Query 026678
Match_columns 235
No_of_seqs 200 out of 954
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 19:25:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026678.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026678hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i3q_A Alpha-ketoglutarate-dep 100.0 2.1E-32 7.1E-37 236.9 15.0 139 86-226 45-184 (211)
2 3s57_A Alpha-ketoglutarate-dep 99.9 2.4E-27 8.3E-32 203.7 11.5 124 93-225 54-188 (204)
3 3tht_A Alkylated DNA repair pr 99.9 8.7E-27 3E-31 214.7 10.7 131 92-228 145-278 (345)
4 2iuw_A Alkylated repair protei 99.9 1.5E-26 5.1E-31 202.9 10.0 121 94-224 82-214 (238)
5 3lfm_A Protein FTO; FAT MASS a 96.1 0.0059 2E-07 57.9 5.4 76 145-221 188-299 (495)
6 2jig_A Prolyl-4 hydroxylase; h 75.7 5.2 0.00018 33.2 6.1 109 124-234 77-215 (224)
7 4gjz_A Lysine-specific demethy 68.3 6.9 0.00024 31.7 5.1 78 149-234 124-234 (235)
8 2rdq_A 1-deoxypentalenic acid 65.7 6.5 0.00022 33.3 4.5 23 197-222 210-232 (288)
9 2opw_A Phyhd1 protein; double- 63.4 13 0.00046 31.4 6.1 33 197-232 227-260 (291)
10 2fct_A Syringomycin biosynthes 61.4 35 0.0012 29.1 8.5 34 197-233 219-255 (313)
11 3dkq_A PKHD-type hydroxylase S 55.2 9.8 0.00033 32.7 3.8 80 147-234 99-193 (243)
12 3itq_A Prolyl 4-hydroxylase, a 53.2 21 0.00074 29.9 5.5 103 123-234 89-210 (216)
13 2hbt_A EGL nine homolog 1; pro 46.1 68 0.0023 27.1 7.7 79 149-234 119-211 (247)
14 2rg4_A Uncharacterized protein 43.5 1.1E+02 0.0037 25.2 8.4 77 145-226 101-194 (216)
15 3al5_A HTYW5, JMJC domain-cont 42.8 29 0.001 30.7 5.0 71 156-234 176-273 (338)
16 2xdv_A MYC-induced nuclear ant 41.5 73 0.0025 29.6 7.7 86 122-224 121-222 (442)
17 4diq_A Lysine-specific demethy 38.8 1.2E+02 0.004 28.8 8.7 90 123-228 146-255 (489)
18 3gja_A CYTC3; halogenase, beta 33.3 87 0.003 27.2 6.5 33 197-232 221-256 (319)
19 3lwc_A Uncharacterized protein 31.8 66 0.0023 23.8 4.8 59 147-220 41-99 (119)
20 1vrb_A Putative asparaginyl hy 28.5 2.3E+02 0.008 24.9 8.6 26 196-224 216-241 (342)
21 2a1x_A Phytanoyl-COA dioxygena 25.5 63 0.0022 27.5 4.1 34 196-232 214-248 (308)
22 3kt7_A PKHD-type hydroxylase T 23.8 1.9E+02 0.0064 28.4 7.4 85 145-234 123-226 (633)
23 3fjs_A Uncharacterized protein 22.6 1.7E+02 0.0057 21.0 5.5 59 150-221 39-97 (114)
24 3m9b_A Proteasome-associated A 21.4 54 0.0019 28.5 2.8 30 201-230 213-242 (251)
25 3h8u_A Uncharacterized conserv 21.3 2.2E+02 0.0076 20.1 6.7 59 151-221 43-102 (125)
26 1svq_A Severin; actin-binding; 21.2 72 0.0025 23.6 3.2 37 183-220 13-55 (114)
27 2ozj_A Cupin 2, conserved barr 20.5 2.2E+02 0.0076 19.8 5.8 55 154-221 45-99 (114)
No 1
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=100.00 E-value=2.1e-32 Score=236.93 Aligned_cols=139 Identities=33% Similarity=0.518 Sum_probs=120.3
Q ss_pred cccchh-hccceeeEeeeCceeeeCCCcccCCCCCCCChHHHHHHHHHHHhccCCCCCCCCCceEEeeecCCCCCcCccc
Q 026678 86 KSVKAG-VLLRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHL 164 (235)
Q Consensus 86 ~~~~~~-~ll~klRW~tlG~~Ydw~~~~Y~~~~~~~~~P~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~Gd~lg~H~ 164 (235)
+.++.+ ....+|.|++-+..|.|++..+....++++||++|.+|+++++..+ ++..|.||+||||+|++|++|+||+
T Consensus 45 ~~~s~~~~~~g~~~W~~d~~~Y~Ys~~~~~~~~pw~~~P~~L~~l~~~~~~~~--g~~~~~pn~~LvN~Y~~G~~i~~H~ 122 (211)
T 3i3q_A 45 YTMSVAMTNCGHLGWTTHRQGYLYSPIDPQTNKPWPAMPQSFHNLCQRAATAA--GYPDFQPDACLINRYAPGAKLSLHQ 122 (211)
T ss_dssp CBCSSEEEEESSBEEEEETTEEEEESBCTTTSSBCCCCCHHHHHHHHHHHHHT--TCTTCCCCEEEEEEECTTCCEEEEC
T ss_pred CcCchhhcccccceeecCCCCcCcCCCccCCCCCCCchHHHHHHHHHHHHHhc--CCCCcCCCEEEEEEEcCCCCccccc
Confidence 345554 4567899999888899998875555689999999999999998765 4457899999999999999999999
Q ss_pred CCCCcCCCCCeEEEccCCceEEEeeCCCCCCCCEEEEcCCCcEEEEcccccceeeccCCCCC
Q 026678 165 DDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGECVLPG 226 (235)
Q Consensus 165 D~~E~~~~~PIvSiSLG~~~iF~~~~~~~~~~~~~l~L~sGDvlvM~G~sR~~~H~VP~~~~ 226 (235)
|+.|.+++.||+|||||++|+|.|+++++++....+.|++||+|||+|++|+|+||||+.+.
T Consensus 123 D~~e~~~~~pI~svSLG~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r~~~H~I~~~~~ 184 (211)
T 3i3q_A 123 DKDEPDLRAPIVSVSLGLPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKA 184 (211)
T ss_dssp CCCCSCTTSCEEEEEEESCEEEEECCSSTTSCCEEEEECTTCEEEECGGGTTCCEEECCCCC
T ss_pred CCCccccCCCEEEEECCCCeEEEEecccCCCceEEEECCCCCEEEECchHHceEeccCcccC
Confidence 96565577899999999999999999877778899999999999999999998899997664
No 2
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=99.94 E-value=2.4e-27 Score=203.70 Aligned_cols=124 Identities=21% Similarity=0.259 Sum_probs=103.9
Q ss_pred ccceeeEee-eCceeeeCCCcccCCCCCCCChHHHHHHHHHHHhccCCCCCCCCCceEEeeecCCC-CCcCcccCCCC-c
Q 026678 93 LLRKLRWCT-LGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLG-DTLGGHLDDME-A 169 (235)
Q Consensus 93 ll~klRW~t-lG~~Ydw~~~~Y~~~~~~~~~P~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~G-d~lg~H~D~~E-~ 169 (235)
..|+..|.+ -|..|+|+.+.+.. .+||++|..|++++++.+ ++.||+||||+|++| |+||||+|+++ .
