Query 026668
Match_columns 235
No_of_seqs 24 out of 26
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 19:10:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026668.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026668hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xqr_A HSPBP1 protein; armadil 95.9 0.02 7E-07 49.2 7.6 86 140-227 100-186 (296)
2 4hxt_A De novo protein OR329; 95.8 0.027 9.1E-07 42.8 6.9 90 136-227 16-105 (252)
3 4db6_A Armadillo repeat protei 95.7 0.024 8.1E-07 42.8 6.3 87 139-227 113-199 (210)
4 4db6_A Armadillo repeat protei 95.6 0.039 1.3E-06 41.5 7.1 97 129-227 19-115 (210)
5 4hxt_A De novo protein OR329; 95.3 0.044 1.5E-06 41.5 6.6 90 136-227 142-231 (252)
6 4db8_A Armadillo-repeat protei 95.0 0.079 2.7E-06 40.9 7.2 89 137-227 69-157 (252)
7 4db8_A Armadillo-repeat protei 94.7 0.047 1.6E-06 42.1 5.2 89 137-227 153-241 (252)
8 1xm9_A Plakophilin 1; armadill 94.3 0.13 4.4E-06 45.3 7.8 90 137-227 17-106 (457)
9 1xm9_A Plakophilin 1; armadill 94.1 0.12 4.2E-06 45.5 7.3 97 128-227 337-439 (457)
10 3tt9_A Plakophilin-2; cell adh 93.3 0.11 3.7E-06 43.9 5.4 90 130-219 17-107 (233)
11 1jdh_A Beta-catenin; beta-cate 93.2 0.12 4.1E-06 43.9 5.3 82 137-218 116-197 (529)
12 1wa5_B Importin alpha subunit; 92.9 0.34 1.2E-05 42.3 7.9 87 139-227 148-234 (530)
13 1jdh_A Beta-catenin; beta-cate 92.2 0.45 1.5E-05 40.4 7.5 88 137-227 158-246 (529)
14 4b8j_A Importin subunit alpha- 91.0 0.57 2E-05 40.6 7.1 91 136-227 132-222 (528)
15 2z6h_A Catenin beta-1, beta-ca 90.8 0.49 1.7E-05 42.9 6.8 94 130-227 423-517 (644)
16 1xqr_A HSPBP1 protein; armadil 90.5 0.69 2.4E-05 39.7 7.2 90 136-227 139-228 (296)
17 3l6x_A Catenin delta-1; cateni 90.2 0.35 1.2E-05 46.2 5.5 112 106-219 20-146 (584)
18 2z6g_A B-catenin; FULL-length, 90.0 0.53 1.8E-05 44.7 6.6 94 130-227 559-653 (780)
19 2z6g_A B-catenin; FULL-length, 89.7 0.5 1.7E-05 44.8 6.1 92 128-219 240-331 (780)
20 2z6h_A Catenin beta-1, beta-ca 89.6 0.56 1.9E-05 42.5 6.1 88 136-224 112-199 (644)
21 3tpo_A Importin subunit alpha- 88.8 0.81 2.8E-05 40.6 6.4 80 141-220 139-218 (529)
22 2jdq_A Importin alpha-1 subuni 88.4 1.5 5.1E-05 36.2 7.4 87 140-227 83-169 (450)
23 4b8j_A Importin subunit alpha- 88.3 2.4 8.2E-05 36.7 8.9 98 128-227 292-390 (528)
24 3nmz_A APC variant protein; pr 88.1 1.5 5E-05 40.3 7.8 178 25-218 188-391 (458)
25 3nmz_A APC variant protein; pr 87.5 2.2 7.6E-05 39.1 8.6 196 23-225 67-304 (458)
26 3ul1_B Importin subunit alpha- 87.2 1.5 5.3E-05 38.9 7.2 79 142-220 121-199 (510)
27 3nmw_A APC variant protein; AR 86.9 0.66 2.3E-05 40.7 4.6 91 134-227 44-146 (354)
28 3nmw_A APC variant protein; AR 82.3 1.9 6.5E-05 37.8 5.5 188 38-227 98-324 (354)
29 2jdq_A Importin alpha-1 subuni 81.4 5 0.00017 33.1 7.3 87 139-227 293-380 (450)
30 3grl_A General vesicular trans 81.3 1.1 3.6E-05 44.3 3.8 187 25-217 20-265 (651)
31 1wa5_B Importin alpha subunit; 81.1 3.4 0.00011 36.1 6.5 85 141-227 360-447 (530)
32 3ul1_B Importin subunit alpha- 74.4 11 0.00038 33.4 8.0 98 128-227 322-420 (510)
33 3tpo_A Importin subunit alpha- 72.8 9.4 0.00032 33.8 7.1 98 128-227 341-439 (529)
34 3l6x_A Catenin delta-1; cateni 67.5 9.7 0.00033 36.3 6.4 95 128-224 361-463 (584)
35 3grl_A General vesicular trans 62.6 6.6 0.00023 38.7 4.4 78 143-220 143-222 (651)
36 1juq_A ADP-ribosylation factor 61.8 19 0.00064 29.1 6.3 82 129-221 58-149 (171)
37 1elk_A Target of MYB1; superhe 60.8 21 0.00073 28.2 6.3 83 129-221 61-154 (157)
38 3ldz_A STAM-1, signal transduc 57.3 37 0.0013 26.3 7.1 78 136-221 56-138 (140)
39 3now_A UNC-45 protein, SD10334 51.9 38 0.0013 33.7 7.7 85 140-227 599-684 (810)
40 3g2s_A C-terminal fragment of 42.3 65 0.0022 25.5 6.4 85 129-222 56-148 (149)
41 3now_A UNC-45 protein, SD10334 41.5 17 0.00058 36.2 3.4 97 128-226 542-641 (810)
42 1mhq_A ADP-ribosylation factor 40.1 49 0.0017 26.0 5.3 81 130-221 47-137 (148)
43 1x5b_A Signal transducing adap 37.6 96 0.0033 24.7 6.7 76 136-221 66-149 (163)
44 3tt9_A Plakophilin-2; cell adh 36.0 29 0.00098 29.1 3.5 72 142-215 72-144 (233)
45 3rru_A TOM1L1 protein; structu 34.3 19 0.00066 28.8 2.1 81 129-219 61-152 (152)
46 1nzn_A CGI-135 protein, fissio 25.2 23 0.0008 27.8 1.1 46 132-185 32-77 (126)
47 3l7h_A RE64145P, roadblock; LC 20.2 42 0.0014 25.4 1.6 27 40-66 46-74 (97)
No 1
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=95.94 E-value=0.02 Score=49.20 Aligned_cols=86 Identities=15% Similarity=0.177 Sum_probs=74.7
Q ss_pred HHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhc-CccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhc
Q 026668 140 ALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTR-GALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDK 218 (235)
Q Consensus 140 aLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~ar-g~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~ 218 (235)
.-|.++|--++-..+.|+..+-++.|+..|+++|... .+-.+..++-||-++.-+.++++..|.+.+|+..++++|++.
T Consensus 100 ~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~ 179 (296)
T 1xqr_A 100 WRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQ 179 (296)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCC
Confidence 4678888878888899999999999999999999864 455788999999998889999999999999999999999874
Q ss_pred CCCchhhHH
Q 026668 219 QVDENLRFM 227 (235)
Q Consensus 219 ~vd~~vRlK 227 (235)
|..++.+
T Consensus 180 --d~~v~~~ 186 (296)
T 1xqr_A 180 --VQKLKVK 186 (296)
T ss_dssp --CHHHHHH
T ss_pred --CHHHHHH
Confidence 6777766
No 2
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.80 E-value=0.027 Score=42.76 Aligned_cols=90 Identities=13% Similarity=0.138 Sum_probs=77.7
Q ss_pred hHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHH
Q 026668 136 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 215 (235)
Q Consensus 136 d~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~ll 215 (235)
+....-|++.|.-.|-.++..+....+..+++.++++|....+-.+..++.+|-.+--+++++...+-+.+|+..+.+++
T Consensus 16 ~~~~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll 95 (252)
T 4hxt_A 16 SETQKEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLL 95 (252)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHH
Confidence 45556788888888888887777778889999999999988888899999999999999999999999999999999999
Q ss_pred hhcCCCchhhHH
Q 026668 216 RDKQVDENLRFM 227 (235)
Q Consensus 216 Kd~~vd~~vRlK 227 (235)
++. ++++|..
T Consensus 96 ~~~--~~~v~~~ 105 (252)
T 4hxt_A 96 TST--DSEVQKE 105 (252)
T ss_dssp TCS--SHHHHHH
T ss_pred cCC--CHHHHHH
Confidence 963 5677755
No 3
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.72 E-value=0.024 Score=42.77 Aligned_cols=87 Identities=16% Similarity=0.153 Sum_probs=73.7
Q ss_pred HHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhc
Q 026668 139 VALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDK 218 (235)
Q Consensus 139 vaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~ 218 (235)
..-|+.+|.-.|...+..+....+..+++.|+++|....+-.|..++-+|-.+.-+++++...+.+.++++.+.+++++
T Consensus 113 ~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~- 191 (210)
T 4db6_A 113 LQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSH- 191 (210)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGC-
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhC-
Confidence 4456777877787777776666778899999999998777789999999999999999999999999999999999985
Q ss_pred CCCchhhHH
Q 026668 219 QVDENLRFM 227 (235)
Q Consensus 219 ~vd~~vRlK 227 (235)
-++++|.+
T Consensus 192 -~~~~v~~~ 199 (210)
T 4db6_A 192 -ENEKIQKE 199 (210)
T ss_dssp -SCHHHHHH
T ss_pred -CCHHHHHH
Confidence 46677766
No 4
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.61 E-value=0.039 Score=41.55 Aligned_cols=97 Identities=15% Similarity=0.133 Sum_probs=79.4
Q ss_pred cccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccH
Q 026668 129 RVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 208 (235)
Q Consensus 129 kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gl 208 (235)
++-+.+...-..-|++.|.-.|-..+..+....+..+++.++++|....+-.+..++-+|-.+..+++.+...+-+.+|+
T Consensus 19 ~LL~s~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i 98 (210)
T 4db6_A 19 QQLNSPDQQELQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGAL 98 (210)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHCCCH
Confidence 33333333444567888888888888888888888999999999998877788899999988888999999999999999
Q ss_pred HHHHHHHhhcCCCchhhHH
Q 026668 209 EEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 209 e~Va~llKd~~vd~~vRlK 227 (235)
+.++++|++. +.++|..
