BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 026658
         (235 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9W6I1|RBPMS_CHICK RNA-binding protein with multiple splicing OS=Gallus gallus
           GN=RBPMS PE=2 SV=1
          Length = 200

 Score = 50.8 bits (120), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/88 (42%), Positives = 43/88 (48%), Gaps = 12/88 (13%)

Query: 112 KDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
           KD     GGG  E     +   TLFV GLP D   RE+  +FRPF GY E  L+   S+ 
Sbjct: 6   KDTEHTNGGGNVE-----EEVRTLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 59

Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
           P G      FV F S A A  A +AL G
Sbjct: 60  PVG------FVTFDSRAGAEAAKNALNG 81


>sp|Q9WVB0|RBPMS_MOUSE RNA-binding protein with multiple splicing OS=Mus musculus GN=Rbpms
           PE=2 SV=2
          Length = 197

 Score = 50.1 bits (118), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 45/88 (51%), Gaps = 14/88 (15%)

Query: 119 GGGRSEVPLPPDASS-------TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRH 171
           GGG++E    P  ++       TLFV GLP D   RE+  +FRPF GY E  L+   S+ 
Sbjct: 3   GGGKAEKENTPSEANLQEEEVRTLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQ 61

Query: 172 PGGDPLILCFVDFVSPAHAATAMDALQG 199
           P G      FV F S + A  A +AL G
Sbjct: 62  PVG------FVSFDSRSEAEAAKNALNG 83


>sp|Q8VC52|RBPS2_MOUSE RNA-binding protein with multiple splicing 2 OS=Mus musculus
           GN=Rbpms2 PE=1 SV=1
          Length = 206

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 36/66 (54%), Gaps = 7/66 (10%)

Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
           TLFV GLP D   RE+  +FRPF GY E  L+   SR P G      FV F S A A  A
Sbjct: 26  TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTSRQPVG------FVIFDSRAGAEAA 78

Query: 194 MDALQG 199
            +AL G
Sbjct: 79  KNALNG 84


>sp|Q93062|RBPMS_HUMAN RNA-binding protein with multiple splicing OS=Homo sapiens GN=RBPMS
           PE=1 SV=1
          Length = 196

 Score = 48.5 bits (114), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)

Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
           TLFV GLP D   RE+  +FRPF GY E  L+   S+ P G      FV F S + A  A
Sbjct: 25  TLFVSGLPLDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVSFDSRSEAEAA 77

Query: 194 MDALQG 199
            +AL G
Sbjct: 78  KNALNG 83


>sp|B8AM21|RU2B_ORYSI U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp.
           indica GN=OsI_11177 PE=3 SV=1
          Length = 232

 Score = 48.1 bits (113), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 17/99 (17%)

Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
           GP+A  ++ G       LG    E P PP+  + LF++ LP++ +   +  +F+ + G++
Sbjct: 128 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 185

Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
           EVR++  +   PG     + FV++   + +  AM ALQG
Sbjct: 186 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQG 216


>sp|Q10MR0|RU2B_ORYSJ U2 small nuclear ribonucleoprotein B'' OS=Oryza sativa subsp.
           japonica GN=Os03g0298800 PE=2 SV=1
          Length = 232

 Score = 48.1 bits (113), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 17/99 (17%)

Query: 108 GPSAKDRALG-------LGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYK 160
           GP+A  ++ G       LG    E P PP+  + LF++ LP++ +   +  +F+ + G++
Sbjct: 128 GPNAAAQSNGTGYQASRLGKTSQEPPAPPN--NILFIQNLPAETTSMMLQILFQQYPGFR 185

Query: 161 EVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQG 199
           EVR++  +   PG     + FV++   + +  AM ALQG
Sbjct: 186 EVRMIEAK---PG-----IAFVEYEDDSQSMVAMQALQG 216


>sp|Q6ZRY4|RBPS2_HUMAN RNA-binding protein with multiple splicing 2 OS=Homo sapiens
           GN=RBPMS2 PE=2 SV=1
          Length = 209

 Score = 47.8 bits (112), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 36/66 (54%), Gaps = 7/66 (10%)

Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
           TLFV GLP D   RE+  +FRPF GY E  L+   +R P G      FV F S A A  A
Sbjct: 32  TLFVSGLPVDIKPRELYLLFRPFKGY-EGSLIKLTARQPVG------FVIFDSRAGAEAA 84

Query: 194 MDALQG 199
            +AL G
Sbjct: 85  KNALNG 90


>sp|Q9YGP5|RBPMS_XENLA RNA-binding protein with multiple splicing OS=Xenopus laevis
           GN=rbpms PE=2 SV=1
          Length = 196

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/66 (45%), Positives = 36/66 (54%), Gaps = 7/66 (10%)

Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
           TLFV GLP D   RE+  +FRPF GY E  L+   S+ P G      FV F + A A  A
Sbjct: 21  TLFVSGLPIDIKPRELYLLFRPFKGY-EGSLIKLTSKQPVG------FVTFDNRAGAEAA 73

Query: 194 MDALQG 199
            +AL G
Sbjct: 74  KNALNG 79


>sp|Q39244|RU1A_ARATH U1 small nuclear ribonucleoprotein A OS=Arabidopsis thaliana GN=U1A
           PE=1 SV=1
          Length = 250

 Score = 47.0 bits (110), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 13/94 (13%)

Query: 117 GLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDP 176
           G+     E P PP+  + LFV+ LP + +   +  +F  + G+KEVR++  +   PG   
Sbjct: 163 GMKPNMPEAPAPPN--NILFVQNLPHETTPMVLQMLFCQYQGFKEVRMIEAK---PG--- 214

Query: 177 LILCFVDFVSPAHAATAMDALQG---QSNIICLS 207
             + FV+F     +  AM  LQG   Q N + ++
Sbjct: 215 --IAFVEFADEMQSTVAMQGLQGFKIQQNQMLIT 246


>sp|Q9CQI7|RU2B_MOUSE U2 small nuclear ribonucleoprotein B'' OS=Mus musculus GN=Snrpb2
           PE=2 SV=1
          Length = 225

 Score = 45.8 bits (107), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 11/84 (13%)

Query: 117 GLGGGRSEVP-LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGD 175
           G      +VP  PP+    LF+  LP + +   ++ +F  F G+KEVRLV    RH    
Sbjct: 136 GTAAPNPQVPDYPPN--YILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD--- 188

Query: 176 PLILCFVDFVSPAHAATAMDALQG 199
              + FV+F +   A  A DALQG
Sbjct: 189 ---IAFVEFENDGQAGAARDALQG 209


>sp|P08579|RU2B_HUMAN U2 small nuclear ribonucleoprotein B'' OS=Homo sapiens GN=SNRPB2
           PE=1 SV=1
          Length = 225

 Score = 45.4 bits (106), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 10/82 (12%)

Query: 120 GGRSEVPLPPD--ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPL 177
           G  +  P  PD   +  LF+  LP + +   ++ +F  F G+KEVRLV    RH      
Sbjct: 136 GNSTPNPQVPDYPPNYILFLNNLPEETNEMMLSMLFNQFPGFKEVRLVP--GRHD----- 188

Query: 178 ILCFVDFVSPAHAATAMDALQG 199
            + FV+F +   A  A DALQG
Sbjct: 189 -IAFVEFENDGQAGAARDALQG 209


>sp|P43332|SNRPA_DROME U1 small nuclear ribonucleoprotein A OS=Drosophila melanogaster
           GN=snf PE=1 SV=1
          Length = 216

 Score = 45.4 bits (106), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 10/72 (13%)

Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
           PP+    LF+  LP + +   ++ +F  F G+KEVRLV   +RH       + FV+F + 
Sbjct: 139 PPN--QILFLTNLPEETNEMMLSMLFNQFPGFKEVRLVP--NRHD------IAFVEFTTE 188

Query: 188 AHAATAMDALQG 199
             +  A +ALQG
Sbjct: 189 LQSNAAKEALQG 200


>sp|Q06AA4|SNRPA_PIG U1 small nuclear ribonucleoprotein A OS=Sus scrofa GN=SNRPA PE=2
           SV=1
          Length = 282

