Your job contains 1 sequence.
>026679
MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV
AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT
NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA
CWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNSTDESTDPQATVKSDQV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026679
(235 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2222612 - symbol:AT5G14530 "AT5G14530" species... 999 1.0e-100 1
DICTYBASE|DDB_G0278945 - symbol:DDB_G0278945 "WD repeat-c... 577 5.3e-56 1
TAIR|locus:2154996 - symbol:AT5G66240 "AT5G66240" species... 565 9.9e-55 1
FB|FBgn0032030 - symbol:Wdr82 species:7227 "Drosophila me... 516 1.5e-49 1
UNIPROTKB|Q5ZMV7 - symbol:WDR82 "WD repeat-containing pro... 505 2.3e-48 1
UNIPROTKB|E2RGF2 - symbol:WDR82 "Uncharacterized protein"... 505 2.3e-48 1
UNIPROTKB|Q6UXN9 - symbol:WDR82 "WD repeat-containing pro... 505 2.3e-48 1
UNIPROTKB|F2Z5U3 - symbol:WDR82 "Uncharacterized protein"... 505 2.3e-48 1
MGI|MGI:1924555 - symbol:Wdr82 "WD repeat domain containi... 505 2.3e-48 1
ZFIN|ZDB-GENE-030131-333 - symbol:wdr82 "WD repeat domain... 486 2.3e-46 1
UNIPROTKB|F1MG94 - symbol:WDR82 "Uncharacterized protein"... 479 1.3e-45 1
UNIPROTKB|E1BRZ6 - symbol:TWF2 "Twinfilin-2" species:9031... 470 1.2e-44 1
WB|WBGene00016374 - symbol:swd-2.2 species:6239 "Caenorha... 341 5.4e-31 1
POMBASE|SPBC18H10.06c - symbol:swd2 "Set1C complex subuni... 287 1.7e-27 2
SGD|S000001501 - symbol:SWD2 "Subunit of the COMPASS (Set... 274 6.8e-24 1
FB|FBgn0031431 - symbol:CG3515 species:7227 "Drosophila m... 272 1.1e-23 1
CGD|CAL0004300 - symbol:SWD2 species:5476 "Candida albica... 269 2.3e-23 1
UNIPROTKB|G4N7I7 - symbol:MGG_06406 "Uncharacterized prot... 263 1.0e-22 1
UNIPROTKB|C9JBU3 - symbol:WDR82 "WD repeat-containing pro... 238 4.4e-20 1
ASPGD|ASPL0000060719 - symbol:AN0065 species:162425 "Emer... 235 1.2e-19 1
POMBASE|SPAC824.04 - symbol:SPAC824.04 "WD repeat protein... 226 8.5e-19 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 206 1.8e-16 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 206 1.8e-16 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 207 2.1e-16 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 202 3.0e-16 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 202 5.2e-16 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 202 5.2e-16 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 202 5.2e-16 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 202 5.2e-16 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 202 5.2e-16 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 202 8.9e-16 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 202 8.9e-16 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 192 1.1e-14 1
ZFIN|ZDB-GENE-040808-14 - symbol:thoc3 "THO complex 3" sp... 189 1.3e-14 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 188 2.1e-14 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 187 2.5e-14 1
UNIPROTKB|Q29RH4 - symbol:THOC3 "THO complex subunit 3" s... 180 2.0e-13 1
UNIPROTKB|E2RC43 - symbol:THOC3 "Uncharacterized protein"... 180 2.0e-13 1
UNIPROTKB|Q96J01 - symbol:THOC3 "THO complex subunit 3" s... 180 2.0e-13 1
UNIPROTKB|F1S386 - symbol:THOC3 "Uncharacterized protein"... 180 2.0e-13 1
MGI|MGI:1920916 - symbol:Thoc3 "THO complex 3" species:10... 180 2.0e-13 1
RGD|1311669 - symbol:Thoc3 "THO complex 3" species:10116 ... 180 2.0e-13 1
UNIPROTKB|F1NUQ0 - symbol:THOC3 "Uncharacterized protein"... 179 3.3e-13 1
FB|FBgn0037569 - symbol:tex "tex" species:7227 "Drosophil... 173 8.7e-13 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 177 1.1e-12 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 177 1.1e-12 1
UNIPROTKB|C9J355 - symbol:WDR82 "WD repeat-containing pro... 159 1.0e-11 1
UNIPROTKB|B3KPU1 - symbol:GNB2 "Guanine nucleotide-bindin... 164 1.9e-11 1
TAIR|locus:2157762 - symbol:AT5G50230 "AT5G50230" species... 169 3.8e-11 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 166 4.7e-11 1
UNIPROTKB|E7EP32 - symbol:GNB2 "Guanine nucleotide-bindin... 164 8.1e-11 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 166 9.7e-11 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 166 1.1e-10 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 166 1.3e-10 1
UNIPROTKB|P11017 - symbol:GNB2 "Guanine nucleotide-bindin... 164 1.3e-10 1
UNIPROTKB|E2RD95 - symbol:GNB2 "Uncharacterized protein" ... 164 1.3e-10 1
UNIPROTKB|P62879 - symbol:GNB2 "Guanine nucleotide-bindin... 164 1.3e-10 1
MGI|MGI:95784 - symbol:Gnb2 "guanine nucleotide binding p... 164 1.3e-10 1
RGD|1359321 - symbol:Gnb4 "guanine nucleotide binding pro... 164 1.3e-10 1
RGD|69319 - symbol:Gnb2 "guanine nucleotide binding prote... 164 1.3e-10 1
UNIPROTKB|Q9HAV0 - symbol:GNB4 "Guanine nucleotide-bindin... 163 2.0e-10 1
MGI|MGI:104581 - symbol:Gnb4 "guanine nucleotide binding ... 163 2.0e-10 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 163 4.2e-10 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 161 5.8e-10 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 162 5.8e-10 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 165 9.1e-10 1
UNIPROTKB|B3KVK2 - symbol:GNB1 "cDNA FLJ16663 fis, clone ... 153 1.2e-09 1
UNIPROTKB|E1BYR9 - symbol:ATG16L1 "Uncharacterized protei... 159 2.3e-09 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 156 2.9e-09 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 155 3.9e-09 1
UNIPROTKB|Q8N0X2 - symbol:SPAG16 "Sperm-associated antige... 157 4.7e-09 1
UNIPROTKB|P62871 - symbol:GNB1 "Guanine nucleotide-bindin... 153 4.8e-09 1
UNIPROTKB|P62872 - symbol:GNB1 "Guanine nucleotide-bindin... 153 4.8e-09 1
UNIPROTKB|P62873 - symbol:GNB1 "Guanine nucleotide-bindin... 153 4.8e-09 1
MGI|MGI:95781 - symbol:Gnb1 "guanine nucleotide binding p... 153 4.8e-09 1
RGD|2718 - symbol:Gnb1 "guanine nucleotide binding protei... 153 4.8e-09 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 155 6.2e-09 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 154 7.4e-09 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 151 7.9e-09 1
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 153 1.0e-08 1
ZFIN|ZDB-GENE-040426-1851 - symbol:wdr61 "WD repeat domai... 148 1.6e-08 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 150 1.8e-08 1
ZFIN|ZDB-GENE-050417-401 - symbol:atg16l1 "ATG16 autophag... 152 1.9e-08 1
TAIR|locus:2139489 - symbol:AGB1 "AT4G34460" species:3702... 149 2.1e-08 1
ZFIN|ZDB-GENE-030131-823 - symbol:gnb1a "guanine nucleoti... 148 2.2e-08 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 148 2.6e-08 1
WB|WBGene00001679 - symbol:gpb-1 species:6239 "Caenorhabd... 147 2.9e-08 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 146 3.4e-08 1
ZFIN|ZDB-GENE-040426-2855 - symbol:gnb1b "guanine nucleot... 145 5.2e-08 1
FB|FBgn0046222 - symbol:CG1109 species:7227 "Drosophila m... 150 5.3e-08 1
MGI|MGI:1918511 - symbol:Poc1b "POC1 centriolar protein h... 147 5.7e-08 1
UNIPROTKB|H0YN81 - symbol:WDR61 "WD repeat-containing pro... 143 6.4e-08 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 146 6.6e-08 1
FB|FBgn0001105 - symbol:Gbeta13F "G protein beta-subunit ... 144 6.8e-08 1
UNIPROTKB|Q9GZS3 - symbol:WDR61 "WD repeat-containing pro... 143 7.1e-08 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 145 7.9e-08 1
SGD|S000000680 - symbol:TUP1 "General repressor of transc... 147 1.1e-07 1
UNIPROTKB|Q32LN7 - symbol:WDR61 "WD repeat-containing pro... 141 1.2e-07 1
UNIPROTKB|E2RBV0 - symbol:WDR61 "Uncharacterized protein"... 141 1.2e-07 1
UNIPROTKB|Q6PBD6 - symbol:wdr61 "WD repeat-containing pro... 141 1.2e-07 1
WARNING: Descriptions of 316 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2222612 [details] [associations]
symbol:AT5G14530 "AT5G14530" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 EMBL:AL163792 KO:K14962 HOGENOM:HOG000176477
OMA:LRYLSMY ProtClustDB:CLSN2687231 EMBL:AY086271 EMBL:BT025881
IPI:IPI00521261 PIR:T48626 RefSeq:NP_196957.1 UniGene:At.28230
ProteinModelPortal:Q9LYK6 SMR:Q9LYK6 STRING:Q9LYK6 PaxDb:Q9LYK6
