALFSPVRGYKRLCFRTKQNGP-------MCFVEFEDIGHATK 349
Query: 193 AMDALQGQSNIICLSNLV 210
A+ L G CL N V
Sbjct: 350 ALSQLYG----WCLHNSV 363
>gi|58331942|ref|NP_001011120.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
gi|54038268|gb|AAH84519.1| hypothetical LOC496533 [Xenopus (Silurana) tropicalis]
gi|89268683|emb|CAJ82680.1| small nuclear ribonucleoprotein polypeptide B [Xenopus (Silurana)
tropicalis]
Length = 223
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 146 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 195
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 196 TEAGAARDALQG 207
>gi|324504525|gb|ADY41956.1| Protein couch potato [Ascaris suum]
Length = 340
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F +
Sbjct: 25 VPPAQVRTLFVSGLPMDAKPRELYLLFRAYSGY-ESSLLKITSKN-GKTASPVGFVTFST 82
Query: 187 PAHAATAMDALQG 199
A A A ALQG
Sbjct: 83 KAEADEARKALQG 95
>gi|297743906|emb|CBI36876.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 118 LGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
LGG +S VP P ++ LF++ LP + + + F + G+KEVR+V + PG
Sbjct: 142 LGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAK---PG--- 195
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV++ + AM LQG
Sbjct: 196 --IAFVEYGDEMQSTVAMQGLQG 216
>gi|225437410|ref|XP_002270967.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Vitis vinifera]
Length = 245
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 118 LGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
LGG +S VP P ++ LF++ LP + + + F + G+KEVR+V + PG
Sbjct: 155 LGGAKSAVPEAPAPPNNILFIQNLPHEATPMMLQMFFCQYPGFKEVRMVEAK---PG--- 208
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV++ + AM LQG
Sbjct: 209 --IAFVEYGDEMQSTVAMQGLQG 229
>gi|148706068|gb|EDL38015.1| mCG22457 [Mus musculus]
Length = 275
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 16/84 (19%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 200 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLV----RHD------IAFVEFDNE 247
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 248 VQAGAARDALQGFKITQNNAMKIS 271
>gi|41054443|ref|NP_955965.1| U1 small nuclear ribonucleoprotein A [Danio rerio]
gi|39850066|gb|AAH64308.1| Small nuclear ribonucleoprotein polypeptide A [Danio rerio]
Length = 281
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A +ALQG QSN + +S
Sbjct: 254 VQAGAAREALQGFKITQSNAMKIS 277
>gi|295314954|gb|ADF97627.1| small nuclear ribonucleoprotein polypeptide A [Hypophthalmichthys
molitrix]
Length = 281
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A +ALQG QSN + +S
Sbjct: 254 VQAGAAREALQGFKITQSNAMKIS 277
>gi|149041256|gb|EDL95189.1| rCG27500, isoform CRA_b [Rattus norvegicus]
Length = 203
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 121 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 170
Query: 183 DFVSPAHAATAMDALQG 199
+F + A A DALQG
Sbjct: 171 EFENDGQAGAARDALQG 187
>gi|50311967|ref|XP_456015.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645151|emb|CAG98723.1| KLLA0F20834p [Kluyveromyces lactis]
Length = 616
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G+K + +K + + G P +CFV+F AHA
Sbjct: 449 NTLYVGNLPPDATEQELRQLFGGQKGFKRLSFRNKNNNNSGHGP--MCFVEFEDVAHATR 506
Query: 193 AMDALQG 199
A+ L G
Sbjct: 507 ALAELYG 513
>gi|359358253|gb|AEV40671.1| SNF [Antheraea pernyi]
Length = 228
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 10/75 (13%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
V PP+ LF+ LP + S ++ +F F G+KEVRLV +RH + FV+F
Sbjct: 148 VEQPPN--QILFLTNLPDETSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEF 197
Query: 185 VSPAHAATAMDALQG 199
+ +A A +ALQG
Sbjct: 198 GNEMQSAAAKEALQG 212
>gi|357482791|ref|XP_003611682.1| RNA-binding protein with multiple splicing [Medicago truncatula]
gi|355513017|gb|AES94640.1| RNA-binding protein with multiple splicing [Medicago truncatula]
Length = 340
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLF+ GLP D RE+ ++FR F GY+ L R P F F + A A
Sbjct: 83 TLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPNNSSQAFAFAVFSNQQSAIMA 137
Query: 194 MDALQG 199
+ AL G
Sbjct: 138 LHALNG 143
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P +TLFV L C+ +E+ +F F G+ ++++ S G P+ FVDF
Sbjct: 245 IPTNTTPCATLFVANLGPSCNEQELIQVFSRFPGFLKLKMQSTY-----GAPV--SFVDF 297
Query: 185 VSPAHAATAMDALQG 199
A A+++LQG
Sbjct: 298 KDIPSATVALNSLQG 312
>gi|349605397|gb|AEQ00652.1| U2 small nuclear ribonucleoprotein B''-like protein, partial [Equus
caballus]
Length = 197
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 125 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENDGQAGAAR 176
Query: 195 DALQG 199
DALQG
Sbjct: 177 DALQG 181
>gi|432109445|gb|ELK33675.1| U1 small nuclear ribonucleoprotein A [Myotis davidii]
Length = 282
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|355721048|gb|AES07135.1| small nuclear ribonucleoprotein polypeptide B [Mustela putorius
furo]
Length = 99
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 114 RALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
A G + P PD + LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 4 NAANTQGNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRH 61
Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 62 D------IAFVEFENDGQAGAARDALQG 83
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG ++ +STL ++ +P + S++E+ +F+ + K +R+ K RH G
Sbjct: 557 AGGEAQESKAGRPTSTLVIKNVPFEVSKKELQALFKSYGNIKSLRMPRKADRHTRG---- 612
Query: 179 LCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
FV+F S A A A AL Q++++ +LV+ Y
Sbjct: 613 FAFVEFRSTAEAKEAKQAL-SQTHLLG-RHLVIEY 645
>gi|126329351|ref|XP_001371614.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Monodelphis
domestica]
Length = 340
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 263 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 312
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 313 VQAGAARDALQGFKITQNNAMKIS 336
>gi|449512588|ref|XP_004176179.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Taeniopygia
guttata]
Length = 221
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 11/79 (13%)
Query: 122 RSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
+++VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH +
Sbjct: 137 QNQVPDNPPNC--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IA 186
Query: 181 FVDFVSPAHAATAMDALQG 199
FV+F + A A DALQG
Sbjct: 187 FVEFENENQAGAARDALQG 205
>gi|431920192|gb|ELK18231.1| U1 small nuclear ribonucleoprotein A [Pteropus alecto]
Length = 282
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|327276255|ref|XP_003222885.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Anolis
carolinensis]
Length = 280
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 203 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 252
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 253 VQAGAARDALQGFKITQNNAMKIS 276
>gi|297716585|ref|XP_002834591.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Pongo abelii]
Length = 99
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 27 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENDGQAGAAR 78
Query: 195 DALQG 199
DALQG
Sbjct: 79 DALQG 83
>gi|255710361|gb|ACU31000.1| U1 small nuclear ribonucleoprotein A [Ochlerotatus triseriatus]
Length = 202
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 125 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFATE 174
Query: 188 AHAATAMDALQG 199
+ A +ALQG
Sbjct: 175 LQSGAAREALQG 186
>gi|390479015|ref|XP_003735632.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Callithrix jacchus]
Length = 275
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 198 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 247
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 248 VQAGAARDALQGFKITQNNAMKIS 271
>gi|195554301|ref|XP_002076873.1| GD24751 [Drosophila simulans]
gi|194202891|gb|EDX16467.1| GD24751 [Drosophila simulans]
Length = 169
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 86 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 135
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 136 VEFTTELQSNAAKEALQG 153
>gi|351715411|gb|EHB18330.1| U1 small nuclear ribonucleoprotein A [Heterocephalus glaber]
Length = 282
Score = 44.7 bits (104), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|417409102|gb|JAA51075.1| Putative spliceosomal protein snrnp-u1a/u2b, partial [Desmodus
rotundus]
Length = 258
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 181 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 230
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 231 VQAGAARDALQGFKITQNNAMKIS 254
>gi|383873129|ref|NP_001244434.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|114677331|ref|XP_512674.2| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 2 [Pan
troglodytes]
gi|297704832|ref|XP_002829283.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pongo abelii]
gi|397482634|ref|XP_003812525.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Pan paniscus]
gi|402905610|ref|XP_003915609.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Papio anubis]
gi|355703564|gb|EHH30055.1| hypothetical protein EGK_10636 [Macaca mulatta]
gi|355755853|gb|EHH59600.1| hypothetical protein EGM_09749 [Macaca fascicularis]
gi|380784673|gb|AFE64212.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|383414025|gb|AFH30226.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|384943590|gb|AFI35400.1| U1 small nuclear ribonucleoprotein A [Macaca mulatta]
gi|410207170|gb|JAA00804.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
gi|410287236|gb|JAA22218.1| small nuclear ribonucleoprotein polypeptide A [Pan troglodytes]
Length = 282
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|125983292|ref|XP_001355411.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|195162057|ref|XP_002021872.1| GL14287 [Drosophila persimilis]
gi|54643726|gb|EAL32469.1| GA18235 [Drosophila pseudoobscura pseudoobscura]
gi|194103770|gb|EDW25813.1| GL14287 [Drosophila persimilis]
Length = 216
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
++ PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + F
Sbjct: 133 NTQTEQPPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAF 182
Query: 182 VDFVSPAHAATAMDALQG 199
V+F + + A +ALQG
Sbjct: 183 VEFTTELQSNAAKEALQG 200
>gi|426388777|ref|XP_004060809.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Gorilla
gorilla gorilla]
Length = 282
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|307202215|gb|EFN81702.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Harpegnathos saltator]
Length = 907
Score = 44.7 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ E+ IF+ + KEVRLV+ + H G L +V++ A AA A+
Sbjct: 752 LFVKGLPITTTKEELEEIFKIYGALKEVRLVTYRNGHSKG----LAYVEYCDEATAAKAL 807
Query: 195 DALQG 199
+ G
Sbjct: 808 LGIDG 812
>gi|116175267|ref|NP_001070690.1| U1 small nuclear ribonucleoprotein A [Sus scrofa]
gi|122131847|sp|Q06AA4.1|SNRPA_PIG RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|115371743|gb|ABI96196.1| SNRPA [Sus scrofa]
Length = 282
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|4759156|ref|NP_004587.1| U1 small nuclear ribonucleoprotein A [Homo sapiens]
gi|134092|sp|P09012.3|SNRPA_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|315583598|pdb|3PGW|A Chain A, Crystal Structure Of Human U1 Snrnp
gi|315583607|pdb|3PGW|P Chain P, Crystal Structure Of Human U1 Snrnp
gi|37541|emb|CAA29653.1| unnamed protein product [Homo sapiens]
gi|340052|gb|AAA61245.1| U1 snRNP-specific protein A [Homo sapiens]
gi|12653273|gb|AAH00405.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|14249835|gb|AAH08290.1| Small nuclear ribonucleoprotein polypeptide A [Homo sapiens]
gi|119577399|gb|EAW56995.1| small nuclear ribonucleoprotein polypeptide A, isoform CRA_a [Homo
sapiens]
gi|208967436|dbj|BAG73732.1| small nuclear ribonucleoprotein polypeptide A [synthetic construct]
Length = 282
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|354486243|ref|XP_003505291.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
A-like [Cricetulus griseus]
Length = 284
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 207 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 256
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 257 VQAGAARDALQGFKITQNNAMKIS 280
>gi|348552486|ref|XP_003462058.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Cavia
porcellus]
Length = 282
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|189053747|dbj|BAG35999.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|440910289|gb|ELR60098.1| U1 small nuclear ribonucleoprotein A, partial [Bos grunniens mutus]
Length = 287
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 259
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 260 VQAGAARDALQGFKITQNNAMKIS 283
>gi|114051315|ref|NP_001039504.1| U1 small nuclear ribonucleoprotein A [Bos taurus]
gi|187607541|ref|NP_001119825.1| U1 small nuclear ribonucleoprotein A [Ovis aries]
gi|122142801|sp|Q2KIR1.1|SNRPA_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|86437996|gb|AAI12545.1| Small nuclear ribonucleoprotein polypeptide A [Bos taurus]
gi|184191137|gb|ACC76781.1| SNPRA [Ovis aries]
gi|296477802|tpg|DAA19917.1| TPA: U1 small nuclear ribonucleoprotein A [Bos taurus]
Length = 282
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|410983004|ref|XP_003997834.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Felis catus]
Length = 282
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|195448090|ref|XP_002071505.1| GK25839 [Drosophila willistoni]
gi|194167590|gb|EDW82491.1| GK25839 [Drosophila willistoni]
Length = 216
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188
Query: 188 AHAATAMDALQG 199
+ A +ALQG
Sbjct: 189 LQSNAAKEALQG 200
>gi|441653781|ref|XP_003270568.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Nomascus
leucogenys]
Length = 211
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 139 LFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRH------DIAFVEFDNEVQAGAAR 190
Query: 195 DALQG----QSNIICLS 207
DALQG Q+N + +S
Sbjct: 191 DALQGFKITQNNAMKIS 207
>gi|73948310|ref|XP_533663.2| PREDICTED: U1 small nuclear ribonucleoprotein A [Canis lupus
familiaris]
gi|149722301|ref|XP_001499386.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Equus
caballus]
gi|301776649|ref|XP_002923740.1| PREDICTED: u1 small nuclear ribonucleoprotein A-like [Ailuropoda
melanoleuca]
gi|403305332|ref|XP_003943221.1| PREDICTED: U1 small nuclear ribonucleoprotein A [Saimiri
boliviensis boliviensis]
gi|281340732|gb|EFB16316.1| hypothetical protein PANDA_012942 [Ailuropoda melanoleuca]
Length = 282
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|444732044|gb|ELW72368.1| U1 small nuclear ribonucleoprotein A [Tupaia chinensis]
Length = 282
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|255587763|ref|XP_002534389.1| RNA binding protein, putative [Ricinus communis]
gi|223525395|gb|EEF27997.1| RNA binding protein, putative [Ricinus communis]
Length = 318
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L R P F F
Sbjct: 72 DLVRTLFVAGLPEDVMPREIYNLFREFPGYESSHL-----RTPTQTSQPFAFATFADQPS 126
Query: 190 AATAMDALQG 199
A AM AL G
Sbjct: 127 AVAAMHALNG 136
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 111 AKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESR 170
AK + S P P TLFV L +C+ +E+ +F F G+ ++++ S
Sbjct: 220 AKTETKSINSNNSSAPPCP----TLFVANLGPNCTEQELTQLFSRFAGFLKLKMQSTY-- 273
Query: 171 HPGGDPLILCFVDFVSPAHAATAMDALQG 199
G P + FVDF A + A++ LQG
Sbjct: 274 ---GAP--VAFVDFQDTACSTGALNHLQG 297
>gi|114052106|ref|NP_056597.3| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|114052541|ref|NP_001040102.1| U1 small nuclear ribonucleoprotein A [Mus musculus]
gi|41017904|sp|Q62189.3|SNRPA_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|349004|gb|AAC37611.1| small nuclear RNA [Mus musculus]
gi|13096860|gb|AAH03229.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|62740156|gb|AAH94006.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|66794539|gb|AAH96648.1| Small nuclear ribonucleoprotein polypeptide A [Mus musculus]
gi|148692250|gb|EDL24197.1| mCG22754, isoform CRA_a [Mus musculus]
gi|148692251|gb|EDL24198.1| mCG22754, isoform CRA_a [Mus musculus]
Length = 287
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 259
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 260 VQAGAARDALQGFKITQNNAMKIS 283
>gi|12851426|dbj|BAB29037.1| unnamed protein product [Mus musculus]
Length = 287
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 259
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 260 VQAGAARDALQGFKITQNNAMKIS 283
>gi|395859647|ref|XP_003802145.1| PREDICTED: U1 small nuclear ribonucleoprotein A isoform 1 [Otolemur
garnettii]
Length = 282
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|194375486|dbj|BAG56688.1| unnamed protein product [Homo sapiens]
Length = 203
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 131 LFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRH------DIAFVEFDNEVQAGAAR 182
Query: 195 DALQG----QSNIICLS 207
DALQG Q+N + +S
Sbjct: 183 DALQGFKITQNNAMKIS 199
>gi|56605690|ref|NP_001008304.1| U1 small nuclear ribonucleoprotein A [Rattus norvegicus]
gi|55562825|gb|AAH86331.1| Small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
gi|149056537|gb|EDM07968.1| small nuclear ribonucleoprotein polypeptide A [Rattus norvegicus]
Length = 281
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 254 VQAGAARDALQGFKITQNNAMKIS 277
>gi|355721034|gb|AES07131.1| small nuclear ribonucleoprotein polypeptide A [Mustela putorius
furo]
Length = 281
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278
>gi|147802946|emb|CAN64038.1| hypothetical protein VITISV_021557 [Vitis vinifera]
Length = 335
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLF+ GLP D RE+ ++FR F GY+ L R P + F F+
Sbjct: 75 DEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RSPSQNSQPFAFAVFLDQQS 129
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 130 AIATMHALNG 139
>gi|157103841|ref|XP_001648152.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|157133359|ref|XP_001656219.1| U1 small nuclear ribonucleoprotein A [Aedes aegypti]
gi|108869334|gb|EAT33559.1| AAEL014167-PA [Aedes aegypti]
gi|108881556|gb|EAT45781.1| AAEL002980-PA [Aedes aegypti]
Length = 216
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFATE 188
Query: 188 AHAATAMDALQG 199
+ A +ALQG
Sbjct: 189 LQSGAAREALQG 200
>gi|431894149|gb|ELK03949.1| U2 small nuclear ribonucleoprotein B'' [Pteropus alecto]
Length = 291
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 205 QVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 254
Query: 183 DFVSPAHAATAMDALQG 199
+F + A A DALQG
Sbjct: 255 EFENDGQAGAARDALQG 271
>gi|225716164|gb|ACO13928.1| RNA-binding protein with multiple splicing [Esox lucius]
Length = 100
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FRPF GY E L+ S+ P G FV F + A A
Sbjct: 22 TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRTGAEAA 74
Query: 194 MDALQ 198
+AL
Sbjct: 75 KNALN 79
>gi|170070159|ref|XP_001869484.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
gi|167866053|gb|EDS29436.1| U1 small nuclear ribonucleoprotein A [Culex quinquefasciatus]
Length = 216
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFATE 188
Query: 188 AHAATAMDALQG 199
+ A +ALQG
Sbjct: 189 LQSGAAREALQG 200
>gi|356526031|ref|XP_003531623.1| PREDICTED: uncharacterized protein LOC100783764 [Glycine max]
Length = 264
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLF+ L +C+ E+ F + G+ V++ S+ GG P + FVDF AA
Sbjct: 182 STLFIANLGPNCTEDELKQAFSAYTGFNMVKMRSR-----GGMP--VAFVDFEETHQAAK 234
Query: 193 AMDALQG 199
M+ LQG
Sbjct: 235 VMEELQG 241
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 193 AMDALQG 199
A+ AL G
Sbjct: 76 ALHALNG 82
>gi|159470585|ref|XP_001693437.1| predicted protein [Chlamydomonas reinhardtii]
gi|158282940|gb|EDP08691.1| predicted protein [Chlamydomonas reinhardtii]
Length = 233
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LFV+ LP + + +F+ F G++EVR+V E+R PG + FV++ + +
Sbjct: 158 NKILFVQNLPETSNEAMLGMLFQQFPGFREVRMV--EAR-PG-----IAFVEYENEMQSG 209
Query: 192 TAMDALQG 199
TAM LQG
Sbjct: 210 TAMQGLQG 217
>gi|387018110|gb|AFJ51173.1| U1 small nuclear ribonucleoprotein A [Crotalus adamanteus]
Length = 281
Score = 44.3 bits (103), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 253
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 254 VQAGAARDALQGFKITQNNAMKIS 277
>gi|225719260|gb|ACO15476.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
L G + P + LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 127 ALAGANAAHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD---- 180
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV+F + +A A ++LQG
Sbjct: 181 --IAFVEFENEVQSAAARESLQG 201
>gi|449513226|ref|XP_002193869.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Taeniopygia
guttata]
Length = 322
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 245 PPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 294
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 295 NQAGAARDALQG 306
>gi|440804858|gb|ELR25722.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 287
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 87 GGMPSRPVDDPRIVGIGGMDPGPSA-----KDRALGLGGGRSEVPLPPDASSTLFVEGLP 141
G+ P + P + G+ M P P A +DR L G+S V PP STLF+ L
Sbjct: 148 AGLAGYPFNPPSMYGLSSMGPVPDAYLLGGQDR-LPKPAGKSLVRFPP--GSTLFISNLG 204
Query: 142 SDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ S +E++ +F F G+ +L ++ I FV + + A++ LQG
Sbjct: 205 TASSEQEISEVFGAFQGFVRAQLYNRGHN-------INAFVQYKDYESSTQALNHLQG 255
>gi|12850013|dbj|BAB28565.1| unnamed protein product [Mus musculus]
Length = 225
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH
Sbjct: 136 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 188
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV+F A A DALQG
Sbjct: 189 ---IAFVEFEYDGQAGAARDALQG 209
>gi|405974726|gb|EKC39350.1| U1 small nuclear ribonucleoprotein A [Crassostrea gigas]
Length = 541
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 464 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 513
Query: 188 AHAATAMDALQG 199
+ A DALQG
Sbjct: 514 VQSGAAKDALQG 525
>gi|407923615|gb|EKG16684.1| hypothetical protein MPH_06138 [Macrophomina phaseolina MS6]
Length = 117
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 109 PSAKDRALGL---GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
P+ K R GL GG + +P LPP+ LFV+ LP ++ IF F G+KEV
Sbjct: 14 PTQKARGAGLKSTGGAAAVIPDEYLPPN--KILFVQNLPDGYDVEALSAIFGRFEGFKEV 71
Query: 163 RLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQS 201
RLV S + FV++ + A A +A +A G +
Sbjct: 72 RLVPGRSG--------IAFVEYEAEAGAISAKEATAGMA 102
>gi|85109011|ref|XP_962704.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|28924315|gb|EAA33468.1| hypothetical protein NCU08034 [Neurospora crassa OR74A]
gi|39979161|emb|CAE85534.1| related to small nuclear ribonucleoprotein snRNP U1A [Neurospora
crassa]
Length = 247
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 34/140 (24%)
Query: 83 RHMSGGMP-SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP---LPPDASSTLFVE 138
R + G P +RP + R G+ GP+A VP LPP+ LFV+
Sbjct: 132 RPLQGAAPDARPAKNQRGAGLKATGQGPAAV------------VPDEYLPPN--RILFVQ 177
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
LP D ++ ++ IF F G++EVR V PG + FV++ + A A TA +
Sbjct: 178 NLPDDFTKDDLTTIFSRFDGFREVRTV------PGRSG--IAFVEYDAEAGAITAKENTA 229
Query: 199 GQSNIICLSN----LVVFYQ 214
G + L N + V YQ
Sbjct: 230 G----MALKNGEKIMKVTYQ 245
>gi|157836397|pdb|2U1A|A Chain A, Rna Binding Domain 2 Of Human U1a Protein, Nmr, 20
Structures
Length = 88
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 11 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 60
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 61 VQAGAARDALQGFKITQNNAMKIS 84
>gi|213405979|ref|XP_002173761.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
gi|212001808|gb|EEB07468.1| cell wall integrity protein scw1 [Schizosaccharomyces japonicus
yFS275]
Length = 565
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+T++V LP S E+ +F GYK + +K G P+ CFV+F S A+A
Sbjct: 438 NTIYVGNLPPSTSEDELKALFSTQPGYKRLCFRTK-----GNGPM--CFVEFESIAYATE 490
Query: 193 AMDALQGQSNIICLSNLV 210
A+ ALQG +CLS+ V
Sbjct: 491 ALKALQG----VCLSSSV 504
>gi|224146679|ref|XP_002326095.1| predicted protein [Populus trichocarpa]
gi|222862970|gb|EEF00477.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G ++ +PP+ + LF++ LP + + + +F+ + G++EVR++ + PG
Sbjct: 147 GNQSAQETVPPN--NILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAK---PG----- 196
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FV+F ++ AM ALQG
Sbjct: 197 IAFVEFEDDVQSSMAMQALQG 217
>gi|385301643|gb|EIF45820.1| multiple rna-binding domain-containing protein 1 [Dekkera
bruxellensis AWRI1499]
Length = 136
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ + V+ LP + SR +V +F F K VR+ K R G FV+F + A
Sbjct: 13 STKIIVKNLPFEASRDDVFQLFSSFAHLKSVRVPKKFDRSARG----FAFVEFNTVKEAE 68
Query: 192 TAMDALQG 199
T MD LQG
Sbjct: 69 TVMDQLQG 76
>gi|440355222|gb|AGC00413.1| SNF [Antheraea pernyi]
Length = 222
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
V PP+ LF+ LP S ++ +F F G+KEVRLV +RH + FV+F
Sbjct: 142 VEQPPN--QILFLTNLPDGTSEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEF 191
Query: 185 VSPAHAATAMDALQG 199
+ +A A +ALQG
Sbjct: 192 GNEMQSAAAKEALQG 206
>gi|298204782|emb|CBI25280.3| unnamed protein product [Vitis vinifera]
Length = 299
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D T+F+ GLP D RE+ ++ R GY E V+ + HP G F F +P
Sbjct: 47 DEVRTIFISGLPEDVKERELQNLLRWLPGY-EASQVNFKGEHPMG------FALFSTPQL 99
Query: 190 AATAMDALQ 198
A A DALQ
Sbjct: 100 AVAAKDALQ 108
>gi|122919626|pdb|2B0G|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
gi|134103993|pdb|2AYM|A Chain A, Solution Structure Of Drosophila Melanogaster Snf Rbd2
Length = 83
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV +RH + FV+F +
Sbjct: 6 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 55
Query: 188 AHAATAMDALQG 199
+ A +ALQG
Sbjct: 56 LQSNAAKEALQG 67
>gi|225710606|gb|ACO11149.1| U1 small nuclear ribonucleoprotein A [Caligus rogercresseyi]
Length = 217
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
L G + P + LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 127 ALAGANAVHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD---- 180
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV+F + +A A ++LQG
Sbjct: 181 --IAFVEFENEVQSAAARESLQG 201
>gi|449513275|ref|XP_004175808.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Taeniopygia guttata]
Length = 99
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV PG + FV+F + A A
Sbjct: 27 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLV------PGRQ--DIAFVEFENENQAGAAR 78
Query: 195 DALQG 199
DALQG
Sbjct: 79 DALQG 83
>gi|449679798|ref|XP_002163097.2| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Hydra
magnipapillata]
Length = 219
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
G ++ +P + LF+ LP + + +A +F+ F GYKEVRLV RH +
Sbjct: 133 GHMQMQMPEIPNQILFLSELPDETTEIMLAMLFQQFDGYKEVRLVP--GRHD------IA 184
Query: 181 FVDFVSPAHAATAMDALQG 199
FV+F A A D L G
Sbjct: 185 FVEFEEAEKARIAKDTLNG 203