 Score = 44.7 bits (104), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)

Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
           PP+    LF+  LP + +   ++ +F  F G+KEVRLV    RH       + FV+F + 
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254

Query: 188 AHAATAMDALQG----QSNIICLS 207
             A  A DALQG    Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278


>sp|P09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A OS=Homo sapiens GN=SNRPA PE=1
           SV=3
          Length = 282

 Score = 44.7 bits (104), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)

Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
           PP+    LF+  LP + +   ++ +F  F G+KEVRLV    RH       + FV+F + 
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254

Query: 188 AHAATAMDALQG----QSNIICLS 207
             A  A DALQG    Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278


>sp|Q2KIR1|SNRPA_BOVIN U1 small nuclear ribonucleoprotein A OS=Bos taurus GN=SNRPA PE=2
           SV=1
          Length = 282

 Score = 44.7 bits (104), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)

Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
           PP+    LF+  LP + +   ++ +F  F G+KEVRLV    RH       + FV+F + 
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254

Query: 188 AHAATAMDALQG----QSNIICLS 207
             A  A DALQG    Q+N + +S
Sbjct: 255 VQAGAARDALQGFKITQNNAMKIS 278


>sp|Q62189|SNRPA_MOUSE U1 small nuclear ribonucleoprotein A OS=Mus musculus GN=Snrpa PE=2
           SV=3
          Length = 287

 Score = 44.7 bits (104), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 14/84 (16%)

Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
           PP+    LF+  LP + +   ++ +F  F G+KEVRLV    RH       + FV+F + 
Sbjct: 210 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 259

Query: 188 AHAATAMDALQG----QSNIICLS 207
             A  A DALQG    Q+N + +S
Sbjct: 260 VQAGAARDALQGFKITQNNAMKIS 283


>sp|Q6FXP4|MRD1_CANGA Multiple RNA-binding domain-containing protein 1 OS=Candida
           glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
           0622 / NRRL Y-65) GN=MRD1 PE=3 SV=1
          Length = 861

 Score = 43.9 bits (102), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
           + V+ LP + +R++V  +F  F   K VR+  K  +   G      FV+FV P  A  AM
Sbjct: 740 IIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFVLPKEAENAM 795

Query: 195 DALQG 199
           D LQG
Sbjct: 796 DQLQG 800


>sp|P45429|SNRPA_XENLA U1 small nuclear ribonucleoprotein A OS=Xenopus laevis GN=snrpa
           PE=2 SV=1
          Length = 282

 Score = 43.1 bits (100), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 14/84 (16%)

Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
           PP+    LF+  LP + +   ++ +F  F G+KEVRLV    RH       + FV+F + 
Sbjct: 205 PPN--HILFLTNLPEETNELMLSMLFNQFPGFKEVRLVP--GRHD------IAFVEFDNE 254

Query: 188 AHAATAMDALQG----QSNIICLS 207
             A  A ++LQG    QSN + +S
Sbjct: 255 VQAGAARESLQGFKITQSNSMKIS 278


>sp|Q54J05|RU2B_DICDI U2 small nuclear ribonucleoprotein B'' OS=Dictyostelium discoideum
           GN=snrpb2 PE=3 SV=1
          Length = 241

 Score = 42.4 bits (98), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 10/71 (14%)

Query: 128 PPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSP 187
           PP+   TLFVE LP  C    ++ +F  F G+KEV +V  ES+        + F++F   
Sbjct: 164 PPN--KTLFVENLPDKCDSMMLSMLFSQFQGFKEVHMV--ESKKG------IAFIEFEDE 213

Query: 188 AHAATAMDALQ 198
             +  AM  LQ
Sbjct: 214 IKSGFAMTNLQ 224


>sp|Q6CQR6|MRD1_KLULA Multiple RNA-binding domain-containing protein 1 OS=Kluyveromyces
           lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
           1267 / NRRL Y-1140 / WM37) GN=MRD1 PE=3 SV=1
          Length = 878