T Consensus 99 ~~L~~lL~~~--~~~v~~~ 115 (210)
T 4db6_A 99 PALVQLLSSP--NEQILQE 115 (210)
T ss_dssp HHHHHHTTCS--CHHHHHH
T ss_pred HHHHHHHcCC--cHHHHHH
Confidence 9999999876 5677765
No 5
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.33 E-value=0.044 Score=41.54 Aligned_cols=90 Identities=14% Similarity=0.167 Sum_probs=76.0
Q ss_pred hHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHH
Q 026668 136 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 215 (235)
Q Consensus 136 d~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~ll 215 (235)
+.-..-|++.|.-.|...+..+....+..+++.++++|....+-.+..++-+|-.+.-+++++...+.+.++++.+.+++
T Consensus 142 ~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~ll 221 (252)
T 4hxt_A 142 SEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLL 221 (252)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHH
Confidence 44455678888888887777777777789999999999987788899999999999988999999999999999999999
Q ss_pred hhcCCCchhhHH
Q 026668 216 RDKQVDENLRFM 227 (235)
Q Consensus 216 Kd~~vd~~vRlK 227 (235)
++. ++++|..
T Consensus 222 ~~~--~~~v~~~ 231 (252)
T 4hxt_A 222 TST--DSEVQKE 231 (252)
T ss_dssp GCS--CHHHHHH
T ss_pred CCC--cHHHHHH
Confidence 864 5677766
No 6
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.99 E-value=0.079 Score=40.87 Aligned_cols=89 Identities=15% Similarity=0.102 Sum_probs=72.5
Q ss_pred HHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHh
Q 026668 137 AEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR 216 (235)
Q Consensus 137 ~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llK 216 (235)
.-..-|++.|.-+|-.++..+....+..+++.++++|....+-.+..++.+|-.+-.+.+..+..+-+.+|++.++++|+
T Consensus 69 ~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~ 148 (252)
T 4db8_A 69 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLS 148 (252)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHh
Confidence 33456788888888878888888888899999999999877778899999888776665555488899999999999998
Q ss_pred hcCCCchhhHH
Q 026668 217 DKQVDENLRFM 227 (235)
Q Consensus 217 d~~vd~~vRlK 227 (235)
+. +.++|..
T Consensus 149 ~~--~~~v~~~ 157 (252)
T 4db8_A 149 SP--NEQILQE 157 (252)
T ss_dssp CS--CHHHHHH
T ss_pred CC--CHHHHHH
Confidence 75 6677765
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.66 E-value=0.047 Score=42.12 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=74.7
Q ss_pred HHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHh
Q 026668 137 AEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR 216 (235)
Q Consensus 137 ~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llK 216 (235)
.-..-|++.|.-.|-..+..+....+..+++.++++|....+-.+..++.+|-.+.-.++.+...+.+.+|++.+.++++
T Consensus 153 ~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~ 232 (252)
T 4db8_A 153 QILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQS 232 (252)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhC
Confidence 33455688888888777777777778899999999999887888999999999988888899999999999999999998
Q ss_pred hcCCCchhhHH
Q 026668 217 DKQVDENLRFM 227 (235)
Q Consensus 217 d~~vd~~vRlK 227 (235)
+. ++++|..
T Consensus 233 ~~--~~~v~~~ 241 (252)
T 4db8_A 233 HE--NEKIQKE 241 (252)
T ss_dssp CS--SSHHHHT
T ss_pred CC--CHHHHHH
Confidence 75 5677765
No 8
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=94.28 E-value=0.13 Score=45.34 Aligned_cols=90 Identities=21% Similarity=0.289 Sum_probs=75.7
Q ss_pred HHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHh
Q 026668 137 AEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR 216 (235)
Q Consensus 137 ~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llK 216 (235)
+.-.-|...|.-.|...+.++....+..+++.|+++|....+-.|.....+|--+-.++++|...+-+++||...+++|+
T Consensus 17 ~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~~i~~~G~i~~Lv~lL~ 96 (457)
T 1xm9_A 17 KYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLR 96 (457)
T ss_dssp HHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHh
Confidence 44556788888888777888877789999999999999777778899999999999999999999999999999999998
Q ss_pred hcCCCchhhHH
Q 026668 217 DKQVDENLRFM 227 (235)
Q Consensus 217 d~~vd~~vRlK 227 (235)
+.+ +++++..
T Consensus 97 ~~~-~~~~~~~ 106 (457)
T 1xm9_A 97 RTG-NAEIQKQ 106 (457)
T ss_dssp TCC-CHHHHHH
T ss_pred hCC-CHHHHHH
Confidence 654 4455544
No 9
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=94.14 E-value=0.12 Score=45.53 Aligned_cols=97 Identities=9% Similarity=0.081 Sum_probs=72.0
Q ss_pred ccccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCcc------chhhHHHHHHHHHhCCchhhhh
Q 026668 128 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGAL------EQGACLDALTSLMLDSSANQLD 201 (235)
Q Consensus 128 ~kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~l------eq~acLDaLl~lmvDSs~Nq~d 201 (235)
+++-..+++.=..=|...|.-++. +++.+....+ .+++-|+++|....+. .+.+++++|--++-.++++.+.
T Consensus 337 v~LL~~~~~~v~~~A~~aL~nls~-~~~~~~~i~~-~~i~~Lv~lL~~~~~~~~~~~~v~~~~l~~l~ni~~~~~~~~~~ 414 (457)
T 1xm9_A 337 ARLLQSGNSDVVRSGASLLSNMSR-HPLLHRVMGN-QVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQ 414 (457)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHT-SGGGHHHHHH-HTHHHHHHTTTSCCSCSTTHHHHHHHHHHHHHHHHTTCTHHHHH
T ss_pred HHHHhCCCHhHHHHHHHHHHHHhc-CHHHHHHHHH-hhhHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 566555554333334455554444 6677777666 4999999999875442 4469999999999999999999
Q ss_pred hhhhccHHHHHHHHhhcCCCchhhHH
Q 026668 202 FEACNGIEEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 202 FE~~~Gle~Va~llKd~~vd~~vRlK 227 (235)
+++++|+++++++++.. ..++++-|
T Consensus 415 i~~~g~l~~L~~L~~~~-~~~~i~~~ 439 (457)
T 1xm9_A 415 YFSSSMLNNIINLCRSS-ASPKAAEA 439 (457)
T ss_dssp HCCHHHHHHHHHHHHCT-TCHHHHHH
T ss_pred HHHcCCHHHHHHHHcCC-CcHHHHHH
Confidence 99999999999999965 45677766
No 10
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=93.35 E-value=0.11 Score=43.91 Aligned_cols=90 Identities=17% Similarity=0.300 Sum_probs=76.4
Q ss_pred ccCCCchHHH-HHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccH
Q 026668 130 VTSPSTDAEV-ALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 208 (235)
Q Consensus 130 itsp~Td~Ev-aLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gl 208 (235)
+.||..+.++ .-|.+.|+-.|..+++.+....+..+|..|+++|....+-.|..-.-+|.-|=.|+++|....-++.||
T Consensus 17 L~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI 96 (233)
T 3tt9_A 17 LEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGV 96 (233)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHH
T ss_pred hCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCH
Confidence 4555443233 567788888898889999999999999999999998777788888899999999999999999999999
Q ss_pred HHHHHHHhhcC
Q 026668 209 EEVAELIRDKQ 219 (235)
Q Consensus 209 e~Va~llKd~~ 219 (235)
..++++|+..+
T Consensus 97 ~~Lv~lL~~~~ 107 (233)
T 3tt9_A 97 PRLLQVLKQTR 107 (233)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHccCC
Confidence 99999999743
No 11
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=93.15 E-value=0.12 Score=43.90 Aligned_cols=82 Identities=13% Similarity=0.182 Sum_probs=70.5
Q ss_pred HHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHh
Q 026668 137 AEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIR 216 (235)
Q Consensus 137 ~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llK 216 (235)
.-...|++.|.-+|..++..+....+..+++.++++|....+-.+..+.++|-.+-.++++|...+-+.+|++.++++++
T Consensus 116 ~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~~~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~ 195 (529)
T 1jdh_A 116 SVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMR 195 (529)
T ss_dssp HHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHH
Confidence 34467888998889888888888888899999999998766666788888888888899999999999999999999999
Q ss_pred hc
Q 026668 217 DK 218 (235)
Q Consensus 217 d~ 218 (235)
+.
T Consensus 196 ~~ 197 (529)
T 1jdh_A 196 TY 197 (529)
T ss_dssp HC
T ss_pred hC
Confidence 75
No 12
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=92.85 E-value=0.34 Score=42.30 Aligned_cols=87 Identities=16% Similarity=0.116 Sum_probs=73.2
Q ss_pred HHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhc
Q 026668 139 VALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDK 218 (235)
Q Consensus 139 vaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~ 218 (235)
...|++.|.-.|-..+.++....+..++..|+++|....+-.+..++.+|-.+--|++++...+-..+++..+.+++++
T Consensus 148 ~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~Lv~lL~~~~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~- 226 (530)
T 1wa5_B 148 QLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNS- 226 (530)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGS-
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhcc-
Confidence 3456777777777777777777788899999999998778888999999999999999999888889999999999998
Q ss_pred CCCchhhHH
Q 026668 219 QVDENLRFM 227 (235)
Q Consensus 219 ~vd~~vRlK 227 (235)
.+.++|..
