BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026660
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 67 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 119
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 67 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 119
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 75 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 127
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 128 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 75 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 127
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 128 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 246
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 247 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 278 bits (710), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 69 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 121
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 122 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 278 bits (710), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 278 bits (710), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 67 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 119
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 277 bits (709), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 72 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 124
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 125 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 277 bits (709), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 131/233 (56%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++D DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 71 LDVIHTENK-----LYLVFEHVDQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 123
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 276 bits (707), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 175/233 (75%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G++FCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLSFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 276 bits (707), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 69 LDVIHTENK-----LYLVFEFLSMDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 121
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 122 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 276 bits (707), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 71 LDVIHTENK-----LYLVFEFLSMDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 123
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 124 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 276 bits (705), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 69 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 121
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 122 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 67 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 119
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 71 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 123
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 70 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 122
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 123 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 69 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 121
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 122 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 69 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 121
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 122 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 240
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 241 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 72 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 124
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 125 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 243
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 244 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 70 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 122
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 123 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 67 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 119
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 70 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 122
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 123 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 71 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 123
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 275 bits (702), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 173/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 70 LDVIHTENK-----LYLVFEFLSMDLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 122
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 123 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 241
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 242 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 294
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 274 bits (701), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 174/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 67 LDVIHTENK-----LYLVFEHVHQDLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 119
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG
Sbjct: 120 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 238
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 274 bits (701), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/230 (56%), Positives = 172/230 (74%), Gaps = 9/230 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLKK++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 274 bits (701), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 173/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 71 LDVIHTENK-----LYLVFEFLSMDLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 123
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 273 bits (699), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 173/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 68 LDVIHTENK-----LYLVFEFLHQDLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 120
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 121 SHRVLHRDLKPENLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 273 bits (698), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 173/233 (74%), Gaps = 9/233 (3%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
+DV +NK LYLVFE++ DLK ++ + TG IP+ +KS ++QL +G+AFCH
Sbjct: 71 LDVIHTENK-----LYLVFEFLHQDLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 123
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H +LHRDLKP NLL++ + +K+AD GLARAF +P++ Y HE++TLWYRAPE+LLG
Sbjct: 124 SHRVLHRDLKPQNLLINTEG-AIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH- 179
+YSTAVD+WS+ CIFAE+VT+ ALFPGDSE+ QL IFR LGTP+E VWPGV+S+ ++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
+P+W Q + VP LD+DG LL QML YDP+KRISAK A+ HP+F D+ K
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 295
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 238 bits (606), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 115/216 (53%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFE++D DLKK + E++ T KS + QL G+A+CH +LHRDLKP NL
Sbjct: 75 LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL 131
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++R+ LKIAD GLARAF +P++KYTHEI+TLWYRAP+VL+GS YST +D+WSV CI
Sbjct: 132 LINREG-ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH-EYPQWNPQSLATAV 193
FAE+V T LFPG SE QL+ IFR+LGTPN K WP V+ L + + + P + +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 194 PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
LD+ G+DLL +ML+ DP++RI+AK+A+EH YF +
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 237 bits (604), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 114/216 (52%), Positives = 154/216 (71%), Gaps = 5/216 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFE++D DLKK + E++ T KS + QL G+A+CH +LHRDLKP NL
Sbjct: 75 LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL 131
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++R+ LKIAD GLARAF +P++KYTHE++TLWYRAP+VL+GS YST +D+WSV CI
Sbjct: 132 LINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH-EYPQWNPQSLATAV 193
FAE+V T LFPG SE QL+ IFR+LGTPN K WP V+ L + + + P + +
Sbjct: 191 FAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 194 PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
LD+ G+DLL +ML+ DP++RI+AK+A+EH YF +
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 235 bits (600), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 153/216 (70%), Gaps = 5/216 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFE++D DLKK + E++ T KS + QL G+A+CH +LHRDLKP NL
Sbjct: 75 LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNL 131
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++R+ LKIAD GLARAF +P++KYTHE++TLWYRAP+VL+GS YST +D+WSV CI
Sbjct: 132 LINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH-EYPQWNPQSLATAV 193
FAE+V LFPG SE QL+ IFR+LGTPN K WP V+ L + + + P + +
Sbjct: 191 FAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFL 250
Query: 194 PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
LD+ G+DLL +ML+ DP++RI+AK+A+EH YF +
Sbjct: 251 KGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 231 bits (589), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/223 (53%), Positives = 159/223 (71%), Gaps = 10/223 (4%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L+L+FEY + DLKKY+ ++ + +KS +YQL GV FCH LHRDLKP NL
Sbjct: 108 LHLIFEYAENDLKKYM----DKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163
Query: 75 LMD----RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
L+ +T LKI D GLARAF +PI+++THEI+TLWYR PE+LLGS HYST+VD+WS
Sbjct: 164 LLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWS 223
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE-YPQWNPQSL 189
+ACI+AE++ KT LFPGDSE+ QL IF +LG P++ WPGV++L +W + +P++ ++L
Sbjct: 224 IACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTL 283
Query: 190 ATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
+ LD +GLDLL ML+ DP KRISAK A+EHPYF D
Sbjct: 284 KRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND 326
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 231 bits (589), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 154/219 (70%), Gaps = 6/219 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFE+M+ DLKK + +TG + + +K +YQL +GVA CH H ILHRDLKP NL
Sbjct: 94 LTLVFEFMEKDLKKVLDE-NKTG--LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL 150
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++ LK+AD GLARAF +P++ YTHE++TLWYRAP+VL+GS YST+VD+WS+ CI
Sbjct: 151 LINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCI 209
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE--YPQWNPQSLATA 192
FAE++T LFPG ++ QL IF +LGTPN + WP V L W + + + + ++
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSI 269
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
+P ++G+DLL ML +DP+KRISA+ AM HPYF DLD
Sbjct: 270 IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 231 bits (589), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 154/219 (70%), Gaps = 6/219 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFE+M+ DLKK + +TG + + +K +YQL +GVA CH H ILHRDLKP NL
Sbjct: 94 LTLVFEFMEKDLKKVLDE-NKTG--LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNL 150
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++ LK+AD GLARAF +P++ YTHE++TLWYRAP+VL+GS YST+VD+WS+ CI
Sbjct: 151 LINSDG-ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCI 209
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE--YPQWNPQSLATA 192
FAE++T LFPG ++ QL IF +LGTPN + WP V L W + + + + ++
Sbjct: 210 FAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSI 269
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
+P ++G+DLL ML +DP+KRISA+ AM HPYF DLD
Sbjct: 270 IPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 226 bits (575), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 150/215 (69%), Gaps = 6/215 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFEY+D DLK+Y+ G I ++ VK ++QL +G+A+CH +LHRDLKP NL
Sbjct: 75 LTLVFEYLDKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNL 131
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++ + LK+AD GLARA ++P K Y +E++TLWYR P++LLGST YST +DMW V CI
Sbjct: 132 LINERG-ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCI 190
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW--HEYPQWNPQSLATA 192
F E+ T LFPG + +QL IFR+LGTP E+ WPG+ S + + YP++ ++L +
Sbjct: 191 FYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSH 250
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P LD DG DLL ++LQ++ RISA+ AM+HP+F
Sbjct: 251 APRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 223 bits (567), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 146/218 (66%), Gaps = 6/218 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFE+ D DLKKY F ++ VKS ++QL KG+ FCH +LHRDLKP NL
Sbjct: 76 LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++R LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+ YST++DMWS CI
Sbjct: 133 LINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191
Query: 135 FAELVTKT-ALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQW-NPQSLATA 192
FAEL LFPG+ QL IFRLLGTP E+ WP ++ L ++ YP + SL
Sbjct: 192 FAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
VP L+ G DLL+ +L+ +P +RISA++A++HPYF D
Sbjct: 252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 220 bits (561), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 146/218 (66%), Gaps = 6/218 (2%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L LVFE+ D DLKKY F ++ VKS ++QL KG+ FCH +LHRDLKP NL
Sbjct: 76 LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNL 132
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L++R LK+A+ GLARAF +P++ Y+ E++TLWYR P+VL G+ YST++DMWS CI
Sbjct: 133 LINRNG-ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191
Query: 135 FAELVTK-TALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQW-NPQSLATA 192
FAEL LFPG+ QL IFRLLGTP E+ WP ++ L ++ YP + SL
Sbjct: 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
VP L+ G DLL+ +L+ +P +RISA++A++HPYF D
Sbjct: 252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 210 bits (535), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 110/237 (46%), Positives = 156/237 (65%), Gaps = 16/237 (6%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYI--RSFRQTGENIPVNTVKSLMYQLCKGVAFC 59
DV +NK L LVFE+MD DLKKY+ R+ T + +N VK +QL +G+AFC
Sbjct: 70 DVIHTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS 119
H + ILHRDLKP NLL++++ LK+ D GLARAF +P+ ++ E++TLWYRAP+VL+GS
Sbjct: 125 HENKILHRDLKPQNLLINKRGQ-LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 120 THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH 179
YST++D+WS CI AE++T LFPG ++ +QL IF ++GTPNE +WP V+ L ++
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN 243
Query: 180 EYPQWNP-----QSLA--TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
Q P Q L T P LD + +D L +LQ +P R+SAK+A+ HP+F +
Sbjct: 244 PNIQQRPPRDLRQVLQPHTKEP-LDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 6/234 (2%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
DV + T L LVFE++D DL Y+ + G +P T+K +M+QL +G+ F H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLDFLH 137
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H ++HRDLKP N+L+ + +K+AD GLAR ++ + T ++TLWYRAPEVLL S+
Sbjct: 138 SHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEVLLQSS 195
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 180
Y+T VD+WSV CIFAE+ + LF G S++ QL I ++G P E+ WP +L
Sbjct: 196 -YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR-QA 253
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 234
+ + Q + V ++D+ G DLL + L ++P+KRISA A+ HPYF DL++ +
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK 307
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 182 bits (463), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 145/234 (61%), Gaps = 6/234 (2%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
DV + T L LVFE++D DL Y+ + G +P T+K +M+QL +G+ F H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLDFLH 137
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H ++HRDLKP N+L+ + +K+AD GLAR ++ + T ++TLWYRAPEVLL S+
Sbjct: 138 SHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEVLLQSS 195
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 180
Y+T VD+WSV CIFAE+ + LF G S++ QL I ++G P E+ WP +L
Sbjct: 196 -YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR-QA 253
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 234
+ + Q + V ++D+ G DLL + L ++P+KRISA A+ HPYF DL++ +
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK 307
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 139/227 (61%), Gaps = 6/227 (2%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
MDV + + LVFE++D DL+ Y+ G +P T+K LM Q +G+ F H
Sbjct: 80 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLH 137
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
+ I+HRDLKP N+L+ T+K+AD GLAR ++ + T ++TLWYRAPEVLL ST
Sbjct: 138 ANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMA-LTPVVVTLWYRAPEVLLQST 195
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 180
Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E WP SL
Sbjct: 196 -YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-A 253
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 254 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 180 bits (457), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 139/227 (61%), Gaps = 6/227 (2%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
MDV + + LVFE++D DL+ Y+ G +P T+K LM Q +G+ F H
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLH 129
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
+ I+HRDLKP N+L+ T+K+AD GLAR ++ + + ++TLWYRAPEVLL ST
Sbjct: 130 ANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMALFP-VVVTLWYRAPEVLLQST 187
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 180
Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E WP SL
Sbjct: 188 -YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-A 245
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 179 bits (455), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 138/227 (60%), Gaps = 6/227 (2%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
MDV + + LVFE++D DL+ Y+ G +P T+K LM Q +G+ F H
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLH 129
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
+ I+HRDLKP N+L+ T+K+AD GLAR ++ + ++TLWYRAPEVLL ST
Sbjct: 130 ANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMA-LAPVVVTLWYRAPEVLLQST 187
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 180
Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E WP SL
Sbjct: 188 -YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-A 245
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 138/227 (60%), Gaps = 6/227 (2%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
MDV + + LVFE++D DL+ Y+ G +P T+K LM Q +G+ F H
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG--LPAETIKDLMRQFLRGLDFLH 129
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
+ I+HRDLKP N+L+ T+K+AD GLAR ++ + ++TLWYRAPEVLL ST
Sbjct: 130 ANCIVHRDLKPENILVTSGG-TVKLADFGLARIYSYQMA-LDPVVVTLWYRAPEVLLQST 187
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 180
Y+T VDMWSV CIFAE+ + LF G+SE QL IF L+G P E WP SL
Sbjct: 188 -YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG-A 245
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+P P+ + + VP +++ G LL +ML ++P KRISA +A++H Y
Sbjct: 246 FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 177 bits (448), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 95/227 (41%), Positives = 140/227 (61%), Gaps = 6/227 (2%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
DV + T L LVFE++D DL Y+ + G +P T+K +M+QL +G+ F H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--VPTETIKDMMFQLLRGLDFLH 137
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGST 120
H ++HRDLKP N+L+ + +K+AD GLAR ++ + T ++TLWYRAPEVLL S+
Sbjct: 138 SHRVVHRDLKPQNILVT-SSGQIKLADFGLARIYSFQMA-LTSVVVTLWYRAPEVLLQSS 195
Query: 121 HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHE 180
Y+T VD+WSV CIFAE+ + LF G S++ QL I ++G P E+ WP +L
Sbjct: 196 -YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPR-QA 253
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + Q + V ++D+ G DLL + L ++P+KRISA A+ HPYF
Sbjct: 254 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 173 bits (438), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 135/221 (61%), Gaps = 10/221 (4%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT---VKSLMYQLCKGVAFCHGHGILHRD 68
++ + LVF++M+TDL+ I+ +N V T +K+ M +G+ + H H ILHRD
Sbjct: 84 KSNISLVFDFMETDLEVIIK------DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 137
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LKP+NLL+D + LK+AD GLA++F P + Y H+++T WYRAPE+L G+ Y VDM
Sbjct: 138 LKPNNLLLDENGV-LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDM 196
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
W+V CI AEL+ + PGDS+L QL IF LGTP E+ WP + SL ++ + +
Sbjct: 197 WAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIP 256
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
L D LDL++ + ++P RI+A +A++ YF +
Sbjct: 257 LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 169 bits (427), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 139/235 (59%), Gaps = 12/235 (5%)
Query: 3 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH 62
V QNK L ++ EY+ L K ++SF ++G +IP+N + +YQL + V F H
Sbjct: 105 VNPSQNK----YLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL 160
Query: 63 GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
GI HRD+KP NLL++ K TLK+ D G A+ +P + I + +YRAPE++LG+T Y
Sbjct: 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL-IPSEPSVAXICSRFYRAPELMLGATEY 219
Query: 123 STAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
+ ++D+WS+ C+F EL+ LF G++ + QL+ I +++GTP ++ ++ +P
Sbjct: 220 TPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFP 279
Query: 183 QWNPQS----LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 233
+ L P+L +DLLEQ+L+Y+P RI+ +AM HP+FD L +
Sbjct: 280 TLKAKDWRKILPEGTPSL---AIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNS 331
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 135/224 (60%), Gaps = 2/224 (0%)
Query: 8 NKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHR 67
+K+ L LV EY+ + + R + + + +P+ +K MYQL + +A+ H GI HR
Sbjct: 106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHR 165
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVD 127
D+KP NLL+D + LK+ D G A+ + + I + +YRAPE++ G+T+Y+T +D
Sbjct: 166 DIKPQNLLLDPPSGVLKLIDFGSAKIL-IAGEPNVSXICSRYYRAPELIFGATNYTTNID 224
Query: 128 MWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQ 187
+WS C+ AEL+ LFPG+S + QL+ I ++LGTP+ + ++ H++PQ P
Sbjct: 225 IWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPH 284
Query: 188 SLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
+ P D +DL+ ++L+Y PS R++A +A+ HP+FD+L
Sbjct: 285 PFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 135/235 (57%), Gaps = 16/235 (6%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K ++S + + ++I +YQ+ +G+ + H
Sbjct: 108 DILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHS 162
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 163 ANVLHRDLKPSNLLIN-TTCDLKICDFGLAR-IADPEHDHTGFLTEXVATRWYRAPEIML 220
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + + M
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN-MK 279
Query: 178 WHEYPQWNPQSLATA----VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
Y Q P A P D LDLL++ML ++P+KRI+ ++A+ HPY +
Sbjct: 280 ARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLE 334
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 12/220 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V + M++DL + I S + + + V+ +YQL +G+ + H ++HRDLKP NL
Sbjct: 134 VYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 189
Query: 75 LMDRKTMTLKIADLGLARAF-TLPIKK---YTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + LKI D G+AR T P + T + T WYRAPE++L Y+ A+D+WS
Sbjct: 190 LVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---LMNWHEYPQWNPQ 187
V CIF E++ + LFPG + + QL I +LGTP+ V V + P P
Sbjct: 249 VGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPV 308
Query: 188 SLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
T P D+ L LL +ML+++PS RISA A+ HP+
Sbjct: 309 PWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 348
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 20/241 (8%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
++++ + E +Y++ E M TDL + I + + ++I + +YQ + V H
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QYFIYQTLRAVKVLH 129
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----------TLPIKKYTHEILTLWY 110
G ++HRDLKP NLL++ LK+ D GLAR T T + T WY
Sbjct: 130 GSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 170
RAPEV+L S YS A+D+WS CI AEL + +FPG QLL IF ++GTP+
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 171 GVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
EY P + L P ++ G+DLL++ML +DP+KRI+AK+A+EHPY
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 227 F 227
Sbjct: 309 L 309
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 142/255 (55%), Gaps = 52/255 (20%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENI--PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
+YLVF+YM+TDL IR+ NI PV+ + ++YQL K + + H G+LHRD+KP
Sbjct: 86 VYLVFDYMETDLHAVIRA------NILEPVHK-QYVVYQLIKVIKYLHSGGLLHRDMKPS 138
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI----------------------LTLWY 110
N+L++ + +K+AD GL+R+F + I++ T+ I T WY
Sbjct: 139 NILLNAECH-VKVADFGLSRSF-VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWY 196
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP-NEKVW 169
RAPE+LLGST Y+ +DMWS+ CI E++ +FPG S + QL I ++ P NE V
Sbjct: 197 RAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVE 256
Query: 170 P--------GVSSLMNWHEYPQWNPQSLATAVPNL----------DKDGLDLLEQMLQYD 211
+ SL E Q N + + T NL +++ LDLL+++LQ++
Sbjct: 257 SIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316
Query: 212 PSKRISAKKAMEHPY 226
P+KRISA A++HP+
Sbjct: 317 PNKRISANDALKHPF 331
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 150 bits (379), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/220 (36%), Positives = 123/220 (55%), Gaps = 12/220 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V + M++DL + I S + + + V+ +YQL +G+ + H ++HRDLKP NL
Sbjct: 135 VYVVLDLMESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL 190
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKY----THEILTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + LKI D G+AR ++ T + T WYRAPE++L Y+ A+D+WS
Sbjct: 191 LVN-ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 249
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---LMNWHEYPQWNPQ 187
V CIF E++ + LFPG + + QL I +LGTP+ V V + P P
Sbjct: 250 VGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPV 309
Query: 188 SLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
T P D+ L LL +ML+++PS RISA A+ HP+
Sbjct: 310 PWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFL 349
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 150 bits (379), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 146
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 147 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLXEXVATRWYRAPEIML 204
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 150 bits (379), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 147
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 148 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLXEXVATRWYRAPEIML 205
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 266 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 150 bits (378), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 20/241 (8%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
++++ + E +Y++ E M TDL + I + + ++I + +YQ + V H
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QYFIYQTLRAVKVLH 129
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF----------TLPIKKYTHEILTLWY 110
G ++HRDLKP NLL++ LK+ D GLAR T T + T WY
Sbjct: 130 GSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 170
RAPEV+L S YS A+D+WS CI AEL + +FPG QLL IF ++GTP+
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 171 GVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
EY P + L P ++ G+DLL++ML +DP+KRI+AK+A+EHPY
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 227 F 227
Sbjct: 309 L 309
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 206
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 150
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 151 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 208
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 268
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 269 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 322
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 142
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 143 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 200
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 146
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 147 ANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 204
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 142
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 143 ANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 200
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 142
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 143 ANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 200
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 181
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 240
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 241 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 300
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 301 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 150 bits (378), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 146
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 147 ANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 204
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 93 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 152
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 153 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 211
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 212 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 271
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 272 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 314
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 150 bits (378), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 206
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 101 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 160
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 161 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 219
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 220 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 279
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 280 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 322
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 142
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 143 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 200
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 147
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 148 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 205
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 266 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 319
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 148
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 149 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 206
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 266
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 267 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 320
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 139
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 140 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 197
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 257
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 258 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 311
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 146
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 147 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 204
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 149 bits (377), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 146
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 147 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 204
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 116 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 175
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 176 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 234
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 235 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 294
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 295 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 337
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 144
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 145 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 202
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 316
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 124 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 183
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 184 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 242
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 243 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 302
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 303 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 345
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 167 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 226
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 227 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 285
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 286 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 345
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 346 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 388
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 142
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 143 ANVLHRDLKPSNLLLN-TTXDLKIXDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 200
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 314
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 162
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 163 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 220
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 281 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 125/223 (56%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 126 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 185
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 186 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 244
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 245 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 304
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 305 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 347
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 132/234 (56%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 140
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 141 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 198
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 258
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 259 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 107 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 166
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 167 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 225
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 226 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 285
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 286 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 328
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 159
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 218
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 219 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 278
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 279 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 206
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 96 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 155
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 156 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 214
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 215 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 274
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 275 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 317
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 159
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 160 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 218
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 219 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 278
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 279 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 88 KKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 206
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +PQ
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHP 266
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 89 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 148
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 149 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 207
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 208 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 267
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 268 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 310
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ ++ I + +YRAPE++ G+T Y++++D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSY-ICSRYYRAPELIFGATDYTSSIDV 206
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ +PQ
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHP 266
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 206
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 207 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 266
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 267 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 181
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 182 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 240
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 241 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 300
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 301 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 140
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 141 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 198
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P ++ + +L
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKA 258
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 259 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 312
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 131/233 (56%), Gaps = 14/233 (6%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 144
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 145 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 202
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ P N PN D LDLL++ML ++P KRI ++A+ HPY
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 131/234 (55%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K ++ + ++I +YQ+ +G+ + H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICY-----FLYQILRGLKYIHS 146
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 147 ANVLHRDLKPSNLLLN-TTCDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 204
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 128/219 (58%), Gaps = 7/219 (3%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L+LVFEY D + + +++ +P + VKS+ +Q + V FCH H +HRD+KP N+
Sbjct: 77 LHLVFEYCDHTVLHELDRYQR---GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENI 133
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ + ++ +K+ D G AR T P Y E+ T WYR+PE+L+G T Y VD+W++ C+
Sbjct: 134 LITKHSV-IKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCV 192
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQ-WNPQSLAT 191
FAEL++ L+PG S++ QL I + LG P + + + + P + + L
Sbjct: 193 FAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLEL 252
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
PN+ L LL+ L DP++R++ ++ + HPYF+++
Sbjct: 253 KFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 124/223 (55%), Gaps = 2/223 (0%)
Query: 9 KEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
K+ L LV +Y+ + + R + + + +PV VK MYQL + +A+ H GI HRD
Sbjct: 92 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 151
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D+
Sbjct: 152 IKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSIDV 210
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 211 WSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHP 270
Query: 189 LATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 271 WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 313
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 126/224 (56%), Gaps = 4/224 (1%)
Query: 10 EGRTVLYL--VFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHR 67
E + V+YL V +Y+ + + R + + + +PV VK MYQL + +A+ H GI HR
Sbjct: 87 EKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHR 146
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVD 127
D+KP NLL+D T LK+ D G A+ + I + +YRAPE++ G+T Y++++D
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-EPNVSXICSRYYRAPELIFGATDYTSSID 205
Query: 128 MWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQ 187
+WS C+ AEL+ +FPGDS + QL+ I ++LGTP + ++ ++PQ
Sbjct: 206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAH 265
Query: 188 SLATAV-PNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P + + L ++L+Y P+ R++ +A H +FD+L
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 148 bits (374), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 130/241 (53%), Gaps = 20/241 (8%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH 60
++++ + E +Y++ E M TDL + I + + ++I + +YQ + V H
Sbjct: 75 FNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHI-----QYFIYQTLRAVKVLH 129
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF-------TLPIKKYT---HEILTLWY 110
G ++HRDLKP NLL++ LK+ D GLAR + P + + + T WY
Sbjct: 130 GSNVIHRDLKPSNLLIN-SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 170
RAPEV+L S YS A+D+WS CI AEL + +FPG QLL IF ++GTP+
Sbjct: 189 RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDL 248
Query: 171 GVSSLMNWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
EY P + L P ++ G+DLL++ML +DP+KRI+AK+A+EHPY
Sbjct: 249 RCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
Query: 227 F 227
Sbjct: 309 L 309
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 129/234 (55%), Gaps = 14/234 (5%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +YLV M DL K +++ + ++I +YQ+ +G+ + H
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 162
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 163 ANVLHRDLKPSNLLLN-TTXDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 220
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+++ + +L
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 178 WH---EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ P N PN D LDLL++ML ++P KRI ++A+ HPY +
Sbjct: 281 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 334
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 132/235 (56%), Gaps = 18/235 (7%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
D+ + E +Y+V + M+TDL K +++ + ++I +YQ+ +G+ + H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-----FLYQILRGLKYIHS 144
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLL 117
+LHRDLKP NLL++ T LKI D GLAR P +T + T WYRAPE++L
Sbjct: 145 ANVLHRDLKPSNLLLN-TTSDLKICDFGLARVAD-PDHDHTGFLTEYVATRWYRAPEIML 202
Query: 118 GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN-EKVWPGVSSLM 176
S Y+ ++D+WSV CI AE+++ +FPG L QL HI +LG+P+ E + G++ +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGIN--L 260
Query: 177 NWHEY----PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
Y P N PN D LDLL++ML ++P KRI ++A+ HPY
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 118/216 (54%), Gaps = 12/216 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 131 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 185
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 186 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNMTVDIWSVGCI 241
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV---WPGVSSLMNWHEYPQWNPQSLAT 191
AEL+T LFPG + QL I RL GTP V P + + PQ ++ A
Sbjct: 242 MAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFAD 301
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ +DLLE+ML D KRI+A +A+ HPYF
Sbjct: 302 VFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 126/224 (56%), Gaps = 12/224 (5%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T YLV +M TDL K ++ E + + ++ L+YQ+ KG+ + H GI+HRDLKP
Sbjct: 103 TDFYLVMPFMGTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPG 157
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NL ++ + LKI D GLAR + ++T WYRAPEV+L Y+ VD+WSV
Sbjct: 158 NLAVN-EDCELKILDFGLARQAD---SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVG 213
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS--LMNWHE-YPQWNPQSL 189
CI AE++T LF G L QL I ++ GTP + + S N+ + P+ +
Sbjct: 214 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF 273
Query: 190 ATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 233
A+ + N ++LLE+ML D +R++A +A+ HPYF+ L T
Sbjct: 274 ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDT 317
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 145 bits (366), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L + HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNAMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 133/243 (54%), Gaps = 30/243 (12%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGEN-----IPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
++L+F+Y + DL I+ R + N +P VKSL+YQ+ G+ + H + +LHRDL
Sbjct: 95 VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDL 154
Query: 70 KPHNLLM---DRKTMTLKIADLGLARAFTLPIKKYTH---EILTLWYRAPEVLLGSTHYS 123
KP N+L+ + +KIAD+G AR F P+K ++T WYRAPE+LLG+ HY+
Sbjct: 155 KPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYT 214
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSE---------LQQLLHIFRLLGTPNEKVW----- 169
A+D+W++ CIFAEL+T +F E QL IF ++G P +K W
Sbjct: 215 KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKK 274
Query: 170 -PGVSSLMNWHEYPQWNPQSLATAVP----NLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
P S+LM + SL + D LL+++L DP KRI++++AM+
Sbjct: 275 MPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334
Query: 225 PYF 227
PYF
Sbjct: 335 PYF 337
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++S + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKSQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GL R + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDS-ELKILDFGLCRHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 144 bits (362), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 159 AVNEDS-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 271
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 13/217 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
YLV +M TDL+K + G ++ L+YQ+ KG+ + H G++HRDLKP NL
Sbjct: 122 FYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL 175
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y ++T WYRAPEV+L HY+ VD+WSV CI
Sbjct: 176 AVNEDC-ELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCI 231
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV---SSLMNWHEYPQWNPQSLAT 191
AE++T LF G L QL I ++ G P + + ++ PQ +
Sbjct: 232 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ 291
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P DLLE+ML+ D KR++A +A+ HP+F+
Sbjct: 292 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 164 AVNEDC-ELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 276
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 144 bits (362), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 163 AVNEDS-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 275
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 143 bits (361), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 164 AVNEDC-ELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 276
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 164 AVNEDC-ELKILDFGLARHTADEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 276
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 116/217 (53%), Gaps = 13/217 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
YLV +M TDL+K + G ++ L+YQ+ KG+ + H G++HRDLKP NL
Sbjct: 104 FYLVMPFMQTDLQKIM------GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y ++T WYRAPEV+L HY+ VD+WSV CI
Sbjct: 158 AVNEDC-ELKILDFGLARHADAEMTGY---VVTRWYRAPEVILSWMHYNQTVDIWSVGCI 213
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV---SSLMNWHEYPQWNPQSLAT 191
AE++T LF G L QL I ++ G P + + ++ PQ +
Sbjct: 214 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ 273
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P DLLE+ML+ D KR++A +A+ HP+F+
Sbjct: 274 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 143 bits (360), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 98 VYLVTHLMGADLNNIVKCAKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 153 AVN-EDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 265