T Consensus 54 ~pR~~~wyg~~~~~Y~Ysg~~~~~----~pwp~~L~~l~~~~~~~~-----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~~ 124 (204)
T 3s57_A 54 VPRKQATYGDAGLTYTFSGLTLSP----KPWIPVLERIRDHVSGVT-----GQTFNFVLINRYKDGSDHICEHRDDEREL 124 (204)
T ss_dssp CSSEEEEEECTTCCEEETTEEECC----EECCHHHHHHHHHHHHHH-----CCCCSEEEEEEESSTTCCEEEECCCCTTB
T ss_pred cCcEEEEECCCCCCcccCCCcccC----CCCCHHHHHHHHHHHHHh-----CCCCceeEEEEECCCCCcccceecChhhc
Confidence 346778887 45789999988742 488999999999997765 578999999999999 59999999954 3
Q ss_pred CCCCCeEEEccCCceEEEeeCCC-------CCCCCEEEEcCCCcEEEEcccccc-eeeccCCCC
Q 026678 170 DWSKPIVSMSLGCKAIFLLGGKS-------REDPPLAMFLRSGDAVLMAGEARE-CFHGECVLP 225 (235)
Q Consensus 170 ~~~~PIvSiSLG~~~iF~~~~~~-------~~~~~~~l~L~sGDvlvM~G~sR~-~~H~VP~~~ 225 (235)
+.+.+|+|||||++|+|.|+++. +......+.|++||+|||+|++|. |+||||+.+
T Consensus 125 ~~~~~IasvSLG~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~~q~~w~H~Ip~~~ 188 (204)
T 3s57_A 125 APGSPIASVSFGASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHPTNTHWYHSLPVRK 188 (204)
T ss_dssp CTTCCEEEEEEESCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETTHHHHEEEEECCCT
T ss_pred cCCCcEEEEECCCceEEEEEEcCCCccccccCCceEEEECCCCCEEEECchhhheeEeeccccC
Confidence 46789999999999999999753 223578999999999999999988 559999766
No 3
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=99.94 E-value=8.7e-27 Score=214.72 Aligned_cols=131 Identities=21% Similarity=0.351 Sum_probs=94.4
Q ss_pred hccceeeEeeeCceeeeCCCcccCCCCC-CCChHHHHHHHHHHHhccCCCCCCCCCceEEeeecCCCCCcCcccCCCCcC
Q 026678 92 VLLRKLRWCTLGLQFDWSKRNYNVSLPH-KKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD 170 (235)
Q Consensus 92 ~ll~klRW~tlG~~Ydw~~~~Y~~~~~~-~~~P~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~Gd~lg~H~D~~E~~ 170 (235)
..+.++|++.+|+.|+|+++.+....++ .+||++|..|++++++.. ..++.||+||||+|++|++|+||+|+++.
T Consensus 145 ~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~p~~~P~~L~~l~~r~~~~~---~~~~~~n~~lvN~Y~~G~~I~~H~D~~~~- 220 (345)
T 3tht_A 145 KSLKHRRVKHFGYEFHYENNNVDKDKPLSGGLPDICESFLEKWLRKG---YIKHKPDQMTINQYEPGQGIPAHIDTHSA- 220 (345)
T ss_dssp -----CEEECCC------------------CCCHHHHHHHHHHHHHT---SCSSCCSEEEEEEECTTCCEEEECCCTTT-
T ss_pred ccccCceEEEECCcccccccccccCCCCCcCcCHHHHHHHHHHHhcc---cCCCCCCEEEEEEecCCCCEeeccCCchh-
Confidence 4455677788999999999988755554 479999999999987532 23689999999999999999999999765
Q ss_pred CCCCeEEEccCCceEEEeeCCCCCCCCEEEEcCCCcEEEEccccccee-eccCCC-CCcc
Q 026678 171 WSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECF-HGECVL-PGNF 228 (235)
Q Consensus 171 ~~~PIvSiSLG~~~iF~~~~~~~~~~~~~l~L~sGDvlvM~G~sR~~~-H~VP~~-~~~~ 228 (235)
++.||+|||||++|+|.|+++. ....++.|++||+|||+|++|+.| ||||++ ++++
T Consensus 221 ~~~~I~slSLG~~~~f~f~~~~--~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~ 278 (345)
T 3tht_A 221 FEDEIVSLSLGSEIVMDFKHPD--GIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTV 278 (345)
T ss_dssp BCSCEEEEEESSCEEEEEECTT--SCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEE
T ss_pred cCCeEEEEECCCceeEEEccCC--CceEEEEcCCCcEEEEChHHhhceEccCCcccCCcc
Confidence 6789999999999999999863 457899999999999999999877 999954 4444
No 4
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=99.93 E-value=1.5e-26 Score=202.87 Aligned_cols=121 Identities=20% Similarity=0.293 Sum_probs=98.5
Q ss_pred cceeeEeeeCceeeeCCCcccCCCCCCCChHHHHHHHHHHHhccCCCCCCCCCceEEeeecCCC-CCcCcccCCCCcCCC
Q 026678 94 LRKLRWCTLGLQFDWSKRNYNVSLPHKKIPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLG-DTLGGHLDDMEADWS 172 (235)
Q Consensus 94 l~klRW~tlG~~Ydw~~~~Y~~~~~~~~~P~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~G-d~lg~H~D~~E~~~~ 172 (235)
.|...|.+ ++.|+|+...+. +.++||++|..|++++++.+ +..||+||||+|++| |+|+||+|+++. ++
T Consensus 82 ~R~~~~~g-~~~Y~Ys~~~~~---~~p~wp~~l~~l~~~~~~~~-----g~~~n~~LvN~Y~~G~d~i~~H~D~~~~-~~ 151 (238)
T 2iuw_A 82 PRLTAWYG-ELPYTYSRITME---PNPHWHPVLRTLKNRIEENT-----GHTFNSLLCNLYRNEKDSVDWHSDDEPS-LG 151 (238)
T ss_dssp SSEEEEEE-CCCTTSCHHHHC---CBSSCCHHHHHHHHHHHHHH-----SCCCCEEEEEEECSTTCCEEEECCCCGG-GC
T ss_pred CCeeEEcC-CCccccCCcccC---CCCCCCHHHHHHHHHHHHHh-----CCCCCEEEEEEECCCCCceeCCcCChhh-cC
Confidence 34556765 366777766553 23589999999999987765 468999999999999 699999999643 44
Q ss_pred --CCeEEEccCCceEEEeeCCCCC--------CCCEEEEcCCCcEEEEccccccee-eccCCC
Q 026678 173 --KPIVSMSLGCKAIFLLGGKSRE--------DPPLAMFLRSGDAVLMAGEARECF-HGECVL 224 (235)
Q Consensus 173 --~PIvSiSLG~~~iF~~~~~~~~--------~~~~~l~L~sGDvlvM~G~sR~~~-H~VP~~ 224 (235)
.+|+|||||++|+|.|+++.+. ...+.|.|++||+|||+|++|..| ||||+.