PRIDE:Q9LYK6 EnsemblPlants:AT5G14530.1 GeneID:831304
KEGG:ath:AT5G14530 TAIR:At5g14530 InParanoid:Q9LYK6
PhylomeDB:Q9LYK6 Genevestigator:Q9LYK6 Uniprot:Q9LYK6
Length = 330
Score = 999 (356.7 bits), Expect = 1.0e-100, P = 1.0e-100
Identities = 187/229 (81%), Positives = 202/229 (88%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
MYDNRILRYFKGHK+RV+SLCMSP+NDSFMSGSLD SVR+WDLRVNACQGIL LRGRP V
Sbjct: 101 MYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAV 160
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
A+DQQGLVFA+AME GA+KLFDSR YDKGPFDTFLVGGDTAEV DIKFSNDGKSMLLTTT
Sbjct: 161 AYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTT 220
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
NNNIYVLDAY GEK+CGFSLEPS T EATFTPDG+YV+SGSGDGTLHAWNI +EVA
Sbjct: 221 NNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVA 280
Query: 181 CWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNST--DESTDPQ 227
W NIGVV+CLKWAPRRAMFVAAS+VL+FWIPN + D TD Q
Sbjct: 281 RWENNIGVVSCLKWAPRRAMFVAASTVLTFWIPNDGESPAPADPPTDQQ 329
>DICTYBASE|DDB_G0278945 [details] [associations]
symbol:DDB_G0278945 "WD repeat-containing protein 82"
species:44689 "Dictyostelium discoideum" [GO:0030587 "sorocarp
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278945 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030587 EMBL:AAFI02000024 KO:K14962 OMA:CTNMAFW
RefSeq:XP_641992.1 ProteinModelPortal:Q54XN8 STRING:Q54XN8
EnsemblProtists:DDB0218126 GeneID:8621724 KEGG:ddi:DDB_G0278945
InParanoid:Q54XN8 ProtClustDB:CLSZ2729103 Uniprot:Q54XN8
Length = 319
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 105/218 (48%), Positives = 150/218 (68%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ L+YFKGH+ +V+S+ MSP+ND F+SGSLD ++R+WDLR N CQG+LR GRP V
Sbjct: 100 LHDNKYLKYFKGHRNKVVSISMSPINDMFLSGSLDDTIRMWDLRTNVCQGLLRRNGRPAV 159
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT-AEVCDIKFSNDGKSMLLTT 119
+FD QG++FA A+ IKL+D R+YDKGPF +F + E +KF+ DGK +LL+T
Sbjct: 160 SFDPQGIIFATAVSVNTIKLYDLRNYDKGPFSSFSIDHPIPVEWTSMKFTADGKYILLST 219
Query: 120 TNNNIYVLDAYGGEKRCGFSLEPSPNTNT-EATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
N I+++D++ GE + ++ + N + E++F+PD QYV+SGS DGT+H W T E
Sbjct: 220 KTNIIFLIDSFTGEVKQRYTSFKNDNGSVIESSFSPDAQYVLSGSEDGTVHIWKTLTGEE 279
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPS 216
VA W G+ V ++W PR M A S L+FWIPN S
Sbjct: 280 VAVWGGHSSTVGRVQWNPRSMMAATACSNLAFWIPNDS 317
>TAIR|locus:2154996 [details] [associations]
symbol:AT5G66240 "AT5G66240" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K14962 HOGENOM:HOG000176477 OMA:CTNMAFW EMBL:AY081317
EMBL:BT002585 IPI:IPI00543245 RefSeq:NP_569031.1 UniGene:At.43477
ProteinModelPortal:Q8RXD8 SMR:Q8RXD8 IntAct:Q8RXD8 STRING:Q8RXD8
EnsemblPlants:AT5G66240.2 GeneID:836756 KEGG:ath:AT5G66240
TAIR:At5g66240 InParanoid:Q8RXD8 PhylomeDB:Q8RXD8
ProtClustDB:CLSN2687231 ArrayExpress:Q8RXD8 Genevestigator:Q8RXD8
Uniprot:Q8RXD8
Length = 331
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 107/217 (49%), Positives = 149/217 (68%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ LRYFKGH +RV+SL + + F+SGSLD +V +WD RV CQG+LR++GRP
Sbjct: 107 LHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAA 166
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
A+D QGL+FA+A G I++FD+R Y+KGPF+ F VGGD +E +KFSNDG+ MLLTT
Sbjct: 167 AYDDQGLIFAIAF-GGYIRMFDARMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTM 225
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNT-EATFTPDGQYVVSGSGDGTLHAWNINTRNEV 179
+ I+VLD++ G FS++P +T +A F+P+G +VVSGSGDG+ HAW + + +V
Sbjct: 226 DGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQV 285
Query: 180 ACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPS 216
W G +KW P MFV SS L+F IP+ S
Sbjct: 286 HSWMGLGSEPPVIKWGPGSPMFVTGSSELAFVIPDLS 322
>FB|FBgn0032030 [details] [associations]
symbol:Wdr82 species:7227 "Drosophila melanogaster"
[GO:0008352 "katanin complex" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0048188 "Set1C/COMPASS
complex" evidence=IDA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0080182 "histone H3-K4 trimethylation"
evidence=IMP] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048188 GO:GO:0080182
HSSP:P16649 KO:K14962 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
EMBL:AY069081 RefSeq:NP_609217.1 UniGene:Dm.6967 SMR:Q9VLN1
IntAct:Q9VLN1 MINT:MINT-1570298 STRING:Q9VLN1
EnsemblMetazoa:FBtr0079650 GeneID:34153 KEGG:dme:Dmel_CG17293
UCSC:CG17293-RA FlyBase:FBgn0032030 InParanoid:Q9VLN1
OrthoDB:EOG4C5B12 GenomeRNAi:34153 NextBio:787125 Uniprot:Q9VLN1
Length = 317
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 98/218 (44%), Positives = 151/218 (69%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ LRYF GH ++VISLC+SPV D+F+SGSLD ++R+WDLR CQG++ L GRP
Sbjct: 96 LHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPIA 155
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCD---IKFSNDGKSMLL 117
A+D +GL+FA + + +IKL+D RS+DKGPF TF + + + CD +KFS DGK++L+
Sbjct: 156 AYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQE--KECDWTGLKFSRDGKTILI 213
Query: 118 TTTNNNIYVLDAYGGEKRCGFSLEPS-PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176
+T + I ++DA+ G F+ P+ EA+F+PD Q++ SGS DG +H WN +T
Sbjct: 214 STNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPDSQFIFSGSTDGRVHIWNADTG 273
Query: 177 NEVACWNGNI-GVVACLKWAPRRAMFVAASSVLSFWIP 213
N+V+ NG+ G V C+++ P+ M +A + ++FW+P
Sbjct: 274 NKVSVLNGDHPGPVQCVQFNPKYMMLASACTNMAFWLP 311
>UNIPROTKB|Q5ZMV7 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 EMBL:AJ719277
IPI:IPI00598962 RefSeq:NP_001006135.1 UniGene:Gga.17656
ProteinModelPortal:Q5ZMV7 STRING:Q5ZMV7 PRIDE:Q5ZMV7
Ensembl:ENSGALT00000036280 GeneID:415942 KEGG:gga:415942 CTD:80335
HOVERGEN:HBG089149 NextBio:20819468 ArrayExpress:Q5ZMV7
Uniprot:Q5ZMV7
Length = 313
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 95/216 (43%), Positives = 145/216 (67%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHTKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 119
+FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
Query: 120 TNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
I ++DA+ G F S EA+FTPD Q+++ GS DG +H WN + +
Sbjct: 214 NGGFIRLIDAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGMK 273
Query: 179 VACWNG-NIGVVACLKWAPRRAMFVAASSVLSFWIP 213
VA +G + G + CL++ P+ F +A S ++FW+P
Sbjct: 274 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLP 309
>UNIPROTKB|E2RGF2 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000785 "chromatin" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188 KO:K14962
GO:GO:0072357 GeneTree:ENSGT00530000063965 CTD:80335 OMA:CTNMAFW
EMBL:AAEX03012197 RefSeq:XP_859624.1 ProteinModelPortal:E2RGF2
SMR:E2RGF2 Ensembl:ENSCAFT00000015643 GeneID:484740 KEGG:cfa:484740
NextBio:20858819 Uniprot:E2RGF2
Length = 313
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 95/216 (43%), Positives = 146/216 (67%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 119
+FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
Query: 120 TNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ I ++DA+ G F S EA+FTPD Q+++ GS DG +H WN + +
Sbjct: 214 NGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK 273
Query: 179 VACWNG-NIGVVACLKWAPRRAMFVAASSVLSFWIP 213
VA +G + G + CL++ P+ F +A S ++FW+P
Sbjct: 274 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLP 309
>UNIPROTKB|Q6UXN9 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0072357 "PTW/PP1 phosphatase complex"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IDA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471055 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000785 GO:GO:0048188 GO:GO:0051568 KO:K14962
GO:GO:0072357 HOGENOM:HOG000176477 OrthoDB:EOG4TTGJJ CTD:80335
HOVERGEN:HBG089149 EMBL:AY358264 EMBL:AK074290 EMBL:AK291380
IPI:IPI00152695 RefSeq:NP_079498.2 UniGene:Hs.194110
ProteinModelPortal:Q6UXN9 SMR:Q6UXN9 IntAct:Q6UXN9 STRING:Q6UXN9
PhosphoSite:Q6UXN9 DMDM:74758580 PaxDb:Q6UXN9 PeptideAtlas:Q6UXN9