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 125 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 179
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 180 AVNEDC-ELKILDFGLARHTDDEMXGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 292
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 293 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKXQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVN-EDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 162 AVN-EDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 274
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 162 AVN-EDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 274
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 113 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 167
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 168 AVN-EDXELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 280
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 281 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 159 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 271
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 163 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 275
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVN-EDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 112 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 166
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 167 AVN-EDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 222
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 223 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 279
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 280 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 143 bits (360), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 125 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 179
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 180 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 235
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 236 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 292
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 293 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 113 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 167
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 168 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 223
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 224 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 280
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 281 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 109 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 164 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 219
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 220 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 276
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 277 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 162 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 274
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 101 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 155
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 156 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 211
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 212 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 268
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 269 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + T + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVN-EDCELKILDFGLARHTD---DEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 163 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 275
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 121 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 175
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 176 AVN-EDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 288
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 289 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 169 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 281
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 282 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 169 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 281
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 282 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 107 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 162 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 217
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 218 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 274
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 275 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 114 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 169 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 224
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 225 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 281
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 282 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKXQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 159 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 271
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVN-EDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 104 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 159 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 215 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 271
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 272 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 122 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 177 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 289
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 290 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 121 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 175
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 176 AVN-EDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 231
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 232 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 288
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 289 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 122 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 177 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 289
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 290 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 153 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 265
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 99 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 153
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 154 AVN-EDCELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 266
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 267 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 100 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 154
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 155 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 211 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 267
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 268 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 153 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 265
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 108 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 163 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 219 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 275
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 276 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 99 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 153
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 154 AVNEDC-ELKILDFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 209
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 210 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 266
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 267 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDAGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 142 bits (358), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDYGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 122/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVN-EDCELKILDRGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 123/217 (56%), Gaps = 14/217 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++S + E+ V+ L+YQL +G+ + H GI+HRDLKP N+
Sbjct: 108 VYLVTTLMGADLNNIVKSQALSDEH-----VQFLVYQLLRGLKYIHSAGIIHRDLKPSNV 162
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + L+I D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 163 AVNEDS-ELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP----QSLA 190
AEL+ ALFPG + QL I ++GTP+ +V +SS + Y Q P + L+
Sbjct: 219 MAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS-EHARTYIQSLPPMPQKDLS 277
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + +DLL +ML D +R+SA +A+ H YF
Sbjct: 278 SIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 137/275 (49%), Gaps = 60/275 (21%)
Query: 15 LYLVFEYMDTDLKKYIRS-FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V E D+DLKK ++ T E+I K+++Y L G F H GI+HRDLKP N
Sbjct: 105 LYIVLEIADSDLKKLFKTPIFLTEEHI-----KTILYNLLLGENFIHESGIIHRDLKPAN 159
Query: 74 LLMDRKTMTLKIADLGLARAFTLP----------------------IKKYTHEILTLWYR 111
L+++ ++K+ D GLAR K+ T ++T WYR
Sbjct: 160 CLLNQDC-SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYR 218
Query: 112 APEVLLGSTHYSTAVDMWSVACIFAELV-----------TKTALFPGD------------ 148
APE++L +Y+ ++D+WS CIFAEL+ + LFPG
Sbjct: 219 APELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSK 278
Query: 149 -----SELQQLLHIFRLLGTPNEKVWPGVSS---LMNWHEYPQWNPQSLATAVPNLDKDG 200
S QL IF ++GTP E ++ + +P P +L P++ DG
Sbjct: 279 KVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338
Query: 201 LDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 235
++LLE ML+++P+KRI+ +A++HPY D+ K +L
Sbjct: 339 INLLESMLKFNPNKRITIDQALDHPYLKDVRKKKL 373
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + + + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + + + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDGGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 141 bits (356), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 121/219 (55%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 98 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + + + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 153 AVNEDC-ELKILDFGLARHTDDEMAGF---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 208
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 209 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 265
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 266 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 7/215 (3%)
Query: 16 YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
YLVFE++D + + F + V+ ++Q+ G+ FCH H I+HRD+KP N+L
Sbjct: 100 YLVFEFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENIL 156
Query: 76 MDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIF 135
+ ++ +K+ D G AR P + Y E+ T WYRAPE+L+G Y AVD+W++ C+
Sbjct: 157 VS-QSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV 215
Query: 136 AELVTKTALFPGDSELQQLLHIFRLLGT--PNEKVWPGVSSLMNWHEYPQWNPQS-LATA 192
E+ LFPGDS++ QL HI LG P + + + P+ + L
Sbjct: 216 TEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERR 275
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P L + +DL ++ L DP KR + + H +F
Sbjct: 276 YPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 141 bits (355), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 120/219 (54%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 122 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D GLAR + + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 177 AVNEDC-ELKILDFGLARHTD---DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 232
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 233 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMN--- 289
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 290 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 140 bits (353), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 120/219 (54%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILGFGLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 140 bits (352), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 14/217 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + E+ V+ L+YQL +G+ + H GI+HRDLKP N+
Sbjct: 108 VYLVTTLMGADLNNIVKCQALSDEH-----VQFLVYQLLRGLKYIHSAGIIHRDLKPSNV 162
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + L+I D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 163 AVNEDS-ELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP----QSLA 190
AEL+ ALFPG + QL I ++GTP+ +V +SS + Y Q P + L+
Sbjct: 219 MAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS-EHARTYIQSLPPMPQKDLS 277
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + +DLL +ML D +R+SA +A+ H YF
Sbjct: 278 SIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 120/219 (54%), Gaps = 18/219 (8%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + T ++ V+ L+YQ+ +G+ + H I+HRDLKP NL
Sbjct: 102 VYLVTHLMGADLNNIVKCQKLTDDH-----VQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ LKI D LAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 157 AVNEDC-ELKILDFYLARHTDDEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS------LMNWHEYPQWNPQS 188
AEL+T LFPG + QL I RL+GTP ++ +SS + + + P+ N
Sbjct: 213 MAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN--- 269
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + +DLLE+ML D KRI+A +A+ H YF
Sbjct: 270 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH--GHG 63
G+ L +V EY+ L + R++ + P +K ++QL + + H
Sbjct: 92 GERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN 151
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYS 123
+ HRD+KPHN+L++ TLK+ D G A+ + P + I + +YRAPE++ G+ HY+
Sbjct: 152 VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLS-PSEPNVAYICSRYYRAPELIFGNQHYT 210
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS------SLMN 177
TAVD+WSV CIFAE++ +F GD+ QL I R+LG P+ +V ++ L N
Sbjct: 211 TAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYN 270
Query: 178 WHEYPQWN---PQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
P N SL A K+ DLL +LQY P +R+ +A+ HPYFD+L
Sbjct: 271 SKGIPWSNVFSDHSLKDA-----KEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 122/217 (56%), Gaps = 14/217 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV M DL ++ + E+ V+ L+YQL +G+ + H GI+HRDLKP N+
Sbjct: 100 VYLVTTLMGADLNNIVKCQALSDEH-----VQFLVYQLLRGLKYIHSAGIIHRDLKPSNV 154
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + L+I D GLAR + Y + T WYRAPE++L HY+ VD+WSV CI
Sbjct: 155 AVN-EDCELRILDFGLARQADEEMTGY---VATRWYRAPEIMLNWMHYNQTVDIWSVGCI 210
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP----QSLA 190
AEL+ ALFPG + QL I ++GTP+ +V +SS + Y Q P + L+
Sbjct: 211 MAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS-EHARTYIQSLPPMPQKDLS 269
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + +DLL +ML D +R+SA +A+ H YF
Sbjct: 270 SIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 124/224 (55%), Gaps = 22/224 (9%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V EYM+TDL + E+ + MYQL +G+ + H +LHRDLKP NL
Sbjct: 97 VYIVQEYMETDLANVLEQGPLLEEH-----ARLFMYQLLRGLKYIHSANVLHRDLKPANL 151
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHE------ILTLWYRAPEVLLGSTHYSTAVDM 128
++ + + LKI D GLAR Y+H+ ++T WYR+P +LL +Y+ A+DM
Sbjct: 152 FINTEDLVLKIGDFGLARIMD---PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDM 208
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLM-----NWHEYPQ 183
W+ CIFAE++T LF G EL+Q+ I + +E+ + S++ N P
Sbjct: 209 WAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPH 268
Query: 184 WNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ L +P + ++ +D LEQ+L + P R++A++A+ HPY
Sbjct: 269 ---KPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 133 bits (334), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 126/224 (56%), Gaps = 12/224 (5%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
+ +YLVF++ + DL + + ++ +K +M L G+ + H + ILHRD+K
Sbjct: 97 KASIYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKA 153
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLWYRAPEVLLGSTHYSTAVD 127
N+L+ R + LK+AD GLARAF+L +Y + ++TLWYR PE+LLG Y +D
Sbjct: 154 ANVLITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPID 212
Query: 128 MWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS--LMNWHEYPQWN 185
+W CI AE+ T++ + G++E QL I +L G+ +VWP V + L E +
Sbjct: 213 LWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ 272
Query: 186 PQSLATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + +D LDL++++L DP++RI + A+ H +F
Sbjct: 273 KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 133 bits (334), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 125/221 (56%), Gaps = 12/221 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLVF++ + DL + + ++ +K +M L G+ + H + ILHRD+K N+
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
L+ R + LK+AD GLARAF+L +Y + ++TLWYR PE+LLG Y +D+W
Sbjct: 157 LITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWG 215
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS--LMNWHEYPQWNPQS 188
CI AE+ T++ + G++E QL I +L G+ +VWP V + L E + +
Sbjct: 216 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 275
Query: 189 LATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + +D LDL++++L DP++RI + A+ H +F
Sbjct: 276 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 125/221 (56%), Gaps = 12/221 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLVF++ + DL + + ++ +K +M L G+ + H + ILHRD+K N+
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
L+ R + LK+AD GLARAF+L +Y + ++TLWYR PE+LLG Y +D+W
Sbjct: 157 LITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWG 215
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS--LMNWHEYPQWNPQS 188
CI AE+ T++ + G++E QL I +L G+ +VWP V + L E + +
Sbjct: 216 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 275
Query: 189 LATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + +D LDL++++L DP++RI + A+ H +F
Sbjct: 276 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 125/221 (56%), Gaps = 12/221 (5%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLVF++ + DL + + ++ +K +M L G+ + H + ILHRD+K N+
Sbjct: 99 IYLVFDFCEHDLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 155
Query: 75 LMDRKTMTLKIADLGLARAFTLPIK----KYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
L+ R + LK+AD GLARAF+L +Y + ++TLWYR PE+LLG Y +D+W
Sbjct: 156 LITRDGV-LKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWG 214
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS--LMNWHEYPQWNPQS 188
CI AE+ T++ + G++E QL I +L G+ +VWP V + L E + +
Sbjct: 215 AGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK 274
Query: 189 LATAVPNLDKD--GLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + +D LDL++++L DP++RI + A+ H +F
Sbjct: 275 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 132/277 (47%), Gaps = 61/277 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
LY+V E D+DLKK ++ E VK+++Y L G F H GI+HRDLKP N
Sbjct: 107 LYIVLEIADSDLKKLFKTPIFLTEQ----HVKTILYNLLLGEKFIHESGIIHRDLKPANC 162
Query: 75 LMDRKTMTLKIADLGLARAFTLP-------------------------IKKYTHEILTLW 109
L+++ ++KI D GLAR K+ T ++T W
Sbjct: 163 LLNQDC-SVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRW 221
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELV-----------TKTALFPGD---------- 148
YRAPE++L +Y+ ++D+WS CIFAEL+ + LFPG
Sbjct: 222 YRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHN 281
Query: 149 -------SELQQLLHIFRLLGTPNEKVWPGVSS---LMNWHEYPQWNPQSLATAVPNLDK 198
S QL IF ++GTP E+ ++ + +P + L+ ++ K
Sbjct: 282 SKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISK 341
Query: 199 DGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 235
+G+DLLE ML+++ KRI+ KA+ HPY D+ K L
Sbjct: 342 EGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENL 378
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 125/223 (56%), Gaps = 21/223 (9%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFEY++ F+Q + + ++ MY+L K + +CH GI+HRD+KPHN+++
Sbjct: 112 LVFEYINNT------DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 166 DHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 224
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW-----------PGVSSLMNWHEYPQW 184
++ + F G QL+ I ++LGT E+++ P + ++ H +W
Sbjct: 225 SMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHFNDILGQHSRKRW 282
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LDLL+++L+YD +R++AK+AMEHPYF
Sbjct: 283 ENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 125/223 (56%), Gaps = 21/223 (9%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFEY++ F+Q + + ++ MY+L K + +CH GI+HRD+KPHN+++
Sbjct: 117 LVFEYINNT------DFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 171 DHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 229
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW-----------PGVSSLMNWHEYPQW 184
++ + F G QL+ I ++LGT E+++ P + ++ H +W
Sbjct: 230 SMIFRREPFFHGQDNYDQLVRIAKVLGT--EELYGYLKKYHIDLDPHFNDILGQHSRKRW 287
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LDLL+++L+YD +R++AK+AMEHPYF
Sbjct: 288 ENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
LYLV E M TDL + I R I ++ MY + G+ H G++HRDL P N+
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIV---ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNI 165
Query: 75 LM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
L+ D +T I D LAR T K TH + WYRAPE+++ ++ VDMWS C
Sbjct: 166 LLADNNDIT--ICDFNLAREDTADANK-THYVTHRWYRAPELVMQFKGFTKLVDMWSAGC 222
Query: 134 IFAELVTKTALFPGDSELQQLLHIFRLLGTP--NEKVWPGVSSLMNWHEYPQWNPQSLA- 190
+ AE+ + ALF G + QL I ++GTP + V S ++ N + A
Sbjct: 223 VMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW 282
Query: 191 -TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
VP D LDL+ +ML+++P +RIS ++A+ HPYF+ L
Sbjct: 283 TAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 130 bits (326), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 117/221 (52%), Gaps = 11/221 (4%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
LYLV E M TDL + I R I ++ MY + G+ H G++HRDL P N+
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIV---ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNI 165
Query: 75 LM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
L+ D +T I D LAR T K TH + WYRAPE+++ ++ VDMWS C
Sbjct: 166 LLADNNDIT--ICDFNLAREDTADANK-THYVTHRWYRAPELVMQFKGFTKLVDMWSAGC 222
Query: 134 IFAELVTKTALFPGDSELQQLLHIFRLLGTP--NEKVWPGVSSLMNWHEYPQWNPQSLA- 190
+ AE+ + ALF G + QL I ++GTP + V S ++ N + A
Sbjct: 223 VMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAW 282
Query: 191 -TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
VP D LDL+ +ML+++P +RIS ++A+ HPYF+ L
Sbjct: 283 TAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 130 bits (326), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+L+
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 129 bits (325), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 110 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 164 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 223 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 282
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 283 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 139/295 (47%), Gaps = 74/295 (25%)
Query: 1 MDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT----VKSLMYQLCKGV 56
+D+ ++ E LY+V E D+D KK R+ PV +K+L+Y L GV
Sbjct: 118 LDIVIPKDVEKFDELYVVLEIADSDFKKLFRT--------PVYLTELHIKTLLYNLLVGV 169
Query: 57 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--------TLPI---------- 98
+ H GILHRDLKP N L++ + ++K+ D GLAR LPI
Sbjct: 170 KYVHSAGILHRDLKPANCLVN-QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLV 228
Query: 99 ---------KKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT--------- 140
++ T ++T WYRAPE++L +Y+ A+D+WS+ CIFAEL+
Sbjct: 229 TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYH 288
Query: 141 --KTALFPGDS--------------------ELQQLLHIFRLLGTPNEKVWPGVS---SL 175
+ LFPG S QL IF +LGTP+E+ + +
Sbjct: 289 ADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAK 348
Query: 176 MNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
+P+ LA P D + LL++ML ++P+KRI+ + + HP+F ++
Sbjct: 349 RYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 110 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 164 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 222
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 223 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 282
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 283 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNNT------DFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 109 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 163 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 221
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 222 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 281
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 282 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 116 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 170 DHEHRKLRLIDWGLA-EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 228
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 229 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 288
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 289 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 122/221 (55%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
LVFE+++ F+Q + + ++ MY++ K + +CH GI+HRD+KPHN+++
Sbjct: 111 LVFEHVNN------TDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P ++Y + + +++ PE+L+ Y ++DMWS+ C+ A
Sbjct: 165 DHEHRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLA 223
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTP---------NEKVWPGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT N ++ P + ++ H +W
Sbjct: 224 SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWER 283
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + + LD L+++L+YD R++A++AMEHPYF
Sbjct: 284 FVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 127 bits (318), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYLVMELMDANLXQVIQM------ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYLVMELMDANLXQVIQM------ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 97 VYLVMELMDANLXQVIQM------ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNI 150
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 151 VV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 207
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 126 bits (317), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYLVMELMDANLXQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDXTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 142 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 196 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 252
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 253 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 103 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 157 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 213
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 214 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 273
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 274 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 105 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 159 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 215
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 216 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 276 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 105 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 159 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 215
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 216 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 275
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 276 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 215 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 274
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 142 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 195
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 196 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 252
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 253 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 312
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 97 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 150
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 151 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 207
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 267
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 98 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 152 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 208
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 209 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 269 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 125 bits (313), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 118/228 (51%), Gaps = 23/228 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 98 VYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 152 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 208
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWH------EYPQW 184
E+V LFPG + Q + LGTP +K+ P V + + +P+
Sbjct: 209 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKL 268
Query: 185 NPQSLATAVPNLDK----DGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P SL A +K DLL +ML DP+KRIS A++HPY +
Sbjct: 269 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 105 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 159 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 217
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 218 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 277
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 278 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 105 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 159 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 217
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 218 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 277
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 278 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 106 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 160 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 218
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 219 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 278
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 279 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 106 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 160 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 218
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 219 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 278
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 279 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 105 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 159 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 217
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 218 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 277
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 278 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 105 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 159 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 217
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 218 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 277
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 278 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 124 bits (312), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 105 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 159 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 217
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 218 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 277
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 278 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 107 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 161 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 219
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 220 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 279
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 280 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 124 bits (311), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 105 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 159 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 217
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT V+ P + +L+ H W
Sbjct: 218 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLK 277
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 278 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 318
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLSQVIQM------ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP+ +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 123 bits (309), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 117/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T E++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MTPEVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 123 bits (309), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLSQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP+ +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLSQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP+ +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLSQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP+ +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 118/221 (53%), Gaps = 17/221 (7%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FEY++ F+ + ++ +Y+L K + +CH GI+HRD+KPHN+++
Sbjct: 126 LIFEYVNN------TDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
Query: 77 DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
D + L++ D GLA F P K+Y + + +++ PE+L+ Y ++DMWS+ C+FA
Sbjct: 180 DHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFA 238
Query: 137 ELV-TKTALFPGDSELQQLLHIFRLLGTPNEKVW---------PGVSSLMNWHEYPQWNP 186
++ K F G QL+ I ++LGT + P + +L+ H W
Sbjct: 239 GMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLK 298
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
A + + +D L+++L+YD +R++A +AM HPYF
Sbjct: 299 FMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPYF 339
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 122 bits (305), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 117/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP+ +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR E++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MEPEVVTRYYRAPEVILG-MGYKENVDLWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E+V LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 215 MGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR E++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MEPEVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E+V LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 215 MGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPTVRNYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 113/231 (48%), Gaps = 31/231 (13%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 102 VYLVMELMDANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 155
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR + T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 156 VV-KSDCTLKILDFGLARTASTNFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 212
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTP-----------------NEKVWPGVSSLMN 177
ELV + +F G + Q + LGTP N +PG++
Sbjct: 213 MGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIA---- 268
Query: 178 WHE-YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ E +P W S + DLL +ML DP KRIS +A+ HPY
Sbjct: 269 FEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 105 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 159 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 215
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 216 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV--ENRPKYAGYSFE 273
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 274 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 323
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 120 bits (302), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 120 bits (302), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 109 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 162
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 163 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCI 219
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E+V LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 220 MGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV--ENRPKYAGYSFE 277
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 278 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 327
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 120 bits (301), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 98 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 151
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 152 VV-KSDCTLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCI 208
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E+V LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 209 MGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV--ENRPKYAGYSFE 266
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 267 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLSQVIQM------ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV I
Sbjct: 158 VV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP+ +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 116/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYIVMELMDANLSQVIQM------ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y VD+WSV I
Sbjct: 158 VV-KSDATLKILDFGLARTAGTSFM-MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP+ +K+ P V + + P++ S
Sbjct: 215 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV--ENRPKYAGYSFE 272
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 273 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 120 bits (300), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 112/227 (49%), Gaps = 23/227 (10%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+YLV E MD +L + I + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 104 VYLVMELMDANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR T ++T +YRAPEV+LG Y+ VD+WSV CI
Sbjct: 158 VV-KSDCTLKILDFGLARTACTNFM-MTPYVVTRYYRAPEVILG-MGYAANVDIWSVGCI 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS-SLMNWHE------------- 180
ELV +F G + Q + LGTP+ + + ++ N+ E
Sbjct: 215 MGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEEL 274
Query: 181 YPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+P W S + DLL +ML DP KRIS +A+ HPY
Sbjct: 275 FPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 120 bits (300), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 115/230 (50%), Gaps = 27/230 (11%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E MD +L + I+ + + L+YQ+ G+ H GI+HRDLKP N+
Sbjct: 106 VYIVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 159
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
++ + TLKI D GLAR ++T +YRAPEV+LG Y VD+WSV CI
Sbjct: 160 VV-KSDCTLKILDFGLARTAGTSFMMVPF-VVTRYYRAPEVILG-MGYKENVDIWSVGCI 216
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPN----EKVWPGVSSLMNWHEYPQWNPQSLA 190
E++ LFPG + Q + LGTP +K+ P V + + P++ S
Sbjct: 217 MGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV--ENRPKYAGYSFE 274
Query: 191 TAVPNL------------DKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
P++ DLL +ML D SKRIS +A++HPY +
Sbjct: 275 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 324
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 123/253 (48%), Gaps = 48/253 (18%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
R + + FE + +L + I+ + G ++P+ V+ + + + + H + I+H DLKP
Sbjct: 171 RNHICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFAHSILQCLDALHKNRIIHCDLKP 228
Query: 72 HNLLMDRKTMT-LKIADLGLA-----RAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTA 125
N+L+ ++ + +K+ D G + R +T I + +YRAPEV+LG+ Y
Sbjct: 229 ENILLKQQGRSGIKVIDFGSSCYEHQRVYT--------XIQSRFYRAPEVILGA-RYGMP 279
Query: 126 VDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW---HEYP 182
+DMWS+ CI AEL+T L PG+ E QL + LLG P++K+ N+ YP
Sbjct: 280 IDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYP 339
Query: 183 QWN-------------------------PQSL--ATAVPNLDKD-GLDLLEQMLQYDPSK 214
++ P+S A+ D LD L+Q L++DP+
Sbjct: 340 RYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAV 399
Query: 215 RISAKKAMEHPYF 227
R++ +A+ HP+
Sbjct: 400 RMTPGQALRHPWL 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 38/248 (15%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
R + + FE + +L + I+ + G ++P+ V+ + + + + H + I+H DLKP
Sbjct: 171 RNHICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFAHSILQCLDALHKNRIIHCDLKP 228
Query: 72 HNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
N+L+ ++ + +K+ D G + ++ I + +YRAPEV+LG+ Y +DMWS
Sbjct: 229 ENILLKQQGRSGIKVIDFG---SSCYEHQRVYTXIQSRFYRAPEVILGA-RYGMPIDMWS 284
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW---HEYPQWN-- 185
+ CI AEL+T L PG+ E QL + LLG P++K+ N+ YP++
Sbjct: 285 LGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTV 344
Query: 186 -----------------------PQSL--ATAVPNLDKD-GLDLLEQMLQYDPSKRISAK 219
P+S A+ D LD L+Q L++DP+ R++
Sbjct: 345 TTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404
Query: 220 KAMEHPYF 227
+A+ HP+
Sbjct: 405 QALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 38/248 (15%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
R + + FE + +L + I+ + G ++P+ V+ + + + + H + I+H DLKP
Sbjct: 171 RNHICMTFELLSMNLYELIKKNKFQGFSLPL--VRKFAHSILQCLDALHKNRIIHCDLKP 228
Query: 72 HNLLMDRKTMT-LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
N+L+ ++ + +K+ D G + ++ I + +YRAPEV+LG+ Y +DMWS
Sbjct: 229 ENILLKQQGRSGIKVIDFG---SSCYEHQRVYXXIQSRFYRAPEVILGA-RYGMPIDMWS 284
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNW---HEYPQWN-- 185
+ CI AEL+T L PG+ E QL + LLG P +K+ N+ YP++
Sbjct: 285 LGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTV 344
Query: 186 -----------------------PQSL--ATAVPNLDKD-GLDLLEQMLQYDPSKRISAK 219
P+S A+ D LD L+Q L++DP+ R++
Sbjct: 345 TTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404
Query: 220 KAMEHPYF 227
+A+ HP+
Sbjct: 405 QALRHPWL 412
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 95/185 (51%), Gaps = 29/185 (15%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEI 105
++ Q+ GV + H H I+HRDLKP NLL++ K +KI D GL+ F KK +
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ-KKMKERL 199
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T +Y APEVL Y D+WS+ I L+ F G ++ Q++L
Sbjct: 200 GTAYYIAPEVL--RKKYDEKCDVWSIGVILFILLAGYPPFGGQTD-QEILR--------- 247
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
KV G + + P+W N+ + DL++QMLQ+D +RISA++A+EHP
Sbjct: 248 -KVEKGKYTF----DSPEW---------KNVSEGAKDLIKQMLQFDSQRRISAQQALEHP 293
Query: 226 YFDDL 230
+ ++
Sbjct: 294 WIKEM 298
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 109/226 (48%), Gaps = 38/226 (16%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM---------------DRKTMT---L 83
++ ++ + YQ+CK V F H + + H DLKP N+L D +T+ +
Sbjct: 117 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
Query: 84 KIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTA 143
K+ D G A T + ++ + T YRAPEV+L + +S D+WS+ CI E
Sbjct: 177 KVVDFGSA---TYDDEHHSTLVSTRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFT 232
Query: 144 LFPGDSELQQLLHIFRLLG-TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPN------- 195
+FP + L + R+LG P + H+ W+ S A +
Sbjct: 233 VFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK 292
Query: 196 ---LDKDG-----LDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 233
L +D DL+++ML+YDP+KRI+ ++A++HP+FD L K+
Sbjct: 293 EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 112/239 (46%), Gaps = 32/239 (13%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH-GILHRDLKPHNLL 75
+VFE + +L I+ + G IP+ VK + QL G+ + H GI+H D+KP N+L
Sbjct: 107 MVFEVLGENLLALIKKYEHRG--IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164
Query: 76 MD-----RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
M+ + +KIADLG A + + YT+ I T YR+PEVLLG+ + D+WS
Sbjct: 165 MEIVDSPENLIQIKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWS 220
Query: 131 VACIFAELVTKTALFPGDS------ELQQLLHIFRLLGT-PNEKVWPGVSS--------- 174
AC+ EL+T LF D + + I LLG P+ + G +
Sbjct: 221 TACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL 280
Query: 175 LMNWHEYPQWNPQSLATAVPNLDKDGL----DLLEQMLQYDPSKRISAKKAMEHPYFDD 229
L N + W + + T KD D L MLQ DP KR A + HP+ D
Sbjct: 281 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 112/239 (46%), Gaps = 32/239 (13%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH-GILHRDLKPHNLL 75
+VFE + +L I+ + G IP+ VK + QL G+ + H GI+H D+KP N+L
Sbjct: 107 MVFEVLGENLLALIKKYEHRG--IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164
Query: 76 MD-----RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
M+ + +KIADLG A + + YT+ I T YR+PEVLLG+ + D+WS
Sbjct: 165 MEIVDSPENLIQIKIADLGNACWYD---EHYTNSIQTREYRSPEVLLGAP-WGCGADIWS 220
Query: 131 VACIFAELVTKTALFPGDS------ELQQLLHIFRLLGT-PNEKVWPGVSS--------- 174
AC+ EL+T LF D + + I LLG P+ + G +
Sbjct: 221 TACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL 280
Query: 175 LMNWHEYPQWNPQSLATAVPNLDKDGL----DLLEQMLQYDPSKRISAKKAMEHPYFDD 229
L N + W + + T KD D L MLQ DP KR A + HP+ D
Sbjct: 281 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 94.0 bits (232), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 38/226 (16%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM---------------DRKTMT---L 83
++ ++ + YQ+CK V F H + + H DLKP N+L D +T+ +
Sbjct: 117 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI 176
Query: 84 KIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTA 143
K+ D G A T + ++ + YRAPEV+L + +S D+WS+ CI E
Sbjct: 177 KVVDFGSA---TYDDEHHSTLVXXRHYRAPEVIL-ALGWSQPCDVWSIGCILIEYYLGFT 232
Query: 144 LFPGDSELQQLLHIFRLLG-TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPN------- 195
+FP + L + R+LG P + H+ W+ S A +
Sbjct: 233 VFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLK 292
Query: 196 ---LDKDG-----LDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKT 233
L +D DL+++ML+YDP+KRI+ ++A++HP+FD L K+
Sbjct: 293 EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKS 338
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH--GILHRDL 69
R L LVFE + +L +R+ G + +N + Q+C + F I+H DL
Sbjct: 128 RNHLCLVFEMLSYNLYDLLRNTNFRG--VSLNLTRKFAQQMCTALLFLATPELSIIHCDL 185
Query: 70 KPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
KP N+L+ + K +KI D G + ++ I + +YR+PEVLLG Y A+DM
Sbjct: 186 KPENILLCNPKRXAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-YDLAIDM 241
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY---PQWN 185
WS+ CI E+ T LF G +E+ Q+ I +LG P + + E WN
Sbjct: 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWN 301
Query: 186 PQ---------------------SLATAVPNLDKDG------------LDLLEQMLQYDP 212
+ + T P + G DL+ +ML YDP
Sbjct: 302 LKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP 361
Query: 213 SKRISAKKAMEHPYF 227
RI A++H +F
Sbjct: 362 KTRIQPYYALQHSFF 376
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH--GILHRDL 69
R L LVFE + +L +R+ G + +N + Q+C + F I+H DL
Sbjct: 128 RNHLCLVFEMLSYNLYDLLRNTNFRG--VSLNLTRKFAQQMCTALLFLATPELSIIHCDL 185
Query: 70 KPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
KP N+L+ + K +KI D G + ++ I + +YR+PEVLLG Y A+DM
Sbjct: 186 KPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-YDLAIDM 241
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY---PQWN 185
WS+ CI E+ T LF G +E+ Q+ I +LG P + + E WN
Sbjct: 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWN 301
Query: 186 PQ---------------------SLATAVPNLDKDG------------LDLLEQMLQYDP 212
+ + T P + G DL+ +ML YDP
Sbjct: 302 LKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP 361
Query: 213 SKRISAKKAMEHPYF 227
RI A++H +F
Sbjct: 362 KTRIQPYYALQHSFF 376
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 109/255 (42%), Gaps = 45/255 (17%)
Query: 12 RTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH--GILHRDL 69
R L LVFE + +L +R+ G + +N + Q+C + F I+H DL
Sbjct: 109 RNHLCLVFEMLSYNLYDLLRNTNFRG--VSLNLTRKFAQQMCTALLFLATPELSIIHCDL 166
Query: 70 KPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
KP N+L+ + K +KI D G + ++ I + +YR+PEVLLG Y A+DM
Sbjct: 167 KPENILLCNPKRSAIKIVDFGSSCQLG---QRIYQXIQSRFYRSPEVLLGMP-YDLAIDM 222
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY---PQWN 185
WS+ CI E+ T LF G +E+ Q+ I +LG P + + E WN
Sbjct: 223 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWN 282
Query: 186 PQ---------------------SLATAVPNLDKDG------------LDLLEQMLQYDP 212
+ + T P + G DL+ +ML YDP
Sbjct: 283 LKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDP 342
Query: 213 SKRISAKKAMEHPYF 227
RI A++H +F
Sbjct: 343 KTRIQPYYALQHSFF 357
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 29/181 (16%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEI 105
++ Q+ G+ + H H I+HRDLKP N+L++ K +KI D GL+ F K I
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRI 184
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T +Y APEVL G+ Y D+WS I L++ T F G +E L
Sbjct: 185 GTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDIL----------- 231
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++V G + + PQW + D DL+ +ML + PS RI+A + +EHP
Sbjct: 232 KRVETGKYAF----DLPQWR---------TISDDAKDLIRKMLTFHPSLRITATQCLEHP 278