 Score = 42.4 bits (98), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
           + V+ LP + +R++V  +F  F   K VR+  K  +   G      FV+F+ P  A  AM
Sbjct: 754 IIVKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAENAM 809

Query: 195 DALQG 199
           D LQG
Sbjct: 810 DQLQG 814


>sp|Q06106|MRD1_YEAST Multiple RNA-binding domain-containing protein 1 OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=MRD1 PE=1
           SV=1
          Length = 887

 Score = 42.0 bits (97), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)

Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
           S  + V+ LP + +R++V  +F  F   K VR+  K  +   G      FV+F+ P  A 
Sbjct: 762 SGKIIVKNLPFEATRKDVFELFNSFGQLKSVRVPKKFDKSARG----FAFVEFLLPKEAE 817

Query: 192 TAMDALQG 199
            AMD L G
Sbjct: 818 NAMDQLHG 825


>sp|Q75A83|MRD1_ASHGO Multiple RNA-binding domain-containing protein 1 OS=Ashbya gossypii
           (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
           Y-1056) GN=MRD1 PE=3 SV=2
          Length = 838

 Score = 42.0 bits (97), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)

Query: 137 VEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDA 196
           V+ LP + +R++V  +F  F   K VR+  K  +   G      FV+F+ P+ A  AMD 
Sbjct: 716 VKNLPFEATRKDVFELFSSFGQLKSVRVPKKFDKSARG----FAFVEFLLPSEAENAMDQ 771

Query: 197 LQG 199
           LQG
Sbjct: 772 LQG 774


>sp|O74452|SCW1_SCHPO Cell wall integrity protein scw1 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=scw1 PE=1 SV=1
          Length = 561

 Score = 41.6 bits (96), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 11/78 (14%)

Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
           +T++V  LP   S  E+  +F   VGYK +   +K     G  P  +CFV+F +  +A  
Sbjct: 426 NTIYVGNLPPSTSEEELKVLFSTQVGYKRLCFRTK-----GNGP--MCFVEFENIPYAME 478

Query: 193 AMDALQGQSNIICLSNLV 210
           A+  LQG    +CLS+ +
Sbjct: 479 ALKNLQG----VCLSSSI 492


>sp|O22922|RU2B1_ARATH U2 small nuclear ribonucleoprotein B'' OS=Arabidopsis thaliana
           GN=U2B'' PE=1 SV=1
          Length = 232

 Score = 40.8 bits (94), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)

Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
           +PP+  + LF++ LP + +   +  +F  + G+KE+R++  +   PG     + FV++  
Sbjct: 154 MPPN--NILFIQNLPHETTSMMLQLLFEQYPGFKEIRMIDAK---PG-----IAFVEYED 203

Query: 187 PAHAATAMDALQG 199
              A+ AM  LQG
Sbjct: 204 DVQASIAMQPLQG 216


>sp|Q15020|SART3_HUMAN Squamous cell carcinoma antigen recognized by T-cells 3 OS=Homo
           sapiens GN=SART3 PE=1 SV=1
          Length = 963

 Score = 40.8 bits (94), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
           LF+ GLP  C++ E+  I +     K++RLV+  +  P G    L +V++ + + A+ A 
Sbjct: 803 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858

Query: 194 --MDALQGQSNII 204
             MD +  + NII
Sbjct: 859 MKMDGMTIKENII 871


>sp|Q8H1S6|RU2B2_ARATH U2 small nuclear ribonucleoprotein B'' 2 OS=Arabidopsis thaliana
           GN=At1g06960 PE=1 SV=1
          Length = 229

 Score = 40.4 bits (93), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 10/73 (13%)

Query: 127 LPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVS 186
           +PP+  + LF+  LP + +   +  +F  + G+KE+R++  +   PG     + FV++  
Sbjct: 151 MPPN--NILFIHNLPIETNSMMLQLLFEQYPGFKEIRMIEAK---PG-----IAFVEYED 200

Query: 187 PAHAATAMDALQG 199
              ++ AM ALQG
Sbjct: 201 DVQSSMAMQALQG 213


>sp|Q5REG1|SART3_PONAB Squamous cell carcinoma antigen recognized by T-cells 3 OS=Pongo
           abelii GN=SART3 PE=2 SV=1
          Length = 981