>gi|344250312|gb|EGW06416.1| U1 small nuclear ribonucleoprotein A [Cricetulus griseus]
Length = 291
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 214 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 263
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A DALQG Q+N + +S
Sbjct: 264 VQAGAARDALQGFKITQNNAMKIS 287
>gi|225443274|ref|XP_002273578.1| PREDICTED: cell wall integrity protein scw1-like [Vitis vinifera]
Length = 328
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D T+F+ GLP D RE+ ++ R GY E V+ + HP G F F +P
Sbjct: 47 DEVRTIFISGLPEDVKERELQNLLRWLPGY-EASQVNFKGEHPMG------FALFSTPQL 99
Query: 190 AATAMDALQ 198
A A DALQ
Sbjct: 100 AVAAKDALQ 108
>gi|149597291|ref|XP_001509496.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like
[Ornithorhynchus anatinus]
Length = 139
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 67 LFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRH------DIAFVEFDNEVQAGAAR 118
Query: 195 DALQG----QSNIICLS 207
DALQG Q+N + +S
Sbjct: 119 DALQGFKITQNNAMKIS 135
>gi|50285445|ref|XP_445151.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691154|sp|Q6FXP4.1|MRD1_CANGA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49524454|emb|CAG58051.1| unnamed protein product [Candida glabrata]
Length = 861
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R++V +F F K VR+ K + G FV+FV P A AM
Sbjct: 740 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFVLPKEAENAM 795
Query: 195 DALQG 199
D LQG
Sbjct: 796 DQLQG 800
>gi|410075077|ref|XP_003955121.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
gi|372461703|emb|CCF55986.1| hypothetical protein KAFR_0A05510 [Kazachstania africana CBS 2517]
Length = 850
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 722 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 777
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 778 AAMDQLQG 785
>gi|365982081|ref|XP_003667874.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
gi|343766640|emb|CCD22631.1| hypothetical protein NDAI_0A04750 [Naumovozyma dairenensis CBS 421]
Length = 843
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ + V+ LP + +R++V +F F K VR+ K + G F++F+ P A
Sbjct: 742 SAKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFIEFLLPKEAE 797
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 798 NAMDQLQG 805
>gi|225713086|gb|ACO12389.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
L G + P + LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 127 ALAGANAVHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD---- 180
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV+F + +A A ++LQG
Sbjct: 181 --IAFVEFENEVQSAAARESLQG 201
>gi|449439191|ref|XP_004137370.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
gi|449520549|ref|XP_004167296.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' 2-like [Cucumis
sativus]
Length = 231
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LF+E LP + S + +F+ + G++EVR++ + PG + FV+F ++
Sbjct: 156 NNILFIENLPHETSSMMLQVLFQQYPGFREVRMIEAK---PG-----IAFVEFEDDVQSS 207
Query: 192 TAMDALQG 199
AM ALQG
Sbjct: 208 MAMQALQG 215
>gi|260827881|ref|XP_002608892.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
gi|229294246|gb|EEN64902.1| hypothetical protein BRAFLDRAFT_124249 [Branchiostoma floridae]
Length = 256
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + +
Sbjct: 181 NNILFLTNLPEETTEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNEMQSG 232
Query: 192 TAMDALQG 199
A DALQG
Sbjct: 233 AARDALQG 240
>gi|350597108|ref|XP_003362224.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Sus scrofa]
Length = 262
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C+R E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 102 LFISGLPFSCTREELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 157
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 158 LKMDGMTVKENII 170
>gi|443720886|gb|ELU10438.1| hypothetical protein CAPTEDRAFT_179768 [Capitella teleta]
Length = 218
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G++EVRLV RH + FV+F + A A
Sbjct: 146 LFLTNLPEETTEMMLSMLFNQFPGFREVRLVP--GRHD------IAFVEFENEVQAGAAK 197
Query: 195 DALQG 199
DALQG
Sbjct: 198 DALQG 202
>gi|213510744|ref|NP_001134742.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
gi|209735590|gb|ACI68664.1| U1 small nuclear ribonucleoprotein A [Salmo salar]
Length = 281
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 204 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDND 253
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A +ALQG Q+N + +S
Sbjct: 254 VQAGAAREALQGFKITQTNAMKIS 277
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 43.9 bits (102), Expect = 0.055, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAHA 190
S LFV LP C+ ++ +F F EV + + KE++ P G FV F+ P HA
Sbjct: 606 SGRLFVRNLPYTCTEDDLIALFSKFGQLAEVHMPIDKETKKPTG----FAFVLFLMPEHA 661
Query: 191 ATAMDALQGQS 201
TA AL G +
Sbjct: 662 VTAFRALDGST 672
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ L V +P + +R+E+ +F PF K VRL K PGG F++F++ A
Sbjct: 1062 STKLIVRNVPFEATRKELFDVFSPFGQLKSVRLPQK----PGGQHRGFAFIEFLTKEEAK 1117
Query: 192 TAMDALQG 199
A ++L+
Sbjct: 1118 KAFESLKA 1125
>gi|225719682|gb|ACO15687.1| U1 small nuclear ribonucleoprotein A [Caligus clemensi]
Length = 217
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
L G + P + LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 127 ALAGANAVHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD---- 180
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV+F + +A A ++LQG
Sbjct: 181 --IAFVEFENEVQSAAARESLQG 201
>gi|156088273|ref|XP_001611543.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798797|gb|EDO07975.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 285
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLFVEGLP S +V +F VG++E R+++ + F+DF + +A
Sbjct: 212 NRTLFVEGLPEGVSLADVNAVFARSVGFQEARVIAARK---------VAFIDFDNEFNAG 262
Query: 192 TAMDALQ 198
AM ALQ
Sbjct: 263 CAMQALQ 269
>gi|426246411|ref|XP_004016988.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Ovis aries]
Length = 225
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 11/77 (14%)
Query: 124 EVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFV 182
+VP PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV
Sbjct: 143 QVPDYPPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFV 192
Query: 183 DFVSPAHAATAMDALQG 199
+F + A DALQG
Sbjct: 193 EFENDGQAGAGRDALQG 209
>gi|28207152|gb|AAO37216.1| hypothetical protein [Arabidopsis thaliana]
Length = 204
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIXNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 85
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 86 AVAVMHALNG 95
>gi|367001456|ref|XP_003685463.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
gi|357523761|emb|CCE63029.1| hypothetical protein TPHA_0D03960 [Tetrapisispora phaffii CBS 4417]
Length = 872
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 745 SGKIIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 800
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 801 NAMDQLQG 808
>gi|254580399|ref|XP_002496185.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
gi|238939076|emb|CAR27252.1| ZYRO0C12452p [Zygosaccharomyces rouxii]
Length = 866
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 120 GGRSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG + P S + V+ LP + +R++V +F F K VR+ K + G
Sbjct: 726 GGSTNAPKQTRKKSGKIIVKNLPFEAARKDVFELFSSFGQLKSVRVPKKFDKSARG---- 781
Query: 179 LCFVDFVSPAHAATAMDALQG 199
FV+F+ P A AMD LQG
Sbjct: 782 FAFVEFLLPKEAENAMDQLQG 802
>gi|226372064|gb|ACO51657.1| U1 small nuclear ribonucleoprotein A [Rana catesbeiana]
Length = 279
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 202 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 251
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A ++LQG QSN + +S
Sbjct: 252 VQAGAARESLQGFKITQSNSMKIS 275
>gi|384247265|gb|EIE20752.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 129
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFV 185
LPP+ + L+V LP + S E+ IF F G +++RL SKE+R +V +
Sbjct: 10 LPPEVNRVLYVRNLPFNISSEEMYDIFGKFGGVRQIRLGTSKETRGT-------AYVVYE 62
Query: 186 SPAHAATAMDALQGQSNIICLSNLVVFYQIACE 218
A TA+D L G N+ +V++Y + +
Sbjct: 63 DIYDAKTAVDHLSG-FNVANRYLIVLYYNTSKQ 94
>gi|47226485|emb|CAG08501.1| unnamed protein product [Tetraodon nigroviridis]
Length = 909
Score = 43.5 bits (101), Expect = 0.072, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
+F+ GLP C++ ++ + + + K+VRLV+ S P G L +V+F HA+ A
Sbjct: 748 IFISGLPFSCTKEQLKEVCKSYGTIKDVRLVTYRSGKPKG----LAYVEFTEETHASQAV 803
Query: 194 --MDALQGQSNIICLS 207
MD + N I ++
Sbjct: 804 LKMDGMVIDGNTISVA 819
>gi|442760027|gb|JAA72172.1| Putative spliceosomal protein snrnp-u1a/u2b [Ixodes ricinus]
Length = 239
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 160 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 209
Query: 188 AHAATAMDALQG 199
++ A +ALQG
Sbjct: 210 IQSSAAKEALQG 221
>gi|126723082|ref|NP_001075629.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
gi|38641409|gb|AAR26269.1| nuclear ribonucleoprotein A [Oryctolagus cuniculus]
Length = 282
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A D+LQG Q+N + +S
Sbjct: 255 VQAGAARDSLQGFKITQNNAMKIS 278
>gi|171690714|ref|XP_001910282.1| hypothetical protein [Podospora anserina S mat+]
gi|170945305|emb|CAP71417.1| unnamed protein product [Podospora anserina S mat+]
Length = 248
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 109 PSAKDRALGL----GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
P+ R GL G + VP LPP+ LFV+ LP D + E+ IF F G++E
Sbjct: 144 PTKNARGAGLKSTGAGAAAVVPDEYLPPN--RILFVQNLPDDFGKDELTGIFSRFEGFRE 201
Query: 162 VRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFYQ 214
VR V PG + FV++ + A A TA + G + + V YQ
Sbjct: 202 VRTV------PGRSG--IAFVEYDAEAGAITAKENTAGMALKNGEKTMKVTYQ 246
>gi|403213912|emb|CCK68414.1| hypothetical protein KNAG_0A07610 [Kazachstania naganishii CBS
8797]
Length = 867
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 739 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSTRG----FAFVEFLLPKEAE 794
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 795 DAMDQLQG 802
>gi|402579243|gb|EJW73195.1| hypothetical protein WUBG_15898, partial [Wuchereria bancrofti]
Length = 419
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDAEIA 98
Query: 194 MDALQ 198
M ALQ
Sbjct: 99 MKALQ 103
>gi|62857647|ref|NP_001016784.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|60618430|gb|AAH90598.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
gi|89273875|emb|CAJ82017.1| small nuclear ribonucleoprotein polypeptide A [Xenopus (Silurana)
tropicalis]
Length = 282
Score = 43.1 bits (100), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A ++LQG QSN + +S
Sbjct: 255 VQAGAARESLQGFKITQSNSMKIS 278
>gi|186507399|ref|NP_001118504.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255001|gb|AEC10095.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 289
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 100
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 101 AVAVMHALNG 110
>gi|380012874|ref|XP_003690499.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Apis florea]
Length = 902
Score = 43.1 bits (100), Expect = 0.086, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ E+ IF+ KEVR+V+ + H G L +V+F+ AA A+
Sbjct: 755 LFVKGLPVSTTKEELEEIFKVHGALKEVRIVTYRNGHSKG----LAYVEFMDENSAAKAL 810
Query: 195 DALQG 199
A G
Sbjct: 811 LATDG 815
>gi|145361708|ref|NP_850366.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|62321263|dbj|BAD94469.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|110739960|dbj|BAF01884.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254999|gb|AEC10093.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 292
Score = 43.1 bits (100), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 100
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 101 AVAVMHALNG 110
>gi|47028317|gb|AAT09091.1| small nuclear ribonucleoprotein [Bigelowiella natans]
Length = 227
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 40 SYYTRDDDRGA---LRGMRDTDSLGA----SYDRY---LRSAQISSYSGGQSARHMSGGM 89
++ DD GA +RGM++ D G SY + + S + SY + + SG M
Sbjct: 56 AWIVFDDLSGATKSVRGMQNVDFFGKKMRLSYAKEKSDIISKRDGSYVPREKRKMNSGDM 115
Query: 90 PSRP-VDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRRE 148
P V V + P A+ E PP+ LF LP +++
Sbjct: 116 KIEPKVQKTTAVATAKGEGAP-----AMETDEPEEEDSSPPN--KILFARNLPPQATKKM 168
Query: 149 VAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ +F+ + G+KEVRLV G P I F++F +A A + LQ
Sbjct: 169 LETLFKQYDGFKEVRLVD-------GKPDI-AFIEFNDAQESALAKEGLQN 211
>gi|148222234|ref|NP_001080089.1| U1 small nuclear ribonucleoprotein A [Xenopus laevis]
gi|27924189|gb|AAH44979.1| Snf protein [Xenopus laevis]
Length = 282
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A ++LQG QSN + +S
Sbjct: 255 VQAGAARESLQGFKITQSNSMKIS 278
>gi|346473641|gb|AEO36665.1| hypothetical protein [Amblyomma maculatum]
Length = 183
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 106 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFENE 155
Query: 188 AHAATAMDALQG 199
++ A +ALQG
Sbjct: 156 IQSSAAKEALQG 167
>gi|170583984|ref|XP_001896809.1| RNA binding protein [Brugia malayi]
gi|158595852|gb|EDP34335.1| RNA binding protein, putative [Brugia malayi]
Length = 367
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDAEIA 98
Query: 194 MDALQ 198
M ALQ
Sbjct: 99 MKALQ 103
>gi|1173326|sp|P45429.1|SNRPA_XENLA RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
A; Short=U1-A; Short=U1A
gi|65181|emb|CAA41021.1| U1 A protein [Xenopus laevis]
Length = 282
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A ++LQG QSN + +S
Sbjct: 255 VQAGAARESLQGFKITQSNSMKIS 278
>gi|432890232|ref|XP_004075429.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1
[Oryzias latipes]
gi|432890234|ref|XP_004075430.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 2
[Oryzias latipes]
Length = 272
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 195 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 244
Query: 188 AHAATAMDALQG 199
A A D+LQG
Sbjct: 245 VQAGAARDSLQG 256
>gi|255711664|ref|XP_002552115.1| KLTH0B07546p [Lachancea thermotolerans]
gi|238933493|emb|CAR21677.1| KLTH0B07546p [Lachancea thermotolerans CBS 6340]
Length = 639
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + E+ +F G++ + +K + G P +CFV+F AHA
Sbjct: 521 NTLYVGNLPPDATEHELRQLFSTQKGFRRLSFRNKNTNGNGHGP--MCFVEFEDVAHATR 578
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 579 ALAELYGR 586
>gi|28207150|gb|AAO37215.1| hypothetical protein [Arabidopsis thaliana]
Length = 277
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 85
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 86 AVAVMHALNG 95
>gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 43.1 bits (100), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 28/93 (30%)
Query: 1 MADGYWRYSDARQPQSALPSLVSKRPRTDYD--VPSGHELSS------------------ 40
MADGYW + ++ Q P KRPR+D+D PS E+++
Sbjct: 1 MADGYW---NQQRQQHHPPGGPMKRPRSDFDSYAPSLLEINNACRLVEAPSSTMTIGHGG 57
Query: 41 -YYTRDDDRGALRGMRDTDSLGASYDRYLRSAQ 72
YY RD+D + DT ++G++YDRYL+S Q
Sbjct: 58 GYYPRDEDLD----VPDTRTIGSAYDRYLQSVQ 86
>gi|159164270|pdb|2DO4|A Chain A, Solution Structure Of The Rna Binding Domain Of Squamous
Cell Carcinoma Antigen Recognized By T Cells 3
Length = 100
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 20 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 75
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 76 MKMDGMTIKENII 88
>gi|344229622|gb|EGV61507.1| hypothetical protein CANTEDRAFT_94398 [Candida tenuis ATCC 10573]
Length = 526
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 119 GGGRSEVP-------LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVR 163
GG R +VP +PP A+ +TL+V LP D + +E+ +F P G++ +
Sbjct: 378 GGARKDVPDLSLLARVPPPANPADQNPPCNTLYVGNLPPDATEQELRALFSPQKGFRRLS 437
Query: 164 LVSKESRHPGG--DPLILCFVDFVSPAHAATAMDALQG 199
+K + G + +CFV+F AHA A+ L G
Sbjct: 438 FRTKANASGSGSNNHGPMCFVEFEDVAHATRALAELYG 475
>gi|422294869|gb|EKU22169.1| U2 small nuclear ribonucleoprotein B'', partial [Nannochloropsis
gaditana CCMP526]
Length = 289
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 9/70 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ SS L + LP++C+ +A +FR F G+ E+RL + + F++F
Sbjct: 213 EVSSMLMAQELPTECTEEMLAVLFRRFAGFHEIRLAGQRG---------IAFIEFRDEVS 263
Query: 190 AATAMDALQG 199
A TA A G
Sbjct: 264 ARTAFQAYNG 273
>gi|124507237|ref|XP_001352215.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
gi|23505245|emb|CAD52025.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
falciparum 3D7]
Length = 193
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 9/66 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TL V+ LP + ++ + +F + G+ EVR + PG + + FVDF + HA +
Sbjct: 122 TLLVQNLPDEINKNALEILFNQYPGFYEVRYI------PGKN---IAFVDFTAQEHAEIS 172
Query: 194 MDALQG 199
M LQ
Sbjct: 173 MTGLQN 178
>gi|335301350|ref|XP_001926720.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sus scrofa]
Length = 959
Score = 42.7 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C+R E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 799 LFISGLPFSCTREELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 854
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 855 LKMDGMTVKENII 867
>gi|145331097|ref|NP_001078040.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|110737249|dbj|BAF00572.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330255000|gb|AEC10094.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 302
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 47 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 100
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 101 AVAVMHALNG 110
>gi|2673920|gb|AAB88654.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 158
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 85
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 86 AVAVMHALNG 95
>gi|28207154|gb|AAO37217.1| hypothetical protein [Arabidopsis thaliana]
gi|61742673|gb|AAX55157.1| hypothetical protein At2g42245 [Arabidopsis thaliana]
Length = 287
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D TLFV GLP D RE+ ++FR F GY+ L S + P F F
Sbjct: 32 DEVRTLFVAGLPEDVKPREIYNLFREFPGYETSHLRSSDGAKP------FAFAVFSDLQS 85
Query: 190 AATAMDALQG 199
A M AL G
Sbjct: 86 AVAVMHALNG 95
>gi|396465284|ref|XP_003837250.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
gi|312213808|emb|CBX93810.1| hypothetical protein LEMA_P034840.1 [Leptosphaeria maculans JN3]
Length = 184
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D + ++F F G+KEVRLVS S + F +F + A
Sbjct: 108 NKTLFLQNIPRDVDEETLTNVFERFEGFKEVRLVSVRS---------VAFAEFENEQFAI 158
Query: 192 TAMDA 196
TA +A
Sbjct: 159 TAKEA 163
>gi|313231398|emb|CBY08513.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH---PGGDPL-ILCFVDFVSPAH 189
TLFV GLP D RE +F+ F G+ E +V + R+ P PL + F+ F S
Sbjct: 45 TLFVSGLPQDVKEREFYLLFQGFSGF-ECAIVKQPVRNVKLPNNQPLGPVAFLTFASRKD 103
Query: 190 AATAMDALQGQSNIICLSNLVVFYQIA 216
A TA D G + + NLV+ + A
Sbjct: 104 AETAKDKFHGFALDPQVDNLVMKIEFA 130
>gi|840821|emb|CAA44751.1| U2-snRNP-specific b'' [Mus musculus]
Length = 97
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 11/84 (13%)
Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
G +VP PP+ LF+ LP + + ++ + F G+KEVRLV RH
Sbjct: 8 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLLNQFPGFKEVRLVP--GRHD--- 60
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + A A DALQG
Sbjct: 61 ---IAFVEFENDGQAGAARDALQG 81
>gi|449525690|ref|XP_004169849.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like, partial
[Cucumis sativus]
Length = 306
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 10/80 (12%)
Query: 125 VPLPPDASS-----TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
+PL P +S TLF+ GLP D RE+ ++FR F GY+ L R P
Sbjct: 55 LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHL-----RTPTQTTQPF 109
Query: 180 CFVDFVSPAHAATAMDALQG 199
F F A AM A+ G
Sbjct: 110 AFAVFSDQQSAVGAMHAVNG 129
>gi|157139408|ref|XP_001647574.1| RNA binding motif protein [Aedes aegypti]
gi|108865819|gb|EAT32242.1| AAEL015645-PA [Aedes aegypti]
Length = 263
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 100 VGIGGMDPGPSAKDRALGLGG---GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
V I G S DR L GR L + + V +P + +E+ +F+ F
Sbjct: 87 VHIDGRKVELSRSDRTLNTEADTHGRKASKLKKQTGTKILVRNVPFQANAKEIRDLFKVF 146
Query: 157 VGYKEVRL-----VSKESRHPGGDPLILCFVDFVSPAHAATAMDAL 197
K VRL S + H G CFVDFV+ A A +AL
Sbjct: 147 GELKSVRLPRKMVSSADESHRG-----FCFVDFVTENDAKQAFEAL 187
>gi|410977027|ref|XP_003994914.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Felis catus]
Length = 964
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ S + A+ A
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYESESQASQAV 859
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 860 LKMDGMTVKENVI 872
>gi|326929748|ref|XP_003211018.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Meleagris gallopavo]
Length = 899
Score = 42.7 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V+F + A A+ A
Sbjct: 739 LFISGLPFSCTKEELEDICKAHGNVKDIRLVTNRAGKPKG----LAYVEFENEAQASQAV 794
Query: 194 --MDALQGQSNII 204
MD L + ++I
Sbjct: 795 LKMDGLTIKEHVI 807
>gi|449476847|ref|XP_002193793.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Taeniopygia guttata]
Length = 928
Score = 42.7 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ + + K++RLV+ + P G L +V++ S A A+ A
Sbjct: 768 LFISGLPFSCTKEELEEVCKAHGNVKDIRLVTNRAGKPKG----LAYVEYESEAQASQAV 823
Query: 194 --MDALQGQSNII 204
MD L + ++I
Sbjct: 824 LKMDGLTMKDHVI 836
>gi|256066562|ref|XP_002570569.1| hypothetical protein [Schistosoma mansoni]
gi|360043573|emb|CCD78986.1| hypothetical protein Smp_181270.2 [Schistosoma mansoni]
Length = 529
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR F GY L K + G + FV F S A A
Sbjct: 92 TLFVSGLPLDAKPRELYLLFRSFKGYLSSTL--KPAGKNGKLTAPVGFVTFESREQAEEA 149
Query: 194 MDALQG 199
M LQG
Sbjct: 150 MSKLQG 155
>gi|339255862|ref|XP_003370674.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316965776|gb|EFV50450.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 220
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 21/145 (14%)
Query: 64 YDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGR- 122
YD+ +R S S + + G RP + R + G K R + R
Sbjct: 76 YDKPMRIQYAKSESDAVAK--LKGTYVERPKEHQRNADLTG--ESKKEKKRRIAAEKARL 131
Query: 123 --SE------VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG 174
SE V P + LF LP + + + +F F G+KEVRLV +RH
Sbjct: 132 RASEGTNYVSVESNPPPNKILFCTNLPEEATEHMLQMLFNQFPGFKEVRLVP--NRHD-- 187
Query: 175 DPLILCFVDFVSPAHAATAMDALQG 199
+ FV+F + + TA D LQ
Sbjct: 188 ----IAFVEFDNEYQSKTARDTLQN 208
>gi|410977029|ref|XP_003994915.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Felis catus]
Length = 928
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ S + A+ A
Sbjct: 768 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYESESQASQAV 823
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 824 LKMDGMTVKENVI 836
>gi|290562822|gb|ADD38806.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
L G + P + LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 127 ALAGANAVHPGEAPPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVP--NRHD---- 180
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV+F + +A A +LQG
Sbjct: 181 --IAFVEFENEVQSAAARGSLQG 201
>gi|194379396|dbj|BAG63664.1| unnamed protein product [Homo sapiens]
Length = 527
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 367 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 422
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 423 MKMDGMTIKENII 435
>gi|119618222|gb|EAW97816.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_a [Homo sapiens]
Length = 575
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 415 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 470
Query: 194 --MDALQGQSNIICLS 207
MD + + NII ++
Sbjct: 471 MKMDGMTIKENIIKVA 486
>gi|169589|gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
Length = 231
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ ++ LF++ LP + + + +F+ + G++EVR++ + PG + FV+F
Sbjct: 154 EPNNILFIQNLPHETTSMMLEVLFKQYPGFREVRMIEAK---PG-----IAFVEFDDDVQ 205
Query: 190 AATAMDALQG 199
++ AM ALQG
Sbjct: 206 SSVAMQALQG 215
>gi|350425556|ref|XP_003494159.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus impatiens]
Length = 914
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVR+V+ + H G L +V+FV A A+
Sbjct: 771 LFVKGLPVSTTKEDLEEIFKVHGSLKEVRIVTYRNGHSKG----LAYVEFVDENSAGKAL 826
Query: 195 DALQG 199
A+ G
Sbjct: 827 LAIDG 831
>gi|449279242|gb|EMC86877.1| Squamous cell carcinoma antigen recognized by T-cells 3, partial
[Columba livia]
Length = 875
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ + + K++RLV+ + P G L +V+F + A A+ A
Sbjct: 715 LFISGLPFSCTKEELEEVCKAHGNVKDIRLVTNRAGKPKG----LAYVEFENEAQASQAV 770
Query: 194 --MDALQGQSNII 204
MD L + ++I
Sbjct: 771 LKMDGLTVKEHVI 783
>gi|156849149|ref|XP_001647455.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
gi|156118141|gb|EDO19597.1| hypothetical protein Kpol_1018p135 [Vanderwaltozyma polyspora DSM
70294]
Length = 863
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R+++ +F F K VR+ K + G F++F+ P A
Sbjct: 737 SGKIIVKNLPFEATRKDIFDLFSSFGQLKSVRVPKKFDKSARG----FAFIEFLLPKEAE 792
Query: 192 TAMDALQG 199
AMD LQG
Sbjct: 793 NAMDQLQG 800
>gi|66806007|ref|XP_636725.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
gi|74996697|sp|Q54J05.1|RU2B_DICDI RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|60465122|gb|EAL63221.1| U2 small nuclear ribonucleoprotein B [Dictyostelium discoideum AX4]
Length = 241
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ TLFVE LP C ++ +F F G+KEV +V ES+ + F++F
Sbjct: 164 PPN--KTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMV--ESKKG------IAFIEFEDE 213
Query: 188 AHAATAMDALQ 198
+ AM LQ
Sbjct: 214 IKSGFAMTNLQ 224
>gi|348528531|ref|XP_003451770.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Oreochromis niloticus]
Length = 948
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C++ ++A I + KEVRLV+ S P G L +V+F A+ A+
Sbjct: 786 IFISGLPFSCTKEQLAEICKNHGTVKEVRLVTYRSGKPKG----LAYVEFADETQASQAV 841
Query: 195 DALQG 199
L G
Sbjct: 842 LKLDG 846
>gi|313225840|emb|CBY07314.1| unnamed protein product [Oikopleura dioica]
Length = 335
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIF---------RPFVGYKEVRLVSKESRHPGGDPL 177
+P D S +FV GLP+ + ++ F + + ++KE++ P GD
Sbjct: 153 MPTDCSDCVFVSGLPNTVRKENISMFFSTAGQIMIDKKTQNERIFLFLNKETKQPVGD-- 210
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
C V + P+HAA A++ L G
Sbjct: 211 --CTVTYQDPSHAAAAIEMLNG 230
>gi|313221201|emb|CBY32024.1| unnamed protein product [Oikopleura dioica]
Length = 335
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIF---------RPFVGYKEVRLVSKESRHPGGDPL 177
+P D S +FV GLP+ + ++ F + + ++KE++ P GD
Sbjct: 153 MPTDCSDCVFVSGLPNTVRKENISMFFSTAGQIMIDKKTQNERIFLFLNKETKQPVGD-- 210
Query: 178 ILCFVDFVSPAHAATAMDALQG 199
C V + P+HAA A++ L G
Sbjct: 211 --CTVTYQDPSHAAAAIEMLNG 230
>gi|297843490|ref|XP_002889626.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
gi|297335468|gb|EFH65885.1| hypothetical protein ARALYDRAFT_887900 [Arabidopsis lyrata subsp.