Query: 226 Y 226
+
Sbjct: 279 W 279
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 34/229 (14%)
Query: 10 EGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + YLV E Y +L I S ++ E V+ + ++ Q+ G+ + H + I+HRD
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-IIRQVLSGITYMHKNKIVHRD 151
Query: 69 LKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
LKP NLL++ K+ ++I D GL+ F KK +I T +Y APEVL G+ Y
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT--YDEKC 208
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L++ F G +E L +KV G + E PQW
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDIL-----------KKVEKGKYTF----ELPQWKK 253
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 235
S + DL+ +ML Y PS RISA+ A++H + K ++
Sbjct: 254 VSESAK---------DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 293
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 34/229 (14%)
Query: 10 EGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + YLV E Y +L I S ++ E V+ + ++ Q+ G+ + H + I+HRD
Sbjct: 119 EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-IIRQVLSGITYMHKNKIVHRD 174
Query: 69 LKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
LKP NLL++ K+ ++I D GL+ F KK +I T +Y APEVL G+ Y
Sbjct: 175 LKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT--YDEKC 231
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L++ F G +E L +KV G + E PQW
Sbjct: 232 DVWSTGVILYILLSGCPPFNGANEYDIL-----------KKVEKGKYTF----ELPQWKK 276
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 235
S + DL+ +ML Y PS RISA+ A++H + K ++
Sbjct: 277 VSESAK---------DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 316
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 110/229 (48%), Gaps = 34/229 (14%)
Query: 10 EGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + YLV E Y +L I S ++ E V+ + ++ Q+ G+ + H + I+HRD
Sbjct: 120 EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-IIRQVLSGITYMHKNKIVHRD 175
Query: 69 LKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
LKP NLL++ K+ ++I D GL+ F KK +I T +Y APEVL G+ Y
Sbjct: 176 LKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT--YDEKC 232
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L++ F G +E L +KV G + E PQW
Sbjct: 233 DVWSTGVILYILLSGCPPFNGANEYDIL-----------KKVEKGKYTF----ELPQWKK 277
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 235
S + DL+ +ML Y PS RISA+ A++H + K ++
Sbjct: 278 VSESAK---------DLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 317
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 10 EGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + Y+V E Y +L I ++ E+ +K Q+ G+ + H H I+HRD
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHKHNIVHRD 146
Query: 69 LKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
LKP N+L++ K +KI D GL+ F K I T +Y APEVL G+ Y
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT--YDEKC 203
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L++ T F G +E L ++V G + + PQW
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDIL-----------KRVETGKYAF----DLPQWR- 247
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
+ D DL+ +ML + PS RI+A + +EHP+
Sbjct: 248 --------TISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 34/220 (15%)
Query: 10 EGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + Y+V E Y +L I ++ E+ +K Q+ G+ + H H I+HRD
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK----QVFSGITYMHKHNIVHRD 146
Query: 69 LKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
LKP N+L++ K +KI D GL+ F K I T +Y APEVL G+ Y
Sbjct: 147 LKPENILLESKEKDCDIKIIDFGLSTCFQQNT-KMKDRIGTAYYIAPEVLRGT--YDEKC 203
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L++ T F G +E L ++V G + + PQW
Sbjct: 204 DVWSAGVILYILLSGTPPFYGKNEYDIL-----------KRVETGKYAF----DLPQWR- 247
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
+ D DL+ +ML + PS RI+A + +EHP+
Sbjct: 248 --------TISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 107/220 (48%), Gaps = 34/220 (15%)
Query: 10 EGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + YLV E Y +L I S ++ E V+ + ++ Q+ G+ + H + I+HRD
Sbjct: 102 EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-IIRQVLSGITYMHKNKIVHRD 157
Query: 69 LKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
LKP NLL++ K+ ++I D GL+ F KK +I T +Y APEVL G+ Y
Sbjct: 158 LKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKIGTAYYIAPEVLHGT--YDEKC 214
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L++ F G +E L +KV G + E PQW
Sbjct: 215 DVWSTGVILYILLSGCPPFNGANEYDIL-----------KKVEKGKYTF----ELPQWKK 259
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
S + DL+ +ML Y PS RISA+ A++H +
Sbjct: 260 VSESAK---------DLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 104/226 (46%), Gaps = 42/226 (18%)
Query: 41 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMT 82
P++ V+ + +QLC+ V F H + + H DLKP N+L K+
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTA 194
Query: 83 LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKT 142
+++ D G A T + ++ + T YRAPEV+L +S D+WS+ CI E
Sbjct: 195 VRVVDFGSA---TFDHEHHSTIVSTRHYRAPEVIL-ELGWSQPCDVWSIGCIIFEYYVGF 250
Query: 143 ALFPGDSELQQLLHIFRLLG---------TPNEKVWPGVSSLMNWHE------YPQWNPQ 187
LF + L + R+LG T +K + ++W E Y + N +
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYF--YRGRLDWDENTSAGRYVRENCK 308
Query: 188 SLA---TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
L T+ DL+E ML+Y+P+KR++ +A++HP+F L
Sbjct: 309 PLRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 42/230 (18%)
Query: 10 EGRTVLYLVFEY-----MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGI 64
E +YLV E M+ LK ++ F + N + M+Q+ G+ + H HGI
Sbjct: 81 EDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE-------NEARHFMHQIITGMLYLHSHGI 133
Query: 65 LHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYST 124
LHRDL NLL+ R M +KIAD GLA +P +K+ T Y +PE+ S H
Sbjct: 134 LHRDLTLSNLLLTR-NMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH-GL 191
Query: 125 AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQW 184
D+WS+ C+F L+ F D+ + T N+ V +E P +
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDT----------VKNTLNKVVLAD-------YEMPSF 234
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTR 234
L + DL+ Q+L+ +P+ R+S ++HP+ T+
Sbjct: 235 -----------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTK 273
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 106/221 (47%), Gaps = 34/221 (15%)
Query: 10 EGRTVLYLVFE-YMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + YLV E Y +L I S ++ E V+ + ++ Q+ G+ + H + I+HRD
Sbjct: 96 EDKGYFYLVGEVYTGGELFDEIISRKRFSE---VDAAR-IIRQVLSGITYXHKNKIVHRD 151
Query: 69 LKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
LKP NLL++ K+ ++I D GL+ F KK +I T +Y APEVL G+ Y
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKXKDKIGTAYYIAPEVLHGT--YDEKC 208
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L++ F G +E L +KV G + E PQW
Sbjct: 209 DVWSTGVILYILLSGCPPFNGANEYDIL-----------KKVEKGKYTF----ELPQWKK 253
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
S + DL+ + L Y PS RISA+ A++H +
Sbjct: 254 VSESAK---------DLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 29/182 (15%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT--LKIADLGLARAFTLPIKKYTHEI 105
+M Q+ G + H H I+HRDLKP NLL++ K+ +KI D GL+ F + K +
Sbjct: 109 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL 167
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T +Y APEVL Y D+WS I L+ F G ++ Q++L
Sbjct: 168 GTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD-QEIL---------- 214
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++V G S + P W S + L++ ML Y+PSKRISA++A+ HP
Sbjct: 215 KRVEKGKFSF----DPPDWTQVS---------DEAKQLVKLMLTYEPSKRISAEEALNHP 261
Query: 226 YF 227
+
Sbjct: 262 WI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 29/182 (15%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEI 105
+M Q+ G + H H I+HRDLKP NLL++ K+ +KI D GL+ F + K +
Sbjct: 126 IMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL 184
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T +Y APEVL Y D+WS I L+ F G ++ Q++L
Sbjct: 185 GTAYYIAPEVL--RKKYDEKCDVWSCGVILYILLCGYPPFGGQTD-QEIL---------- 231
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++V G S + P W + + L++ ML Y+PSKRISA++A+ HP
Sbjct: 232 KRVEKGKFSF----DPPDWT---------QVSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
Query: 226 YF 227
+
Sbjct: 279 WI 280
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 107/226 (47%), Gaps = 38/226 (16%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--VKSLMYQLCKGVAFCHGHGILHR 67
E + ++LVF DL + F E + ++ +S+M L + V+F H + I+HR
Sbjct: 170 ESSSFMFLVF-----DLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHR 224
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL---LGSTH--Y 122
DLKP N+L+D M ++++D G + P +K T Y APE+L + TH Y
Sbjct: 225 DLKPENILLD-DNMQIRLSDFGFS-CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGY 282
Query: 123 STAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
VD+W+ I L+ + F ++ L I E + S P
Sbjct: 283 GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIM-------EGQYQFSS--------P 327
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+W+ +S DL+ ++LQ DP R++A++A++HP+F+
Sbjct: 328 EWDDRSSTVK---------DLISRLLQVDPEARLTAEQALQHPFFE 364
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 97/219 (44%), Gaps = 45/219 (20%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+++V EY+ +L YI + E + L Q+ GV +CH H ++HRDLKP N
Sbjct: 91 IFMVMEYVSGGELFDYICKNGRLDEK----ESRRLFQQILSGVDYCHRHMVVHRDLKPEN 146
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW-----YRAPEVLLGSTHYSTAVDM 128
+L+D M KIAD GL+ + E L Y APEV+ G + VD+
Sbjct: 147 VLLD-AHMNAKIADFGLSNMMS------DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDI 199
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS I L+ T F D H+ L +K+ G+ + PQ
Sbjct: 200 WSSGVILYALLCGTLPFDDD-------HVPTLF----KKICDGIF----------YTPQY 238
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
L +V + LL+ MLQ DP KR + K EH +F
Sbjct: 239 LNPSV-------ISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 44/227 (19%)
Query: 41 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMT 82
P+ V+ + YQLC + F H + + H DLKP N+L K +
Sbjct: 121 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180
Query: 83 LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKT 142
+++AD G A T + +T + T YR PEV+L ++ D+WS+ CI E
Sbjct: 181 IRVADFGSA---TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGF 236
Query: 143 ALFPGDSELQQLLHIFRLLG---------TPNEK-------VWPGVSSLMNWHEYPQWNP 186
LF + L+ + ++LG T +K VW SS Y + N
Sbjct: 237 TLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR---YVKENC 293
Query: 187 QSLATAV--PNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
+ L + + +L+ L DL+ +ML++DP++RI+ +A+ HP+F L
Sbjct: 294 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 44/227 (19%)
Query: 41 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMT 82
P+ V+ + YQLC + F H + + H DLKP N+L K +
Sbjct: 130 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 189
Query: 83 LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKT 142
+++AD G A T + +T + T YR PEV+L ++ D+WS+ CI E
Sbjct: 190 IRVADFGSA---TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGF 245
Query: 143 ALFPGDSELQQLLHIFRLLG---------TPNEK-------VWPGVSSLMNWHEYPQWNP 186
LF + L+ + ++LG T +K VW SS Y + N
Sbjct: 246 TLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR---YVKENC 302
Query: 187 QSLATAV--PNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
+ L + + +L+ L DL+ +ML++DP++RI+ +A+ HP+F L
Sbjct: 303 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 105/227 (46%), Gaps = 44/227 (19%)
Query: 41 PVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM------------------DRKTMT 82
P+ V+ + YQLC + F H + + H DLKP N+L K +
Sbjct: 153 PLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 212
Query: 83 LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKT 142
+++AD G A T + +T + T YR PEV+L ++ D+WS+ CI E
Sbjct: 213 IRVADFGSA---TFDHEHHTTIVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGF 268
Query: 143 ALFPGDSELQQLLHIFRLLG---------TPNEK-------VWPGVSSLMNWHEYPQWNP 186
LF + L+ + ++LG T +K VW SS Y + N
Sbjct: 269 TLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGR---YVKENC 325
Query: 187 QSLATAV--PNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYFDDL 230
+ L + + +L+ L DL+ +ML++DP++RI+ +A+ HP+F L
Sbjct: 326 KPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 7 QNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
Q KE L+ V EY++ DL +I Q+ ++ ++ G+ F H GI+
Sbjct: 89 QTKEN---LFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIILGLQFLHSKGIV 141
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTA 125
+RDLK N+L+D K +KIAD G+ + L K T Y APE+LLG Y+ +
Sbjct: 142 YRDLKLDNILLD-KDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQK-YNHS 199
Query: 126 VDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWN 185
VD WS + E++ + F G E ++L H R M+ YP+W
Sbjct: 200 VDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIR----------------MDNPFYPRW- 241
Query: 186 PQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM-EHPYFDDLD 231
L+K+ DLL ++ +P KR+ + + +HP F +++
Sbjct: 242 ----------LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 278
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 39/227 (17%)
Query: 7 QNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
Q KE L+ V EY++ DL +I Q+ ++ ++ G+ F H GI+
Sbjct: 88 QTKEN---LFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIILGLQFLHSKGIV 140
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTA 125
+RDLK N+L+D K +KIAD G+ + L K T Y APE+LLG Y+ +
Sbjct: 141 YRDLKLDNILLD-KDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK-YNHS 198
Query: 126 VDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWN 185
VD WS + E++ + F G E ++L H R M+ YP+W
Sbjct: 199 VDWWSFGVLLYEMLIGQSPFHGQDE-EELFHSIR----------------MDNPFYPRW- 240
Query: 186 PQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM-EHPYFDDLD 231
L+K+ DLL ++ +P KR+ + + +HP F +++
Sbjct: 241 ----------LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 99/221 (44%), Gaps = 45/221 (20%)
Query: 13 TVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
T ++V EY+ +L YI + E + L Q+ V +CH H ++HRDLKP
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEM----EARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-----TLWYRAPEVLLGSTHYSTAV 126
N+L+D M KIAD GL+ + E L + Y APEV+ G + V
Sbjct: 140 ENVLLD-AHMNAKIADFGLSNMMS------DGEFLRDSCGSPNYAAPEVISGRLYAGPEV 192
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L+ T P D E H+ L +K+ GV + P++
Sbjct: 193 DIWSCGVILYALLCGT--LPFDDE-----HVPTLF----KKIRGGVFYI------PEYLN 235
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+S+AT LL MLQ DP KR + K EH +F
Sbjct: 236 RSVAT-----------LLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 98/221 (44%), Gaps = 45/221 (20%)
Query: 13 TVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
T ++V EY+ +L YI + E + L Q+ V +CH H ++HRDLKP
Sbjct: 84 TDFFMVMEYVSGGELFDYICKHGRVEEM----EARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW-----YRAPEVLLGSTHYSTAV 126
N+L+D M KIAD GL+ + E L Y APEV+ G + V
Sbjct: 140 ENVLLD-AHMNAKIADFGLSNMMS------DGEFLRTSCGSPNYAAPEVISGRLYAGPEV 192
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
D+WS I L+ T P D E H+ L +K+ GV + P++
Sbjct: 193 DIWSCGVILYALLCGT--LPFDDE-----HVPTLF----KKIRGGVFYI------PEYLN 235
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+S+AT LL MLQ DP KR + K EH +F
Sbjct: 236 RSVAT-----------LLMHMLQVDPLKRATIKDIREHEWF 265
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 39/222 (17%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E +++V EY +L YI S + E + + Q+ VA+ H G HRD
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEE----ETRVVFRQIVSAVAYVHSQGYAHRD 133
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYSTAV 126
LKP NLL D + LK+ D GL A K Y + +L Y APE++ G ++ +
Sbjct: 134 LKPENLLFD-EYHKLKLIDFGLC-AKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQW-N 185
D+WS+ + L+ F D+ + I R ++ P+W +
Sbjct: 192 DVWSMGILLYVLMCGFLPFDDDNVMALYKKIMR-----------------GKYDVPKWLS 234
Query: 186 PQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P S+ LL+QMLQ DP KRIS K + HP+
Sbjct: 235 PSSIL------------LLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 88/178 (49%), Gaps = 29/178 (16%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHE 104
++M Q+ G+ + H H I+HRD+KP N+L++ K + +KI D GL+ F+ K
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY-KLRDR 208
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T +Y APEVL Y+ D+WS I L+ F G ++ Q ++
Sbjct: 209 LGTAYYIAPEVL--KKKYNEKCDVWSCGVIMYILLCGYPPFGGQND-QDII--------- 256
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 222
+KV G + ++ W N+ + +L++ ML YD +KR +A++A+
Sbjct: 257 -KKVEKGKY----YFDFNDW---------KNISDEAKELIKLMLTYDYNKRCTAEEAL 300
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 98/222 (44%), Gaps = 29/222 (13%)
Query: 14 VLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
+LY+VFE+MD DL I G M Q+ + + +CH + I+HRD+KP
Sbjct: 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPE 159
Query: 73 NLLMDRK--TMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
N+L+ K + +K+ D G+A + T + APEV + Y VD+W
Sbjct: 160 NVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPYGKPVDVWG 218
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
I L++ F G E +F + K+ P QW+
Sbjct: 219 CGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNP-----------RQWS----- 257
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
++ + DL+ +ML DP++RI+ +A+ HP+ + D+
Sbjct: 258 ----HISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E + + LV EY+D + + R ++ ++T+ M Q+C+G+ H ILH DL
Sbjct: 156 ESKNDIVLVMEYVDGG-ELFDRIIDESYNLTELDTI-LFMKQICEGIRHMHQMYILHLDL 213
Query: 70 KPHNLL-MDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
KP N+L ++R +KI D GLAR + P +K T + APEV + S DM
Sbjct: 214 KPENILCVNRDAKQIKIIDFGLARRYK-PREKLKVNFGTPEFLAPEV-VNYDFVSFPTDM 271
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WSV I L++ + F GD++ + L +I +W+ +
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILAC----------------------RWDLED 309
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
++ ++ + + ++L + S RISA +A++HP+ D
Sbjct: 310 --EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 3/135 (2%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
L +V E D DL + I+ F++ IP TV QLC + H ++HRD+KP N
Sbjct: 107 LNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN 166
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+ + T +K+ DLGL R F+ + T +Y +PE + Y+ D+WS+ C
Sbjct: 167 VFIT-ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE-RIHENGYNFKSDIWSLGC 224
Query: 134 IFAELVTKTALFPGD 148
+ E+ + F GD
Sbjct: 225 LLYEMAALQSPFYGD 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 45/235 (19%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAFCHGHGILHRDLK 70
LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA H I+HRDLK
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLHSLKIIHRDLK 160
Query: 71 PHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL----TLWYRAPE 114
P N+L+ D++T + + I+D GL + + + T +RAPE
Sbjct: 161 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 115 VLLGST--HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 172
+L ST + ++D++S+ C+F +++K GD ++ + G+
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------------SNIIRGI 268
Query: 173 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
SL E + +SL + DL+ QM+ +DP KR +A K + HP F
Sbjct: 269 FSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 45/235 (19%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAFCHGHGILHRDLK 70
LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA H I+HRDLK
Sbjct: 102 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLHSLKIIHRDLK 160
Query: 71 PHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL----TLWYRAPE 114
P N+L+ D++T + + I+D GL + + + T +RAPE
Sbjct: 161 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 115 VLLGST--HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 172
+L ST + ++D++S+ C+F +++K GD ++ + G+
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------------SNIIRGI 268
Query: 173 SSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
SL E + +SL + DL+ QM+ +DP KR +A K + HP F
Sbjct: 269 FSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 115/279 (41%), Gaps = 73/279 (26%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHG-ILHRDLKPHNLL 75
+VFE + L K+I + + +PV VKS++ Q+ +G+ + H I+H D+KP N+L
Sbjct: 116 MVFEVLGHHLLKWI--IKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENIL 173
Query: 76 M----------------------------------------------DRKTMTLKIADLG 89
M + + +KIADLG
Sbjct: 174 MCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLG 233
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
A K +T +I T YR+ EVL+G+ YST D+WS AC+ EL T LF S
Sbjct: 234 NA---CWVHKHFTEDIQTRQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDYLFEPHS 289
Query: 150 ------ELQQLLHIFRLLGT-PNEKVWPGVSSLMNWHEYPQ------WNPQSLATAV--- 193
+ + HI LLG+ P G S ++ + P SL +
Sbjct: 290 GEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEK 349
Query: 194 ---PNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYFD 228
P+ D D L ML+ P KR SA + + HP+ +
Sbjct: 350 YGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 388
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 29/222 (13%)
Query: 14 VLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
+LY+VFE+MD DL I G M Q+ + + +CH + I+HRD+KPH
Sbjct: 102 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPH 161
Query: 73 NLLMDRK--TMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ K + +K+ G+A + T + APEV + Y VD+W
Sbjct: 162 CVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPYGKPVDVWG 220
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
I L++ F G E +F + K+ P QW+
Sbjct: 221 CGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNP-----------RQWS----- 259
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
++ + DL+ +ML DP++RI+ +A+ HP+ + D+
Sbjct: 260 ----HISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 297
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 49/239 (20%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAFCHGHGILHRDLK 70
LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA H I+HRDLK
Sbjct: 84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLHSLKIIHRDLK 142
Query: 71 PHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL----TLWYRAPE 114
P N+L+ D++T + + I+D GL + + + T +RAPE
Sbjct: 143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202
Query: 115 VLLGSTHYST------AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
+L S + T ++D++S+ C+F +++K GD ++ +
Sbjct: 203 LLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------------SNI 250
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
G+ SL E + +SL + DL+ QM+ +DP KR +A K + HP F
Sbjct: 251 IRGIFSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 49/239 (20%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPV----NTVKSLMYQLCKGVAFCHGHGILHRDLK 70
LY+ E + +L+ + S + EN+ + N + SL+ Q+ GVA H I+HRDLK
Sbjct: 84 LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI-SLLRQIASGVAHLHSLKIIHRDLK 142
Query: 71 PHNLLM--------DRKT----MTLKIADLGLARAFTLPIKKYTHEIL----TLWYRAPE 114
P N+L+ D++T + + I+D GL + + + T +RAPE
Sbjct: 143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 202
Query: 115 VLLGSTHYST------AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
+L S + T ++D++S+ C+F +++K GD ++ +
Sbjct: 203 LLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE------------SNI 250
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
G+ SL E + +SL + DL+ QM+ +DP KR +A K + HP F
Sbjct: 251 IRGIFSL---DEMKCLHDRSLIA-------EATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 29/222 (13%)
Query: 14 VLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
+LY+VFE+MD DL I G M Q+ + + +CH + I+HRD+KPH
Sbjct: 100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPH 159
Query: 73 NLLMDRK--TMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ K + +K+ G+A + T + APEV + Y VD+W
Sbjct: 160 CVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEV-VKREPYGKPVDVWG 218
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
I L++ F G E +F + K+ P QW+
Sbjct: 219 CGVILFILLSGCLPFYGTKE-----RLFEGIIKGKYKMNP-----------RQWS----- 257
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
++ + DL+ +ML DP++RI+ +A+ HP+ + D+
Sbjct: 258 ----HISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDR 295
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
G+ L ++ E M+ + + R + + +M + + F H H I HRD+K
Sbjct: 97 GKRCLLIIMECMEGG-ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 155
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL K LK+ D G A+ T T +Y APEV LG Y + DM
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYYVAPEV-LGPEKYDKSCDM 212
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F ++ + + PG+ + +Y P+W
Sbjct: 213 WSLGVIMYILLCGFPPFYSNT---------------GQAISPGMKRRIRLGQYGFPNPEW 257
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ + +D L+ +L+ DP++R++ + M HP+ +
Sbjct: 258 S---------EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 94/224 (41%), Gaps = 34/224 (15%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
G+ L ++ E M+ + + R + + +M + + F H H I HRD+K
Sbjct: 78 GKRCLLIIMECMEGG-ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 136
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL K LK+ D G A+ T T +Y APEV LG Y + DM
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQ--NALQTPCYTPYYVAPEV-LGPEKYDKSCDM 193
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F ++ + + PG+ + +Y P+W
Sbjct: 194 WSLGVIMYILLCGFPPFYSNT---------------GQAISPGMKRRIRLGQYGFPNPEW 238
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
+ + +D L+ +L+ DP++R++ + M HP+ +
Sbjct: 239 S---------EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 273
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 44 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKY 101
T K YQ+ V + H +GI+HRDLKP N+L+ + +KI D G ++ I
Sbjct: 254 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGE 308
Query: 102 THEILTLW----YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
T + TL Y APEVL +G+ Y+ AVD WS+ I L + +P SE + +
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQV 365
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
+ + + P V W E + + LDL++++L DP R
Sbjct: 366 SLKDQITSGKYNFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKAR 405
Query: 216 ISAKKAMEHPYFDDLDKTR 234
+ ++A+ HP+ D D R
Sbjct: 406 FTTEEALRHPWLQDEDMKR 424
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 31/216 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V E + +L + I S + G+ + V LM Q+ +A+ H ++H+DLKP N
Sbjct: 95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPEN 154
Query: 74 LLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L + +KI D GLA F + T+ T Y APEV + D+WS
Sbjct: 155 ILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEVFKRDVTFK--CDIWSA 211
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
+ L+T F G +SL + + + A
Sbjct: 212 GVVMYFLLTGCLPFTG-------------------------TSLEEVQQKATYKEPNYAV 246
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
L +DLL+QML DP +R SA + + H +F
Sbjct: 247 ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 44 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD--RKTMTLKIADLGLARAFTLPIKKY 101
T K YQ+ V + H +GI+HRDLKP N+L+ + +KI D G ++ I
Sbjct: 240 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGE 294
Query: 102 THEILTLW----YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
T + TL Y APEVL +G+ Y+ AVD WS+ I L + +P SE + +
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQV 351
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
+ + + P V W E + + LDL++++L DP R
Sbjct: 352 SLKDQITSGKYNFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKAR 391
Query: 216 ISAKKAMEHPYFDDLDKTR 234
+ ++A+ HP+ D D R
Sbjct: 392 FTTEEALRHPWLQDEDMKR 410
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 44 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKY 101
T K YQ+ V + H +GI+HRDLKP N+L+ + +KI D G ++ I
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGE 169
Query: 102 THEILTLW----YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
T + TL Y APEVL +G+ Y+ AVD WS+ I L + +P SE + +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQV 226
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
+ + + P V W E + + LDL++++L DP R
Sbjct: 227 SLKDQITSGKYNFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKAR 266
Query: 216 ISAKKAMEHPYFDDLDKTR 234
+ ++A+ HP+ D D R
Sbjct: 267 FTTEEALRHPWLQDEDMKR 285
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 44 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKY 101
T K YQ+ V + H +GI+HRDLKP N+L+ + +KI D G ++ I
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGE 169
Query: 102 THEILTLW----YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
T + TL Y APEVL +G+ Y+ AVD WS+ I L + +P SE + +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQV 226
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
+ + + P V W E + + LDL++++L DP R
Sbjct: 227 SLKDQITSGKYNFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKAR 266
Query: 216 ISAKKAMEHPYFDDLDKTR 234
+ ++A+ HP+ D D R
Sbjct: 267 FTTEEALRHPWLQDEDMKR 285
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 44 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKY 101
T K YQ+ V + H +GI+HRDLKP N+L+ + +KI D G ++ I
Sbjct: 121 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGE 175
Query: 102 THEILTLW----YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
T + TL Y APEVL +G+ Y+ AVD WS+ I L + +P SE + +
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQV 232
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
+ + + P V W E + + LDL++++L DP R
Sbjct: 233 SLKDQITSGKYNFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKAR 272
Query: 216 ISAKKAMEHPYFDDLDKTR 234
+ ++A+ HP+ D D R
Sbjct: 273 FTTEEALRHPWLQDEDMKR 291
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 44 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKY 101
T K YQ+ V + H +GI+HRDLKP N+L+ + +KI D G ++ I
Sbjct: 114 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGE 168
Query: 102 THEILTLW----YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
T + TL Y APEVL +G+ Y+ AVD WS+ I L + +P SE + +
Sbjct: 169 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQV 225
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
+ + + P V W E + + LDL++++L DP R
Sbjct: 226 SLKDQITSGKYNFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKAR 265
Query: 216 ISAKKAMEHPYFDDLDKTR 234
+ ++A+ HP+ D D R
Sbjct: 266 FTTEEALRHPWLQDEDMKR 284
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 92/199 (46%), Gaps = 36/199 (18%)
Query: 44 TVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKY 101
T K YQ+ V + H +GI+HRDLKP N+L+ + +KI D G ++ I
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK-----ILGE 169
Query: 102 THEILTLW----YRAPEVL--LGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
T + TL Y APEVL +G+ Y+ AVD WS+ I L + +P SE + +
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI---LFICLSGYPPFSEHRTQV 226
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
+ + + P V W E + + LDL++++L DP R
Sbjct: 227 SLKDQITSGKYNFIPEV-----WAE---------------VSEKALDLVKKLLVVDPKAR 266
Query: 216 ISAKKAMEHPYFDDLDKTR 234
+ ++A+ HP+ D D R
Sbjct: 267 FTTEEALRHPWLQDEDMKR 285
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P S EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------------PSDSX----QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 70 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 125
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 126 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 185 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 218
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 219 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 253
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.5 bits (171), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 94/215 (43%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYCSGG-ELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 72 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 127
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 128 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 187 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 220
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 221 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 27/184 (14%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD-RKTMTLKIADLGLARAFTLPIKKYTH 103
V + M Q C+G+ H H I+H D+KP N++ + +K ++KI D GLA P +
Sbjct: 151 VINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLN-PDEIVKV 209
Query: 104 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 163
T + APE+ + DMW++ + L++ + F G+ +L+ L ++ R
Sbjct: 210 TTATAEFAAPEI-VDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRC--- 265
Query: 164 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 223
+W +++ + ++ P + D ++ +LQ +P KR++ A+E
Sbjct: 266 -------------DW----EFDEDAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALE 304
Query: 224 HPYF 227
HP+
Sbjct: 305 HPWL 308
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 45/187 (24%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL-- 106
Q+ + VA+ H +GI+HRDLKP NLL LKIAD GL+ K H++L
Sbjct: 156 QILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS-------KIVEHQVLMK 208
Query: 107 ----TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 162
T Y APE+L G Y VDMWSV I L+ F + Q +FR
Sbjct: 209 TVCGTPGYCAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFR--- 261
Query: 163 TPNEKVWPGVSSLMNWHEY---PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 219
++N Y P W+ SL + DL+ +++ DP KR++
Sbjct: 262 -----------RILNCEYYFISPWWDEVSL---------NAKDLVRKLIVLDPKKRLTTF 301
Query: 220 KAMEHPY 226
+A++HP+
Sbjct: 302 QALQHPW 308
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 35/164 (21%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKK----- 100
L Q+ + +++ H GI+HRDLKP N+ +D ++ +KI D GLA+ +L I K
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 101 -------YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-------------- 139
T I T Y A EVL G+ HY+ +DM+S+ IF E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILK 239
Query: 140 ---TKTALFP---GDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
+ + FP D++++ I RLL + PG +L+N
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
G +EG + YL EY + + + R G +P + +QL GV + HG GI
Sbjct: 71 GHRREG-NIQYLFLEYC-SGGELFDRIEPDIG--MPEPDAQRFFHQLMAGVVYLHGIGIT 126
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYS 123
HRD+KP NLL+D + LKI+D GLA F ++ + TL Y APE+L ++
Sbjct: 127 HRDIKPENLLLDERD-NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 124 TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ 183
VD+WS + TA+ G+ Q P++ EY
Sbjct: 186 EPVDVWSCGIVL------TAMLAGELPWDQ----------PSDSC----------QEYSD 219
Query: 184 W-NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS 217
W ++ +D L LL ++L +PS RI+
Sbjct: 220 WKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 35/164 (21%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKK----- 100
L Q+ + +++ H GI+HRDLKP N+ +D ++ +KI D GLA+ +L I K
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 101 -------YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV-------------- 139
T I T Y A EVL G+ HY+ +DM+S+ IF E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILK 239
Query: 140 ---TKTALFP---GDSELQQLLHIFRLLGTPNEKVWPGVSSLMN 177
+ + FP D++++ I RLL + PG +L+N
Sbjct: 240 KLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E + +Y+V EY +++ + S + + PV QL G+ + H GI+H+D+
Sbjct: 78 EEKQKMYMVMEYCVCGMQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDI 135
Query: 70 KPHNLLMDRKTMTLKIADLGLARA---FTLPIKKYTHEILTLWYRAPEVLLGSTHYST-A 125
KP NLL+ TLKI+ LG+A A F T + + ++ PE+ G +S
Sbjct: 136 KPGNLLLTTGG-TLKISALGVAEALHPFAADDTCRTSQ-GSPAFQPPEIANGLDTFSGFK 193
Query: 126 VDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWN 185
VD+WS + T F GD +I++L E + G
Sbjct: 194 VDIWSAGVTLYNITTGLYPFEGD-------NIYKLF----ENIGKG-------------- 228
Query: 186 PQSLATAVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
+ A+P L DLL+ ML+Y+P+KR S ++ +H +F
Sbjct: 229 ----SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEI 105
+M + VA+CH + HRDLKP N L D LK+ D GLA F P K ++
Sbjct: 111 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKV 169
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T +Y +P+VL G Y D WS + L+ F ++ + +L I T
Sbjct: 170 GTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 227
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
EK W VS PQ+ + L+ ++L P +RI++ +A+EH
Sbjct: 228 EKDWLNVS------------PQAES------------LIRRLLTKSPKQRITSLQALEHE 263
Query: 226 YFD 228
+F+
Sbjct: 264 WFE 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEI 105
+M + VA+CH + HRDLKP N L D LK+ D GLA F P K ++
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK-PGKMMRTKV 186
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T +Y +P+VL G Y D WS + L+ F ++ + +L I T
Sbjct: 187 GTPYYVSPQVLEG--LYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFP 244
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
EK W VS PQ+ + L+ ++L P +RI++ +A+EH
Sbjct: 245 EKDWLNVS------------PQAES------------LIRRLLTKSPKQRITSLQALEHE 280
Query: 226 YFD 228
+F+
Sbjct: 281 WFE 283
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYL+ EY ++ Y+ + + E +S Q+ V +CH I+HRD
Sbjct: 81 ETEKTLYLIMEYASGGEVFDYLVAHGRMKEK----EARSKFRQIVSAVQYCHQKRIVHRD 136
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT+ K T + Y APE+ G + VD+
Sbjct: 137 LKAENLLLD-ADMNIKIADFGFSNEFTVGGKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 194
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 195 WSLGVILYTLVSGSLPFDGQN 215
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 27/181 (14%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 106
+ Q+ + V CH +GI+HRDLKP NLL+ K+ +K+AD GLA + +
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAG 168
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 166
T Y +PEVL Y VDMW+ I L+ F D + +L +
Sbjct: 169 TPGYLSPEVLRKDP-YGKPVDMWACGVILYILLVGYPPF-WDEDQHRLY----------Q 216
Query: 167 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
++ G + P+W+ T P + DL+ +ML +P+KRI+A +A++HP+
Sbjct: 217 QIKAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPAKRITASEALKHPW 263
Query: 227 F 227
Sbjct: 264 I 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 86/179 (48%), Gaps = 27/179 (15%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTL 108
Q+ + V CH +GI+HRDLKP NLL+ K+ +K+AD GLA + + T
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y +PEVL Y VDMW+ I L+ F D + +L +++
Sbjct: 171 GYLSPEVLRKDP-YGKPVDMWACGVILYILLVGYPPF-WDEDQHRLY----------QQI 218
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
G + P+W+ T P + DL+ +ML +P+KRI+A +A++HP+
Sbjct: 219 KAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 34/213 (15%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+ +V EY +L YI + E + Q+ V +CH H I+HRDLKP NL
Sbjct: 83 IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRHKIVHRDLKPENL 138
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+D + + +KIAD GL+ T + Y APEV+ G + VD+WS I
Sbjct: 139 LLD-EHLNVKIADFGLSNIMT-DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVI 196
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
++ + P D E +L + + GV +L P+ L+
Sbjct: 197 LYVMLCRR--LPFDDESIPVLF---------KNISNGVYTL----------PKFLSPGAA 235
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
L+++ML +P RIS + M+ +F
Sbjct: 236 G-------LIKRMLIVNPLNRISIHEIMQDDWF 261
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+ +V EY +L YI + E + Q+ V +CH H I+HRDLKP NL
Sbjct: 88 IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRHKIVHRDLKPENL 143
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+D + + +KIAD GL+ T T + Y APEV+ G + VD+WS I
Sbjct: 144 LLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVI 201
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
++ + P D E +L + + GV +L P+ L+
Sbjct: 202 LYVMLCRR--LPFDDESIPVLF---------KNISNGVYTL----------PKFLSPGAA 240
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
L+++ML +P RIS + M+ +F
Sbjct: 241 G-------LIKRMLIVNPLNRISIHEIMQDDWF 266
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+ +V EY +L YI + E + Q+ V +CH H I+HRDLKP NL
Sbjct: 79 IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRHKIVHRDLKPENL 134
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+D + + +KIAD GL+ T T + Y APEV+ G + VD+WS I
Sbjct: 135 LLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVI 192
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
++ + P D E +L + + GV +L P+ L+
Sbjct: 193 LYVMLCRR--LPFDDESIPVLF---------KNISNGVYTL----------PKFLSPGAA 231
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
L+++ML +P RIS + M+ +F
Sbjct: 232 G-------LIKRMLIVNPLNRISIHEIMQDDWF 257
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+ +V EY +L YI + E + Q+ V +CH H I+HRDLKP NL
Sbjct: 89 IIMVIEYAGNELFDYIVQRDKMSEQ----EARRFFQQIISAVEYCHRHKIVHRDLKPENL 144
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+D + + +KIAD GL+ T T + Y APEV+ G + VD+WS I
Sbjct: 145 LLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVI 202
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
++ + P D E +L + + GV +L P+ L+
Sbjct: 203 LYVMLCRR--LPFDDESIPVLF---------KNISNGVYTL----------PKFLSPGAA 241
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
L+++ML +P RIS + M+ +F
Sbjct: 242 G-------LIKRMLIVNPLNRISIHEIMQDDWF 267
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + + E ++ Q+ V +CH I+HRD
Sbjct: 84 ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQYCHQKYIVHRD 139
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT+ K T + Y APE+ G + VD+
Sbjct: 140 LKAENLLLD-GDMNIKIADFGFSNEFTVGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 197
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 198 WSLGVILYTLVSGSLPFDGQN 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + + E ++ Q+ V +CH I+HRD
Sbjct: 83 ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQYCHQKFIVHRD 138
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT K T + Y APE+ G + VD+
Sbjct: 139 LKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 197 WSLGVILYTLVSGSLPFDGQN 217
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + + E ++ Q+ V +CH I+HRD
Sbjct: 83 ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQYCHQKFIVHRD 138
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT K + Y APE+ G + VD+
Sbjct: 139 LKAENLLLD-ADMNIKIADFGFSNEFTFG-NKLDEFCGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 197 WSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + + E ++ Q+ V +CH I+HRD
Sbjct: 83 ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQYCHQKFIVHRD 138
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT K T + Y APE+ G + VD+
Sbjct: 139 LKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 197 WSLGVILYTLVSGSLPFDGQN 217
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + + E ++ Q+ V +CH I+HRD
Sbjct: 83 ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQYCHQKFIVHRD 138
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT K T + Y APE+ G + VD+
Sbjct: 139 LKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 197 WSLGVILYTLVSGSLPFDGQN 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 112/224 (50%), Gaps = 22/224 (9%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGEN----IPVNTVKSLMYQLCKGVAFCHGH-GILHRD 68
+Y+++EYM+ D + K+ F +N IP+ +K ++ + ++ H I HRD
Sbjct: 118 VYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRD 177
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTA-VD 127
+KP N+LMD K +K++D G + + KK T + PE + Y+ A VD
Sbjct: 178 VKPSNILMD-KNGRVKLSDFGESEY--MVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 128 MWSVA-CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
+WS+ C++ + P ++ L+ +F + T N + +P N YP N
Sbjct: 235 IWSLGICLYVMFYN---VVPFSLKI-SLVELFNNIRTKNIE-YPLDR---NHFLYPLTNK 286
Query: 187 QSLATAVPN-LDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
+S T N L + +D L+ L+ +P++RI+++ A++H + D
Sbjct: 287 KS--TCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 16 YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
Y+V EY+D + I G P ++ ++ C+ + F H +GI+HRD+KP N+L
Sbjct: 92 YIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIL 148
Query: 76 MDRKTMTLKIADLGLARAFT---LPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
+ T +K+ D G+ARA + + I T Y +PE G + D++S+
Sbjct: 149 IS-ATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLG 206
Query: 133 CIFAELVTKTALFPGDSELQ 152
C+ E++T F GDS +
Sbjct: 207 CVLYEVLTGEPPFTGDSPVS 226
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T + +V EY +L YI ++ E+ + Q+ + +CH H I+HRDLKP
Sbjct: 82 TDIVMVIEYAGGELFDYIVEKKRMTED----EGRRFFQQIICAIEYCHRHKIVHRDLKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+D + +KIAD GL+ T T + Y APEV+ G + VD+WS
Sbjct: 138 NLLLD-DNLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVINGKLYAGPEVDVWS-- 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
C V P D E PN ++ V+S + + P +
Sbjct: 194 CGIVLYVMLVGRLPFDDEF-----------IPN--LFKKVNSCV--YVMPDF-------- 230
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
L L+ +M+ DP +RI+ ++ P+F+
Sbjct: 231 ---LSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYL+ EY ++ Y+ + + E +S Q+ V +CH I+HRD
Sbjct: 84 ETEKTLYLIMEYASGGEVFDYLVAHGRMKEK----EARSKFRQIVSAVQYCHQKRIVHRD 139
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT+ K Y APE+ G + VD+
Sbjct: 140 LKAENLLLD-ADMNIKIADFGFSNEFTVG-GKLDAFCGAPPYAAPELFQGKKYDGPEVDV 197
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 198 WSLGVILYTLVSGSLPFDGQN 218
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + + E ++ Q+ V +CH I+HRD
Sbjct: 83 ETEKTLYLVMEYASGGEVFDYLVAHGRMKEK----EARAKFRQIVSAVQYCHQKFIVHRD 138
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT K Y APE+ G + VD+
Sbjct: 139 LKAENLLLD-ADMNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 197 WSLGVILYTLVSGSLPFDGQN 217
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 30/200 (15%)
Query: 35 QTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDR--KTMTLKIADLGLAR 92
+ E + N V L+ Q+ +GV + H + I+H DLKP N+L+ +KI D G++R
Sbjct: 123 ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
Query: 93 AFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
+ EI+ T Y APE+ L +TA DMW++ I L+T T+ F G+
Sbjct: 183 KIGHACE--LREIMGTPEYLAPEI-LNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ 239
Query: 152 QQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYD 211
+ L+I ++ +E+ + VS L D ++ +L +
Sbjct: 240 ETYLNISQVNVDYSEETFSSVSQL------------------------ATDFIQSLLVKN 275
Query: 212 PSKRISAKKAMEHPYFDDLD 231
P KR +A+ + H + D
Sbjct: 276 PEKRPTAEICLSHSWLQQWD 295
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 16 YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
Y+V EY+D + I G P ++ ++ C+ + F H +GI+HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 76 MDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
+ T +K+ D G+ARA T I T Y +PE G + D++S+
Sbjct: 149 IS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLG 206
Query: 133 CIFAELVTKTALFPGDSELQ 152
C+ E++T F GDS +
Sbjct: 207 CVLYEVLTGEPPFTGDSPVS 226
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 8/137 (5%)
Query: 16 YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
Y+V EY+D + I G P ++ ++ C+ + F H +GI+HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 76 MDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
+ T +K+ D G+ARA T I T Y +PE G + D++S+
Sbjct: 149 IS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLG 206
Query: 133 CIFAELVTKTALFPGDS 149
C+ E++T F GDS
Sbjct: 207 CVLYEVLTGEPPFTGDS 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILT 107
M Q+CKG+ H + +H DLKP N++ +++ LK+ D GL A P + T
Sbjct: 261 MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGT 319
Query: 108 LWYRAPEVLLGS-THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 166
+ APEV G Y T DMWSV + L++ + F G+++ + L ++
Sbjct: 320 AEFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC------ 371
Query: 167 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
WN +A + +DG D + ++L DP+ R++ +A+EHP+
Sbjct: 372 ----------------DWNMDD--SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413
Query: 227 F 227
Sbjct: 414 L 414
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 16 YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
Y+V EY+D + I G P ++ ++ C+ + F H +GI+HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 76 MDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
+ T +K+ D G+ARA T I T Y +PE G + D++S+
Sbjct: 149 IS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLG 206
Query: 133 CIFAELVTKTALFPGDSELQ 152
C+ E++T F GDS +
Sbjct: 207 CVLYEVLTGEPPFTGDSPVS 226
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 100/256 (39%), Gaps = 57/256 (22%)
Query: 32 SFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA 91
SF ++ V+ M L K + H GI+HRD+KP N L +R+ + D GLA
Sbjct: 106 SFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165
Query: 92 RA---FTLPIKKYTH-------------------------EILTLWYRAPEVLLGSTHYS 123
+ + + K+ T +RAPEVL + +
Sbjct: 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQT 225
Query: 124 TAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS---SLMNWH 179
TA+DMWS IF L++ + + +L L I + G+ E + + S++
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGS-RETIQAAKTFGKSILCSK 284
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQY------------------------DPSKR 215
E P + + L + +D L + + +P+ R
Sbjct: 285 EVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASR 344
Query: 216 ISAKKAMEHPYFDDLD 231
I+A++A+ HP+F D+
Sbjct: 345 ITAEEALLHPFFKDMS 360
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 16 YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
Y+V EY+D + I G P ++ ++ C+ + F H +GI+HRD+KP N++
Sbjct: 92 YIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIM 148
Query: 76 MDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
+ T +K+ D G+ARA T I T Y +PE G + D++S+
Sbjct: 149 IS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLG 206
Query: 133 CIFAELVTKTALFPGDSELQ 152
C+ E++T F GDS +
Sbjct: 207 CVLYEVLTGEPPFTGDSPVS 226