T Consensus 152 ~~~~IaslSLG~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~ 214 (238)
T 2iuw_A 152 RCPIIASLSFGATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIMEGATQADWQHRVPKE 214 (238)
T ss_dssp SSCCEEEEEEESCEEEEEEECCC--------CCCEEEEEECTTCEEEEEETHHHHEEEEECCC
T ss_pred CCCcEEEEECCCCEEEEEeccCCccccCcccCCceEEEEcCCCCEEEEChhhhCccEecCCCc
Confidence 7899999999999999986542 357899999999999999998765 999975
No 5
>3lfm_A Protein FTO; FAT MASS and obesity associated (FTO) protein, Fe2+/2-oxoGlu (2-OG)-dependent oxidative DNA/RNA demethylases, oxidoreduc; HET: 3DT OGA; 2.50A {Homo sapiens}
Probab=96.11 E-value=0.0059 Score=57.87 Aligned_cols=76 Identities=24% Similarity=0.330 Sum_probs=48.6
Q ss_pred CCceEEeeecCC--------------C-CCcCcccCCCCcCCCCCeEEEccCC-----------------ceEEEeeCC-
Q 026678 145 QPEAAIVNYFGL--------------G-DTLGGHLDDMEADWSKPIVSMSLGC-----------------KAIFLLGGK- 191 (235)
Q Consensus 145 ~p~a~iVN~Y~~--------------G-d~lg~H~D~~E~~~~~PIvSiSLG~-----------------~~iF~~~~~- 191 (235)
.+|..||||+.+ | -.+|||.|..=. -..+|+-.|.-| +++..+|=+
T Consensus 188 ~fNvTLlN~Mdp~~m~~LKeEpyfgMGKmaVsWHhDenL~-~~StVAVY~~sc~~~~~~~~~~~~~~~~d~~~W~Vglki 266 (495)
T 3lfm_A 188 AYNVTLLNFMDPQKMPYLKEEPYFGMGKMAVSWHHDENLV-DRSAVAVYSYSCEGPEEESEDDSHLEGRDPDIWHVGFKI 266 (495)
T ss_dssp CCCEEEEEEECSSCSSSCCBCSSSCCCBEEEEEECCCSBC-TTCCEEEEEEECCC-------------CCTTSEEEEEEE
T ss_pred eeehhhhhccCcccccccccccccCCcceeeeeccccccc-cCcceEEEEeecCCccccccccccCCCCCccceeEeeee
Confidence 789999999876 3 458999996432 235665444322 233444322
Q ss_pred --CCCCCCEEEEcCCCcEEEEcccc-cceeecc
Q 026678 192 --SREDPPLAMFLRSGDAVLMAGEA-RECFHGE 221 (235)
Q Consensus 192 --~~~~~~~~l~L~sGDvlvM~G~s-R~~~H~V 221 (235)
.-..+.+.|.|++||...|-+.- ..+.|+|
T Consensus 267 awDi~tP~L~vpL~sgd~Y~Mldd~N~~HqH~V 299 (495)
T 3lfm_A 267 SWDIETPGLAIPLHQGDCYFMLDDLNATHQHCV 299 (495)
T ss_dssp TTCCSSCEEEEEECTTCEEEECTTHHHHEEEEE
T ss_pred cccCCCCceeeecCCCCeeeecchhhhhhhhhh
Confidence 22346889999999999986554 4444444
No 6
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=75.68 E-value=5.2 Score=33.23 Aligned_cols=109 Identities=22% Similarity=0.337 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHhccCCCCCCCCCceEEeeecCCCCCcCcccCCCCcC-------CCCCeEEEcc-------CCceEEEee
Q 026678 124 DALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD-------WSKPIVSMSL-------GCKAIFLLG 189 (235)
Q Consensus 124 ~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~Gd~lg~H~D~~E~~-------~~~PIvSiSL-------G~~~iF~~~ 189 (235)
+.+..|.++|.... +..-...+...|+.|..|+.-.+|.|..... .+.-++++-| |..-+|-..
T Consensus 77 ~~~~~i~~ri~~~~--gl~~~~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~ 154 (224)
T 2jig_A 77 SVISKIEKRVAQVT--MIPLENHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNA 154 (224)
T ss_dssp HHHHHHHHHHHHHH--TCCGGGBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTS
T ss_pred HHHHHHHHHHHHHh--CCCcccccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCc
Confidence 34677777776654 2221234567888999999999999974321 1122444332 333344211
Q ss_pred C-CCC-------CCCCEEEEcCCCcEEEEc-----ccc-cceeeccC-CCCC-cceeeeee
Q 026678 190 G-KSR-------EDPPLAMFLRSGDAVLMA-----GEA-RECFHGEC-VLPG-NFIIMIWC 234 (235)
Q Consensus 190 ~-~~~-------~~~~~~l~L~sGDvlvM~-----G~s-R~~~H~VP-~~~~-~~~~~~~~ 234 (235)
. ... ....++|..+.|++|++- |.. ...+|++- .+.| .+.+..|.
T Consensus 155 ~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi 215 (224)
T 2jig_A 155 EQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWI 215 (224)
T ss_dssp SSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEE
T ss_pred ccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeE
Confidence 0 000 012578999999999994 444 56778885 4443 45556663
No 7
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=68.28 E-value=6.9 Score=31.65 Aligned_cols=78 Identities=21% Similarity=0.295 Sum_probs=51.4
Q ss_pred EEeeecC-C-CCCcCcccCCCCcCCCCCeEEEccCCceEEEeeCCC-------------------------------CCC
Q 026678 149 AIVNYFG-L-GDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS-------------------------------RED 195 (235)
Q Consensus 149 ~iVN~Y~-~-Gd~lg~H~D~~E~~~~~PIvSiSLG~~~iF~~~~~~-------------------------------~~~ 195 (235)
.-+|.|- + |..-..|.|..+ -++..=-|..+..++-+.. ++.