lyrata]
Length = 243
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 156 MPPN--NILFIHNLPIEMTSMMLQLLFEQYTGFKEIRMIEAK---PG-----IAFVEYED 205
Query: 187 PAHAATAMDALQGQSNIICLSNLVVFYQIACEYISDKICV 226
++ AM ALQG + SN +F C+ + ++ +
Sbjct: 206 DVQSSMAMQALQGFQDHSTESNGRLF----CQEVKTRVLL 241
>gi|225442319|ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
gi|297743102|emb|CBI35969.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP STLF+ L C+ E+ + + G+ +++ +K GG P+ F DF
Sbjct: 186 LPP--CSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAK-----GGMPV--AFADFEE 236
Query: 187 PAHAATAMDALQG 199
A AMDALQG
Sbjct: 237 IEQANKAMDALQG 249
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKPREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFFNHQTAVA 75
Query: 193 AMDALQG 199
A+ AL G
Sbjct: 76 ALHALNG 82
>gi|367045436|ref|XP_003653098.1| hypothetical protein THITE_2115135 [Thielavia terrestris NRRL 8126]
gi|347000360|gb|AEO66762.1| hypothetical protein THITE_2115135 [Thielavia terrestris NRRL 8126]
Length = 248
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 30/125 (24%)
Query: 91 SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP---LPPDASSTLFVEGLPSDCSRR 147
+RP + R G+ GP+A VP LPP+ LFV+ LP D +
Sbjct: 142 ARPAKNARGAGLKATGAGPAAV------------VPDEYLPPN--RILFVQNLPDDFDKD 187
Query: 148 EVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMD-----ALQGQSN 202
+ IF F G++EVR V PG + FV++ + A A TA + AL+G
Sbjct: 188 ALTAIFGHFEGFREVRTV------PGRSG--IAFVEYETEAGAITAKENTAGMALKGGEK 239
Query: 203 IICLS 207
I+ ++
Sbjct: 240 IMKVT 244
>gi|432105098|gb|ELK31467.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Myotis
davidii]
Length = 1010
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ S + A+ A
Sbjct: 850 LFISGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYESESQASQAV 905
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 906 MKMDGMTIKENVI 918
>gi|50307487|ref|XP_453723.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690224|sp|Q6CQR6.1|MRD1_KLULA RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49642857|emb|CAH00819.1| KLLA0D14949p [Kluyveromyces lactis]
Length = 878
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R++V +F F K VR+ K + G FV+F+ P A AM
Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 809
Query: 195 DALQG 199
D LQG
Sbjct: 810 DQLQG 814
>gi|449447844|ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
sativus]
Length = 262
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLF+ GLP D RE+ ++FR G+ +L ++ G ++ F F + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 193 AMDALQG 199
A+ AL G
Sbjct: 81 ALHALNG 87
>gi|156120369|ref|NP_001095330.1| squamous cell carcinoma antigen recognized by T-cells 3 [Bos
taurus]
gi|154425531|gb|AAI51266.1| SART3 protein [Bos taurus]
Length = 957
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I R K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFVSGLPFSCTKEELEEICRAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 LKMDGMTIRENVI 871
>gi|340728933|ref|XP_003402766.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Bombus terrestris]
Length = 914
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVR+V+ + H G L +V+FV A A+
Sbjct: 771 LFVKGLPVTTTKEDLEEIFKVHGSLKEVRIVTYRNGHSKG----LAYVEFVDENSAGKAL 826
Query: 195 DALQG 199
A+ G
Sbjct: 827 LAIDG 831
>gi|444317805|ref|XP_004179560.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
gi|387512601|emb|CCH60041.1| hypothetical protein TBLA_0C02300 [Tetrapisispora blattae CBS 6284]
Length = 868
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R+++ +F F K VR+ K + G FV+F+ P A AM
Sbjct: 743 IIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 798
Query: 195 DALQG 199
D LQG
Sbjct: 799 DQLQG 803
>gi|449480586|ref|XP_004155937.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Cucumis sativus]
Length = 262
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLF+ GLP D RE+ ++FR G+ +L ++ G ++ F F + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 193 AMDALQG 199
A+ AL G
Sbjct: 81 ALHALNG 87
>gi|325184774|emb|CCA19265.1| premRNA branch site protein p14 putative [Albugo laibachii Nc14]
Length = 122
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLI 178
G R LPP+ + L+V LP S E+ IF + +++RL V+ E+R
Sbjct: 5 GRRGNARLPPEVNRVLYVRNLPFKISSEEMYDIFGKYGAIRQIRLGVNNETRGT------ 58
Query: 179 LCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
FV + A A+D L G + +C L+V Y
Sbjct: 59 -AFVIYEDIYDAKNAVDHLSGFN--VCGRYLIVLY 90
>gi|452003034|gb|EMD95491.1| hypothetical protein COCHEDRAFT_1200551 [Cochliobolus
heterostrophus C5]
Length = 244
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D ++ IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDDLTSIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|367008274|ref|XP_003678637.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
gi|359746294|emb|CCE89426.1| hypothetical protein TDEL_0A00940 [Torulaspora delbrueckii]
Length = 682
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ H+F G++ + +K S G P +CFV+F + A
Sbjct: 553 NTLYVGNLPPDTTEQELRHLFSGQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDVSFATR 610
Query: 193 AMDALQG 199
A+ L G
Sbjct: 611 ALAELYG 617
>gi|356495478|ref|XP_003516604.1| PREDICTED: uncharacterized protein LOC100799471 [Glycine max]
Length = 332
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++FR F Y+ L R P F F S A A
Sbjct: 74 TLFVAGLPEDVKPREIYNLFREFPDYESSHL-----RSPSNSSQPFAFAVFASQQSAIMA 128
Query: 194 MDALQG 199
AL G
Sbjct: 129 KHALNG 134
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 122 RSEVPLPPDASS---TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
+S P P S+ TLFV L S C+ +E+ +F + G+ ++++ S G P
Sbjct: 230 KSSTPYVPQNSTPCATLFVANLGSSCNEQELIQVFSRYPGFLKLKMQSTY-----GAP-- 282
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FVDF + A+++LQG
Sbjct: 283 VAFVDFQDVGSSTDALNSLQG 303
>gi|321460285|gb|EFX71329.1| sans fille-like protein [Daphnia pulex]
Length = 227
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 150 PPN--QILFLTNLPEETNEMMLSMLFTQFPGFKEVRLVP--GRHD------IAFVEFENE 199
Query: 188 AHAATAMDALQG 199
+A A ++LQG
Sbjct: 200 VQSAGARESLQG 211
>gi|6325369|ref|NP_015437.1| Mrd1p [Saccharomyces cerevisiae S288c]
gi|74676381|sp|Q06106.1|MRD1_YEAST RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|914983|gb|AAB68082.1| Ypr112cp [Saccharomyces cerevisiae]
gi|285815635|tpg|DAA11527.1| TPA: Mrd1p [Saccharomyces cerevisiae S288c]
gi|392296115|gb|EIW07218.1| Mrd1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 887
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|401623161|gb|EJS41268.1| mrd1p [Saccharomyces arboricola H-6]
Length = 886
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 761 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 816
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 817 NAMDQLHG 824
>gi|349581915|dbj|GAA27072.1| K7_Mrd1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 887
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|323350239|gb|EGA84386.1| Mrd1p [Saccharomyces cerevisiae VL3]
Length = 887
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|207340299|gb|EDZ68693.1| YPR112Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256269058|gb|EEU04395.1| Mrd1p [Saccharomyces cerevisiae JAY291]
Length = 887
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|190408039|gb|EDV11304.1| multiple RNA-binding domain-containing protein 1 [Saccharomyces
cerevisiae RM11-1a]
Length = 887
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|151942889|gb|EDN61235.1| multiple RNA-binding domain containing protein [Saccharomyces
cerevisiae YJM789]
Length = 887
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 818 NAMDQLHG 825
>gi|302307467|ref|NP_984131.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|442570228|sp|Q75A83.2|MRD1_ASHGO RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|299789015|gb|AAS51955.2| ADR035Cp [Ashbya gossypii ATCC 10895]
gi|374107347|gb|AEY96255.1| FADR035Cp [Ashbya gossypii FDAG1]
Length = 838
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
V+ LP + +R++V +F F K VR+ K + G FV+F+ P+ A AMD
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPSEAENAMDQ 771
Query: 197 LQG 199
LQG
Sbjct: 772 LQG 774
>gi|70933887|ref|XP_738251.1| small nuclear ribonucleoprotein (snRNP) [Plasmodium chabaudi
chabaudi]
gi|56514315|emb|CAH82541.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
chabaudi chabaudi]
Length = 107
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP + ++ + +F + G+ EVR + PG + + F+DF S + A
Sbjct: 36 TLFVQNLPDEINKNALEILFNQYPGFSEVRYI------PGRN---VAFIDFNSYQNGEVA 86
Query: 194 MDALQ 198
M+ LQ
Sbjct: 87 MNGLQ 91
>gi|242247219|ref|NP_001156146.1| U1 small nuclear ribonucleoprotein A-like [Acyrthosiphon pisum]
gi|239790514|dbj|BAH71814.1| ACYPI003668 [Acyrthosiphon pisum]
Length = 224
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
G+ GG VP P + LF+ LP + + ++ +F F G+KEVRLV +RH
Sbjct: 137 GVSGG--NVPEQP-PNQILFLTNLPDETTEMMLSMLFNQFPGFKEVRLVP--NRHD---- 187
Query: 177 LILCFVDFVSPAHAATAMDALQG 199
+ FV+F + + TA +L G
Sbjct: 188 --IAFVEFENEHQSNTAKLSLNG 208
>gi|451856476|gb|EMD69767.1| hypothetical protein COCSADRAFT_155918 [Cochliobolus sativus
ND90Pr]
Length = 244
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D ++ IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDDLTTIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|225434417|ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
gi|297745807|emb|CBI15863.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Query: 129 PDAS--STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
P+A+ + LF++ LP + + +F+ + G++EVR++ + PG + FV+F
Sbjct: 154 PEAAPNNILFIQNLPHQTTSMMLQVLFQQYPGFREVRMIEAK---PG-----IAFVEFED 205
Query: 187 PAHAATAMDALQG 199
++ AM+ALQG
Sbjct: 206 DVQSSMAMEALQG 218
>gi|221106406|ref|XP_002160322.1| PREDICTED: pre-mRNA branch site protein p14-like [Hydra
magnipapillata]
Length = 123
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILC 180
R+ V LPP+ + L++ LP S E+ IF + ++VRL V++E+R
Sbjct: 6 RTNVRLPPEVNRILYIRNLPYKISAEELYDIFGKYGAIRQVRLGVTQETRGTA------- 58
Query: 181 FVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
+V + A A D L G + +C L+V Y
Sbjct: 59 YVVYEDIFDAKNACDHLSGFN--VCNRYLIVLY 89
>gi|384251055|gb|EIE24533.1| U1 small nuclear ribonucleo protein A [Coccomyxa subellipsoidea
C-169]
Length = 224
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+ LP + + +A +F+ + GY E R+V E+R PG + FV+F A AM
Sbjct: 152 LFVQNLPEETTSAMLALLFQQYAGYIETRMV--EAR-PG-----IAFVEFEDEDKATVAM 203
Query: 195 DALQG 199
LQG
Sbjct: 204 AGLQG 208
>gi|367015674|ref|XP_003682336.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
gi|359749998|emb|CCE93125.1| hypothetical protein TDEL_0F03140 [Torulaspora delbrueckii]
Length = 855
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R+++ +F F K VR+ K + G FV+F+ P A AM
Sbjct: 730 IIVKNLPFEATRKDIFELFSSFGHLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 785
Query: 195 DALQG 199
D LQG
Sbjct: 786 DQLQG 790
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPG-GDPLILCFVDFVSPA 188
+A++TLFV GLP + + +E+ + F PF K V LV R P + CFV++ + A
Sbjct: 96 NANNTLFVSGLPKEVTEQEIVYEFNPFGRVKTVNLV----RDPKTNEQRSYCFVEYETEA 151
Query: 189 HAATAMD 195
A++
Sbjct: 152 GFRNALN 158
>gi|68066442|ref|XP_675204.1| small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56494251|emb|CAH97133.1| small nuclear ribonucleoprotein (snRNP), putative [Plasmodium
berghei]
Length = 192
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP + ++ + +F + G+ EVR + PG + + F+DF S + A
Sbjct: 121 TLFVQNLPDEINKNALEILFNQYPGFSEVRYI------PGRN---VAFIDFNSYQNGEVA 171
Query: 194 MDALQ 198
M+ LQ
Sbjct: 172 MNGLQ 176
>gi|363814370|ref|NP_001242824.1| uncharacterized protein LOC100810989 [Glycine max]
gi|255636681|gb|ACU18677.1| unknown [Glycine max]
Length = 265
Score = 41.6 bits (96), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLF+ L +C+ E+ F + G+ V++ S+ GG P + FVDF AA
Sbjct: 183 STLFIANLGPNCTEDELKQAFSVYTGFNMVKMRSR-----GGMP--VAFVDFEETDQAAK 235
Query: 193 AMDALQG 199
++ LQG
Sbjct: 236 VVEELQG 242
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 22 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 76
Query: 193 AMDALQG 199
A+ AL G
Sbjct: 77 ALHALNG 83
>gi|410923104|ref|XP_003975022.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Takifugu rubripes]
Length = 933
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C+++++ + + ++VRLV+ S P G L +V+F HA+ A+
Sbjct: 776 IFISGLPFSCTKKQLEEVCSSYGTIRDVRLVTYRSGKPKG----LAYVEFAEETHASQAV 831
Query: 195 DALQG 199
+ G
Sbjct: 832 LKMDG 836
>gi|365757846|gb|EHM99718.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 879
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 754 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 809
Query: 192 TAMDALQG 199
AMD L G
Sbjct: 810 NAMDQLHG 817
>gi|307136276|gb|ADN34103.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 113
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLF+ GLP D RE+ ++FR G+ +L ++ G ++ F F + A T
Sbjct: 26 NTLFISGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRGNQVVAFATFYNHQSAVT 80
Query: 193 AMDALQG 199
A+ AL G
Sbjct: 81 ALHALNG 87
>gi|82914978|ref|XP_728920.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485600|gb|EAA20485.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 189
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV+ LP + ++ + +F + G+ EVR + PG + + F+DF S + A
Sbjct: 121 TLFVQNLPDEINKNALEILFNQYPGFSEVRYI------PGRN---VAFIDFNSYQNGEVA 171
Query: 194 MDALQ 198
M+ LQ
Sbjct: 172 MNGLQ 176
>gi|242093984|ref|XP_002437482.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
gi|241915705|gb|EER88849.1| hypothetical protein SORBIDRAFT_10g027920 [Sorghum bicolor]
Length = 310
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY L + +S
Sbjct: 50 RAEQALPARDELRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQ------AYA 103
Query: 181 FVDFVSPAHAATAMDALQG 199
F F A TA+ G
Sbjct: 104 FAVFADQQSALTALSGTNG 122
>gi|348679843|gb|EGZ19659.1| hypothetical protein PHYSODRAFT_312714 [Phytophthora sojae]
Length = 124
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 10/110 (9%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLI 178
G R LPP+ + L+V LP S E+ IF + +++RL V+ ++R
Sbjct: 7 GRRGNARLPPEVNRVLYVRNLPFKISSEELYDIFGKYGAIRQIRLGVNNDTRGT------ 60
Query: 179 LCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFYQIACEYISDKICVHI 228
FV + A A+D L G + +C L+V Y A + K V +
Sbjct: 61 -AFVVYEDIYDAKNAVDHLSGFN--VCGRYLIVLYYQANKMQQRKAAVDL 107
>gi|342321005|gb|EGU12943.1| RNA binding protein [Rhodotorula glutinis ATCC 204091]
Length = 298
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LFV+ LP D ++ + +FRPF EVR + PG + FV+F
Sbjct: 208 LPPN--KILFVQNLPDDTTKEGLEALFRPFPNLVEVRTI------PGRKN--IAFVEFAD 257
Query: 187 PAHAATAMDAL 197
+ A DAL
Sbjct: 258 EQSSGVARDAL 268
>gi|346326538|gb|EGX96134.1| RNA binding protein [Cordyceps militaris CM01]
Length = 444
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 83 RHMSGGMP-SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDAS--------S 133
++S G+P R P++ GG PG S G S P PP A+ +
Sbjct: 218 NNVSQGIPFGRRATAPQLPINGGAGPGNSVTHMNFNHPPG-SHHPRPPPANPADQNPPCN 276
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TL+V LPSD S E+ +F GYK + +K S P +CFV+F + A A
Sbjct: 277 TLYVGNLPSDTSEEELKAMFSKQRGYKRLCFRTK-SNGP------MCFVEFEDVSFATKA 329
Query: 194 MDALQGQ 200
+ L G
Sbjct: 330 LHELYGH 336
>gi|357125294|ref|XP_003564329.1| PREDICTED: uncharacterized protein LOC100840294 isoform 1
[Brachypodium distachyon]
Length = 302
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+S V +PP STLF+E L C+ E+ +F G+ +++ R GG P F
Sbjct: 211 KSSVDIPP--CSTLFIENLGQTCTEEELEEVFSKQPGFHVLKM-----RRRGGMP--AAF 261
Query: 182 VDFVSPAHAATAMDALQG 199
DF + AM+ LQG
Sbjct: 262 ADFTDIESSTAAMNNLQG 279
>gi|19075417|ref|NP_587917.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe 972h-]
gi|26399672|sp|O74452.1|SCW1_SCHPO RecName: Full=Cell wall integrity protein scw1; AltName:
Full=Strong cell wall protein 1
gi|3560261|emb|CAA20746.1| RNA-binding protein Scw1 [Schizosaccharomyces pombe]
Length = 561
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+T++V LP S E+ +F VGYK + +K G P +CFV+F + +A
Sbjct: 426 NTIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTK-----GNGP--MCFVEFENIPYAME 478
Query: 193 AMDALQGQSNIICLSNLV 210
A+ LQG +CLS+ +
Sbjct: 479 ALKNLQG----VCLSSSI 492
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
G ++ DRA G +VP P S TLF+ L D R + IF F VR+ +
Sbjct: 231 GGASNDRAKKFG----DVPSEP--SDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTH 284
Query: 168 -ESRHPGGDPLILCFVDFVSPAHAATAMDALQGQS 201
E+ P G +V + + A A+DALQG+S
Sbjct: 285 PETEQPKG----FGYVQYTNTEDAKKALDALQGES 315
>gi|194697902|gb|ACF83035.1| unknown [Zea mays]
gi|413934630|gb|AFW69181.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 306
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY L + +S
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRTGKSSQ------AYA 99
Query: 181 FVDFVSPAHAATAMDALQG 199
F F A A+ A G
Sbjct: 100 FAVFADQQSALAALSATNG 118
>gi|212723796|ref|NP_001132012.1| uncharacterized protein LOC100193418 [Zea mays]
gi|194693198|gb|ACF80683.1| unknown [Zea mays]
gi|413934627|gb|AFW69178.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
gi|413934628|gb|AFW69179.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 203
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY L + G
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGYVSSHLRT------GKSSQAYA 99
Query: 181 FVDFVSPAHAATAMDALQG 199
F F A A+ A G
Sbjct: 100 FAVFADQQSALAALSATNG 118
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 9/92 (9%)
Query: 109 PSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
P A RA G RS S+TLF+ L DC+ + +F Y V VS
Sbjct: 330 PDANARANKFGDKRSA------PSNTLFIGNLSFDCTNETIQEVF---AEYGNVTRVSLP 380
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
+ G +VDF S A A++ALQGQ
Sbjct: 381 TDRDSGALKGFGYVDFGSQEEATAALEALQGQ 412
>gi|73994825|ref|XP_864427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Canis lupus familiaris]
Length = 964
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 859
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 860 LKMDGMTIKENVI 872
>gi|358332433|dbj|GAA51094.1| protein couch potato, partial [Clonorchis sinensis]
Length = 413
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+FV GLP D RE+ +FR F GY+ L K + G + FV F S A A
Sbjct: 83 TIFVSGLPLDAKPRELYLLFRGFKGYQSSTL--KPAGKNGKPTAPVGFVTFDSREQAEDA 140
Query: 194 MDALQG 199
M LQG
Sbjct: 141 MRKLQG 146
>gi|213403304|ref|XP_002172424.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
gi|212000471|gb|EEB06131.1| multiple RNA-binding domain-containing protein [Schizosaccharomyces
japonicus yFS275]
Length = 804
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 128 PPDA-SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG-DPLILCFVDFV 185
P D +STLFV+ + S+ + IF G+ + +K S+ PG + FV+F
Sbjct: 580 PADGETSTLFVKNISFSTSQTDFQRIFASLNGFLSAVIRAKPSKRPGQLMSMGFGFVEFR 639
Query: 186 SPAHAATAMDALQG 199
S A TAM+A+QG
Sbjct: 640 SKEDAVTAMNAMQG 653
>gi|321476727|gb|EFX87687.1| hypothetical protein DAPPUDRAFT_306569 [Daphnia pulex]
Length = 845
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK---ESRHPGGDPLILCFVDFVSPA 188
SS L V +P + + +EV +F+PF K VRL K H G F+DF++
Sbjct: 727 SSKLLVRNIPFEATTKEVTELFKPFGELKAVRLPKKMAGNQSHRG-----FAFIDFITKQ 781
Query: 189 HAATAMDALQGQSNI 203
A A ++L +++
Sbjct: 782 DAKRAFESLSASTHL 796
>gi|198434778|ref|XP_002132163.1| PREDICTED: similar to GH24608 isoform 1 [Ciona intestinalis]
Length = 216
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + +F F G+KEVRLV RH + FV+F
Sbjct: 139 PPN--HILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVP--GRHD------IAFVEFEGE 188
Query: 188 AHAATAMDALQG 199
A+ A ALQG
Sbjct: 189 QQASEAKGALQG 200
>gi|237840841|ref|XP_002369718.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|95007435|emb|CAJ20656.1| Rnp (Rrm rna binding domain) containing protein, putative
[Toxoplasma gondii RH]
gi|211967382|gb|EEB02578.1| U2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482936|gb|EEE21267.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
GT1]
gi|221503274|gb|EEE28972.1| u2 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
VEG]
Length = 233
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
+LF+E LP ++ + +F + G+ E RL+ E R + FVDF + A AA A
Sbjct: 161 SLFIENLPPKATKTSLDILFGQYRGHTESRLI--EGRG-------VAFVDFSTQAQAAVA 211
Query: 194 MDALQG 199
M +QG
Sbjct: 212 MQGMQG 217
>gi|320591314|gb|EFX03753.1| U1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 236
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 11/73 (15%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ TLFV+ LP DC + IF + G++EVRLV PG L FV++ +
Sbjct: 157 LPPN--KTLFVQNLPEDCDADVLTGIFGRYEGFREVRLV------PGRR---LAFVEYDA 205
Query: 187 PAHAATAMDALQG 199
A TA + G
Sbjct: 206 EPGAITAKENTAG 218
>gi|168036913|ref|XP_001770950.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677814|gb|EDQ64280.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ TLF+ GLP D RE+ ++FR F GY+ +L + G I+ F F A
Sbjct: 13 EEVKTLFLSGLPDDIKEREIYNLFRNFEGYESCQL-----KFSGRGFQIVAFAVFTDQAT 67
Query: 190 AATAMDALQG 199
A A + L G
Sbjct: 68 ALKAKEELNG 77
>gi|357125296|ref|XP_003564330.1| PREDICTED: uncharacterized protein LOC100840294 isoform 2
[Brachypodium distachyon]
Length = 261
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
+S V +PP STLF+E L C+ E+ +F G+ +++ R GG P F
Sbjct: 170 KSSVDIPP--CSTLFIENLGQTCTEEELEEVFSKQPGFHVLKM-----RRRGGMP--AAF 220
Query: 182 VDFVSPAHAATAMDALQG 199
DF + AM+ LQG
Sbjct: 221 ADFTDIESSTAAMNNLQG 238
>gi|355717861|gb|AES06077.1| squamous cell carcinoma antigen recognized by T cells 3 [Mustela
putorius furo]
Length = 958
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 799 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 854
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 855 LKMDGMTIKENVI 867
>gi|330933232|ref|XP_003304096.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
gi|311319509|gb|EFQ87793.1| hypothetical protein PTT_16533 [Pyrenophora teres f. teres 0-1]
Length = 244
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D + IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDTLTTIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|194214206|ref|XP_001916628.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Equus caballus]
Length = 962
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 859
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 860 LKMDGMTIKENVI 872
>gi|313238053|emb|CBY13172.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ ++T++VE LP + + + +F F G+K+ R + P G FV+F P
Sbjct: 127 EPAATIYVENLPDEANESMLNLLFSQFPGFKKSRPI------PAGGK---AFVEFADPGA 177
Query: 190 AATAMDALQG 199
A +A DALQG
Sbjct: 178 ATSAKDALQG 187
>gi|444723163|gb|ELW63824.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Tupaia
chinensis]
Length = 1050
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C+R E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 890 LFISGLPFSCTREELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 945
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 946 MKMDGMTIKENVI 958
>gi|198434776|ref|XP_002132167.1| PREDICTED: similar to GH24608 isoform 2 [Ciona intestinalis]
Length = 220
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + +F F G+KEVRLV RH + FV+F
Sbjct: 143 PPN--HILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVP--GRHD------IAFVEFEGE 192
Query: 188 AHAATAMDALQG 199
A+ A ALQG
Sbjct: 193 QQASEAKGALQG 204
>gi|189205961|ref|XP_001939315.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187975408|gb|EDU42034.1| U2 small nuclear ribonucleoprotein B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 244
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ TLF++ +P D + IF F G+KEVRLVS + + F +F + A
Sbjct: 168 NKTLFLQNIPRDVDEDTLTAIFERFEGFKEVRLVSVRA---------VAFAEFENEQFAI 218
Query: 192 TAMDA 196
TA +A
Sbjct: 219 TAKEA 223
>gi|301771702|ref|XP_002921271.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3-like [Ailuropoda melanoleuca]
Length = 964
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 859
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 860 LKMDGMTIKENVI 872
>gi|377835922|ref|XP_003688944.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 12/77 (15%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KE LV PG L + FV+F + A A+
Sbjct: 212 LFLTNLPEETNELMLSMLFTQFRGFKEAGLV------PGR--LDIAFVEFDNEVQAGAAL 263
Query: 195 DALQG----QSNIICLS 207
DALQG Q+N + +S
Sbjct: 264 DALQGFKITQNNAMKIS 280
>gi|85000071|ref|XP_954754.1| U1 snRNP protein [Theileria annulata strain Ankara]
gi|65302900|emb|CAI75278.1| U1 snRNP protein, putative [Theileria annulata]
Length = 346
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 12/72 (16%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFVE LP + S +V ++F G+ E +L++ S+H + F+DF + ++
Sbjct: 250 TLFVENLPDNISHNDVNNLFHNMPGFVETKLIA--SKH-------VAFIDFDNEFNSNY- 299
Query: 194 MDALQGQSNIIC 205
+LQG NII
Sbjct: 300 --SLQGNFNIIL 309
>gi|351698640|gb|EHB01559.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Heterocephalus glaber]