T Consensus 227 -~~~~v~~~ 234 (530)
T 1wa5_B 227 -NKPSLIRT 234 (530)
T ss_dssp -CCHHHHHH
T ss_pred -CCHHHHHH
Confidence 45666654
No 13
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=92.20 E-value=0.45 Score=40.41 Aligned_cols=88 Identities=15% Similarity=0.096 Sum_probs=62.0
Q ss_pred HHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCcc-chhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHH
Q 026668 137 AEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGAL-EQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 215 (235)
Q Consensus 137 ~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~l-eq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~ll 215 (235)
.-...+.+.|.-.|..+++++....+..+++.++++|.....- .+.++..+ +.-|-.++.|...+-+.++++.+.+++
T Consensus 158 ~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~-L~~l~~~~~~~~~~~~~g~~~~L~~ll 236 (529)
T 1jdh_A 158 KFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRV-LKVLSVCSSNKPAIVEAGGMQALGLHL 236 (529)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHH-HHHHTTSTTHHHHHHHTTHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHH-HHHHhcCcccHHHHHHCCCHHHHHHHH
Confidence 3345556666666777788888888889999999999765432 22344444 344557888998898889999999999
Q ss_pred hhcCCCchhhHH
Q 026668 216 RDKQVDENLRFM 227 (235)
Q Consensus 216 Kd~~vd~~vRlK 227 (235)
++. +.+++..
T Consensus 237 ~~~--~~~~~~~ 246 (529)
T 1jdh_A 237 TDP--SQRLVQN 246 (529)
T ss_dssp TSS--CHHHHHH
T ss_pred hCC--ChHHHHH
Confidence 875 4555544
No 14
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=90.98 E-value=0.57 Score=40.64 Aligned_cols=91 Identities=13% Similarity=0.027 Sum_probs=75.4
Q ss_pred hHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHH
Q 026668 136 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 215 (235)
Q Consensus 136 d~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~ll 215 (235)
+.--.-|++.|.-.|-.++..+....+..++..|+++|....+-.+..++-+|-.+--|++.+...+-..+++..+..+|
T Consensus 132 ~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL 211 (528)
T 4b8j_A 132 PQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVKLLGSSSDDVREQAVWALGNVAGDSPKCRDLVLANGALLPLLAQL 211 (528)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhCCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHH
Confidence 33345678888888887788888888899999999999987777889999999999999999999999999999999999
Q ss_pred hhcCCCchhhHH
Q 026668 216 RDKQVDENLRFM 227 (235)
Q Consensus 216 Kd~~vd~~vRlK 227 (235)
++. .+.+++..
T Consensus 212 ~~~-~~~~v~~~ 222 (528)
T 4b8j_A 212 NEH-TKLSMLRN 222 (528)
T ss_dssp CTT-CCHHHHHH
T ss_pred hcC-CCHHHHHH
Confidence 543 35555544
No 15
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=90.80 E-value=0.49 Score=42.88 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=71.3
Q ss_pred ccCCCchHHHH-HHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccH
Q 026668 130 VTSPSTDAEVA-LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 208 (235)
Q Consensus 130 itsp~Td~Eva-LALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gl 208 (235)
+++-.++.+|. -+++.|--+| .++.++....+..+++.|+++|.....-.|.++.-+|--+. ..+++...|++++|+
T Consensus 423 ~~~~~~~~~v~~~a~~aL~~La-~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~l~-~~~~~~~~i~~~g~l 500 (644)
T 2z6h_A 423 FVEGVRMEEIVEGCTGALHILA-RDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELA-QDKEAAEAIEAEGAT 500 (644)
T ss_dssp -CCSSCHHHHHHHHHHHHHHHT-TSHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHH-TSHHHHHHHHHTTCH
T ss_pred hcccccHHHHHHHHHHHHHHHh-cCHHHHHHHHhCCcHHHHHHHHcCCCHHHHHHHHHHHHHHH-cCHHHHHHHHHcCCh
Confidence 34445677875 4567776666 45577777888899999999998777667888887766654 458899999999999
Q ss_pred HHHHHHHhhcCCCchhhHH
Q 026668 209 EEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 209 e~Va~llKd~~vd~~vRlK 227 (235)
+.+.+++++. ++++|..
T Consensus 501 ~~L~~ll~~~--~~~vr~~ 517 (644)
T 2z6h_A 501 APLTELLHSR--NEGVATY 517 (644)
T ss_dssp HHHHHHTTCS--CHHHHHH
T ss_pred hHHHHHHcCC--CHHHHHH
Confidence 9999999865 5677654
No 16
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=90.51 E-value=0.69 Score=39.68 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=70.9
Q ss_pred hHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHH
Q 026668 136 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 215 (235)
Q Consensus 136 d~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~ll 215 (235)
+.-..=|+..|--+|-.++......-...++..|+++|....+-.|....=+|-.+.-.++++...|-+.+++..++++|
T Consensus 139 ~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~LL 218 (296)
T 1xqr_A 139 DTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVALV 218 (296)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHHHH
Confidence 34445577788777777777665555577999999999987777777777777777777888999999999999999999
Q ss_pred hhcCCCchhhHH
Q 026668 216 RDKQVDENLRFM 227 (235)
Q Consensus 216 Kd~~vd~~vRlK 227 (235)
+.. |.++|.+
T Consensus 219 ~~~--d~~v~~~ 228 (296)
T 1xqr_A 219 RTE--HSPFHEH 228 (296)
T ss_dssp TSC--CSTHHHH
T ss_pred cCC--ChhHHHH
Confidence 876 6677766
No 17
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=90.19 E-value=0.35 Score=46.17 Aligned_cols=112 Identities=18% Similarity=0.289 Sum_probs=76.4
Q ss_pred ccccccccccccccccccc------------cCc-cc-ccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHH
Q 026668 106 SFKEDSVDERVTSLDHIFT------------VDP-MR-VTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMN 171 (235)
Q Consensus 106 sl~~~~~~~~V~~l~~i~g------------~ep-~k-itsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~Vlld 171 (235)
-|.++| -+.+.++|.+.- +++ ++ +.|+ .+..-.-|...|.-.|.-+.+.|....+..+|..|++
T Consensus 20 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~LV~~L~s~-~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~ 97 (584)
T 3l6x_A 20 PLAQHE-RGSLASLDSLRKGGPPPPNWRQPELPEVIAMLGFR-LDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVG 97 (584)
T ss_dssp ---------------------CCCCCCCCCCHHHHHHHTTCS-CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHH
T ss_pred cccccc-cchHHHHHHHHhcCCCCCCcccccHHHHHHHHCCC-CHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHH
Confidence 344555 556677776633 222 22 3343 2333345778888889989999999999999999999
Q ss_pred HHhhcCccchhhHHHHHHHHHh-CCchhhhhhhhhccHHHHHHHHhhcC
Q 026668 172 ILSTRGALEQGACLDALTSLML-DSSANQLDFEACNGIEEVAELIRDKQ 219 (235)
Q Consensus 172 lL~arg~leq~acLDaLl~lmv-DSs~Nq~dFE~~~Gle~Va~llKd~~ 219 (235)
+|....+-.|....-+|--|-. |+++|....-+++||..++++|+..+
T Consensus 98 LL~s~~~~vq~~Aa~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~ 146 (584)
T 3l6x_A 98 LLDHPKKEVHLGACGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKAR 146 (584)
T ss_dssp GGGCSSHHHHHHHHHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCC
T ss_pred HHCCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCC
Confidence 9998878888888999999988 58999999999999999999999754
No 18
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=90.01 E-value=0.53 Score=44.67 Aligned_cols=94 Identities=14% Similarity=0.118 Sum_probs=73.1
Q ss_pred ccCCCchHHHH-HHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccH
Q 026668 130 VTSPSTDAEVA-LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGI 208 (235)
Q Consensus 130 itsp~Td~Eva-LALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gl 208 (235)
+++..++.||. -+++.|.-+| .++.++....+..+++.|+++|....+-.|.++..+|--+.- .+++...|+++.|+
T Consensus 559 ~~~~~~~~~v~~~a~~aL~~La-~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~-~~~~~~~i~~~g~i 636 (780)
T 2z6g_A 559 FVEGVRMEEIVEACTGALHILA-RDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ-DKEAAEAIEAEGAT 636 (780)
T ss_dssp CSTTCCHHHHHHHHHHHHHHHT-TSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHT-SHHHHHHHHHTTCH
T ss_pred hhcccChHHHHHHHHHHHHHHh-cChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhc-CHHHHHHHHHCCCH
Confidence 34455666764 4577777666 467777777788999999999998877888988888776654 47889999999999
Q ss_pred HHHHHHHhhcCCCchhhHH
Q 026668 209 EEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 209 e~Va~llKd~~vd~~vRlK 227 (235)
+.+.+++++. +++||..
T Consensus 637 ~~L~~Ll~~~--~~~Vr~~ 653 (780)
T 2z6g_A 637 APLTELLHSR--NEGVATY 653 (780)
T ss_dssp HHHHHGGGCS--CHHHHHH
T ss_pred HHHHHHHcCC--CHHHHHH
Confidence 9999999865 5667654
No 19
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=89.68 E-value=0.5 Score=44.84 Aligned_cols=92 Identities=13% Similarity=0.185 Sum_probs=76.8
Q ss_pred ccccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhcc
Q 026668 128 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNG 207 (235)
Q Consensus 128 ~kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~G 207 (235)
+++-..+.+.-...|+..|--+|..+...+....+..++..|+++|.....-.+..++++|-.+-.+++++...|-+..|
T Consensus 240 v~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~~~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~ 319 (780)
T 2z6g_A 240 VNMLGSPVDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGG 319 (780)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhcCChHHHHHHHHcCC
Confidence 44444444555677899999999998999998888999999999998766666788888888777888999999999999
Q ss_pred HHHHHHHHhhcC
Q 026668 208 IEEVAELIRDKQ 219 (235)
Q Consensus 208 le~Va~llKd~~ 219 (235)
++.+++++++..