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 27/183 (14%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + + +A+ H G++HRD+K ++L+ +K++D G + + K
Sbjct: 143 IATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDG-RVKLSDFGFCAQISKDVPKRKXL 201
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ + Y+T VD+WS+ + E+V + DS +Q + RL +P
Sbjct: 202 VGTPYWMAPEVI-SRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK---RLRDSP 257
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
K L N H+ P L D LE+ML DP +R +A++ ++H
Sbjct: 258 PPK-------LKNSHKVS-----------PVLR----DFLERMLVRDPQERATAQELLDH 295
Query: 225 PYF 227
P+
Sbjct: 296 PFL 298
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + L LV M+ DLK +I Q G P ++C G+ H I++RD
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LKP N+L+D ++I+DLGLA + + T+ Y APEV + + Y+ + D
Sbjct: 312 LKPENILLDDHGH-IRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEV-VKNERYTFSPDW 368
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ-WNPQ 187
W++ C+ E++ G S QQ R E+V V + EY + ++PQ
Sbjct: 369 WALGCLLYEMIA------GQSPFQQ-----RKKKIKREEVERLVKEVP--EEYSERFSPQ 415
Query: 188 SLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYFDDLDKTRL 235
+ + L Q+L DP++R+ SA++ EHP F L+ RL
Sbjct: 416 ARS------------LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 27/179 (15%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDR--KTMTLKIADLGLARAFTLPIKKYTHEILTL 108
Q+ + V CH G++HRDLKP NLL+ K +K+AD GLA + + T
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 188
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y +PEVL Y VD+W+ I L+ F D + +L +++
Sbjct: 189 GYLSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPF-WDEDQHRLY----------QQI 236
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
G + P+W+ T P + DL+ +ML +PSKRI+A +A++HP+
Sbjct: 237 KAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 13 TVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH-----GHGILH 66
T LY+V EY + DL I + + + V +M QL + CH GH +LH
Sbjct: 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLH 139
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
RDLKP N+ +D K +K+ D GLAR + T +Y +PE + Y+
Sbjct: 140 RDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQ-MNRMSYNEKS 197
Query: 127 DMWSVACIFAELVTKTALFP 146
D+WS+ C+ EL AL P
Sbjct: 198 DIWSLGCLLYELC---ALMP 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 29/181 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLM-DRKTMTLKIADLGLARAFTLPIKKYTHEILT 107
M Q+CKG+ H + +H DLKP N++ +++ LK+ D GL A P + T
Sbjct: 155 MRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGT 213
Query: 108 LWYRAPEVLLGS-THYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 166
+ APEV G Y T DMWSV + L++ + F G+++ + L ++
Sbjct: 214 AEFAAPEVAEGKPVGYYT--DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC------ 265
Query: 167 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
WN +A + +DG D + ++L DP+ R++ +A+EHP+
Sbjct: 266 ----------------DWNMDD--SAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 307
Query: 227 F 227
Sbjct: 308 L 308
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + L LV M+ DLK +I Q G P ++C G+ H I++RD
Sbjct: 254 ETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLHRERIVYRD 311
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LKP N+L+D ++I+DLGLA + + T+ Y APEV + + Y+ + D
Sbjct: 312 LKPENILLDDHGH-IRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEV-VKNERYTFSPDW 368
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQ-WNPQ 187
W++ C+ E++ G S QQ R E+V V + EY + ++PQ
Sbjct: 369 WALGCLLYEMIA------GQSPFQQ-----RKKKIKREEVERLVKEVP--EEYSERFSPQ 415
Query: 188 SLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYFDDLDKTRL 235
+ + L Q+L DP++R+ SA++ EHP F L+ RL
Sbjct: 416 ARS------------LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 13 TVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH-----GHGILH 66
T LY+V EY + DL I + + + V +M QL + CH GH +LH
Sbjct: 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLH 139
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
RDLKP N+ +D K +K+ D GLAR + T +Y +PE + Y+
Sbjct: 140 RDLKPANVFLDGK-QNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQ-MNRMSYNEKS 197
Query: 127 DMWSVACIFAELVTKTALFP 146
D+WS+ C+ EL AL P
Sbjct: 198 DIWSLGCLLYELC---ALMP 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 8/140 (5%)
Query: 16 YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
Y+V EY+D + I G P ++ ++ C+ + F H +GI+HRD+KP N++
Sbjct: 109 YIVMEYVDGVTLRDI--VHTEGPMTPKRAIE-VIADACQALNFSHQNGIIHRDVKPANIM 165
Query: 76 MDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
+ T +K+ D G+ARA T I T Y +PE G + D++S+
Sbjct: 166 IS-ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLG 223
Query: 133 CIFAELVTKTALFPGDSELQ 152
C+ E++T F GDS +
Sbjct: 224 CVLYEVLTGEPPFTGDSPVS 243
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 40/236 (16%)
Query: 8 NKEGRTVLYLVFEYMDTDLKKYI--RSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGIL 65
++ R Y+ E L++Y+ + F G P+ +L+ Q G+A H I+
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PI----TLLQQTTSGLAHLHSLNIV 140
Query: 66 HRDLKPHNLLMDRKTMTLKI----ADLGLARAFTLPIKKYTHEIL---TLWYRAPEVLLG 118
HRDLKPHN+L+ KI +D GL + + ++ T + APE+L
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE 200
Query: 119 ST--HYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
+ + VD++S C+F ++++ + P LQ+ +I G SL
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGS-HPFGKSLQRQANILL-----------GACSLD 248
Query: 177 NWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDK 232
H P+ + +A +L+E+M+ DP KR SAK ++HP+F L+K
Sbjct: 249 CLH--PEKHEDVIAR----------ELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 13 TVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCH-----GHGILH 66
T LY+V EY + DL I + + + V +M QL + CH GH +LH
Sbjct: 80 TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLH 139
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
RDLKP N+ +D K +K+ D GLAR + T +Y +PE + Y+
Sbjct: 140 RDLKPANVFLDGK-QNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQ-MNRMSYNEKS 197
Query: 127 DMWSVACIFAELVTKTALFP 146
D+WS+ C+ EL AL P
Sbjct: 198 DIWSLGCLLYELC---ALMP 214
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 96/215 (44%), Gaps = 35/215 (16%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + E ++ Q+ V +CH I+HRD
Sbjct: 76 ETEKTLYLVMEYASGGEVFDYLVAHGWMKEK----EARAKFRQIVSAVQYCHQKFIVHRD 131
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D M +KIAD G + FT K T + Y APE+ G + VD+
Sbjct: 132 LKAENLLLD-ADMNIKIADFGFSNEFTFGNKLDTF-CGSPPYAAPELFQGKKYDGPEVDV 189
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS+ I LV+ + F G + L++L E+V G + P
Sbjct: 190 WSLGVILYTLVSGSLPFDGQN-LKEL----------RERVLRGKYRI----------PFY 228
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 223
++T N LL++ L +PSKR + ++ M+
Sbjct: 229 MSTDCEN-------LLKKFLILNPSKRGTLEQIMK 256
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--VKSLMYQLCKGVAFCHGHGILHR 67
E T +LVF DL K F E + ++ + +M L + + H I+HR
Sbjct: 81 ETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHR 135
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH-----Y 122
DLKP N+L+D M +K+ D G + P +K T Y APE++ S + Y
Sbjct: 136 DLKPENILLD-DDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGY 193
Query: 123 STAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
VDMWS I L+ + F +Q+L + R++ + N + P
Sbjct: 194 GKEVDMWSTGVIMYTLLAGSPPF---WHRKQML-MLRMIMSGNYQFGS-----------P 238
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+W+ S DL+ + L P KR +A++A+ HP+F
Sbjct: 239 EWDDYSDTVK---------DLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 84 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 142
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTEPCYTPYYVAPEV-LGPEKYDKSCDM 200
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 201 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 245
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 246 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--VKSLMYQLCKGVAFCHGHGILHR 67
E T +LVF DL K F E + ++ + +M L + + H I+HR
Sbjct: 94 ETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHR 148
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH-----Y 122
DLKP N+L+D M +K+ D G + P +K T Y APE++ S + Y
Sbjct: 149 DLKPENILLD-DDMNIKLTDFGFSCQLD-PGEKLREVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 123 STAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
VDMWS I L+ + F +Q+L + R++ + N + P
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPF---WHRKQML-MLRMIMSGNYQFGS-----------P 251
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+W+ S DL+ + L P KR +A++A+ HP+F
Sbjct: 252 EWDDYSDTVK---------DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 29/183 (15%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNL--LMDRKTMTLKIADLGLARAFTLPIKKYTHEI 105
++ Q+ V + H +GI+HRDLKP NL L + + I D GL++ I +
Sbjct: 111 VIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTAC 168
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T Y APEV L YS AVD WS+ I L+ F ++E +
Sbjct: 169 GTPGYVAPEV-LAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF----------- 216
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
EK+ G E P W+ ++ + D + +L+ DP++R + +KA+ HP
Sbjct: 217 EKIKEGYYEF----ESPFWD---------DISESAKDFICHLLEKDPNERYTCEKALSHP 263
Query: 226 YFD 228
+ D
Sbjct: 264 WID 266
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEILTL 108
Q+ + V CH G++HRDLKP NLL+ K +K+AD GLA + + T
Sbjct: 111 QILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP 170
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y +PEVL Y VD+W+ I L+ F + + K+
Sbjct: 171 GYLSPEVLRKEA-YGKPVDIWACGVILYILLVGYPPFWDEDQ---------------HKL 214
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
+ + + P+W+ T P + +L+ QML +P+KRI+A +A++HP+
Sbjct: 215 YQQIKAGAYDFPSPEWD-----TVTP----EAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Query: 16 YLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
YLV EY++ L +YI S + V+T + Q+ G+ H I+HRD+KP N+
Sbjct: 87 YLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNI 142
Query: 75 LMDRKTMTLKIADLGLARAFT-LPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
L+D TLKI D G+A+A + + + H + T+ Y +PE G D++S+
Sbjct: 143 LIDSNK-TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA-TDECTDIYSIGI 200
Query: 134 IFAELVTKTALFPGDS 149
+ E++ F G++
Sbjct: 201 VLYEMLVGEPPFNGET 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 98/225 (43%), Gaps = 38/225 (16%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT--VKSLMYQLCKGVAFCHGHGILHR 67
E T +LVF DL K F E + ++ + +M L + + H I+HR
Sbjct: 94 ETNTFFFLVF-----DLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHR 148
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH-----Y 122
DLKP N+L+D M +K+ D G + P +K T Y APE++ S + Y
Sbjct: 149 DLKPENILLD-DDMNIKLTDFGFSCQLD-PGEKLRSVCGTPSYLAPEIIECSMNDNHPGY 206
Query: 123 STAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
VDMWS I L+ + F +Q+L + R++ + N + P
Sbjct: 207 GKEVDMWSTGVIMYTLLAGSPPF---WHRKQML-MLRMIMSGNYQFGS-----------P 251
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+W+ S DL+ + L P KR +A++A+ HP+F
Sbjct: 252 EWDDYSDTVK---------DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 136 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 194
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 252
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 253 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 297
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 298 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 130 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 188
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 246
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 247 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 291
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 292 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 86 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 202
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 203 WSLGVIMYILLCGYPPFYSNHGLA---------------ISPGMKTRIRMGQYEFPNPEW 247
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 248 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 90 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 148
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 206
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 207 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 251
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 252 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 91 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 149
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 207
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 208 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 252
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 253 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 92 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 150
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 208
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 209 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 253
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 254 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 84 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 142
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 200
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 201 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 245
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 246 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 100 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 158
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 216
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 217 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 261
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 262 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 86 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 202
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 203 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 247
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 248 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 33/223 (14%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 85 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 143
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + DM
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDM 201
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 202 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 246
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 247 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 34/185 (18%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPIKKYT 102
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPGSVLS 176
Query: 103 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 162
T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 177 TACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY 235
Query: 163 TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 222
+ W +S D + +++ DP KR + ++A+
Sbjct: 236 EFDSPYWDDISD------------------------SAKDFIRHLMEKDPEKRFTCEQAL 271
Query: 223 EHPYF 227
+HP+
Sbjct: 272 QHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 34/185 (18%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPIKKYT 102
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPGSVLS 176
Query: 103 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 162
T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 177 TACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY 235
Query: 163 TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 222
+ W +S D + +++ DP KR + ++A+
Sbjct: 236 EFDSPYWDDISDSAK------------------------DFIRHLMEKDPEKRFTCEQAL 271
Query: 223 EHPYF 227
+HP+
Sbjct: 272 QHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 34/185 (18%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPIKKYT 102
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPGSVLS 176
Query: 103 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 162
T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 177 TACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY 235
Query: 163 TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 222
+ W +S D + +++ DP KR + ++A+
Sbjct: 236 EFDSPYWDDISDSAK------------------------DFIRHLMEKDPEKRFTCEQAL 271
Query: 223 EHPYF 227
+HP+
Sbjct: 272 QHPWI 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 34/185 (18%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLM-----DRKTMTLKIADLGLARAFTLPIKKYT 102
L++Q+ V + H GI+HRDLKP NLL D K M I+D GL++ P +
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIM---ISDFGLSK-MEDPGSVLS 176
Query: 103 HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 162
T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 177 TACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEY 235
Query: 163 TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAM 222
+ W +S D + +++ DP KR + ++A+
Sbjct: 236 EFDSPYWDDISDSAK------------------------DFIRHLMEKDPEKRFTCEQAL 271
Query: 223 EHPYF 227
+HP+
Sbjct: 272 QHPWI 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 27/180 (15%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDR--KTMTLKIADLGLARAFTLPIKKYTHEILTL 108
Q+ + V CH G++HR+LKP NLL+ K +K+AD GLA + + T
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y +PEVL Y VD+W+ I L+ F D + +L +++
Sbjct: 178 GYLSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPF-WDEDQHRLY----------QQI 225
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
G + P+W+ T P + DL+ +ML +PSKRI+A +A++HP+
Sbjct: 226 KAGAYDFPS----PEWD-----TVTP----EAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRTELCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E LYLV EY ++ Y+ + + E ++ Q+ V +CH I+HRD
Sbjct: 83 ETEKTLYLVXEYASGGEVFDYLVAHGRXKEK----EARAKFRQIVSAVQYCHQKFIVHRD 138
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
LK NLL+D +KIAD G + FT K Y APE+ G + VD+
Sbjct: 139 LKAENLLLD-ADXNIKIADFGFSNEFTFG-NKLDAFCGAPPYAAPELFQGKKYDGPEVDV 196
Query: 129 WSVACIFAELVTKTALFPGDS 149
WS+ I LV+ + F G +
Sbjct: 197 WSLGVILYTLVSGSLPFDGQN 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 94/226 (41%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 107 LYFGLSYAKNGCLLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE LL S + D+W++
Sbjct: 163 ILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKSASKSSDLWAL 220
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 262
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 163 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 262
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 107 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 163
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 164 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 219
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T +P +
Sbjct: 220 VLCYEFLVGKPPFEANTYQETYKRISRVEFT-----------------FPDF-------- 254
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ + DL+ ++L+++PS+R ++ +EHP+
Sbjct: 255 ---VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 161 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 218
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 260
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 163 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSS-DLWAL 220
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR------------------ 262
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 161 ILLN-EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSS-DLWAL 218
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 260
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 27/180 (15%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 106
++Q+ + V H H I+HRDLKP NLL+ K +K+AD GLA + +
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAG 195
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNE 166
T Y +PEVL Y VD+W+ I L+ F + +
Sbjct: 196 TPGYLSPEVLRKDP-YGKPVDIWACGVILYILLVGYPPFWDEDQ---------------H 239
Query: 167 KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
K++ + + P+W+ T P + +L+ QML +P+KRI+A +A++HP+
Sbjct: 240 KLYQQIKAGAYDFPSPEWD-----TVTP----EAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 163 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 262
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 161 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 218
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 260
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 108 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 164 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 221
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 263
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 264 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 298
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 105 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 161 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 218
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 219 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 260
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 261 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 295
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 85 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 140
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ T Y +PE+L + ++ D+W++
Sbjct: 141 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 198
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 199 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 240
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 241 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 275
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 30/192 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD-RKTMTLKIADLGLARAF-TLPIKKY- 101
+ ++M Q+ + + H GI HRD+KP N L K+ +K+ D GL++ F L +Y
Sbjct: 170 ISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 102 --THEILTLWYRAPEVLLGSTH-YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIF 158
T + T ++ APEVL + Y D WS + L+ FPG ++ + +
Sbjct: 230 GMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL 289
Query: 159 RLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISA 218
N+K+ E P +N L DLL +L + +R A
Sbjct: 290 ------NKKL---------CFENPNYNV---------LSPLARDLLSNLLNRNVDERFDA 325
Query: 219 KKAMEHPYFDDL 230
+A++HP+
Sbjct: 326 MRALQHPWISQF 337
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 108 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 164 ILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS-DLWAL 221
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 222 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 263
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 264 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 298
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 112 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 167
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 168 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 225
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 226 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 267
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 268 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 302
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 163 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 221 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 262
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 84 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 139
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 140 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 197
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 198 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 239
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 240 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 274
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 98 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 154
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 155 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 210
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 211 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 241
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 242 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 39/217 (17%)
Query: 13 TVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
T +YL+ EY ++ K ++ + E + + +L +++CH ++HRD+KP
Sbjct: 86 TRVYLILEYAPRGEVYKELQKLSKFDEQ----RTATYITELANALSYCHSKRVIHRDIKP 141
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 142 ENLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSL 197
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
+ E + F ++ + I R+ T
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------------------------- 229
Query: 192 AVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 -FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 35/188 (18%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD-RKTMTLKIADLGLARAFTLPIKKYTH 103
+ S ++Q+C+ + F H H I H D++P N++ R++ T+KI + G AR P +
Sbjct: 104 IVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK-PGDNF-- 160
Query: 104 EILTLWYRAPEVLLGSTH----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
L + APE H STA DMWS+ + L++ F ++ Q + +I
Sbjct: 161 ---RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMN 217
Query: 160 LLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 219
T +E+ + +S + +D ++++L + R++A
Sbjct: 218 AEYTFDEEAFKEISI------------------------EAMDFVDRLLVKERKSRMTAS 253
Query: 220 KAMEHPYF 227
+A++HP+
Sbjct: 254 EALQHPWL 261
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 83 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 138
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ T Y +PE+L + ++ D+W++
Sbjct: 139 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 196
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 197 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 238
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 239 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 273
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 82 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 137
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ T Y +PE+L + ++ D+W++
Sbjct: 138 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 195
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 196 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 237
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 238 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 272
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 89 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ T Y +PE+L + ++ D+W++
Sbjct: 145 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 202
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 203 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 244
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 245 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 279
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 107 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 163 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 220
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 221 GCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFPKAR------------------ 262
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 263 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 297
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 104 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ T Y +PE+L + ++ D+W++
Sbjct: 160 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 217
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 259
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 260 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 294
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 82 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 138
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 139 NLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 194
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 195 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 225
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 86 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 142
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE + G H VD+WS+
Sbjct: 143 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEXIEGRXH-DEKVDLWSLG 198
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 199 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 229
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 97/226 (42%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 104 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIK--KYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K + + T Y +PE+L + ++ D+W++
Sbjct: 160 ILLN-EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS-DLWAL 217
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L EK +P
Sbjct: 218 GCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKAR------------------ 259
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 260 ----------DLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 294
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 86 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 142
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 143 NLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 198
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 199 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 229
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 34/181 (18%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 106
+ M +L + +CH ++HRD+KP NLLM K LKIAD G + P +
Sbjct: 119 TFMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGW--SVHAPSLRRRXMCG 175
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPN 165
TL Y PE++ G TH VD+W + E + F S + I + L P
Sbjct: 176 TLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP- 233
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
P L DL+ ++L+Y P +R+ K MEHP
Sbjct: 234 ----------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 265
Query: 226 Y 226
+
Sbjct: 266 W 266
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRTXLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 84 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 140
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 141 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 196
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 227
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRTDLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKK----- 100
L Q+ + +++ H GI+HR+LKP N+ +D ++ +KI D GLA+ +L I K
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFID-ESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 101 -------YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELV 139
T I T Y A EVL G+ HY+ +D +S+ IF E +
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 86 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 142
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 143 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 198
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 199 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 229
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 34/181 (18%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 106
+ M +L + +CH ++HRD+KP NLLM K LKIAD G + P +
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGW--SVHAPSLRRRXMCG 174
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPN 165
TL Y PE++ G TH VD+W + E + F S + I + L P
Sbjct: 175 TLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP- 232
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
P L DL+ ++L+Y P +R+ K MEHP
Sbjct: 233 ----------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 226 Y 226
+
Sbjct: 265 W 265
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 34/181 (18%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL 106
+ M +L + +CH ++HRD+KP NLLM K LKIAD G + P +
Sbjct: 118 TFMEELADALHYCHERKVIHRDIKPENLLMGYKG-ELKIADFGW--SVHAPSLRRRXMCG 174
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGTPN 165
TL Y PE++ G TH VD+W + E + F S + I + L P
Sbjct: 175 TLDYLPPEMIEGKTH-DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP- 232
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
P L DL+ ++L+Y P +R+ K MEHP
Sbjct: 233 ----------------------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHP 264
Query: 226 Y 226
+
Sbjct: 265 W 265
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHE 104
+++ + K V + H G++HRDLKP N+L ++ L+I D G A+
Sbjct: 126 VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACI-FAELVTKTALFPGDSELQQLLHIFRLLGT 163
T + APEVL Y D+WS+ + + L T G S+ T
Sbjct: 186 CYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD------------T 232
Query: 164 PNE---KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 220
P E ++ G +L + WN + + DL+ +ML DP +R++AK+
Sbjct: 233 PEEILTRIGSGKFTLSGGN----WN---------TVSETAKDLVSKMLHVDPHQRLTAKQ 279
Query: 221 AMEHPYFDDLDK 232
++HP+ DK
Sbjct: 280 VLQHPWVTQKDK 291
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 84 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 140
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 141 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 196
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 227
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 80 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 136
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 137 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 192
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 193 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 223
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 224 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 85 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 141
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 142 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 197
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 198 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 228
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 229 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 33/192 (17%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHE 104
+++ + K V + H G++HRDLKP N+L ++ L+I D G A+
Sbjct: 126 VLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP 185
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACI-FAELVTKTALFPGDSELQQLLHIFRLLGT 163
T + APEVL Y D+WS+ + + L T G S+ T
Sbjct: 186 CYTANFVAPEVL-KRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSD------------T 232
Query: 164 PNE---KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 220
P E ++ G +L + WN + + DL+ +ML DP +R++AK+
Sbjct: 233 PEEILTRIGSGKFTLSGGN----WN---------TVSETAKDLVSKMLHVDPHQRLTAKQ 279
Query: 221 AMEHPYFDDLDK 232
++HP+ DK
Sbjct: 280 VLQHPWVTQKDK 291
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 78 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 134
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 135 NLLLG-SAGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 190
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 191 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 221
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 222 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 30/187 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 106
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 134 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 191
Query: 107 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 192 GTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ--------------- 235
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++ P
Sbjct: 236 HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALKVP 286
Query: 226 YFDDLDK 232
+ + ++
Sbjct: 287 WICNRER 293
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 82 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 138
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 139 NLLLG-SAGELKIADFGW--SCHAPSSRRTTLSGTLDYLPPEMIEGRMH-DEKVDLWSLG 194
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 195 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 225
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 31/187 (16%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT---MTLKIADLGLARAFTLPIKKYTH 103
++++ + K V + H G++HRDLKP N+L ++ +++I D G A+
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT 179
Query: 104 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 163
T + APEV L Y A D+WS+ + ++T F + T
Sbjct: 180 PCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----------DT 227
Query: 164 PNE---KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 220
P E ++ G SL + WN ++ DL+ +ML DP +R++A
Sbjct: 228 PEEILARIGSGKFSLSGGY----WN---------SVSDTAKDLVSKMLHVDPHQRLTAAL 274
Query: 221 AMEHPYF 227
+ HP+
Sbjct: 275 VLRHPWI 281
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 30/188 (15%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 106
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 110 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 167
Query: 107 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 168 GTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ--------------- 211
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++ P
Sbjct: 212 HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALKVP 262
Query: 226 YFDDLDKT 233
+ + ++
Sbjct: 263 WICNRERV 270
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 30/188 (15%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 106
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 168
Query: 107 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 169 GTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ--------------- 212
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++ P
Sbjct: 213 HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALKVP 263
Query: 226 YFDDLDKT 233
+ + ++
Sbjct: 264 WICNRERV 271
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 107 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 163
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 164 NLLLG-SAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 219
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 220 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 250
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 30/182 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT--MTLKIADLGLARAFTLPIKKYTHEIL 106
+ Q+ + +A+CH +GI+HR+LKP NLL+ K +K+AD GL A + + H
Sbjct: 111 IQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGL--AIEVNDSEAWHGFA 168
Query: 107 -TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
T Y +PEVL YS VD+W+ I L+ F + +
Sbjct: 169 GTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQ--------------- 212
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
+++ + + + P+W+ T P + L++ ML +P KRI+A +A++ P
Sbjct: 213 HRLYAQIKAGAYDYPSPEWD-----TVTP----EAKSLIDSMLTVNPKKRITADQALKVP 263
Query: 226 YF 227
+
Sbjct: 264 WI 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 39/217 (17%)
Query: 13 TVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
T +YL+ EY ++ K ++ + E + + +L +++CH ++HRD+KP
Sbjct: 86 TRVYLILEYAPRGEVYKELQKLSKFDEQ----RTATYITELANALSYCHSKRVIHRDIKP 141
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 142 ENLLLG-SAGELKIADFGW--SVHAPSSRRXXLXGTLDYLPPEMIEGRMH-DEKVDLWSL 197
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
+ E + F ++ + I R+ T
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------------------------- 229
Query: 192 AVPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 230 -FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 91/293 (31%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHG-ILHRDLKP 71
T + +VFE + L K+I + + +P+ VK ++ Q+ +G+ + H I+H D+KP
Sbjct: 118 THICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP 175
Query: 72 HNLLM------------------------------------------------DRKTMTL 83
N+L+ + + + +
Sbjct: 176 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 235
Query: 84 KIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTA 143
KIADLG A K +T +I T YR+ EVL+GS Y+T D+WS AC+ EL T
Sbjct: 236 KIADLGNACWVH---KHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDY 291
Query: 144 LFPGDS------ELQQLLHIFRLLG-TPNEKVWPG---------------VSSLMNWH-- 179
LF S + + I LLG P + + G ++ L W
Sbjct: 292 LFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 351
Query: 180 ----EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
E +W+ + A D L ML+ P KR +A + + HP+ +
Sbjct: 352 EVLVEKYEWSQEEAAGFT--------DFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 91/293 (31%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHG-ILHRDLKP 71
T + +VFE + L K+I + + +P+ VK ++ Q+ +G+ + H I+H D+KP
Sbjct: 102 THICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP 159
Query: 72 HNLLM------------------------------------------------DRKTMTL 83
N+L+ + + + +
Sbjct: 160 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 219
Query: 84 KIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTA 143
KIADLG A K +T +I T YR+ EVL+GS Y+T D+WS AC+ EL T
Sbjct: 220 KIADLGNA---CWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDY 275
Query: 144 LFPGDS------ELQQLLHIFRLLG-TPNEKVWPG---------------VSSLMNWH-- 179
LF S + + I LLG P + + G ++ L W
Sbjct: 276 LFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLF 335
Query: 180 ----EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFD 228
E +W+ + A D L ML+ P KR +A + + HP+ +
Sbjct: 336 EVLVEKYEWSQEEAAGFT--------DFLLPMLELIPEKRATAAECLRHPWLN 380
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 83 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 139
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 140 NLLLG-SAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 195
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 196 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 226
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 84 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 140
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 141 NLLLG-SAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRMH-DEKVDLWSLG 196
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 227
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 45/226 (19%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY Y + +L KYIR E + ++ + + HG GI+HRDLKP N
Sbjct: 110 LYFGLSYAKNGELLKYIRKIGSFDET----CTRFYTAEIVSALEYLHGKGIIHRDLKPEN 165
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+L++ + M ++I D G A+ + K+ + T Y +PE+L + ++ D+W++
Sbjct: 166 ILLN-EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSS-DLWAL 223
Query: 132 ACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLAT 191
CI +LV F +E I +L +++P A
Sbjct: 224 GCIIYQLVAGLPPFRAGNEYLIFQKIIKL-----------------EYDFP-------AA 259
Query: 192 AVPNLDKDGLDLLEQMLQYDPSKRISAKKAME-------HPYFDDL 230
P DL+E++L D +KR+ ++ ME HP+F+ +
Sbjct: 260 FFPK----ARDLVEKLLVLDATKRLGCEE-MEGYGPLKAHPFFESV 300
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 83 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 139
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIA+ G + P + T TL Y PE++ G H VD+WS+
Sbjct: 140 NLLLG-SAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 195
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 196 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 226
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 84 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 140
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIA+ G + P + T TL Y PE++ G H VD+WS+
Sbjct: 141 NLLLG-SAGELKIANFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 196
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 227
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 84 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 140
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 141 NLLLG-SAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 196
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 227
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRXXLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 73/171 (42%), Gaps = 20/171 (11%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEI 105
+M +L V+ H G++HRDLKP NLL + + +KI D G AR +
Sbjct: 111 IMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPN 165
TL Y APE LL Y + D+WS+ I +++ F H L T
Sbjct: 171 FTLHYAAPE-LLNQNGYDESCDLWSLGVILYTMLSGQVPFQS--------HDRSLTCTSA 221
Query: 166 EKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRI 216
++ + E W N+ ++ DL++ +L DP+KR+
Sbjct: 222 VEIMKKIKKGDFSFEGEAWK---------NVSQEAKDLIQGLLTVDPNKRL 263
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V +Y + DL K I + Q G + + Q+C + H ILHRD+K N
Sbjct: 98 LYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQN 155
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+ + K T+++ D G+AR ++ I T +Y +PE+ + Y+ D+W++ C
Sbjct: 156 IFLT-KDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI-CENKPYNNKSDIWALGC 213
Query: 134 IFAELVTKTALFPGDSELQQLLHIF 158
+ EL T F S +L I
Sbjct: 214 VLYELCTLKHAFEAGSMKNLVLKII 238
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 84 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 140
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 141 NLLLG-SAGELKIADFGW--SVHAPSSRRDDLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 196
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 197 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 227
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 37/216 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 82 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 138
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 139 NLLLG-SAGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 194
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ + I R+ T
Sbjct: 195 VLCYEFLVGKPPFEANTYQETYKRISRVEFT----------------------------- 225
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPYF 227
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ + T + + +L +++CH ++HRD+KP
Sbjct: 81 TRVYLILEY--APLGTVYRELQKLSKFDEQRTA-TYITELANALSYCHSKKVIHRDIKPE 137
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 138 NLLLG-SAGELKIADFGW--SVHAPSSRRAALCGTLDYLPPEMIEGRMH-DEKVDLWSLG 193
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F ++ I R+ T
Sbjct: 194 VLCYEFLVGKPPFEANTYQDTYKRISRVEFT----------------------------- 224
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++PS+R ++ +EHP+
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ T + + +L +++CH ++HRD+KP
Sbjct: 85 TRVYLILEY--APLGTVYRELQKLSRFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 141
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + T TL Y PE++ G H VD+WS+
Sbjct: 142 NLLLG-SNGELKIADFGW--SVHAPSSRRTTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 197
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F + + I R+ T
Sbjct: 198 VLCYEFLVGMPPFEAHTYQETYRRISRVEFT----------------------------- 228
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++ S+R++ + +EHP+
Sbjct: 229 FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
Query: 14 VLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
L++ E+ D L+++I R GE + L Q+ KGV + H ++HRDLKP
Sbjct: 108 CLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPS 165
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
N+ + T +KI D GL + K+ T TL Y +PE + S Y VD++++
Sbjct: 166 NIFL-VDTKQVKIGDFGLVTSLKNDGKR-TRSKGTLRYMSPE-QISSQDYGKEVDLYALG 222
Query: 133 CIFAELV 139
I AEL+
Sbjct: 223 LILAELL 229
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 27/147 (18%)
Query: 25 DLKKYIRSFRQTG------ENIPVNTVKSLMY------------------QLCKGVAFCH 60
++ +Y+ SF + G E +P ++ +L+ Q+ +G+ + H
Sbjct: 80 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 139
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVL-LG 118
+ I+HRD+K N+L++ + LKI+D G ++ I T TL Y APE++ G
Sbjct: 140 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKG 198
Query: 119 STHYSTAVDMWSVACIFAELVTKTALF 145
Y A D+WS+ C E+ T F
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL--PIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 27/147 (18%)
Query: 25 DLKKYIRSFRQTG------ENIPVNTVKSLMY------------------QLCKGVAFCH 60
++ +Y+ SF + G E +P ++ +L+ Q+ +G+ + H
Sbjct: 66 NIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH 125
Query: 61 GHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVL-LG 118
+ I+HRD+K N+L++ + LKI+D G ++ I T TL Y APE++ G
Sbjct: 126 DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKG 184
Query: 119 STHYSTAVDMWSVACIFAELVTKTALF 145
Y A D+WS+ C E+ T F
Sbjct: 185 PRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL--PIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH-GILHRDLKPHN 73
+++ E MDT L K+ + G+ IP + + + + K + H ++HRD+KP N
Sbjct: 125 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL---LGSTHYSTAVDMWS 130
+L++ +K+ D G++ + K T + Y APE + L YS D+WS
Sbjct: 185 VLIN-ALGQVKMCDFGISGYLVDSVAK-TIDAGCKPYMAPERINPELNQKGYSVKSDIWS 242
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
+ EL FP DS GTP ++ L E P +PQ A
Sbjct: 243 LGITMIELA--ILRFPYDS-----------WGTPFQQ-------LKQVVEEP--SPQLPA 280
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ +D Q L+ + +R + + M+HP+F
Sbjct: 281 D---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 31/187 (16%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKT---MTLKIADLGLARAFTLPIKKYTH 103
++++ + K V + H G++HRDLKP N+L ++ +++I D G A+
Sbjct: 120 AVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXT 179
Query: 104 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 163
T + APEV L Y A D+WS+ + +T F + T
Sbjct: 180 PCYTANFVAPEV-LERQGYDAACDIWSLGVLLYTXLTGYTPFANGPD-----------DT 227
Query: 164 PNE---KVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 220
P E ++ G SL + WN ++ DL+ + L DP +R++A
Sbjct: 228 PEEILARIGSGKFSLSGGY----WN---------SVSDTAKDLVSKXLHVDPHQRLTAAL 274
Query: 221 AMEHPYF 227
+ HP+
Sbjct: 275 VLRHPWI 281