Length = 924
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + KE+RLV+ + P G L +V++ + + A+ A
Sbjct: 764 LFISGLPFSCTKEELEDICKAHGTVKELRLVTNRAGKPKG----LAYVEYENESQASQAV 819
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 820 MKMDGMTIKENVI 832
>gi|363739959|ref|XP_415181.3| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Gallus gallus]
Length = 915
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + A A+ A
Sbjct: 755 LFISGLPFSCTKEELEDICKAHGNVKDIRLVTNRAGKPKG----LAYVEYENEAQASQAV 810
Query: 194 --MDALQGQSNII 204
MD L + ++I
Sbjct: 811 LKMDGLTIKEHVI 823
>gi|339260634|ref|XP_003368308.1| protein couch potato [Trichinella spiralis]
gi|316959609|gb|EFV47705.1| protein couch potato [Trichinella spiralis]
Length = 155
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L + P + FV F S A A A
Sbjct: 3 TLFVSGLPIDAKPRELYLLFRAYKGYESSLLKVTQKNGKATTP--IGFVTFNSRAAAEEA 60
Query: 194 MDALQG 199
+LQG
Sbjct: 61 KQSLQG 66
>gi|323450983|gb|EGB06862.1| hypothetical protein AURANDRAFT_28680 [Aureococcus anophagefferens]
Length = 214
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S+ LF + LP DC+ ++ +F+ + G+KEVR+V PG + FV+F A+
Sbjct: 139 SNVLFAQDLPDDCNDMMLSILFQQYGGFKEVRMV------PGKKG--IAFVEFADETQAS 190
Query: 192 TAMDAL 197
A+ L
Sbjct: 191 LALQGL 196
>gi|190344482|gb|EDK36163.2| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 121 GRSEVP-------LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
GR +VP +PP A+ +TL+V LP D + E+ +F P G++ +
Sbjct: 429 GRKDVPDLSLLARVPPPANPADQNPPCNTLYVGNLPPDATEAELRALFSPQKGFRRLSFR 488
Query: 166 SKESRHPGGDPLI------LCFVDFVSPAHAATAMDALQGQS 201
+K G +CFV+F AHA A+ L G++
Sbjct: 489 TKNQSSAGPSSATSHNHGPMCFVEFEDVAHATRALAELYGRA 530
>gi|309266585|ref|XP_003086803.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 282
Score = 40.8 bits (94), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEVRLV RH + FV+F +
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFTQFPGFKEVRLVP--GRH------DIDFVEFDNE 254
Query: 188 AHAATAMDALQG----QSNIICLS 207
A A D LQG Q+N + +S
Sbjct: 255 VQAGAARDVLQGFKITQNNAMKIS 278
>gi|195133350|ref|XP_002011102.1| GI16192 [Drosophila mojavensis]
gi|193907077|gb|EDW05944.1| GI16192 [Drosophila mojavensis]
Length = 919
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G R +V + + V +P EV IF+ F +RL K + PG D
Sbjct: 773 GARRRQVAQKKQTGTKILVRNIPFQAHHHEVRDIFKAFGELTSLRLPKKMT--PGEDSHR 830
Query: 179 -LCFVDFVSPAHAATAMDALQGQSNI 203
CFVD+ + A A A DAL +++
Sbjct: 831 GFCFVDYTTKADAKRAFDALSASTHL 856
>gi|21593001|gb|AAM64950.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
Length = 232
Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF++ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 154 MPPN--NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAK---PG-----IAFVEYED 203
Query: 187 PAHAATAMDALQG 199
A+ AM LQG
Sbjct: 204 DVQASIAMQPLQG 216
>gi|339251724|ref|XP_003372884.1| protein couch potato [Trichinella spiralis]
gi|316968731|gb|EFV52966.1| protein couch potato [Trichinella spiralis]
Length = 355
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K ++ G + FV F S A A A
Sbjct: 67 TLFVSGLPIDAKPRELYLLFRAYKGYESSLL--KVTQKNGKATTPIGFVTFNSRAAAEEA 124
Query: 194 MDALQG 199
+LQG
Sbjct: 125 KQSLQG 130
>gi|194763797|ref|XP_001964019.1| GF20948 [Drosophila ananassae]
gi|190618944|gb|EDV34468.1| GF20948 [Drosophila ananassae]
Length = 857
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ +FV L C++ E+ +F PF K+VRLV K ++ G + +V+F PA A
Sbjct: 683 TNKIFVRNLYPACTKEELQELFSPFGNIKDVRLVHKLNKQLKG----IAYVEFELPAEAQ 738
Query: 192 TAMDALQG 199
A+ G
Sbjct: 739 KAVAGRDG 746
>gi|156088599|ref|XP_001611706.1| U2 small nuclear ribonucleoprotein B' [Babesia bovis T2Bo]
gi|154798960|gb|EDO08138.1| U2 small nuclear ribonucleoprotein B', putative [Babesia bovis]
Length = 213
Score = 40.8 bits (94), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFVE L D ++ V +F+ + GYK+ R V + + FVDF + A
Sbjct: 138 TLFVENLHPDMNKMSVELLFQQYPGYKDTRFVEGK---------CVAFVDFATAYQGEVA 188
Query: 194 MDALQGQS 201
+ LQG S
Sbjct: 189 LQGLQGFS 196
>gi|255716874|ref|XP_002554718.1| KLTH0F11968p [Lachancea thermotolerans]
gi|238936101|emb|CAR24281.1| KLTH0F11968p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
+S + V+ LP + R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 749 SSGKIVVKNLPFEAERKQVFELFSSFGQLKSVRVPKKFDKSTRG----FAFVEFLLPKEA 804
Query: 191 ATAMDALQG 199
AM+ LQG
Sbjct: 805 ENAMEQLQG 813
>gi|123485368|ref|XP_001324476.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121907359|gb|EAY12253.1| conserved hypothetical protein [Trichomonas vaginalis G3]
Length = 576
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 132 SSTLFVEGLPSDCSRR-EVAHIFRPFVGYKEVRLVSK--ESRHPGGDPLILCFVDFVSPA 188
++TL V+ LP +++ E+A F+ K +R+ K E H G CF+DF +
Sbjct: 474 TTTLIVKNLPFTVTKKSEIAEAFKHVGNIKAIRMTKKRNEQGHRG-----FCFIDFTTRQ 528
Query: 189 HAATAMDALQ 198
A A DA+Q
Sbjct: 529 AAQAAFDAMQ 538
>gi|297826425|ref|XP_002881095.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
gi|297326934|gb|EFH57354.1| hypothetical protein ARALYDRAFT_320780 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF++ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 154 MPPN--NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAK---PG-----IAFVEYED 203
Query: 187 PAHAATAMDALQG 199
A+ AM LQG
Sbjct: 204 DVQASIAMQPLQG 216
>gi|224084380|ref|XP_002307278.1| predicted protein [Populus trichocarpa]
gi|222856727|gb|EEE94274.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D LFV GLP D E+ +FR F GY+ L R P + F F
Sbjct: 8 DQVRILFVAGLPDDIKPSEIYSLFREFPGYESSHL-----RSPSQNSQPFAFATFADQPS 62
Query: 190 AATAMDALQG 199
A AM AL G
Sbjct: 63 AVAAMHALNG 72
>gi|15227729|ref|NP_180585.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
gi|75318049|sp|O22922.1|RU2B1_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B''; Short=U2
snRNP B''
gi|2347192|gb|AAC16931.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|27765024|gb|AAO23633.1| At2g30260 [Arabidopsis thaliana]
gi|110743428|dbj|BAE99600.1| putative small nuclear ribonucleoprotein U2B [Arabidopsis thaliana]
gi|330253269|gb|AEC08363.1| U2 small nuclear ribonucleoprotein B'' [Arabidopsis thaliana]
Length = 232
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF++ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 154 MPPN--NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAK---PG-----IAFVEYED 203
Query: 187 PAHAATAMDALQG 199
A+ AM LQG
Sbjct: 204 DVQASIAMQPLQG 216
>gi|312086378|ref|XP_003145052.1| hypothetical protein LOAG_09478 [Loa loa]
Length = 396
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDADIA 98
Query: 194 MDALQ 198
M LQ
Sbjct: 99 MKTLQ 103
>gi|63592914|ref|XP_356179.3| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform 1 [Mus
musculus]
Length = 281
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 209 LFLTNLPEETNELMLSMLFTQFPGFKEVRLVP--GRH------DIDFVEFDNEVQAGAAR 260
Query: 195 DALQG----QSNIICLS 207
D LQG Q+N + +S
Sbjct: 261 DVLQGFKITQNNAMKIS 277
>gi|148689095|gb|EDL21042.1| mCG15722 [Mus musculus]
Length = 281
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRLV RH + FV+F + A A
Sbjct: 209 LFLTNLPEETNELMLSMLFTQFPGFKEVRLVP--GRH------DIDFVEFDNEVQAGAAR 260
Query: 195 DALQG----QSNIICLS 207
D LQG Q+N + +S
Sbjct: 261 DVLQGFKITQNNAMKIS 277
>gi|321469536|gb|EFX80516.1| hypothetical protein DAPPUDRAFT_23478 [Daphnia pulex]
Length = 270
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ +L K + G + FV F + A A A
Sbjct: 4 TLFVSGLPMDAKPRELYLLFRAYDGYENSQL--KVTSKNGKTTSPVGFVTFATRASAEGA 61
Query: 194 MDALQG 199
LQG
Sbjct: 62 KQDLQG 67
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S +E+ +F F GY +R+ +K GG P + FV++ AA
Sbjct: 186 STLFVANLGQFVSEQELKELFGSFPGYCRLRMHNK-----GGAP--VAFVEYADVRCAAQ 238
Query: 193 AMDALQG 199
A+ +LQG
Sbjct: 239 ALISLQG 245
>gi|158261441|dbj|BAF82898.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 40.8 bits (94), Expect = 0.48, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 859 MKMDGMTIKENII 871
>gi|397525223|ref|XP_003832576.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Pan paniscus]
Length = 963
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 859 MKMDGMTIKENII 871
>gi|401396957|ref|XP_003879947.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
gi|325114355|emb|CBZ49912.1| hypothetical protein NCLIV_003960 [Neospora caninum Liverpool]
Length = 234
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
+LF+E LP ++ + +F + G+ E RL+ E R + FVDF + A AA A
Sbjct: 162 SLFIENLPPKATKTSLDILFGQYRGHTESRLI--EGRG-------VAFVDFSTQAQAAVA 212
Query: 194 MDALQG 199
M +QG
Sbjct: 213 MQGMQG 218
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P + GG R D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPRGR-----YGGSRDR-----DLPTSLLVRNLRHDCRQEDLRRPFEQF 60
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVF 212
K++ L + GDP F+ +V PA AA A + G S+++ VVF
Sbjct: 61 GPVKDIYLPRD---YYTGDPRGFGFIQYVDPADAAEAKHHMDG-SHLLGRELTVVF 112
>gi|114646770|ref|XP_001163755.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 3 [Pan troglodytes]
gi|410209428|gb|JAA01933.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410253528|gb|JAA14731.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410290636|gb|JAA23918.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
gi|410350455|gb|JAA41831.1| squamous cell carcinoma antigen recognized by T cells 3 [Pan
troglodytes]
Length = 963
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 859 MKMDGMTIKENII 871
>gi|8954049|gb|AAF82223.1|AC067971_31 Strong similarity to a small nuclear ribonucleoprotein U2B'' -
potato from Solanum tuberosum gb|M72892. It contains an
RNA recognition motif PF|00076. ESTs gb|AA041158 and
gb|AI992475 come from this gene [Arabidopsis thaliana]
Length = 247
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 169 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 218
Query: 187 PAHAATAMDALQG 199
++ AM ALQG
Sbjct: 219 DVQSSMAMQALQG 231
>gi|7661952|ref|NP_055521.1| squamous cell carcinoma antigen recognized by T-cells 3 [Homo
sapiens]
gi|74762140|sp|Q15020.1|SART3_HUMAN RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=hSART-3; AltName:
Full=Tat-interacting protein of 110 kDa; Short=Tip110
gi|961450|dbj|BAA09929.1| KIAA0156 [Homo sapiens]
gi|4996282|dbj|BAA78384.1| squamous cell carcinoma antigen SART-3 [Homo sapiens]
gi|62739971|gb|AAH93784.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|85567456|gb|AAI11984.1| Squamous cell carcinoma antigen recognized by T cells 3 [Homo
sapiens]
gi|119618223|gb|EAW97817.1| squamous cell carcinoma antigen recognised by T cells 3, isoform
CRA_b [Homo sapiens]
gi|168278527|dbj|BAG11143.1| squamous cell carcinoma antigen recognized by T-cells 3 [synthetic
construct]
Length = 963
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 859 MKMDGMTIKENII 871
>gi|301106042|ref|XP_002902104.1| pre-mRNA branch site protein p14, putative [Phytophthora infestans
T30-4]
gi|262098724|gb|EEY56776.1| pre-mRNA branch site protein p14, putative [Phytophthora infestans
T30-4]
Length = 162
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 115 ALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPG 173
+ + G R LPP+ + L+V LP S E+ IF + +++RL V+ ++R
Sbjct: 40 VMSVQGRRGNARLPPEVNRVLYVRNLPFKISSEELYDIFGKYGAIRQIRLGVNNDTRGTA 99
Query: 174 GDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
FV + A A+D L G + +C L+V Y
Sbjct: 100 -------FVVYEDIYDAKNAVDHLSGFN--VCGRYLIVLY 130
>gi|426374017|ref|XP_004053879.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Gorilla gorilla gorilla]
Length = 963
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 859 MKMDGMTIKENII 871
>gi|82542283|gb|ABB82038.1| RNP4F [Drosophila melanogaster]
Length = 260
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ +FV L CS+ E+ +F PF K+VRLV K ++ G + +V+F P A
Sbjct: 183 NKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQR 238
Query: 193 AMDALQG 199
A+ G
Sbjct: 239 AVAGRDG 245
>gi|255553401|ref|XP_002517742.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
gi|223543140|gb|EEF44674.1| small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus
communis]
Length = 233
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
G R E P ++ LF++ LP + + + +F+ + G++EVR++ + PG +
Sbjct: 147 GNRGEQEAAP-PNNILFIQNLPHETTSMMLQVLFQQYPGFREVRMIEAK---PG-----I 197
Query: 180 CFVDFVSPAHAATAMDALQ 198
FV+F ++ AM ALQ
Sbjct: 198 AFVEFEDDVQSSMAMQALQ 216
>gi|393910177|gb|EFO19018.2| hypothetical protein LOAG_09478 [Loa loa]
Length = 395
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D +RE+ +FR GY+ L +S+ GG + FV F S A A
Sbjct: 40 TLFVSGLPMDAKQRELYLLFRSCRGYENSLLRITQSKD-GGIASPVGFVTFSSAEDADIA 98
Query: 194 MDALQ 198
M LQ
Sbjct: 99 MKTLQ 103
>gi|219520657|gb|AAI43254.1| SART3 protein [Homo sapiens]
Length = 927
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 822
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 823 MKMDGMTIKENII 835
>gi|397525225|ref|XP_003832577.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Pan paniscus]
Length = 927
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 822
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 823 MKMDGMTIKENII 835
>gi|344257423|gb|EGW13527.1| U2 small nuclear ribonucleoprotein B'' [Cricetulus griseus]
Length = 113
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEV L+ RH + FV+F + A A
Sbjct: 41 LFLNNLPEETNEMMLSMLFNQFPGFKEVCLIP--GRHD------IAFVEFENDGQAGAAR 92
Query: 195 DALQG 199
DALQG
Sbjct: 93 DALQG 97
>gi|114646772|ref|XP_001163651.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Pan troglodytes]
Length = 927
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 822
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 823 MKMDGMTIKENII 835
>gi|426374019|ref|XP_004053880.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Gorilla gorilla gorilla]
Length = 927
Score = 40.4 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 822
Query: 194 --MDALQGQSNII 204
MD + + NII
Sbjct: 823 MKMDGMTIKENII 835
>gi|405952772|gb|EKC20544.1| Protein couch potato [Crassostrea gigas]
Length = 318
Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S +E+ +F F G+ +R+ +K GG P+ FV+F AA
Sbjct: 217 STLFVANLGQFSSEQELKDLFNSFQGFSRLRMHNK-----GGSPV--AFVEFQDVRQAAE 269
Query: 193 AMDALQG 199
AM LQG
Sbjct: 270 AMGRLQG 276
>gi|443682493|gb|ELT87074.1| hypothetical protein CAPTEDRAFT_222846 [Capitella teleta]
Length = 841
Score = 40.4 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP R V +IF+ + K+VRLV+ + G L +V+FVS + AA A+
Sbjct: 699 LFVKGLPRTTGRDAVENIFKQYGAIKDVRLVTYRNGVSKG----LAYVEFVSESEAAQAV 754
>gi|363752183|ref|XP_003646308.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889943|gb|AET39491.1| hypothetical protein Ecym_4446 [Eremothecium cymbalariae
DBVPG#7215]
Length = 855
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+ V+ LP + +R+++ +F F K VR+ K + G FV+F+ P A AM
Sbjct: 731 IIVKNLPFEATRKDIFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 786
Query: 195 DALQG 199
D L+G
Sbjct: 787 DQLEG 791
>gi|30679892|ref|NP_850936.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75329133|sp|Q8H1S6.1|RU2B2_ARATH RecName: Full=U2 small nuclear ribonucleoprotein B'' 2; Short=U2
snRNP B'' 2
gi|23296313|gb|AAN13038.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
gi|332189937|gb|AEE28058.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 229
Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 151 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 200
Query: 187 PAHAATAMDALQG 199
++ AM ALQG
Sbjct: 201 DVQSSMAMQALQG 213
>gi|156837691|ref|XP_001642865.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156113441|gb|EDO15007.1| hypothetical protein Kpol_400p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 600
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K S G P +CFV+F + A
Sbjct: 459 NTLYVGNLPPDATEQELRQLFSSQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDASFATV 516
Query: 193 AMDALQG 199
A+ L G
Sbjct: 517 ALAELYG 523
>gi|30679897|ref|NP_172177.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189938|gb|AEE28059.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 228
Score = 40.4 bits (93), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 150 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 199
Query: 187 PAHAATAMDALQG 199
++ AM ALQG
Sbjct: 200 DVQSSMAMQALQG 212
>gi|383858263|ref|XP_003704621.1| PREDICTED: protein couch potato-like [Megachile rotundata]
Length = 334
Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 219 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 271
Query: 193 AMDALQG 199
AM LQG
Sbjct: 272 AMATLQG 278
>gi|417405453|gb|JAA49437.1| Putative rna-binding protein sart3 rrm superfamily [Desmodus
rotundus]
Length = 963
Score = 40.4 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIKENVI 871
>gi|444708342|gb|ELW49419.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
gi|444708343|gb|ELW49420.1| U2 small nuclear ribonucleoprotein B'' [Tupaia chinensis]
Length = 130
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KEVRL RH FV+F + A A
Sbjct: 75 LFLNNLPEETNEMMLSMLFNQFPGFKEVRLAP--GRHDS------AFVEFENDGQAGAAG 126
Query: 195 DALQ 198
DALQ
Sbjct: 127 DALQ 130
>gi|224034387|gb|ACN36269.1| unknown [Zea mays]
gi|413944623|gb|AFW77272.1| hypothetical protein ZEAMMB73_456532 [Zea mays]
Length = 254
Score = 40.4 bits (93), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG R +P ++ LFV+ LP + + + +F + G+KEVR++ + PG
Sbjct: 166 GGQRVMMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMIEAK---PG----- 217
Query: 179 LCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
+ FV++ A AM+ LQ I + +V+ Y
Sbjct: 218 IAFVEYGDETQATAAMNNLQS-FKITKENQMVITY 251
>gi|19347861|gb|AAL85989.1| putative spliceosomal protein (U2B) [Arabidopsis thaliana]
Length = 228
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 150 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 199
Query: 187 PAHAATAMDALQG 199
++ AM ALQG
Sbjct: 200 DVQSSMAMQALQG 212
>gi|145323766|ref|NP_001077472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189939|gb|AEE28060.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 200
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP+ + LF+ LP + + + +F + G+KE+R++ + PG + FV++
Sbjct: 122 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 171
Query: 187 PAHAATAMDALQG 199
++ AM ALQG
Sbjct: 172 DVQSSMAMQALQG 184
>gi|413934629|gb|AFW69180.1| hypothetical protein ZEAMMB73_553458 [Zea mays]
Length = 208
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
R+E LP D TLF+ GLP+D REV ++FR F GY VS R G
Sbjct: 46 RAEQALPARDEVRTLFIAGLPADAKPREVYNLFRDFPGY-----VSSHLR-TGKSSQAYA 99
Query: 181 FVDFVSPAHAATAMDALQG 199
F F A A+ A G
Sbjct: 100 FAVFADQQSALAALSATNG 118
>gi|428671090|gb|EKX72009.1| U1 snRNP protein, putative [Babesia equi]
Length = 294
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 12/82 (14%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG S P+ P+ TLFVE LP + +V +F GY E R++ +
Sbjct: 212 GGFS-APVIPN--RTLFVESLPEGVTTNDVISLFCRMPGYIEARVIPARK---------V 259
Query: 180 CFVDFVSPAHAATAMDALQGQS 201
FVDF + ++ AM LQGQ+
Sbjct: 260 AFVDFDNDMNSGYAMQTLQGQT 281
>gi|426247439|ref|XP_004017493.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Ovis aries]
Length = 966
Score = 40.4 bits (93), Expect = 0.62, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 806 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENESEASQAV 861
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 862 LKMDGMTIRENVI 874
>gi|255953987|ref|XP_002567746.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589457|emb|CAP95601.1| Pc21g07040 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 249
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF+ LP D ++ ++ IF F G++EVRLV PG + FV++ +
Sbjct: 170 LPPN--KILFLRELPDDATQEGLSAIFGRFEGFQEVRLV------PGRKG--IAFVEYEA 219
Query: 187 PAHAATAMDALQG 199
A A +A +A G
Sbjct: 220 EAGAISAKEATSG 232
>gi|50288343|ref|XP_446600.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525908|emb|CAG59527.1| unnamed protein product [Candida glabrata]
Length = 674
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 101 GIGGMDPGPSAKDRALGLGGGRSEVPLPPDAS------STLFVEGLPSDCSRREVAHIFR 154
G+G + G S D +L ++VP P + + +TL+V LP D S +E+ +F
Sbjct: 525 GMGYSEKGMSQADLSL-----LAKVPPPANPADQNPPCNTLYVGNLPPDTSEQELRQLFS 579
Query: 155 PFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
P G++ + +K + +CFV+F + A A+ L G+
Sbjct: 580 PQPGFRRLSFKNKNNNGHTHGHGPMCFVEFEDVSFATRALAELYGR 625
>gi|325182719|emb|CCA17174.1| U1 small nuclear ribonucleoprotein A putative [Albugo laibachii
Nc14]
Length = 234
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 9/65 (13%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF++ LP C++ + +F + GYKEVR+V PG L FV+F + A+ A+
Sbjct: 163 LFLQDLPPSCNQDMLRVLFEQYHGYKEVRMV------PGKS---LAFVEFGDESQASVAL 213
Query: 195 DALQG 199
L G
Sbjct: 214 QGLYG 218
>gi|380018457|ref|XP_003693144.1| PREDICTED: protein couch potato-like [Apis florea]
Length = 331
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 278
Query: 193 AMDALQG 199
AM LQG
Sbjct: 279 AMATLQG 285
>gi|307184926|gb|EFN71193.1| Protein couch potato [Camponotus floridanus]
Length = 358
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 195 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 247
Query: 193 AMDALQG 199
AM LQG
Sbjct: 248 AMATLQG 254
>gi|255637677|gb|ACU19162.1| unknown [Glycine max]
Length = 189
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQSAMA 75
Query: 193 AMDALQG 199
A+ AL G
Sbjct: 76 ALHALNG 82
>gi|391337372|ref|XP_003743043.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
B''-like [Metaseiulus occidentalis]
Length = 212
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+A LF+ GLP + + + +F F G+KEVRL+ G P I FV++
Sbjct: 135 PPNA--ILFLTGLPEETNDMMLQMLFGQFPGFKEVRLIP-------GRPDI-AFVEYEDE 184
Query: 188 AHAATAMDALQG 199
A + A + LQG
Sbjct: 185 AQSTAAKNGLQG 196
>gi|328789046|ref|XP_392443.4| PREDICTED: protein couch potato-like [Apis mellifera]
gi|350408751|ref|XP_003488500.1| PREDICTED: protein couch potato-like [Bombus impatiens]
Length = 326
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 226 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 278
Query: 193 AMDALQG 199
AM LQG
Sbjct: 279 AMATLQG 285
>gi|340716150|ref|XP_003396564.1| PREDICTED: protein couch potato-like [Bombus terrestris]
Length = 315
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 215 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 267
Query: 193 AMDALQG 199
AM LQG
Sbjct: 268 AMATLQG 274
>gi|403281745|ref|XP_003932338.1| PREDICTED: LOW QUALITY PROTEIN: squamous cell carcinoma antigen
recognized by T-cells 3 [Saimiri boliviensis
boliviensis]
Length = 972
Score = 40.4 bits (93), Expect = 0.66, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 812 LFISGLPFSCTKEELEEICKAHGNVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 867
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 868 MKMDGMTIKENVI 880
>gi|340960349|gb|EGS21530.1| hypothetical protein CTHT_0033900 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 250
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
GP K A G + LPP+ LFV+ LP D + + IF F G++EVR+V
Sbjct: 152 GPGLKSTAPGAAPVVPDEYLPPN--RILFVQNLPDDFDKDALTAIFGRFEGFREVRMV-- 207
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
PG + FV++ S A A TA + G
Sbjct: 208 ----PGRSG--IAFVEYESEAGAITAKENTAG 233
>gi|365762580|gb|EHN04114.1| Mrd1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 887
Score = 40.4 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
MD L G
Sbjct: 818 NVMDQLHG 825
>gi|259150262|emb|CAY87065.1| Mrd1p [Saccharomyces cerevisiae EC1118]
Length = 887
Score = 40.4 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ LP + +R++V +F F K VR+ K + G FV+F+ P A
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817
Query: 192 TAMDALQG 199
MD L G
Sbjct: 818 NVMDQLHG 825
>gi|242086969|ref|XP_002439317.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
gi|241944602|gb|EES17747.1| hypothetical protein SORBIDRAFT_09g004270 [Sorghum bicolor]
Length = 259
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 9/95 (9%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG R +P ++ LFV+ LP + + + +F + G+KEVR+V + PG
Sbjct: 171 GGQRVIMPEIIVPNNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG----- 222
Query: 179 LCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
+ FV++ A AM+ LQ I + +V+ Y
Sbjct: 223 IAFVEYGDEGQATAAMNNLQS-FKITKENQMVITY 256
>gi|146421882|ref|XP_001486884.1| hypothetical protein PGUG_00261 [Meyerozyma guilliermondii ATCC
6260]
Length = 589
Score = 40.4 bits (93), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 121 GRSEVP-------LPPDAS--------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 165
GR +VP +PP A+ +TL+V LP D + E+ +F P G++ +
Sbjct: 429 GRKDVPDLSLLARVPPPANPADQNPPCNTLYVGNLPPDATEAELRALFLPQKGFRRLSFR 488
Query: 166 SKESRHPGGDPLI------LCFVDFVSPAHAATAMDALQGQS 201
+K G +CFV+F AHA A+ L G++
Sbjct: 489 TKNQSSAGPSSATSHNHGPMCFVEFEDVAHATRALAELYGRA 530
>gi|449444859|ref|XP_004140191.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Cucumis
sativus]