PRIDE:Q6UXN9 Ensembl:ENST00000296490 GeneID:80335 KEGG:hsa:80335
UCSC:uc003ddk.2 GeneCards:GC03M052265 HGNC:HGNC:28826 MIM:611059
neXtProt:NX_Q6UXN9 PharmGKB:PA142670585 InParanoid:Q6UXN9
OMA:CTNMAFW ChiTaRS:WDR82 GenomeRNAi:80335 NextBio:70900
ArrayExpress:Q6UXN9 Bgee:Q6UXN9 CleanEx:HS_WDR82
Genevestigator:Q6UXN9 Uniprot:Q6UXN9
Length = 313
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 95/216 (43%), Positives = 146/216 (67%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 119
+FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
Query: 120 TNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ I ++DA+ G F S EA+FTPD Q+++ GS DG +H WN + +
Sbjct: 214 NGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK 273
Query: 179 VACWNG-NIGVVACLKWAPRRAMFVAASSVLSFWIP 213
VA +G + G + CL++ P+ F +A S ++FW+P
Sbjct: 274 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLP 309
>UNIPROTKB|F2Z5U3 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0048188 "Set1C/COMPASS complex" evidence=IEA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785
GO:GO:0042800 GO:GO:0048188 KO:K14962 GO:GO:0072357
GeneTree:ENSGT00530000063965 OMA:CTNMAFW EMBL:CU915558
RefSeq:XP_003132297.1 UniGene:Ssc.1045 UniGene:Ssc.53788
ProteinModelPortal:F2Z5U3 SMR:F2Z5U3 Ensembl:ENSSSCT00000012513
GeneID:100522703 KEGG:ssc:100522703 CTD:728505 Uniprot:F2Z5U3
Length = 313
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 95/216 (43%), Positives = 146/216 (67%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 119
+FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
Query: 120 TNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ I ++DA+ G F S EA+FTPD Q+++ GS DG +H WN + +
Sbjct: 214 NGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK 273
Query: 179 VACWNG-NIGVVACLKWAPRRAMFVAASSVLSFWIP 213
VA +G + G + CL++ P+ F +A S ++FW+P
Sbjct: 274 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLP 309
>MGI|MGI:1924555 [details] [associations]
symbol:Wdr82 "WD repeat domain containing 82" species:10090
"Mus musculus" [GO:0000785 "chromatin" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0035097 "histone methyltransferase complex"
evidence=ISO] [GO:0048188 "Set1C/COMPASS complex" evidence=ISO]
[GO:0051568 "histone H3-K4 methylation" evidence=ISO;IMP]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924555 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000785 GO:GO:0003682
GO:GO:0042800 GO:GO:0048188 GO:GO:0051568 KO:K14962 GO:GO:0072357
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OrthoDB:EOG4TTGJJ
CTD:80335 HOVERGEN:HBG089149 OMA:CTNMAFW ChiTaRS:WDR82
EMBL:AK035109 EMBL:AK037620 EMBL:AK149692 EMBL:EF011615
EMBL:BC019115 EMBL:BC031502 IPI:IPI00221414 RefSeq:NP_084172.1
UniGene:Mm.265125 ProteinModelPortal:Q8BFQ4 SMR:Q8BFQ4
IntAct:Q8BFQ4 STRING:Q8BFQ4 PhosphoSite:Q8BFQ4
REPRODUCTION-2DPAGE:Q8BFQ4 PaxDb:Q8BFQ4 PRIDE:Q8BFQ4
Ensembl:ENSMUST00000020490 GeneID:77305 KEGG:mmu:77305
InParanoid:Q8BFQ4 NextBio:346735 Bgee:Q8BFQ4 CleanEx:MM_WDR82
Genevestigator:Q8BFQ4 Uniprot:Q8BFQ4
Length = 313
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 95/216 (43%), Positives = 146/216 (67%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 119
+FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
Query: 120 TNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ I ++DA+ G F S EA+FTPD Q+++ GS DG +H WN + +
Sbjct: 214 NGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK 273
Query: 179 VACWNG-NIGVVACLKWAPRRAMFVAASSVLSFWIP 213
VA +G + G + CL++ P+ F +A S ++FW+P
Sbjct: 274 VAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLP 309
>ZFIN|ZDB-GENE-030131-333 [details] [associations]
symbol:wdr82 "WD repeat domain containing 82"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR002108 InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102
SMART:SM00320 ZFIN:ZDB-GENE-030131-333 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005622
OrthoDB:EOG4TTGJJ EMBL:AY423022 IPI:IPI00492504
ProteinModelPortal:Q6TEM7 SMR:Q6TEM7 PRIDE:Q6TEM7
HOGENOM:HOG000170291 InParanoid:Q6TEM7 ArrayExpress:Q6TEM7
Bgee:Q6TEM7 Uniprot:Q6TEM7
Length = 600
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 93/209 (44%), Positives = 139/209 (66%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHNKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 119
+FD +GL+FA + + +KL+D RS+DKGPF TF + + T E +KFSNDGK +L++T
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKLQYERTCEWTGLKFSNDGKLILVST 213
Query: 120 TNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ VLDA+ G F S EA+FTPD Q+++ GS DG +H WN + +
Sbjct: 214 NGGTLRVLDAFKGAVLHSFGGYNNSKGVILEASFTPDSQFIMIGSEDGKIHVWNAESGMK 273
Query: 179 VACWNG-NIGVVACLKWAPRRAMFVAASS 206
VA +G + G V CL++ P+ F +A S
Sbjct: 274 VALLDGKHTGPVTCLQFNPKFMTFASACS 302
>UNIPROTKB|F1MG94 [details] [associations]
symbol:WDR82 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
[GO:0048188 "Set1C/COMPASS complex" evidence=IEA] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:DAAA02054383
EMBL:DAAA02054384 IPI:IPI00688764 ProteinModelPortal:F1MG94
Ensembl:ENSBTAT00000045850 ArrayExpress:F1MG94 Uniprot:F1MG94
Length = 602
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 92/209 (44%), Positives = 140/209 (66%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTT 119
+FD +GL+FA + + +KL+D RS+DKGPF TF + D T E +KFSNDGK +L++T
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTCEWTGLKFSNDGKLILIST 213
Query: 120 TNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ I ++DA+ G F S EA+FTPD Q+++ GS DG +H WN + +
Sbjct: 214 NGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGIK 273
Query: 179 VACWNG-NIGVVACLKWAPRRAMFVAASS 206
VA +G + G + CL++ P+ F +A S
Sbjct: 274 VAVLDGKHTGPITCLQFNPKFMTFASACS 302
>UNIPROTKB|E1BRZ6 [details] [associations]
symbol:TWF2 "Twinfilin-2" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0000785 "chromatin"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0072357 "PTW/PP1 phosphatase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR002108
InterPro:IPR015943 Pfam:PF00241 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS51263 SMART:SM00102 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000785 GO:GO:0042800 GO:GO:0048188
GO:GO:0072357 GeneTree:ENSGT00530000063965 EMBL:AADN02056441
EMBL:AADN02056442 EMBL:AADN02056443 EMBL:AADN02056444
EMBL:AADN02056445 EMBL:AADN02056446 EMBL:AADN02056447
IPI:IPI00577651 ProteinModelPortal:E1BRZ6
Ensembl:ENSGALT00000006337 ArrayExpress:E1BRZ6 Uniprot:E1BRZ6
Length = 601
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 92/210 (43%), Positives = 139/210 (66%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++DN+ +RYF GH +RV++L MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P
Sbjct: 94 LHDNKYIRYFPGHTKRVVALSMSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVC 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGD-TAEVCDIKFSNDGKSMLLT 118
+FD +GL+FA + + +KL+D RS+DK GPF TF + D T E +KFSNDGK +L++
Sbjct: 154 SFDPEGLIFAAGVNSEMVKLYDLRSFDKKGPFATFKMQYDRTCEWTGLKFSNDGKLILIS 213
Query: 119 TTNNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN 177
T I ++DA+ G F S EA+FTPD Q+++ GS DG +H WN +
Sbjct: 214 TNGGFIRLIDAFKGAVLHTFGGYNNSKAVTLEASFTPDSQFIMIGSEDGKIHVWNGESGM 273
Query: 178 EVACWNG-NIGVVACLKWAPRRAMFVAASS 206
+VA +G + G + CL++ P+ F +A S
Sbjct: 274 KVAVLDGKHTGPITCLQFNPKFMTFASACS 303
>WB|WBGene00016374 [details] [associations]
symbol:swd-2.2 species:6239 "Caenorhabditis elegans"
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0043652 "engulfment of apoptotic
cell" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0040035 GO:GO:0043652 EMBL:FO080768 KO:K14962
HOGENOM:HOG000176477 GeneTree:ENSGT00530000063965 OMA:CTNMAFW
PIR:T34139 RefSeq:NP_501280.1 ProteinModelPortal:Q18403 SMR:Q18403
STRING:Q18403 PaxDb:Q18403 EnsemblMetazoa:C33H5.7 GeneID:177561
KEGG:cel:CELE_C33H5.7 UCSC:C33H5.7 CTD:177561 WormBase:C33H5.7
InParanoid:Q18403 NextBio:897372 Uniprot:Q18403
Length = 326
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 71/216 (32%), Positives = 126/216 (58%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAF 62