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 92 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 149
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ T++ KIAD GLAR + +YT + + APE + T ++ D+WS
Sbjct: 150 ILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWS 205
Query: 131 VACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ E+VT + +PG + +Q L +R++ N
Sbjct: 206 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 244
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 87 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ T++ KIAD GLAR + +YT + + APE + T ++ D+WS
Sbjct: 145 ILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ E+VT + +PG + +Q L +R++ N
Sbjct: 201 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 239
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 94/182 (51%), Gaps = 18/182 (9%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 77 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 134
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ T++ KIAD GLAR + +YT + + APE + T ++ D+WS
Sbjct: 135 ILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWS 190
Query: 131 VACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN--EKVWPGVSSLMNWHEYPQW 184
+ E+VT + +PG + +Q L +R++ N E+++ + + W E P+
Sbjct: 191 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMR--LCWKERPED 248
Query: 185 NP 186
P
Sbjct: 249 RP 250
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 88 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ T++ KIAD GLAR + +YT + + APE + T ++ D+WS
Sbjct: 146 ILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWS 201
Query: 131 VACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ E+VT + +PG + +Q L +R++ N
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 49/237 (20%)
Query: 15 LYLVFEYM-DTDLKKYI---RSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
YLVFE M + +I R F + ++ V V S + F H GI HRDLK
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL-------DFLHNKGIAHRDLK 138
Query: 71 PHNLLMD--RKTMTLKIADLGLARAFTL-----PIKKYTHEILT----LWYRAPEVLLG- 118
P N+L + + +KI D GL L PI T E+LT Y APEV+
Sbjct: 139 PENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPIS--TPELLTPCGSAEYMAPEVVEAF 196
Query: 119 ---STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 175
++ Y D+WS+ I L++ F G G + P ++
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD--------CGWDRGEACPACQNM 248
Query: 176 M------NWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
+ +E+P + ++ A DL+ ++L D +R+SA + ++HP+
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAK-------DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 108 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 167
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 168 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 226
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 227 V-YTHQSDVWSFGVLMWEIFTLGGSPYPG----IPVEELFKLLKEGHRMDKPANCTNELY 281
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 282 MMMRDCWHAVPSQRP-TFKQLVEDLDR 307
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 105 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 164
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 165 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 223
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 224 V-YTHQSDVWSFGVLMWEIFTLGGSPYPG----IPVEELFKLLKEGHRMDKPANCTNELY 278
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 279 MMMRDCWHAVPSQRP-TFKQLVEDLDR 304
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 17 LVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
L EY + DL+KY+ F + +++L+ + + + H + I+HRDLKP N++
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCC-GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIV 154
Query: 76 MDRKTMTL--KIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+ L KI DLG A+ + T + TL Y APE LL Y+ VD WS
Sbjct: 155 LQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGT 212
Query: 134 IFAELVT 140
+ E +T
Sbjct: 213 LAFECIT 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 17 LVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
L EY + DL+KY+ F + +++L+ + + + H + I+HRDLKP N++
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCC-GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIV 153
Query: 76 MDRKTMTL--KIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+ L KI DLG A+ + T + TL Y APE LL Y+ VD WS
Sbjct: 154 LQPGPQRLIHKIIDLGYAKELDQG-ELCTEFVGTLQYLAPE-LLEQKKYTVTVDYWSFGT 211
Query: 134 IFAELVT 140
+ E +T
Sbjct: 212 LAFECIT 218
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 103 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 162
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 163 QKCIHRDLTARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 221
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 222 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 276
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 277 MMMRDCWHAVPSQRP-TFKQLVEDLDR 302
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 222 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 280
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 281 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 335
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 336 MMMRDCWHAVPSQRP-TFKQLVEDLDR 361
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 83/159 (52%), Gaps = 14/159 (8%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 82 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ T++ KIAD GLAR + +YT + + APE + T ++ D+WS
Sbjct: 140 ILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWS 195
Query: 131 VACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ E+VT + +PG + +Q L +R++ N
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 88 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 145
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 146 ILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK----------WTAPEAINYGT-F 193
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 194 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 240
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 90 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 147
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 148 ILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK----------WTAPEAINYGT-F 195
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 196 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 242
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + ++IAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 83 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 140
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 141 ILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK----------WTAPEAINYGT-F 188
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 189 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 235
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 82 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 140 ILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK----------WTAPEAINYGT-F 187
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 91 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 148
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 149 ILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK----------WTAPEAINYGT-F 196
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 197 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 243
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 37/215 (17%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T +YL+ EY L R ++ T + + +L +++CH ++HRD+KP
Sbjct: 85 TRVYLILEY--APLGTVYRELQKLSRFDEQRTA-TYITELANALSYCHSKRVIHRDIKPE 141
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
NLL+ LKIAD G + P + TL Y PE++ G H VD+WS+
Sbjct: 142 NLLLG-SNGELKIADFGW--SVHAPSSRRDTLCGTLDYLPPEMIEGRMH-DEKVDLWSLG 197
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ E + F + + I R+ T
Sbjct: 198 VLCYEFLVGMPPFEAHTYQETYRRISRVEFT----------------------------- 228
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P+ +G DL+ ++L+++ S+R++ + +EHP+
Sbjct: 229 FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPW 263
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 82 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 140 ILVS-DTLSCKIADFGLARLIEDAEXTAREGAKFPIK----------WTAPEAINYGT-F 187
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 82 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 139
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 140 ILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK----------WTAPEAINYGT-F 187
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 188 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 234
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 30/167 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HRDL+ N
Sbjct: 84 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN 141
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ T++ KIAD GLAR PIK + APE + T +
Sbjct: 142 ILVS-DTLSCKIADFGLARLIEDNEXTAREGAKFPIK----------WTAPEAINYGT-F 189
Query: 123 STAVDMWSVACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN 165
+ D+WS + E+VT + +PG + +Q L +R++ N
Sbjct: 190 TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN 236
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ +++ ++ KG+ + H +HRD+K N+L+ + +K+AD G+A T K
Sbjct: 122 IATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNTF 180
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ S Y + D+WS+ EL P +S++ + +F +
Sbjct: 181 VGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGE---PPNSDMHPMRVLFLI---- 232
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
P+ NP +L V + K + ++ L DPS R +AK+ ++H
Sbjct: 233 -----------------PKNNPPTL---VGDFTKSFKEFIDACLNKDPSFRPTAKELLKH 272
Query: 225 PYF 227
+
Sbjct: 273 KFI 275
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ M Q +GV + H + ++HRDLK NL ++ M +KI D GLA ++
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDL 186
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
T Y APEVL H S VD+WS+ CI L+ F + + I + +
Sbjct: 187 CGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSV 245
Query: 165 NEKVWPGVSSLMN--WHEYPQWNPQ 187
+ P S+L+ H P P
Sbjct: 246 PRHINPVASALIRRMLHADPTLRPS 270
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL-LMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N+ L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL-LMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N+ L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL-LMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N+ L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
VK + +L + H GI++RDLKP N+L+D + +K+ D GL++ KK
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKESIDHEKKAYSF 186
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGT 163
T+ Y APEV+ H +A D WS + E++T T F G + + I + LG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245
Query: 164 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPN 195
P + + P SL+ + NP + A P+
Sbjct: 246 P-QFLSPEAQSLLRM--LFKRNPANRLGAGPD 274
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
VK + +L G+ H GI++RDLKP N+L+D + +K+ D GL++ KK
Sbjct: 132 VKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGH-IKLTDFGLSKEAIDHEKKAYSF 190
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGT 163
T+ Y APEV+ H S + D WS + E++T + F G + + I + LG
Sbjct: 191 CGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGM 249
Query: 164 PN 165
P
Sbjct: 250 PQ 251
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 42/224 (18%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
LYL+ EY+ + + G + +T + ++ + H GI++RDLKP N+
Sbjct: 96 LYLILEYLSGG--ELFMQLEREGIFME-DTACFYLAEISMALGHLHQKGIIYRDLKPENI 152
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+++ + +K+ D GL + ++ TH T+ Y APE+L+ S H + AVD WS+
Sbjct: 153 MLNHQGH-VKLTDFGLCKE-SIHDGTVTHXFCGTIEYMAPEILMRSGH-NRAVDWWSLGA 209
Query: 134 IFAELVTKTALFPGDSELQQLLHIFRL-LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ +++T F G++ + + I + L P
Sbjct: 210 LMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---------------------------- 241
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYFDDLD 231
P L ++ DLL+++L+ + + R+ A + HP+F ++
Sbjct: 242 -PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 101/224 (45%), Gaps = 42/224 (18%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
LYL+ EY+ + + G + +T + ++ + H GI++RDLKP N+
Sbjct: 96 LYLILEYLSGG--ELFMQLEREGIFME-DTACFYLAEISMALGHLHQKGIIYRDLKPENI 152
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+++ + +K+ D GL + ++ TH T+ Y APE+L+ S H + AVD WS+
Sbjct: 153 MLNHQGH-VKLTDFGLCKE-SIHDGTVTHTFCGTIEYMAPEILMRSGH-NRAVDWWSLGA 209
Query: 134 IFAELVTKTALFPGDSELQQLLHIFRL-LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
+ +++T F G++ + + I + L P
Sbjct: 210 LMYDMLTGAPPFTGENRKKTIDKILKCKLNLP---------------------------- 241
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYFDDLD 231
P L ++ DLL+++L+ + + R+ A + HP+F ++
Sbjct: 242 -PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 9 KEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGIL 65
++G + L+ E++ + LK+Y+ + +N + L Y Q+CKG+ + +
Sbjct: 94 EDGGNGIKLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTH 121
HRDL N+L++ + +KI D GL +A + T + WY APE L+ S
Sbjct: 149 HRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKF 206
Query: 122 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 181
Y A D+WS EL+T DS+ + +++G + ++ V+ L+N +
Sbjct: 207 Y-IASDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIGPTHGQMT--VTRLVNTLKE 258
Query: 182 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 223
+ P PN + L+ + ++ PS R S + +E
Sbjct: 259 GKRLP-----CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 93/217 (42%), Gaps = 31/217 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH-GILHRDLKPHN 73
+++ E MDT L K+ + G+ IP + + + + K + H ++HRD+KP N
Sbjct: 81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 140
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL---LGSTHYSTAVDMWS 130
+L++ +K+ D G++ + K + Y APE + L YS D+WS
Sbjct: 141 VLIN-ALGQVKMCDFGISGYLVDDVAKDI-DAGCKPYMAPERINPELNQKGYSVKSDIWS 198
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
+ EL FP DS GTP ++ L E P +PQ A
Sbjct: 199 LGITMIELA--ILRFPYDS-----------WGTPFQQ-------LKQVVEEP--SPQLPA 236
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ +D Q L+ + +R + + M+HP+F
Sbjct: 237 D---KFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL-LMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N+ L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 22/184 (11%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM+ L ++++ +G + +N + + Q+ +G+AF +HR+L+ N
Sbjct: 78 IYIITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAAN 135
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ T++ KIAD GLAR + +YT + + APE + T ++ D+WS
Sbjct: 136 ILVS-DTLSCKIADFGLAR--LIEDNEYTAREGAKFPIKWTAPEAINYGT-FTIKSDVWS 191
Query: 131 VACIFAELVTKTAL-FPGDSE---LQQLLHIFRLLGTPN--EKVWPGVSSLMN--WHEYP 182
+ E+VT + +PG + +Q L +R++ N E+++ LM W E P
Sbjct: 192 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 247
Query: 183 QWNP 186
+ P
Sbjct: 248 EDRP 251
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL-LMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N+ L+DR +KI D G
Sbjct: 103 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 163 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 220
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 221 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 256
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 257 KDPKKRMTIQDSLQHPW 273
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ M Q +GV + H + ++HRDLK NL ++ M +KI D GLA ++
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKDL 202
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 145
T Y APEVL H S VD+WS+ CI L+ F
Sbjct: 203 CGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 24/199 (12%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EY+ L Y+RS G+ + + + + Y +C+G+AF H +HRDL N
Sbjct: 78 IYIVTEYISNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN 134
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWS 130
L+DR + +K++D G+ R + L +Y + T + + APEV YS+ D+W+
Sbjct: 135 CLVDR-DLCVKVSDFGMTR-YVLD-DQYVSSVGTKFPVKWSAPEV-FHYFKYSSKSDVWA 190
Query: 131 VACIFAELVTKTALFPGD----SELQQLLHIFRLLGTP---NEKVWPGVSSLMNWHEYPQ 183
+ E+ + + P D SE+ + L P ++ ++ + S WHE P+
Sbjct: 191 FGILMWEVFSLGKM-PYDLYTNSEVVLKVSQGHRLYRPHLASDTIYQIMYSC--WHELPE 247
Query: 184 WNP---QSLATAVPNLDKD 199
P Q L++ P +KD
Sbjct: 248 KRPTFQQLLSSIEPLREKD 266
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL-LMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N+ L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 103 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 162
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 163 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 220
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 221 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 256
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 257 KDPKKRMTIQDSLQHPW 273
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILH 66
E +T L LV M+ D++ +I + + +N +++ Y Q+ G+ H I++
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
RDLKP N+L+D ++I+DLGLA K T + APE+LLG Y +V
Sbjct: 313 RDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYDFSV 370
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP-QWN 185
D +++ E++ FR G E L YP +++
Sbjct: 371 DYFALGVTLYEMIAARG-------------PFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 186 PQSLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYFDDL 230
P S D E +LQ DP KR+ S HP F D+
Sbjct: 418 PAS------------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILH 66
E +T L LV M+ D++ +I + + +N +++ Y Q+ G+ H I++
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
RDLKP N+L+D ++I+DLGLA K T + APE+LLG Y +V
Sbjct: 313 RDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYDFSV 370
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP-QWN 185
D +++ E++ FR G E L YP +++
Sbjct: 371 DYFALGVTLYEMIAARG-------------PFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 186 PQSLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYFDDL 230
P S D E +LQ DP KR+ S HP F D+
Sbjct: 418 PAS------------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILH 66
E +T L LV M+ D++ +I + + +N +++ Y Q+ G+ H I++
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
RDLKP N+L+D ++I+DLGLA K T + APE+LLG Y +V
Sbjct: 313 RDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYDFSV 370
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP-QWN 185
D +++ E++ FR G E L YP +++
Sbjct: 371 DYFALGVTLYEMIAARG-------------PFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 186 PQSLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYFDDL 230
P S D E +LQ DP KR+ S HP F D+
Sbjct: 418 PAS------------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
VK + +L + H GI++RDLKP N+L+D + +K+ D GL++ KK
Sbjct: 128 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSF 186
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGT 163
T+ Y APEV+ H +A D WS + E++T T F G + + I + LG
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 245
Query: 164 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPN 195
P + + P SL+ + NP + A P+
Sbjct: 246 P-QFLSPEAQSLLRM--LFKRNPANRLGAGPD 274
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ M Q +GV + H + ++HRDLK NL ++ M +KI D GLA ++
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKXL 202
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 145
T Y APEVL H S VD+WS+ CI L+ F
Sbjct: 203 CGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR K T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPG----IPVEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 40/225 (17%)
Query: 10 EGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHG--ILH 66
+G+ + LV E + LK Y++ F+ + ++S Q+ KG+ F H I+H
Sbjct: 99 KGKKCIVLVTELXTSGTLKTYLKRFKVX----KIKVLRSWCRQILKGLQFLHTRTPPIIH 154
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTA 125
RDLK N+ + T ++KI DLGLA TL + ++ T + APE Y +
Sbjct: 155 RDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAKAVIGTPEFXAPEXY--EEKYDES 209
Query: 126 VDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWN 185
VD+++ E T + SE Q I+R +V GV
Sbjct: 210 VDVYAFGXCXLEXATSEYPY---SECQNAAQIYR-------RVTSGV------------K 247
Query: 186 PQSL-ATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDD 229
P S A+P + +++E ++ + +R S K + H +F +
Sbjct: 248 PASFDKVAIPEVK----EIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
VK + +L + H GI++RDLKP N+L+D + +K+ D GL++ KK
Sbjct: 129 VKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG-HIKLTDFGLSKESIDHEKKAYSF 187
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL-LGT 163
T+ Y APEV+ H +A D WS + E++T T F G + + I + LG
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSA-DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGM 246
Query: 164 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPN 195
P + + P SL+ + NP + A P+
Sbjct: 247 P-QFLSPEAQSLLRM--LFKRNPANRLGAGPD 275
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILH 66
E +T L LV M+ D++ +I + + +N +++ Y Q+ G+ H I++
Sbjct: 255 ETKTDLCLVMTIMNGGDIRYHIYNVDE--DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIY 312
Query: 67 RDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
RDLKP N+L+D ++I+DLGLA K T + APE+LLG Y +V
Sbjct: 313 RDLKPENVLLDDDG-NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE-EYDFSV 370
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP-QWN 185
D +++ E++ FR G E L YP +++
Sbjct: 371 DYFALGVTLYEMIAARG-------------PFRARGEKVENKELKQRVLEQAVTYPDKFS 417
Query: 186 PQSLATAVPNLDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYFDDL 230
P S D E +LQ DP KR+ S HP F D+
Sbjct: 418 PAS------------KDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 87 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 141
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 142 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 196
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 27/222 (12%)
Query: 9 KEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGIL 65
++G + L+ E++ + LK+Y+ + +N + L Y Q+CKG+ + +
Sbjct: 82 EDGGNGIKLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTH 121
HRDL N+L++ + +KI D GL +A + T + WY APE L+ S
Sbjct: 137 HRDLAARNVLVESEHQ-VKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKF 194
Query: 122 YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY 181
Y A D+WS EL+T DS+ + +++G + ++ V+ L+N +
Sbjct: 195 Y-IASDVWSFGVTLHELLTYC-----DSDSSPMALFLKMIGPTHGQMT--VTRLVNTLKE 246
Query: 182 PQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 223
+ P PN + L+ + ++ PS R S + +E
Sbjct: 247 GKRLP-----CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 283
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 89 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 143
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 144 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 198
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 199 FSVASDVWSFGVVLYELFT 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPAFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN-LLMDRKTMT--LKIADLG 89
F E++ + Q+ GV + H I H DLKP N +L+DR +KI D G
Sbjct: 104 FLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
LA ++ + T + APE+ + DMWS+ I L++ + F GD+
Sbjct: 164 LAHKIDFG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGDT 221
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L ++ S +N+ ++ + A A D + ++L
Sbjct: 222 KQETLANV----------------SAVNYEFEDEYFSNTSALAK--------DFIRRLLV 257
Query: 210 YDPSKRISAKKAMEHPY 226
DP KR++ + +++HP+
Sbjct: 258 KDPKKRMTIQDSLQHPW 274
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 115 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 169
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 170 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 224
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 225 FSVASDVWSFGVVLYELFT 243
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ M Q +GV + H + ++HRDLK NL ++ M +KI D GLA ++
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-DDMDVKIGDFGLATKIEFDGERKKTL 202
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 145
T Y APEVL H S VD+WS+ CI L+ F
Sbjct: 203 CGTPNYIAPEVLCKKGH-SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 91 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 145
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 146 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 200
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 201 FSVASDVWSFGVVLYELFT 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 90 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 144
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 145 DLATRNILVENEN-RVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFWY-APESLTESK- 199
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 200 FSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 138
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 139 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 193
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 82 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 136
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 137 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 191
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 192 FSVASDVWSFGVVLYELFT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 88 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 142
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 143 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 197
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 198 FSVASDVWSFGVVLYELFT 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 138
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 139 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 193
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 102 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 156
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 157 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 211
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 83 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 137
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 138 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 192
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 193 FSVASDVWSFGVVLYELFT 211
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 94/213 (44%), Gaps = 31/213 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L++V E+++ I + + E + ++ + + +++ H G++HRD+K ++
Sbjct: 117 LWVVMEFLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQGVIHRDIKSDSI 172
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ +K++D G + + K + T ++ APEV + Y T VD+WS+ +
Sbjct: 173 LLTSDG-RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV-ISRLPYGTEVDIWSLGIM 230
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
E++ + + LQ + I L P K VSS++
Sbjct: 231 VIEMIDGEPPYFNEPPLQAMRRIRDSL-PPRVKDLHKVSSVLR----------------- 272
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
L+ ML +PS+R +A++ + HP+
Sbjct: 273 -------GFLDLMLVREPSQRATAQELLGHPFL 298
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 102 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 156
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 157 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 211
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 212 FSVASDVWSFGVVLYELFT 230
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ Y +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPG----IPVEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 30/184 (16%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLL---MDRKTMTLKIADLGLARAFTLPIKKYTH 103
+L+ Q+ V + H GI+HRDLKP NLL D ++ + I+D GL++ +
Sbjct: 124 TLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIM-ISDFGLSK-MEGKGDVMST 181
Query: 104 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT 163
T Y APEV L YS AVD WS+ I L+ F +++ + I +
Sbjct: 182 ACGTPGYVAPEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYE 240
Query: 164 PNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAME 223
+ W +S D + +++ DP+KR + ++A
Sbjct: 241 FDSPYWDDISD------------------------SAKDFIRNLMEKDPNKRYTCEQAAR 276
Query: 224 HPYF 227
HP+
Sbjct: 277 HPWI 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EYM D+ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +K+AD G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IKVADFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EYM D+ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYMPGGDMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +K+AD G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IKVADFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 84 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 143
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HRDL N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 144 NAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLK 202
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 203 DGV-FTTSSDMWSFGVVLWEITS 224
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HRDL N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 147 NAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLK 205
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 206 DGV-FTTSSDMWSFGVVLWEITS 227
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ Y +L++Y+R+ R G E + + S YQL +G+ +
Sbjct: 116 LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 176 QKCIHRDLAARNVLVTENNV-MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSS---- 174
Y+ D+WS + E+ T + +PG + +F+LL + P +
Sbjct: 235 V-YTHQSDVWSFGVLMWEIFTLGGSPYPG----IPVEELFKLLKEGHRMDKPANCTNELY 289
Query: 175 -LMN--WHEYPQWNPQSLATAVPNLDK 198
+M WH P P + V +LD+
Sbjct: 290 MMMRDCWHAVPSQRP-TFKQLVEDLDR 315
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HRDL N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 147 NAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLK 205
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 206 DGV-FTTSSDMWSFGVVLWEITS 227
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 35/226 (15%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T L+L+ +Y++ + + E + V+ + ++ + H GI++RD+K
Sbjct: 132 TKLHLILDYINGG---ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLE 188
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGS-THYSTAVDMWS 130
N+L+D + + D GL++ F + ++ T+ Y AP+++ G + + AVD WS
Sbjct: 189 NILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWS 247
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
+ + EL+T + F D E I R + L + YPQ +LA
Sbjct: 248 LGVLMYELLTGASPFTVDGEKNSQAEISRRI-------------LKSEPPYPQ-EMSALA 293
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYFDDLD 231
DL++++L DP KR+ A + EH +F ++
Sbjct: 294 K----------DLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 84 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 138
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 139 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEFFKVKEPGESPIFWY-APESLTESK- 193
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 194 FSVASDVWSFGVVLYELFT 212
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HRDL N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 147 NAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLK 205
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 206 DGV-FTTSSDMWSFGVVLWEITS 227
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ E++ L++Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 87 GRRNLKLIMEFLPYGSLREYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 141
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 142 DLATRNILVENEN-RVKIGDFGLTKV--LPQDKEXXKVKEPGESPIFWY-APESLTESK- 196
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E RT + L+ E + + F E++ S + Q+ GV + H I H DL
Sbjct: 85 ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 70 KPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
KP N+++ K + +K+ D GLA + ++ + T + APE+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
DMWS+ I L++ + F GD++ + L +I + +E+ + S L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK--------- 250
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
D + ++L + KR++ ++A+ HP+ +D
Sbjct: 251 ---------------DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y+++ + ++ +K L Y Q+CKG+ + +HR
Sbjct: 87 GRRNLKLIMEYLPYGSLRDYLQAHAER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 141
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
DL N+L++ + +KI D GL + LP K ++ WY APE L S
Sbjct: 142 DLATRNILVENEN-RVKIGDFGLTK--VLPQDKEXXKVKEPGESPIFWY-APESLTESK- 196
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 197 FSVASDVWSFGVVLYELFT 215
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ +++ ++ KG+ + H +HRD+K N+L+ +K+AD G+A T K
Sbjct: 121 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXF 179
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 180 VGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI---- 231
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
P+ NP +L N K + +E L +PS R +AK+ ++H
Sbjct: 232 -----------------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271
Query: 225 PYF 227
+
Sbjct: 272 KFI 274
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 49/237 (20%)
Query: 15 LYLVFEYM-DTDLKKYI---RSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
YLVFE M + +I R F + ++ V V S + F H GI HRDLK
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL-------DFLHNKGIAHRDLK 138
Query: 71 PHNLLMD--RKTMTLKIADLGLARAFTL-----PIKKYTHEILT----LWYRAPEVLLG- 118
P N+L + + +KI D L L PI T E+LT Y APEV+
Sbjct: 139 PENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIS--TPELLTPCGSAEYMAPEVVEAF 196
Query: 119 ---STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 175
++ Y D+WS+ I L++ F G G + P ++
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD--------CGWDRGEACPACQNM 248
Query: 176 M------NWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
+ +E+P + ++ A DL+ ++L D +R+SA + ++HP+
Sbjct: 249 LFESIQEGKYEFPDKDWAHISCAAK-------DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E RT + L+ E + + F E++ S + Q+ GV + H I H DL
Sbjct: 85 ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 70 KPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
KP N+++ K + +K+ D GLA + ++ + T + APE+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
DMWS+ I L++ + F GD++ + L +I + +E+ + S L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK--------- 250
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
D + ++L + KR++ ++A+ HP+ +D
Sbjct: 251 ---------------DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ +++ ++ KG+ + H +HRD+K N+L+ +K+AD G+A T K
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNXF 164
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 165 VGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI---- 216
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
P+ NP +L N K + +E L +PS R +AK+ ++H
Sbjct: 217 -----------------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKH 256
Query: 225 PYF 227
+
Sbjct: 257 KFI 259
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHRD 68
GR L LV EY+ + +R F Q ++ + L+Y Q+CKG+ + +HRD
Sbjct: 84 GRQSLRLVMEYLPSGC---LRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 139
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYST 124
L N+L++ + +KIAD GLA+ L Y + WY APE L + +S
Sbjct: 140 LAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNI-FSR 196
Query: 125 AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 173
D+WS + EL T D R++G+ E+ P +S
Sbjct: 197 QSDVWSFGVVLYELFTYC-----DKSCSPSAEFLRMMGS--ERDVPALS 238
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E RT + L+ E + + F E++ S + Q+ GV + H I H DL
Sbjct: 85 ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 70 KPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
KP N+++ K + +K+ D GLA + ++ + T + APE+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
DMWS+ I L++ + F GD++ + L +I + +E+ + S L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK--------- 250
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
D + ++L + KR++ ++A+ HP+ +D
Sbjct: 251 ---------------DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ +++ ++ KG+ + H +HRD+K N+L+ +K+AD G+A T K
Sbjct: 126 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTF 184
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 185 VGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI---- 236
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
P+ NP +L N K + +E L +PS R +AK+ ++H
Sbjct: 237 -----------------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKH 276
Query: 225 PYF 227
+
Sbjct: 277 KFI 279
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 109 LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDR 227
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 228 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 286
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 287 DCWHAVPSQRP-TFKQLVEDLDR 308
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
L++ E+ D L+++I R GE + L Q+ KGV + H +++RDLKP N
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN 152
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+ + T +KI D GL + K+ + TL Y +PE + S Y VD++++
Sbjct: 153 IFL-VDTKQVKIGDFGLVTSLKNDGKRXRSK-GTLRYMSPE-QISSQDYGKEVDLYALGL 209
Query: 134 IFAELV 139
I AEL+
Sbjct: 210 ILAELL 215
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 37/184 (20%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-EILTLWYRAP 113
G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H + T Y AP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHASVGTHGYMAP 359
Query: 114 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 173
EVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ-------------------H 394
Query: 174 SLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYF 227
+ HE + ++A +P+ + LLE +LQ D ++R+ A++ E P+F
Sbjct: 395 KTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
Query: 228 DDLD 231
LD
Sbjct: 454 RSLD 457
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 37/184 (20%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-EILTLWYRAP 113
G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H + T Y AP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHASVGTHGYMAP 359
Query: 114 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 173
EVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ-------------------H 394
Query: 174 SLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYF 227
+ HE + ++A +P+ + LLE +LQ D ++R+ A++ E P+F
Sbjct: 395 KTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
Query: 228 DDLD 231
LD
Sbjct: 454 RSLD 457
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 95/233 (40%), Gaps = 31/233 (13%)
Query: 10 EGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E T YLVFE + + +I+ + E V+ + L F H GI HRD
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL----DFLHTKGIAHRD 136
Query: 69 LKPHNLLMD--RKTMTLKIADLGLARAFTL-----PIK--KYTHEILTLWYRAPEVLL-- 117
LKP N+L + K +KI D L L PI + T + Y APEV+
Sbjct: 137 LKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVF 196
Query: 118 --GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSL 175
+T Y D+WS+ + +++ F G + K++ +
Sbjct: 197 TDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQE- 255
Query: 176 MNWHEYP--QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
+E+P W ++ + DL+ ++L D +R+SA + ++HP+
Sbjct: 256 -GKYEFPDKDW---------AHISSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 82/181 (45%), Gaps = 26/181 (14%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ E+M L +++S G P+ + Q+ +G+AF +HRDL+ N
Sbjct: 251 IYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 308
Query: 74 LLMDRKTMTLKIADLGLAR-AFTLPIKKYTHEILTLWYRAPEVL-LGSTHYSTAVDMWSV 131
+L+ ++ KIAD GLAR PIK + APE + GS ++ D+WS
Sbjct: 309 ILVS-ASLVCKIADFGLARVGAKFPIK----------WTAPEAINFGS--FTIKSDVWSF 355
Query: 132 ACIFAELVTKTAL-FPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN-----WHEYPQWN 185
+ E+VT + +PG S + + + R P + P L N W P+
Sbjct: 356 GILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP--EELYNIMMRCWKNRPEER 413
Query: 186 P 186
P
Sbjct: 414 P 414
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 19/139 (13%)
Query: 11 GRTVLYLVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L L+ EY+ L+ Y++ ++ ++ +K L Y Q+CKG+ + +HR
Sbjct: 85 GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEYLGTKRYIHR 139
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TLWYRAPEVLLGSTH 121
+L N+L++ + +KI D GL + LP K +++ WY APE L S
Sbjct: 140 NLATRNILVENEN-RVKIGDFGLTKV--LPQDKEYYKVKEPGESPIFWY-APESLTESK- 194
Query: 122 YSTAVDMWSVACIFAELVT 140
+S A D+WS + EL T
Sbjct: 195 FSVASDVWSFGVVLYELFT 213
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 29/183 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ +++ ++ KG+ + H +HRD+K N+L+ +K+AD G+A T K
Sbjct: 106 IATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG-EVKLADFGVAGQLTDTQIKRNTF 164
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ S Y + D+WS+ EL P SEL + +F +
Sbjct: 165 VGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELARGE---PPHSELHPMKVLFLI---- 216
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
P+ NP +L N K + +E L +PS R +AK+ ++H
Sbjct: 217 -----------------PKNNPPTLEG---NYSKPLKEFVEACLNKEPSFRPTAKELLKH 256
Query: 225 PYF 227
+
Sbjct: 257 KFI 259
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E RT + L+ E + + F E++ S + Q+ GV + H I H DL
Sbjct: 85 ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 70 KPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
KP N+++ K + +K+ D GLA + ++ + T + APE+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
DMWS+ I L++ + F GD++ + L +I + +E+ + S L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK--------- 250
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
D + ++L + KR++ ++A+ HP+ +D
Sbjct: 251 ---------------DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 80 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 139
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 140 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLK 198
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 199 DGV-FTTYSDVWSFGVVLWEIAT 220
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 37/184 (20%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-EILTLWYRAP 113
G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H + T Y AP
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHASVGTHGYMAP 358
Query: 114 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 173
EVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ-------------------H 393
Query: 174 SLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYF 227
+ HE + ++A +P+ + LLE +LQ D ++R+ A++ E P+F
Sbjct: 394 KTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 452
Query: 228 DDLD 231
LD
Sbjct: 453 RSLD 456
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 85/184 (46%), Gaps = 37/184 (20%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTH-EILTLWYRAP 113
G+ H +++RDLKP N+L+D ++I+DLGLA F+ KK H + T Y AP
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHG-HVRISDLGLACDFS---KKKPHASVGTHGYMAP 359
Query: 114 EVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 173
EVL Y ++ D +S+ C+ +L+ G S +Q
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLR------GHSPFRQ-------------------H 394
Query: 174 SLMNWHEYPQWNPQSLATAVPN-LDKDGLDLLEQMLQYDPSKRI-----SAKKAMEHPYF 227
+ HE + ++A +P+ + LLE +LQ D ++R+ A++ E P+F
Sbjct: 395 KTKDKHEIDRMT-LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF 453
Query: 228 DDLD 231
LD
Sbjct: 454 RSLD 457
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E RT + L+ E + + F E++ S + Q+ GV + H I H DL
Sbjct: 85 ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 70 KPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
KP N+++ K + +K+ D GLA + ++ + T + APE+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
DMWS+ I L++ + F GD++ + L +I + +E+ + S L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK--------- 250
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
D + ++L + KR++ ++A+ HP+ +D
Sbjct: 251 ---------------DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 25/219 (11%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + + + + + + H I HRD+K
Sbjct: 130 GRKCLLIVXECLDGG-ELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVK 188
Query: 71 PHNLL--MDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T T T +Y APEV LG Y + D
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPYYVAPEV-LGPEKYDKSCDX 246
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQS 188
WS+ I L+ F + L + PG + + +Y NP+
Sbjct: 247 WSLGVIXYILLCGYPPFYSNHGL---------------AISPGXKTRIRXGQYEFPNPE- 290
Query: 189 LATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ ++ L+ +L+ +P++R + + HP+
Sbjct: 291 ----WSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWI 325
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 148
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 149 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLK 207
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 208 DGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 96/225 (42%), Gaps = 32/225 (14%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
E RT + L+ E + + F E++ S + Q+ GV + H I H DL
Sbjct: 85 ENRTDVVLILELVSGG---ELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDL 141
Query: 70 KPHNLLMDRKTMT---LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAV 126
KP N+++ K + +K+ D GLA + ++ + T + APE+ +
Sbjct: 142 KPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-EFKNIFGTPEFVAPEI-VNYEPLGLEA 199
Query: 127 DMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNP 186
DMWS+ I L++ + F GD++ + L +I + +E+ + S L
Sbjct: 200 DMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK--------- 250
Query: 187 QSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
D + ++L + KR++ ++A+ HP+ +D
Sbjct: 251 ---------------DFIRKLLVKETRKRLTIQEALRHPWITPVD 280
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + + + F H + ++HRD+K N+L+ ++K+ D G T K +
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXM 176
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP
Sbjct: 177 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP 234
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
+ NP+ L+ D L + L+ D KR SAK+ ++H
Sbjct: 235 ELQ-----------------NPEKLSAIF-------RDFLNRCLEMDVEKRGSAKELLQH 270
Query: 225 PYF 227
+
Sbjct: 271 QFL 273
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HRDL N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 147 NAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK 205
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 206 DGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + + + F H + ++HRD+K N+L+ ++K+ D G T K +
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSXM 177
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP
Sbjct: 178 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP 235
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
+ NP+ L+ D L + L+ D KR SAK+ ++H
Sbjct: 236 ELQ-----------------NPEKLSAIF-------RDFLNRCLEMDVEKRGSAKELIQH 271
Query: 225 PYF 227
+
Sbjct: 272 QFL 274
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHRD 68
GR L LV EY+ + +R F Q ++ + L+Y Q+CKG+ + +HRD
Sbjct: 97 GRQSLRLVMEYLPSGC---LRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 152
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYST 124
L N+L++ + +KIAD GLA+ L Y + WY APE L + +S
Sbjct: 153 LAARNILVESEA-HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNI-FSR 209
Query: 125 AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVS 173
D+WS + EL T D R++G E+ P +S
Sbjct: 210 QSDVWSFGVVLYELFTYC-----DKSCSPSAEFLRMMGC--ERDVPALS 251
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + + + F H + ++HRD+K N+L+ ++K+ D G T K +
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSEM 176
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP
Sbjct: 177 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP 234
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
+ NP+ L+ D L + L D KR SAK+ ++H
Sbjct: 235 ELQ-----------------NPEKLSAIF-------RDFLNRCLDMDVEKRGSAKELLQH 270
Query: 225 PYF 227
+
Sbjct: 271 QFL 273
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHRD 68
GR L LV EY+ + +R F Q ++ + L+Y Q+CKG+ + +HRD
Sbjct: 85 GRQSLRLVMEYLPSGC---LRDFLQR-HRARLDASRLLLYSSQICKGMEYLGSRRCVHRD 140
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYST 124
L N+L++ + +KIAD GLA+ L Y + WY APE L + +S
Sbjct: 141 LAARNILVESEAH-VKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESLSDNI-FSR 197
Query: 125 AVDMWSVACIFAELVT 140
D+WS + EL T
Sbjct: 198 QSDVWSFGVVLYELFT 213
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 86 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 145
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HRDL N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 146 NAKKFVHRDLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK 204
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 205 DGV-FTTSSDMWSFGVVLWEITS 226
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 102 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 161
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 162 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 220
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 221 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 279
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 280 DCWHAVPSQRP-TFKQLVEDLDR 301
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 109 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 227
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 228 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 286
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 287 DCWHAVPSQRP-TFKQLVEDLDR 308
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 101 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 160
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 161 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 219