T Consensus 320 i~~Lv~lL~~~~ 331 (780)
T 2z6g_A 320 PQALVNIMRTYT 331 (780)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHhcCC
Confidence 999999999753
No 20
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=89.57 E-value=0.56 Score=42.51 Aligned_cols=88 Identities=16% Similarity=0.209 Sum_probs=73.8
Q ss_pred hHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHH
Q 026668 136 DAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 215 (235)
Q Consensus 136 d~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~ll 215 (235)
+.-...|+..|.-+|-.+..++....+..+++.|+++|....+-.+.+++++|-.+-..+++|...+-+.+|++.+++++
T Consensus 112 ~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL 191 (644)
T 2z6h_A 112 DSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIM 191 (644)
T ss_dssp HHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCCHHHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHH
Confidence 44456778888888888788888888889999999999887777788889999888888999999999999999999999
Q ss_pred hhcCCCchh
Q 026668 216 RDKQVDENL 224 (235)
Q Consensus 216 Kd~~vd~~v 224 (235)
++.. ++++
T Consensus 192 ~~~~-~~~~ 199 (644)
T 2z6h_A 192 RTYT-YEKL 199 (644)
T ss_dssp TTCC-CHHH
T ss_pred HcCC-hHHH
Confidence 8764 3444
No 21
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=88.79 E-value=0.81 Score=40.62 Aligned_cols=80 Identities=15% Similarity=0.040 Sum_probs=70.2
Q ss_pred HHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhcCC
Q 026668 141 LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQV 220 (235)
Q Consensus 141 LALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~~v 220 (235)
-|.++|--+|-..+..+...-++.|+..|+.+|....+-.|..|+-||-.|-.|++.+...+-+++|+..++.+|+....
T Consensus 139 ~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~~~~r~~i~~~g~i~~Ll~lL~~~~~ 218 (529)
T 3tpo_A 139 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAGSAFRDLVIKHGAIDPLLALLAVPDL 218 (529)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHTTCSSCG
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccCHHHHHHHHHcCCcHHHHHHHhccch
Confidence 46778888887777777778888999999999988888889999999999999999999999999999999999986543
No 22
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=88.41 E-value=1.5 Score=36.23 Aligned_cols=87 Identities=17% Similarity=0.080 Sum_probs=67.9
Q ss_pred HHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhcC
Q 026668 140 ALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQ 219 (235)
Q Consensus 140 aLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~~ 219 (235)
.-|+++|.-+|-..++.+....+..++..|+.+|....+-.+..++.+|-.+.-|++.+...+-+.+++..+.+++++ .
T Consensus 83 ~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~-~ 161 (450)
T 2jdq_A 83 FESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSK-Q 161 (450)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTS-C
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcC-C
Confidence 446777777776555555555567799999999988777788999999999999998888888888999999999985 2
Q ss_pred CCchhhHH
Q 026668 220 VDENLRFM 227 (235)
Q Consensus 220 vd~~vRlK 227 (235)
.+.++|..
T Consensus 162 ~~~~v~~~ 169 (450)
T 2jdq_A 162 NRLTMTRN 169 (450)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 34566654
No 23
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=88.28 E-value=2.4 Score=36.74 Aligned_cols=98 Identities=9% Similarity=0.094 Sum_probs=77.1
Q ss_pred ccccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhc-CccchhhHHHHHHHHHhCCchhhhhhhhhc
Q 026668 128 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTR-GALEQGACLDALTSLMLDSSANQLDFEACN 206 (235)
Q Consensus 128 ~kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~ar-g~leq~acLDaLl~lmvDSs~Nq~dFE~~~ 206 (235)
+++-..+.+.-..-|++.|--+|-..+..+...-++.++..|+++|... .+..+..+.-+|-.+.-.++++...+-+.+
T Consensus 292 v~lL~~~~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~~v~~~A~~~L~nl~~~~~~~~~~~~~~~ 371 (528)
T 4b8j_A 292 VELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQNLKKSIKKEACWTISNITAGNKDQIQAVINAG 371 (528)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTSCHHHHHHHHHTT
T ss_pred HHHHcCCChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCCCcHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
Confidence 4444444556666789999888887777777777889999999999987 677788888887777777777777777889
Q ss_pred cHHHHHHHHhhcCCCchhhHH
Q 026668 207 GIEEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 207 Gle~Va~llKd~~vd~~vRlK 227 (235)
++..+.++|++. +.++|..
T Consensus 372 ~i~~L~~lL~~~--~~~v~~~ 390 (528)
T 4b8j_A 372 IIGPLVNLLQTA--EFDIKKE 390 (528)
T ss_dssp CHHHHHHHHHHS--CHHHHHH
T ss_pred CHHHHHHHHhcC--CHHHHHH
Confidence 999999999876 6777765
No 24
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=88.08 E-value=1.5 Score=40.27 Aligned_cols=178 Identities=16% Similarity=0.213 Sum_probs=100.2
Q ss_pred hhhHHHHHHHHH-------------HHHHHHHHHHHHHhhhhhhc-ccchhHHhhc-hHHHHHHHHHhhhcccchhhhhc
Q 026668 25 ATAVGELANSLK-------------QQRVQREITLALRTGLRDAR-AEFSFLRVRG-LRSLLKILRSVAESDSTIHFFCQ 89 (235)
Q Consensus 25 ~~~v~elv~sl~-------------~qR~yRevtlaLr~gLRDa~-AeFSFlR~rg-Lr~ll~fLrs~a~sd~~i~LF~~ 89 (235)
.+++.-|+.-|. ...+.++.+++|+.=-++-. .-..+....| +..|.+.|+| .+ ..+.-
T Consensus 188 ~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s--~~-~~v~~--- 261 (458)
T 3nmz_A 188 LGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKS--ES-EDLQQ--- 261 (458)
T ss_dssp TTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGC--SC-HHHHH---
T ss_pred CCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhC--CC-HHHHH---
Confidence 456666666663 35678899999987443322 2222334678 8888888875 11 11100
Q ss_pred cCCcCCccchhhhhccccc-cccccccccccccccccCc-ccc-cCCCchHHHHHHHHHhhhccccCcchHH-HhhhhhH
Q 026668 90 SQSVPELQVVPVLFQHSFK-EDSVDERVTSLDHIFTVDP-MRV-TSPSTDAEVALALRVLEGCCLLHRESAI-LAHKHKA 165 (235)
Q Consensus 90 sQs~~~lQvvPvLF~hsl~-~~~~~~~V~~l~~i~g~ep-~ki-tsp~Td~EvaLALrVLEGcCLlh~~s~~-~ah~~~a 165 (235)
+.+=+|..=|.. .++..+.|... =|++| +++ .+.+++.-..-|++.|--+|-.+++.+. ++....+
T Consensus 262 -------~A~~aL~nLs~~~~~~~k~~I~~~---GaI~~LV~lLl~s~~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Ga 331 (458)
T 3nmz_A 262 -------VIASVLRNLSWRADVNSKKTLREV---GSVKALMECALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGA 331 (458)
T ss_dssp -------HHHHHHHHHTSSCCHHHHHHHHHT---THHHHHHHHHTTCCSHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTH
T ss_pred -------HHHHHHHHHhcCCCHHHHHHHHHc---CCHHHHHHHHhcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHhcCc
Confidence 011222221211 00001111111 12334 453 3333445555677888777765545444 4447899
Q ss_pred HHHHHHHHhhcCcc----chhh---HHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhc
Q 026668 166 IKILMNILSTRGAL----EQGA---CLDALTSLMLDSSANQLDFEACNGIEEVAELIRDK 218 (235)
Q Consensus 166 v~VlldlL~arg~l----eq~a---cLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~ 218 (235)
+..|+++|.....- .+.. +|-.|-+.+.++++|...+-+++|+..++++|++.
T Consensus 332 l~~Lv~LL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~LL~~~ 391 (458)
T 3nmz_A 332 LAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQHLKSH 391 (458)
T ss_dssp HHHHHHHTTCCCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHSSCS
T ss_pred HHHHHHHhcCCCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHHHHcCC
Confidence 99999999865432 2332 33333334458999999999999999999999863
No 25
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=87.47 E-value=2.2 Score=39.07 Aligned_cols=196 Identities=12% Similarity=0.088 Sum_probs=123.6
Q ss_pred hhhhhHHHHHHHHHH--------------HHHHHHHHHHHHhhhhhhcccchhHHhhchHHHHHHHHHhhhcccchhhhh
Q 026668 23 AAATAVGELANSLKQ--------------QRVQREITLALRTGLRDARAEFSFLRVRGLRSLLKILRSVAESDSTIHFFC 88 (235)
Q Consensus 23 ~~~~~v~elv~sl~~--------------qR~yRevtlaLr~gLRDa~AeFSFlR~rgLr~ll~fLrs~a~sd~~i~LF~ 88 (235)
..++++--||+-|.. ..+..|-+|+|..=...---++...|..|+=.+|+-++.. .+-.+.+.+
T Consensus 67 ~~~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 144 (458)
T 3nmz_A 67 RQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQIRAY--CETCWEWQE 144 (458)
T ss_dssp HHHTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHHHHHHH--HHHHHHHHT
T ss_pred HHCCCHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh--hHHHHHHHH
Confidence 346788888888885 5788899999988777667778888888888888877653 222445444
Q ss_pred ccCCcCCc--------------cchhhhhccccccccccccccccccccccCc-cccc----------CCCchHH-HHHH
Q 026668 89 QSQSVPEL--------------QVVPVLFQHSFKEDSVDERVTSLDHIFTVDP-MRVT----------SPSTDAE-VALA 142 (235)
Q Consensus 89 ~sQs~~~l--------------QvvPvLF~hsl~~~~~~~~V~~l~~i~g~ep-~kit----------sp~Td~E-vaLA 142 (235)
+.=+..|- |-|=.|..-|.. ++..+.|...+ |++| +++- +++.+.+ ..-|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~-~e~R~~i~~~G---~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~A 220 (458)
T 3nmz_A 145 AHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFD-EEHRHAMNELG---GLQAIAELLQVDCEMYGLTNDHYSITLRRYA 220 (458)
T ss_dssp TTSSSSCCCSCC--CCCTTTTHHHHHHHHHHTTS-HHHHHHHHHTT---HHHHHHHHHHHHHHHSTTCCCHHHHHHHHHH
T ss_pred hhccccccccCCccchhhHHHHHHHHHHHHhcCC-HHHHHHHHHCC---CHHHHHHHHhhhhcccccccCCCCHHHHHHH
Confidence 32111221 222235444432 22122222221 2233 2221 1222222 2346
Q ss_pred HHHhhhccccCcchHHHhh-hhhHHHHHHHHHhhcCccchhhHHHHHHHHHh-CCchhhhhhhhhccHHHHHHHHhhcCC
Q 026668 143 LRVLEGCCLLHRESAILAH-KHKAIKILMNILSTRGALEQGACLDALTSLML-DSSANQLDFEACNGIEEVAELIRDKQV 220 (235)
Q Consensus 143 LrVLEGcCLlh~~s~~~ah-~~~av~VlldlL~arg~leq~acLDaLl~lmv-DSs~Nq~dFE~~~Gle~Va~llKd~~v 220 (235)
..+|.-.|......+.... ...+|..|+.+|....+-.|....-+|--+=. |++.|...+-+.+||...+++|.+.+
T Consensus 221 a~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~- 299 (458)
T 3nmz_A 221 GMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVK- 299 (458)
T ss_dssp HHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCC-
T ss_pred HHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhCCCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCC-
Confidence 7788888988887777664 45569999999987666667777777766655 35778888899999999999876654
Q ss_pred Cchhh
Q 026668 221 DENLR 225 (235)
Q Consensus 221 d~~vR 225 (235)
+++++
T Consensus 300 ~~~v~ 304 (458)
T 3nmz_A 300 KESTL 304 (458)
T ss_dssp SHHHH
T ss_pred CHHHH
Confidence 44444
No 26
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=87.17 E-value=1.5 Score=38.88 Aligned_cols=79 Identities=16% Similarity=0.073 Sum_probs=66.8
Q ss_pred HHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhcCC
Q 026668 142 ALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQV 220 (235)
Q Consensus 142 ALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~~v 220 (235)
|.++|--.|-..++.+...-+..|+..|+.+|....+-.|..|+-+|--|-.|++.++..+-+.+|+..++.+++....