gi|449480996|ref|XP_004156051.1| PREDICTED: pre-mRNA branch site p14-like protein-like [Cucumis
sativus]
Length = 125
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFV 185
LPP+ + LFV LP + + E+ IF + +++R+ +K++R FV +
Sbjct: 14 LPPEVNRVLFVRNLPFNITSEEMYDIFGKYGAIRQIRIGTNKDTRGT-------AFVVYE 66
Query: 186 SPAHAATAMDALQGQSNIICLSNLVVFYQIA 216
A TA+D L G N+ +V++YQ A
Sbjct: 67 DIYDAKTAVDHLSG-FNVANRYLIVLYYQQA 96
>gi|392597982|gb|EIW87304.1| RNA binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 263
Score = 40.0 bits (92), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP + + ++ +F + EVRL+ + + FV+FV
Sbjct: 185 LPPN--KILFLQNLPENVDKEQLTTLFTQYPNLHEVRLIPTKKD--------IAFVEFVD 234
Query: 187 PAHAATAMDALQG 199
A A A DAL
Sbjct: 235 EASAGVAKDALHN 247
>gi|194888671|ref|XP_001976954.1| GG18501 [Drosophila erecta]
gi|190648603|gb|EDV45881.1| GG18501 [Drosophila erecta]
Length = 896
Score = 40.0 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 16/122 (13%)
Query: 80 QSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDAS-STLFVE 138
Q+A+ + G S+P R + P A+ R S P+ + +FV
Sbjct: 685 QAAKAETSGGASQPASKAR----EPANAQPDAEAR-------ESNFKYSPNMEINKIFVR 733
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
L CS+ E+ +F PF K+VRLV K ++ G + +V+F P A A+
Sbjct: 734 NLHPACSKEELHELFSPFGSIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQRAVAGRD 789
Query: 199 GQ 200
G
Sbjct: 790 GH 791
>gi|345570654|gb|EGX53475.1| hypothetical protein AOL_s00006g341 [Arthrobotrys oligospora ATCC
24927]
Length = 255
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF++ LP + + + IF F G+KEVRLV PG + FV++ +
Sbjct: 175 LPPN--KILFLQNLPDNATSDILNGIFGSFEGFKEVRLV------PGRKG--IAFVEYEN 224
Query: 187 PAHAATAMDALQGQS 201
A A +A + QG S
Sbjct: 225 EAGAISAKENTQGMS 239
>gi|156845900|ref|XP_001645839.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156116508|gb|EDO17981.1| hypothetical protein Kpol_1054p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 683
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + E+ +F G++ + +K + G P +CFV+F + A
Sbjct: 562 NTLYVGNLPSDATEHELRQLFSSQPGFRRLSFRNKNTNGNGHGP--ICFVEFEDVSFATR 619
Query: 193 AMDALQG 199
A+ L G
Sbjct: 620 ALAELYG 626
>gi|428185283|gb|EKX54136.1| hypothetical protein GUITHDRAFT_100384 [Guillardia theta CCMP2712]
Length = 424
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
+LF+ G+P DC RE+ ++FR F G++ L H G +++ FV F +P A A
Sbjct: 136 SLFLSGIPYDCRAREIYNMFRLFPGFRYSTL------HRNG-KILVAFVTFETPDQAINA 188
Query: 194 MDALQG 199
+ G
Sbjct: 189 GRQVNG 194
>gi|115466456|ref|NP_001056827.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|55296621|dbj|BAD69323.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|55297274|dbj|BAD69059.1| RNA-binding protein-like [Oryza sativa Japonica Group]
gi|113594867|dbj|BAF18741.1| Os06g0151200 [Oryza sativa Japonica Group]
gi|215697009|dbj|BAG91003.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 300
Score = 40.0 bits (92), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F G+ L + G ++ FV FV+ A +A
Sbjct: 33 TLFVAGLPDDVKPREIHNLFSSRPGFDHCLL-----EYTGRGNQVVAFVSFVNHQAALSA 87
Query: 194 MDALQG 199
M AL G
Sbjct: 88 MSALNG 93
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP STLFV L C+ E+ + G+ +++ R GG P+ F DF
Sbjct: 214 IPP--CSTLFVANLGHSCTEEELKEVLSKQPGFHLLKM-----RRRGGMPV--AFADFTD 264
Query: 187 PAHAATAMDALQG 199
+ AMDALQG
Sbjct: 265 IESSTAAMDALQG 277
>gi|410075513|ref|XP_003955339.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
gi|372461921|emb|CCF56204.1| hypothetical protein KAFR_0A07700 [Kazachstania africana CBS 2517]
Length = 571
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K S G P +CFV+F + A
Sbjct: 442 NTLYVGNLPPDATEQELRQLFSKQQGFRRLSFKNKSSNGNGHGP--MCFVEFDDVSFATR 499
Query: 193 AMDALQG 199
A+ L G
Sbjct: 500 ALAELYG 506
>gi|345485970|ref|XP_001605039.2| PREDICTED: protein couch potato-like [Nasonia vitripennis]
Length = 327
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ FV++ +AA
Sbjct: 227 STLFVANLGQFVSEHELKEIFNSFPGFCRLRMHTK-----GGSPV--AFVEYQDVRYAAQ 279
Query: 193 AMDALQG 199
AM LQG
Sbjct: 280 AMATLQG 286
>gi|402887557|ref|XP_003907156.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Papio anubis]
Length = 963
Score = 40.0 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIKENVI 871
>gi|332241740|ref|XP_003270038.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Nomascus leucogenys]
Length = 963
Score = 40.0 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIKENVI 871
>gi|383873332|ref|NP_001244484.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|355692773|gb|EHH27376.1| hypothetical protein EGK_17559 [Macaca mulatta]
gi|355786497|gb|EHH66680.1| hypothetical protein EGM_03721 [Macaca fascicularis]
gi|380786253|gb|AFE65002.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
gi|384950574|gb|AFI38892.1| squamous cell carcinoma antigen recognized by T-cells 3 [Macaca
mulatta]
Length = 963
Score = 40.0 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIKENVI 871
>gi|366988651|ref|XP_003674093.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
gi|342299956|emb|CCC67712.1| hypothetical protein NCAS_0A11540 [Naumovozyma castellii CBS 4309]
Length = 869
Score = 40.0 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 140 LPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
LP + +R++V +F F K VR+ K + G FV+F+ P A AMD LQG
Sbjct: 749 LPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAMDQLQG 804
>gi|224134967|ref|XP_002327534.1| predicted protein [Populus trichocarpa]
gi|222836088|gb|EEE74509.1| predicted protein [Populus trichocarpa]
Length = 281
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ +IFR G+ +L ++ G ++ F F + A
Sbjct: 31 NTLFVSGLPDDVKAREIHNIFRRRPGFDSCQL-----KYTGRGNQVVAFATFFNHQSAIA 85
Query: 193 AMDALQG 199
A+ +L G
Sbjct: 86 ALHSLNG 92
>gi|291241724|ref|XP_002740760.1| PREDICTED: conserved hypothetical protein-like, partial
[Saccoglossus kowalevskii]
Length = 297
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L + + E+ +F G+ +RL +K GG P CFV+F + A+
Sbjct: 198 STLFVANLGTHTTEEELRELFGRIPGFSRLRLHNK-----GGAPC--CFVEFQNVVFASQ 250
Query: 193 AMDALQGQ 200
A++ +QGQ
Sbjct: 251 ALNQMQGQ 258
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K + G + + FV F + A A
Sbjct: 3 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLL--KVTGKQGKNTSPVGFVTFETRVGAEAA 60
Query: 194 MDALQG 199
ALQG
Sbjct: 61 KQALQG 66
>gi|367022286|ref|XP_003660428.1| hypothetical protein MYCTH_2314150 [Myceliophthora thermophila ATCC
42464]
gi|347007695|gb|AEO55183.1| hypothetical protein MYCTH_2314150 [Myceliophthora thermophila ATCC
42464]
Length = 247
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 17/98 (17%)
Query: 109 PSAKDRALGL----GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
P+ R GL GG + VP LPP+ LFV+ LP D + + IF F G++E
Sbjct: 143 PAKNARGAGLKSTGGGPAAVVPDEYLPPN--RILFVQNLPDDMDKDALTAIFGRFEGFRE 200
Query: 162 VRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VR V PG + FV++ + A A TA + G
Sbjct: 201 VRTV------PGRSG--IAFVEYEAEAGAITAKENTAG 230
>gi|217069866|gb|ACJ83293.1| unknown [Medicago truncatula]
Length = 211
Score = 40.0 bits (92), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G E P ++ LF+E LP + + R + +F + G+KEVRL+ + PG
Sbjct: 148 GSGAQEAAAP---NNILFIENLPYETTGRMLEMLFEQYPGFKEVRLIEAK---PG----- 196
Query: 179 LCFVDFVSPAHAATA 193
+ FVDF ++ A
Sbjct: 197 IAFVDFEDDGQSSMA 211
>gi|328783037|ref|XP_394225.4| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Apis mellifera]
Length = 910
Score = 40.0 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVR+V+ + H G L +++F AA A+
Sbjct: 760 LFVKGLPVSTTKEDLEEIFKVHGALKEVRIVTYRNGHSKG----LAYIEFKDENSAAKAL 815
Query: 195 DALQG 199
A G
Sbjct: 816 LATDG 820
>gi|197101013|ref|NP_001124858.1| squamous cell carcinoma antigen recognized by T-cells 3 [Pongo
abelii]
gi|75070943|sp|Q5REG1.1|SART3_PONAB RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3
gi|55726145|emb|CAH89846.1| hypothetical protein [Pongo abelii]
Length = 981
Score = 40.0 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 876
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 877 MKMDGMTIKENVI 889
>gi|402887559|ref|XP_003907157.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Papio anubis]
Length = 927
Score = 40.0 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 822
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 823 MKMDGMTIKENVI 835
>gi|156408498|ref|XP_001641893.1| predicted protein [Nematostella vectensis]
gi|156229034|gb|EDO49830.1| predicted protein [Nematostella vectensis]
Length = 97
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D REV +FR F GY E L+ + P + FV F + A+ A
Sbjct: 3 TLFVSGLPLDVKPREVYLLFRSFKGY-EGSLLKLTDKQP------VAFVTFENKDCASDA 55
Query: 194 MDALQG 199
LQG
Sbjct: 56 KSELQG 61
>gi|332241742|ref|XP_003270039.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Nomascus leucogenys]
Length = 927
Score = 40.0 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 767 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 822
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 823 MKMDGMTIKENVI 835
>gi|119568196|gb|EAW47811.1| hCG22524, isoform CRA_b [Homo sapiens]
Length = 174
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP + + ++ +F F G+KEV LV RH + FV+F +
Sbjct: 97 PPNY--ILFLNNLPEETNEMMLSMLFNQFPGFKEVCLVP--GRHD------IAFVEFEND 146
Query: 188 AHAATAMDALQG 199
A A DALQG
Sbjct: 147 GKAGAARDALQG 158
>gi|126324351|ref|XP_001376283.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Monodelphis domestica]
Length = 959
Score = 40.0 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 800 LFISGLPFSCTKEELEDICKVHGNVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 855
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 856 LKMDGMTIKQNVI 868
>gi|452825214|gb|EME32212.1| RNA-binding protein, putative [Galdieria sulphuraria]
Length = 333
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+A STLFV L ++ E+ ++F G++ VRL K+ R P + FV+F +
Sbjct: 194 NACSTLFVGNLSPSVTQAELENLFSRCTGFRRVRLNIKDERAP------VAFVEFTDSVY 247
Query: 190 AATAMDALQG 199
+ AM Q
Sbjct: 248 STQAMQQCQN 257
>gi|225435850|ref|XP_002262884.1| PREDICTED: pre-mRNA branch site p14-like protein [Vitis vinifera]
gi|147809527|emb|CAN62387.1| hypothetical protein VITISV_037629 [Vitis vinifera]
gi|147810953|emb|CAN67767.1| hypothetical protein VITISV_042768 [Vitis vinifera]
gi|296083881|emb|CBI24269.3| unnamed protein product [Vitis vinifera]
Length = 125
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFV 185
LPP+ + L+V LP + S E+ IF + +++R+ +K++R FV +
Sbjct: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGT-------AFVVYE 65
Query: 186 SPAHAATAMDALQGQSNIICLSNLVVFYQIA 216
A TA+D L G N+ +V++YQ A
Sbjct: 66 DIYDAKTAVDHLSG-FNVANRYLIVLYYQQA 95
>gi|74136059|ref|NP_001027962.1| nucleolin like protein CiRGG1 [Ciona intestinalis]
gi|6178156|dbj|BAA86200.1| nucleolin like protein CiRGG1 [Ciona intestinalis]
Length = 529
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS-KESRHPGGDPLILCFVDFVSPAHAAT 192
TLFV+ LP +A +F G KEVRL++ +ES P G + F++F S A T
Sbjct: 280 TLFVKNLPYSADENAIAELFD---GVKEVRLLTDRESGRPKG----MAFIEFDSTAEKET 332
Query: 193 AM---DALQGQSNIICLSNLV 210
A D L+ + L N+
Sbjct: 333 AFGLKDELEMDGRSLYLDNVT 353
>gi|192910926|gb|ACF06571.1| RNA binding protein [Elaeis guineensis]
Length = 124
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFV 185
LPP+ + L+V LP + S E+ IF + +++R+ +K++R FV +
Sbjct: 13 LPPEVNRVLYVRNLPFNISSEEMCDIFGKYGAIRQIRIGTNKDTRGT-------AFVVYE 65
Query: 186 SPAHAATAMDALQGQSNIICLSNLVVFYQIA 216
A TA+D L G N+ +V++YQ A
Sbjct: 66 DIYDAKTAVDHLSG-FNVANRYLIVLYYQQA 95
>gi|425772063|gb|EKV10488.1| U1 small nuclear ribonucleoprotein, putative [Penicillium digitatum
Pd1]
gi|425777240|gb|EKV15421.1| U1 small nuclear ribonucleoprotein, putative [Penicillium digitatum
PHI26]
Length = 249
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF+ LP D ++ ++ IF F G++EVRLV PG + FV++ +
Sbjct: 170 LPPN--KILFLRELPDDATQEGLSAIFGRFEGFQEVRLV------PGRKG--IAFVEYEA 219
Query: 187 PAHAATAMDALQG 199
A A +A +A G
Sbjct: 220 EAGAISAKEATSG 232
>gi|401825322|ref|XP_003886756.1| putative RNA-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392997912|gb|AFM97775.1| putative RNA-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 247
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV P S ++ IF PF K ++++ +P + V+F P +A AM
Sbjct: 5 LFVNNFPESYSEESMSLIFSPFGEIKSIKILR--------EPRLFSIVEFRDPQNAKAAM 56
Query: 195 DALQGQ 200
D+L G+
Sbjct: 57 DSLNGR 62
>gi|255580012|ref|XP_002530840.1| Pre-mRNA branch site protein p14, putative [Ricinus communis]
gi|223529604|gb|EEF31553.1| Pre-mRNA branch site protein p14, putative [Ricinus communis]
Length = 124
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFV 185
LPP+ + L+V LP + S E+ IF + +++R+ +K++R FV +
Sbjct: 13 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGT-------AFVVYE 65
Query: 186 SPAHAATAMDALQGQSNIICLSNLVVFYQIA 216
A TA+D L G N+ +V++YQ A
Sbjct: 66 DIYDAKTAVDHLSG-FNVANRYLIVLYYQQA 95
>gi|254572223|ref|XP_002493221.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
gi|238033019|emb|CAY71042.1| RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci
[Komagataella pastoris GS115]
Length = 497
Score = 40.0 bits (92), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES--RHPGGDPLILCFVDFVSPAHA 190
+TL+V LP D + E+ +F P G++ + +K S GG +CFV+F S A
Sbjct: 383 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 442
Query: 191 ATAMDALQGQS 201
A A+ L G S
Sbjct: 443 AEALANLYGTS 453
>gi|195476890|ref|XP_002100023.1| GE16818 [Drosophila yakuba]
gi|194187547|gb|EDX01131.1| GE16818 [Drosophila yakuba]
Length = 903
Score = 40.0 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 103 GGMDPGPSAKDRALGLGGG------RSEVPLPPDAS-STLFVEGLPSDCSRREVAHIFRP 155
GG P P++K R G S P+ + +FV L CS+ E+ +F P
Sbjct: 694 GGASP-PTSKARGPANAQGSDAETRESNFKYSPNMEINKIFVRNLHPACSKEELHELFSP 752
Query: 156 FVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
F K+VRLV K ++ G + +V+F P A A+ G
Sbjct: 753 FGSIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQRAVAGRDGH 793
>gi|328352765|emb|CCA39163.1| Protein WHI4 [Komagataella pastoris CBS 7435]
Length = 496
Score = 40.0 bits (92), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES--RHPGGDPLILCFVDFVSPAHA 190
+TL+V LP D + E+ +F P G++ + +K S GG +CFV+F S A
Sbjct: 382 NTLYVGNLPGDATEAELRSLFTPVKGFRRLSFKNKTSISGSSGGGGGPMCFVEFNSITEA 441
Query: 191 ATAMDALQGQS 201
A A+ L G S
Sbjct: 442 AEALANLYGTS 452
>gi|332020337|gb|EGI60759.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Acromyrmex
echinatior]
Length = 903
Score = 40.0 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ ++ IF+ KEVRLV+ + H G L +V++ A AA A+
Sbjct: 754 LFVKGLPLTMTKEKLEEIFKVHGDLKEVRLVTYRNGHSKG----LAYVEYHDEATAAKAL 809
Query: 195 ---DALQGQSNII 204
D ++ Q +I
Sbjct: 810 LSTDGMKIQDKVI 822
>gi|344295187|ref|XP_003419295.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Loxodonta africana]
Length = 968
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 808 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 863
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 864 MKMDGMTIKENVI 876
>gi|255572977|ref|XP_002527419.1| RNA binding protein, putative [Ricinus communis]
gi|223533229|gb|EEF34985.1| RNA binding protein, putative [Ricinus communis]
Length = 206
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLF+ L +C+ E+ H + G+ +++ +K GG P + F DF A
Sbjct: 124 STLFIANLGPNCTEDELRHTLSQYPGFNVLKMRAK-----GGMP--VAFADFEEIEQAIK 176
Query: 193 AMDALQG 199
AM+ LQG
Sbjct: 177 AMEDLQG 183
>gi|169611634|ref|XP_001799235.1| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
gi|160702333|gb|EAT84100.2| hypothetical protein SNOG_08932 [Phaeosphaeria nodorum SN15]
Length = 204
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+ LF++ +P D ++ ++F F G+KEVRLVS + + F +F + A
Sbjct: 129 NKVLFLQNIPRDIDEEDLTNVFDRFEGFKEVRLVSVRA---------VAFAEFENEQFAI 179
Query: 192 TAMDA 196
TA +A
Sbjct: 180 TAKEA 184
>gi|431894111|gb|ELK03912.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Pteropus
alecto]
Length = 981
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + +++RLV+ + P G L +V++ + + A+ A
Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVRDIRLVTNRAGKPKG----LAYVEYENESQASQAV 876
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 877 MKMDGMTIKENVI 889
>gi|395833841|ref|XP_003789927.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Otolemur garnettii]
Length = 964
Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 805 LFISGLPFSCTKEELEEICKTHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 860
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 861 LKMDGMTIKENVI 873
>gi|126303676|ref|XP_001374230.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like isoform 1
[Monodelphis domestica]
Length = 225
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG + + A G ++ P PD + LF+ LP + + ++ +F + +KEVRL
Sbjct: 124 PGQATPNSA-NTQGNSTQNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQYPVFKEVRL 182
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
RH + FV+F + A A DALQG
Sbjct: 183 --GPGRHD------IAFVEFENDGQAGAARDALQG 209
>gi|354490464|ref|XP_003507377.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3,
partial [Cricetulus griseus]
Length = 814
Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 655 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 710
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 711 MKMDGMTIKENVI 723
>gi|344255872|gb|EGW11976.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Cricetulus
griseus]
Length = 803
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 644 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 699
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 700 MKMDGMTIKENVI 712
>gi|345323818|ref|XP_001507791.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Ornithorhynchus anatinus]
Length = 1013
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + A A+ A
Sbjct: 856 LFISGLPFSCTKEELEEICQAHGTVKDLRLVTNRAGKPKG----LAYVEYENEAQASQAV 911
Query: 194 --MDALQGQSNII 204
MD + + N I
Sbjct: 912 LKMDGMTVKQNTI 924
>gi|388854650|emb|CCF51807.1| probable RNA-binding protein [Ustilago hordei]
Length = 874
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAHA 190
S LFV LP S EV F F K+V + + K+++ G L F+ F PAHA
Sbjct: 328 SGRLFVRNLPFAASEDEVQSFFESFGSVKQVHIPLDKQTKASKG----LAFISFTDPAHA 383
Query: 191 ATAMDALQGQS 201
A A G +
Sbjct: 384 LAAFRAKDGST 394
>gi|384493858|gb|EIE84349.1| hypothetical protein RO3G_09059 [Rhizopus delemar RA 99-880]
Length = 387
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPS ++ E+ +F GYK + K P P +CFV+F +A
Sbjct: 282 NTLYVGNLPSSTNQEELRSLFSKCEGYKRMSFRIKS---PQQGP--MCFVEFEDVLYATQ 336
Query: 193 AMDALQGQSNIICLSNLV 210
AM LQG + LSN V
Sbjct: 337 AMTQLQGHA----LSNSV 350
>gi|326507414|dbj|BAK03100.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528465|dbj|BAJ93414.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 249
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+ LP D + + F + G+KEVR++ + PG + FV++ A
Sbjct: 175 NNILFVQELPHDATALMLQMFFCQYPGFKEVRMIEAK---PG-----IAFVEYGDEGQAT 226
Query: 192 TAMDALQG 199
AM+ LQG
Sbjct: 227 AAMNLLQG 234
>gi|226488853|emb|CAX74776.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 256 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVP--GRHD------IAFVEFGNE 305
Query: 188 AHAATAMDALQG 199
A+ A LQG
Sbjct: 306 VEASAAKLGLQG 317
>gi|149263421|ref|XP_995150.2| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Mus musculus]
Length = 309
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LF+ LP + + ++ +F F G+KE LV PG + FV+F + A A+
Sbjct: 212 LFLTNLPEETNELMLSMLFTQFPGFKEAHLV------PGCH--DIAFVEFDNEVQAGAAL 263
Query: 195 DALQG----QSNIICLS 207
DALQG Q+N + +S
Sbjct: 264 DALQGFKITQNNAMKIS 280
>gi|401623965|gb|EJS42043.1| whi3p [Saccharomyces arboricola H-6]
Length = 664
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 601 ALAELYGR 608
>gi|448106273|ref|XP_004200705.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|448109390|ref|XP_004201336.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382127|emb|CCE80964.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
gi|359382892|emb|CCE80199.1| Piso0_003301 [Millerozyma farinosa CBS 7064]
Length = 496
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 69 RSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLP 128
S+Q +S S QS D P+I G + P AK++ + + VP P
Sbjct: 303 NSSQTNSQSASQS-------------DTPQISPASGQN-TPIAKNKDVPDLSLLARVPPP 348
Query: 129 PDAS------STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI---- 178
+ + +TL+V LP D + +E+ +F P G++ + +K S
Sbjct: 349 ANPADQNPPCNTLYVGNLPPDATEQELRALFSPQKGFRRLSFRTKNSSSSNSGHSGSHNH 408
Query: 179 --LCFVDFVSPAHAATAMDALQGQS 201
+CFV+F AHA A+ L G++
Sbjct: 409 GPMCFVEFEDVAHATRALAELYGRT 433
>gi|157104329|ref|XP_001648356.1| RNA binding motif protein [Aedes aegypti]
gi|108880340|gb|EAT44565.1| AAEL004075-PA [Aedes aegypti]
Length = 860
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 13/106 (12%)
Query: 100 VGIGGMDPGPSAKDRALGLGG---GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
V I G S DR L GR L + + V +P + +E+ +F+ F
Sbjct: 684 VHIDGRKVELSRSDRTLNTEADTHGRKASKLKKQTGTKILVRNVPFQANAKEIRDLFKVF 743
Query: 157 VGYKEVRL-----VSKESRHPGGDPLILCFVDFVSPAHAATAMDAL 197
K VRL S + H G CFVDFV+ A A +AL
Sbjct: 744 GELKSVRLPRKMVSSADESHRG-----FCFVDFVTENDAKQAFEAL 784
>gi|241686636|ref|XP_002412834.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
gi|215506636|gb|EEC16130.1| hypothetical protein IscW_ISCW022577 [Ixodes scapularis]
Length = 144
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K ++ G + FV F S A A A
Sbjct: 77 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLL--KVTQKNGKTSSPVGFVTFSSRAGAEAA 134
Query: 194 MDALQGQSNI 203
LQ +
Sbjct: 135 KQELQESGEV 144
>gi|395513864|ref|XP_003761142.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Sarcophilus harrisii]
Length = 1030
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + +++RLV+ + P G L +V++ + A A+ A
Sbjct: 871 LFISGLPFSCTKEELEDICKVHGSVRDLRLVTNRAGKPKG----LAYVEYENEAQASQAV 926
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 927 LKMDGMTIKENVI 939
>gi|361128202|gb|EHL00148.1| putative U1 small nuclear ribonucleoprotein [Glarea lozoyensis
74030]
Length = 273
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 25/112 (22%)
Query: 91 SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVP---LPPDASSTLFVEGLPSDCSRR 147
+RP+ R G+ +P G + +P LPP+ LFV+ LP +
Sbjct: 167 ARPIKATRGAGLKSSNPS------------GGAVIPDEYLPPN--KILFVQNLPDEYEVN 212
Query: 148 EVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
+ IF F G+KEVRLV PG + FV++ S A +A + G
Sbjct: 213 ALTSIFERFEGFKEVRLV------PGRTG--IAFVEYESEVGAISAKENTAG 256
>gi|115462171|ref|NP_001054685.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|122169518|sp|Q0DKM4.1|RU1A_ORYSJ RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|384950745|sp|A2Y0J7.1|RU1A_ORYSI RecName: Full=U1 small nuclear ribonucleoprotein A; Short=U1 snRNP
protein A
gi|113578236|dbj|BAF16599.1| Os05g0154800 [Oryza sativa Japonica Group]
gi|125550898|gb|EAY96607.1| hypothetical protein OsI_18512 [Oryza sativa Indica Group]
gi|222630249|gb|EEE62381.1| hypothetical protein OsJ_17170 [Oryza sativa Japonica Group]
Length = 253
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+ LP + + + +F + G+KEVR+V + PG + FV++ A
Sbjct: 178 NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVEYGDEGQAT 229
Query: 192 TAMDALQG 199
AM+ LQG
Sbjct: 230 AAMNHLQG 237
>gi|226469924|emb|CAX70243.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
gi|226488855|emb|CAX74777.1| U1 small nuclear ribonucleoprotein A [Schistosoma japonicum]
Length = 333
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 256 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVP--GRHD------IAFVEFGNE 305
Query: 188 AHAATAMDALQG 199
A+ A LQG
Sbjct: 306 VEASAAKLGLQG 317
>gi|348584250|ref|XP_003477885.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Cavia porcellus]
Length = 961
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 802 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 857
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 858 IKMDGMTIKENVI 870
>gi|156402343|ref|XP_001639550.1| predicted protein [Nematostella vectensis]
gi|156226679|gb|EDO47487.1| predicted protein [Nematostella vectensis]
Length = 862
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLIL 179
G E P S LF+ L CS ++ H+F F EV L + K + G +
Sbjct: 351 GDDEEEEPIGESGRLFLRNLAYSCSEEDIQHLFEKFGPLSEVNLPLDKHTNKTIG----I 406
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV F+ P HA A + L G
Sbjct: 407 GFVTFLMPEHAVKAFNELDG 426
>gi|240254272|ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName: Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33
gi|6572475|gb|AAF17288.1|AF099940_1 Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis thaliana]
gi|332195101|gb|AEE33222.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 287
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + GDP FV F+ PA AA A + G ++ L V +
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY--LLLGRELTVVF 111
>gi|440893379|gb|ELR46176.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Bos