DN+ +RYF+GH + V + +SP++D F+S + D ++R+WDL+ + C G++ L P F
Sbjct: 101 DNKYIRYFQGHDKLVTGINVSPMDDMFLSVAEDKTIRLWDLKTHNCIGLMNLSATPIATF 160
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF--LVGGDTAEVCDIKFSNDGKSMLLTTT 120
D +GL+FA ++ IKL+D RS+DKGPF +F L D E ++FS GK +++ T
Sbjct: 161 DPEGLLFAAGLDNNIIKLYDLRSFDKGPFSSFGPLENEDNVEWTAMRFSPCGKYIMICTN 220
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNT---EATFTPDGQYVVSGSGDGTLHAWNINTRN 177
++ + ++DA+ G + F+LE N A+FTP+ +++ GS DG ++ +++ T
Sbjct: 221 SSQLLLVDAFTGLIK--FTLEEHQNAQKIPLMASFTPESSHIMVGSSDGYIYFYDVET-G 277
Query: 178 EVACWNGNIGVVAC--LKWAPRRAMFVAASSVLSFW 211
E+A C +++P+ + A + L+ W
Sbjct: 278 EIALKTLAPNNQTCHIAEFSPQHFVAATADTKLTLW 313
>POMBASE|SPBC18H10.06c [details] [associations]
symbol:swd2 "Set1C complex subunit Swd2.1"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IC] [GO:0016571 "histone
methylation" evidence=IMP] [GO:0048188 "Set1C/COMPASS complex"
evidence=IDA] [GO:0051568 "histone H3-K4 methylation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC18H10.06c GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0048188
GO:GO:0051568 KO:K14962 PIR:T39770 RefSeq:NP_595730.1
ProteinModelPortal:O60137 STRING:O60137
EnsemblFungi:SPBC18H10.06c.1 GeneID:2540788 KEGG:spo:SPBC18H10.06c
HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 NextBio:20801906
Uniprot:O60137
Length = 357
Score = 287 (106.1 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 60/136 (44%), Positives = 86/136 (63%)
Query: 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD 63
NR LRYF GHK+ V S+ +SP +++F+S SLD+++R+WDLR CQG+L + AFD
Sbjct: 102 NRYLRYFPGHKQTVTSIDVSPADETFLSASLDNTIRLWDLRSPNCQGLLNVSSPVVAAFD 161
Query: 64 QQGLVFAVAMEAG-AIKLFDSRSYDKGPFD----TFLVGGDTAEVCDIKFSNDGKSMLLT 118
GL+FA E I L++ +S+D PF TFL + +++FS DGK +LLT
Sbjct: 162 ATGLIFASVSERKYKISLYNIKSFDARPFQDIPLTFLP--PHVRIANVEFSTDGKYLLLT 219
Query: 119 TTNNNIYVLDAYGGEK 134
T N+ YV+DAY G +
Sbjct: 220 TGNDFHYVIDAYSGSE 235
Score = 36 (17.7 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 192 LKWAPRRAMFVAASSVLSFW 211
+++ PR + V A S + FW
Sbjct: 337 VRFNPRFSQLVTAHSGVIFW 356
>SGD|S000001501 [details] [associations]
symbol:SWD2 "Subunit of the COMPASS (Set1C) complex"
species:4932 "Saccharomyces cerevisiae" [GO:0048188 "Set1C/COMPASS
complex" evidence=IPI] [GO:0051568 "histone H3-K4 methylation"
evidence=IDA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0030847 "termination of RNA polymerase II
transcription, exosome-dependent" evidence=IPI] [GO:0030846
"termination of RNA polymerase II transcription, poly(A)-coupled"
evidence=IPI] [GO:0031126 "snoRNA 3'-end processing" evidence=IMP]
[GO:0031124 "mRNA 3'-end processing" evidence=IMP] [GO:0000723
"telomere maintenance" evidence=IMP] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IDA]
[GO:0034729 "histone H3-K79 methylation" evidence=IMP] [GO:0005847
"mRNA cleavage and polyadenylation specificity factor complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000001501 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:BK006944 EMBL:X74152
GO:GO:0048188 GO:GO:0051568 GO:GO:0000781 GO:GO:0000723 KO:K02138
RefSeq:NP_012909.3 GeneID:853853 KEGG:sce:YKL016C GO:GO:0005847
GO:GO:0031124 GO:GO:0031126 GO:GO:0030846 RefSeq:NP_012907.3
GeneID:853851 KEGG:sce:YKL018W KO:K14962 GO:GO:0030847
GO:GO:0034729 HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 EMBL:Z28018
EMBL:AY558094 PIR:S37831 ProteinModelPortal:P36104 SMR:P36104
DIP:DIP-6844N IntAct:P36104 MINT:MINT-2781635 STRING:P36104
PaxDb:P36104 PeptideAtlas:P36104 EnsemblFungi:YKL018W CYGD:YKL018w
GeneTree:ENSGT00530000063965 OMA:LRYLSMY NextBio:975082
Genevestigator:P36104 GermOnline:YKL018W Uniprot:P36104
Length = 329
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 74/224 (33%), Positives = 119/224 (53%)
Query: 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD 63
N+ LRYF GH V L M+PVND+F+S S D SVR+WDL+++ Q I+ +A+D
Sbjct: 103 NQYLRYFSGHGALVNDLKMNPVNDTFLSSSYDESVRLWDLKISKPQVIIPSLVPNCIAYD 162
Query: 64 QQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGGDT-AEVCDIKFSNDGKSMLLTTTN 121
GLVFA+ E I L++ + +GPF + T ++ ++FSN+GK +L+ ++
Sbjct: 163 PSGLVFALGNPENFEIGLYNLKKIQEGPFLIIKINDATFSQWNKLEFSNNGKYLLVGSSI 222
Query: 122 NNIYVLDAYGGEKR---CGFSLEPSPN--TNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176
+ DA+ G++ G P + A FTPDG++V+ DG + WN +
Sbjct: 223 GKHLIFDAFTGQQLFELIGTRAFPMREFLDSGSACFTPDGEFVLGTDYDGRIAIWNHSDS 282
Query: 177 --NEVACWNGNIGVVA---C---LKWAPRRAMFVAASSVLSFWI 212
N+V G I V+ C + + P+ +MFV A + F++
Sbjct: 283 ISNKVLRPQGFIPCVSHETCPRSIAFNPKYSMFVTADETVDFYV 326
>FB|FBgn0031431 [details] [associations]
symbol:CG3515 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AY089469
ProteinModelPortal:Q8T3W2 SMR:Q8T3W2 PRIDE:Q8T3W2
FlyBase:FBgn0031431 eggNOG:NOG238696 InParanoid:Q8T3W2
OrthoDB:EOG4W0VVH ArrayExpress:Q8T3W2 Bgee:Q8T3W2 Uniprot:Q8T3W2
Length = 395
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 68/212 (32%), Positives = 109/212 (51%)
Query: 7 LRYFKGHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNA-CQGILRLRGRPTVAFDQ 64
+R F GH + + L P ++ F+S D V +WD+RV I LR RP AFD
Sbjct: 101 VRVFGGHAKTINRLASQPGGENVFISAGRDDQVYMWDIRVKTHTHRIKNLR-RPLCAFDL 159
Query: 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDT-AEVCDIKFSNDGKSMLLTTTNNN 123
+GL A + I++ D R P F+ + A ++F+ +GKS+LL+T ++
Sbjct: 160 EGLFLATSSGTEGIQIRDVRMMGGEPSRKFVYQVNAKANWTQLQFAPNGKSLLLSTDHSW 219
Query: 124 IYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
+ + A G + F+ +AT+TPD Q+++SG+ G +H W VA
Sbjct: 220 CFSVSAIDGTYQQSFTGYSNKLRLPLDATYTPDSQFILSGADKGRIHIWRAADGFPVAVL 279
Query: 183 NGN-IGVVACLKWAPRRAMFVAASSVLSFWIP 213
GN +G V C+++ PR MFV++ S + FW+P
Sbjct: 280 KGNNMGPVRCMRFNPRATMFVSSDSRIVFWMP 311
>CGD|CAL0004300 [details] [associations]
symbol:SWD2 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005847 "mRNA cleavage
and polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030846 "termination of RNA
polymerase II transcription, poly(A)-coupled" evidence=IEA]
[GO:0031126 "snoRNA 3'-end processing" evidence=IEA] [GO:0051568
"histone H3-K4 methylation" evidence=IEA] [GO:0031124 "mRNA 3'-end
processing" evidence=IEA] [GO:0034729 "histone H3-K79 methylation"
evidence=IEA] [GO:0030847 "termination of RNA polymerase II
transcription, exosome-dependent" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0004300 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
KO:K14962 EMBL:AACQ01000185 EMBL:AACQ01000184 RefSeq:XP_711732.1
RefSeq:XP_711754.1 ProteinModelPortal:Q59PV3 STRING:Q59PV3
GeneID:3646650 GeneID:3646677 KEGG:cal:CaO19.10306
KEGG:cal:CaO19.2790 Uniprot:Q59PV3
Length = 364
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAF 62
+NR LRYFKGHK +V S+ ++PV+ +F+S S D +V++WDL+ ++ G L + + F
Sbjct: 123 NNRYLRYFKGHKAQVSSIEVNPVDKTFLSSSYDGTVKLWDLKSSSAVGNLEVGQNSVIGF 182
Query: 63 DQQGLVFAVAM----EAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCD-IKFSNDGKSMLL 117
D G+VFA+ E G + L+D +++DK PF + ++ + ++FSN+GK +L+
Sbjct: 183 DPHGVVFAIGKYSQGETGTVSLYDLKTFDKAPFLHVEIPILPGQIWNKLEFSNNGKLILI 242
Query: 118 TTTNNNIYVLDAYGGEK----RCGFSLEPSPNTNTE-------ATFTPDGQYVVSGSGDG 166
+T + YVLD+Y GE R S N + TF+P G+Y++ G+
Sbjct: 243 STDSAEHYVLDSYSGELLAVVRLAIGSVASNNWMSFKYPYTGCCTFSPCGKYLLVGTPKS 302
Query: 167 TLHAWNIN 174
T++ ++++
Sbjct: 303 TINIYDVS 310
>UNIPROTKB|G4N7I7 [details] [associations]
symbol:MGG_06406 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CM001234
KO:K14962 RefSeq:XP_003717163.1 ProteinModelPortal:G4N7I7
EnsemblFungi:MGG_06406T0 GeneID:2684561 KEGG:mgr:MGG_06406
Uniprot:G4N7I7
Length = 373
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 71/203 (34%), Positives = 102/203 (50%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
+DN +RYF+GHK+ V +L M P D+F+S S D++VR+WD+R G L L +A
Sbjct: 127 FDNSFIRYFEGHKDAVTNLEMHPGGDNFLSASRDNTVRLWDIRSKNAVGQLFLNTPYLLA 186
Query: 62 FDQQGLVFAVAM-EAGAIKLFDSRSYDKGPFDTFLVGGDTAEV---------CDIKFSND 111
+D G VFAV +G+I L+D ++Y+K PF TF + EV ++FSND
Sbjct: 187 WDPSGEVFAVGSPRSGSILLYDYKNYNKAPFATFDIVEACKEVDPSRLLQGWTKLEFSND 246