T Consensus 121 Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~~~~r~~v~~~G~i~~Ll~lL~~~~~ 199 (510)
T 3ul1_B 121 SAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDL 199 (510)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTCSSCG
T ss_pred HHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCChHHHHHHHHhccc
Confidence 5566665555566666677788899999999988778889999999999999999999999999999999999986543
No 27
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=86.90 E-value=0.66 Score=40.70 Aligned_cols=91 Identities=16% Similarity=0.220 Sum_probs=73.5
Q ss_pred CchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhc----C-------ccchhhHHHHHHHHHhCCchhhhhh
Q 026668 134 STDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTR----G-------ALEQGACLDALTSLMLDSSANQLDF 202 (235)
Q Consensus 134 ~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~ar----g-------~leq~acLDaLl~lmvDSs~Nq~dF 202 (235)
|++.++..|++.|.-.+-- ++++....+..+++.|+++|... | +-.|....-+|--+-.++++|...+
T Consensus 44 ~~~~~~~~A~~aL~nls~d-~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~~~~k~~i 122 (354)
T 3nmw_A 44 PVEHQICPAVCVLMKLSFD-EEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGDVANKATL 122 (354)
T ss_dssp GGGGTHHHHHHHHHHHHTS-HHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHcCC-HHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 5678889999999988865 89999999999999999999631 1 3356778888888888888888888
Q ss_pred hhhcc-HHHHHHHHhhcCCCchhhHH
Q 026668 203 EACNG-IEEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 203 E~~~G-le~Va~llKd~~vd~~vRlK 227 (235)
....| |...+++|+. -+++++..
T Consensus 123 ~~~~GaIp~LV~LL~s--~~~~v~~~ 146 (354)
T 3nmw_A 123 CSMKGCMRALVAQLKS--ESEDLQQV 146 (354)
T ss_dssp HHCHHHHHHHHHGGGC--SCHHHHHH
T ss_pred HHcCCcHHHHHHHHCC--CCHHHHHH
Confidence 78889 9999999984 34555544
No 28
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=82.33 E-value=1.9 Score=37.78 Aligned_cols=188 Identities=12% Similarity=0.130 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHhhhhhhc-ccchhHHhhc-hHHHHHHHHHhhh---cccchhhhhc--------cCCcCCccchhhhhc
Q 026668 38 QRVQREITLALRTGLRDAR-AEFSFLRVRG-LRSLLKILRSVAE---SDSTIHFFCQ--------SQSVPELQVVPVLFQ 104 (235)
Q Consensus 38 qR~yRevtlaLr~gLRDa~-AeFSFlR~rg-Lr~ll~fLrs~a~---sd~~i~LF~~--------sQs~~~lQvvPvLF~ 104 (235)
..+.++.+++|+.=-++-. .-..+....| +..|++.|+|--. .+..-.|.+- .+.|.+...||.|.+
T Consensus 98 ~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~ 177 (354)
T 3nmw_A 98 ITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALME 177 (354)
T ss_dssp HHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHH
Confidence 4578888888886443322 2222334678 8888888875100 0111111111 133455667888877
Q ss_pred ccccccc--ccc----cccccc--------c---ccccCc--ccccCCCchH---HH-HHHHHHhhhccc---cCcchHH
Q 026668 105 HSFKEDS--VDE----RVTSLD--------H---IFTVDP--MRVTSPSTDA---EV-ALALRVLEGCCL---LHRESAI 158 (235)
Q Consensus 105 hsl~~~~--~~~----~V~~l~--------~---i~g~ep--~kitsp~Td~---Ev-aLALrVLEGcCL---lh~~s~~ 158 (235)
--++... +.. .+.++. . ..|.=| +++-..+++. +| .-|..+|.-+|- .+++.+.
T Consensus 178 lL~~~~~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~ 257 (354)
T 3nmw_A 178 CALEVKKESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDHRQ 257 (354)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHhhccCCHHHHH
Confidence 5332211 100 001110 1 122222 3333333332 33 345555555554 4677788
Q ss_pred HhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhcCCCchhhHH
Q 026668 159 LAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 159 ~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~~vd~~vRlK 227 (235)
..-++.++..|+++|.....-.|..+.-+|--+-..+++|+..+-+++|+...+++|+.. ++++|..
T Consensus 258 ~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~--~~~i~~~ 324 (354)
T 3nmw_A 258 ILRENNCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSK--HKMIAMG 324 (354)
T ss_dssp HHHTTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCS--SHHHHHH
T ss_pred HHHHcCCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCC--CHHHHHH
Confidence 888899999999999877777888888888877768899999999999999999999864 5566654
No 29
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=81.36 E-value=5 Score=33.09 Aligned_cols=87 Identities=14% Similarity=0.052 Sum_probs=64.2
Q ss_pred HHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhC-CchhhhhhhhhccHHHHHHHHhh
Q 026668 139 VALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLD-SSANQLDFEACNGIEEVAELIRD 217 (235)
Q Consensus 139 vaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvD-Ss~Nq~dFE~~~Gle~Va~llKd 217 (235)
..-|++.|..+|-.++......-+..++..++++|....+-.+.++.-+|-.+..+ ++++...+-+.+++..+.+++++
T Consensus 293 r~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~ 372 (450)
T 2jdq_A 293 KKEACWTISNITAGNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTV 372 (450)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGS
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcC
Confidence 34457777666655555444445567899999999987777788888888888777 55666667778899999999997
Q ss_pred cCCCchhhHH
Q 026668 218 KQVDENLRFM 227 (235)
Q Consensus 218 ~~vd~~vRlK 227 (235)
. +.++|..
T Consensus 373 ~--~~~v~~~ 380 (450)
T 2jdq_A 373 M--DSKIVQV 380 (450)
T ss_dssp S--CHHHHHH
T ss_pred C--CHHHHHH
Confidence 5 6677765
No 30
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=81.33 E-value=1.1 Score=44.25 Aligned_cols=187 Identities=18% Similarity=0.269 Sum_probs=121.0
Q ss_pred hhhHHHHHHHHHHHHH---HHHHHHHHHhhhhhhcccchhHHhhchHHHHHHHHHhhhc--------ccchhhhhccCCc
Q 026668 25 ATAVGELANSLKQQRV---QREITLALRTGLRDARAEFSFLRVRGLRSLLKILRSVAES--------DSTIHFFCQSQSV 93 (235)
Q Consensus 25 ~~~v~elv~sl~~qR~---yRevtlaLr~gLRDa~AeFSFlR~rgLr~ll~fLrs~a~s--------d~~i~LF~~sQs~ 93 (235)
+..+..|++-++.--+ .|+--++||.=-||.++++. .+||+.|+..|+.-.+- |.-..+|+....=
T Consensus 20 ~etI~~L~~Rl~~~tl~eDRR~Av~~Lk~~sk~y~~~Vg---~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~ 96 (651)
T 3grl_A 20 AETIQKLCDRVASSTLLDDRRNAVRALKSLSKKYRLEVG---IQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEE 96 (651)
T ss_dssp HHHHHHHHHHHHHCCSHHHHHHHHHHHHHTTTTTTTHHH---HHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC---
T ss_pred hhHHHHHHHHHhhccchhHHHHHHHHHHHHHHHhHHHhh---hhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcc
Confidence 3445555554443322 36777888888888888766 78999999988764321 2223678754421
Q ss_pred C----------------------Cccchhhhhccccccccccccccc---c------------ccc----cccCc-cccc
Q 026668 94 P----------------------ELQVVPVLFQHSFKEDSVDERVTS---L------------DHI----FTVDP-MRVT 131 (235)
Q Consensus 94 ~----------------------~lQvvPvLF~hsl~~~~~~~~V~~---l------------~~i----~g~ep-~kit 131 (235)
+ +-.-||.|++. |+.....-++.+ + ..| -|+.. |.+-
T Consensus 97 ~~~~~~~~~~~~~~~~~~d~f~~~~~~i~~Ll~l-L~~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL 175 (651)
T 3grl_A 97 EVEENSTRQSEDLGSQFTEIFIKQQENVTLLLSL-LEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLL 175 (651)
T ss_dssp -----------CHHHHHHHHHHHSTHHHHHHHHH-TTCCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGG
T ss_pred cccccccccchHHHHHHHHHHHcCCccHHHHHHH-hcCccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHH
Confidence 1 12236666653 221110001111 1 111 12222 2222
Q ss_pred CCCchHHHH--HHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCc----cchhhHHHHHHHHHhCCchhhhhhhhh
Q 026668 132 SPSTDAEVA--LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGA----LEQGACLDALTSLMLDSSANQLDFEAC 205 (235)
Q Consensus 132 sp~Td~Eva--LALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~----leq~acLDaLl~lmvDSs~Nq~dFE~~ 205 (235)
+-+ .|+. -|+-+|.-.+--++....+..--+|.+.+++|+...|. ....-||-.+-.++=+.++||.-|-+.