T Consensus 124 ~~~~~wiG~~gs~t~~H~D~~~-----n~~~qv~G~K~w~L~pP~~~~~l~~~~~~~~~~~s~vd~~~~d~~~~p~~~~~ 198 (235)
T 4gjz_A 124 ITINAWFGPQGTISPLHQDPQQ-----NFLVQVMGRKYIRLYSPQESGALYPHDTHLLHNTSQVDVENPDLEKFPKFAKA 198 (235)
T ss_dssp CEEEEEEECTTCEEEEECCSSE-----EEEEEEESCEEEEEECGGGGGGSCBCSSTTTTTBBSSCTTSCCTTTCGGGGGC
T ss_pred cceEEEEeCCCCCceeeecccc-----ceEEEEeeeEeeEEcCcccccccccCcccccCccccccccCcchhhCccccCC
Confidence 3456553 3 355667999743 1444455877777764321 011
Q ss_pred CCEEEEcCCCcEEEEcccccceeeccCCCCCcceeeeee
Q 026678 196 PPLAMFLRSGDAVLMAGEARECFHGECVLPGNFIIMIWC 234 (235)
Q Consensus 196 ~~~~l~L~sGDvlvM~G~sR~~~H~VP~~~~~~~~~~~~ 234 (235)
....+.|++||+|.+= +.|||.|--+-.+..+-+|-
T Consensus 199 ~~~~~~l~pGD~LyiP---~gW~H~V~~l~~sisvn~w~ 234 (235)
T 4gjz_A 199 PFLSCILSPGEILFIP---VKYWHYVRALDLSFSVSFWW 234 (235)
T ss_dssp CCEEEEECTTCEEEEC---TTCEEEEEESSSEEEEEEEE
T ss_pred CcEEEEECCCCEEEeC---CCCcEEEEECCCEEEEEEec
Confidence 3568899999999994 46899998777777777773
No 8
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=65.66 E-value=6.5 Score=33.31 Aligned_cols=23 Identities=22% Similarity=0.286 Sum_probs=18.1
Q ss_pred CEEEEcCCCcEEEEcccccceeeccC
Q 026678 197 PLAMFLRSGDAVLMAGEARECFHGEC 222 (235)
Q Consensus 197 ~~~l~L~sGDvlvM~G~sR~~~H~VP 222 (235)
.+.+.++.||++||.+. .+||-.
T Consensus 210 ~v~~~~~aGdv~lf~~~---~~H~s~ 232 (288)
T 2rdq_A 210 LLHSPMEPGDILLFHAH---MCHKSI 232 (288)
T ss_dssp EECCCCCTTCEEEEETT---CCEEEE
T ss_pred eeecccCCCCEEEEeCC---ceecCC
Confidence 35778899999999994 667654
No 9
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=63.38 E-value=13 Score=31.43 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=23.0
Q ss_pred CEEEEcCCCcEEEEcccccceeeccC-CCCCcceeee
Q 026678 197 PLAMFLRSGDAVLMAGEARECFHGEC-VLPGNFIIMI 232 (235)
Q Consensus 197 ~~~l~L~sGDvlvM~G~sR~~~H~VP-~~~~~~~~~~ 232 (235)
.+.+.++.||++|+.+. .+||.. -..+..|.++
T Consensus 227 ~v~~~~~aGd~~~f~~~---~~H~s~~N~s~~~R~~~ 260 (291)
T 2opw_A 227 FVPTPVQRGALVLIHGE---VVHKSKQNLSDRSRQAY 260 (291)
T ss_dssp CEEECBCTTCEEEEETT---CEEEECCBCSSSCCCEE
T ss_pred eeecccCCCcEEEEcCC---ceecCCCCCCCCceEEE
Confidence 57789999999999995 667764 3333445443
No 10
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=61.39 E-value=35 Score=29.10 Aligned_cols=34 Identities=9% Similarity=0.180 Sum_probs=25.7
Q ss_pred CEEEEcCCCcEEEEcccccceeeccC-CC--CCcceeeee
Q 026678 197 PLAMFLRSGDAVLMAGEARECFHGEC-VL--PGNFIIMIW 233 (235)
Q Consensus 197 ~~~l~L~sGDvlvM~G~sR~~~H~VP-~~--~~~~~~~~~ 233 (235)
.+.+.++.||++++.+. .+||-. -. .+..|.++-
T Consensus 219 ~v~~~~~aGd~v~f~~~---l~H~s~~N~~ss~~~R~a~~ 255 (313)
T 2fct_A 219 AVPMQMKAGQFIIFWST---LMHASYPHSGESQEMRMGFA 255 (313)
T ss_dssp CEEECBCTTEEEEEETT---SEEEECCBCSSSSSCEEEEE
T ss_pred eeEeeeCCceEEEEeCC---ceeeCCCCCCCCCCceEEEE
Confidence 46889999999999994 677765 44 566676664
No 11
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=55.17 E-value=9.8 Score=32.74 Aligned_cols=80 Identities=19% Similarity=0.262 Sum_probs=48.9
Q ss_pred ceEEeeecCCCCCcCcccCCCCcCC-C---CCeEEE----cc-----CCceEEEeeCCCCCCCCEEEEcCCCcEEEEccc
Q 026678 147 EAAIVNYFGLGDTLGGHLDDMEADW-S---KPIVSM----SL-----GCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGE 213 (235)
Q Consensus 147 ~a~iVN~Y~~Gd~lg~H~D~~E~~~-~---~PIvSi----SL-----G~~~iF~~~~~~~~~~~~~l~L~sGDvlvM~G~ 213 (235)
+...++.|..|+..++|.|...... + .-++|+ |= |..-+|.-. .....+..+.|++|++...
T Consensus 99 e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~-----~~~~~V~P~~G~~v~F~s~ 173 (243)
T 3dkq_A 99 YPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDT-----YGQQSIKLSAGSLVLYPSS 173 (243)
T ss_dssp EEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEET-----TEEEEECCCTTCEEEEETT
T ss_pred ccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeC-----CCcEEEecCCCEEEEECCC
Confidence 3488999999999999999853211 0 112222 21 122222110 1146788999999999754
Q ss_pred ccceeeccCCC-C-Ccceeeeee
Q 026678 214 ARECFHGECVL-P-GNFIIMIWC 234 (235)
Q Consensus 214 sR~~~H~VP~~-~-~~~~~~~~~ 234 (235)
..|+|..+ . ..+.+..|.