Query: 112 GKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTL--- 168
GK +LL T +LDA+ G+ + +P T+ A G V SGD
Sbjct: 247 GKCILLGTDGTGHLLLDAFDGKLKANLR-KPDSGTSRVAPGEGSGHGDVESSGDCCFTPD 305
Query: 169 --HAWNINTRNEVACW--NGNIG 187
N V+ W NG +G
Sbjct: 306 GRFVMGANRGQNVSVWDVNGAVG 328
>UNIPROTKB|C9JBU3 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051568 "histone H3-K4
methylation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
GO:GO:0005634 Gene3D:2.130.10.10 GO:GO:0051568 HGNC:HGNC:28826
ChiTaRS:WDR82 EMBL:AC092045 IPI:IPI00797468
ProteinModelPortal:C9JBU3 SMR:C9JBU3 STRING:C9JBU3
Ensembl:ENST00000469000 ArrayExpress:C9JBU3 Bgee:C9JBU3
Uniprot:C9JBU3
Length = 74
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 40/73 (54%), Positives = 58/73 (79%)
Query: 22 MSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLF 81
MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+FA + + +KL+
Sbjct: 1 MSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLY 60
Query: 82 DSRSYDKGPFDTF 94
D RS+DKGPF TF
Sbjct: 61 DLRSFDKGPFATF 73
>ASPGD|ASPL0000060719 [details] [associations]
symbol:AN0065 species:162425 "Emericella nidulans"
[GO:0030846 "termination of RNA polymerase II transcription,
poly(A)-coupled" evidence=IEA] [GO:0031126 "snoRNA 3'-end
processing" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IEA]
[GO:0034729 "histone H3-K79 methylation" evidence=IEA] [GO:0030847
"termination of RNA polymerase II transcription, exosome-dependent"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0048188 "Set1C/COMPASS complex" evidence=IEA]
[GO:0005847 "mRNA cleavage and polyadenylation specificity factor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 EMBL:AACD01000003
KO:K14962 HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 OMA:CTNMAFW
RefSeq:XP_657669.1 ProteinModelPortal:Q5BHB5 STRING:Q5BHB5
EnsemblFungi:CADANIAT00002687 GeneID:2875841 KEGG:ani:AN0065.2
Uniprot:Q5BHB5
Length = 364
Score = 235 (87.8 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 66/196 (33%), Positives = 97/196 (49%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
++ +RYF GH ++V L +SP +DS +S S D +V IWDL QG L+L V
Sbjct: 115 LHSESYIRYFSGHTDKVTCLALSPGSDSVISCSKDDTVSIWDLGSRYAQGKLKLSTPYLV 174
Query: 61 AFDQQGLVFAVAMEA-GAIKLFDSRSYDKGPFDTF-LVGGD---TAEV-----CDIKFSN 110
AFD V A+A ++ +I L+D R+YDK PF TF L + T ++FSN
Sbjct: 175 AFDPSASVIAIASQSTSSILLYDFRNYDKSPFSTFDLAKYEERYTPSTRGRAWTRLEFSN 234
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRC---GFSLEPSPNTNTEATFTPDGQYVVSGSGDGT 167
DGK +L+ T + +VLDA+ GE + G + P T P GQ + DG
Sbjct: 235 DGKYLLVGTDYHGHFVLDAFEGELKAFLVGKNGSPGRAAPVSTTGKPLGQGDACFTPDGR 294
Query: 168 LHAWNINTRNEVACWN 183
+++ W+
Sbjct: 295 YVIGGSGDHHDLLVWD 310
>POMBASE|SPAC824.04 [details] [associations]
symbol:SPAC824.04 "WD repeat protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005847 "mRNA
cleavage and polyadenylation specificity factor complex"
evidence=IDA] [GO:0006378 "mRNA polyadenylation" evidence=IC]
[GO:0006379 "mRNA cleavage" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC824.04 GO:GO:0005829
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 GO:GO:0005847 GO:GO:0006379
HOGENOM:HOG000176477 OrthoDB:EOG44BFB3 PIR:T39105
RefSeq:NP_593443.1 ProteinModelPortal:Q9UT39 STRING:Q9UT39
EnsemblFungi:SPAC824.04.1 GeneID:2542845 KEGG:spo:SPAC824.04
OMA:LRANACK NextBio:20803886 Uniprot:Q9UT39
Length = 341
Score = 226 (84.6 bits), Expect = 8.5e-19, P = 8.5e-19
Identities = 54/146 (36%), Positives = 82/146 (56%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA-CQGILRLRGRPT 59
+YDN+ + YF GH + V S+ +SP+ D F+S + D ++++W + ++ C G L L
Sbjct: 95 IYDNKRISYFSGHTDIVSSIEVSPIEDQFVSTANDKTLKLWKMNQSSRCLGNLDLPSLGI 154
Query: 60 VAFDQQGLVFAVAMEA-GAIKLFDSRSYDKGPFDTFLVGGDT-----------AEVCDIK 107
A+D GLVFAVA + I L+D R+Y PF TF + E ++
Sbjct: 155 PAYDPTGLVFAVACHSLSRIFLYDVRNYGSDPFSTFTIDDSRYLSRFSFPPMMPEWKHME 214
Query: 108 FSNDGKSMLLTTTNNNIYVLDAYGGE 133
FSNDGK +LL+T N Y+LDA+ G+
Sbjct: 215 FSNDGKCILLSTRANVHYILDAFSGD 240
Score = 158 (60.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 52/161 (32%), Positives = 73/161 (45%)
Query: 78 IKLFDSRSYDKGPFDTFLVGGDT-----------AEVCDIKFSNDGKSMLLTTTNNNIYV 126
I L+D R+Y PF TF + E ++FSNDGK +LL+T N Y+
Sbjct: 174 IFLYDVRNYGSDPFSTFTIDDSRYLSRFSFPPMMPEWKHMEFSNDGKCILLSTRANVHYI 233
Query: 127 LDAYGGE--KRC-GFSLEPSPNT--NTEATFTPDGQYVVSGSGDGTLHAWNIN------- 174
LDA+ G+ R F P N TF P G +V+ + D TL+ WN+
Sbjct: 234 LDAFSGDVLSRLEDFQELPFSNNFHGGSTTFVPQGNFVIGSADDRTLNVWNLRHTFHHKG 293
Query: 175 -TRN-EVACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIP 213
TR E + +I +K+ PR + A S L FW+P
Sbjct: 294 KTRPPEHRIVSQSIINPGLVKYNPRYDQLLTAGSQLVFWLP 334
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 206 (77.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--F 62
+ L+ KGH V +P ++ +SGS D SVRIWD++ C L P A F
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + + G +++D+ S G L+ D V +KFS +GK +L T +N
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ ++ + A F+ G+++VSGS D ++ WN+ T+ V
Sbjct: 237 TLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQK 296
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ VV P + +A+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAA 320
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S ++ +S S D +++IWD+ C + L+G
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYV 132
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D ++ G T D V + F+ DG +
Sbjct: 133 FCCNFNPQSNLIVSGSFDE-SVRIWDVKT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 186
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWN 172
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+
Sbjct: 187 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 242
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 206 (77.6 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 55/197 (27%), Positives = 98/197 (49%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAF 62
++++ KGHKE V + +P ++ +SGS D +VRIWD+ C ++ P V F
Sbjct: 121 KMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHF 180
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + G ++++D+ + G + D EV +KFS +GK +L T +N
Sbjct: 181 NRDGTLVVSGSYDGTVRIWDTTT---GQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDN 237
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTN--TEATFTPD-GQYVVSGSGDGTLHAWNINTRNEV 179
+ L +Y K+C + N +TF+ G+++V+GS D ++ +N+ TR V
Sbjct: 238 TLR-LWSYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIV 296
Query: 180 ACWNGNIGVVACLKWAP 196
G+ VV + P
Sbjct: 297 QTLAGHEDVVLTVACHP 313
Score = 151 (58.2 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 58/219 (26%), Positives = 92/219 (42%)
Query: 4 NRILRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGRPTV 60
N IL+Y KGH + + S+ SP S S D +++IW + L G +
Sbjct: 35 NYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI 94
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
A+ Q + A + IK++D S G L G V + F+ ++ +
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVES---GKMVKTLKG-HKEYVFGVSFNPQSNLIVSGSF 150
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR---N 177
+ N+ + D GE S P T F DG VVSGS DGT+ W+ T N
Sbjct: 151 DENVRIWDVNTGECTKMISAHSDPVTGVH--FNRDGTLVVSGSYDGTVRIWDTTTGQLLN 208
Query: 178 EVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFWIPN 214
++ +G V+ +K++P +A + + L W N
Sbjct: 209 TISTEDGK--EVSFVKFSPNGKFVLAGTLDNTLRLWSYN 245
Score = 144 (55.7 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 45/195 (23%), Positives = 86/195 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + R +GHKE + + S + S S D +++IWD V + + + L+G
Sbjct: 76 YDGKFERTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWD--VESGKMVKTLKGHKEYV 133
Query: 62 FDQQGLVFAVAMEAGAIKLFDS--RSYDKGPFD-TFLVGGDTAEVCDIKFSNDGKSMLLT 118
F G+ F FD R +D + T ++ + V + F+ DG ++
Sbjct: 134 F---GVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSG 190
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + + + D G+ S E + F+P+G++V++G+ D TL W+ N +
Sbjct: 191 SYDGTVRIWDTTTGQLLNTISTEDGKEVSF-VKFSPNGKFVLAGTLDNTLRLWSYNNNKK 249