grunniens mutus]
Length = 958
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LFV GLP C++ E+ I + K++RLV+ + P G L +V++ + A+ A
Sbjct: 804 LFVSGLPFSCTKEELEEICKAHGTVKDIRLVTNRAGKPKG----LAYVEYENELQASQAV 859
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 860 LKMDGMTIRENVI 872
>gi|82754190|gb|ABB89906.1| RNP-4F [Drosophila melanogaster]
Length = 88
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P + +FV L CS+ E+ +F PF K+VRLV K ++ G + +V+F P
Sbjct: 8 PNMEINKIFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKG----IAYVEFEKP 63
Query: 188 AHAATAMDALQG 199
A A+ G
Sbjct: 64 GEAQRAVAGRDG 75
>gi|388496982|gb|AFK36557.1| unknown [Medicago truncatula]
Length = 268
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TLFV GLP D RE+ ++FR G+ +L ++ G ++ F F + A
Sbjct: 21 NTLFVSGLPDDVKAREIHNLFRRRPGFDSCQL-----KYTGRANQVVAFATFFNHQAAMQ 75
Query: 193 AMDALQG 199
A+ +L G
Sbjct: 76 ALHSLNG 82
>gi|334312138|ref|XP_003339722.1| PREDICTED: u2 small nuclear ribonucleoprotein B''-like [Monodelphis
domestica]
Length = 180
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 107 PGPSAKDRALGLGGGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
PG + + A G ++ P PD + LF+ LP + + ++ +F + +KEVRL
Sbjct: 79 PGQATPNSA-NTQGNSTQNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQYPVFKEVRL 137
Query: 165 VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
RH + FV+F + A A DALQG
Sbjct: 138 --GPGRHD------IAFVEFENDGQAGAARDALQG 164
>gi|296212815|ref|XP_002752998.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 1 [Callithrix jacchus]
Length = 963
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEEICKVHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIKENVI 871
>gi|429327511|gb|AFZ79271.1| U1/2 small nuclear ribonucleoprotein, putative [Babesia equi]
Length = 207
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Query: 128 PPDASS----TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVD 183
P +ASS TLFVE +P D ++ V +F + G+K R + E R + F+D
Sbjct: 126 PAEASSKESHTLFVENIPPDINKDGVELLFNQYPGFKGCRFI--EGR-------CVAFID 176
Query: 184 FVSPAHAATAMDALQG 199
F + A A+ LQG
Sbjct: 177 FALVSQAEAALQGLQG 192
>gi|8394239|ref|NP_058622.1| squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|81917559|sp|Q9JLI8.1|SART3_MOUSE RecName: Full=Squamous cell carcinoma antigen recognized by T-cells
3; Short=SART-3; Short=mSART-3; AltName:
Full=Tumor-rejection antigen SART3
gi|7637845|gb|AAF65228.1|AF172722_1 tumor-rejection antigen SART3 [Mus musculus]
gi|34980898|gb|AAH57156.1| Squamous cell carcinoma antigen recognized by T-cells 3 [Mus
musculus]
gi|148687992|gb|EDL19939.1| squamous cell carcinoma antigen recognized by T-cells 3, isoform
CRA_b [Mus musculus]
Length = 962
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIRENVI 871
>gi|26352049|dbj|BAC39661.1| unnamed protein product [Mus musculus]
Length = 962
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIRENVI 871
>gi|425774296|gb|EKV12605.1| RNA binding protein [Penicillium digitatum Pd1]
gi|425776297|gb|EKV14519.1| RNA binding protein [Penicillium digitatum PHI26]
Length = 518
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 308 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDEVAMASK 360
Query: 193 AMDALQG 199
A++ L G
Sbjct: 361 ALNELYG 367
>gi|357134589|ref|XP_003568899.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like [Brachypodium
distachyon]
Length = 251
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
GG + +P ++ LFV+ LP D + + +F + G+KE R++ + PG
Sbjct: 163 GGPKVMMPEIIVPNNILFVQNLPHDTTPMMLQMLFCQYQGFKEARMIEAK---PG----- 214
Query: 179 LCFVDFVSPAHAATAMDALQG 199
+ FV++ A AM ALQ
Sbjct: 215 IAFVEYGDEGQATAAMSALQN 235
>gi|320581887|gb|EFW96106.1| multiple RNA-binding domain-containing protein 1 [Ogataea
parapolymorpha DL-1]
Length = 824
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S + V+ L + +R ++ +F PF K VR+ K + G FV+F + A
Sbjct: 700 SPKIIVKNLAFESTRNDIFELFSPFGNLKSVRVPKKFDKSARG----FAFVEFSTLKEAE 755
Query: 192 TAMDALQG 199
+AMD LQG
Sbjct: 756 SAMDQLQG 763
>gi|320580822|gb|EFW95044.1| hypothetical protein HPODL_3416 [Ogataea parapolymorpha DL-1]
Length = 602
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 10/75 (13%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE------SRHPGGDPLILCFVDFVS 186
+TL+V LP D + E+ +F+P G++ + +K+ S H G +CFV+F
Sbjct: 449 NTLYVGNLPPDATELELRTLFQPQKGFRRLSFRTKQNTGNGSSSHHGP----MCFVEFED 504
Query: 187 PAHAATAMDALQGQS 201
A+A A+ L G++
Sbjct: 505 VAYATRALAELYGRT 519
>gi|84995232|ref|XP_952338.1| U1/2 small nuclear ribonucleoprotein [Theileria annulata strain
Ankara]
gi|65302499|emb|CAI74606.1| U1/2 small nuclear ribonucleoprotein, putative [Theileria annulata]
Length = 206
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
D S +LFV+ +P D SR + +F+ + G++ R + E R + FVD+ +
Sbjct: 131 DESHSLFVQNIPHDMSRESLELLFKQYPGFRGCRFI--EGR-------FVAFVDYSMASQ 181
Query: 190 AATAMDALQG 199
A A++ L G
Sbjct: 182 AEIALEGLNG 191
>gi|323449244|gb|EGB05134.1| hypothetical protein AURANDRAFT_1296 [Aureococcus anophagefferens]
Length = 464
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAH 189
A + L+V LP D S E+ F P EV +SKE+R P G FV FV P
Sbjct: 12 AGARLYVANLPYDASEEEILAYFSPHGTVSEVHQPLSKETRAPLG----FAFVTFVLPTA 67
Query: 190 AATAMDALQGQS 201
A A +L G S
Sbjct: 68 AEAATASLDGAS 79
>gi|256270770|gb|EEU05931.1| Whi3p [Saccharomyces cerevisiae JAY291]
Length = 661
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 598 ALAELYGR 605
>gi|207341833|gb|EDZ69780.1| YNL197Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 661
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 598 ALAELYGR 605
>gi|151944344|gb|EDN62622.1| whiskey [Saccharomyces cerevisiae YJM789]
Length = 661
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 598 ALAELYGR 605
>gi|349580746|dbj|GAA25905.1| K7_Whi3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 661
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 598 ALAELYGR 605
>gi|323303359|gb|EGA57155.1| Whi3p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 598 ALAELYGR 605
>gi|307202627|gb|EFN81948.1| Protein couch potato [Harpegnathos saltator]
Length = 189
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
STLFV L S E+ IF F G+ +R+ +K GG P+ F+++ +AA
Sbjct: 91 STLFVANLGQFVSEHELKDIFSSFPGFSRLRMHTK-----GGSPV--AFIEYQDVRYAAQ 143
Query: 193 AMDALQG 199
AM LQG
Sbjct: 144 AMATLQG 150
>gi|168028479|ref|XP_001766755.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681964|gb|EDQ68386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 235
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV+ LP + + + +F+ F G+KEVR++ + PG + FV+F A
Sbjct: 160 NNILFVQNLPHEATSLAIQVLFQQFPGFKEVRMIEAK---PG-----IAFVEFGDELQAT 211
Query: 192 TAMDAL 197
A+ L
Sbjct: 212 VALQGL 217
>gi|157820585|ref|NP_001100626.1| squamous cell carcinoma antigen recognized by T-cells 3 [Rattus
norvegicus]
gi|149063643|gb|EDM13966.1| squamous cell carcinoma antigen recognized by T-cells 3 (predicted)
[Rattus norvegicus]
Length = 960
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 801 LFISGLPFSCTKEELEGICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 856
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 857 LKMDGMTIKENVI 869
>gi|297724471|ref|NP_001174599.1| Os06g0148000 [Oryza sativa Japonica Group]
gi|55297048|dbj|BAD68617.1| unknown protein [Oryza sativa Japonica Group]
gi|55297147|dbj|BAD68790.1| unknown protein [Oryza sativa Japonica Group]
gi|215765432|dbj|BAG87129.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676715|dbj|BAH93327.1| Os06g0148000 [Oryza sativa Japonica Group]
Length = 150
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIF 153
D S+ LFV+GLP+DC+RREVA I
Sbjct: 125 DESNILFVDGLPTDCTRREVARIL 148
>gi|356526326|ref|XP_003531769.1| PREDICTED: uncharacterized protein LOC100817421 [Glycine max]
Length = 318
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F +P A TA
Sbjct: 41 TIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAEKPMG-------FALFSAPHQALTA 93
Query: 194 MDALQ 198
D LQ
Sbjct: 94 KDILQ 98
>gi|195396387|ref|XP_002056813.1| GJ16680 [Drosophila virilis]
gi|194146580|gb|EDW62299.1| GJ16680 [Drosophila virilis]
Length = 915
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G R +V + + V +P REV IF+ F +RL K + PG D
Sbjct: 770 GARRRQVAQKKQTGTKILVRNIPFQAHYREVRDIFKAFGELTSLRLPKKMT--PGEDAHR 827
Query: 179 -LCFVDFVSPAHAATAMDALQGQSNI 203
FVDF + A A A DAL +++
Sbjct: 828 GFGFVDFTTKADAKRAFDALSASTHL 853
>gi|6324132|ref|NP_014202.1| Whi3p [Saccharomyces cerevisiae S288c]
gi|465481|sp|P34761.1|WHI3_YEAST RecName: Full=Protein WHI3
gi|393077|gb|AAA03320.1| Whi3p [Saccharomyces cerevisiae]
gi|600068|emb|CAA55511.1| N1382 [Saccharomyces cerevisiae]
gi|1302195|emb|CAA96092.1| WHI3 [Saccharomyces cerevisiae]
gi|285814462|tpg|DAA10356.1| TPA: Whi3p [Saccharomyces cerevisiae S288c]
gi|392296797|gb|EIW07898.1| Whi3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 598 ALAELYGR 605
>gi|383858361|ref|XP_003704670.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Megachile rotundata]
Length = 905
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV+GLP ++ E+ IF+ KEVR+V+ + H G L +V++ AA A+
Sbjct: 755 LFVKGLPVTTTKEELEEIFKVHGTLKEVRIVTYRNGHSKG----LAYVEYDDENSAAKAL 810
Query: 195 DALQG 199
A G
Sbjct: 811 LATDG 815
>gi|390468140|ref|XP_003733891.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
isoform 2 [Callithrix jacchus]
Length = 927
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 767 LFISGLPFSCTKEELEEICKVHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 822
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 823 MKMDGMTIKENVI 835
>gi|259149165|emb|CAY82407.1| Whi3p [Saccharomyces cerevisiae EC1118]
gi|365763510|gb|EHN05038.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQG 199
A+ L G
Sbjct: 598 ALAELYG 604
>gi|224059684|ref|XP_002299969.1| predicted protein [Populus trichocarpa]
gi|222847227|gb|EEE84774.1| predicted protein [Populus trichocarpa]
Length = 125
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFV 185
LPP+ + L+V LP + S E+ IF + +++R+ +K++R FV +
Sbjct: 14 LPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGT-------AFVVYE 66
Query: 186 SPAHAATAMDALQGQSNIICLSNLVVFYQ 214
A TA+D L G N+ +V++YQ
Sbjct: 67 DIYDAKTAVDHLSG-FNVANRYLIVLYYQ 94
>gi|405952552|gb|EKC20349.1| Regulator of G-protein signaling 12 [Crassostrea gigas]
Length = 1023
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 2 ADGYWRYSDARQPQSALPSLVSKRPRT---DYDVPSGHELSSYYTR--------DDDRGA 50
AD + +S +R S SL+S ++ D +PS E Y+ DD R A
Sbjct: 784 ADSFLDHSSSRGFDSVDESLISHEDQSFSADGVIPSSSEAEVYFQTTDPDSADFDDPRLA 843
Query: 51 LRGMRDTDSLGASYDRYLRSAQISSYS-----GGQSARHMSGGMPSRP 93
+G+RD LG Y + A+ YS G S RH S G P++P
Sbjct: 844 EKGLRD---LGFDYSYNMYQAKAWGYSRHRPTGLSSPRHQSKGTPNKP 888
>gi|358340304|dbj|GAA48227.1| U1 small nuclear ribonucleoprotein A [Clonorchis sinensis]
Length = 314
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 237 PPN--KILFLTNLPEDSDEAMLSMLFNQFSGYREVRMVP--GRHD------IAFVEFGNE 286
Query: 188 AHAATAMDALQG 199
A A LQG
Sbjct: 287 IEAGAAKHGLQG 298
>gi|159490942|ref|XP_001703432.1| RNA-binding protein C3, CELF family [Chlamydomonas reinhardtii]
gi|158280356|gb|EDP06114.1| RNA-binding protein C3, CELF family [Chlamydomonas reinhardtii]
Length = 382
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR + P+ A LFV +P + + + +F PF +V +++K PG
Sbjct: 39 GRGDGPVMGVAPKKLFVGQIPQHTTEQHIRSLFAPFGNITDVHVLNK-GNAPG-----CA 92
Query: 181 FVDFVSPAHAATAMDALQGQSNI 203
FV + AHA AM +L GQ+ I
Sbjct: 93 FVTYERWAHAEAAMLSLNGQTLI 115
>gi|1050840|emb|CAA90282.1| U1snRNP-specific protein, U1A [Solanum tuberosum]
Length = 253
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
+S LFV+ LP + + +F + G+KEVR++ + PG + F+++ +
Sbjct: 178 NSILFVQNLPHQSTPMMLQMLFCQYPGFKEVRMIEAK---PG-----IAFIEYGDEMQST 229
Query: 192 TAMDALQG 199
AM ALQG
Sbjct: 230 VAMQALQG 237
>gi|156366101|ref|XP_001626979.1| predicted protein [Nematostella vectensis]
gi|156213874|gb|EDO34879.1| predicted protein [Nematostella vectensis]
Length = 335
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 10/73 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPF---VGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
++ L++ GLP D EV +F+PF + K ++ VS E R G FV F
Sbjct: 95 NANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTG-------FVRFDKRC 147
Query: 189 HAATAMDALQGQS 201
A TA+D L ++
Sbjct: 148 EAQTAIDDLNNKT 160
>gi|291411787|ref|XP_002722167.1| PREDICTED: squamous cell carcinoma antigen recognized by T cells 3
[Oryctolagus cuniculus]
Length = 963
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
LF+ GLP C++ E+ I + K++RLV+ + P G L +V++ + + A+ A
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858
Query: 194 --MDALQGQSNII 204
MD + + N+I
Sbjct: 859 MKMDGMTIRENVI 871
>gi|24639833|ref|NP_511047.2| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|45554213|ref|NP_996353.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|161077571|ref|NP_001096884.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|59800212|sp|Q9W4D2.1|RNP4F_DROME RecName: Full=RNA-binding protein 4F
gi|7290571|gb|AAF46022.1| RNA-binding protein 4F, isoform A [Drosophila melanogaster]
gi|16769448|gb|AAL28943.1| LD32008p [Drosophila melanogaster]
gi|45446810|gb|AAS65263.1| RNA-binding protein 4F, isoform B [Drosophila melanogaster]
gi|158031720|gb|ABW09340.1| RNA-binding protein 4F, isoform D [Drosophila melanogaster]
gi|220947218|gb|ACL86152.1| Rnp4F-PA [synthetic construct]
gi|220956760|gb|ACL90923.1| Rnp4F-PA [synthetic construct]
Length = 941
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+FV L CS+ E+ +F PF K+VRLV K ++ G + +V+F P A A+
Sbjct: 726 IFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQRAV 781
Query: 195 DALQG 199
G
Sbjct: 782 AGRDG 786
>gi|254580201|ref|XP_002496086.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
gi|238938977|emb|CAR27153.1| ZYRO0C10164p [Zygosaccharomyces rouxii]
Length = 745
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K S G P +CFV+F + A
Sbjct: 617 NTLYVGNLPPDATEQELRQLFSGQQGFRRLSFRNKNSNGNGHGP--MCFVEFEDVSFATR 674
Query: 193 AMDALQG 199
A+ L G
Sbjct: 675 ALAELYG 681
>gi|15293081|gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + GDP FV F+ PA AA A + G ++ L V +
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY--LLLGRELTVVF 111
>gi|240254274|ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
Length = 220
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + GDP FV F+ PA AA A + G ++ L V +
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY--LLLGRELTVVF 111
>gi|21615411|emb|CAD33925.1| proline rich protein 3 [Cicer arietinum]
Length = 284
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F SP A A
Sbjct: 6 TIFITGLPEDVKEREIQNLLRWLPGFEASQLNFKAEKPMG-------FALFSSPHQAIAA 58
Query: 194 MDALQ 198
D LQ
Sbjct: 59 KDILQ 63
>gi|58271580|ref|XP_572946.1| polyadenylation factor 64 kDa subunit [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229205|gb|AAW45639.1| polyadenylation factor 64 kDa subunit, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 455
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPF--VGYKEVRLVSKESRHPGGDPLILCFVDF 184
+PP+AS T+FV +P D S ++A++F V E++ + R G FV F
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKG-----YAFVQF 55
Query: 185 VSPAHAATAMDALQ 198
A A +A+ LQ
Sbjct: 56 YDEATALSAVRNLQ 69
>gi|308802782|ref|XP_003078704.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116057157|emb|CAL51584.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 907
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 121 GRSEVPLPPDASST-LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGDPLI 178
G+ +P S+T L + + + ++R++ +F PF K+VRL K + H G
Sbjct: 787 GKESSKVPTGFSATKLVIRNVAFEATKRDIQKLFNPFGQLKQVRLPKKFDGAHRG----- 841
Query: 179 LCFVDFVSPAHAATAMDALQG 199
FV+F + AMDAL+G
Sbjct: 842 FAFVEFNTARETQAAMDALKG 862
>gi|307102554|gb|EFN50825.1| hypothetical protein CHLNCDRAFT_28661 [Chlorella variabilis]
Length = 219
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFVE LP+ + + +F+ F G KEV V + PG + F++F + A
Sbjct: 145 NAKLFVENLPAATTAAMLEMLFQQFPGCKEVTTVPAK---PG-----IAFIEFETEMQAT 196
Query: 192 TAMDALQG 199
AM LQG
Sbjct: 197 VAMTGLQG 204
>gi|195996479|ref|XP_002108108.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
gi|190588884|gb|EDV28906.1| hypothetical protein TRIADDRAFT_52243 [Trichoplax adhaerens]
Length = 298
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P STLFV L + + +E+ IF VG++ +R+ K PG F++F +
Sbjct: 202 PQVCSTLFVANLGRNITDKELRDIFGRCVGFRRLRMHKK----PGFP--TTAFIEFANIQ 255
Query: 189 HAATAMDALQG 199
A A++ALQG
Sbjct: 256 FATQALNALQG 266
>gi|2582672|emb|CAA75535.1| RNA binding protein [Drosophila melanogaster]
Length = 943
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+FV L CS+ E+ +F PF K+VRLV K ++ G + +V+F P A A+
Sbjct: 728 IFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQRAV 783
Query: 195 DALQG 199
G
Sbjct: 784 AGRDG 788
>gi|47203440|emb|CAG13908.1| unnamed protein product [Tetraodon nigroviridis]
Length = 41
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKE--VRLVSKE 168
TLFV GLP D RE+ +FRPF GY+ ++L SK+
Sbjct: 4 TLFVSGLPLDIKPRELYLLFRPFKGYEGSLIKLTSKQ 40
>gi|365758778|gb|EHN00605.1| Whi3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 664
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 541 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 600
Query: 193 AMDALQGQ 200
A+ L G+
Sbjct: 601 ALAELYGR 608
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 38.9 bits (89), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 11/101 (10%)
Query: 113 DRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHP 172
DRA G RS P S+TLF+ L DC+ + IF Y + VS +
Sbjct: 323 DRANKYGDKRS-AP-----SNTLFLGNLSFDCTNDSIQEIF---AEYGNITRVSLPTDRD 373
Query: 173 GGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
G +VDF S A A+DAL GQ I N+ + Y
Sbjct: 374 TGSIKGFGYVDFGSQEEATAALDALNGQD--IAGRNIRIDY 412
>gi|326512082|dbj|BAJ96022.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ + LF++ LP + + +F+ + G++EVR++ + PG + FV++
Sbjct: 156 PPN--NILFLQNLPDQTTSVMLQILFQQYPGFREVRMIEAK---PG-----IAFVEYEDE 205
Query: 188 AHAATAMDALQG 199
+ AM+ALQG
Sbjct: 206 NQSMVAMEALQG 217
>gi|323352890|gb|EGA85192.1| Whi3p [Saccharomyces cerevisiae VL3]
Length = 629
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQG 199
A+ L G
Sbjct: 598 ALAELYG 604
>gi|256083949|ref|XP_002578197.1| small nuclear ribonucleoprotein U)1aU)2b [Schistosoma mansoni]
gi|353232716|emb|CCD80071.1| putative small nuclear ribonucleoprotein U)1a,U)2b [Schistosoma
mansoni]
Length = 328
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LF+ LP D ++ +F F GY+EVR+V RH + FV+F +
Sbjct: 251 PPN--KILFLTNLPDDSDEAMLSMLFGQFTGYREVRMVP--GRHD------IAFVEFGNE 300
Query: 188 AHAATAMDALQG 199
A+ A LQG
Sbjct: 301 VEASAAKLGLQG 312
>gi|134114518|ref|XP_774089.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256721|gb|EAL19442.1| hypothetical protein CNBH0140 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 455
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPF--VGYKEVRLVSKESRHPGGDPLILCFVDF 184
+PP+AS T+FV +P D S ++A++F V E++ + R G FV F
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKG-----YAFVQF 55
Query: 185 VSPAHAATAMDALQ 198
A A +A+ LQ
Sbjct: 56 YDEATALSAVRNLQ 69
>gi|40792688|gb|AAR90344.1| circadian RNA-binding protein CHLAMY 1 subunit C3, partial
[Chlamydomonas reinhardtii]
Length = 374
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
GR + P+ A LFV +P + + + +F PF +V +++K PG
Sbjct: 31 GRGDGPVMGVAPKKLFVGQIPQHTTEQHIRSLFAPFGNITDVHVLNK-GNAPG-----CA 84
Query: 181 FVDFVSPAHAATAMDALQGQSNI 203
FV + AHA AM +L GQ+ I
Sbjct: 85 FVTYERWAHAEAAMLSLNGQTLI 107
>gi|449681275|ref|XP_002157969.2| PREDICTED: uncharacterized protein LOC100208163 [Hydra
magnipapillata]
Length = 328
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYK--EVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
TLFV GLP D RE+ +FR + GY+ ++L KE G + FV F + A
Sbjct: 28 TLFVSGLPMDTKPREIYLMFRSYSGYQGSLLKLTGKE----GKKATPVAFVTFENREQAE 83
Query: 192 TAMDALQG 199
LQG
Sbjct: 84 VCKAELQG 91
>gi|45198297|ref|NP_985326.1| AFL224Wp [Ashbya gossypii ATCC 10895]
gi|44984184|gb|AAS53150.1| AFL224Wp [Ashbya gossypii ATCC 10895]
gi|374108554|gb|AEY97460.1| FAFL224Wp [Ashbya gossypii FDAG1]
Length = 206
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 20/157 (12%)
Query: 93 PVDDPRIVGIGGMDPGPSAKD-RALGLGGGRSEVPLPP-------------DASSTLFVE 138
PV D + G D PS D + G + +P P D S +++
Sbjct: 24 PVSDAELDGFSDSDAEPSVTDEQPQPAAAGHTILPQQPARRSGAKKQAARTDLSGIIYIS 83
Query: 139 GLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQ 198
LP RE++ F F K+VRL + G+ F++F +P A A + +
Sbjct: 84 RLPHGFHERELSTYFAQFGDLKQVRLARNKK---TGNSRHYAFIEFANPDDAVVAQETMH 140
Query: 199 GQSNIICLSNLVVFYQIACEYISDKICVHIKFLCMHN 235
N + + +L+ + +K+ H K + N
Sbjct: 141 ---NYLLMGHLLQVSVLPKGRTIEKLYKHKKRVHKEN 174
>gi|356530697|ref|XP_003533917.1| PREDICTED: MKI67 FHA domain-interacting nucleolar
phosphoprotein-like [Glycine max]
Length = 214
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 105 MDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL 164
++ GP+ K L G + P P + ++ L+V +P +E+ F F K +R+
Sbjct: 31 LEGGPARK-----LAGQQKPPPPPENTATVLYVGRIPHGFYEKEMEGYFGQFGTIKRLRI 85
Query: 165 V----SKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFYQIACEYI 220
S +SRH G F++F SP A D + N + +L+ Y I E++
Sbjct: 86 ARNKKSGKSRHFG-------FIEFESPEVAKIVADTMH---NYLLFEHLLQVYVIPPEHV 135
Query: 221 SDKIC 225
+I
Sbjct: 136 HPRIW 140
>gi|323346831|gb|EGA81110.1| Whi3p [Saccharomyces cerevisiae Lalvin QA23]
Length = 629
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQG 199
A+ L G
Sbjct: 598 ALAELYG 604
>gi|321261626|ref|XP_003195532.1| polyadenylation factor 64 kDasubunit [Cryptococcus gattii WM276]
gi|317462006|gb|ADV23745.1| Polyadenylation factor 64 kDasubunit, putative [Cryptococcus gattii
WM276]
Length = 452
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPF--VGYKEVRLVSKESRHPGGDPLILCFVDF 184
+PP+AS T+FV +P D S ++A++F V E++ + R G FV F
Sbjct: 1 MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKG-----YAFVQF 55
Query: 185 VSPAHAATAMDALQ 198
A A +A+ LQ
Sbjct: 56 YDEATALSAVRNLQ 69
>gi|255949550|ref|XP_002565542.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592559|emb|CAP98914.1| Pc22g16260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 602
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A A+
Sbjct: 391 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDEVAMASK 443
Query: 193 AMDALQG 199
A++ L G
Sbjct: 444 ALNELYG 450
>gi|323335900|gb|EGA77178.1| Whi3p [Saccharomyces cerevisiae Vin13]
Length = 629
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597
Query: 193 AMDALQG 199
A+ L G
Sbjct: 598 ALAELYG 604
>gi|297847894|ref|XP_002891828.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
gi|297337670|gb|EFH68087.1| hypothetical protein ARALYDRAFT_892527 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + GDP FV F+ PA AA A + G ++ L V +
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY--LLLGRELTVVF 111
>gi|363754827|ref|XP_003647629.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891266|gb|AET40812.1| hypothetical protein Ecym_6441 [Eremothecium cymbalariae
DBVPG#7215]
Length = 689
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Query: 108 GPSAKDRALGLGGGRSEVPL------PPDAS--------STLFVEGLPSDCSRREVAHIF 153
GP AL G S+V L PP A+ +TL+V LP D + +E+ +F
Sbjct: 528 GPRNAAAALQNTNGISQVDLSLLAKVPPPANPADQNPPCNTLYVGNLPPDATEQELRQLF 587
Query: 154 RPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
G++ + +K + G P +CFV+F AHA A+ L G
Sbjct: 588 SSQKGFRRLSFRNKNNNGNGHGP--MCFVEFEDVAHATRALAELYG 631
>gi|12323160|gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P G GGRS D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + GDP FV F+ PA AA A + G ++ L V +
Sbjct: 60 GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY--LLLGRELTVVF 111
>gi|116195978|ref|XP_001223801.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88180500|gb|EAQ87968.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 247
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 109 PSAKDRALGL----GGGRSEVP---LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKE 161
P+ R GL G + VP LPP+ LFV+ LP D + + IF F G++E
Sbjct: 143 PAKNARGAGLKSTGAGATAVVPDEYLPPN--RILFVQNLPDDFDKDALNAIFGRFEGFRE 200
Query: 162 VRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VR V PG + FV++ + A A TA + G
Sbjct: 201 VRTV------PGRSG--IAFVEYEAEAGAITAKENTAG 230
>gi|403224006|dbj|BAM42136.1| uncharacterized protein TOT_040000506 [Theileria orientalis strain
Shintoku]
Length = 760
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVS 186
P + + + V+ LP +++E++ +F+ + K VRL S + H G FV+F+S
Sbjct: 676 PTEENDVIIVKNLPFQATKKELSDLFKHYANVKTVRLPKSAGNTHRG-----FGFVEFMS 730
Query: 187 PAHAATAMDALQ 198
+ A TAM+ L+
Sbjct: 731 KSDAKTAMENLK 742
>gi|366992418|ref|XP_003675974.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
gi|342301840|emb|CCC69610.1| hypothetical protein NCAS_0D00290 [Naumovozyma castellii CBS 4309]
Length = 626
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + +E+ +F G++ + +K + G P +CFV+F + A
Sbjct: 516 NTLYVGNLPPDATEQELRQLFSSQEGFRRLSFRNKNTNGHGHGP--MCFVEFEDISFATR 573