 Score = 40.0 bits (92), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
           LF+ GLP  C++ E+  I +     K++RLV+  +  P G    L +V++ + + A+ A 
Sbjct: 821 LFISGLPFSCTKEELEEICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 876

Query: 194 --MDALQGQSNII 204
             MD +  + N+I
Sbjct: 877 MKMDGMTIKENVI 889


>sp|Q0DKM4|RU1A_ORYSJ U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp.
           japonica GN=Os05g0154800 PE=3 SV=1
          Length = 253

 Score = 39.7 bits (91), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)

Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
           ++ LFV+ LP + +   +  +F  + G+KEVR+V  +   PG     + FV++     A 
Sbjct: 178 NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVEYGDEGQAT 229

Query: 192 TAMDALQG 199
            AM+ LQG
Sbjct: 230 AAMNHLQG 237


>sp|A2Y0J7|RU1A_ORYSI U1 small nuclear ribonucleoprotein A OS=Oryza sativa subsp. indica
           GN=OsI_18512 PE=3 SV=1
          Length = 253

 Score = 39.7 bits (91), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)

Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
           ++ LFV+ LP + +   +  +F  + G+KEVR+V  +   PG     + FV++     A 
Sbjct: 178 NNILFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAK---PG-----IAFVEYGDEGQAT 229

Query: 192 TAMDALQG 199
            AM+ LQG
Sbjct: 230 AAMNHLQG 237


>sp|Q9SEU4|SR33_ARATH Serine/arginine-rich splicing factor 33 OS=Arabidopsis thaliana
           GN=SR33 PE=1 SV=1
          Length = 287

 Score = 39.7 bits (91), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 16/117 (13%)

Query: 97  PRIVGIGGMDPGPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPF 156
           PR  G  G  P P       G  GGRS      D  ++L V  L  DC + ++   F  F
Sbjct: 11  PRGYGRRGRSPSPR------GRYGGRSR-----DLPTSLLVRNLRHDCRQEDLRKSFEQF 59

Query: 157 VGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
              K++ L      +  GDP    FV F+ PA AA A   + G   ++    L V +
Sbjct: 60  GPVKDIYLPRD---YYTGDPRGFGFVQFMDPADAADAKHHMDGY--LLLGRELTVVF 111


>sp|Q9JLI8|SART3_MOUSE Squamous cell carcinoma antigen recognized by T-cells 3 OS=Mus
           musculus GN=Sart3 PE=2 SV=1
          Length = 962

 Score = 39.3 bits (90), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA- 193
           LF+ GLP  C++ E+  I +     K++RLV+  +  P G    L +V++ + + A+ A 
Sbjct: 803 LFISGLPFSCTKEELEDICKAHGTVKDLRLVTNRAGKPKG----LAYVEYENESQASQAV 858

Query: 194 --MDALQGQSNII 204
             MD +  + N+I
Sbjct: 859 MKMDGMTIRENVI 871


>sp|P34761|WHI3_YEAST Protein WHI3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
           S288c) GN=WHI3 PE=1 SV=1
          Length = 661

 Score = 39.3 bits (90), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
           +TL+V  LPSD + +E+  +F    G++ +   +K +   G     +CFV+F   + A  
Sbjct: 538 NTLYVGNLPSDATEQELRQLFSGQEGFRRLSFRNKNTTSNGHSHGPMCFVEFDDVSFATR 597

Query: 193 AMDALQGQ 200
           A+  L G+
Sbjct: 598 ALAELYGR 605


>sp|Q9W4D2|RNP4F_DROME RNA-binding protein 4F OS=Drosophila melanogaster GN=Rnp4F PE=1
           SV=1
          Length = 941

 Score = 39.3 bits (90), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 4/65 (6%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
           +FV  L   CS+ E+  +F PF   K+VRLV K ++   G    + +V+F  P  A  A+
Sbjct: 726 IFVRNLHPACSKEELHELFSPFGTIKDVRLVHKLNKQFKG----IAYVEFEKPGEAQRAV 781