Query: 179 -VACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 250 CLKTYTGHKNEKYCI 264
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 207 (77.9 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 56/202 (27%), Positives = 94/202 (46%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--FDQ 64
L+ KGH V +P ++ +SGS D SVRIWD+R C L P A F++
Sbjct: 149 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNR 208
Query: 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
G + + G +++D+ S G L+ D V +KFS +GK +L T +N +
Sbjct: 209 DGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTL 265
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
+ D G+ ++ + A F+ G+++VSGS D ++ WN+ ++ V
Sbjct: 266 KLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQ 325
Query: 184 GNIGVVACLKWAPRRAMFVAAS 205
G+ V C P + +A+
Sbjct: 326 GHTDTVLCTACHPTENIIASAA 347
Score = 118 (46.6 bits), Expect = 0.00010, P = 0.00010
Identities = 41/198 (20%), Positives = 88/198 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S + +SGS D ++++W+L + + L+G
Sbjct: 102 YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTG--KSLKTLKGHSNYV 159
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D R+ G T D V + F+ DG +
Sbjct: 160 FCCNFNPQSNLIVSGSFDE-SVRIWDVRT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 213
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNIN 174
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+ +
Sbjct: 214 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 271
Query: 175 TRNEVACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 272 KGKCLKTYTGHKNEKYCI 289
Score = 114 (45.2 bits), Expect = 0.00030, P = 0.00030
Identities = 33/115 (28%), Positives = 55/115 (47%)
Query: 94 FLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG--EKRC-GFSLEPSPNTNTEA 150
F + G T V +KFS +G+ + ++ + I + AY G EK G L S +
Sbjct: 66 FTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-----DV 120
Query: 151 TFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS 205
++ D + +VSGS D TL W ++T + G+ V C + P+ + V+ S
Sbjct: 121 AWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 175
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 202 (76.2 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--F 62
+ L+ KGH V +P ++ +SGS D SVRIWD++ C L P A F
Sbjct: 94 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 153
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + + G +++D+ S G L+ D V +KFS +GK +L T +N
Sbjct: 154 NRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 210
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ ++ + A F+ G+++VSGS D ++ WN+ T+ V
Sbjct: 211 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 270
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ VV P + +A+
Sbjct: 271 LQGHTDVVISTACHPTENIIASAA 294
Score = 119 (46.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/198 (20%), Positives = 88/198 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S ++ +S S D +++IWD+ C + L+G
Sbjct: 49 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYV 106
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D ++ G T D V + F+ DG +
Sbjct: 107 FCCNFNPQSNLIVSGSFDE-SVRIWDVKT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 160
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNIN 174
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+ +
Sbjct: 161 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 218
Query: 175 TRNEVACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 219 KGKCLKTYTGHKNEKYCI 236
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 202 (76.2 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--F 62
+ L+ KGH V +P ++ +SGS D SVRIWD++ C L P A F
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + + G +++D+ S G L+ D V +KFS +GK +L T +N
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ ++ + A F+ G+++VSGS D ++ WN+ T+ V
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ VV P + +A+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAA 320
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 41/198 (20%), Positives = 88/198 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S ++ +S S D +++IWD+ C + L+G
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYV 132
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D ++ G T D V + F+ DG +
Sbjct: 133 FCCNFNPQSNLIVSGSFDE-SVRIWDVKT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 186
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNIN 174
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+ +
Sbjct: 187 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 175 TRNEVACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 245 KGKCLKTYTGHKNEKYCI 262
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 202 (76.2 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--F 62
+ L+ KGH V +P ++ +SGS D SVRIWD++ C L P A F
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + + G +++D+ S G L+ D V +KFS +GK +L T +N
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ ++ + A F+ G+++VSGS D ++ WN+ T+ V
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ VV P + +A+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAA 320
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 41/198 (20%), Positives = 88/198 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S ++ +S S D +++IWD+ C + L+G
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYV 132
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D ++ G T D V + F+ DG +
Sbjct: 133 FCCNFNPQSNLIVSGSFDE-SVRIWDVKT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 186
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNIN 174
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+ +
Sbjct: 187 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 175 TRNEVACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 245 KGKCLKTYTGHKNEKYCI 262
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 202 (76.2 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--F 62
+ L+ KGH V +P ++ +SGS D SVRIWD++ C L P A F
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + + G +++D+ S G L+ D V +KFS +GK +L T +N
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ ++ + A F+ G+++VSGS D ++ WN+ T+ V
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ VV P + +A+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAA 320
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 41/198 (20%), Positives = 88/198 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S ++ +S S D +++IWD+ C + L+G
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYV 132
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D ++ G T D V + F+ DG +
Sbjct: 133 FCCNFNPQSNLIVSGSFDE-SVRIWDVKT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 186
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNIN 174
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+ +
Sbjct: 187 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 175 TRNEVACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 245 KGKCLKTYTGHKNEKYCI 262
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 202 (76.2 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--F 62
+ L+ KGH V +P ++ +SGS D SVRIWD++ C L P A F
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + + G +++D+ S G L+ D V +KFS +GK +L T +N
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ ++ + A F+ G+++VSGS D ++ WN+ T+ V
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ VV P + +A+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAA 320
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 41/198 (20%), Positives = 88/198 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S ++ +S S D +++IWD+ C + L+G
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYV 132
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D ++ G T D V + F+ DG +
Sbjct: 133 FCCNFNPQSNLIVSGSFDE-SVRIWDVKT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 186
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNIN 174
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+ +