T Consensus 176 ~d~--rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt 253 (651)
T 3grl_A 176 ADS--REVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEG 253 (651)
T ss_dssp GCS--SHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred hCc--hHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHc
Confidence 222 2443 35778888888899998999999999999999999776 456889999999999999999999999
Q ss_pred ccHHHHHHHHhh
Q 026668 206 NGIEEVAELIRD 217 (235)
Q Consensus 206 ~Gle~Va~llKd 217 (235)
+++.+++.+++.
T Consensus 254 ~~i~~L~~LL~~ 265 (651)
T 3grl_A 254 SYIQRMKPWFEV 265 (651)
T ss_dssp TCGGGGGGGGCC
T ss_pred CCHHHHHHHhCC
Confidence 999999999974
No 31
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=81.07 E-value=3.4 Score=36.06 Aligned_cols=85 Identities=11% Similarity=-0.003 Sum_probs=63.6
Q ss_pred HHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCc---hhhhhhhhhccHHHHHHHHhh
Q 026668 141 LALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSS---ANQLDFEACNGIEEVAELIRD 217 (235)
Q Consensus 141 LALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs---~Nq~dFE~~~Gle~Va~llKd 217 (235)
-|++.|--.|-.++......-...+++.|+++|....+-.|.+++.+|-.+..+.+ ++...+.+.+++..++.++++
T Consensus 360 ~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~ 439 (530)
T 1wa5_B 360 EACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEI 439 (530)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhC
Confidence 34555555554444443333456789999999988777889999999988887643 677778888999999999987
Q ss_pred cCCCchhhHH
Q 026668 218 KQVDENLRFM 227 (235)
Q Consensus 218 ~~vd~~vRlK 227 (235)
. +.++|..
T Consensus 440 ~--~~~v~~~ 447 (530)
T 1wa5_B 440 A--DNRIIEV 447 (530)
T ss_dssp C--CHHHHHH
T ss_pred C--CHHHHHH
Confidence 5 7778766
No 32
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=74.43 E-value=11 Score=33.38 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=72.0
Q ss_pred ccccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCch-hhhhhhhhc
Q 026668 128 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSA-NQLDFEACN 206 (235)
Q Consensus 128 ~kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~-Nq~dFE~~~ 206 (235)
+++-+-+.+.-..-|...|--+|-..+......-.+.+++.++++|.....-.|..+.=+|.-+..+++. +...+-+++
T Consensus 322 ~~LL~~~~~~v~~~A~~aL~nl~a~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g 401 (510)
T 3ul1_B 322 PSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCG 401 (510)
T ss_dssp C-CTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTT
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHcCcHHHHHHHHhcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCC
Confidence 3444444444445667777777877888888888899999999999988777888888788777776544 445677888
Q ss_pred cHHHHHHHHhhcCCCchhhHH
Q 026668 207 GIEEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 207 Gle~Va~llKd~~vd~~vRlK 227 (235)
+++..+++|+.. |.+++..
T Consensus 402 ~i~~L~~LL~~~--d~~i~~~ 420 (510)
T 3ul1_B 402 IIEPLMNLLSAK--DTKIIQV 420 (510)
T ss_dssp CHHHHHHGGGCS--CHHHHHH
T ss_pred CHHHHHHHhcCC--CHHHHHH
Confidence 999999999764 5566654
No 33
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=72.78 E-value=9.4 Score=33.82 Aligned_cols=98 Identities=15% Similarity=0.132 Sum_probs=70.9
Q ss_pred ccccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCc-hhhhhhhhhc
Q 026668 128 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSS-ANQLDFEACN 206 (235)
Q Consensus 128 ~kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs-~Nq~dFE~~~ 206 (235)
+++-+.+.+.-..-|...|--+|-..+......-.+.++..++++|.....-.|..+.=+|.-+..+++ ++...+-+.+
T Consensus 341 ~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g 420 (529)
T 3tpo_A 341 PSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKAAAWAITNYTSGGTVEQIVYLVHCG 420 (529)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTT
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCc
Confidence 344333334434556777777787788888888888999999999998877778777778877777654 4445677888
Q ss_pred cHHHHHHHHhhcCCCchhhHH
Q 026668 207 GIEEVAELIRDKQVDENLRFM 227 (235)
Q Consensus 207 Gle~Va~llKd~~vd~~vRlK 227 (235)
+|...+++|+.. |.+++..
T Consensus 421 ~i~~L~~LL~~~--d~~i~~~ 439 (529)
T 3tpo_A 421 IIEPLMNLLSAK--DTKIIQV 439 (529)
T ss_dssp CHHHHHHGGGCS--CHHHHHH
T ss_pred CHHHHHHHhcCC--CHHHHHH
Confidence 999999999754 5566543
No 34
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=67.50 E-value=9.7 Score=36.33 Aligned_cols=95 Identities=14% Similarity=0.122 Sum_probs=67.2
Q ss_pred ccccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcC-c-------cchhhHHHHHHHHHhCCchhh
Q 026668 128 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRG-A-------LEQGACLDALTSLMLDSSANQ 199 (235)
Q Consensus 128 ~kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg-~-------leq~acLDaLl~lmvDSs~Nq 199 (235)
+++-..+++.-+.=|.+.|--+|.- +..+..- ..+++.-|+.+|.... . -.+.+++=||-.|+-.++.|.
T Consensus 361 v~LL~s~~~~v~~~A~~aL~nLs~~-~~~~~~I-~~g~ip~LV~LL~~~~~~~~~~~s~~v~~~a~~tL~NL~a~~~~~~ 438 (584)
T 3l6x_A 361 ADLLTNEHERVVKAASGALRNLAVD-ARNKELI-GKHAIPNLVKNLPGGQQNSSWNFSEDTVISILNTINEVIAENLEAA 438 (584)
T ss_dssp HHGGGCSCHHHHHHHHHHHHHHHTT-CSCHHHH-HHHHHHHHHHTSSSSSCSGGGTCCHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHhCC-hhHHHHH-HhCCHHHHHHHhcCCcccccccchHHHHHHHHHHHHHHhcCCHHHH
Confidence 5555555665555566666666654 4455555 4579999999997642 1 123556677777788999999
Q ss_pred hhhhhhccHHHHHHHHhhcCCCchh
Q 026668 200 LDFEACNGIEEVAELIRDKQVDENL 224 (235)
Q Consensus 200 ~dFE~~~Gle~Va~llKd~~vd~~v 224 (235)
+..-+++||..++.++++++-.+++
T Consensus 439 ~~I~~~g~I~~Lv~LL~s~~~~~~v 463 (584)
T 3l6x_A 439 KKLRETQGIEKLVLINKSGNRSEKE 463 (584)
T ss_dssp HHHHHTTHHHHHHHHHTCSSSCHHH
T ss_pred HHHHHCCChHHHHHHHhCCCCChHH
Confidence 9999999999999999987544433
No 35
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=62.63 E-value=6.6 Score=38.70 Aligned_cols=78 Identities=15% Similarity=0.150 Sum_probs=56.4
Q ss_pred HHHhhhccccCcc--hHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHHhhcCC
Q 026668 143 LRVLEGCCLLHRE--SAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELIRDKQV 220 (235)
Q Consensus 143 LrVLEGcCLlh~~--s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~llKd~~v 220 (235)
++.|+-.|...+. -+.......+|.-|+++|....-..+...+..|..+-=+++..|+-+.--+|.+.+..|++..|-
T Consensus 143 lqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~Eg~ 222 (651)
T 3grl_A 143 VKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNGAIQKIVAFENAFERLLDIITEEGN 222 (651)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHHTG
T ss_pred HHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCHHHHHHHHHhccHHHHHHHHHhcCC
Confidence 5566666665555 33444455666666666666555566667777777777888889998888999999999999875
No 36
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=61.83 E-value=19 Score=29.12 Aligned_cols=82 Identities=18% Similarity=0.296 Sum_probs=55.6
Q ss_pred cccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhH----HHHHHHHHhhc------CccchhhHHHHHHHHHhCCchh
Q 026668 129 RVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKA----IKILMNILSTR------GALEQGACLDALTSLMLDSSAN 198 (235)
Q Consensus 129 kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~a----v~VlldlL~ar------g~leq~acLDaLl~lmvDSs~N 198 (235)
||.++ ...+.-+||.+|+-|.-+|- .--|+..| ++.|+.++..+ .+-.+.-||..+-..
T Consensus 58 rl~~~-n~~vql~AL~LLd~~vkNCG---~~Fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W------- 126 (171)
T 1juq_A 58 KIQSP-QEWEALQALTVLEACMKNCG---RRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSW------- 126 (171)
T ss_dssp HHTCS-SHHHHHHHHHHHHHHHHHSH---HHHHHHHTSHHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHHHHH-------
T ss_pred HhcCC-CHHHHHHHHHHHHHHHHHcC---HHHHHHHhhHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHHHH-------
Confidence 34444 45677889999999998753 22333333 44455666532 133567788777765
Q ss_pred hhhhhhhccHHHHHHHHhhcCCC
Q 026668 199 QLDFEACNGIEEVAELIRDKQVD 221 (235)
Q Consensus 199 q~dFE~~~Gle~Va~llKd~~vd 221 (235)
...|...+++.++-+.||..|+.