Query: 195 DALQG 199
               G
Sbjct: 782 AGRDG 786


>sp|Q01560|NOP3_YEAST Nucleolar protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508
           / S288c) GN=NPL3 PE=1 SV=1
          Length = 414

 Score = 38.1 bits (87), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 11/71 (15%)

Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHA 190
           +++ LFV   P D    E+  IF PF   KEV++++              FV+F     A
Sbjct: 123 SNTRLFVRPFPLDVQESELNEIFGPFGPMKEVKILNG-----------FAFVEFEEAESA 171

Query: 191 ATAMDALQGQS 201
           A A++ + G+S
Sbjct: 172 AKAIEEVHGKS 182


>sp|Q6CEW9|MRD1_YARLI Multiple RNA-binding domain-containing protein 1 OS=Yarrowia
           lipolytica (strain CLIB 122 / E 150) GN=MRD1 PE=3 SV=1
          Length = 828

 Score = 37.4 bits (85), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
           S + ++ LP + ++++V  +F  F   K VR+  K +    G      F ++VS   A  
Sbjct: 703 SKILIKNLPFEATKKDVQKLFGAFGSLKTVRVPKKFNSESRG----FAFAEYVSAKEAEH 758

Query: 193 AMDALQG 199
           AM ALQG
Sbjct: 759 AMSALQG 765


>sp|Q5F3T7|CELF1_CHICK CUGBP Elav-like family member 1 OS=Gallus gallus GN=CELF1 PE=1 SV=2
          Length = 489

 Score = 37.4 bits (85), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATAM 194
           LF+  +   C+  ++  +F PF   +E R++    R P G      FV F + A A TA+
Sbjct: 110 LFIGMISKKCNENDIRVMFSPFGQIEECRIL----RGPDGLSRGCAFVTFTTRAMAQTAI 165

Query: 195 DAL-QGQSNIICLSNLVVFY 213
            A+ Q Q+   C S +VV +
Sbjct: 166 KAMHQAQTMEGCSSPIVVKF 185


>sp|Q9UT83|MUG28_SCHPO Meiotically up-regulated gene 28 protein OS=Schizosaccharomyces
           pombe (strain 972 / ATCC 24843) GN=mug28 PE=1 SV=1
          Length = 609

 Score = 37.0 bits (84), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHP--GGDPLILCFVDFVSPAHAA 191
           +++V  LPS C   ++  +F PF  + +  ++S++         P +  F+ F +   A 
Sbjct: 21  SIYVGNLPSTCQSSDLHELFEPFGNFSKFHMLSRKKNKSTDSKSPTLFAFITFENKCSAD 80

Query: 192 TAMDALQGQS 201
            A+ +L G S
Sbjct: 81  NAIASLNGSS 90


>sp|Q5NVC8|CELF4_PONAB CUGBP Elav-like family member 4 OS=Pongo abelii GN=CELF4 PE=2 SV=2
          Length = 486

 Score = 36.2 bits (82), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
           GG S +  PP     LFV  L    S  +V  +F  F   +E  ++    R P G+    
Sbjct: 139 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTIL----RGPDGNSKGC 194

Query: 180 CFVDFVSPAHAATAMDALQG-QSNIICLSNLVVFY 213
            FV + S A A  A++AL G Q+     S+LVV +
Sbjct: 195 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229


>sp|Q9BZC1|CELF4_HUMAN CUGBP Elav-like family member 4 OS=Homo sapiens GN=CELF4 PE=1 SV=1
          Length = 486

 Score = 36.2 bits (82), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
           GG S +  PP     LFV  L    S  +V  +F  F   +E  ++    R P G+    
Sbjct: 139 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTIL----RGPDGNSKGC 194

Query: 180 CFVDFVSPAHAATAMDALQG-QSNIICLSNLVVFY 213
            FV + S A A  A++AL G Q+     S+LVV +
Sbjct: 195 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229


>sp|Q9VRV7|PM14_DROME Pre-mRNA branch site p14-like protein OS=Drosophila melanogaster
           GN=CG13298 PE=2 SV=1
          Length = 121