T Consensus 174 ---~lH~v~pV~~G~R~~~~~Wi 193 (243)
T 3dkq_A 174 ---SLHQVTPVLSGERTAAFMWL 193 (243)
T ss_dssp ---SEEEECCEEEECEEEEEEEE
T ss_pred ---CeEcCccccccCEEEEEEeh
Confidence 46999643 3 456666774
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=53.22 E-value=21 Score=29.89 Aligned_cols=103 Identities=18% Similarity=0.279 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHhccCCCCCCCCCceEEeeecCCCCCcCcccCCCCcC----CCCCeEEEcc-------CCceEEEeeCC
Q 026678 123 PDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLGDTLGGHLDDMEAD----WSKPIVSMSL-------GCKAIFLLGGK 191 (235)
Q Consensus 123 P~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~Gd~lg~H~D~~E~~----~~~PIvSiSL-------G~~~iF~~~~~ 191 (235)
.+.+..|.++++...+ ..-...+..-|..|..|+.-.+|.|..... .+.-++++-| |..-+|-
T Consensus 89 ~~~v~~i~~Ri~~~~g--l~~~~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp---- 162 (216)
T 3itq_A 89 NELTAKIEKRISSIMN--VPASHGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFP---- 162 (216)
T ss_dssp CHHHHHHHHHHHHHHT--SCGGGBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEET----
T ss_pred cHHHHHHHHHHHHhcC--ceeccccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEec----
Confidence 4567778888876552 211234667888899999999999975321 1112333322 2222221
Q ss_pred CCCCCCEEEEcCCCcEEEEccc-----c-cceeeccC-CCCC-cceeeeee
Q 026678 192 SREDPPLAMFLRSGDAVLMAGE-----A-RECFHGEC-VLPG-NFIIMIWC 234 (235)
Q Consensus 192 ~~~~~~~~l~L~sGDvlvM~G~-----s-R~~~H~VP-~~~~-~~~~~~~~ 234 (235)
...+++..+.|++|++-.- . ....|++- .+.| .+.+..|.
T Consensus 163 ---~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~ 210 (216)
T 3itq_A 163 ---KLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQWV 210 (216)
T ss_dssp ---TTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEEE
T ss_pred ---CCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEeeE
Confidence 1247888999999999742 2 34568874 5554 46666674
No 13
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=46.09 E-value=68 Score=27.13 Aligned_cols=79 Identities=16% Similarity=0.203 Sum_probs=48.6
Q ss_pred EEeeecCC-CCCcCcccCCCCcCCCCCeEEEcc-----------CCc-eEEEeeCCCCCCCCEEEEcCCCcEEEEccccc
Q 026678 149 AIVNYFGL-GDTLGGHLDDMEADWSKPIVSMSL-----------GCK-AIFLLGGKSREDPPLAMFLRSGDAVLMAGEAR 215 (235)
Q Consensus 149 ~iVN~Y~~-Gd~lg~H~D~~E~~~~~PIvSiSL-----------G~~-~iF~~~~~~~~~~~~~l~L~sGDvlvM~G~sR 215 (235)
+-+..|.+ |+...+|.|... .+.-.+|+-| |.. ++| .. .+.....|.-..|.+++|... +
T Consensus 119 ~~~~~Y~~~G~~y~~H~D~~~--~~~R~~T~vlYLN~~w~~~~~GG~l~~~---~~-~~~~~~~v~P~~grlv~F~s~-~ 191 (247)
T 2hbt_A 119 AMVACYPGNGTGYVRHVDNPN--GDGRCVTCIYYLNKDWDAKVSGGILRIF---PE-GKAQFADIEPKFDRLLFFWSD-R 191 (247)
T ss_dssp EEEEEECSSSCCEEEECSSCS--CCSEEEEEEEECBTTCCHHHHBCCEEEC---CT-TCSSCEEECCBTTEEEEEECS-T
T ss_pred EEEEEecCCCCcccccccCCC--CCCceEEEEEEeCCCCCCCCCceeEEEe---cC-CCCceEEEEcCCCEEEEEecC-C
Confidence 56778885 999999999832 1111232222 222 222 11 123456888899999999743 3
Q ss_pred ceeeccC-CCCCcceeeeee
Q 026678 216 ECFHGEC-VLPGNFIIMIWC 234 (235)
Q Consensus 216 ~~~H~VP-~~~~~~~~~~~~ 234 (235)
..+|+|- ....-+.|..|.
T Consensus 192 ~~~H~V~p~~~~R~sit~W~ 211 (247)
T 2hbt_A 192 RNPHEVQPAYATRYAITVWY 211 (247)
T ss_dssp TCCEEECCBSSCEEEEEEEE
T ss_pred CceeeeccCCCEEEEEEEEE
Confidence 3689985 445667888885
No 14
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=43.54 E-value=1.1e+02 Score=25.23 Aligned_cols=77 Identities=16% Similarity=0.154 Sum_probs=45.1
Q ss_pred CCceEEeeecCCCCCcCcccCCCCcCCCCCeEEEccCC-ceEEEeeCCC----------CCC-----CC-EEEEcCCCcE
Q 026678 145 QPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGC-KAIFLLGGKS----------RED-----PP-LAMFLRSGDA 207 (235)
Q Consensus 145 ~p~a~iVN~Y~~Gd~lg~H~D~~E~~~~~PIvSiSLG~-~~iF~~~~~~----------~~~-----~~-~~l~L~sGDv 207 (235)
....+=+|.|+.|+.-..|.|..-. . +.++=|+... ..-+.|.... ..+ .+ ..+.-+.|++
T Consensus 101 ~i~~~W~~~~~~G~~~~~H~H~~~~-l-SgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~l 178 (216)
T 2rg4_A 101 RLEDIWINILPEGGVHGSHIHPHSV-I-SGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDV 178 (216)
T ss_dssp EEEEEEEEEECTTCCEEEECCTTCS-E-EEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEE
T ss_pred EEeeEEEEEcCCCCcccCccCCCCe-E-EEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeE
Confidence 3346788999999999999994211 1 2233333321 1122222210 001 12 3677899999
Q ss_pred EEEcccccceeeccCCCCC
Q 026678 208 VLMAGEARECFHGECVLPG 226 (235)
Q Consensus 208 lvM~G~sR~~~H~VP~~~~ 226 (235)
||+ +|. -+|+|+...+
T Consensus 179 vlF--pS~-l~H~V~p~~~ 194 (216)
T 2rg4_A 179 LLW--ESW-LRHEVPMNMA 194 (216)
T ss_dssp EEE--ETT-SCEEECCCCS
T ss_pred EEE--CCC-CEEeccCCCC
Confidence 999 455 6799986443
No 15
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=42.76 E-value=29 Score=30.69 Aligned_cols=71 Identities=20% Similarity=0.231 Sum_probs=47.5
Q ss_pred CCCCcCcccCCCCcCCCCCeEEEccCCceEEEeeCCC---------------------------CCCCCEEEEcCCCcEE
Q 026678 156 LGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS---------------------------REDPPLAMFLRSGDAV 208 (235)
Q Consensus 156 ~Gd~lg~H~D~~E~~~~~PIvSiSLG~~~iF~~~~~~---------------------------~~~~~~~l~L~sGDvl 208 (235)
.|.+.+.|.|..+ -+...=-|..+..++.+.. +......+.|++||+|
T Consensus 176 ~g~~~~~H~D~~~-----n~~~qv~G~K~w~L~pP~~~~~ly~~~~~~~~~d~~~~d~~~~p~~~~~~~~~~~L~pGD~L 250 (338)
T 3al5_A 176 PGLQLWTHYDVMD-----NLLIQVTGKKRVVLFSPRDAQYLYLKGTKSEVLNIDNPDLAKYPLFSKARRYECSLEAGDVL 250 (338)
T ss_dssp TTCEEEEECCSSE-----EEEEECSSCEEEEEECGGGGGGGTEETTEESCCCSSSCCTTTCTTGGGCCEEEEEECTTCEE
T ss_pred CCCCccceECCcc-----cEEEEEEEEEEEEEECcccccccccCCCCcccccCCCcchhhCcccccCCCEEEEECCCCEE
Confidence 4577889999753 1333444666665554310 0012578999999999
Q ss_pred EEcccccceeeccCCCCCcceeeeee
Q 026678 209 LMAGEARECFHGECVLPGNFIIMIWC 234 (235)
Q Consensus 209 vM~G~sR~~~H~VP~~~~~~~~~~~~ 234 (235)
.+= +.|||.|--+..++.+-+|.