Sbjct: 187 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 175 TRNEVACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 245 KGKCLKTYTGHKNEKYCI 262
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 202 (76.2 bits), Expect = 5.2e-16, P = 5.2e-16
Identities = 56/204 (27%), Positives = 95/204 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--F 62
+ L+ KGH V +P ++ +SGS D SVRIWD++ C L P A F
Sbjct: 120 KCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 179
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + + G +++D+ S G L+ D V +KFS +GK +L T +N
Sbjct: 180 NRDGSLIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDN 236
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ ++ + A F+ G+++VSGS D ++ WN+ T+ V
Sbjct: 237 TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQK 296
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ VV P + +A+
Sbjct: 297 LQGHTDVVISTACHPTENIIASAA 320
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 41/198 (20%), Positives = 88/198 (44%)
Query: 2 YDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
YD + + GHK + + S ++ +S S D +++IWD+ C + L+G
Sbjct: 75 YDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC--LKTLKGHSNYV 132
Query: 62 F-----DQQGLVFAVAMEAGAIKLFDSRSYDKGP-FDTFLVGGDTAEVCDIKFSNDGKSM 115
F Q L+ + + + +++++D ++ G T D V + F+ DG +
Sbjct: 133 FCCNFNPQSNLIVSGSFDE-SVRIWDVKT---GKCLKTLPAHSDP--VSAVHFNRDGSLI 186
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNIN 174
+ ++ + + D G+ C +L N F+P+G+Y+++ + D TL W+ +
Sbjct: 187 VSSSYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 244
Query: 175 TRNEVACWNGNIGVVACL 192
+ + G+ C+
Sbjct: 245 KGKCLKTYTGHKNEKYCI 262
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 202 (76.2 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 51/185 (27%), Positives = 91/185 (49%)
Query: 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VA 61
+R+ + KGH V +P + +SGS D SVRIWD++ C L P V+
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVS 220
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
F++ G + A G ++++D+ + G LV + V +KFS +GK +L + +
Sbjct: 221 FNRDGSLIASGSYDGLVRIWDTAN---GQCIKTLVDDENPPVAFVKFSPNGKYILASNLD 277
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVA 180
+ + + D G+ ++ + A F+ G++++SGS D ++ WN+ TR V
Sbjct: 278 STLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQ 337
Query: 181 CWNGN 185
C G+
Sbjct: 338 CLEGH 342
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 202 (76.2 bits), Expect = 8.9e-16, P = 8.9e-16
Identities = 51/185 (27%), Positives = 91/185 (49%)
Query: 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VA 61
+R+ + KGH V +P + +SGS D SVRIWD++ C L P V+
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVS 220
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
F++ G + A G ++++D+ + G LV + V +KFS +GK +L + +
Sbjct: 221 FNRDGSLIASGSYDGLVRIWDTAN---GQCIKTLVDDENPPVAFVKFSPNGKYILASNLD 277
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVA 180
+ + + D G+ ++ + A F+ G++++SGS D ++ WN+ TR V
Sbjct: 278 STLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQ 337
Query: 181 CWNGN 185
C G+
Sbjct: 338 CLEGH 342
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 192 (72.6 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 52/204 (25%), Positives = 93/204 (45%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAF 62
++ + KGH V +P + +SGS D SVRIWD+R C L P V+F
Sbjct: 154 KMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSF 213
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
++ G + G ++++D+ + G LV + V +KFS +GK +L + +N
Sbjct: 214 NRDGSLITSGSYDGLVRIWDTAN---GQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDN 270
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + D G+ + + A F+ G++++SGS D ++ WN+ T+ V
Sbjct: 271 TLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQS 330
Query: 182 WNGNIGVVACLKWAPRRAMFVAAS 205
G+ V P + M + +
Sbjct: 331 LEGHTQAVIASDCHPMQNMIASGA 354
>ZFIN|ZDB-GENE-040808-14 [details] [associations]
symbol:thoc3 "THO complex 3" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040808-14 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 KO:K12880
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BX511257 EMBL:BC079495 EMBL:BC152622
IPI:IPI00485776 RefSeq:NP_001003758.1 UniGene:Dr.78573
STRING:Q6AXK9 Ensembl:ENSDART00000079016 GeneID:445302
KEGG:dre:445302 InParanoid:Q6AXK9 NextBio:20832048 Uniprot:Q6AXK9
Length = 322
Score = 189 (71.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 53/198 (26%), Positives = 89/198 (44%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 66 YRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICWSPDGQ 125
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 126 TIAVGNKDDVVTFIDAKTHRPRAEEQFKF-----EVNEISWNNDNDMFFLTNGNGCINIL 180
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y E + S+ P+ F P G+Y +GS D + WN+ V C++
Sbjct: 181 -SYP-ELKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWNVEELVCVRCFSRLDW 238
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 239 PVRTLSFSHDGKMLASAS 256
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 188 (71.2 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 52/197 (26%), Positives = 97/197 (49%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQ 64
L+ +GH V + +P ++ +SGS D ++RIW+++ C +++ P +V F++
Sbjct: 121 LKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNR 180
Query: 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
G + A G+ K++D++ +G L+ + V KFS +GK +L+ T ++ +
Sbjct: 181 DGSLIVSASHDGSCKIWDAK---EGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTL 237
Query: 125 YVLDAYGGEKRCGFSLEPSPNTN-----TEATFTPDGQYVVSGSGDGTLHAWNINTRNEV 179
L Y K F + +TN T A +G+Y+VSGS D ++ W++ RN +
Sbjct: 238 K-LSNYATGK---FLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNIL 293
Query: 180 ACWNGNIGVVACLKWAP 196
G+ V + P
Sbjct: 294 QRLEGHTDAVISVSCHP 310
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 187 (70.9 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 58/210 (27%), Positives = 95/210 (45%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-- 58
M + L+ KGH + V +P ++ +SGS D SV+IW+++ C L P
Sbjct: 110 MRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPIS 169
Query: 59 TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F+ G + G +++D+ S G L V +KFS +GK +L
Sbjct: 170 AVNFNCNGSLIVSGSYDGLCRIWDAAS---GQCLRTLADEGNPPVSFVKFSPNGKYILTA 226
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTN--TEATFTPDGQ-YVVSGSGDGTLHAWNINT 175
T +N + + D G RC + N A+F+ G+ +VVSGS D ++ WN+ T
Sbjct: 227 TLDNTLKLWDYSRG--RCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQT 284
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAAS 205
+ V G+ VV P + + +A+
Sbjct: 285 KEIVQRLQGHTDVVISAACHPTKNIIASAA 314
>UNIPROTKB|Q29RH4 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 KO:K12880 GO:GO:0003723 GO:GO:0051028 EMBL:BC114172
IPI:IPI00732803 RefSeq:NP_001039765.1 UniGene:Bt.3953
ProteinModelPortal:Q29RH4 GeneID:529231 KEGG:bta:529231 CTD:84321
HOVERGEN:HBG059732 NextBio:20874992 InterPro:IPR011659 Pfam:PF07676
Uniprot:Q29RH4
Length = 351
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQ 154
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 155 TIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EVNEISWNNDNNMFFLTNGNGCINIL 209
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y E + S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 210 -SYP-ELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDW 267
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 268 PVRTLSFSHDGKMLASAS 285
>UNIPROTKB|E2RC43 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046784 "intronless viral mRNA export from
host nucleus" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 InterPro:IPR011659
Pfam:PF07676 OMA:LAYACDD EMBL:AAEX03002980 RefSeq:XP_537899.2
ProteinModelPortal:E2RC43 Ensembl:ENSCAFT00000022750 GeneID:480781
KEGG:cfa:480781 NextBio:20855728 Uniprot:E2RC43
Length = 351
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQ 154
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 155 TIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EVNEISWNNDNNMFFLTNGNGCINIL 209