 Score = 36.2 bits (82), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI- 178
             R+ + LPP+ +  L+V  LP   +  E+  IF  F   +++R+        G  P   
Sbjct: 2   NKRNHIRLPPEVNRLLYVRNLPYKITSDEMYDIFGKFGAIRQIRV--------GNTPETR 53

Query: 179 -LCFVDFVSPAHAATAMDALQGQSNIICLSNLVVFY 213
              FV +     A  A D L G +  +C   LVV Y
Sbjct: 54  GTAFVVYEDIFDAKNACDHLSGFN--VCNRYLVVLY 87


>sp|Q7TSY6|CELF4_MOUSE CUGBP Elav-like family member 4 OS=Mus musculus GN=Celf4 PE=1 SV=2
          Length = 486

 Score = 36.2 bits (82), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 120 GGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLIL 179
           GG S +  PP     LFV  L    S  +V  +F  F   +E  ++    R P G+    
Sbjct: 139 GGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTIL----RGPDGNSKGC 194

Query: 180 CFVDFVSPAHAATAMDALQG-QSNIICLSNLVVFY 213
            FV + S A A  A++AL G Q+     S+LVV +
Sbjct: 195 AFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKF 229


>sp|P42731|PABP2_ARATH Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2
           PE=1 SV=1
          Length = 629

 Score = 36.2 bits (82), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAA 191
           SS L+V+ L    S  ++  IF PF         SK  R P G      FV F +P  A 
Sbjct: 317 SSNLYVKNLDPSISDEKLKEIFSPFGTVTS----SKVMRDPNGTSKGSGFVAFATPEEAT 372

Query: 192 TAMDALQGQ 200
            AM  L G+
Sbjct: 373 EAMSQLSGK 381


>sp|Q01617|CPO_DROME Protein couch potato OS=Drosophila melanogaster GN=cpo PE=2 SV=3
          Length = 738

 Score = 36.2 bits (82), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 134 TLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAATA 193
           TLFV GLP D   RE+  +FR + GY+   L           P  + FV F + A A  A
Sbjct: 452 TLFVSGLPMDAKPRELYLLFRAYEGYEGSLLKVTSKNGKTASP--VGFVTFHTRAGAEAA 509

Query: 194 MDALQG 199
              LQG
Sbjct: 510 KQDLQG 515


>sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium
           discoideum GN=mrd1 PE=3 SV=1
          Length = 895

 Score = 35.8 bits (81), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 9/89 (10%)

Query: 109 PSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKE 168
           P    +++   GG+   P     SS + ++ LP + + +E+  +F  +   + VR+  K 
Sbjct: 776 PENSKQSIKSNGGQPNKP-----SSKIIIKNLPFESTIKEIRKLFTAYGEIQSVRIPKK- 829

Query: 169 SRHPGGDPLILCFVDFVSPAHAATAMDAL 197
              P G      FV+F++   A  AM+AL
Sbjct: 830 ---PNGGHRGFGFVEFLTEEEAKNAMEAL 855


>sp|Q4PC17|MRD1_USTMA Multiple RNA-binding domain-containing protein 1 OS=Ustilago maydis
           (strain 521 / FGSC 9021) GN=MRD1 PE=3 SV=1
          Length = 858

 Score = 35.4 bits (80), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)

Query: 132 SSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRL-VSKESRHPGGDPLILCFVDFVSPAHA 190
           S  LF+  LP   S  E+   F  F   K+V + + K+++   G    L FV F  PAHA
Sbjct: 313 SGRLFIRNLPFAASGDEILAFFESFGTVKQVHIPLDKQTKASKG----LAFVSFSDPAHA 368

Query: 191 ATAMDALQGQS 201
             A  A  G +
Sbjct: 369 LAAYRAKDGST 379


>sp|Q5BGA9|MRD1_EMENI Multiple RNA-binding domain-containing protein 1 OS=Emericella
           nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
           NRRL 194 / M139) GN=mrd1 PE=3 SV=1
          Length = 819