T Consensus 127 ~~~f~~~~~i~~~y~~Lk~~G~~ 149 (171)
T 1juq_A 127 TMALPEEAKIKDAYHMLKRQGIV 149 (171)
T ss_dssp HHHCTTCHHHHHHHHHHHHTTSC
T ss_pred HHHcCCCcHHHHHHHHHHHCCCC
Confidence 44588888999999999999973
No 37
>1elk_A Target of MYB1; superhelix of helices, endocytosis/exocytosis complex; 1.50A {Homo sapiens} SCOP: a.118.9.2
Probab=60.76 E-value=21 Score=28.20 Aligned_cols=83 Identities=24% Similarity=0.323 Sum_probs=52.2
Q ss_pred cccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHH-----HHHHHHhhcCc---cchhhHHHHHHHHHhCCchhhh
Q 026668 129 RVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIK-----ILMNILSTRGA---LEQGACLDALTSLMLDSSANQL 200 (235)
Q Consensus 129 kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~-----VlldlL~arg~---leq~acLDaLl~lmvDSs~Nq~ 200 (235)
||.+.+...+.-+||.+|+-|.-++-. --|+..|-+ +++.++..++. -.+.-||..+-.. ..
T Consensus 61 rl~~~~n~~v~l~AL~LLd~~vkNcG~---~fh~eva~~~fl~e~Lvk~~~~k~~~~~~Vk~kil~li~~W-------~~ 130 (157)
T 1elk_A 61 RIVGNKNFHEVMLALTVLETCVKNCGH---RFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSW-------AD 130 (157)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHHHSCH---HHHHHHTSHHHHHHHTHHHHSTTTCCCHHHHHHHHHHHHHH-------HH
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHhCH---HHHHHHhhHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHH-------HH
Confidence 454445567788999999999988632 223333322 25555654442 3567777777654 33
Q ss_pred hhhh---hccHHHHHHHHhhcCCC
Q 026668 201 DFEA---CNGIEEVAELIRDKQVD 221 (235)
Q Consensus 201 dFE~---~~Gle~Va~llKd~~vd 221 (235)
.|+. +.++.++-+.||.+|+.
T Consensus 131 ~f~~~p~l~~i~~~Y~~Lk~~G~~ 154 (157)
T 1elk_A 131 AFRSSPDLTGVVTIYEDLRRKGLE 154 (157)
T ss_dssp HHTTCTTCHHHHHHHHHHHHHTCC
T ss_pred HcCCCcchHHHHHHHHHHHHcCCC
Confidence 5653 45678888889998864
No 38
>3ldz_A STAM-1, signal transducing adapter molecule 1; ubiquitin-binding, cytoplasm, UBL conjugation, endosome, membrane, protein transport, SH3 domain; 2.60A {Homo sapiens} SCOP: a.118.9.0
Probab=57.34 E-value=37 Score=26.30 Aligned_cols=78 Identities=12% Similarity=0.096 Sum_probs=49.9
Q ss_pred hHHHHHHHHHhhhccccCcch--HHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhhhcc---HHH
Q 026668 136 DAEVALALRVLEGCCLLHRES--AILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEACNG---IEE 210 (235)
Q Consensus 136 d~EvaLALrVLEGcCLlh~~s--~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~~~G---le~ 210 (235)
..+.-+||.+|+-|.-++-.- ...+.+ .=+..+..++....+-.+.-||..+-+. ...|+..++ +.+
T Consensus 56 ~~~ql~AL~LLe~~vkNcG~~f~~evas~-~Fl~el~~l~~~~~~~Vk~kil~li~~W-------~~~f~~~~~l~~i~~ 127 (140)
T 3ldz_A 56 PHVAMQALTLLGACVSNCGKIFHLEVCSR-DFASEVSNVLNKGHPKVCEKLKALMVEW-------TDEFKNDPQLSLISA 127 (140)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHSSH-HHHHHHHHHHHHSCHHHHHHHHHHHHHH-------HHHHTTCGGGTHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCHHHHHHHhhH-HHHHHHHHHhccCCHHHHHHHHHHHHHH-------HHHhCCCCCchHHHH
Confidence 467788999999998876331 122222 2334455666554555667777766644 446766555 777
Q ss_pred HHHHHhhcCCC
Q 026668 211 VAELIRDKQVD 221 (235)
Q Consensus 211 Va~llKd~~vd 221 (235)
+-+.||..|+.
T Consensus 128 ~Y~~Lk~~G~~ 138 (140)
T 3ldz_A 128 MIKNLKEQGVT 138 (140)
T ss_dssp HHHHHHHTTCC
T ss_pred HHHHHHHccCc
Confidence 77899998874
No 39
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=51.91 E-value=38 Score=33.68 Aligned_cols=85 Identities=18% Similarity=0.113 Sum_probs=64.9
Q ss_pred HHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHHHHHHHHHhCCchhhhhhhh-hccHHHHHHHHhhc
Q 026668 140 ALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACLDALTSLMLDSSANQLDFEA-CNGIEEVAELIRDK 218 (235)
Q Consensus 140 aLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acLDaLl~lmvDSs~Nq~dFE~-~~Gle~Va~llKd~ 218 (235)
.=|+..|-.++-.....+...-+-.++..|+++|....+..|.+.+.++--++. +++++..|.. .+++.-.+.++..
T Consensus 599 ~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~-~~~~~~~~v~~~g~l~~Lv~LL~s- 676 (810)
T 3now_A 599 FESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVM-SEDVIKMFEGNNDRVKFLALLCED- 676 (810)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTT-SHHHHHHHHSSSSHHHHHHHGGGC-
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhC-ChHHHHHHHhccCcHHHHHHHhcC-
Confidence 347777777777766666666677889999999999999999999988766554 7789999985 6677777888765
Q ss_pred CCCchhhHH
Q 026668 219 QVDENLRFM 227 (235)
Q Consensus 219 ~vd~~vRlK 227 (235)
-+.++|..
T Consensus 677 -~d~~vq~~ 684 (810)
T 3now_A 677 -EDEETATA 684 (810)
T ss_dssp -SSHHHHHH
T ss_pred -CCHHHHHH
Confidence 35566654
No 40
>3g2s_A C-terminal fragment of sortilin-related receptor; ADP-ribosylation factor binding protein GGA1, VHS, acidic- cluster dileucine signal, sorla; 1.70A {Homo sapiens} SCOP: a.118.9.2 PDB: 3g2t_A* 3g2u_A 3g2v_A* 3g2w_A 1ujk_A* 1jwf_A 1ujj_A 1jwg_A* 1py1_A*
Probab=42.28 E-value=65 Score=25.53 Aligned_cols=85 Identities=18% Similarity=0.273 Sum_probs=55.3
Q ss_pred cccCCCchHHHHHHHHHhhhccccCcch--HHHhhhhhHHHHHHHHHhhc------CccchhhHHHHHHHHHhCCchhhh
Q 026668 129 RVTSPSTDAEVALALRVLEGCCLLHRES--AILAHKHKAIKILMNILSTR------GALEQGACLDALTSLMLDSSANQL 200 (235)
Q Consensus 129 kitsp~Td~EvaLALrVLEGcCLlh~~s--~~~ah~~~av~VlldlL~ar------g~leq~acLDaLl~lmvDSs~Nq~ 200 (235)
||.+ +...+.-+||.+|+.|.-++-.- ...|. ..=++.|+.++..+ .+-.+.-||..+-+. ..
T Consensus 56 rl~~-~n~~v~l~AL~LLe~cvkNCG~~fh~eias-~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W-------~~ 126 (149)
T 3g2s_A 56 KIQS-PQEWEAIQALTVLETCMKSCGKRFHDEVGK-FRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW-------TV 126 (149)
T ss_dssp HHTC-SSHHHHHHHHHHHHHHHHHCCHHHHHHHTS-HHHHHHHHHHHCTTTTGGGSCHHHHHHHHHHHHHH-------HH
T ss_pred HHcC-CCHHHHHHHHHHHHHHHHhcCHHHHHHHhh-HHHHHHHHHHHcccccCCCCCHHHHHHHHHHHHHH-------HH
Confidence 3444 34567778999999998776432 12222 22234456666542 233567777777665 45
Q ss_pred hhhhhccHHHHHHHHhhcCCCc
Q 026668 201 DFEACNGIEEVAELIRDKQVDE 222 (235)
Q Consensus 201 dFE~~~Gle~Va~llKd~~vd~ 222 (235)
.|...+++.++-+.||+.|+-.
T Consensus 127 ~f~~~p~i~~~Y~~Lk~~Giv~ 148 (149)
T 3g2s_A 127 GLPEEVKIAEAYQMLKKQGIVK 148 (149)
T ss_dssp HCTTCHHHHHHHHHHHHTTCCC
T ss_pred HhCCCchHHHHHHHHHHCcCcC
Confidence 6888899999999999999743
No 41
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=41.52 E-value=17 Score=36.17 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=68.3
Q ss_pred ccccCCCchHHHHHHHHHhhhccccCcchHHHhhh--hhHHHHHHHHHhhcCc-cchhhHHHHHHHHHhCCchhhhhhhh
Q 026668 128 MRVTSPSTDAEVALALRVLEGCCLLHRESAILAHK--HKAIKILMNILSTRGA-LEQGACLDALTSLMLDSSANQLDFEA 204 (235)
Q Consensus 128 ~kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~--~~av~VlldlL~arg~-leq~acLDaLl~lmvDSs~Nq~dFE~ 204 (235)
+.+-.+.++.=-..|.+.|.-.|..+.....+.++ +.++.-|+++|...+. +.+...+.||--+--.++.|....-+
T Consensus 542 v~LL~s~~~~~k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~ 621 (810)
T 3now_A 542 LRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIK 621 (810)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHccCCHHHHHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCCCCcHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 55555555555567778888777766666655432 4589999999875433 44456677887777777788888888
Q ss_pred hccHHHHHHHHhhcCCCchhhH
Q 026668 205 CNGIEEVAELIRDKQVDENLRF 226 (235)
Q Consensus 205 ~~Gle~Va~llKd~~vd~~vRl 226 (235)
..|+..+.+++...+ +.+|.