T Consensus 251 yiP---~gWwH~v~~l~~sisvn~~~ 273 (338)
T 3al5_A 251 FIP---ALWFHNVISEEFGVGVNIFW 273 (338)
T ss_dssp EEC---TTCEEEEEESSCEEEEEEEE
T ss_pred EEC---CCCeEEEeeCCCEEEEEEEe
Confidence 986 35889998777788887764
No 16
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=41.49 E-value=73 Score=29.57 Aligned_cols=86 Identities=20% Similarity=0.201 Sum_probs=48.6
Q ss_pred ChHHHHHHHHHHHhccCCCCCCCCCceEEeeecCCC-CCcC--cccCCCCcCCCCCeEEEccCCceEEEeeCCC------
Q 026678 122 IPDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGLG-DTLG--GHLDDMEADWSKPIVSMSLGCKAIFLLGGKS------ 192 (235)
Q Consensus 122 ~P~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~G-d~lg--~H~D~~E~~~~~PIvSiSLG~~~iF~~~~~~------ 192 (235)
+|+ |..+++.+++.. ++ .+.+|.|-.. .+.| .|.|..+. ++.-=-|..+.-++....
T Consensus 121 ~p~-L~~l~~~l~~~~-----g~---~~~~n~y~~~~g~~g~~~H~D~~dv-----f~~Qv~G~Krw~l~~p~~pl~~~~ 186 (442)
T 2xdv_A 121 KDE-LWRIQEKLECYF-----GS---LVGSNVYITPAGSQGLPPHYDDVEV-----FILQLEGEKHWRLYHPTVPLAREY 186 (442)
T ss_dssp CHH-HHHHHHHHHHHH-----TS---CCEEEEEEECTTCBCSCSEECSSEE-----EEEEEESCEEEEEECCSSTTCSSC
T ss_pred hhH-HHHHHHHHHHHh-----CC---CcccceEECCCCCCCccceECCcce-----EEEEEEeEEEEEEccCCCCccccC
Confidence 444 557777776544 22 3457877654 5555 99996532 222223444433333221
Q ss_pred -------CCCCCEEEEcCCCcEEEEcccccceeeccCCC
Q 026678 193 -------REDPPLAMFLRSGDAVLMAGEARECFHGECVL 224 (235)
Q Consensus 193 -------~~~~~~~l~L~sGDvlvM~G~sR~~~H~VP~~ 224 (235)
-......+.|++||+|.|= |.|||.+--.
T Consensus 187 s~d~~~~~~~~~~~~~L~pGD~LYiP---~g~~H~~~s~ 222 (442)
T 2xdv_A 187 SVEAEERIGRPVHEFMLKPGDLLYFP---RGTIHQADTP 222 (442)
T ss_dssp EECCTTTSCSCSEEEEECTTCEEEEC---TTCEEEEECC
T ss_pred CCCchhhcCCcceEEEECCCcEEEEC---CCceEEEEec
Confidence 0123568899999999884 5566665433
No 17
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=38.83 E-value=1.2e+02 Score=28.82 Aligned_cols=90 Identities=22% Similarity=0.217 Sum_probs=50.8
Q ss_pred hHHHHHHHHHHHhccCCCCCCCCCceEEeeecCC-C--CCcCcccCCCCcCCCCCeEEEccCCceEEEeeCCC-------
Q 026678 123 PDALCQLAKRLAAPAMPIGEEFQPEAAIVNYFGL-G--DTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKS------- 192 (235)
Q Consensus 123 P~~L~~L~~~~~~~~~~~~~~~~p~a~iVN~Y~~-G--d~lg~H~D~~E~~~~~PIvSiSLG~~~iF~~~~~~------- 192 (235)
-+.|.+++..++... ++ .+-+|.|-. + .+++.|.|..+. ++.==.|..+.-++.+..