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 220 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 278
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 279 DCWHAVPSQRP-TFKQLVEDLDR 300
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 98 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 157
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 158 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 216
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 217 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 275
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 276 DCWHAVPSQRP-TFKQLVEDLDR 297
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 109 LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 227
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 228 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 286
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 287 DCWHAVPSQRP-TFKQLVEDLDR 308
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 94 LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 153
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 154 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 212
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 213 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 271
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 272 DCWHAVPSQRP-TFKQLVEDLDR 293
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTM-TLKIADLGLARAFTLPIKKYTHEILTLW 109
QL GV++CH + HRDLK N L+D LKI D G +++ L + + + T
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPA 181
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKV 168
Y APEVLL + D+WS ++ F E + I R+L
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL------- 234
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++ A+P+ + + L+ ++ DP+KRIS + H
Sbjct: 235 -------------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHE 275
Query: 226 YF 227
+F
Sbjct: 276 WF 277
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 154
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 155 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 213
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 214 DGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 11 GRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
GR L LV EY+ + L+ +++ R ++ + L+Y Q+CKG+ + +HR
Sbjct: 81 GRPELRLVMEYLPSGCLRDFLQRHRAR-----LDASRLLLYSSQICKGMEYLGSRRCVHR 135
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTL----PIKKYTHEILTLWYRAPEVLLGSTHYS 123
DL N+L++ + +KIAD GLA+ L + + + WY APE L +S
Sbjct: 136 DLAARNILVESEA-HVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APES-LSDNIFS 192
Query: 124 TAVDMWSVACIFAELVT 140
D+WS + EL T
Sbjct: 193 RQSDVWSFGVVLYELFT 209
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 51/228 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 131 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 75 LMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVL--LGSTHYS------ 123
L+ LK+ D G+A T + K + ++ T+ Y PE + + S+ +
Sbjct: 187 LI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 124 --TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNW 178
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 244 ISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI---------- 287
Query: 179 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 288 -EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTM-TLKIADLGLARAFTLPIKKYTHEILTLW 109
QL GV++CH + HRDLK N L+D LKI D G +++ L + + + T
Sbjct: 122 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPA 180
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKV 168
Y APEVLL + D+WS ++ F E + I R+L
Sbjct: 181 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL------- 233
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++ A+P+ + + L+ ++ DP+KRIS + H
Sbjct: 234 -------------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHE 274
Query: 226 YF 227
+F
Sbjct: 275 WF 276
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 51/228 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 131 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 75 LMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVL--LGSTHYS------ 123
L+ LK+ D G+A T + K + ++ T+ Y PE + + S+ +
Sbjct: 187 LI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 124 --TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNW 178
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 244 ISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI---------- 287
Query: 179 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 288 -EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 86 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 145
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 146 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 204
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 205 DGV-FTTYSDVWSFGVVLWEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 141
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 142 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 200
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 201 DGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 89 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 148
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 149 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 207
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 208 DGV-FTTYSDVWSFGVVLWEIAT 229
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 51/228 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 84 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 139
Query: 75 LMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVL--LGSTHYS------ 123
L+ LK+ D G+A T + K + ++ T+ Y PE + + S+ +
Sbjct: 140 LI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMPPEAIKDMSSSRENGKSKSK 196
Query: 124 --TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNW 178
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 197 ISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI---------- 240
Query: 179 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 241 -EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 276
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 46 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 105
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 113 RSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD 170
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 87/198 (43%), Gaps = 47/198 (23%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM--TLKIADLGLARAFT---------L 96
+ Q+ + V F H G++HRDLKP N+ TM +K+ D GL A
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFF---TMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 97 PIKKY---THEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQ 153
P+ Y T ++ T Y +PE + G++ YS VD++S+ I EL L+P +++++
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFEL-----LYPFSTQMER 233
Query: 154 LLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPS 213
+ R L +P + + EY +++ ML P
Sbjct: 234 V----RTLTDVRNLKFPPLFTQKYPCEYV--------------------MVQDMLSPSPM 269
Query: 214 KRISAKKAMEHPYFDDLD 231
+R A +E+ F+DLD
Sbjct: 270 ERPEAINIIENAVFEDLD 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 147
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 148 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 206
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 207 DGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 88 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 147
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 148 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 206
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 207 DGV-FTTYSDVWSFGVVLWEIAT 228
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 51/228 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 103 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 158
Query: 75 LMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVL--LGSTHYS------ 123
L+ LK+ D G+A T + K + ++ T+ Y PE + + S+ +
Sbjct: 159 LI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMPPEAIKDMSSSRENGKSKSK 215
Query: 124 --TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNW 178
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 216 ISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI---------- 259
Query: 179 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 260 -EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ R G E + + S YQ+ +G+ +
Sbjct: 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 209
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 210 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 268
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 269 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 327
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 328 DCWHAVPSQRP-TFKQLVEDLDR 349
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 51/228 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 87 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 142
Query: 75 LMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVL--LGSTHYS------ 123
L+ LK+ D G+A T + K + ++ T+ Y PE + + S+ +
Sbjct: 143 LI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMPPEAIKDMSSSRENGKSKSK 199
Query: 124 --TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNW 178
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 200 ISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI---------- 243
Query: 179 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 244 -EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 279
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 51/228 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 83 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 138
Query: 75 LMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVL--LGSTHYS------ 123
L+ LK+ D G+A T + K + ++ T+ Y PE + + S+ +
Sbjct: 139 LI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGTVNYMPPEAIKDMSSSRENGKSKSK 195
Query: 124 --TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNW 178
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 196 ISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI---------- 239
Query: 179 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 240 -EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 275
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + + + F H + ++HRD+K N+L+ ++K+ D G T K +
Sbjct: 118 IAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTM 176
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP
Sbjct: 177 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP 234
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
+ NP+ L+ D L + L D KR SAK+ ++H
Sbjct: 235 ELQ-----------------NPEKLSAIF-------RDFLNRCLDMDVEKRGSAKELLQH 270
Query: 225 PYF 227
+
Sbjct: 271 QFL 273
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 174
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 173
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 117 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 176
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 177 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 235
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 236 DGV-FTTYSDVWSFGVVLWEIAT 257
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 174
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 103/254 (40%), Gaps = 48/254 (18%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM 76
L+FE + L + I R + +K ++ K + + + H DLKP N+L+
Sbjct: 113 LIFEPLGPSLYEIIT--RNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL 170
Query: 77 D------------------------RKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRA 112
D K+ +K+ D G A T + I T YRA
Sbjct: 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA---TFKSDYHGSIINTRQYRA 227
Query: 113 PEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG-TPNEKVWPG 171
PEV+L + + + DMWS C+ AEL T + LF ++ L + ++ P ++
Sbjct: 228 PEVIL-NLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEA 286
Query: 172 V----SSLMNWHEYPQWNPQSLAT--AVPNLDKD-----------GLDLLEQMLQYDPSK 214
S +N E P++ ++ ++ ++ K D L +LQ DP+
Sbjct: 287 TKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTL 346
Query: 215 RISAKKAMEHPYFD 228
R S + ++H + +
Sbjct: 347 RPSPAELLKHKFLE 360
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 173
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 228
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 32/182 (17%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTM-TLKIADLGLARAFTLPIKKYTHEILTLW 109
QL GV++ H + HRDLK N L+D LKIAD G ++A L + + + T
Sbjct: 123 QLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS-AVGTPA 181
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKV 168
Y APEVLL + D+WS ++ F E + I R+L
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL------- 234
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++ A+P+ + + L+ ++ DP+KRIS + H
Sbjct: 235 -------------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHE 275
Query: 226 YF 227
+F
Sbjct: 276 WF 277
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 46 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 105
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD 170
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 224
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 46 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 105
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 116 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD 173
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 174 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 227
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 196
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 251
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 174
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 189
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 189
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 189
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 244
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 188
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 188
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 243
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 216
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 9/123 (7%)
Query: 25 DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLK 84
DL ++IRS ++ N V + S Q+ +G+ + +HRDL N ++D ++ T+K
Sbjct: 109 DLLQFIRSPQR---NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD-ESFTVK 164
Query: 85 IADLGLARAFT----LPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+AD GLAR ++++ H L + + A E L + ++T D+WS + EL+T
Sbjct: 165 VADFGLARDILDREYYSVQQHRHARLPVKWTALES-LQTYRFTTKSDVWSFGVLLWELLT 223
Query: 141 KTA 143
+ A
Sbjct: 224 RGA 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 208
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ E+M L +++S G P+ + Q+ +G+AF +HRDL+ N
Sbjct: 257 IYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 314
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVL-LGSTHYSTAVDMW 129
+L+ ++ KIAD GLAR + +YT + + APE + GS ++ D+W
Sbjct: 315 ILVS-ASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVW 369
Query: 130 SVACIFAELVTKTAL-FPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN-----WHEYPQ 183
S + E+VT + +PG S + + + R P + P L N W P+
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP--EELYNIMMRCWKNRPE 427
Query: 184 WNP 186
P
Sbjct: 428 ERP 430
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 216
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 201
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 256
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 88 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 147
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HR+L N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 148 NAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK 206
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 207 DGV-FTTSSDMWSFGVVLWEITS 228
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIP------VNTVKSLMYQLCKGVAFC 59
G +G+ L ++ DLK Y+RS R EN P + + + ++ G+A+
Sbjct: 87 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL 146
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ +HR+L N ++ T+KI D G+ R T +K +L + + APE L
Sbjct: 147 NAKKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLK 205
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T+ DMWS + E+ +
Sbjct: 206 DGV-FTTSSDMWSFGVVLWEITS 227
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 216
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 217 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 271
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EYM DL + ++ ++P + ++ + H G +HRD+KP N
Sbjct: 144 LYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 198
Query: 74 LLMDRKTMTLKIADLGLARAFTLP-IKKYTHEILTLWYRAPEVLL---GSTHYSTAVDMW 129
+L+D K+ LK+AD G + + + T Y +PEVL G +Y D W
Sbjct: 199 MLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 257
Query: 130 SVACIFAELVTKTALFPGDS 149
SV E++ F DS
Sbjct: 258 SVGVFLYEMLVGDTPFYADS 277
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 221
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFR 159
T Y PE + ++ + +WS+ + ++V F D E+ + FR
Sbjct: 222 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 276
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 41/216 (18%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 94 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 145
Query: 82 TLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+K+ D G++ I + +E + T Y +PE L G THYS D+WS+ E+
Sbjct: 146 EIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAV 201
Query: 141 KTALFPGDSELQQLLHIFRLLG-TPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKD 199
P + IF LL NE P L +AV +L+
Sbjct: 202 GRYPRPP-------MAIFELLDYIVNEP------------------PPKLPSAVFSLEFQ 236
Query: 200 GLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 235
D + + L +P++R K+ M H + D +
Sbjct: 237 --DFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 270
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 27/183 (14%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + + + F H + ++HR++K N+L+ ++K+ D G T K +
Sbjct: 119 IAAVCRECLQALEFLHSNQVIHRNIKSDNILLGMDG-SVKLTDFGFCAQITPEQSKRSTM 177
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ Y VD+WS+ + E++ + ++ L+ L++ GTP
Sbjct: 178 VGTPYWMAPEVVT-RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP 235
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
+ NP+ L+ D L + L+ D KR SAK+ ++H
Sbjct: 236 ELQ-----------------NPEKLSAIF-------RDFLNRCLEMDVEKRGSAKELIQH 271
Query: 225 PYF 227
+
Sbjct: 272 QFL 274
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 108
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 182 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 235
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 236 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R EN PV SL M Q+ G+A+
Sbjct: 82 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYL 141
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N + + T+KI D G+ R T +K +L + + +PE L
Sbjct: 142 NANKFVHRDLAARNCXV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 200
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 201 DGV-FTTYSDVWSFGVVLWEIAT 222
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ E+M L +++S G P+ + Q+ +G+AF +HRDL+ N
Sbjct: 84 IYIITEFMAKGSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN 141
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVL-LGSTHYSTAVDMW 129
+L+ ++ KIAD GLAR + +YT + + APE + GS ++ D+W
Sbjct: 142 ILVS-ASLVCKIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEAINFGS--FTIKSDVW 196
Query: 130 SVACIFAELVTKTAL-FPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMN-----WHEYPQ 183
S + E+VT + +PG S + + + R P + P L N W P+
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP--EELYNIMMRCWKNRPE 254
Query: 184 WNP 186
P
Sbjct: 255 ERP 257
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EYM DL + ++ ++P + ++ + H G +HRD+KP N
Sbjct: 149 LYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 74 LLMDRKTMTLKIADLGLARAFTLP-IKKYTHEILTLWYRAPEVLL---GSTHYSTAVDMW 129
+L+D K+ LK+AD G + + + T Y +PEVL G +Y D W
Sbjct: 204 MLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 130 SVACIFAELVTKTALFPGDS 149
SV E++ F DS
Sbjct: 263 SVGVFLYEMLVGDTPFYADS 282
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EYM DL + ++ ++P + ++ + H G +HRD+KP N
Sbjct: 149 LYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN 203
Query: 74 LLMDRKTMTLKIADLGLARAFTLP-IKKYTHEILTLWYRAPEVLL---GSTHYSTAVDMW 129
+L+D K+ LK+AD G + + + T Y +PEVL G +Y D W
Sbjct: 204 MLLD-KSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 262
Query: 130 SVACIFAELVTKTALFPGDS 149
SV E++ F DS
Sbjct: 263 SVGVFLYEMLVGDTPFYADS 282
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +K+AD G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IKVADFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 46 KSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI 105
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 113 RSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDFD 170
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 216
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 96/227 (42%), Gaps = 49/227 (21%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 103 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYT--HEILTLWYRAPEVL--LGSTHYS------- 123
L+ LK+ D G+A ++ T+ Y PE + + S+ +
Sbjct: 159 LI--VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKI 216
Query: 124 -TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNWH 179
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 217 SPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI----------- 259
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 260 EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 108
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 127 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTP 185
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 186 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 239
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 240 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 108
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKTLCGTP 181
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 182 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 235
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 236 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 271
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 18 VFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD 77
+F MD + S + + P K ++C + + H I++RDLKP N+L+D
Sbjct: 81 IFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD 140
Query: 78 RKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFA 136
K +KI D G A+ + T+ + T Y APEV + + Y+ ++D WS +
Sbjct: 141 -KNGHIKITDFGFAKY----VPDVTYXLCGTPDYIAPEV-VSTKPYNKSIDWWSFGILIY 194
Query: 137 ELVTKTALF 145
E++ F
Sbjct: 195 EMLAGYTPF 203
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 41/228 (17%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
L+ V E+++ DL +I+ R+ E + ++ + F H GI++RDLK N
Sbjct: 99 LFFVMEFVNGGDLMFHIQKSRRFDEA----RARFYAAEIISALMFLHDKGIIYRDLKLDN 154
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+L+D + K+AD G+ + T Y APE+ L Y AVD W++
Sbjct: 155 VLLDHEGHC-KLADFGMCKEGICNGVTTATFCGTPDYIAPEI-LQEMLYGPAVDWWAMGV 212
Query: 134 IFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAV 193
+ E++ A F ++E I N++V YP W
Sbjct: 213 LLYEMLCGHAPFEAENEDDLFEAIL------NDEVV-----------YPTW--------- 246
Query: 194 PNLDKDGLDLLEQMLQYDPSKRISA------KKAMEHPYFDDLDKTRL 235
L +D +L+ + +P+ R+ + + HP+F ++D +L
Sbjct: 247 --LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQL 292
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 51/228 (22%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
+Y+V E + DL +++ + +I KS + + V H HGI+H DLKP N
Sbjct: 131 IYMVMECGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 75 LMDRKTMTLKIADLGLARAF---TLPIKKYTHEILTLWYRAPEVL--LGSTHYS------ 123
L+ LK+ D G+A T + K + ++ + Y PE + + S+ +
Sbjct: 187 LI--VDGMLKLIDFGIANQMQPDTTSVVKDS-QVGAVNYMPPEAIKDMSSSRENGKSKSK 243
Query: 124 --TAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGT---PNEKVWPGVSSLMNW 178
D+WS+ CI + G + QQ+++ L PN ++
Sbjct: 244 ISPKSDVWSLGCILYYMTY------GKTPFQQIINQISKLHAIIDPNHEI---------- 287
Query: 179 HEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
E+P +P +KD D+L+ L+ DP +RIS + + HPY
Sbjct: 288 -EFPD---------IP--EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R N PV SL M Q+ G+A+
Sbjct: 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 154
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 155 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 213
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 214 DGV-FTTYSDVWSFGVVLWEIAT 235
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 108
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 145 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTP 203
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 204 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 257
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 258 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 293
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHRD 68
G L LV EY+ + S R + + L++ Q+C+G+A+ H +HRD
Sbjct: 106 GAASLQLVMEYVP------LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRD 159
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYST 124
L N+L+D + +KI D GLA+A + Y + WY APE L Y
Sbjct: 160 LAARNVLLDNDRL-VKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFY-Y 216
Query: 125 AVDMWSVACIFAELVT 140
A D+WS EL+T
Sbjct: 217 ASDVWSFGVTLYELLT 232
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 201
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +K+AD G A+ +K T + T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IKVADFGFAKR----VKGRTWXLCGTPE 204
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 72/159 (45%), Gaps = 29/159 (18%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGEN--IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
+Y+V EYM+ K + F + GE + + + + Q+ G+A+ +HRDL+
Sbjct: 78 IYIVTEYMN---KGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSA 134
Query: 73 NLLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTH 121
N+L+ + KIAD GLAR PIK + APE L
Sbjct: 135 NILVG-NGLICKIADFGLARLIEDNEXTARQGAKFPIK----------WTAPEAAL-YGR 182
Query: 122 YSTAVDMWSVACIFAELVTKTAL-FPGDSELQQLLHIFR 159
++ D+WS + ELVTK + +PG + + L + R
Sbjct: 183 FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER 221
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 108
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 147 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTP 205
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 206 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 259
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 260 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 295
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 201
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 202
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 202
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 201
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 202 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 248
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 202
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+S +Q+ + V CH G+LHRD+K N+L+D LK+ D G L YT
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG--SGALLKDTVYTDF 202
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSEL 151
T Y PE + ++ + +WS+ + ++V F D E+
Sbjct: 203 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI 249
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPH 72
T L++V EY I R + + + + +++ KG+ + H +HRD+K
Sbjct: 97 TDLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVA 132
N+L++ + K+AD G+A T + K I T ++ APEV + Y+ D+WS+
Sbjct: 155 NILLNTEGHA-KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV-IQEIGYNCVADIWSLG 212
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
E+ P +++ + IF + P P +
Sbjct: 213 ITAIEMAEGK---PPYADIHPMRAIFMIPTNP---------------------PPTFRK- 247
Query: 193 VPNLDKDGL-DLLEQMLQYDPSKRISAKKAMEHPY 226
P L D D ++Q L P +R +A + ++HP+
Sbjct: 248 -PELWSDNFTDFVKQCLVKSPEQRATATQLLQHPF 281
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 91 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 142
Query: 82 TLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-V 139
+K+ D G++ I + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 143 EIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAV 198
Query: 140 TKTALFPGDS--ELQQLLHIFRLL----GTPNEKVWPGVSSL 175
+ + P D+ + + + IF LL P K+ GV SL
Sbjct: 199 GRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 240
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 56/206 (27%)
Query: 43 NTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT 102
+T+ +++ ++ +G+ + H +G +HRD+K N+L+ +++IAD G++ AF T
Sbjct: 121 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-SVQIADFGVS-AFLATGGDIT 178
Query: 103 HE------ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH 156
+ T + APEV+ Y D+WS EL T A
Sbjct: 179 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA------------- 225
Query: 157 IFRLLGTPNEKVWPGVSSLMNWHEYP---------QWNPQSLATAVPNLD------KDGL 201
+H+YP Q +P SL T V + + K
Sbjct: 226 --------------------PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFR 265
Query: 202 DLLEQMLQYDPSKRISAKKAMEHPYF 227
++ LQ DP KR +A + + H +F
Sbjct: 266 KMISLCLQKDPEKRPTAAELLRHKFF 291
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 22/203 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTG------------ENIPVNTVKSLMYQLCKGVAFCHG 61
LY++ EY +L++Y+++ G E + + S YQ+ +G+ +
Sbjct: 109 LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 168
Query: 62 HGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGS 119
+HRDL N+L+ + +KIAD GLAR KK T+ L + + APE L
Sbjct: 169 KKCIHRDLAARNVLVTEDNV-MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR 227
Query: 120 THYSTAVDMWSVACIFAELVT-KTALFPG--DSELQQLLHIFRLLGTPNEKVWPGVSSLM 176
Y+ D+WS + E+ T + +PG EL +LL + P+ +
Sbjct: 228 I-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMR 286
Query: 177 N-WHEYPQWNPQSLATAVPNLDK 198
+ WH P P + V +LD+
Sbjct: 287 DCWHAVPSQRP-TFKQLVEDLDR 308
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 37/216 (17%)
Query: 12 RTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
R +YL+ EY +L K + Q ++M +L + +CHG ++HRD+K
Sbjct: 95 RRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIK 150
Query: 71 PHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
P NLL+ LKIAD G + P + TL Y PE++ G H + VD+W
Sbjct: 151 PENLLLG-LKGELKIADFGW--SVHAPSLRRKTMCGTLDYLPPEMIEGRMH-NEKVDLWC 206
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
+ + EL+ F S NE V + + P S+
Sbjct: 207 IGVLCYELLVGNPPFESASH--------------NETYRRIVKVDLKF-------PASVP 245
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
T DL+ ++L+++PS+R+ + HP+
Sbjct: 246 TG-------AQDLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTM-TLKIADLGLARAFTLPIKKYTHEILTLW 109
QL GV++CH I HRDLK N L+D LKI D G +++ L + + + T
Sbjct: 124 QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPA 182
Query: 110 YRAPEVLLGSTHYSTAVDMWSVA 132
Y APEVLL + D+WS
Sbjct: 183 YIAPEVLLRQEYDGKIADVWSCG 205
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 30/179 (16%)
Query: 49 MYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTL 108
+ Q+ G + H + ++HRDLK NL ++ + + +KI D GLA ++ T
Sbjct: 121 LRQIVLGCQYLHRNRVIHRDLKLGNLFLN-EDLEVKIGDFGLATKVEYDGERKKVLCGTP 179
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKV 168
Y APEVL H S VD+WS+ CI L+ F + L I + NE
Sbjct: 180 NYIAPEVLSKKGH-SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKK-----NEYS 233
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
P NP + + L+++MLQ DP+ R + + + +F
Sbjct: 234 IPK-----------HINPVAAS------------LIQKMLQTDPTARPTINELLNDEFF 269
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 10/143 (6%)
Query: 6 GQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSL--MYQL----CKGVAFC 59
G +G+ L ++ DLK Y+RS R N PV SL M Q+ G+A+
Sbjct: 85 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYL 144
Query: 60 HGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLL 117
+ + +HRDL N ++ + T+KI D G+ R T +K +L + + +PE L
Sbjct: 145 NANKFVHRDLAARNCMV-AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLK 203
Query: 118 GSTHYSTAVDMWSVACIFAELVT 140
++T D+WS + E+ T
Sbjct: 204 DGV-FTTYSDVWSFGVVLWEIAT 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 56/206 (27%)
Query: 43 NTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT 102
+T+ +++ ++ +G+ + H +G +HRD+K N+L+ +++IAD G++ AF T
Sbjct: 116 STIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG-SVQIADFGVS-AFLATGGDIT 173
Query: 103 HE------ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH 156
+ T + APEV+ Y D+WS EL T A
Sbjct: 174 RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA------------- 220
Query: 157 IFRLLGTPNEKVWPGVSSLMNWHEYP---------QWNPQSLATAVPNLD------KDGL 201
+H+YP Q +P SL T V + + K
Sbjct: 221 --------------------PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFR 260
Query: 202 DLLEQMLQYDPSKRISAKKAMEHPYF 227
++ LQ DP KR +A + + H +F
Sbjct: 261 KMISLCLQKDPEKRPTAAELLRHKFF 286
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT---------LPI 98
+ Q+ + V F H G++HRDLKP N+ + +K+ D GL A P+
Sbjct: 169 IFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV-VKVGDFGLVTAMDQDEEEQTVLTPM 227
Query: 99 KKY-TH--EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLL 155
Y TH ++ T Y +PE + G+ +YS VD++S+ I EL+ F E +++
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGN-NYSHKVDIFSLGLILFELLYS---FSTQMERVRII 283
Query: 156 HIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKR 215
R L P L+ +YPQ + +++ ML P++R
Sbjct: 284 TDVRNLKFP----------LLFTQKYPQEHM----------------MVQDMLSPSPTER 317
Query: 216 ISAKKAMEHPYFDDL 230
A +E+ F++L
Sbjct: 318 PEATDIIENAIFENL 332
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 110 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 161
Query: 82 TLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-VT 140
+K+ D G++ + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 162 EIKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 218
Query: 141 KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDG 200
+ + G + + ++ P K+ GV SL E+
Sbjct: 219 RYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSL----EFQ------------------ 256
Query: 201 LDLLEQMLQYDPSKRISAKKAMEHPYFDDLD 231
D + + L +P++R K+ M H + D
Sbjct: 257 -DFVNKCLIKNPAERADLKQLMVHAFIKRSD 286
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 33/233 (14%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 153 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 204
Query: 82 TLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-V 139
+K+ D G++ I + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 205 EIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAV 260
Query: 140 TKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWN-------------- 185
+ + P D++ +L+ ++ G E + Y +
Sbjct: 261 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 320
Query: 186 ---PQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYFDDLDKTRL 235
P L +AV +L+ D + + L +P++R K+ M H + D +
Sbjct: 321 NEPPPKLPSAVFSLEFQ--DFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEV 371
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 13/122 (10%)
Query: 36 TGENIPVNTVKSLMYQLCKGVAFCHGHGI---LHRDLKPHNLLM-------DRKTMTLKI 85
+G+ IP + + + Q+ +G+ + H I +HRDLK N+L+ D LKI
Sbjct: 98 SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI 157
Query: 86 ADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 145
D GLAR + K + APEV+ S +S D+WS + EL+T F
Sbjct: 158 TDFGLAREWHRTTKMSAAGAYA--WMAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPF 214
Query: 146 PG 147
G
Sbjct: 215 RG 216
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 32/182 (17%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTM-TLKIADLGLARAFTLPIKKYTHEILTLW 109
QL GV++CH + HRDLK N L+D LKI G +++ L + + + T
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS-TVGTPA 181
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKV 168
Y APEVLL + D+WS ++ F E + I R+L
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL------- 234
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++ A+P+ + + L+ ++ DP+KRIS + H
Sbjct: 235 -------------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHE 275
Query: 226 YF 227
+F
Sbjct: 276 WF 277
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EYM DL + ++ ++P K ++ + H G++HRD+KP N
Sbjct: 150 LYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN 204
Query: 74 LLMDRKTMTLKIADLGLA-RAFTLPIKKYTHEILTLWYRAPEVLL---GSTHYSTAVDMW 129
+L+D K LK+AD G + + + T Y +PEVL G +Y D W
Sbjct: 205 MLLD-KHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWW 263
Query: 130 SVACIFAELVTKTALFPGDS 149
SV E++ F DS
Sbjct: 264 SVGVFLFEMLVGDTPFYADS 283
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM+ L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 84 IYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAAN 141
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 142 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 197
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 198 FGILLTELTTKGRVPYPG 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 336 IYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 393
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 394 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 449
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 450 FGILLTELTTKGRVPYPG 467
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 118 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 169
Query: 82 TLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-VT 140
+K+ D G++ + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 170 EIKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 226
Query: 141 KTALFPGDSELQQLLHIFRLLGTPNE 166
+ + P D++ +L+ ++ G E
Sbjct: 227 RYPIPPPDAKELELMFGCQVEGDAAE 252
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 91 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 142
Query: 82 TLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-V 139
+K+ D G++ I + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 143 EIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAV 198
Query: 140 TKTALFPGDSELQQLLHIFRLLGTPNE 166
+ + P D++ +L+ ++ G E
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 91 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 142
Query: 82 TLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-V 139
+K+ D G++ I + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 143 EIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAV 198
Query: 140 TKTALFPGDSELQQLLHIFRLLGTPNE 166
+ + P D++ +L+ ++ G E
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 91 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 142
Query: 82 TLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-VT 140
+K+ D G++ + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 143 EIKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 199
Query: 141 KTALFPGDSELQQLLHIFRLLGTPNE 166
+ + P D++ +L+ ++ G E
Sbjct: 200 RYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 12/146 (8%)
Query: 22 MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
+D LKK R Q + + +K L Y K H I+HRD+KP N+L++ +
Sbjct: 91 LDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK-------HKIMHRDVKPSNILVNSRG- 142
Query: 82 TLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAEL-VT 140
+K+ D G++ + + T Y +PE L G THYS D+WS+ E+ V
Sbjct: 143 EIKLCDFGVSGQLIDSMANSF--VGTRSYMSPERLQG-THYSVQSDIWSMGLSLVEMAVG 199
Query: 141 KTALFPGDSELQQLLHIFRLLGTPNE 166
+ + P D++ +L+ ++ G E
Sbjct: 200 RYPIPPPDAKELELMFGCQVEGDAAE 225
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 80 IYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 137
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 138 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 193
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 194 FGILLTELTTKGRVPYPG 211
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 253 IYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 311 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 366
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 367 FGILLTELTTKGRVPYPG 384
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ LVFE+M+ L Y+R+ R T+ + +C+G+A+ ++HRDL N
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARN 133
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWS 130
L+ + +K++D G+ R F L +YT T + + +PEV + YS+ D+WS
Sbjct: 134 CLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS 189
Query: 131 VACIFAELVTK 141
+ E+ ++
Sbjct: 190 FGVLMWEVFSE 200
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 15/148 (10%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC-HGHGILHRDLKPH 72
+ + E+MD L + ++ ++ IP + + + +G+A+ H I+HRD+KP
Sbjct: 89 ISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPS 144
Query: 73 NLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSV 131
N+L++ + +K+ D G++ I + + T Y APE L G THYS D+WS+
Sbjct: 145 NILVNSRG-EIKLCDFGVSGQL---IDSMANSFVGTRSYMAPERLQG-THYSVQSDIWSM 199
Query: 132 ACIFAEL-VTKTALFPGDSELQQLLHIF 158
EL V + + P D+ ++L IF
Sbjct: 200 GLSLVELAVGRYPIPPPDA--KELEAIF 225
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 253 IYIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 311 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 366
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 367 FGILLTELTTKGRVPYPG 384
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 253 IYIVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 311 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 366
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 367 FGILLTELTTKGRVPYPG 384
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +K+ D GLA+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGLAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 32/182 (17%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTM-TLKIADLGLARAFTLPIKKYTHEILTLW 109
QL GV++CH + HRDLK N L+D LKI G +++ L + + T
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLH-SQPKDTVGTPA 181
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLH-IFRLLGTPNEKV 168
Y APEVLL + D+WS ++ F E + I R+L
Sbjct: 182 YIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRIL------- 234
Query: 169 WPGVSSLMNWHEYPQWNPQSLATAVPN---LDKDGLDLLEQMLQYDPSKRISAKKAMEHP 225
++ A+P+ + + L+ ++ DP+KRIS + H
Sbjct: 235 -------------------NVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRNHE 275
Query: 226 YF 227
+F
Sbjct: 276 WF 277
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 27/146 (18%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM+ L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 84 IYIVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAAN 141
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ + + K+AD GLAR PIK + APE L +
Sbjct: 142 ILVG-ENLVCKVADFGLARLIEDNEWTARQGAKFPIK----------WTAPEAAL-YGRF 189
Query: 123 STAVDMWSVACIFAELVTKTAL-FPG 147
+ D+WS + EL TK + +PG
Sbjct: 190 TIKSDVWSFGILLTELTTKGRVPYPG 215
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 15/139 (10%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + +G+A+ H H ++HRD+K N+L+ + +K+ D G A + P +
Sbjct: 156 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSA-SIMAPANXF--- 210
Query: 105 ILTLWYRAPEVLLG--STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 162
+ T ++ APEV+L Y VD+WS+ EL + + + L HI +
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ--- 267
Query: 163 TPNEKVWPGVSSLMNWHEY 181
NE P + S +W EY
Sbjct: 268 --NES--PALQS-GHWSEY 281
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 31/217 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH-GILHRDLKPHN 73
+++ E DT L K+ + G+ IP + + + + K + H ++HRD+KP N
Sbjct: 108 VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 167
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL---LGSTHYSTAVDMWS 130
+L++ +K D G++ + K + Y APE + L YS D+WS
Sbjct: 168 VLIN-ALGQVKXCDFGISGYLVDDVAKDI-DAGCKPYXAPERINPELNQKGYSVKSDIWS 225
Query: 131 VACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLA 190
+ EL FP DS GTP ++ L E P +PQ A
Sbjct: 226 LGITXIELA--ILRFPYDS-----------WGTPFQQ-------LKQVVEEP--SPQLPA 263
Query: 191 TAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ +D Q L+ + +R + + +HP+F
Sbjct: 264 D---KFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHRDLKP 71
LY V EY++ DL +I+ Q G+ +++ Y ++ G+ F H GI++RDLK
Sbjct: 95 LYFVMEYVNGGDLMYHIQ---QVGK---FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKL 148
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
N+++D + +KIAD G+ + + T Y APE+ + Y +VD W+
Sbjct: 149 DNVMLDSEG-HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEI-IAYQPYGKSVDWWAY 206
Query: 132 ACIFAELVTKTALFPGDSE 150
+ E++ F G+ E
Sbjct: 207 GVLLYEMLAGQPPFDGEDE 225
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
+G L LV EY+ + S R + + L++ Q+C+G+A+ H +HR
Sbjct: 88 QGEKSLQLVMEYVP------LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHR 141
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYS 123
+L N+L+D + +KI D GLA+A + Y + WY APE L Y
Sbjct: 142 NLAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFY- 198
Query: 124 TAVDMWSVACIFAELVT 140
A D+WS EL+T
Sbjct: 199 YASDVWSFGVTLYELLT 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ LVFE+M+ L Y+R+ R T+ + +C+G+A+ ++HRDL N
Sbjct: 80 ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 136
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWS 130
L+ + +K++D G+ R F L +YT T + + +PEV + YS+ D+WS
Sbjct: 137 CLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS 192
Query: 131 VACIFAELVTK 141
+ E+ ++
Sbjct: 193 FGVLMWEVFSE 203
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 39/217 (17%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
LY+VFE ++ + + + E+ + L KG+ + H I+HRD+KP NL
Sbjct: 113 LYMVFELVNQGPVMEVPTLKPLSED----QARFYFQDLIKGIEYLHYQKIIHRDIKPSNL 168
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHY--STAVDMWSVA 132
L+ +KIAD G++ F ++ + T + APE L + A+D+W++
Sbjct: 169 LVGEDG-HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG 227
Query: 133 CIFAELVTKTALFPGDSELQQLLHIFRLLGTP--NEKVWPGVSSLMNWH-EYPQWNPQSL 189
L+ F P +E++ S + + E+P
Sbjct: 228 VT--------------------LYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQ----- 262
Query: 190 ATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPY 226
P++ +D DL+ +ML +P RI + HP+
Sbjct: 263 ----PDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ ++ + +G+A+ H H ++HRD+K N+L+ + +K+ D G A + P +
Sbjct: 117 IAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL-VKLGDFGSA-SIMAPANXF--- 171
Query: 105 ILTLWYRAPEVLLG--STHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLG 162
+ T ++ APEV+L Y VD+WS+ EL + + + L HI
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----- 226
Query: 163 TPNEKVWPGVSSLMNWHEY 181
NE P + S +W EY
Sbjct: 227 AQNES--PALQS-GHWSEY 242
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM---TLKIADLG 89
F E++ + + Q+ GV + H I H DLKP N+++ K + +K+ D G
Sbjct: 98 FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
+A ++ + T + APE+ + DMWS+ I L++ + F G++
Sbjct: 158 IAHKIEAG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGET 215
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L +I + +E+ + S L D + ++L
Sbjct: 216 KQETLTNISAVNYDFDEEYFSNTSELAK------------------------DFIRRLLV 251
Query: 210 YDPSKRISAKKAMEHPY 226
DP +R++ +++EH +
Sbjct: 252 KDPKRRMTIAQSLEHSW 268
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ LVFE+M+ L Y+R+ R T+ + +C+G+A+ ++HRDL N
Sbjct: 77 ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 133
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWS 130
L+ + +K++D G+ R F L +YT T + + +PEV + YS+ D+WS
Sbjct: 134 CLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS 189
Query: 131 VACIFAELVTK 141
+ E+ ++
Sbjct: 190 FGVLMWEVFSE 200
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
+G L LV EY+ + S R + + L++ Q+C+G+A+ H +HR
Sbjct: 88 QGEKSLQLVMEYVP------LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHR 141
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYS 123
+L N+L+D + +KI D GLA+A + Y + WY APE L Y
Sbjct: 142 NLAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFY- 198
Query: 124 TAVDMWSVACIFAELVT 140
A D+WS EL+T
Sbjct: 199 YASDVWSFGVTLYELLT 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ LVFE+M+ L Y+R+ R T+ + +C+G+A+ ++HRDL N
Sbjct: 75 ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 131
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWS 130
L+ + +K++D G+ R F L +YT T + + +PEV + YS+ D+WS
Sbjct: 132 CLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS 187
Query: 131 VACIFAELVTK 141
+ E+ ++
Sbjct: 188 FGVLMWEVFSE 198
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 8 NKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHR 67
++ G V Y+V EY+ K R G+ +PV + + ++ +++ H G+++
Sbjct: 152 DRHGDPVGYIVMEYVGGQSLK-----RSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYN 206
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVD 127
DLKP N+++ + LK+ DLG I + + T ++APE++ T + A D
Sbjct: 207 DLKPENIMLTEE--QLKLIDLGAVSR----INSFGYLYGTPGFQAPEIV--RTGPTVATD 258
Query: 128 MWSVACIFAEL 138
+++V A L
Sbjct: 259 IYTVGRTLAAL 269
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ LVFE+M+ L Y+R+ R T+ + +C+G+A+ ++HRDL N
Sbjct: 97 ICLVFEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 153
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWS 130
L+ + +K++D G+ R F L +YT T + + +PEV + YS+ D+WS
Sbjct: 154 CLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS 209
Query: 131 VACIFAELVTK 141
+ E+ ++
Sbjct: 210 FGVLMWEVFSE 220
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L++V E+++ I + + E + ++ + + ++ H G++HRD+K ++
Sbjct: 146 LWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 201
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ +K++D G + + + + T ++ APE L+ Y VD+WS+ +