 Score = 35.0 bits (79), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 131 ASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDFVSPA 188
           A++TLF++ L    + + +   FRP  G+   R+ +K + ++PG    +   F DF + A
Sbjct: 590 ATATLFIKNLNFSTTNQSLIEAFRPLDGFVSARIKTKPDPKNPGQTLSMGFGFADFKTKA 649

Query: 189 HAATAMDALQG 199
            A  A+  + G
Sbjct: 650 QAQAALAVMNG 660



 Score = 34.7 bits (78), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
           + + ++ LP   ++++V  +F  +   + VR+  K  R   G      F DFVS   A  
Sbjct: 697 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARG----FGFADFVSAREAEN 752

Query: 193 AMDALQ 198
           AMDAL+
Sbjct: 753 AMDALK 758


>sp|P19339|SXL_DROME Protein sex-lethal OS=Drosophila melanogaster GN=Sxl PE=1 SV=1
          Length = 354

 Score = 35.0 bits (79), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 115 ALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGG 174
           +LG GG    +  P  +++ L V  LP D + RE+  +FR        R++     +  G
Sbjct: 107 SLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRD---YKTG 163

Query: 175 DPLILCFVDFVSPAHAATAMDALQG 199
                 FVDF S   +  A+  L G
Sbjct: 164 YSFGYAFVDFTSEMDSQRAIKVLNG 188


>sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1
          Length = 157

 Score = 35.0 bits (79), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 135 LFVEGLPSDCSRREVAHIFRPFVGYKEVRLVS-KESRHPGGDPLILCFVDFVSPAHAATA 193
           LFV GL  +   + +   F  F    EV +V  +E++   G      F+ F +P HA+ A
Sbjct: 8   LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRG----FGFITFTNPEHASVA 63

Query: 194 MDALQGQS 201
           M A+ G+S
Sbjct: 64  MRAMNGES 71


>sp|Q9FMP4|PM14_ARATH Pre-mRNA branch site p14-like protein OS=Arabidopsis thaliana
           GN=At5g12190 PE=2 SV=1
          Length = 124

 Score = 35.0 bits (79), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)

Query: 122 RSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLI--L 179
           +S   LPP+ +  L+V  LP + +  E+  IF  +   +++R+        G D      
Sbjct: 8   KSNTRLPPEVNRVLYVRNLPFNITSEEMYDIFGKYGAIRQIRI--------GCDKATKGT 59

Query: 180 CFVDFVSPAHAATAMDALQGQSNIICLSNLVVFYQIA 216
            FV +     A  A+D L G  N+     +V++YQ A
Sbjct: 60  AFVVYEDIYDAKNAVDHLSG-FNVANRYLIVLYYQHA 95


>sp|Q4WJT7|MRD1_ASPFU Multiple RNA-binding domain-containing protein 1 OS=Neosartorya
           fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
           FGSC A1100) GN=mrd1 PE=3 SV=1
          Length = 825

 Score = 35.0 bits (79), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 133 STLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSKESRHPGGDPLILCFVDFVSPAHAAT 192
           + + ++ LP   ++++V  +F  +   + VR+  K  R   G      F DFVS   A  
Sbjct: 702 TKIIIKNLPFQATKKDVRSLFGAYGQLRSVRVPKKFDRSARG----FGFADFVSAREAEN 757

Query: 193 AMDALQ 198
           AMDAL+
Sbjct: 758 AMDALK 763



 Score = 31.2 bits (69), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 129 PDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLVSK-ESRHPGGD-PLILCFVDF 184
           P  +STLFV+ L    +      +F+P  G+   R+ +K + + PG    +   FVDF
Sbjct: 593 PVVTSTLFVKNLNFSTTNERFTEVFKPLDGFVSARIKTKPDPKRPGKTLSMGFGFVDF 650


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.137    0.421 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,749,873
Number of Sequences: 539616
Number of extensions: 4350797
Number of successful extensions: 9295
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 9225
Number of HSP's gapped (non-prelim): 131
length of query: 235
length of database: 191,569,459
effective HSP length: 114
effective length of query: 121
effective length of database: 130,053,235
effective search space: 15736441435
effective search space used: 15736441435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)