T Consensus 146 ~p~l~~l~~~Le~~f-----g~---~v~~N~Y~tp~Gs~g~~pH~D~~Dv-----FllQv~G~KrWrL~~P~~~~~~lp~ 212 (489)
T 4diq_A 146 STTVWQFLAVLQEQF-----GS---MAGSNVYLTPPNSQGFAPHYDDIEA-----FVLQLEGRKLWRVYRPRAPTEELAL 212 (489)
T ss_dssp CHHHHHHHHHHHHHH-----TS---CEEEEEEEECSSBCCSCCBCCSSEE-----EEEEEEECEEEEEECCSSGGGTTCS
T ss_pred ChHHHHHHHHHHHHh-----CC---cccceEEecCCCcccccCccCCcce-----EEEEEeeEEEEEEeCCCCccccCCC
Confidence 334666777766544 11 355688864 3 356799998642 222222333333322211
Q ss_pred ----------CCCCCEEEEcCCCcEEEEcccccceeeccCCCCCcc
Q 026678 193 ----------REDPPLAMFLRSGDAVLMAGEARECFHGECVLPGNF 228 (235)
Q Consensus 193 ----------~~~~~~~l~L~sGDvlvM~G~sR~~~H~VP~~~~~~ 228 (235)
..+....+.|++||+|.|= |.|||.+--..+.+
T Consensus 213 ~~~~~~~~~~~~~p~~e~~L~pGDvLYiP---~g~~H~~~s~~~~~ 255 (489)
T 4diq_A 213 TSSPNFSQDDLGEPVLQTVLEPGDLLYFP---RGFIHQAECQDGVH 255 (489)
T ss_dssp SCCCCCCGGGCCCCSEEEEECTTCEEEEC---TTCEEEEEBCSSCC
T ss_pred cccccCCcccccCcceEEEECCCCEEEEC---CCCceEEEecCCCc
Confidence 1134568999999999985 44777776554433
No 18
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=33.27 E-value=87 Score=27.22 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=22.4
Q ss_pred CEEEEcCCCcEEEEcccccceeeccC-CC--CCcceeee
Q 026678 197 PLAMFLRSGDAVLMAGEARECFHGEC-VL--PGNFIIMI 232 (235)
Q Consensus 197 ~~~l~L~sGDvlvM~G~sR~~~H~VP-~~--~~~~~~~~ 232 (235)
.+.+.++.||++++.+. .+||-. -. .+..|.++
T Consensus 221 ~v~~~~~aGd~v~f~~~---~~H~s~~N~~ts~~~R~a~ 256 (319)
T 3gja_A 221 AYPMVLKPGEAVIFWSN---TMHASLPHTGSKTDYRMGF 256 (319)
T ss_dssp CCBCCBCTTEEEEEETT---SCEEECCCCSCTTCCEEEE
T ss_pred eeEeeECCCeEEEEcCC---ccccCCCCCCCCCCcEEEE
Confidence 45678999999999985 455543 34 45555554
No 19
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=31.85 E-value=66 Score=23.84 Aligned_cols=59 Identities=10% Similarity=0.157 Sum_probs=37.3
Q ss_pred ceEEeeecCCCCCcCcccCCCCcCCCCCeEEEccCCceEEEeeCCCCCCCCEEEEcCCCcEEEEcccccceeec
Q 026678 147 EAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHG 220 (235)
Q Consensus 147 ~a~iVN~Y~~Gd~lg~H~D~~E~~~~~PIvSiSLG~~~iF~~~~~~~~~~~~~l~L~sGDvlvM~G~sR~~~H~ 220 (235)
...++. ..+|..+.+|.+.+|. ++-++ ....+.+++ ..+.|+.||++.+-..+++.|..
T Consensus 41 ~~~~~~-~~pG~~~~~H~~~~E~-----~~Vl~--G~~~~~~~g-------~~~~l~~GD~v~ip~g~~H~~~~ 99 (119)
T 3lwc_A 41 TIGYGR-YAPGQSLTETMAVDDV-----MIVLE--GRLSVSTDG-------ETVTAGPGEIVYMPKGETVTIRS 99 (119)
T ss_dssp EEEEEE-ECTTCEEEEECSSEEE-----EEEEE--EEEEEEETT-------EEEEECTTCEEEECTTCEEEEEE
T ss_pred EEEEEE-ECCCCCcCccCCCCEE-----EEEEe--CEEEEEECC-------EEEEECCCCEEEECCCCEEEEEc
Confidence 334443 4578889999843332 33333 334445532 25789999999999888766654
No 20
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=28.53 E-value=2.3e+02 Score=24.90 Aligned_cols=26 Identities=15% Similarity=0.181 Sum_probs=20.2
Q ss_pred CCEEEEcCCCcEEEEcccccceeeccCCC
Q 026678 196 PPLAMFLRSGDAVLMAGEARECFHGECVL 224 (235)
Q Consensus 196 ~~~~l~L~sGDvlvM~G~sR~~~H~VP~~ 224 (235)
....+.|++||+|.|= +.|||.|--+
T Consensus 216 ~~~~~~L~pGD~LyiP---~gwwH~v~s~ 241 (342)
T 1vrb_A 216 DAEIVNLTPGTMLYLP---RGLWHSTKSD 241 (342)
T ss_dssp SSEEEEECTTCEEEEC---TTCEEEEECS
T ss_pred CceEEEECCCcEEEeC---CCccEEEEEC
Confidence 4578999999999984 5677777655
No 21
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=25.48 E-value=63 Score=27.46 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=24.7
Q ss_pred CCEEEEcCCCcEEEEcccccceeeccC-CCCCcceeee
Q 026678 196 PPLAMFLRSGDAVLMAGEARECFHGEC-VLPGNFIIMI 232 (235)
Q Consensus 196 ~~~~l~L~sGDvlvM~G~sR~~~H~VP-~~~~~~~~~~ 232 (235)
..+.+.++.||+++|.+. .+|+.. -..+..|.++
T Consensus 214 ~~v~~~~~aGd~vlf~~~---~~H~s~~N~s~~~R~~~ 248 (308)
T 2a1x_A 214 ARVHLVMEKGDTVFFHPL---LIHGSGQNKTQGFRKAI 248 (308)
T ss_dssp CCEEECBCTTCEEEECTT---CCEEECCBCSSSCEEEE
T ss_pred CeEEccCCCccEEEECCC---ccccCCCCCCCCceEEE
Confidence 467899999999999993 677764 3444556554
No 22
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=23.77 E-value=1.9e+02 Score=28.42 Aligned_cols=85 Identities=19% Similarity=0.196 Sum_probs=49.5
Q ss_pred CCceEEeeecCCCCCcCcccCCCCcCCCCCeEEEcc--CC----------ceEEEeeCCC----CCCCCEEEEcCCCcEE
Q 026678 145 QPEAAIVNYFGLGDTLGGHLDDMEADWSKPIVSMSL--GC----------KAIFLLGGKS----REDPPLAMFLRSGDAV 208 (235)
Q Consensus 145 ~p~a~iVN~Y~~Gd~lg~H~D~~E~~~~~PIvSiSL--G~----------~~iF~~~~~~----~~~~~~~l~L~sGDvl 208 (235)
.++ +-++.|.+|+.+..|.|..+ ++ .+|+=| -. -+.-++.... ..+....|.=..|.++
T Consensus 123 ~~D-~~~a~Y~~G~fL~~H~D~~~---~R-rvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV 197 (633)
T 3kt7_A 123 KTD-MSINTYTKGCHLLTHDDVIG---SR-RISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIA 197 (633)
T ss_dssp CCC-EEEEEECTTCEEEEECCCCT---TE-EEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEE
T ss_pred cee-EEEEEeCCCCeeeecCCCCC---Ce-EEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEE
Confidence 455 66789999999999999632 11 222222 11 1122222111 0133556777889999
Q ss_pred EEcccccceeeccC-CCCC--cceeeeee
Q 026678 209 LMAGEARECFHGEC-VLPG--NFIIMIWC 234 (235)
Q Consensus 209 vM~G~sR~~~H~VP-~~~~--~~~~~~~~ 234 (235)
+|.-.-...||+|. ++++ -+.|.-|.