T Consensus 622 aG~l~~Lv~LL~s~~--~~Vq~ 641 (810)
T 3now_A 622 EQGVSKIEYYLMEDH--LYLTR 641 (810)
T ss_dssp TTHHHHHHHHHHSCC--TTHHH
T ss_pred cCCHHHHHHHHcCCC--HHHHH
Confidence 999999999998653 44553
No 42
>1mhq_A ADP-ribosylation factor binding protein GGA2; super helix, protein transport; 2.20A {Homo sapiens} SCOP: a.118.9.2
Probab=40.15 E-value=49 Score=26.04 Aligned_cols=81 Identities=22% Similarity=0.249 Sum_probs=54.8
Q ss_pred ccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHh----hc------CccchhhHHHHHHHHHhCCchhh
Q 026668 130 VTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILS----TR------GALEQGACLDALTSLMLDSSANQ 199 (235)
Q Consensus 130 itsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~----ar------g~leq~acLDaLl~lmvDSs~Nq 199 (235)
|.++ ...+.-+||.+|+-|.-++- .--|+..|-+-++|-|. .+ .+-.+.-||..+-+. .
T Consensus 47 l~~~-n~~vql~AL~LLe~~vkNCG---~~fh~evas~~Fl~eL~kl~~~k~~~~~~~~~Vk~kil~li~~W-------~ 115 (148)
T 1mhq_A 47 IQSP-QEKEALYALTVLEMCMNHCG---EKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSW-------T 115 (148)
T ss_dssp HTCS-SHHHHHHHHHHHHHHHHHSC---HHHHHHHTSHHHHHHHHHTTCCSTTSCCCCHHHHHHHHHHHHHH-------H
T ss_pred hcCC-CHHHHHHHHHHHHHHHHHcC---HHHHHHHhhHHHHHHHHHHHccccCCCCCCHHHHHHHHHHHHHH-------H
Confidence 4443 45677889999999998764 33344445455555443 21 223567777777665 4
Q ss_pred hhhhhhccHHHHHHHHhhcCCC
Q 026668 200 LDFEACNGIEEVAELIRDKQVD 221 (235)
Q Consensus 200 ~dFE~~~Gle~Va~llKd~~vd 221 (235)
..|...+++.++-+.||..|+.
T Consensus 116 ~~f~~~p~i~~~y~~Lk~~G~~ 137 (148)
T 1mhq_A 116 VWFPEDIKIRDAYQMLKKQGII 137 (148)
T ss_dssp HHCTTCHHHHHHHHHHHHTTSS
T ss_pred HHcCCCchHHHHHHHHHHcCCC
Confidence 5688888899999999999973
No 43
>1x5b_A Signal transducing adaptor molecule 2; VHS domain, ubiquitin binding, STAM2, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l0t_B
Probab=37.55 E-value=96 Score=24.67 Aligned_cols=76 Identities=9% Similarity=0.119 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhhhccccCcchHHHhhhhhH----HHHHHHHHhhcC-ccchhhHHHHHHHHHhCCchhhhhhhh---hcc
Q 026668 136 DAEVALALRVLEGCCLLHRESAILAHKHKA----IKILMNILSTRG-ALEQGACLDALTSLMLDSSANQLDFEA---CNG 207 (235)
Q Consensus 136 d~EvaLALrVLEGcCLlh~~s~~~ah~~~a----v~VlldlL~arg-~leq~acLDaLl~lmvDSs~Nq~dFE~---~~G 207 (235)
..+.-+||.+|+-|.-++- ..-|...| ++.+..++..+. +-.+.-||..+-.. ...|+. +.+
T Consensus 66 ~~vql~AL~LLd~~vkNcG---~~Fh~evas~~Fl~el~~l~~~~~~~~Vk~kil~li~~W-------~~~f~~~~~l~~ 135 (163)
T 1x5b_A 66 PHVALQALTLLGACVANCG---KIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEW-------SEEFQKDPQFSL 135 (163)
T ss_dssp HHHHHHHHHHHHHHHHHTC---HHHHHHHTSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-------HHHTTTCSTTHH
T ss_pred HHHHHHHHHHHHHHHHHhh---HHHHHHHhhHHHHHHHHHHHccCCCHHHHHHHHHHHHHH-------HHHhcCCcccHH
Confidence 4577789999999988753 22333333 344555555322 34667777765543 335665 455
Q ss_pred HHHHHHHHhhcCCC
Q 026668 208 IEEVAELIRDKQVD 221 (235)
Q Consensus 208 le~Va~llKd~~vd 221 (235)
+.++-+.||.+|+.
T Consensus 136 i~~~Y~~Lk~~G~~ 149 (163)
T 1x5b_A 136 ISATIKSMKEEGIT 149 (163)
T ss_dssp HHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHcCCC
Confidence 77888899998864
No 44
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=36.00 E-value=29 Score=29.09 Aligned_cols=72 Identities=11% Similarity=0.087 Sum_probs=49.7
Q ss_pred HHHHhhhccccCcchHHHhhhhhHHHHHHHHHhh-cCccchhhHHHHHHHHHhCCchhhhhhhhhccHHHHHHHH
Q 026668 142 ALRVLEGCCLLHRESAILAHKHKAIKILMNILST-RGALEQGACLDALTSLMLDSSANQLDFEACNGIEEVAELI 215 (235)
Q Consensus 142 ALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~a-rg~leq~acLDaLl~lmvDSs~Nq~dFE~~~Gle~Va~ll 215 (235)
|...|.-.+.-+++.|....++.||..|+++|.. ...-.|..+.-+|..+-. +++|.+..-+ .|+...++++
T Consensus 72 Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~~~~~~~e~a~~aL~nLS~-~~~~k~~i~~-~~i~~Lv~ll 144 (233)
T 3tt9_A 72 VCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTRDLETKKQITGLLWNLSS-NDKLKNLMIT-EALLTLTENI 144 (233)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHHT-SGGGHHHHHH-HHHHHHCCCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHc-ChhhHHHHHh-ccHHHHHHHH
Confidence 4444444455678999999999999999999985 445566666666666654 4566666554 4677666654
No 45
>3rru_A TOM1L1 protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, super-helical protein; 3.00A {Homo sapiens}
Probab=34.26 E-value=19 Score=28.78 Aligned_cols=81 Identities=17% Similarity=0.193 Sum_probs=48.1
Q ss_pred cccCCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHH-----HHhhcC-cc--chhhHHHHHHHHHhCCchhhh
Q 026668 129 RVTSPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMN-----ILSTRG-AL--EQGACLDALTSLMLDSSANQL 200 (235)
Q Consensus 129 kitsp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~Vlld-----lL~arg-~l--eq~acLDaLl~lmvDSs~Nq~ 200 (235)
||.+.+...++-+||.+||.|.-++- .--|+-.|-+-++| ++..+. +. .+.-||..+-+. ..
T Consensus 61 Rl~~~~n~~~~l~AL~LLe~cvkNCG---~~fh~eiask~Fl~e~L~kl~~~~~~~~~~Vk~kil~li~~W-------a~ 130 (152)
T 3rru_A 61 RISKNYNHKEIQLTLSLIDMCVQNCG---PSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTW-------SQ 130 (152)
T ss_dssp HHTTCCBHHHHHHHHHHHHHHHHHSC---HHHHHHHSSHHHHTTTTGGGGSGGGCCCHHHHHHHHHHHHHH-------HT
T ss_pred HHcCCCChHHHHHHHHHHHHHHHhcC---HHHHHHHHhhHhHHHHHHHHhcCCCCCcHHHHHHHHHHHHHH-------HH
Confidence 45544455566789999999987653 33445555444553 333332 22 567777776665 34
Q ss_pred hhhh---hccHHHHHHHHhhcC
Q 026668 201 DFEA---CNGIEEVAELIRDKQ 219 (235)
Q Consensus 201 dFE~---~~Gle~Va~llKd~~ 219 (235)
.|+. ++++.++-+.||+.|
T Consensus 131 ~F~~~p~l~~i~~~Y~~Lk~~G 152 (152)
T 3rru_A 131 GFPGGVDVSEVKEVYLDLVKKG 152 (152)
T ss_dssp CCSSSCCCHHHHHHHHHHHHC-
T ss_pred HhCCCCcchHHHHHHHHHHHCc
Confidence 5766 456666666677654
No 46
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=25.20 E-value=23 Score=27.83 Aligned_cols=46 Identities=24% Similarity=0.307 Sum_probs=32.2
Q ss_pred CCCchHHHHHHHHHhhhccccCcchHHHhhhhhHHHHHHHHHhhcCccchhhHH
Q 026668 132 SPSTDAEVALALRVLEGCCLLHRESAILAHKHKAIKILMNILSTRGALEQGACL 185 (235)
Q Consensus 132 sp~Td~EvaLALrVLEGcCLlh~~s~~~ah~~~av~VlldlL~arg~leq~acL 185 (235)
+|+.|+..-+| +||.| |+.-.++..+|..|-+++-...|..+.-||
T Consensus 32 ~~s~~~~F~yA------w~Lv~--S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~l 77 (126)
T 1nzn_A 32 SVSKSTQFEYA------WCLVR--TRYNDDIRKGIVLLEELLPKGSKEEQRDYV 77 (126)
T ss_dssp CCCHHHHHHHH------HHHTT--SSSHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCcHHHHHHHH------HHHHc--CCCHHHHHHHHHHHHHHHhcCCcchHHHHH
Confidence 45666655554 68888 566678889999999988875455565554
No 47
>3l7h_A RE64145P, roadblock; LC7, KM23, dynein, light chain, hydrolase, protei transport; 1.95A {Drosophila melanogaster} SCOP: d.110.7.1 PDB: 3l9k_A 1z09_A 2e8j_A 1y4o_A
Probab=20.23 E-value=42 Score=25.38 Aligned_cols=27 Identities=30% Similarity=0.544 Sum_probs=16.8
Q ss_pred HHHHHHHHHHhhhh--hhcccchhHHhhc
Q 026668 40 VQREITLALRTGLR--DARAEFSFLRVRG 66 (235)
Q Consensus 40 ~yRevtlaLr~gLR--Da~AeFSFlR~rg 66 (235)
++.+++-.-|..+| |..-|+.|||+|.
T Consensus 46 ~~~~L~~~a~~~vrdlDp~del~fLRiRT 74 (97)
T 3l7h_A 46 LMSQLADKARSVVRDLDPSNDMTFLRVRS 74 (97)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEEEe
Confidence 33333334444444 5668999999985
Done!