Sbjct: 202 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIM 259
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
E+V + + L+ + I + + P L N H+ P
Sbjct: 260 VIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK-----------VSP 298
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+L L+++L DP++R +A + ++HP+
Sbjct: 299 SLK----GFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L++V E+++ I + + E + ++ + + ++ H G++HRD+K ++
Sbjct: 103 LWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 158
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ +K++D G + + + + T ++ APE L+ Y VD+WS+ +
Sbjct: 159 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIM 216
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
E+V + + L+ + I + + P L N H+ P
Sbjct: 217 VIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK-----------VSP 255
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+L L+++L DP++R +A + ++HP+
Sbjct: 256 SLK----GFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L++V E+++ I + + E + ++ + + ++ H G++HRD+K ++
Sbjct: 101 LWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 156
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ +K++D G + + + + T ++ APE L+ Y VD+WS+ +
Sbjct: 157 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIM 214
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
E+V + + L+ + I + + P L N H+ P
Sbjct: 215 VIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK-----------VSP 253
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+L L+++L DP++R +A + ++HP+
Sbjct: 254 SLK----GFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 83/197 (42%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM---TLKIADLG 89
F E++ + + Q+ GV + H I H DLKP N+++ K + +K+ D G
Sbjct: 105 FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 164
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
+A ++ + T + APE+ + DMWS+ I L++ + F G++
Sbjct: 165 IAHKIEAG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGET 222
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L +I + +E+ + S L D + ++L
Sbjct: 223 KQETLTNISAVNYDFDEEYFSNTSELAK------------------------DFIRRLLV 258
Query: 210 YDPSKRISAKKAMEHPY 226
DP +R+ +++EH +
Sbjct: 259 KDPKRRMXIAQSLEHSW 275
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L++V E+++ I + + E + ++ + + ++ H G++HRD+K ++
Sbjct: 92 LWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 147
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ +K++D G + + + + T ++ APE L+ Y VD+WS+ +
Sbjct: 148 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIM 205
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
E+V + + L+ + I + + P L N H+ P
Sbjct: 206 VIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK-----------VSP 244
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+L L+++L DP++R +A + ++HP+
Sbjct: 245 SLK----GFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L++V E+++ I + + E + ++ + + ++ H G++HRD+K ++
Sbjct: 223 LWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 278
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ +K++D G + + + + T ++ APE L+ Y VD+WS+ +
Sbjct: 279 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIM 336
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
E+V + + L+ + I + + P L N H+ P
Sbjct: 337 VIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK-----------VSP 375
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+L L+++L DP++R +A + ++HP+
Sbjct: 376 SLK----GFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 87 IYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 145 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 201 FGILLTELTTKGRVPYPG 218
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T + T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLCGTPE 204
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 95/213 (44%), Gaps = 31/213 (14%)
Query: 15 LYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL 74
L++V E+++ I + + E + ++ + + ++ H G++HRD+K ++
Sbjct: 96 LWVVMEFLEGGALTDIVTHTRMNEE----QIAAVCLAVLQALSVLHAQGVIHRDIKSDSI 151
Query: 75 LMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACI 134
L+ +K++D G + + + + T ++ APE L+ Y VD+WS+ +
Sbjct: 152 LLTHDG-RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE-LISRLPYGPEVDIWSLGIM 209
Query: 135 FAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVP 194
E+V + + L+ + I + + P L N H+ P
Sbjct: 210 VIEMVDGEPPYFNEPPLKAMKMI-------RDNLPP---RLKNLHK-----------VSP 248
Query: 195 NLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+L L+++L DP++R +A + ++HP+
Sbjct: 249 SLK----GFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T + T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLCGTPE 204
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T + T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLCGTPE 204
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +K+ D G A+ +K T + T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IKVTDFGFAKR----VKGRTWXLCGTPE 204
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 83/197 (42%), Gaps = 29/197 (14%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM---TLKIADLG 89
F E++ + + Q+ GV + H I H DLKP N+++ K + +K+ D G
Sbjct: 119 FLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 178
Query: 90 LARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDS 149
+A ++ + T + APE+ + DMWS+ I L++ + F G++
Sbjct: 179 IAHKIEAG-NEFKNIFGTPEFVAPEI-VNYEPLGLEADMWSIGVITYILLSGASPFLGET 236
Query: 150 ELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQ 209
+ + L +I + +E+ + S L D + ++L
Sbjct: 237 KQETLTNISAVNYDFDEEYFSNTSELAK------------------------DFIRRLLV 272
Query: 210 YDPSKRISAKKAMEHPY 226
DP +R+ +++EH +
Sbjct: 273 KDPKRRMXIAQSLEHSW 289
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 108 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 164
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 165 LDEK-FTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 222
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 223 GVLLWELMTRGA 234
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TL 108
G+ F H + +HRD+K N+L+D + T KI+D GLARA +K+ ++ T
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARAS----EKFAQTVMXSRIVGTT 199
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
Y APE L G + D++S + E++T
Sbjct: 200 AYMAPEALRGEI--TPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TL 108
G+ F H + +HRD+K N+L+D + T KI+D GLARA +K+ ++ T
Sbjct: 145 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARAS----EKFAQTVMXXRIVGTT 199
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
Y APE L G + D++S + E++T
Sbjct: 200 AYMAPEALRGEI--TPKSDIYSFGVVLLEIIT 229
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFAEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
++ + Q+ + + F H I+HRDLK N+LM + +++AD G++ ++K
Sbjct: 119 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSF 177
Query: 105 ILTLWYRAPEVLLGSTH----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 160
I T ++ APEV++ T Y D+WS+ E+ + P EL + + ++
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ---IEPPHHELNPMRVLLKI 234
Query: 161 LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 220
+ +P +L T + D L+ L +P R SA +
Sbjct: 235 AKS---------------------DPPTLLTP-SKWSVEFRDFLKIALDKNPETRPSAAQ 272
Query: 221 AMEHPYFDDLDKTR 234
+EHP+ + +
Sbjct: 273 LLEHPFVSSITSNK 286
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM---YQLCKGVAFCHG---HGILHRDLK 70
LV EY + + + E +P T M Q +GVA+ H ++HRDLK
Sbjct: 77 LVMEYAEGG---SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 133
Query: 71 PHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
P NLL+ LKI D G A T+ + + APEV GS +YS D++S
Sbjct: 134 PPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVFEGS-NYSEKCDVFS 189
Query: 131 VACIFAELVTKTALF 145
I E++T+ F
Sbjct: 190 WGIILWEVITRRKPF 204
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 83/194 (42%), Gaps = 30/194 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
++ + Q+ + + F H I+HRDLK N+LM + +++AD G++ ++K
Sbjct: 111 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEG-DIRLADFGVSAKNLKTLQKRDSF 169
Query: 105 ILTLWYRAPEVLLGSTH----YSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRL 160
I T ++ APEV++ T Y D+WS+ E+ + P EL + + ++
Sbjct: 170 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ---IEPPHHELNPMRVLLKI 226
Query: 161 LGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKK 220
+ +P +L T + D L+ L +P R SA +
Sbjct: 227 AKS---------------------DPPTLLTP-SKWSVEFRDFLKIALDKNPETRPSAAQ 264
Query: 221 AMEHPYFDDLDKTR 234
+EHP+ + +
Sbjct: 265 LLEHPFVSSITSNK 278
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 173 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 226
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 227 VLIYEMAAGYPPFFADQPIQ 246
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 137 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 193 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 246
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 247 VLIYEMAAGYPPFFADQPIQ 266
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +++ D GLA+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGLAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 173 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 226
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 227 VLIYEMAAGYPPFFADQPIQ 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 13/135 (9%)
Query: 17 LVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM---YQLCKGVAFCHG---HGILHRDLK 70
LV EY + + + E +P T M Q +GVA+ H ++HRDLK
Sbjct: 76 LVMEYAEGG---SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 71 PHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
P NLL+ LKI D G A T+ + + APEV GS +YS D++S
Sbjct: 133 PPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVFEGS-NYSEKCDVFS 188
Query: 131 VACIFAELVTKTALF 145
I E++T+ F
Sbjct: 189 WGIILWEVITRRKPF 203
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 173 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 226
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 227 VLIYEMAAGYPPFFADQPIQ 246
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLXGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLAGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADEPIQ 245
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 109 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 164
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 165 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 218
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 219 VLIYEMAAGYPPFFADQPIQ 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 173 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 226
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 227 VLIYEMAAGYPPFFADQPIQ 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 102 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 157
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 158 LLIDQQGY-IQVTDFGFAKR----VKGRTWTLCGTPEYLAPEIIL-SKGYNKAVDWWALG 211
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 212 VLIYEMAAGYPPFFADQPIQ 231
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL------TL 108
G+ F H + +HRD+K N+L+D + T KI+D GLARA +K+ ++ T
Sbjct: 139 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARAS----EKFAQXVMXXRIVGTT 193
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
Y APE L G + D++S + E++T
Sbjct: 194 AYMAPEALRGEI--TPKSDIYSFGVVLLEIIT 223
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ F +HRDL N +
Sbjct: 110 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 166
Query: 76 MDRKTMTLKIADLGLARAFT----LPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 167 LDEK-FTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 224
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 225 GVLLWELMTRGA 236
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 198
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 199 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 240
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 29/182 (15%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
+ +++ ++ KG+ + H +HRD+K N+L+ + +K+AD G+A T K
Sbjct: 118 IATILREILKGLDYLHSERKIHRDIKAANVLLSEQG-DVKLADFGVAGQLTDTQIKRNXF 176
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTP 164
+ T ++ APEV+ S Y D+WS+ EL P +S+L + +F +
Sbjct: 177 VGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGE---PPNSDLHPMRVLFLI---- 228
Query: 165 NEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH 224
P+ +P +L K + +E L DP R +AK+ ++H
Sbjct: 229 -----------------PKNSPPTLEG---QHSKPFKEFVEACLNKDPRFRPTAKELLKH 268
Query: 225 PY 226
+
Sbjct: 269 KF 270
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 117 LYMVMEYVPGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 173 LLIDQQGY-IQVTDFGFAKR----VKGRTWTLCGTPEYLAPEIIL-SKGYNKAVDWWALG 226
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 227 VLIYEMAAGYPPFFADQPIQ 246
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 117 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 172
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 173 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 226
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 227 VLIYEMAAGYPPFFADQPIQ 246
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 196
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 197 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 137 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 192
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 193 LLIDQQGY-IQVTDFGFAKR----VKGATWTLCGTPEYLAPEIIL-SKGYNKAVDWWALG 246
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 247 VLIYEMAAGYPPFFADQPIQ 266
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 87 IYIVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 145 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 201 FGILLTELTTKGRVPYPG 218
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 29/168 (17%)
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH-- 121
I+HRD+KP N+L+DR + +K+ D G++ I K T + Y APE + S
Sbjct: 147 IIHRDIKPSNILLDR-SGNIKLCDFGISGQLVDSIAK-TRDAGCRPYMAPERIDPSASRQ 204
Query: 122 -YSTAVDMWSVACIFAELVTKTALFPG-DSELQQLLHIFRLLGTPNEKVWPGVSSLMNWH 179
Y D+WS+ EL T +P +S QL + + G P
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVK--GDP--------------- 247
Query: 180 EYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
PQ + P+ ++ + L D SKR K+ ++HP+
Sbjct: 248 --PQLSNSEEREFSPSF----INFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 204
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 205 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 246
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNL---------LMDRKT 80
I + G + + + L+ +C+G+ H G HRDLKP N+ LMD +
Sbjct: 121 IERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS 180
Query: 81 MTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH--YSTAVDMWSVACI---- 134
M + +R L ++ + + T+ YRAPE+ +H D+WS+ C+
Sbjct: 181 MNQACIHVEGSRQ-ALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAM 239
Query: 135 -FAELVTKTALFPGDS 149
F E GDS
Sbjct: 240 MFGEGPYDMVFQKGDS 255
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ F +HRDL N +
Sbjct: 109 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 165
Query: 76 MDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+D K T+K+AD GLAR F K ++ W L + ++T D+WS
Sbjct: 166 LDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWS 222
Query: 131 VACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 223 FGVLLWELMTRGA 235
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ F +HRDL N +
Sbjct: 110 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 166
Query: 76 MDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+D K T+K+AD GLAR F K ++ W L + ++T D+WS
Sbjct: 167 LDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWS 223
Query: 131 VACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 224 FGVLLWELMTRGA 236
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ F +HRDL N +
Sbjct: 168 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 224
Query: 76 MDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+D K T+K+AD GLAR F K ++ W L + ++T D+WS
Sbjct: 225 LDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWS 281
Query: 131 VACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 282 FGVLLWELMTRGA 294
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
L+ V EY++ DL +++ R+ +P + ++ + + H GI++RDLK N
Sbjct: 85 LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 140
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+L+D + +K+ D G+ + P + T Y APE+L G Y +VD W++
Sbjct: 141 VLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-YGFSVDWWALGV 198
Query: 134 IFAELVTKTALF 145
+ E++ + F
Sbjct: 199 LMFEMMAGRSPF 210
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ F +HRDL N +
Sbjct: 109 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 165
Query: 76 MDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+D K T+K+AD GLAR F K ++ W L + ++T D+WS
Sbjct: 166 LDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWS 222
Query: 131 VACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 223 FGVLLWELMTRGA 235
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ F +HRDL N +
Sbjct: 114 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 170
Query: 76 MDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+D K T+K+AD GLAR F K ++ W L + ++T D+WS
Sbjct: 171 LDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWS 227
Query: 131 VACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 228 FGVLLWELMTRGA 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 12/133 (9%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ F +HRDL N +
Sbjct: 107 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCM 163
Query: 76 MDRKTMTLKIADLGLAR-----AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWS 130
+D K T+K+AD GLAR F K ++ W L + ++T D+WS
Sbjct: 164 LDEK-FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES--LQTQKFTTKSDVWS 220
Query: 131 VACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 221 FGVLLWELMTRGA 233
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 224
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 225 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 266
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 87 IYIVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 145 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 201 FGILLTELTTKGRVPYPG 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 27/146 (18%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 87 IYIVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ + + K+AD GLAR PIK + APE L +
Sbjct: 145 ILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIK----------WTAPEAAL-YGRF 192
Query: 123 STAVDMWSVACIFAELVTKTAL-FPG 147
+ D+WS + EL TK + +PG
Sbjct: 193 TIKSDVWSFGILLTELTTKGRVPYPG 218
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NLL+D++ +++ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 127 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 183
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 184 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 241
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 242 GVLLWELMTRGA 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 103 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 158
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D + +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 159 LLIDEQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 212
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 213 VLIYEMAAGYPPFFADQPIQ 232
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHEILTLWYRAPEVLLGSTHYST 124
HRD+KP N+L+ + D G+A A T + + + + TL+Y APE +H +
Sbjct: 157 HRDVKPENILVSADDFAY-LVDFGIASATTDEKLTQLGNTVGTLYYXAPE-RFSESHATY 214
Query: 125 AVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGV 172
D++++ C+ E +T + + GD HI + + P+ V PG+
Sbjct: 215 RADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPS-TVRPGI 261
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
L+ V EY++ DL +++ R+ +P + ++ + + H GI++RDLK N
Sbjct: 81 LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 136
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+L+D + +K+ D G+ + P + T Y APE+L G Y +VD W++
Sbjct: 137 VLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-YGFSVDWWALGV 194
Query: 134 IFAELVTKTALF 145
+ E++ + F
Sbjct: 195 LMFEMMAGRSPF 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 109 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 165
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 166 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 223
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 224 GVLLWELMTRGA 235
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA---FTLPIKKYTHEILTLWYR 111
G+ F H + +HRD+K N+L+D + T KI+D GLARA F + + + T Y
Sbjct: 136 GINFLHENHHIHRDIKSANILLD-EAFTAKISDFGLARASEKFAQXVXX-SRIVGTTAYX 193
Query: 112 APEVLLGSTHYSTAVDMWSVACIFAELVT 140
APE L G + D++S + E++T
Sbjct: 194 APEALRGEI--TPKSDIYSFGVVLLEIIT 220
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 38 ENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP 97
E IPV+ V L++Q+ G+ + +HRDL N+L+ + KI+D GL++A
Sbjct: 105 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA-KISDFGLSKALGAD 163
Query: 98 IKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
YT W + APE + +S+ D+WS E ++
Sbjct: 164 DSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 78 IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 135
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 136 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 191
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 192 FGILLTELTTKGRVPYPG 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 76 IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 133
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 134 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 189
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 190 FGILLTELTTKGRVPYPG 207
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 107 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 163
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 164 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 221
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 222 GVLLWELMTRGA 233
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 87 IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 145 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 201 FGILLTELTTKGRVPYPG 218
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 87 IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 145 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 201 FGILLTELTTKGRVPYPG 218
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 106 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 162
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 163 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 220
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 221 GVLLWELMTRGA 232
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 101 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 157
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 158 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 215
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 216 GVLLWELMTRGA 227
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 128 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 184
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 185 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 242
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 243 GVLLWELMTRGA 254
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 104 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 160
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 161 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 218
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 219 GVLLWELMTRGA 230
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 105
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIKNDSNYVV 226
Query: 106 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 155
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 227 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 156 HIFRLL 161
FR+L
Sbjct: 286 EGFRML 291
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 109 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 165
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 166 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 223
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 224 GVLLWELMTRGA 235
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLA-------------RA 93
S + G+A+ H I+HRDL HN L+ R+ + +AD GLA R+
Sbjct: 112 SFAKDIASGMAYLHSMNIIHRDLNSHNCLV-RENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 94 FTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFP 146
P +K + ++ ++ APE++ G + Y VD++S + E++ + P
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADP 223
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 83/223 (37%), Gaps = 54/223 (24%)
Query: 11 GRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
GR L +V E +D + + R + + +M + + + + H I HRD+K
Sbjct: 86 GRKCLLIVMECLDGG-ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 71 PHNLLM--DRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDM 128
P NLL R LK+ D G A+ T Y + DM
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETT-----------------------GEKYDKSCDM 181
Query: 129 WSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEY----PQW 184
WS+ I L+ F + L + PG+ + + +Y P+W
Sbjct: 182 WSLGVIMYILLCGYPPFYSNHGL---------------AISPGMKTRIRMGQYEFPNPEW 226
Query: 185 NPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAKKAMEHPYF 227
+ S + L+ +L+ +P++R++ + M HP+
Sbjct: 227 SEVSEEVKM---------LIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 17 LVFEYMD-TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLL 75
+V YM DL+ +IR+ N V + Q+ KG+ + +HRDL N +
Sbjct: 108 VVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCM 164
Query: 76 MDRKTMTLKIADLGLARAF----TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
+D K T+K+AD GLAR + T L + + A E L + ++T D+WS
Sbjct: 165 LDEK-FTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES-LQTQKFTTKSDVWSF 222
Query: 132 ACIFAELVTKTA 143
+ EL+T+ A
Sbjct: 223 GVLLWELMTRGA 234
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
L+ V EY++ DL +++ R+ +P + ++ + + H GI++RDLK N
Sbjct: 96 LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 151
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+L+D + +K+ D G+ + P + T Y APE+L G Y +VD W++
Sbjct: 152 VLLDSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-YGFSVDWWALGV 209
Query: 134 IFAELVTKTALF 145
+ E++ + F
Sbjct: 210 LMFEMMAGRSPF 221
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 105
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIKNDSNYVV 221
Query: 106 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 155
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 222 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 280
Query: 156 HIFRLL 161
FR+L
Sbjct: 281 EGFRML 286
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
+G + LV EY+ + S R V + L++ Q+C+G+A+ H +HR
Sbjct: 83 QGEKSVQLVMEYVP------LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 136
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYS 123
L N+L+D + +KI D GLA+A + Y + WY APE L Y
Sbjct: 137 ALAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFY- 193
Query: 124 TAVDMWSVACIFAELVT 140
A D+WS EL+T
Sbjct: 194 YASDVWSFGVTLYELLT 210
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
L+ V EY++ DL +++ R+ +P + ++ + + H GI++RDLK N
Sbjct: 128 LFFVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 183
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+L+D + +K+ D G+ + P + T Y APE+L G Y +VD W++
Sbjct: 184 VLLDSEG-HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-YGFSVDWWALGV 241
Query: 134 IFAELVTKTALF 145
+ E++ + F
Sbjct: 242 LMFEMMAGRSPF 253
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 10 EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMY--QLCKGVAFCHGHGILHR 67
+G + LV EY+ + S R V + L++ Q+C+G+A+ H +HR
Sbjct: 82 QGEKSVQLVMEYVP------LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHR 135
Query: 68 DLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT----HEILTLWYRAPEVLLGSTHYS 123
L N+L+D + +KI D GLA+A + Y + WY APE L Y
Sbjct: 136 ALAARNVLLDNDRL-VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKECKFY- 192
Query: 124 TAVDMWSVACIFAELVT 140
A D+WS EL+T
Sbjct: 193 YASDVWSFGVTLYELLT 209
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 105
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIKNDSNYVV 219
Query: 106 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 155
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 220 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 278
Query: 156 HIFRLL 161
FR+L
Sbjct: 279 EGFRML 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 38 ENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTL 96
E I + + S +Q+ +G+ F +HRDL N+L+ + +KI D GLAR +
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNV-VKICDFGLARDIYKN 252
Query: 97 P--IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSE 150
P ++K + W APE + YST D+WS + E+ + + +PG D +
Sbjct: 253 PDYVRKGDTRLPLKWM-APESIFDKI-YSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDED 310
Query: 151 LQQLLHIFRLLGTPNEKVWPGVSSLM--NWHEYPQWNPQ 187
L + P E P + +M WH P+ P+
Sbjct: 311 FCSRLREGMRMRAP-EYSTPEIYQIMLDCWHRDPKERPR 348
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 105
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLARH----IKNDSNYVV 226
Query: 106 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 155
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 227 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 285
Query: 156 HIFRLL 161
FR+L
Sbjct: 286 EGFRML 291
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 69/138 (50%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 87 IYIVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 145 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 201 FGILLTELTTKGRVPYPG 218
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLW 109
Q+ + H +++RDLKP NL++D++ +++ D G A+ +K T + T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPE 203
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQ 152
Y APE++L S Y+ AVD W++ + E+ F D +Q
Sbjct: 204 YLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 6/127 (4%)
Query: 25 DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLK 84
DL YI GE + Q+ + CH G++HRD+K N+L+D + K
Sbjct: 125 DLFDYITEKGPLGEG----PSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK 180
Query: 85 IADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL 144
+ D G L + YT T Y PE + +++ +WS+ + ++V
Sbjct: 181 LIDFG--SGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
Query: 145 FPGDSEL 151
F D E+
Sbjct: 239 FERDQEI 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEI- 105
S YQ+ KG+AF +HRDL N+L+ +T KI D GLAR IK ++ +
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT-KICDFGLAR----DIKNDSNYVV 203
Query: 106 -----LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPG---DSELQQLL- 155
L + + APE + Y+ D+WS EL + ++ +PG DS+ +++
Sbjct: 204 KGNARLPVKWMAPESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK 262
Query: 156 HIFRLL 161
FR+L
Sbjct: 263 EGFRML 268
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ EYM L +++S G + + + Q+ +G+A+ +HRDL+ N
Sbjct: 83 IYIITEYMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAAN 140
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ M KIAD GLAR + +YT + + APE + ++ D+WS
Sbjct: 141 VLVSESLMC-KIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEA-INFGCFTIKSDVWS 196
Query: 131 VACIFAELVTKTAL-FPGDSE------LQQLLHIFRLLGTPNE 166
+ E+VT + +PG + L Q + R+ P+E
Sbjct: 197 FGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDE 239
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ ++ F D +Q
Sbjct: 226 VLIYQMAAGYPPFFADQPIQ 245
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
L++D++ +++ D G A+ +K T + T Y APE+++ S Y+ AVD W++
Sbjct: 172 LIIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPEIII-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 47 SLMYQLCKGVAFCHGHG--ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
S+ Y + KG+ + H I+HRDLK NLL+D+K T+K+ D GL+R
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKK-YTVKVCDFGLSRLKASXFLXSKXA 199
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
T + APEVL + D++S I EL T
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL N
Sbjct: 87 IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAAN 144
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GLAR + +YT + + APE L ++ D+WS
Sbjct: 145 ILVG-ENLVCKVADFGLAR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 200
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 201 FGILLTELTTKGRVPYPG 218
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY V EY++ DL +I+ + E V ++ G+ F GI++RDLK N
Sbjct: 96 LYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA----EIAIGLFFLQSKGIIYRDLKLDN 151
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+++D + +KIAD G+ + T Y APE+ + Y +VD W+
Sbjct: 152 VMLDSEG-HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI-IAYQPYGKSVDWWAFGV 209
Query: 134 IFAELVTKTALFPGDSE 150
+ E++ A F G+ E
Sbjct: 210 LLYEMLAGQAPFEGEDE 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 26/200 (13%)
Query: 8 NKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLM-------------YQLCK 54
K G ++ +V +L Y+RS R E +P T + L +Q+ K
Sbjct: 102 TKPGGPLMVIVEFCKFGNLSTYLRSKRN--EFVPYKTPEDLYKDFLTLEHLICYSFQVAK 159
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHEILTLWYR 111
G+ F +HRDL N+L+ K + +KI D GLAR ++K + W
Sbjct: 160 GMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLPLKWM- 217
Query: 112 APEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLGTPNEK 167
APE + Y+ D+WS + E+ + A +PG D E + L + P+
Sbjct: 218 APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 276
Query: 168 VWPGVSSLMN-WHEYPQWNP 186
++++ WH P P
Sbjct: 277 TPEMYQTMLDCWHGEPSQRP 296
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y+V EYM L +++ + G+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 254 IYIVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 311
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ + + K+AD GL R + +YT + + APE L ++ D+WS
Sbjct: 312 ILVG-ENLVCKVADFGLGR--LIEDNEYTARQGAKFPIKWTAPEAAL-YGRFTIKSDVWS 367
Query: 131 VACIFAELVTKTAL-FPG 147
+ EL TK + +PG
Sbjct: 368 FGILLTELTTKGRVPYPG 385
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY V EY++ DL +I+ + E V ++ G+ F GI++RDLK N
Sbjct: 417 LYFVMEYVNGGDLMYHIQQVGRFKEPHAV----FYAAEIAIGLFFLQSKGIIYRDLKLDN 472
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVAC 133
+++D + +KIAD G+ + T Y APE+ + Y +VD W+
Sbjct: 473 VMLDSEGH-IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEI-IAYQPYGKSVDWWAFGV 530
Query: 134 IFAELVTKTALFPGDSE 150
+ E++ A F G+ E
Sbjct: 531 LLYEMLAGQAPFEGEDE 547
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H +++RD+K NL++D K +KI D GL + T Y
Sbjct: 118 EIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEY 176
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVW 169
APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 177 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI-------- 222
Query: 170 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEH 224
LM +P+ L + LL +L+ DP +R+ AK+ MEH
Sbjct: 223 -----LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 266
Query: 225 PYF 227
+F
Sbjct: 267 RFF 269
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H +++RD+K NL++D K +KI D GL + T Y
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVW 169
APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 172 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI-------- 217
Query: 170 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEH 224
LM +P+ L + LL +L+ DP +R+ AK+ MEH
Sbjct: 218 -----LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 225 PYF 227
+F
Sbjct: 262 RFF 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 27/146 (18%)
Query: 15 LYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM L +++ +TG+ + + + + Q+ G+A+ +HRDL+ N
Sbjct: 77 IXIVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 134
Query: 74 LLMDRKTMTLKIADLGLAR-----------AFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
+L+ + + K+AD GLAR PIK + APE L +
Sbjct: 135 ILVG-ENLVCKVADFGLARLIEDNEXTARQGAKFPIK----------WTAPEAAL-YGRF 182
Query: 123 STAVDMWSVACIFAELVTKTAL-FPG 147
+ D+WS + EL TK + +PG
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVPYPG 208
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 26/149 (17%)
Query: 15 LYLVFEYMD-TDLKKYIRSFRQ----------------TGENIPVNTVKSLM---YQLCK 54
+YL+FEY DL Y+RS R+ E++ V T + L+ YQ+ K
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 55 GVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYT---HEILTLWYR 111
G+ F +HRDL N+L+ + +KI D GLAR + Y + L + +
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKV-VKICDFGLARD-IMSDSNYVVRGNARLPVKWM 241
Query: 112 APEVLLGSTHYSTAVDMWSVACIFAELVT 140
APE L Y+ D+WS + E+ +
Sbjct: 242 APESLFEGI-YTIKSDVWSYGILLWEIFS 269
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H +++RD+K NL++D K +KI D GL + T Y
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVW 169
APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 172 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI-------- 217
Query: 170 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEH 224
LM +P+ L + LL +L+ DP +R+ AK+ MEH
Sbjct: 218 -----LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 225 PYF 227
+F
Sbjct: 262 RFF 264
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T Y AP ++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEYLAPAIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 25 DLKKYIRSFRQTGENIPVN-------TVKSLM---YQLCKGVAFCHGHGILHRDLKPHNL 74
+L Y+RS R E +P T++ L+ +Q+ KG+ F +HRDL N+
Sbjct: 118 NLSTYLRSKRN--EFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNI 175
Query: 75 LMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
L+ K + +KI D GLAR + P ++K + W APE + Y+ D+WS
Sbjct: 176 LLSEKNV-VKIXDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSF 232
Query: 132 ACIFAELVTKTAL-FPG---DSELQQLLHIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNP 186
+ E+ + A +PG D E + L + P+ ++++ WH P P
Sbjct: 233 GVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 3 VKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH 62
V+ Q E +LYL E L+++ ++ G ++P V + +A H
Sbjct: 120 VRLEQAWEEGGILYLQTELCGPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQ 176
Query: 63 GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHY 122
G++H D+KP N+ + + K+ D GL E Y APE+L GS Y
Sbjct: 177 GLVHLDVKPANIFLGPRGRC-KLGDFGLLVELGTAGAGEVQEG-DPRYMAPELLQGS--Y 232
Query: 123 STAVDMWSVACIFAELVTKTALFPGDSELQQL 154
TA D++S+ E+ L G QQL
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 11/131 (8%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ LV E+M+ L Y+R+ R T+ + +C+G+A+ ++HRDL N
Sbjct: 78 ICLVTEFMEHGCLSDYLRTQRGL---FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN 134
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWS 130
L+ + +K++D G+ R F L +YT T + + +PEV + YS+ D+WS
Sbjct: 135 CLVG-ENQVIKVSDFGMTR-FVLD-DQYTSSTGTKFPVKWASPEV-FSFSRYSSKSDVWS 190
Query: 131 VACIFAELVTK 141
+ E+ ++
Sbjct: 191 FGVLMWEVFSE 201
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H +++RD+K NL++D K +KI D GL + T Y
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKXFCGTPEY 171
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVW 169
APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 172 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI-------- 217
Query: 170 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEH 224
LM +P+ L + LL +L+ DP +R+ AK+ MEH
Sbjct: 218 -----LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 225 PYF 227
+F
Sbjct: 262 RFF 264
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 264 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 321
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 322 APDYTTPEMYQTMLDCWHGEPSQRP 346
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 26/162 (16%)
Query: 4 KQGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAF---- 58
K+G N E L+L+ + D L Y++ G I N + + + +G+++
Sbjct: 79 KRGSNLE--VELWLITAFHDKGSLTDYLK-----GNIITWNELCHVAETMSRGLSYLHED 131
Query: 59 ---CHGHG----ILHRDLKPHNLLMDRKTMTLKIADLGLARAFT--LPIKKYTHEILTLW 109
C G G I HRD K N+L+ + +T +AD GLA F P ++ T
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLL-KSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR 190
Query: 110 YRAPEVLLGSTHYST----AVDMWSVACIFAELVTKTALFPG 147
Y APEVL G+ ++ +DM+++ + ELV++ G
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADG 232
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 207 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 266 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 323
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 324 APDYTTPEMYQTMLDCWHGEPSQRP 348
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H +++RD+K NL++D K +KI D GL + T Y
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVW 169
APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 172 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI-------- 217
Query: 170 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEH 224
LM +P+ L + LL +L+ DP +R+ AK+ MEH
Sbjct: 218 -----LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 225 PYF 227
+F
Sbjct: 262 RFF 264
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H +++RD+K NL++D K +KI D GL + T Y
Sbjct: 116 EIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCGTPEY 174
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVW 169
APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 175 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI-------- 220
Query: 170 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEH 224
LM +P+ L + LL +L+ DP +R+ AK+ MEH
Sbjct: 221 -----LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 264
Query: 225 PYF 227
+F
Sbjct: 265 RFF 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 37/183 (20%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H +++RD+K NL++D K +KI D GL + T Y
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLD-KDGHIKITDFGLCKEGISDGATMKTFCGTPEY 171
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVW 169
APEV L Y AVD W + + E++ + + D E +F L+
Sbjct: 172 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELI-------- 217
Query: 170 PGVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEH 224
LM +P+ L + LL +L+ DP +R+ AK+ MEH
Sbjct: 218 -----LMEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261
Query: 225 PYF 227
+F
Sbjct: 262 RFF 264
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 259 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 316
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 317 APDYTTPEMYQTMLDCWHGEPSQRP 341
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 257 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 314
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 315 APDYTTPEMYQTMLDCWHGEPSQRP 339
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 47 SLMYQLCKGVAFCHGHG--ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
S+ Y + KG+ + H I+HR+LK NLL+D+K T+K+ D GL+R
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKK-YTVKVCDFGLSRLKASTFLSSKSA 199
Query: 105 ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
T + APEVL + D++S I EL T
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKS-DVYSFGVILWELAT 234
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 38 ENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP 97
E IPV+ V L++Q+ G+ + +HR+L N+L+ + KI+D GL++A
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYA-KISDFGLSKALGAD 489
Query: 98 IKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
YT W + APE + +S+ D+WS E ++
Sbjct: 490 DSYYTARSAGKWPLKWYAPEC-INFRKFSSRSDVWSYGVTMWEALS 534
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + T+KI D GLA + + E L+
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATVKSRWSGSHQFEQLSGSI 174
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ S YS D+++ + EL+T
Sbjct: 175 LWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+Y++ E+M L +++S G + + + Q+ +G+A+ +HRDL+ N
Sbjct: 82 IYIITEFMAKGSLLDFLKS--DEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAAN 139
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHE---ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L+ M KIAD GLAR + +YT + + APE + ++ ++WS
Sbjct: 140 VLVSESLMC-KIADFGLAR--VIEDNEYTAREGAKFPIKWTAPEA-INFGCFTIKSNVWS 195
Query: 131 VACIFAELVTKTAL-FPGD------SELQQLLHIFRLLGTPNE 166
+ E+VT + +PG S L Q + R+ P+E
Sbjct: 196 FGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDE 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 23/180 (12%)
Query: 25 DLKKYIRSFRQTGENIPVN-------TVKSLM---YQLCKGVAFCHGHGILHRDLKPHNL 74
+L Y+RS R E +P T++ L+ +Q+ KG+ F +HRDL N+
Sbjct: 118 NLSTYLRSKRN--EFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNI 175
Query: 75 LMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSV 131
L+ K + +KI D GLAR + P ++K + W APE + Y+ D+WS
Sbjct: 176 LLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLPLKWM-APETIFDRV-YTIQSDVWSF 232
Query: 132 ACIFAELVTKTAL-FPG---DSELQQLLHIFRLLGTPNEKVWPGVSSLMN-WHEYPQWNP 186
+ E+ + A +PG D E + L + P+ ++++ WH P P
Sbjct: 233 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 107
+ Q +G+ + H I+HRDLK +N+ + T+KI D GLA + + E L+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 108 ---LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHI 157
LW APEV+ S YS D+++ + EL+T + + Q++ +
Sbjct: 184 GSILWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 12/140 (8%)
Query: 15 LYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LY+V EY+ ++ ++R + E + Q+ + H +++RDLKP N
Sbjct: 116 LYMVMEYVAGGEMFSHLRRIGRFSEP----HARFYAAQIVLTFEYLHSLDLIYRDLKPEN 171
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TLWYRAPEVLLGSTHYSTAVDMWSVA 132
LL+D++ +++ D G A+ +K T + T APE++L S Y+ AVD W++
Sbjct: 172 LLIDQQGY-IQVTDFGFAKR----VKGRTWXLCGTPEALAPEIIL-SKGYNKAVDWWALG 225
Query: 133 CIFAELVTKTALFPGDSELQ 152
+ E+ F D +Q
Sbjct: 226 VLIYEMAAGYPPFFADQPIQ 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 216 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 273
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 274 APDYTTPEMYQTMLDCWHGEPSQRP 298
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 205 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEI 105
L+ Q+ G+ + H ++H+DL N+L+ K + +KI+DLGL R K + +
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-LNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFP----GDSELQQLLHIFRLL 161
L + + APE ++ +S D+WS + E V L P + ++ +++ ++L
Sbjct: 192 LPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWE-VFSYGLQPYCGYSNQDVVEMIRNRQVL 249
Query: 162 GTPNE-KVWPGVSSLMNWHEYPQWNPQ 187
P++ W + W+E+P P+
Sbjct: 250 PCPDDCPAWVYALMIECWNEFPSRRPR 276
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEI 105
L+ Q+ G+ + H ++H+DL N+L+ K + +KI+DLGL R K + +
Sbjct: 150 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDK-LNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 106 LTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFP----GDSELQQLLHIFRLL 161
L + + APE ++ +S D+WS + E V L P + ++ +++ ++L
Sbjct: 209 LPIRWMAPEAIMYGK-FSIDSDIWSYGVVLWE-VFSYGLQPYCGYSNQDVVEMIRNRQVL 266
Query: 162 GTPNE-KVWPGVSSLMNWHEYPQWNPQ 187
P++ W + W+E+P P+
Sbjct: 267 PCPDDCPAWVYALMIECWNEFPSRRPR 293
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K +
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 107
+ Q +G+ + H I+HRDLK +N+ + T+KI D GLA + + E L+
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN-TVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 108 ---LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ S YS D+++ + EL+T
Sbjct: 184 GSILWM-APEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 214 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 251 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 308
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRP 333
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-AFTLP--IKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR + P ++K +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 205 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 205 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 73/167 (43%), Gaps = 18/167 (10%)
Query: 2 DVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHG 61
+ + ++ G+ L+ E L ++++ G + +TV + YQ C+ V H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP-LSCDTVLKIFYQTCRAVQHMHR 154
Query: 62 HG--ILHRDLKPHNLLMDRKTMTLKIADLGLARAFT------------LPIKKYTHEILT 107
I+HRDLK NLL+ + T+K+ D G A + +++ T
Sbjct: 155 QKPPIIHRDLKVENLLLSNQG-TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 108 LWYRAPEVLLGSTHYSTA--VDMWSVACIFAELVTKTALFPGDSELQ 152
YR PE++ +++ D+W++ CI L + F ++L+
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 50 YQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTL---PIKKYTHEIL 106
+Q+ KG+ F +HRDL N+L+ K + +KI D GLAR ++K +
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNV-VKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 107 TLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTAL-FPG---DSELQQLLHIFRLLG 162
W APE + Y+ D+WS + E+ + A +PG D E + L +
Sbjct: 205 LKWM-APETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 163 TPNEKVWPGVSSLMN-WHEYPQWNP 186
P+ ++++ WH P P
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 2/98 (2%)
Query: 48 LMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT 107
+ QL V + I+HRD+K N+++ + T+K+ D G A A+ K + T
Sbjct: 135 IFRQLVSAVGYLRLKDIIHRDIKDENIVI-AEDFTIKLIDFGSA-AYLERGKLFYTFCGT 192
Query: 108 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 145
+ Y APEVL+G+ + ++MWS+ LV + F
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
++ + Q + + H + I+HRDLK N+L +K+AD G++ T I++
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTIQRRDSF 195
Query: 105 ILTLWYRAPEVLLGSTH----YSTAVDMWSVACIFAELV 139
I T ++ APEV++ T Y D+WS+ E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