T Consensus 198 ~F~vsp~~S~H~V~eV~~~~~RlSItGWF 226 (633)
T 3kt7_A 198 FFKVLPGFSFHDXEEVKVDKHRLSIQGWY 226 (633)
T ss_dssp EEECCTTTCCEEECCBCSSCCEEEEEEEE
T ss_pred EEEcCCCCCcCCCCccCCCCCEEEEEEEe
Confidence 99876456689997 4333 45566563
No 23
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=22.62 E-value=1.7e+02 Score=20.98 Aligned_cols=59 Identities=15% Similarity=0.125 Sum_probs=39.5
Q ss_pred EeeecCCCCCcCcccCCCCcCCCCCeEEEccCCceEEEeeCCCCCCCCEEEEcCCCcEEEEcccccceeecc
Q 026678 150 IVNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGE 221 (235)
Q Consensus 150 iVN~Y~~Gd~lg~H~D~~E~~~~~PIvSiSLG~~~iF~~~~~~~~~~~~~l~L~sGDvlvM~G~sR~~~H~V 221 (235)
+.-.+.+|..+.+|.-..+ -+.+=+-....|.++++ ...|+.||++++.....+.+...
T Consensus 39 ~~~~l~~G~~~~~H~H~~~------e~~~Vl~G~~~~~i~~~-------~~~l~~Gd~i~ip~~~~H~~~~~ 97 (114)
T 3fjs_A 39 MRMVLPAGKQVGSHSVAGP------STIQCLEGEVEIGVDGA-------QRRLHQGDLLYLGAGAAHDVNAI 97 (114)
T ss_dssp EEEEECTTCEEEEECCSSC------EEEEEEESCEEEEETTE-------EEEECTTEEEEECTTCCEEEEES
T ss_pred EEEEECCCCccCceeCCCc------EEEEEEECEEEEEECCE-------EEEECCCCEEEECCCCcEEEEeC
Confidence 3344578888999975432 22333335566666542 57899999999998887666654
No 24
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=21.43 E-value=54 Score=28.52 Aligned_cols=30 Identities=27% Similarity=0.350 Sum_probs=23.9
Q ss_pred EcCCCcEEEEcccccceeeccCCCCCccee
Q 026678 201 FLRSGDAVLMAGEARECFHGECVLPGNFII 230 (235)
Q Consensus 201 ~L~sGDvlvM~G~sR~~~H~VP~~~~~~~~ 230 (235)
.|++||-|++...+++.+--||+.|...--
T Consensus 213 ~lr~GDsllvD~rag~A~E~ip~~~~~~~~ 242 (251)
T 3m9b_A 213 KLRPGDSLLVDTKAGYAFERIPLVPRGSAA 242 (251)
T ss_dssp CCCTTCEEEECTTTCBEEEECCCCC-----
T ss_pred CCCCCCEEEEeCCCceEEEEccCCCCcchh
Confidence 589999999999999999999999876543
No 25
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=21.32 E-value=2.2e+02 Score=20.09 Aligned_cols=59 Identities=14% Similarity=0.167 Sum_probs=35.3
Q ss_pred eeecCCCCCcCcccCCCCcCCCCCeEEEccCCceEEEe-eCCCCCCCCEEEEcCCCcEEEEcccccceeecc
Q 026678 151 VNYFGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLL-GGKSREDPPLAMFLRSGDAVLMAGEARECFHGE 221 (235)
Q Consensus 151 VN~Y~~Gd~lg~H~D~~E~~~~~PIvSiSLG~~~iF~~-~~~~~~~~~~~l~L~sGDvlvM~G~sR~~~H~V 221 (235)
.-...+|..+.+|.-..+. .-+.-+ -....|.+ ++ ....|+.||++++.....+.+...
T Consensus 43 ~~~~~pg~~~~~H~H~~~~---e~~~Vl--~G~~~~~~~~~-------~~~~l~~Gd~~~i~~~~~H~~~n~ 102 (125)
T 3h8u_A 43 VWHAHPGQEIASHVHPHGQ---DTWTVI--SGEAEYHQGNG-------IVTHLKAGDIAIAKPGQVHGAMNS 102 (125)
T ss_dssp EEEECTTCEECCC-CTTCE---EEEEEE--ECEEEEECSTT-------CEEEEETTEEEEECTTCCCEEEEC
T ss_pred EEEECCCCcCCcccCCCCe---EEEEEE--EeEEEEEECCC-------eEEEeCCCCEEEECCCCEEEeEeC
Confidence 3445778888999765321 112222 24555655 32 267899999999987776655543
No 26
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=21.24 E-value=72 Score=23.64 Aligned_cols=37 Identities=22% Similarity=0.346 Sum_probs=23.1
Q ss_pred ceEEEeeCCCCCCC-----CEEEEcCCCcEEEEcccc-cceeec
Q 026678 183 KAIFLLGGKSREDP-----PLAMFLRSGDAVLMAGEA-RECFHG 220 (235)
Q Consensus 183 ~~iF~~~~~~~~~~-----~~~l~L~sGDvlvM~G~s-R~~~H~ 220 (235)
++.|.++++ +... +..=.|.+||++|+.-.. =+.|+|
T Consensus 13 ~rL~~v~G~-~~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G 55 (114)
T 1svq_A 13 PRLLHISGD-KNAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNG 55 (114)
T ss_dssp EEEEEEECT-TSCEEEEECCCSSSCCTTSEEEEEETTEEEECCC
T ss_pred cEEEEEECC-CcEEEEEecCCHHHcCCCCeEEEecCCEEEEEeC
Confidence 578888875 2221 222358999999998554 334455
No 27
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=20.47 E-value=2.2e+02 Score=19.77 Aligned_cols=55 Identities=13% Similarity=0.190 Sum_probs=36.1
Q ss_pred cCCCCCcCcccCCCCcCCCCCeEEEccCCceEEEeeCCCCCCCCEEEEcCCCcEEEEcccccceeecc
Q 026678 154 FGLGDTLGGHLDDMEADWSKPIVSMSLGCKAIFLLGGKSREDPPLAMFLRSGDAVLMAGEARECFHGE 221 (235)
Q Consensus 154 Y~~Gd~lg~H~D~~E~~~~~PIvSiSLG~~~iF~~~~~~~~~~~~~l~L~sGDvlvM~G~sR~~~H~V 221 (235)
+.+|..+..|.-..+ -+.+-+-....|.+++ ....|..||++++.....+.+++.
T Consensus 45 ~~~g~~~~~H~h~~~------e~~~vl~G~~~~~i~~-------~~~~l~~Gd~i~i~~~~~H~~~~~ 99 (114)
T 2ozj_A 45 FADGESVSEEEYFGD------TLYLILQGEAVITFDD-------QKIDLVPEDVLMVPAHKIHAIAGK 99 (114)
T ss_dssp EETTSSCCCBCCSSC------EEEEEEEEEEEEEETT-------EEEEECTTCEEEECTTCCBEEEEE
T ss_pred ECCCCccccEECCCC------eEEEEEeCEEEEEECC-------EEEEecCCCEEEECCCCcEEEEeC
Confidence 457777888864322 1223344455566543 267899999999999987777664
Done!