Query: 193 AMDALQG 199
A+ L G
Sbjct: 574 ALAELYG 580
>gi|389600475|ref|XP_001562851.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504386|emb|CAM37284.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 943
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 123 SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE---SRHPGGDPLIL 179
SEVP P L V+ LP + + R+V +F F + VR+ K S H +
Sbjct: 848 SEVP-PGSDPQKLIVKNLPFEATERDVRELFSAFSEIRSVRVPRKSHTFSSHRENNHRGF 906
Query: 180 CFVDFVSPAHAATAMDALQ 198
FV+F+S AA A++ L+
Sbjct: 907 AFVEFLSEVEAARALETLK 925
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 9/92 (9%)
Query: 109 PSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
P A RA G RS S+TLF+ L DC+ + +F Y V VS
Sbjct: 317 PDANARANKFGDKRSA------PSNTLFIGNLSFDCTNETIQEVF---AEYGNVTRVSLP 367
Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
+ G +VDF S A A++AL GQ
Sbjct: 368 TDRDSGALKGFGYVDFGSQEEATAALEALHGQ 399
>gi|242003014|ref|XP_002422579.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
gi|212505369|gb|EEB09841.1| squamous cell carcinoma antigen, putative [Pediculus humanus
corporis]
Length = 858
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFV GLP + ++ +F F K+VRLV+ + H G L +V+F A AA A+
Sbjct: 698 LFVRGLPFSTTVEDLKTLFSKFGSLKDVRLVTYRNGHSKG----LAYVEFEDEASAAQAV 753
Query: 195 DALQGQS 201
+ G +
Sbjct: 754 LSTDGTT 760
>gi|357017693|gb|AET50875.1| hypothetical protein [Eimeria tenella]
Length = 415
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 11/74 (14%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL----VSKESRHPGGDPLILCFVDFVSP 187
+ TL++ LP C E+ IF K+ R+ VS+ESR F+ FV P
Sbjct: 105 TDTLYISNLPLRCGALELRRIFEEVGEVKDCRIVNNPVSRESRG-------FAFLSFVDP 157
Query: 188 AHAATAMDALQGQS 201
+HAA A++ ++
Sbjct: 158 SHAAVAIEHFDNKT 171
>gi|168015560|ref|XP_001760318.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688332|gb|EDQ74709.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 878
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGDPLILCFVDFVSPA 188
++S+ + V + + +R+++ IF PF K +RL K + H G FV+F++
Sbjct: 753 ESSTKIIVRNVAFEATRKDLQQIFNPFGQIKSIRLPKKFDGNHRG-----FAFVEFLTKK 807
Query: 189 HAATAMDALQ 198
A A +ALQ
Sbjct: 808 EAQNAFEALQ 817
>gi|342319729|gb|EGU11676.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091]
Length = 3850
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 125 VPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
+P+P + STL+V LPS + ++ F P+ V L S+ + + + F
Sbjct: 173 IPVPANPRSTLYVTQLPSSVTETDLRATFSPYGNLIRVSLRSQSA--------VFAHIVF 224
Query: 185 VSPAHAATAMDALQGQSNIIC 205
SP A +A++AL G+ +
Sbjct: 225 SSPYEALSALEALDGRQPTLL 245
>gi|296412291|ref|XP_002835858.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629654|emb|CAZ80015.1| unnamed protein product [Tuber melanosporum]
Length = 772
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
Query: 94 VDDPRIVGIG--GMDPGPSAKDRALGLGGGRSEVPLPPDA-SSTLFVEGLPSDCSRREVA 150
VD P+I G DP SA D L L S +A +STLFV+ L + ++
Sbjct: 511 VDAPKIPAAVALGKDPKVSATD--LLLPAHTSTATDEAEAGTSTLFVQNLNFTTTTAKLT 568
Query: 151 HIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAHAATAMDALQG 199
+F+P G+ R+ +K + ++PGG + F +F S AM AL G
Sbjct: 569 ELFKPINGFLSARVKTKPDPKNPGGTLSMGFGFAEFRSKTDGMAAMAALNG 619
>gi|302891485|ref|XP_003044624.1| hypothetical protein NECHADRAFT_100804 [Nectria haematococca mpVI
77-13-4]
gi|256725549|gb|EEU38911.1| hypothetical protein NECHADRAFT_100804 [Nectria haematococca mpVI
77-13-4]
Length = 243
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 87 GGMP-SRPVDDPRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCS 145
G P SRP R G+ K + GG + LPP+ LFV+ LP D
Sbjct: 134 GAAPDSRPAKTARPSGL---------KSTSAAAAGGVLDEFLPPN--KILFVQNLPEDYD 182
Query: 146 RREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQS 201
+ +F F G++EVRLV PG + FV++ + A TA + G S
Sbjct: 183 IEALTGVFGRFEGFREVRLV------PGRRG--IAFVEYEAEQGAITAKENTAGMS 230
>gi|85114567|ref|XP_964717.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
gi|28926509|gb|EAA35481.1| hypothetical protein NCU00556 [Neurospora crassa OR74A]
Length = 530
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK RL + ++H G +CFV+F + A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYK--RLCYR-TKHNG----PMCFVEFEDVSFATK 399
Query: 193 AMDALQGQS 201
A++ L G +
Sbjct: 400 ALNELYGHT 408
>gi|145228995|ref|XP_001388806.1| multiple RNA-binding domain-containing protein 1 [Aspergillus niger
CBS 513.88]
gi|134054902|emb|CAK36914.1| unnamed protein product [Aspergillus niger]
gi|350638000|gb|EHA26356.1| multiple RNA-binding domain-containing protein [Aspergillus niger
ATCC 1015]
Length = 825
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAH 189
++TLFV+ L + + +FRP G+ ++ +K + +HPG + FV+F S A
Sbjct: 596 TTTLFVKNLNFATTNQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQ 655
Query: 190 AATAMDALQG 199
A +A+ A+ G
Sbjct: 656 AQSALAAMNG 665
>gi|326532978|dbj|BAJ89334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 122 RSEVPLPP-DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
R+E PP D TLF+ GLP+D REV ++FR F GY + S +S
Sbjct: 56 RAEPLAPPRDELRTLFIAGLPADVKPREVYNLFRDFPGYVSSHVRSGKS 104
>gi|296818279|ref|XP_002849476.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
gi|238839929|gb|EEQ29591.1| multiple RNA-binding domain-containing protein 1 [Arthroderma otae
CBS 113480]
Length = 808
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL-- 179
R++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L +
Sbjct: 571 RADEPEAPMESATLFVRNLNFITTDTGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 630
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+F S A A A+ AL G
Sbjct: 631 GFVEFKSRAQAEAALKALNG 650
>gi|19073946|ref|NP_584552.1| putative RNA-binding protein with some similarity to
polyadenylate-binding proteins [Encephalitozoon cuniculi
GB-M1]
gi|19068588|emb|CAD25056.1| putative RNA-binding protein with some similarity to
polyadenylate-binding proteins [Encephalitozoon cuniculi
GB-M1]
Length = 246
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
S LFV P S ++ IF PF K ++++ +P + ++F P A
Sbjct: 3 SKLFVSNFPESYSEESMSLIFNPFGEIKSIKILR--------EPRLFSIIEFQEPLDAKA 54
Query: 193 AMDALQGQ 200
AMD+L G+
Sbjct: 55 AMDSLGGR 62
>gi|336275323|ref|XP_003352414.1| hypothetical protein SMAC_01248 [Sordaria macrospora k-hell]
gi|380094302|emb|CCC07681.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 575
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK RL + ++H G +CFV+F + A
Sbjct: 392 NTLYVGNLPIDTSEEELKAVFSKVRGYK--RLCYR-TKHNG----PMCFVEFEDVSFATK 444
Query: 193 AMDALQGQS 201
A++ L G +
Sbjct: 445 ALNELYGHT 453
>gi|194743840|ref|XP_001954408.1| GF16747 [Drosophila ananassae]
gi|190627445|gb|EDV42969.1| GF16747 [Drosophila ananassae]
Length = 141
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 87
Query: 194 MDALQG 199
LQG
Sbjct: 88 KQDLQG 93
>gi|313236302|emb|CBY11622.1| unnamed protein product [Oikopleura dioica]
Length = 161
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++T++VE LP + + + +F F G+K+ R V P G FV+F A
Sbjct: 87 AATIYVENLPDEANESMLNLLFSQFPGFKKSRPV------PSGGK---AFVEFADAGAAT 137
Query: 192 TAMDALQG 199
+A DALQG
Sbjct: 138 SAKDALQG 145
>gi|401825697|ref|XP_003886943.1| RNA-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392998100|gb|AFM97962.1| RNA-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 173
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
P ++ TL + +PS ++ ++ IFR F G + +R + +S L F+DF +P
Sbjct: 95 PIVSTRTLLITDIPSPVTKGDIEDIFRGFGGLEGIRFIGVKS---------LAFIDFSTP 145
Query: 188 AHAATA 193
A+TA
Sbjct: 146 EDASTA 151
>gi|336465288|gb|EGO53528.1| hypothetical protein NEUTE1DRAFT_92899 [Neurospora tetrasperma FGSC
2508]
gi|350295585|gb|EGZ76562.1| hypothetical protein NEUTE2DRAFT_98501 [Neurospora tetrasperma FGSC
2509]
Length = 530
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK RL + ++H G +CFV+F + A
Sbjct: 347 NTLYVGNLPIDTSEEELKAVFSKVRGYK--RLCYR-TKHNG----PMCFVEFEDVSFATK 399
Query: 193 AMDALQGQS 201
A++ L G +
Sbjct: 400 ALNELYGHT 408
>gi|378731298|gb|EHY57757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 763
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 66/171 (38%), Gaps = 18/171 (10%)
Query: 33 PSGHELSSYY-TRDDDRGALRGMRDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPS 91
PS H ++S T D A R DTD L R L + GQ + P
Sbjct: 155 PSDHVMTSENNTMDVAEDAPRS--DTDWLRGKTSRLLDLVE----QEGQDSHTALDNAPV 208
Query: 92 RPVDDPRIV--GIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREV 149
P +V G D A A G + V +P ++ LF+ LP D ++
Sbjct: 209 TNETVPHVVEDAAGSED---KANSDAEARTGSTATVSIP---NARLFIRNLPFDAKEGDL 262
Query: 150 AHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
F PF EV +V+ + G L +V FV PA A A+ L G+
Sbjct: 263 RKTFAPFGRVSEVHIVTDTRKLTGKG---LAYVQFVEPADAEKALLELDGR 310
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 15/117 (12%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P + GG R D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPRGR-----FGGSRDS-----DLPTSLLVRNLRHDCRQEDLRRPFEQF 60
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + GDP F+ F+ PA AA A + G ++ L V +
Sbjct: 61 GPVKDIYLPRD---YYTGDPRGFGFIQFMDPADAAEAKHQMDGY--LLLGRELTVVF 112
>gi|432874009|ref|XP_004072427.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 2 [Oryzias latipes]
Length = 923
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C++ ++ I + K+VRLV+ S P G L +V+F A+ A+
Sbjct: 763 IFISGLPLSCTKEQLEEICKQQGTVKDVRLVTYRSGRPKG----LAYVEFADETQASQAV 818
Query: 195 DALQG 199
+ G
Sbjct: 819 LKMDG 823
>gi|146422677|ref|XP_001487274.1| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG S+ + ++ + ++ LP + +R++V +F F K VR+ K + G
Sbjct: 743 GGASKT----NKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARG----F 794
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+FV A AMD L+G
Sbjct: 795 AFVEFVLLKEAENAMDQLEG 814
>gi|15231331|ref|NP_187983.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641879|gb|AEE75400.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 296
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 13/84 (15%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL--------VSKESRH-----PGGD 175
P A +TLFV GLP+D RE+ ++FR G++ +L V K + P
Sbjct: 33 PGAINTLFVSGLPNDVKAREIHNLFRRRHGFESCQLKYTGRGDQVCKNLQFLFFFIPIFR 92
Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
++ F F S A AM+ L G
Sbjct: 93 KAVVAFATFTSHRFALAAMNELNG 116
>gi|432874007|ref|XP_004072426.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like isoform 1 [Oryzias latipes]
Length = 941
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
+F+ GLP C++ ++ I + K+VRLV+ S P G L +V+F A+ A+
Sbjct: 781 IFISGLPLSCTKEQLEEICKQQGTVKDVRLVTYRSGRPKG----LAYVEFADETQASQAV 836
Query: 195 DALQG 199
+ G
Sbjct: 837 LKMDG 841
>gi|242763791|ref|XP_002340645.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces
stipitatus ATCC 10500]
gi|218723841|gb|EED23258.1| U1 small nuclear ribonucleoprotein, putative [Talaromyces
stipitatus ATCC 10500]
Length = 254
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF+ LP D +A IF F G++EVRLV PG + FV++ +
Sbjct: 175 LPPN--KILFLRELPEDADSDMLAGIFGRFEGFREVRLV------PGRKG--IAFVEYEN 224
Query: 187 PAHAATAMDALQG 199
A A +A +A G
Sbjct: 225 EAGAISAKEATSG 237
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 15/117 (12%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P + GG R D ++L V L DC + ++ F F
Sbjct: 11 PRGYGRRGRSPSPRGR-----FGGSRDS-----DLPTSLLVRNLRHDCRQEDLRRPFEQF 60
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + GDP F+ F+ PA AA A + G ++ L V +
Sbjct: 61 GPVKDIYLPRD---YYTGDPRGFGFIQFMDPADAAEAKHQMDGY--LLLGRELTVVF 112
>gi|358372076|dbj|GAA88681.1| pre-rRNA processing protein Mrd1 [Aspergillus kawachii IFO 4308]
Length = 825
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPAH 189
++TLFV+ L + + +FRP G+ ++ +K + +HPG + FV+F S A
Sbjct: 596 TTTLFVKNLNFATTTQSFVDLFRPLDGFVSAKIKTKPDPKHPGQTLSMGFGFVEFRSKAQ 655
Query: 190 AATAMDALQG 199
A +A+ A+ G
Sbjct: 656 AQSALAAMNG 665
>gi|218197597|gb|EEC80024.1| hypothetical protein OsI_21699 [Oryza sativa Indica Group]
Length = 315
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP STLFV L C+ E+ + G+ +++ R GG P+ F DF
Sbjct: 229 IPP--CSTLFVANLGHSCTEEELKEVLSKQPGFHLLKM-----RRRGGMPV--AFADFTD 279
Query: 187 PAHAATAMDALQG 199
+ AMDALQG
Sbjct: 280 IESSTAAMDALQG 292
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +F G+ L + G ++ FV FV+ A +A
Sbjct: 33 TLFVAGLPDDVKPREIHKLFSSRPGFDHCLL-----EYTGRGNQVVAFVSFVNHQAALSA 87
Query: 194 MDALQ 198
M AL
Sbjct: 88 MSALN 92
>gi|449329308|gb|AGE95581.1| putative RNA-binding protein [Encephalitozoon cuniculi]
Length = 246
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
S LFV P S ++ IF PF K ++++ +P + ++F P A
Sbjct: 3 SKLFVSNFPESYSEESMSLIFSPFGEIKSIKILR--------EPRLFSIIEFQEPLDAKA 54
Query: 193 AMDALQGQ 200
AMD+L G+
Sbjct: 55 AMDSLGGR 62
>gi|396480635|ref|XP_003841040.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
gi|312217614|emb|CBX97561.1| similar to multiple RNA-binding domain containing protein 1
[Leptosphaeria maculans JN3]
Length = 831
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCF 181
R E L AS+ + ++ LP + S++EV +F P+ + VR+ K G F
Sbjct: 696 RREDALKKAASTKILIKNLPFEASKKEVRALFTPYGQLRSVRVPKKFDSSSRG----FGF 751
Query: 182 VDFVSPAHAATAMDALQ 198
+F + A AM+AL+
Sbjct: 752 AEFTTKRDALNAMNALK 768
>gi|239614479|gb|EEQ91466.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
Length = 1294
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 110 SAKDRALGLGGGRSEVPLPPD-ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS-K 167
S + RA LG P D ++T+ VE LPSD + V FR + ++R S K
Sbjct: 840 SKRPRAADLGADAGTPPPKRDRENATVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLK 899
Query: 168 ESRHPGGDPLILCFVDF--VSPAHAATAMDALQGQ 200
+ H C+V F S AHAAT ++ Q +
Sbjct: 900 YNTHRR-----FCYVQFQTASAAHAATELNGTQQE 929
>gi|222634965|gb|EEE65097.1| hypothetical protein OsJ_20145 [Oryza sativa Japonica Group]
Length = 315
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ ++F G+ L + G ++ FV FV+ A +A
Sbjct: 33 TLFVAGLPDDVKPREIHNLFSSRPGFDHCLL-----EYTGRGNQVVAFVSFVNHQAALSA 87
Query: 194 MDALQ 198
M AL
Sbjct: 88 MSALN 92
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
+PP STLFV L C+ E+ + G+ +++ R GG P+ F DF
Sbjct: 229 IPP--CSTLFVANLGHSCTEEELKEVLSKQPGFHLLKM-----RRRGGMPV--AFADFTD 279
Query: 187 PAHAATAMDALQG 199
+ AMDALQG
Sbjct: 280 IESSTAAMDALQG 292
>gi|261195985|ref|XP_002624396.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239587529|gb|EEQ70172.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
Length = 1294
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 110 SAKDRALGLGGGRSEVPLPPD-ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS-K 167
S + RA LG P D ++T+ VE LPSD + V FR + ++R S K
Sbjct: 840 SKRPRAADLGADAGTPPPKRDRENATVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLK 899
Query: 168 ESRHPGGDPLILCFVDF--VSPAHAATAMDALQGQ 200
+ H C+V F S AHAAT ++ Q +
Sbjct: 900 YNTHRR-----FCYVQFQTASAAHAATELNGTQQE 929
>gi|190344798|gb|EDK36553.2| hypothetical protein PGUG_00651 [Meyerozyma guilliermondii ATCC
6260]
Length = 876
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG S+ + ++ + ++ LP + +R++V +F F K VR+ K + G
Sbjct: 743 GGASKT----NKTNKIIIKNLPFEATRKDVLELFGAFGQLKSVRVPKKFDKSARG----F 794
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+FV A AMD L+G
Sbjct: 795 AFVEFVLLKEAENAMDQLEG 814
>gi|294658856|ref|XP_461195.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
gi|202953439|emb|CAG89583.2| DEHA2F19514p [Debaryomyces hansenii CBS767]
Length = 529
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI------LCFVDFVS 186
+TL+V LP D + E+ +F P G++ + +K + +CFV+F
Sbjct: 393 NTLYVGNLPPDATESELRALFSPQKGFRRLSFRTKNQSSSNPNQSSNHNHGPMCFVEFED 452
Query: 187 PAHAATAMDALQGQS 201
AHA A+ L G++
Sbjct: 453 VAHATRALAELYGRT 467
>gi|195157804|ref|XP_002019784.1| GL12579 [Drosophila persimilis]
gi|194116375|gb|EDW38418.1| GL12579 [Drosophila persimilis]
Length = 632
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 469 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 526
Query: 194 MDALQG 199
LQG
Sbjct: 527 KQDLQG 532
>gi|159473631|ref|XP_001694937.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276316|gb|EDP02089.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1623
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
L++ +P + + E+ +F F + VR+ + CFV+FV P HAA A
Sbjct: 837 LWLGNIPHNVDKAELEALFSRFGPLESVRVFPDRN---------FCFVNFVLPQHAAAAR 887
Query: 195 DALQGQ--SNIICLSNLVVFYQ 214
AL GQ ++ L V YQ
Sbjct: 888 LALDGQPAPSVTGARPLFVRYQ 909
>gi|384499199|gb|EIE89690.1| hypothetical protein RO3G_14401 [Rhizopus delemar RA 99-880]
Length = 400
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 104 GMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVR 163
+DP A L G S P+P D + T+FV G P D RE ++F G++
Sbjct: 13 AIDPSSPTLSAAQSLFSGTS--PVPEDVT-TIFVVGFPDDMQEREFQNMFLFSKGFEGAS 69
Query: 164 L----VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
L E + ++ F F + + A A+D L G+
Sbjct: 70 LKWHCKQDEETNENNKKQMIGFARFATRSEAIEAVDVLNGR 110
>gi|384498171|gb|EIE88662.1| hypothetical protein RO3G_13373 [Rhizopus delemar RA 99-880]
Length = 464
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D + E+ +F GYK + +K S P +CFV+F AA
Sbjct: 380 NTLYVGNLPPDANEEELKSMFSKCAGYKRLSFRNK-SNGP------MCFVEFEDAIFAAQ 432
Query: 193 AMDALQGQ 200
A+ L G
Sbjct: 433 ALQDLHGN 440
>gi|378726702|gb|EHY53161.1| U2 small nuclear ribonucleoprotein B'' [Exophiala dermatitidis
NIH/UT8656]
Length = 256
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 10/73 (13%)
Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
LPP+ LF+ LP ++ IF F G+KEVR+V PG + FV++ S
Sbjct: 177 LPPN--KILFIRDLPDSYDADGLSRIFSRFEGFKEVRMV------PGRKG--IAFVEYES 226
Query: 187 PAHAATAMDALQG 199
A A +A +A G
Sbjct: 227 EAGAISAKEATAG 239
>gi|258567630|ref|XP_002584559.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237906005|gb|EEP80406.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1150
Score = 37.7 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 13/101 (12%)
Query: 106 DPGPSAKDRALGLG-GGRSEVPLPPD----ASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
D P+ R GL G + P+ PD + LF+ +P + IF F G+K
Sbjct: 1043 DTRPAKTTRGAGLKPTGAAAAPVIPDEYLPPNKILFLREVPDSYDSAGLTAIFGRFEGFK 1102
Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQS 201
EVR+V PG + FV++ S A A +A +A G +
Sbjct: 1103 EVRMV------PGRKG--IAFVEYESEAGAISAKEATSGMT 1135
>gi|50288333|ref|XP_446595.1| hypothetical protein [Candida glabrata CBS 138]
gi|42557534|emb|CAE84437.1| putative Whi3 protein [Candida glabrata]
gi|49525903|emb|CAG59522.1| unnamed protein product [Candida glabrata]
Length = 671
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LPSD + +E+ +F G++ + +K + G +CFV+F + A
Sbjct: 544 NTLYVGNLPSDATEQELRQLFSNQFGFRRLSFRNKNANGTGHGHGPMCFVEFDDVSCATR 603
Query: 193 AMDALQG 199
A+ L G
Sbjct: 604 ALVELYG 610
>gi|45185072|ref|NP_982789.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|44980708|gb|AAS50613.1| ABL158Cp [Ashbya gossypii ATCC 10895]
gi|374105991|gb|AEY94901.1| FABL158Cp [Ashbya gossypii FDAG1]
Length = 729
Score = 37.7 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 16/106 (15%)
Query: 108 GPSAKDRALGLGGGRSEVPL------PPDAS--------STLFVEGLPSDCSRREVAHIF 153
GP AL G S+V L PP A+ +TL+V LP D + +E+ +F
Sbjct: 568 GPKNAAAALQNTNGISQVDLSLLAKVPPPANPADQNPPCNTLYVGNLPPDATEQELRQLF 627
Query: 154 RPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
G++ + +K + G P +CFV+F AHA A+ L G
Sbjct: 628 SSQKGFRRLSFRNKNNNGNGHGP--MCFVEFEDVAHATRALAELYG 671
>gi|242014736|ref|XP_002428041.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512560|gb|EEB15303.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 363
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 118 LGGGRSEVPLPPDASS---TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG 174
+ RS+ P+ S TLFV GLP D RE+ +FR + GY E L+ S++ G
Sbjct: 3 IASKRSQTKKKPEIYSDVRTLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GK 60
Query: 175 DPLILCFVDFVSPAHAATAMDALQG 199
+ FV F + A A A LQG
Sbjct: 61 TASPVGFVTFNTRAGAEAAKQDLQG 85
>gi|71029064|ref|XP_764175.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351129|gb|EAN31892.1| hypothetical protein TP04_0540 [Theileria parva]
Length = 486
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 18/121 (14%)
Query: 128 PPDAS-STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
PP+ + + +E +P + + ++ IF PF E L S+E PG L ++DFVS
Sbjct: 302 PPELNGKRVVLENVPFELAASDIRRIFEPFGNITECVLYSRE-MLPGA-FFALGYIDFVS 359
Query: 187 PAHAATAMDALQG--------------QSNIICLSNLVVFYQIACEYISDK-ICVHIKFL 231
A T + G +S+++ SN++V Y + ++D+ + +K
Sbjct: 360 ANVAQTVCSTMNGFEIAGSKIQVTLAPESSVVGTSNVIVIYNMVDPKLADENLANEVKVE 419
Query: 232 C 232
C
Sbjct: 420 C 420
>gi|326485490|gb|EGE09500.1| pre-rRNA processing protein Mrd1 [Trichophyton equinum CBS 127.97]
Length = 835
Score = 37.7 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL-- 179
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L +
Sbjct: 598 KADEPEAPMESATLFVRNLNFTTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 657
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+F S A A A+ AL G
Sbjct: 658 GFVEFKSRAQAEAALKALNG 677
>gi|326437182|gb|EGD82752.1| hypothetical protein PTSG_03403 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 37.7 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 121 GRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE---SRHPGGDPL 177
R E L A++ + V + + +++++ +F P+ K VRL K ++H G
Sbjct: 898 ARREGKLIKGATTKVVVRNVAFEATKKDIRQLFTPYGDVKSVRLPPKSFDPTQHRG---- 953
Query: 178 ILCFVDFVSPAHAATAMDALQGQSNI 203
FV+F S A +A +AL G +++
Sbjct: 954 -FAFVEFSSKEEAKSAFEALSGSTHL 978
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 119 GGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI 178
G G + V L AS+T+FV+ L + + ++F+ + R+ +K++ H + L
Sbjct: 792 GQGEAAVELESTASTTVFVKNLNFETGDNALYNLFQTCGTIRSCRVATKKNPHNPQELLS 851
Query: 179 LCF--VDFVSPAHAATAMDALQG 199
+ F V+F + A A AM LQG
Sbjct: 852 MGFGFVEFKTHAEAVKAMKKLQG 874
>gi|195055450|ref|XP_001994632.1| GH15012 [Drosophila grimshawi]
gi|193892395|gb|EDV91261.1| GH15012 [Drosophila grimshawi]
Length = 193
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 30 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 87
Query: 194 MDALQG 199
LQG
Sbjct: 88 KQDLQG 93
>gi|255731644|ref|XP_002550746.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131755|gb|EER31314.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 665
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES---------RHPGGDPLILCFVD 183
+TL+V LP D + E+ +F P G++ + +K H G +CFV+
Sbjct: 523 NTLYVGNLPPDATEAELRTLFSPQKGFRRLSFRTKNQSSTNGSGSTSHNHGP---MCFVE 579
Query: 184 FVSPAHAATAMDALQG 199
F AHA A+ L G
Sbjct: 580 FEDVAHATRALAELYG 595
>gi|148909446|gb|ABR17821.1| unknown [Picea sitchensis]
Length = 302
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV L C+ E+ + F G+K ++L +K GG P + FVDF +A A
Sbjct: 199 TLFVANLGPTCTEGELREVLSRFQGFKMLKLQTK-----GGMP--VAFVDFEDVTSSAEA 251
Query: 194 MDALQ 198
+ LQ
Sbjct: 252 LKQLQ 256
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLF+ GLP D RE+ ++FR G++ +L ++ G I+ F F A A
Sbjct: 37 TLFISGLPEDIKHREIYNLFRRRPGFEACQL-----KYTGRGYQIVAFAVFSHHQLALAA 91
Query: 194 MDALQG 199
D L G
Sbjct: 92 KDVLNG 97
>gi|313232389|emb|CBY24056.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 9/70 (12%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV-SKESRHPGGDPLILCFVDFVSPAH 189
+++ +FV+ LP + + + +F F + EVR+ SK R F+++ +
Sbjct: 240 SNNIIFVQDLPEEVDEKMLTALFNQFDNFMEVRMAPSKTGRA--------AFIEYTNERS 291
Query: 190 AATAMDALQG 199
AA A D LQG
Sbjct: 292 AANAKDTLQG 301
>gi|350632868|gb|EHA21235.1| hypothetical protein ASPNIDRAFT_54716 [Aspergillus niger ATCC 1015]
Length = 611
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDDVGTAGK 458
Query: 193 AMDALQGQSNIICLSNLV 210
A++ L G + LSN +
Sbjct: 459 ALNELYG----VKLSNSI 472
>gi|145235395|ref|XP_001390346.1| RNA binding protein [Aspergillus niger CBS 513.88]
gi|134058028|emb|CAK38257.1| unnamed protein product [Aspergillus niger]
Length = 611
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F A
Sbjct: 406 NTLYVGNLPPDTSEEELKALFSKQRGYKRLCFRNKQNGP-------MCFVEFDDVGTAGK 458
Query: 193 AMDALQGQSNIICLSNLV 210
A++ L G + LSN +
Sbjct: 459 ALNELYG----VKLSNSI 472
>gi|449018190|dbj|BAM81592.1| probable RNA binding protein Mrd1p [Cyanidioschyzon merolae strain
10D]
Length = 815
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 123 SEVPLPPDA--SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILC 180
SE + P+A + L ++ + + S+RE+ +F F K +RL K G C
Sbjct: 726 SETAVVPEAGNETKLIIKNIAFEASKRELHQLFSSFGHVKSLRLPKK----VDGSGRGFC 781
Query: 181 FVDFVSPAHAATAMDALQG 199
FV++ +P A A +QG
Sbjct: 782 FVEYATPQETARATALVQG 800
>gi|399215899|emb|CCF72587.1| unnamed protein product [Babesia microti strain RI]
Length = 291
Score = 37.7 bits (86), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 11/79 (13%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
LFVE LP D + V+ +F G+ E R+++ + FVDF S A A+
Sbjct: 221 LFVENLPPDVNPAIVSTLFGQRPGFIESRVIASRC---------VAFVDFDSEQSAGLAL 271
Query: 195 DALQGQSNIICLSNLVVFY 213
ALQG S I +N+ + Y
Sbjct: 272 KALQGHS--ILGNNIYISY 288