++ + Q + + H + I+HRDLK N+L +K+AD G++ T I++
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDSF 195
Query: 105 ILTLWYRAPEVLLGSTH----YSTAVDMWSVACIFAELV 139
I T ++ APEV++ T Y D+WS+ E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHE 104
++ + Q + + H + I+HRDLK N+L +K+AD G++ T I++
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRXIQRRDXF 195
Query: 105 ILTLWYRAPEVLLGSTH----YSTAVDMWSVACIFAELV 139
I T ++ APEV++ T Y D+WS+ E+
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 234
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 15 LYLVFEYMD----TDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLK 70
L+LV E+ TDL K + G + + + ++ +G++ H H ++HRD+K
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTK-----GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIK 156
Query: 71 PHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTH----YSTAV 126
N+L+ + +K+ D G++ + + I T ++ APEV+ + Y
Sbjct: 157 GQNVLLT-ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKS 215
Query: 127 DMWSVACIFAELV 139
D+WS+ E+
Sbjct: 216 DLWSLGITAIEMA 228
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 15 LYLVFEY-MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LYLV EY + DL + F GE IP + + ++ + H G +HRD+KP N
Sbjct: 136 LYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDN 192
Query: 74 LLMDRKTMTLKIADLG 89
+L+DR +++AD G
Sbjct: 193 ILLDR-CGHIRLADFG 207
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 197
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 198 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 231
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 198
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 199 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 198
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 199 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 232
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 43 NTVKSLMYQLCKGVAFCH--------GH--GILHRDLKPHNLLMDRKTMTLKIADLGLAR 92
N + + + +G+A+ H GH I HRD+K N+L+ + +T IAD GLA
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL-KNNLTACIADFGLAL 179
Query: 93 AFTLPIKKY-TH-EILTLWYRAPEVLLGSTHYST----AVDMWSVACIFAELVTKTALFP 146
F TH ++ T Y APEVL G+ ++ +DM+++ + EL ++
Sbjct: 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAAD 239
Query: 147 G 147
G
Sbjct: 240 G 240
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 176 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 190
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 191 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 224
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 175
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 176 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 209
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 171 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 170
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 171 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + LY+V EYM L Y+RS ++ + + + +C+ + + G+ +HRD
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 133
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEILTLWYRAPEVLLGSTH 121
L N+L+ + K++D GL + + LP+K + APE L +
Sbjct: 134 LAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK----------WTAPEALREAA- 181
Query: 122 YSTAVDMWSVACIFAELVT 140
+ST D+WS + E+ +
Sbjct: 182 FSTKSDVWSFGILLWEIYS 200
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI 172
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 173 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 206
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + LY+V EYM L Y+RS ++ + + + +C+ + + G+ +HRD
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 127
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEILTLWYRAPEVLLGSTH 121
L N+L+ + K++D GL + + LP+K + APE L
Sbjct: 128 LAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK----------WTAPEALR-EKK 175
Query: 122 YSTAVDMWSVACIFAELVT 140
+ST D+WS + E+ +
Sbjct: 176 FSTKSDVWSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + LY+V EYM L Y+RS ++ + + + +C+ + + G+ +HRD
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 142
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEILTLWYRAPEVLLGSTH 121
L N+L+ + K++D GL + + LP+K + APE L
Sbjct: 143 LAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK----------WTAPEALR-EKK 190
Query: 122 YSTAVDMWSVACIFAELVT 140
+ST D+WS + E+ +
Sbjct: 191 FSTKSDVWSFGILLWEIYS 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILT--- 107
Q +G+ + H I+HRDLK +N+ + + +T+KI D GLA + + E L+
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFL-HEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSI 170
Query: 108 LWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
LW APEV+ YS D+++ + EL+T
Sbjct: 171 LWM-APEVIRMQDKNPYSFQSDVYAFGIVLYELMT 204
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 22/139 (15%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
E + LY+V EYM L Y+RS ++ + + + +C+ + + G+ +HRD
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRS--VLGGDCLLKFSLDVCEAMEYLEGNNFVHRD 314
Query: 69 LKPHNLLMDRKTMTLKIADLGLARAFT-------LPIKKYTHEILTLWYRAPEVLLGSTH 121
L N+L+ + K++D GL + + LP+K + APE L
Sbjct: 315 LAARNVLVSEDNVA-KVSDFGLTKEASSTQDTGKLPVK----------WTAPEALR-EKK 362
Query: 122 YSTAVDMWSVACIFAELVT 140
+ST D+WS + E+ +
Sbjct: 363 FSTKSDVWSFGILLWEIYS 381
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGL 90
F + + TV L Q+ V F H LHRD+KP N LM R+ + I D GL
Sbjct: 93 FNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152
Query: 91 ARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYST 124
A+ + TH+ + YR + L G+ Y++
Sbjct: 153 AKKYR---DTSTHQHIP--YRENKNLTGTARYAS 181
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGEN----IPVNTVKSLMYQ--------LCKGV 56
E R LYL EY +L ++R R + I +T +L Q + +G+
Sbjct: 96 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 155
Query: 57 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL 116
+ +HRDL N+L+ + KIAD GL+R + +KK + W
Sbjct: 156 DYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRLPVRWMAIES-- 212
Query: 117 LGSTHYSTAVDMWSVACIFAELVT 140
L + Y+T D+WS + E+V+
Sbjct: 213 LNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGEN----IPVNTVKSLMYQ--------LCKGV 56
E R LYL EY +L ++R R + I +T +L Q + +G+
Sbjct: 86 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 145
Query: 57 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL 116
+ +HRDL N+L+ + KIAD GL+R + +KK + W
Sbjct: 146 DYLSQKQFIHRDLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRLPVRWMAIES-- 202
Query: 117 LGSTHYSTAVDMWSVACIFAELVT 140
L + Y+T D+WS + E+V+
Sbjct: 203 LNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 90/220 (40%), Gaps = 36/220 (16%)
Query: 18 VFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD 77
+F +D L +R Q + TVK + +L + + I+HRD+KP N+L+D
Sbjct: 90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD 149
Query: 78 RKTMTLKIADLGLARAFTLPIK-KYTHEILTLWYRAPEVLLG--STHYSTAVDMWSVACI 134
+ I D +A LP + + T T Y APE+ YS AVD WS+
Sbjct: 150 EHG-HVHITDFNIAAM--LPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT 206
Query: 135 FAELVTKTALF--PGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATA 192
EL+ + + ++++H F W
Sbjct: 207 AYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW----------------------- 243
Query: 193 VPNLDKDGLDLLEQMLQYDPSKRISAKKAMEH-PYFDDLD 231
++ + LL+++L+ +P +R S +++ PY +D++
Sbjct: 244 ----SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 10/140 (7%)
Query: 5 QGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHG 63
+G GR + +V EYM+ L ++R+ G+ + + ++ + G+ + G
Sbjct: 116 EGVVTRGRLAM-IVTEYMENGSLDTFLRT--HDGQ-FTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKY--THEILTLWYRAPEVLLGST 120
+HRDL N+L+D + K++D GL+R P Y T + + + APE + T
Sbjct: 172 YVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 121 HYSTAVDMWSVACIFAELVT 140
+S+A D+WS + E++
Sbjct: 231 -FSSASDVWSFGVVMWEVLA 249
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
++++ EYM L Y+R R + + +C+ + + LHRDL N
Sbjct: 74 IFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 130
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + + +K++D GL+R + L +YT + + + PEVL+ S +S+ D+W+
Sbjct: 131 CLVNDQGV-VKVSDFGLSR-YVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWA 186
Query: 131 VACIFAELVTKTAL----FPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQW 184
+ E+ + + F + + RL +EKV+ + S WHE
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC--WHEKADE 244
Query: 185 NP 186
P
Sbjct: 245 RP 246
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
++++ EYM L Y+R R + + +C+ + + LHRDL N
Sbjct: 78 IFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 134
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + + +K++D GL+R + L +YT + + + PEVL+ S +S+ D+W+
Sbjct: 135 CLVNDQGV-VKVSDFGLSR-YVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWA 190
Query: 131 VACIFAELVTKTAL----FPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQW 184
+ E+ + + F + + RL +EKV+ + S WHE
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC--WHEKADE 248
Query: 185 NP 186
P
Sbjct: 249 RP 250
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLAR-----AFTLPIKKYTHEI 105
Q +G+ + H I+HRD+K +N+ + + +T+KI D GLA + + +++ T +
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFL-HEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV 198
Query: 106 LTLWYRAPEVLL--GSTHYSTAVDMWSVACIFAELVT 140
L + APEV+ + +S D++S + EL+T
Sbjct: 199 L---WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT 232
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
++++ EYM L Y+R R + + +C+ + + LHRDL N
Sbjct: 85 IFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 141
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + + +K++D GL+R + L +YT + + + PEVL+ S +S+ D+W+
Sbjct: 142 CLVNDQGV-VKVSDFGLSR-YVLD-DEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSDIWA 197
Query: 131 VACIFAELVTKTAL----FPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQW 184
+ E+ + + F + + RL +EKV+ + S WHE
Sbjct: 198 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC--WHEKADE 255
Query: 185 NP 186
P
Sbjct: 256 RP 257
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
++++ EYM L Y+R R + + +C+ + + LHRDL N
Sbjct: 79 IFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + + +K++D GL+R + L +YT + + + PEVL+ S +S+ D+W+
Sbjct: 136 CLVNDQGV-VKVSDFGLSR-YVLD-DEYTSSVGSKFPVRWSPPEVLMYSK-FSSKSDIWA 191
Query: 131 VACIFAELVTKTAL----FPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQW 184
+ E+ + + F + + RL +EKV+ + S WHE
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC--WHEKADE 249
Query: 185 NP 186
P
Sbjct: 250 RP 251
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 12 RTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVK-SLMYQLCKGVA----FCHGHGIL 65
R + L+++YM+ +LK+++ G ++P ++ ++C G A + H I+
Sbjct: 107 RNEMILIYKYMENGNLKRHL-----YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLL------ 117
HRD+K N+L+D + KI D G+++ T + + ++ TL Y PE +
Sbjct: 162 HRDVKSINILLD-ENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 118 GSTHYSTAVDMWSVACIFAELV 139
S YS V ++ V C + +V
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIV 242
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 19/182 (10%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
++++ EYM L Y+R R + + +C+ + + LHRDL N
Sbjct: 94 IFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTHEI---LTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + + +K++D GL+R + L +YT + + + PEVL+ S +S+ D+W+
Sbjct: 151 CLVNDQGV-VKVSDFGLSR-YVLD-DEYTSSVGSKFPVRWSPPEVLMYS-KFSSKSDIWA 206
Query: 131 VACIFAELVTKTAL----FPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQW 184
+ E+ + + F + + RL +EKV+ + S WHE
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC--WHEKADE 264
Query: 185 NP 186
P
Sbjct: 265 RP 266
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 13 TVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFC-HGHGILHRDLKP 71
T +++ E M T +K + + IP + + + K + + HG++HRD+KP
Sbjct: 97 TDVFIAMELMGTCAEKLKKRMQGP---IPERILGKMTVAIVKALYYLKEKHGVIHRDVKP 153
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL----LGSTHYSTAVD 127
N+L+D + +K+ D G++ + K Y APE + Y D
Sbjct: 154 SNILLDERGQ-IKLCDFGISGRL-VDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRAD 211
Query: 128 MWSVACIFAELVTKTALFP 146
+WS+ EL T FP
Sbjct: 212 VWSLGISLVELA--TGQFP 228
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 20/142 (14%)
Query: 12 RTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVK-SLMYQLCKGVA----FCHGHGIL 65
R + L+++YM+ +LK+++ G ++P ++ ++C G A + H I+
Sbjct: 107 RNEMILIYKYMENGNLKRHL-----YGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAII 161
Query: 66 HRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL--TLWYRAPEVLL------ 117
HRD+K N+L+D + KI D G+++ T + + ++ TL Y PE +
Sbjct: 162 HRDVKSINILLD-ENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTE 220
Query: 118 GSTHYSTAVDMWSVACIFAELV 139
S YS V ++ V C + +V
Sbjct: 221 KSDVYSFGVVLFEVLCARSAIV 242
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 101
+ T+ Q+ +G+ + +HRDL NLL+ + + +KI D GL RA Y
Sbjct: 114 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHY 172
Query: 102 T---HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
H + + APE L T +S A D W E+ T
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFT 213
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ ++ EYM+ L K++R + GE V + ++ + G+ + +HRDL N
Sbjct: 121 MMIITEYMENGALDKFLR--EKDGE-FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + APE + +++A D+WS
Sbjct: 178 ILVN-SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEA-ISYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E++T
Sbjct: 236 FGIVMWEVMT 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 101
+ T+ Q+ +G+ + +HRDL NLL+ + + +KI D GL RA Y
Sbjct: 120 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHY 178
Query: 102 T---HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
H + + APE L T +S A D W E+ T
Sbjct: 179 VMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFT 219
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 101
+ T+ Q+ +G+ + +HRDL NLL+ + + +KI D GL RA Y
Sbjct: 110 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHY 168
Query: 102 T---HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
H + + APE L T +S A D W E+ T
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFT 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 15 LYLVFEYM-----DTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDL 69
+ +V EYM DT LKK F V + ++ + G+ + G +HRDL
Sbjct: 98 VMIVTEYMENGSLDTFLKKNDGQFT-------VIQLVGMLRGISAGMKYLSDMGYVHRDL 150
Query: 70 KPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAV 126
N+L++ + K++D GL+R P YT + + + APE + +++A
Sbjct: 151 AARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEA-IAFRKFTSAS 208
Query: 127 DMWSVACIFAELVT 140
D+WS + E+V+
Sbjct: 209 DVWSYGIVMWEVVS 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 25/137 (18%)
Query: 25 DLKKYIRSFR-QTG-ENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMT 82
DL Y+ R +TG ++IP+ T+ M + G+ + LHRDL N ++ R MT
Sbjct: 127 DLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML-RDDMT 185
Query: 83 LKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL-----------LGSTHYSTAVDMWSV 131
+ +AD GL++ K Y+ + +YR + L Y++ D+W+
Sbjct: 186 VCVADFGLSK------KIYSGD----YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAF 235
Query: 132 ACIFAELVTKTAL-FPG 147
E+ T+ +PG
Sbjct: 236 GVTMWEIATRGMTPYPG 252
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 101
+ T+ Q+ +G+ + +HRDL NLL+ + + +KI D GL RA Y
Sbjct: 114 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHY 172
Query: 102 T---HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
H + + APE L T +S A D W E+ T
Sbjct: 173 VMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFT 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY 101
+ T+ Q+ +G+ + +HRDL NLL+ + + +KI D GL RA Y
Sbjct: 110 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHY 168
Query: 102 T---HEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
H + + APE L T +S A D W E+ T
Sbjct: 169 VMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFT 209
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 10 EGRTVLYLVFEYM-DTDLKKYIRSFRQTGEN----IPVNTVKSLMYQ--------LCKGV 56
E R LYL EY +L ++R R + I +T +L Q + +G+
Sbjct: 93 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 152
Query: 57 AFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVL 116
+ +HR+L N+L+ + KIAD GL+R + +KK + W
Sbjct: 153 DYLSQKQFIHRNLAARNILVGENYVA-KIADFGLSRGQEVYVKKTMGRLPVRWMAIES-- 209
Query: 117 LGSTHYSTAVDMWSVACIFAELVT 140
L + Y+T D+WS + E+V+
Sbjct: 210 LNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 30/169 (17%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWY 110
++ + + H I++RDLKP N+L+D + + + D GL + + T Y
Sbjct: 147 EIASALGYLHSLNIVYRDLKPENILLDSQGHIV-LTDFGLCKENIEHNSTTSTFCGTPEY 205
Query: 111 RAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSELQQLLHIFRLLGTPNEKVWP 170
APEV L Y VD W + + E++ F + + +I
Sbjct: 206 LAPEV-LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN----------- 253
Query: 171 GVSSLMNWHEYPQWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRISAK 219
P L PN+ LLE +LQ D +KR+ AK
Sbjct: 254 --------------KPLQLK---PNITNSARHLLEGLLQKDRTKRLGAK 285
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 13 TVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGH--------- 62
T LYL+ +Y + L Y++S + ++ L Y G+ CH H
Sbjct: 108 TQLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGL--CHLHTEIFSTQGK 160
Query: 63 -GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKY----THEILTLWYRAPEVL- 116
I HRDLK N+L+ +K T IADLGLA F + + T Y PEVL
Sbjct: 161 PAIAHRDLKSKNILV-KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD 219
Query: 117 --LGSTHYSTAV--DMWSVACIFAELVTKTALFPGDSELQQL 154
L H+ + + DM+S I E V + + G E QL
Sbjct: 220 ESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGGIVEEYQL 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 5 QGQNKEGRTVLYLVFEYMDT-DLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHG 63
+G GR + +V EYM+ L ++R+ G+ + + ++ + G+ + G
Sbjct: 116 EGVVTRGRLAM-IVTEYMENGSLDTFLRT--HDGQ-FTIMQLVGMLRGVGAGMRYLSDLG 171
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFT---LPIKKYTHEILTLWYRAPEVLLGST 120
+HRDL N+L+D + K++D GL+R T + + + APE + T
Sbjct: 172 YVHRDLAARNVLVD-SNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 121 HYSTAVDMWSVACIFAELVT 140
+S+A D+WS + E++
Sbjct: 231 -FSSASDVWSFGVVMWEVLA 249
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 121 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GLAR P YT + + + +PE + +++A D+WS
Sbjct: 178 ILIN-SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 236 YGIVLWEVMS 245
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 45 VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGL-ARAFTLPIKKYTH 103
++ + Q + + H + I+HRDLK N+L +K+AD G+ A+ I++
Sbjct: 110 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG-DIKLADFGVSAKNTRTXIQRRDS 168
Query: 104 EILTLWYRAPEVLLGSTH----YSTAVDMWSVACIFAELV 139
I T ++ APEV++ T Y D+WS+ E+
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 208
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 37/170 (21%)
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYS 123
+++RDLK NL++D K +KI D GL + T Y APEV L Y
Sbjct: 132 VVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDNDYG 189
Query: 124 TAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
AVD W + + E++ + + D E +F L+ LM +P
Sbjct: 190 RAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI-------------LMEEIRFP 231
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYF 227
+ L + LL +L+ DP +R+ AK+ M+H +F
Sbjct: 232 R-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 37/170 (21%)
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYS 123
+++RDLK NL++D K +KI D GL + T Y APEV L Y
Sbjct: 131 VVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDNDYG 188
Query: 124 TAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
AVD W + + E++ + + D E +F L+ LM +P
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI-------------LMEEIRFP 230
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYF 227
+ L + LL +L+ DP +R+ AK+ M+H +F
Sbjct: 231 R-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 37/170 (21%)
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYS 123
+++RDLK NL++D K +KI D GL + T Y APEV L Y
Sbjct: 270 VVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDNDYG 327
Query: 124 TAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
AVD W + + E++ + + D E +F L+ LM +P
Sbjct: 328 RAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI-------------LMEEIRFP 369
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYF 227
+ L + LL +L+ DP +R+ AK+ M+H +F
Sbjct: 370 R-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 37/170 (21%)
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYS 123
+++RDLK NL++D K +KI D GL + T Y APEV L Y
Sbjct: 130 VVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEV-LEDNDYG 187
Query: 124 TAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
AVD W + + E++ + + D E +F L+ LM +P
Sbjct: 188 RAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI-------------LMEEIRFP 229
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYF 227
+ L + LL +L+ DP +R+ AK+ M+H +F
Sbjct: 230 R-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 156
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 157 LSKALRADENXYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 216 RGMKGSEVTAMLEKGERMGCP 236
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 70/170 (41%), Gaps = 37/170 (21%)
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYS 123
+++RDLK NL++D K +KI D GL + T Y APEV L Y
Sbjct: 273 VVYRDLKLENLMLD-KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV-LEDNDYG 330
Query: 124 TAVDMWSVACIFAELVT-KTALFPGDSELQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYP 182
AVD W + + E++ + + D E +F L+ LM +P
Sbjct: 331 RAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELI-------------LMEEIRFP 372
Query: 183 QWNPQSLATAVPNLDKDGLDLLEQMLQYDPSKRIS-----AKKAMEHPYF 227
+ L + LL +L+ DP +R+ AK+ M+H +F
Sbjct: 373 R-----------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 172
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 232 RGMKGSEVTAMLEKGERMGCP 252
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 172
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 173 LSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 232 RGMKGSEVTAMLEKGERMGCP 252
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 121 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 178 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 236 YGIVLWEVMS 245
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 92 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 150
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 151 LSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 209
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 210 RGMKGSEVTAMLEKGERMGCP 230
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTH 103
S +Q+ +G+ + ++HRDL N+L+ + +KI+D GL+R +K+
Sbjct: 154 SFAWQISQGMQYLAEMSLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 104 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
I W A E L Y+T D+WS + E+VT
Sbjct: 213 RIPVKWM-AIESLFDHI-YTTQSDVWSFGVLLWEIVT 247
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 98 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 156
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 157 LSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 216 RGMKGSEVTAMLEKGERMGCP 236
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 112 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 170
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 171 LSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 230 RGMKGSEVTAMLEKGERMGCP 250
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 152
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 153 LSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 211
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 212 RGMKGSEVTAMLEKGERMGCP 232
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 8/141 (5%)
Query: 30 IRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLG 89
+ + Q ++ + L++Q+ G+ + +HRDL N+L+ + KI+D G
Sbjct: 104 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KISDFG 162
Query: 90 LARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT---KTA 143
L++A Y + W + APE + +S+ D+WS + E + K
Sbjct: 163 LSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYGQKPY 221
Query: 144 LFPGDSELQQLLHIFRLLGTP 164
SE+ +L +G P
Sbjct: 222 RGMKGSEVTAMLEKGERMGCP 242
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 17/181 (9%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
++++ EYM L Y+R R + + +C+ + + LHRDL N
Sbjct: 94 IFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTH--EILTLWYRAPEVLLGSTHYSTAVDMWSV 131
L++ + + +K++D GL+R + L ++ + + + PEVL+ S +S+ D+W+
Sbjct: 151 CLVNDQGV-VKVSDFGLSR-YVLDDEETSSVGSKFPVRWSPPEVLMYS-KFSSKSDIWAF 207
Query: 132 ACIFAELVTKTAL----FPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQWN 185
+ E+ + + F + + RL +EKV+ + S WHE
Sbjct: 208 GVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC--WHEKADER 265
Query: 186 P 186
P
Sbjct: 266 P 266
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 15 LYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
++++ EYM L Y+R R + + +C+ + + LHRDL N
Sbjct: 79 IFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 74 LLMDRKTMTLKIADLGLARAFTLPIKKYTH---EILTLWYRAPEVLLGSTHYSTAVDMWS 130
L++ + + +K++D GL+R + L +YT + + PEVL+ S +S+ D+W+
Sbjct: 136 CLVNDQGV-VKVSDFGLSR-YVLD-DEYTSSRGSKFPVRWSPPEVLMYSK-FSSKSDIWA 191
Query: 131 VACIFAELVTKTAL----FPGDSELQQLLHIFRLLG--TPNEKVWPGVSSLMNWHEYPQW 184
+ E+ + + F + + RL +EKV+ + S WHE
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC--WHEKADE 249
Query: 185 NP 186
P
Sbjct: 250 RP 251
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 13 TVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
T L+LV +Y + L Y+ + T E + ++T L + + V I HRD
Sbjct: 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 172
Query: 69 LKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILTLWYRAPEVL---LGST 120
LK N+L+ +K T IADLGLA T+ I H + T Y APEVL +
Sbjct: 173 LKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSINMK 230
Query: 121 HYST--AVDMWSVACIFAELVTKTAL 144
H+ + D++++ +F E+ + ++
Sbjct: 231 HFESFKRADIYAMGLVFWEIARRCSI 256
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGL 90
F + TV L Q+ + + H +HRD+KP N LM +K + I D GL
Sbjct: 95 FNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154
Query: 91 ARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 150
A+ + TH+ + YR + L G+ Y A I L + +
Sbjct: 155 AKKYR---DARTHQHIP--YRENKNLTGTARY---------ASINTHLGIEQSRRDDLES 200
Query: 151 LQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDK 198
L +L F L P W G+ + +Y + + + ++T + L K
Sbjct: 201 LGYVLMYFNLGSLP----WQGLKAATKRQKYERISEKKMSTPIEVLCK 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 109 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 165
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 166 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 223
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 224 YGIVLWEVMS 233
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 121 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 178 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 236 YGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 119 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 175
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 176 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 233
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 234 YGIVLWEVMS 243
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGL 90
F + TV L Q+ + + H +HRD+KP N LM +K + I D GL
Sbjct: 95 FNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154
Query: 91 ARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 150
A+ + TH+ + YR + L G+ Y A I L + +
Sbjct: 155 AKKYR---DARTHQHIP--YRENKNLTGTARY---------ASINTHLGIEQSRRDDLES 200
Query: 151 LQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDK 198
L +L F L P W G+ + +Y + + + ++T + L K
Sbjct: 201 LGYVLMYFNLGSLP----WQGLKAATKRQKYERISEKKMSTPIEVLCK 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 121 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 178 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 236 YGIVLWEVMS 245
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 92 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 148
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 149 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 206
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 207 YGIVLWEVMS 216
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTH 103
S +Q+ +G+ + ++HRDL N+L+ + +KI+D GL+R +K+
Sbjct: 154 SFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSXVKRSQG 212
Query: 104 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
I W A E L Y+T D+WS + E+VT
Sbjct: 213 RIPVKWM-AIESLFDHI-YTTQSDVWSFGVLLWEIVT 247
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 20/168 (11%)
Query: 33 FRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLM--DRKTMTLKIADLGL 90
F + TV L Q+ + + H +HRD+KP N LM +K + I D GL
Sbjct: 93 FNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 152
Query: 91 ARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALFPGDSE 150
A+ + TH+ + YR + L G+ Y A I L + +
Sbjct: 153 AKKYR---DARTHQHIP--YRENKNLTGTARY---------ASINTHLGIEQSRRDDLES 198
Query: 151 LQQLLHIFRLLGTPNEKVWPGVSSLMNWHEYPQWNPQSLATAVPNLDK 198
L +L F L P W G+ + +Y + + + ++T + L K
Sbjct: 199 LGYVLMYFNLGSLP----WQGLKAATKRQKYERISEKKMSTPIEVLCK 242
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 13 TVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
T L+LV +Y + L Y+ + T E + ++T L + + V I HRD
Sbjct: 74 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 133
Query: 69 LKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILTLWYRAPEVL---LGST 120
LK N+L+ +K T IADLGLA T+ I H + T Y APEVL +
Sbjct: 134 LKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSINMK 191
Query: 121 HYST--AVDMWSVACIFAELVTKTAL 144
H+ + D++++ +F E+ + ++
Sbjct: 192 HFESFKRADIYAMGLVFWEIARRCSI 217
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 121 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 178 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 236 YGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 121 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL+R P YT + + + +PE + +++A D+WS
Sbjct: 178 ILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 236 YGIVLWEVMS 245
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 13 TVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
T L+LV +Y + L Y+ + T E + ++T L + + V I HRD
Sbjct: 100 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 159
Query: 69 LKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILTLWYRAPEVL---LGST 120
LK N+L+ +K T IADLGLA T+ I H + T Y APEVL +
Sbjct: 160 LKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSINMK 217
Query: 121 HYST--AVDMWSVACIFAELVTKTAL 144
H+ + D++++ +F E+ + ++
Sbjct: 218 HFESFKRADIYAMGLVFWEIARRCSI 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 13 TVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
T L+LV +Y + L Y+ + T E + ++T L + + V I HRD
Sbjct: 75 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 134
Query: 69 LKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILTLWYRAPEVL---LGST 120
LK N+L+ +K T IADLGLA T+ I H + T Y APEVL +
Sbjct: 135 LKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSINMK 192
Query: 121 HYST--AVDMWSVACIFAELVTKTAL 144
H+ + D++++ +F E+ + ++
Sbjct: 193 HFESFKRADIYAMGLVFWEIARRCSI 218
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 13 TVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
T L+LV +Y + L Y+ + T E + ++T L + + V I HRD
Sbjct: 77 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 136
Query: 69 LKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILTLWYRAPEVL---LGST 120
LK N+L+ +K T IADLGLA T+ I H + T Y APEVL +
Sbjct: 137 LKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSINMK 194
Query: 121 HYST--AVDMWSVACIFAELVTKTAL 144
H+ + D++++ +F E+ + ++
Sbjct: 195 HFESFKRADIYAMGLVFWEIARRCSI 220
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 13 TVLYLVFEYMD-TDLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRD 68
T L+LV +Y + L Y+ + T E + ++T L + + V I HRD
Sbjct: 80 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRD 139
Query: 69 LKPHNLLMDRKTMTLKIADLGLA-----RAFTLPIKKYTHEILTLWYRAPEVL---LGST 120
LK N+L+ +K T IADLGLA T+ I H + T Y APEVL +
Sbjct: 140 LKSKNILV-KKNGTCCIADLGLAVRHDSATDTIDIAP-NHRVGTKRYMAPEVLDDSINMK 197
Query: 121 HYST--AVDMWSVACIFAELVTKTAL 144
H+ + D++++ +F E+ + ++
Sbjct: 198 HFESFKRADIYAMGLVFWEIARRCSI 223
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 5 QGQNKEGRTVLYLVFEYMDTD-LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHG 63
+G G+ V+ +V E+M+ L ++R + G+ + V ++ + G+ + G
Sbjct: 110 EGVVTRGKPVM-IVIEFMENGALDAFLR--KHDGQFTVIQLV-GMLRGIAAGMRYLADMG 165
Query: 64 ILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYT---HEILTLWYRAPEVLLGS 119
+HRDL N+L++ + K++D GL+R P YT +I W APE +
Sbjct: 166 YVHRDLAARNILVN-SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRW-TAPEAIQ-Y 222
Query: 120 THYSTAVDMWSVACIFAELVT 140
+++A D+WS + E+++
Sbjct: 223 RKFTSASDVWSYGIVMWEVMS 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 15 LYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
+ +V EYM+ + SF R+ V + ++ + G+ + G +HRDL N
Sbjct: 121 VMIVTEYMENG---SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177
Query: 74 LLMDRKTMTLKIADLGLARAFT-LPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWS 130
+L++ + K++D GL R P YT + + + +PE + +++A D+WS
Sbjct: 178 ILIN-SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEA-IAYRKFTSASDVWS 235
Query: 131 VACIFAELVT 140
+ E+++
Sbjct: 236 YGIVLWEVMS 245
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP---IKKYTH 103
S +Q+ +G+ + ++HRDL N+L+ + +KI+D GL+R +K+
Sbjct: 154 SFAWQISQGMQYLAEMKLVHRDLAARNILV-AEGRKMKISDFGLSRDVYEEDSYVKRSQG 212
Query: 104 EILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
I W A E L Y+T D+WS + E+VT
Sbjct: 213 RIPVKWM-AIESLFDHI-YTTQSDVWSFGVLLWEIVT 247
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 25/149 (16%)
Query: 15 LYLVFEYMD-TDLKKYIRSFR--------------QTGENIPVNTVKSLMYQLC------ 53
+ L+FEYM DL +++RS + + P S QLC
Sbjct: 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVA 184
Query: 54 KGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLP--IKKYTHEILTLWYR 111
G+A+ +HRDL N L+ + M +KIAD GL+R K ++ + + +
Sbjct: 185 AGMAYLSERKFVHRDLATRNCLVG-ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWM 243
Query: 112 APEVLLGSTHYSTAVDMWSVACIFAELVT 140
PE + Y+T D+W+ + E+ +
Sbjct: 244 PPESIF-YNRYTTESDVWAYGVVLWEIFS 271
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK- 100
+ T+ Q+ +G+ + +HRDL NLL+ + + +KI D GL RA LP
Sbjct: 120 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRA--LPQNDD 176
Query: 101 ----YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
H + + APE L T +S A D W E+ T
Sbjct: 177 HXVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFT 219
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 15 LYLVFEY-MDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHN 73
LYLV +Y + DL + F + +P + + ++ + H +HRD+KP N
Sbjct: 149 LYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDN 205
Query: 74 LLMDRKTMTLKIADLGLA-RAFTLPIKKYTHEILTLWYRAPEVLL----GSTHYSTAVDM 128
+LMD +++AD G + + + + T Y +PE+L G Y D
Sbjct: 206 ILMDMNGH-IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264
Query: 129 WSVA-CIFAELVTKTALF 145
WS+ C++ L +T +
Sbjct: 265 WSLGVCMYEMLYGETPFY 282
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 12/145 (8%)
Query: 26 LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKI 85
L KY++ R + + L++Q+ G+ + +HRDL N+L+ + KI
Sbjct: 456 LNKYLQQNRHVKDK----NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KI 510
Query: 86 ADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-- 140
+D GL++A Y + W + APE + +S+ D+WS + E +
Sbjct: 511 SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYG 569
Query: 141 -KTALFPGDSELQQLLHIFRLLGTP 164
K SE+ +L +G P
Sbjct: 570 QKPYRGMKGSEVTAMLEKGERMGCP 594
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Query: 26 LKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKI 85
L KY++ R ++ + L++Q+ G+ + +HRDL N+L+ + KI
Sbjct: 457 LNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA-KI 511
Query: 86 ADLGLARAFTLPIKKYTHEILTLW---YRAPEVLLGSTHYSTAVDMWSVACIFAELVT-- 140
+D GL++A Y + W + APE + +S+ D+WS + E +
Sbjct: 512 SDFGLSKALRADENYYKAQTHGKWPVKWYAPEC-INYYKFSSKSDVWSFGVLMWEAFSYG 570
Query: 141 -KTALFPGDSELQQLLHIFRLLGTP 164
K SE+ +L +G P
Sbjct: 571 QKPYRGMKGSEVTAMLEKGERMGCP 595
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKK- 100
+ T+ Q+ +G+ + +HRDL NLL+ + + +KI D GL RA LP
Sbjct: 110 LGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL-VKIGDFGLMRA--LPQNDD 166
Query: 101 ----YTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
H + + APE L T +S A D W E+ T
Sbjct: 167 HXVMQEHRKVPFAWCAPESLKTRT-FSHASDTWMFGVTLWEMFT 209
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGL 90
VN + + ++ KG+ + H GILH+DLK N+ D + I D GL
Sbjct: 129 VNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV--ITDFGL 175
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 28/132 (21%)
Query: 25 DLKKYIRSFRQTGEN---IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTM 81
DL ++ + R GEN +P+ T+ M + G+ + +HRDL N ++ + M
Sbjct: 117 DLHAFLLASR-IGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML-AEDM 174
Query: 82 TLKIADLGLAR------------AFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMW 129
T+ +AD GL+R A LP+K E L Y+ D+W
Sbjct: 175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALES-----------LADNLYTVHSDVW 223
Query: 130 SVACIFAELVTK 141
+ E++T+
Sbjct: 224 AFGVTMWEIMTR 235
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 133 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 191
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 192 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 239
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE- 104
++ + G+ + G +HRDL N+L++ + K++D GL+R P YT
Sbjct: 151 GMLRGIASGMKYLSDMGAVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 105 -ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ + + +PE + +++A D+WS + E+++
Sbjct: 210 GKIPIRWTSPEA-IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 109 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 167
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 168 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 166
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 118 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 176
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 177 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE- 104
++ + G+ + G +HRDL N+L++ + K++D GL+R P YT
Sbjct: 151 GMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 105 -ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ + + +PE + +++A D+WS + E+++
Sbjct: 210 GKIPIRWTSPEA-IAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 109 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 167
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 168 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 215
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 47 SLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHE- 104
++ + G+ + G +HRDL N+L++ + K++D GL+R P YT
Sbjct: 122 GMLRGIASGMKYLSDMGYVHRDLAARNILIN-SNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 105 -ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ + + +PE + +++A D+WS + E+++
Sbjct: 181 GKIPIRWTSPEA-IAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 166
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 53 CKGVAFCHGH---GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TL 108
+G+A+ H H I+HRD+K N+L+D + + + D GLA+ + T+
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 145
+ APE L + S D++ + EL+T F
Sbjct: 208 GHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 243
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 166
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 110 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 168
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 166
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 111 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 169
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 111 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 169
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 110 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 168
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 102 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 160
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 161 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 208
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 112 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 170
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 171 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 218
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 111 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 169
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 142 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 200
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 201 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 248
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 111 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 169
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 170 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 114 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 172
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 173 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 220
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 173
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 173
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 173
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 166
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
++ G + + + Q+ +G+AF +HRD+ N+L+ + KI D GLAR
Sbjct: 151 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARD 209
Query: 94 F---TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ I K + W APE + Y+ D+WS + E+ +
Sbjct: 210 IMNDSNYIVKGNARLPVKWM-APESIFDCV-YTVQSDVWSYGILLWEIFS 257
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILT 107
Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K +
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPV 232
Query: 108 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
W APE + Y+ D+WS + E+ +
Sbjct: 233 KW-MAPESIFDCV-YTVQSDVWSYGILLWEIFS 263
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDR----KTMTLKIADLGLARAFTLP 97
+ TV + QL + + H +++RD+KP N L+ R K + I D GLA+ + P
Sbjct: 96 LKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDP 155
Query: 98 IKKYTHEILTLWYRAPEVLLGSTHY 122
K H + YR + L G+ Y
Sbjct: 156 ETK-KH----IPYREHKSLTGTARY 175
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 40 IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK 99
+P + + Q +G+ + H ILH D+K N+L+ + D G A L
Sbjct: 163 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPD 220
Query: 100 KYTHEILTLWY-------RAPEVLLGSTHYSTAVDMWSVACIF 135
++LT Y APEV+LG + VD+WS C+
Sbjct: 221 GLGKDLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMM 262
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
++ G + + + Q+ +G+AF +HRD+ N+L+ + KI D GLAR
Sbjct: 143 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARD 201
Query: 94 F---TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ I K + W APE + Y+ D+WS + E+ +
Sbjct: 202 IMNDSNYIVKGNARLPVKWM-APESIFDCV-YTVQSDVWSYGILLWEIFS 249
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILT 107
Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 108 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
W APE + Y+ D+WS + E+ +
Sbjct: 231 KWM-APESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF---TLPIKKYTHEILT 107
Q+ +G+AF +HRD+ N+L+ + KI D GLAR + I K +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 108 LWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
W APE + Y+ D+WS + E+ +
Sbjct: 231 KWM-APESIFDCV-YTVQSDVWSYGILLWEIFS 261
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
++ G + + + Q+ +G+AF +HRD+ N+L+ + KI D GLAR
Sbjct: 149 KEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA-KIGDFGLARD 207
Query: 94 F---TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ I K + W APE + Y+ D+WS + E+ +
Sbjct: 208 IMNDSNYIVKGNARLPVKWM-APESIFDCV-YTVQSDVWSYGILLWEIFS 255
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 40 IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK 99
+P + + Q +G+ + H ILH D+K N+L+ + D G A L
Sbjct: 182 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFG--HAVCLQPD 239
Query: 100 KYTHEILTLWY-------RAPEVLLGSTHYSTAVDMWSVACIF 135
+LT Y APEV+LG + VD+WS C+
Sbjct: 240 GLGKSLLTGDYIPGTETHMAPEVVLGRS-CDAKVDVWSSCCMM 281
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ +G+ + ++HRDL N+L+ + +KI D GLA+
Sbjct: 105 REHKDNIGSQYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGLAKL 163
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 164 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 211
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDR----KTMTLKIADLGLARAFTLP 97
+ TV + QL + + H +++RD+KP N L+ R + I D GLA+ + P
Sbjct: 104 LKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDP 163
Query: 98 IKKYTHEILTLWYRAPEVLLGSTHYST 124
K H + YR + L G+ Y +
Sbjct: 164 ETK-KH----IPYREHKSLTGTARYMS 185
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D G A+
Sbjct: 110 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKL 168
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D G A+
Sbjct: 110 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKL 168
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D G A+
Sbjct: 110 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKL 168
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 169 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 216
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 13 TVLYLVFEYMDTDLKKYIRSF-RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKP 71
T + ++ E+M+ + SF RQ V + ++ + G+ + +HRDL
Sbjct: 107 TPVMIITEFMEN---GSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAA 163
Query: 72 HNLLMDRKTMTLKIADLGLARAFTLPIKK--YTHEI---LTLWYRAPEVLLGSTHYSTAV 126
N+L++ + K++D GL+R YT + + + + APE + +++A
Sbjct: 164 RNILVN-SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA-IQYRKFTSAS 221
Query: 127 DMWSVACIFAELVT 140
D+WS + E+++
Sbjct: 222 DVWSYGIVMWEVMS 235
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 53 CKGVAFCHGH---GILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEIL-TL 108
+G+A+ H H I+HRD+K N+L+D + + + D GLA+ + +
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV-VGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 109 WYRAPEVLLGSTHYSTAVDMWSVACIFAELVTKTALF 145
+ APE L + S D++ + EL+T F
Sbjct: 200 GHIAPE-YLSTGKSSEKTDVFGYGVMLLELITGQRAF 235
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D G A+
Sbjct: 108 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKL 166
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 167 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 214
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D G A+
Sbjct: 112 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKL 170
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 171 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 218
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 42 VNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDR----KTMTLKIADLGLARAFTLP 97
+ TV + QL + + H +++RD+KP N L+ R + + I D GLA+ + P
Sbjct: 99 LKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDP 158
Query: 98 IKKYTHEILTLWYRAPEVLLGSTHY 122
K H + YR + L G+ Y
Sbjct: 159 ETK-KH----IPYREHKSLTGTARY 178
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 34 RQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARA 93
R+ +NI + + Q+ KG+ + ++HRDL N+L+ + +KI D G A+
Sbjct: 115 REHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV-KTPQHVKITDFGRAKL 173
Query: 94 FTLPIKKYTHE--ILTLWYRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
K+Y E + + + A E +L Y+ D+WS EL+T
Sbjct: 174 LGAEEKEYHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMT 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHEILTLW 109
Q+CK +A+ +HRD+ N+L+ +K+ D GL+R K + L +
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLPIK 175
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ +PE + ++TA D+W A E+++
Sbjct: 176 WMSPES-INFRRFTTASDVWMFAVCMWEILS 205
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHEILTLW 109
Q+CK +A+ +HRD+ N+L+ +K+ D GL+R K + L +
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLPIK 191
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ +PE + ++TA D+W A E+++
Sbjct: 192 WMSPES-INFRRFTTASDVWMFAVCMWEILS 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 51 QLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFT-LPIKKYTHEILTLW 109
Q+CK +A+ +HRD+ N+L+ +K+ D GL+R K + L +
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPE-CVKLGDFGLSRYIEDEDYYKASVTRLPIK 179
Query: 110 YRAPEVLLGSTHYSTAVDMWSVACIFAELVT 140
+ +PE + ++TA D+W A E+++
Sbjct: 180 WMSPES-INFRRFTTASDVWMFAVCMWEILS 209
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 40 IPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIK 99
+P + + Q +G+ + H ILH D+K N+L+ + D G A L
Sbjct: 161 LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFG--HALCLQPD 218
Query: 100 KYTHEILTLWY-------RAPEVLLGSTHYSTAVDMWSVACIF 135
+LT Y APEV++G VD+WS C+
Sbjct: 219 GLGKSLLTGDYIPGTETHMAPEVVMGKP-CDAKVDIWSSCCMM 260
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,353,937
Number of Sequences: 62578
Number of extensions: 301589
Number of successful extensions: 2892
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 204
Number of HSP's that attempted gapping in prelim test: 730
Number of HSP's gapped (non-prelim): 1140
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)