>gi|121711603|ref|XP_001273417.1| ribonucleoprotein, putative [Aspergillus clavatus NRRL 1]
gi|119401568|gb|EAW11991.1| ribonucleoprotein, putative [Aspergillus clavatus NRRL 1]
Length = 329
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Query: 122 RSEVPLPP----DASSTLFVEGLPSDCSRREVA-HIFRPFVGYKEVRLVSK------ESR 170
R++ P P D S ++V GLP E+ I F GYK V VSK R
Sbjct: 195 RNDAPTFPKVNSDTSRRVYVGGLPKVIDTEEITTKITDFFKGYK-VENVSKLFTPHPAKR 253
Query: 171 HPGGDPLILCFVDFVSPAHAATAMDALQGQ 200
GD L FV+F S A TAMD L GQ
Sbjct: 254 FEAGDHYYL-FVEFSSVEEAQTAMDTLNGQ 282
>gi|330917653|ref|XP_003297901.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
gi|311329202|gb|EFQ94032.1| hypothetical protein PTT_08457 [Pyrenophora teres f. teres 0-1]
Length = 559
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 375 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 427
Query: 193 AMDALQG 199
A++ L G
Sbjct: 428 ALNELYG 434
>gi|260943586|ref|XP_002616091.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
gi|238849740|gb|EEQ39204.1| hypothetical protein CLUG_03332 [Clavispora lusitaniae ATCC 42720]
Length = 589
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES---------RHPGGDPLILCFVD 183
+TL+V LP D + E+ +F P G++ + +K H G +CFV+
Sbjct: 458 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSSSGSGSSGHNHGP---MCFVE 514
Query: 184 FVSPAHAATAMDALQGQS 201
F AHA A+ L G++
Sbjct: 515 FEDVAHATIALAELYGRA 532
>gi|195570023|ref|XP_002103008.1| GD19192 [Drosophila simulans]
gi|194198935|gb|EDX12511.1| GD19192 [Drosophila simulans]
Length = 221
Score = 37.4 bits (85), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 58 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 115
Query: 194 MDALQG 199
LQG
Sbjct: 116 KQDLQG 121
>gi|340382975|ref|XP_003389993.1| PREDICTED: probable RNA-binding protein 19-like [Amphimedon
queenslandica]
Length = 866
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 108 GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
PS D A ++ +P + + + +P + SR+E++ + F K +RL K
Sbjct: 723 APSVSDAASATSHKVTKSLMPKGPKNKILIRNVPFEASRKELSQLLSTFGKIKNLRLPKK 782
Query: 168 ESR---HPGGDPLILCFVDFVSPAHAATAMDALQGQSNI 203
++ H G CFV++ + A +A ++L +++
Sbjct: 783 QNEPNSHRG-----FCFVEYSTTEDARSAFESLADSTHL 816
>gi|452000412|gb|EMD92873.1| hypothetical protein COCHEDRAFT_1223605 [Cochliobolus
heterostrophus C5]
Length = 561
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 429
Query: 193 AMDALQG 199
A++ L G
Sbjct: 430 ALNELYG 436
>gi|453085210|gb|EMF13253.1| hypothetical protein SEPMUDRAFT_148613 [Mycosphaerella populorum
SO2202]
Length = 568
Score = 37.4 bits (85), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K H G +CFV+F + A
Sbjct: 375 NTLYVGNLPVDTSEDELKALFSKVRGYKRLCFRTK---HQGS----MCFVEFEDVSFATK 427
Query: 193 AMDALQG 199
A++ L G
Sbjct: 428 ALNELYG 434
>gi|198470219|ref|XP_002133396.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
gi|198145347|gb|EDY72024.1| GA22839 [Drosophila pseudoobscura pseudoobscura]
Length = 927
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK----ESRHPGGDPL 177
R + + + V +P REV +F+ F + +R+ K E H G
Sbjct: 774 RGQAAQKKQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRG---- 829
Query: 178 ILCFVDFVSPAHAATAMDALQGQSNI 203
FVDF++ A A A DAL +++
Sbjct: 830 -FGFVDFITKADAKRAFDALSASTHL 854
>gi|167517425|ref|XP_001743053.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778152|gb|EDQ91767.1| predicted protein [Monosiga brevicollis MX1]
Length = 1117
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 10/78 (12%)
Query: 126 PLPPD-----ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLIL 179
PL P+ S LFV LP C E+ +F F E+ + + E++ P G
Sbjct: 527 PLRPEDEDIGESGRLFVRNLPYACREDELRELFEAFGPLSELHMPIDGETKKPKG----F 582
Query: 180 CFVDFVSPAHAATAMDAL 197
F+ FV P HA+ A L
Sbjct: 583 AFITFVLPEHASQAFQNL 600
>gi|359067200|ref|XP_003586320.1| PREDICTED: CUGBP, Elav-like family member 5 [Bos taurus]
Length = 685
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 115 ALGLGGGR-------SEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK 167
AL LG G +EV PP LFV L S +V +F+PF E ++
Sbjct: 309 ALELGAGHLEAAADLAEVVFPPTGDRKLFVGMLNKQQSEEDVLRLFQPFGVIDECTVL-- 366
Query: 168 ESRHPGGDPLILCFVDFVSPAHAATAMDALQG-QSNIICLSNLVVFY 213
R P G FV F S A A+ AL G Q+ S+LVV +
Sbjct: 367 --RGPDGSSKGCAFVKFSSHTEAQAAIHALHGSQTMPGASSSLVVKF 411
>gi|17508419|ref|NP_492508.1| Protein MEC-8 [Caenorhabditis elegans]
gi|1369981|emb|CAA64867.1| mec-8 [Caenorhabditis elegans]
gi|3877217|emb|CAB03111.1| Protein MEC-8 [Caenorhabditis elegans]
Length = 312
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P TLFV GLP D RE+ +FR GY+ L K + G + FV F+S
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALL--KMTSKNGKPTSPVGFVTFLSQQ 84
Query: 189 HAATAMDALQG 199
A A LQG
Sbjct: 85 DAQDARKMLQG 95
>gi|195348983|ref|XP_002041026.1| GM15269 [Drosophila sechellia]
gi|194122631|gb|EDW44674.1| GM15269 [Drosophila sechellia]
Length = 617
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 454 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 511
Query: 194 MDALQG 199
LQG
Sbjct: 512 KQDLQG 517
>gi|189188620|ref|XP_001930649.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972255|gb|EDU39754.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 561
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 377 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 429
Query: 193 AMDALQG 199
A++ L G
Sbjct: 430 ALNELYG 436
>gi|225435731|ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 14/117 (11%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G G P P + R G G R D ++L V L DC ++ F F
Sbjct: 11 PRGYGRRGRSPSP--RGRYGGRGSAR-------DLPTSLLVRNLRHDCRGEDLRRPFGQF 61
Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
K++ L + G+P FV +V PA AA A + GQ I+ L V +
Sbjct: 62 GPLKDIYLPRD---YYTGEPRGFGFVQYVDPADAAEAKYQMDGQ--ILHGRELTVVF 113
>gi|391335607|ref|XP_003742181.1| PREDICTED: probable RNA-binding protein 19-like [Metaseiulus
occidentalis]
Length = 836
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
AS+ + V +P +R+E+ +F F K VRL K G FV+F++ + A
Sbjct: 713 ASTKILVRNVPFQANRKEIFELFAVFGELKTVRLPKKMFGGDSGSHRGFAFVEFITKSDA 772
Query: 191 ATAMDAL 197
A D+L
Sbjct: 773 KRAFDSL 779
>gi|195175692|ref|XP_002028560.1| GL16640 [Drosophila persimilis]
gi|194104901|gb|EDW26944.1| GL16640 [Drosophila persimilis]
Length = 928
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK----ESRHPGGDPL 177
R + + + V +P REV +F+ F + +R+ K E H G
Sbjct: 775 RGQAAQKKQTGTKILVRNIPFQAQYREVLEVFKAFGELRSLRIPKKVTAGEDAHRG---- 830
Query: 178 ILCFVDFVSPAHAATAMDALQGQSNI 203
FVDF++ A A A DAL +++
Sbjct: 831 -FGFVDFITKADAKRAFDALSASTHL 855
>gi|315041593|ref|XP_003170173.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
gi|311345207|gb|EFR04410.1| multiple RNA-binding domain-containing protein 1 [Arthroderma
gypseum CBS 118893]
Length = 799
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL-- 179
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L +
Sbjct: 562 KADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 621
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+F S A A A+ AL G
Sbjct: 622 GFVEFKSRAQAEAALKALNG 641
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
gi|222850991|gb|EEE88538.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
S +L V +P DC E+ +F F ++V + K+ + G+P FV FV P+ A
Sbjct: 43 SGSLLVRNIPRDCRPEELRGMFERFGVVRDV-YIPKD--YHTGEPRGFGFVQFVEPSDAM 99
Query: 192 TAMDALQGQSNIICLSNLVVFYQIACE 218
A + GQ + +F +A E
Sbjct: 100 EAQHHMNGQ----VFAGRQMFVVVAAE 122
>gi|1370048|emb|CAA64866.1| mec-8 [Caenorhabditis elegans]
Length = 312
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPA 188
P TLFV GLP D RE+ +FR GY+ L K + G + FV F+S
Sbjct: 27 PSQVRTLFVSGLPMDAKPRELYLLFRGCRGYEGALL--KMTSKNGKPTSPVGFVTFLSQQ 84
Query: 189 HAATAMDALQG 199
A A LQG
Sbjct: 85 DAQDARKMLQG 95
>gi|302507734|ref|XP_003015828.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
gi|291179396|gb|EFE35183.1| hypothetical protein ARB_06140 [Arthroderma benhamiae CBS 112371]
Length = 826
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL-- 179
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L +
Sbjct: 589 KADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 648
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+F S A A A+ AL G
Sbjct: 649 GFVEFKSRAQAEAALKALNG 668
>gi|1345457|emb|CAA78696.1| Cpo 61.1 [Drosophila melanogaster]
Length = 615
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 452 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 509
Query: 194 MDALQG 199
LQG
Sbjct: 510 KQDLQG 515
>gi|302660785|ref|XP_003022068.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
gi|291185995|gb|EFE41450.1| hypothetical protein TRV_03809 [Trichophyton verrucosum HKI 0517]
Length = 968
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL-- 179
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L +
Sbjct: 731 KADEPEAPMESATLFVRNLNFITTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 790
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+F S A A A+ AL G
Sbjct: 791 GFVEFKSRAQAEAALKALNG 810
>gi|389743141|gb|EIM84326.1| hypothetical protein STEHIDRAFT_170049 [Stereum hirsutum FP-91666
SS1]
Length = 779
Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAHA 190
++ LFV L C+ E+ +FRPF ++ + + +++ P G L +V FV P A
Sbjct: 241 TARLFVRNLAFACTEDELRELFRPFGEISQIHIPIDPKTKQPKG----LAYVSFVQPTAA 296
Query: 191 ATAMDALQGQS 201
A + L +S
Sbjct: 297 LAAYETLDRKS 307
>gi|453081177|gb|EMF09226.1| small nuclear ribonucleo protein U [Mycosphaerella populorum
SO2202]
Length = 236
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
L + LPSD ++ V +F+ F G KEVR+V PG L F ++ AA A
Sbjct: 164 LILRDLPSDYTKEAVTAVFQRFPGLKEVRMV------PGRSG--LAFAEYNDEIEAAVAR 215
Query: 195 DALQG 199
+A+ G
Sbjct: 216 EAMHG 220
>gi|322701438|gb|EFY93188.1| hypothetical protein MAC_00971 [Metarhizium acridum CQMa 102]
Length = 567
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 377 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 429
Query: 193 AMDALQGQ 200
A+ L GQ
Sbjct: 430 ALHELYGQ 437
>gi|327298413|ref|XP_003233900.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
gi|326464078|gb|EGD89531.1| multiple RNA-binding domain-containing protein [Trichophyton rubrum
CBS 118892]
Length = 798
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL-- 179
+++ P P S+TLFV L + ++ +FRP G+ ++ ++ G+ L +
Sbjct: 561 KADEPEAPMESATLFVRNLNFVTTDAGLSDLFRPLDGFISAQVKTRPDPKKPGERLSMGF 620
Query: 180 CFVDFVSPAHAATAMDALQG 199
FV+F S A A A+ AL G
Sbjct: 621 GFVEFKSRAQAEAALKALNG 640
>gi|50546647|ref|XP_500793.1| YALI0B12276p [Yarrowia lipolytica]
gi|74689812|sp|Q6CEW9.1|MRD1_YARLI RecName: Full=Multiple RNA-binding domain-containing protein 1
gi|49646659|emb|CAG83044.1| YALI0B12276p [Yarrowia lipolytica CLIB122]
Length = 828
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
S + ++ LP + ++++V +F F K VR+ K + G F ++VS A
Sbjct: 703 SKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRG----FAFAEYVSAKEAEH 758
Query: 193 AMDALQG 199
AM ALQG
Sbjct: 759 AMSALQG 765
>gi|356521751|ref|XP_003529515.1| PREDICTED: uncharacterized protein LOC100797865 [Glycine max]
Length = 320
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
T+F+ GLP D RE+ ++ R G++ +L K + G F F +P A A
Sbjct: 40 TIFITGLPEDVKERELQNLLRWLPGFEASQLNFKAEKPMG-------FALFSAPHQALAA 92
Query: 194 MDALQ 198
D LQ
Sbjct: 93 KDILQ 97
>gi|322709618|gb|EFZ01194.1| RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 564
Score = 37.0 bits (84), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 375 NTLYVGNLPIDTSEEELKAMFSKQRGYKRLCFRTKQNG-------PMCFVEFEDVSFATK 427
Query: 193 AMDALQGQ 200
A+ L GQ
Sbjct: 428 ALHELYGQ 435
>gi|442619711|ref|NP_732284.5| couch potato, isoform N [Drosophila melanogaster]
gi|442619725|ref|NP_732283.5| couch potato, isoform U [Drosophila melanogaster]
gi|442619729|ref|NP_001262691.1| couch potato, isoform W [Drosophila melanogaster]
gi|442619731|ref|NP_001262692.1| couch potato, isoform X [Drosophila melanogaster]
gi|442619733|ref|NP_524844.6| couch potato, isoform Y [Drosophila melanogaster]
gi|440217570|gb|AAF55484.6| couch potato, isoform N [Drosophila melanogaster]
gi|440217577|gb|AAF55485.6| couch potato, isoform U [Drosophila melanogaster]
gi|440217579|gb|AGB96071.1| couch potato, isoform W [Drosophila melanogaster]
gi|440217580|gb|AGB96072.1| couch potato, isoform X [Drosophila melanogaster]
gi|440217581|gb|AAN13754.5| couch potato, isoform Y [Drosophila melanogaster]
Length = 606
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY E L+ S++ G + FV F + A A A
Sbjct: 443 TLFVSGLPMDAKPRELYLLFRAYEGY-EGSLLKVTSKN-GKTASPVGFVTFHTRAGAEAA 500
Query: 194 MDALQG 199
LQG
Sbjct: 501 KQDLQG 506
>gi|19114339|ref|NP_593427.1| RNA-binding protein Mug28 [Schizosaccharomyces pombe 972h-]
gi|74698440|sp|Q9UT83.1|MUG28_SCHPO RecName: Full=Meiotically up-regulated gene 28 protein
gi|5706508|emb|CAB52270.1| RNA-binding protein Mug28 [Schizosaccharomyces pombe]
Length = 609
Score = 37.0 bits (84), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHP--GGDPLILCFVDFVSPAHAA 191
+++V LPS C ++ +F PF + + ++S++ P + F+ F + A
Sbjct: 21 SIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSAD 80
Query: 192 TAMDALQGQS 201
A+ +L G S
Sbjct: 81 NAIASLNGSS 90
>gi|427782383|gb|JAA56643.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 326
Score = 37.0 bits (84), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TLFV GLP D RE+ +FR + GY+ L K ++ G + FV F S A A A
Sbjct: 29 TLFVSGLPMDAKPRELYLLFRAYKGYEGSLL--KVTQKNGKTSSPVGFVTFSSRAGAEAA 86
Query: 194 MDALQ 198
LQ
Sbjct: 87 KQELQ 91
>gi|301095503|ref|XP_002896852.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108735|gb|EEY66787.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1158
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 55 RDTDSLGASYDRYLRSAQISSYSGGQSARHMSGGMPSRPVDDPRIVGIGGMDPGPSAKDR 114
R S+ R LR +++ S SGG S R + P++ D VG GG P DR
Sbjct: 947 RRKSSIAHVVTRVLRKSRLRSGSGGSSYRATT--TPNQYSD--FTVGSGGTQPVVMTNDR 1002
Query: 115 ALGLGGGRSE-VPLPPDASSTLFVEGLPSD----CSRR--EVAHIFR 154
L R E +P+ P + ST+F LPS+ R+ EVAH+ +
Sbjct: 1003 LSALAASRLELIPVEPVSISTIF--PLPSEDVYALQRKVYEVAHLVQ 1047
>gi|326433216|gb|EGD78786.1| hypothetical protein PTSG_01762 [Salpingoeca sp. ATCC 50818]
Length = 462
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 130 DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAH 189
+ ++ LFV+ +P+ + + ++F+ F G+KEVR V + FV++ +P
Sbjct: 385 EPNAILFVQNIPAGTTAERITNLFKQFAGFKEVRTVPSRPD--------IAFVEYDNPMQ 436
Query: 190 AATAMDALQGQSNIICLSNLVVFY 213
+ A L Q I S + V +
Sbjct: 437 SGYAKVQLH-QHEIAPGSKITVAF 459
>gi|401416828|ref|XP_003872908.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489134|emb|CBZ24386.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 819
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 103 GGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEV 162
GG+ P + A+ S+VP P L V+ LP + + ++V +F F + V
Sbjct: 705 GGVSPD-NGGSGAISNSASVSKVP-PGSDPQKLIVKNLPFEATEKDVRELFSAFSEIRTV 762
Query: 163 RLVSKE---SRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
R+ K S H + FV+F+S A AA A++ L+
Sbjct: 763 RVPRKSHAFSSHRENNHRGFAFVEFLSEAEAARALETLKA 802
>gi|195396823|ref|XP_002057028.1| GJ16573 [Drosophila virilis]
gi|194146795|gb|EDW62514.1| GJ16573 [Drosophila virilis]
Length = 792
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 34/220 (15%)
Query: 8 YSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDD-RGALRGMRDTDSLGASY-- 64
Y+ R+ + L +S T P H ++ Y R++ G + + D + +Y
Sbjct: 472 YNSGRKMTTVLRQALSALSMT----PDVHVIAELYRRNERCFGTYQTIADCQAYCEAYMQ 527
Query: 65 --DRYLRSAQISSYSGGQSARHMSGGM-----PSRPVDDPRIVGIGG-MDPGPSAKDRAL 116
+ Q SS GQ R G PS P+ ++ M PGP +K+
Sbjct: 528 VHSKVETYRQPSSTWRGQGDRKQMGNQKPVKRPSAPLPRKQVPAAKKIMPPGPPSKEPK- 586
Query: 117 GLGGGRSEVPLPPDAS-STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE--SRHPG 173
S P+ + +F++ L C++ +++ F+ F K+VRLV K R G
Sbjct: 587 -----ESNFKYSPNLEVNKIFIKNLYPRCTKEDLSDAFKCFGNIKDVRLVYKHGNQRFKG 641
Query: 174 GDPLILCFVDFVSPAHAATAMD-----ALQGQSNIICLSN 208
+ +++F P A A+ L GQ+ + +SN
Sbjct: 642 -----IAYIEFEKPEEAQNAVICGDGLCLGGQNIEVAISN 676
>gi|154283345|ref|XP_001542468.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410648|gb|EDN06036.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 245
Score = 37.0 bits (84), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 103 GGMDPGPSAKDRALGLG-GGRSEVPLPPDA----SSTLFVEGLPSDCSRREVAHIFRPFV 157
GG + PS R GL + P+ PD + LF+ +P + + +F F
Sbjct: 135 GGAETRPSKVTRGTGLKPSNAAAAPVIPDEYLPPNKILFLREIPDSLDQEGLTAVFGRFE 194
Query: 158 GYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
G+KEVR+V PG + FV++ + A +A +A G
Sbjct: 195 GFKEVRMV------PGRKG--IAFVEYEAETGAISAKEATSG 228
>gi|449303128|gb|EMC99136.1| hypothetical protein BAUCODRAFT_120428 [Baudoinia compniacensis
UAMH 10762]
Length = 822
Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+ + ++ LP + ++++V +F F + VR+ K R G F DF +P A +
Sbjct: 701 TKIIIKNLPFEATKKDVRALFGAFGQLRSVRVPKKMDRAARG----FAFADFTTPKEAES 756
Query: 193 AMDALQ 198
AM+AL+
Sbjct: 757 AMEALR 762
>gi|281202145|gb|EFA76350.1| U2 small nuclear ribonucleoprotein B [Polysphondylium pallidum
PN500]
Length = 246
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP+ LFVE LP C + +F F G++ + + + + + FV+F
Sbjct: 169 PPN--KILFVENLPEQCEEMMLNMLFSQFPGFQGISMTTAKKG--------VAFVEFDDD 218
Query: 188 AHAATAMDALQG 199
+ +A AM LQG
Sbjct: 219 SKSAVAMTHLQG 230
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
TL+V L + + +F K +++++ H G DP CFV+FV +HAA A
Sbjct: 15 TLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAE---HGGNDPY--CFVEFVEHSHAAAA 69
Query: 194 MDALQG 199
+ + G
Sbjct: 70 LQTMNG 75
>gi|395546429|ref|XP_003775090.1| PREDICTED: uncharacterized protein LOC100934042 [Sarcophilus
harrisii]
Length = 819
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 129 PDASS----TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDF 184
P++SS L++ GLP + +++E+ H+F P+ R+++ ++ G + F+ F
Sbjct: 581 PNSSSIRDANLYINGLPKNMTQKELEHLFSPYGHIITSRILTDKA---SGTSRGVGFIRF 637
Query: 185 VSPAHAATAMDALQGQSNIICLSNLVVFY 213
+ A A+ AL GQ L LVV +
Sbjct: 638 NMKSEAEEAIKALNGQKPCGILEPLVVRF 666
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 97 PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
PR G P + DR G + P P S+TLFV + D ++ V +F+ +
Sbjct: 331 PRAQRNDGQTPQQRSNDRQKQYG----DTPSQP--SATLFVGNISFDATQDMVTEVFQEY 384
Query: 157 VGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
VRL +E+ P G +V+F S A +AM+ L G
Sbjct: 385 GSINAVRLPTDRETGAPKG----FGYVEFSSIEEAKSAMENLTG 424
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 36.6 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 122 RSEVPLPPDASS-----TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
RS+ L P + T+FV+ L C+ ++V +F + KEVR+V+ + P G
Sbjct: 767 RSKTALRPKHQTGFDPRTVFVKRLDHSCTEQDVRTLFEQYGAVKEVRMVTTLAGKPRG-- 824
Query: 177 LILCFVDFVSPAHAATAMDAL-----QGQSNIICLSN 208
+V+F + AATA+ L +G+ + LSN
Sbjct: 825 --FAYVEFEASRDAATAIMNLDKAEFKGRQLQVALSN 859
>gi|62089134|dbj|BAD93011.1| bruno-like 4, RNA binding protein variant [Homo sapiens]
Length = 510
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG S + PP LFV L S +V +F F +E ++ R P G+
Sbjct: 164 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTIL----RGPDGNSKGC 219
Query: 180 CFVDFVSPAHAATAMDALQG-QSNIICLSNLVVFY 213
FV + S A A A++AL G Q+ S+LVV +
Sbjct: 220 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 254
>gi|451850380|gb|EMD63682.1| hypothetical protein COCSADRAFT_27011 [Cochliobolus sativus ND90Pr]
Length = 936
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
+TL+V LP D S E+ +F GYK + +K++ +CFV+F + A
Sbjct: 752 NTLYVGNLPMDTSEDELKAVFSKQRGYKRLCFRTKQNG-------PMCFVEFEDTSFATK 804
Query: 193 AMDALQG 199
A++ L G
Sbjct: 805 ALNELYG 811
>gi|303272661|ref|XP_003055692.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463666|gb|EEH60944.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 438
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
PP A +++FV LP+D S++ + + F + R+V ++ G FVDFV
Sbjct: 164 PPPAGASVFVRDLPTDASKQSLFERMQKFGKVRSCRVVLDKT---TGRSKGTAFVDFVDA 220
Query: 188 AHAATAMDA 196
A A+ A++A
Sbjct: 221 ASASRAIEA 229
>gi|145345423|ref|XP_001417211.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577438|gb|ABO95504.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 874
Score = 36.6 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGDPLILCFVDFVSPAH 189
+++ + V + + ++R++ +F PF K+VRL K + H G FV+F +
Sbjct: 767 SATKIVVRNVAFEATKRDIQKLFNPFGQLKQVRLPKKFDGAHRG-----FAFVEFNTRRE 821
Query: 190 AATAMDALQG 199
AMDAL+G
Sbjct: 822 TQAAMDALRG 831
>gi|328767502|gb|EGF77551.1| hypothetical protein BATDEDRAFT_13807 [Batrachochytrium
dendrobatidis JAM81]
gi|328767632|gb|EGF77681.1| hypothetical protein BATDEDRAFT_91336 [Batrachochytrium
dendrobatidis JAM81]
gi|328771962|gb|EGF82001.1| hypothetical protein BATDEDRAFT_9954 [Batrachochytrium
dendrobatidis JAM81]
Length = 235
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
++ LFV LPS + ++ +F G+KEVR+V G P I FV++ S A A
Sbjct: 160 NAILFVSQLPSSVTEESLSTLFAQNEGFKEVRIVP-------GRPDI-AFVEYASSAQAD 211
Query: 192 TAMDALQG 199
A L G
Sbjct: 212 QARMVLNG 219
>gi|148664595|gb|EDK97011.1| bruno-like 4, RNA binding protein (Drosophila), isoform CRA_b [Mus
musculus]
Length = 463
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG S + PP LFV L S +V +F F +E ++ R P G+
Sbjct: 145 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTIL----RGPDGNSKGC 200
Query: 180 CFVDFVSPAHAATAMDALQG-QSNIICLSNLVVFY 213
FV + S A A A++AL G Q+ S+LVV +
Sbjct: 201 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 235
>gi|356551226|ref|XP_003543978.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Glycine max]
Length = 847
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 121 GRSEVPLPPDASST-LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
G+ + L D SST L ++ + + + +++ +F PF K +RL K H G
Sbjct: 708 GQKQKTLEKDRSSTKLLIKNVAFEATEKDLRRLFSPFGQIKSLRLPMKFGNHRG-----F 762
Query: 180 CFVDFVSPAHAATAMDAL 197
FV++V+ A A+ AL
Sbjct: 763 AFVEYVTQQEAQNALKAL 780
>gi|150865889|ref|XP_001385283.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
gi|149387145|gb|ABN67254.2| Protein involved in regulation of cell size putative RNA binding
protein [Scheffersomyces stipitis CBS 6054]
Length = 732
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 14/80 (17%)
Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE-----------SRHPGGDPLILCF 181
+TL+V LP D + E+ +F P G++ + +K S H G +CF
Sbjct: 587 NTLYVGNLPPDATEAELRALFSPQKGFRRLSFRTKNQSSGTSGSSGTSGHNHGP---MCF 643
Query: 182 VDFVSPAHAATAMDALQGQS 201
V+F AHA A+ L G++
Sbjct: 644 VEFEDVAHATRALAELYGRA 663
>gi|291327533|ref|NP_001167545.1| CUGBP Elav-like family member 4 isoform F [Mus musculus]
gi|26341974|dbj|BAC34649.1| unnamed protein product [Mus musculus]
Length = 456
Score = 36.6 bits (83), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
GG S + PP LFV L S +V +F F +E ++ R P G+
Sbjct: 139 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTIL----RGPDGNSKGC 194
Query: 180 CFVDFVSPAHAATAMDALQG-QSNIICLSNLVVFY 213
FV + S A A A++AL G Q+ S+LVV +
Sbjct: 195 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229
>gi|398394993|ref|XP_003850955.1| hypothetical protein MYCGRDRAFT_94842 [Zymoseptoria tritici IPO323]
gi|339470834|gb|EGP85931.1| hypothetical protein MYCGRDRAFT_94842 [Zymoseptoria tritici IPO323]
Length = 1640
Score = 36.6 bits (83), Expect = 9.8, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 26/168 (15%)
Query: 6 WRYSDARQ-PQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSLGASY 64
+ Y D ++ PQ+ P V+ RP S +S ++ D GA +GM S
Sbjct: 373 FSYPDPQEDPQNTSPYNVAPRPN------SALNYTSAFSPDPRHGA-QGMPGFGEF-PSG 424
Query: 65 DRYLRSAQISSYSGGQSARHMSGGMPSRPVD-DPRIVGIGGMDPGPSAKDRALGLGGGRS 123
+ S I SG A + G ++P + DP+++G+GG +PGPSA
Sbjct: 425 ESGPPSGPIFPQSGFDFAAPLPGRESAQPSNIDPQLLGLGGANPGPSA-----------P 473
Query: 124 EVPLPP--DASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKES 169
V L P D SST +P R++ RP G + + ES
Sbjct: 474 AVSLTPVMDHSSTAGTRRVP---ERKKSGDTVRPRAGRRNADRIRAES 518
>gi|225684437|gb|EEH22721.1| U2 small nuclear ribonucleoprotein B [Paracoccidioides brasiliensis
Pb03]
Length = 1484
Score = 36.6 bits (83), Expect = 9.8, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 99 IVGIGGMDPGPSAKDRALGLG-GGRSEVPLPPD----ASSTLFVEGLPSDCSRREVAHIF 153
+V GG + PS + GL + P+ PD + LF+ +P + + +F
Sbjct: 1370 VVAPGGAEARPSKAVKGAGLKPSNAAAAPVIPDEYLPPNKILFLREIPDSLDQDGLTAVF 1429
Query: 154 RPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
F G+KEVR+V PG + FV++ + A +A +A G
Sbjct: 1430 GRFEGFKEVRMV------PGRKG--IAFVEYEAETGAISAKEATSG 1467
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,121,152,745
Number of Sequences: 23463169
Number of extensions: 186215824
Number of successful extensions: 404807
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 858
Number of HSP's that attempted gapping in prelim test: 403867
Number of HSP's gapped (non-prelim): 1298
length of query: 235
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 97
effective length of database: 9,121,278,045
effective search space: 884763970365
effective search space used: 884763970365
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 74 (33.1 bits)