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y E + S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 210 -SYP-ELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDW 267
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 268 PVRTLSFSHDGKMLASAS 285
>UNIPROTKB|Q96J01 [details] [associations]
symbol:THOC3 "THO complex subunit 3" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IDA] [GO:0000346
"transcription export complex" evidence=IDA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
KO:K12880 GO:GO:0003723 GO:GO:0000346 GO:GO:0046784 CTD:84321
HOVERGEN:HBG059732 InterPro:IPR011659 Pfam:PF07676 EMBL:AC138965
EMBL:BC006849 EMBL:BC068499 IPI:IPI00063729 RefSeq:NP_115737.1
UniGene:Hs.484227 UniGene:Hs.715943 ProteinModelPortal:Q96J01
SMR:Q96J01 IntAct:Q96J01 STRING:Q96J01 PhosphoSite:Q96J01
DMDM:48474597 PaxDb:Q96J01 PRIDE:Q96J01 DNASU:84321
Ensembl:ENST00000265097 GeneID:84321 KEGG:hsa:84321 UCSC:uc003mdg.4
GeneCards:GC05M175344 HGNC:HGNC:19072 HPA:HPA042764 HPA:HPA044009
HPA:HPA045071 MIM:606929 neXtProt:NX_Q96J01 PharmGKB:PA134893535
HOGENOM:HOG000264781 InParanoid:Q96J01 OMA:LAYACDD
OrthoDB:EOG49ZXPJ PhylomeDB:Q96J01 ChiTaRS:THOC3 GenomeRNAi:84321
NextBio:74048 ArrayExpress:Q96J01 Bgee:Q96J01 CleanEx:HS_THOC3
Genevestigator:Q96J01 GermOnline:ENSG00000051596 Uniprot:Q96J01
Length = 351
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQ 154
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 155 TIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EVNEISWNNDNNMFFLTNGNGCINIL 209
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y E + S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 210 -SYP-ELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDW 267
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 268 PVRTLSFSHDGKMLASAS 285
>UNIPROTKB|F1S386 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 KO:K12880 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:CU993810 RefSeq:XP_003123712.1
Ensembl:ENSSSCT00000015360 GeneID:100524425 KEGG:ssc:100524425
Uniprot:F1S386
Length = 351
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQ 154
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 155 TIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EVNEISWNNDNNMFFLTNGNGCINIL 209
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y E + S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 210 -SYP-ELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDW 267
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 268 PVRTLSFSHDGKMLASAS 285
>MGI|MGI:1920916 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10090 "Mus musculus"
[GO:0000346 "transcription export complex" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=ISO]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1920916 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 KO:K12880
GO:GO:0003723 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:AK010668 EMBL:BC019603 IPI:IPI00311904
RefSeq:NP_082873.2 UniGene:Mm.292487 ProteinModelPortal:Q8VE80
SMR:Q8VE80 PhosphoSite:Q8VE80 PaxDb:Q8VE80 PRIDE:Q8VE80
Ensembl:ENSMUST00000026990 GeneID:73666 KEGG:mmu:73666
UCSC:uc007qod.2 InParanoid:Q8VE80 NextBio:338741 Bgee:Q8VE80
CleanEx:MM_THOC3 Genevestigator:Q8VE80
GermOnline:ENSMUSG00000025872 Uniprot:Q8VE80
Length = 351
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQ 154
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 155 TIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EVNEISWNNDNNMFFLTNGNGCINIL 209
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y E + S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 210 -SYP-ELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDW 267
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 268 PVRTLSFSHDGKMLASAS 285
>RGD|1311669 [details] [associations]
symbol:Thoc3 "THO complex 3" species:10116 "Rattus norvegicus"
[GO:0000346 "transcription export complex" evidence=IEA;ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311669 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 EMBL:CH474032
GeneTree:ENSGT00700000104559 CTD:84321 HOVERGEN:HBG059732
InterPro:IPR011659 Pfam:PF07676 HOGENOM:HOG000264781 OMA:LAYACDD
OrthoDB:EOG49ZXPJ EMBL:BC168852 IPI:IPI00364620
RefSeq:NP_001099529.1 UniGene:Rn.101956 STRING:B5DEY5
Ensembl:ENSRNOT00000000116 GeneID:290519 KEGG:rno:290519
UCSC:RGD:1311669 NextBio:631152 Genevestigator:B5DEY5
Uniprot:B5DEY5
Length = 351
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 52/198 (26%), Positives = 90/198 (45%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQ 154
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 155 TIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EVNEISWNNDNNMFFLTNGNGCINIL 209
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y E + S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 210 -SYP-ELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDW 267
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 268 PVRTLSFSHDGKMLASAS 285
>UNIPROTKB|F1NUQ0 [details] [associations]
symbol:THOC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000346 "transcription export complex" evidence=IEA]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006406 GO:GO:0000346
GeneTree:ENSGT00700000104559 InterPro:IPR011659 Pfam:PF07676
OMA:LAYACDD EMBL:AADN02028708 IPI:IPI00595007
Ensembl:ENSGALT00000040847 Uniprot:F1NUQ0
Length = 381
Score = 179 (68.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 52/198 (26%), Positives = 89/198 (44%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + G
Sbjct: 67 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINICWSPDGQ 126
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + + D++++ + F EV +I ++ND LT N I +L
Sbjct: 127 TIAVGNKDDVVTFIDAKTHRSKAEEQFKF-----EVNEISWNNDNNMFFLTNGNGCINIL 181
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+Y K S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 182 -SYPELKPIQ-SINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDW 239
Query: 188 VVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 240 PVRTLSFSHDGKMLASAS 257
>FB|FBgn0037569 [details] [associations]
symbol:tex "tex" species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 InterPro:IPR011659
Pfam:PF07676 EMBL:AY118857 ProteinModelPortal:Q8MSF3 SMR:Q8MSF3
STRING:Q8MSF3 PaxDb:Q8MSF3 PRIDE:Q8MSF3 FlyBase:FBgn0037569
InParanoid:Q8MSF3 OrthoDB:EOG4FJ6RC ArrayExpress:Q8MSF3 Bgee:Q8MSF3
Uniprot:Q8MSF3
Length = 320
Score = 173 (66.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 53/194 (27%), Positives = 85/194 (43%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGL 67
++GH V LC N D F + S D +VRIWD+RV C + +G +A+ G
Sbjct: 68 YRGHTASVDQLCWHRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENINIAWSPDGK 127
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
AV + I D+R+ + F + EV +I ++N LT +++L
Sbjct: 128 TIAVGNKEDLITFIDTRTNKIRVEEPF-----SFEVNEISWNNTNDLFFLTNGLGCMHIL 182
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
E + P+ E F P G+Y +GS D + W+ N E+AC +
Sbjct: 183 SYPSLEHQMTLKAHPANCICIE--FGPTGKYFATGSADAQVSLWDAN---ELAC----LR 233
Query: 188 VVACLKWAPRRAMF 201
+++ L+W R F
Sbjct: 234 MISRLEWPVRTISF 247
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVAFD 63
RI++ +GH++ + SL P D +SGS D SVRIWDLR + C L + G TVA
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVS 347
Query: 64 QQGLVFAVAMEAGAIKLFDSRS-YDKGPFDTFLVGGDTAE--VCDIKFSNDGKSMLLTTT 120
G + A ++++DS + + D+ G+ E V + FSN+G+ + +
Sbjct: 348 PDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSL 407
Query: 121 NNNIYVLDAYG-GEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN 177
+ + + G +K+ C + + TPD +Y++SGS D + W+ + N
Sbjct: 408 DRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGN 467
Query: 178 EVACWNGN 185
+ G+
Sbjct: 468 PLLMLQGH 475
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 177 (67.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 52/188 (27%), Positives = 90/188 (47%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVAFD 63
RI++ +GH++ + SL P D +SGS D SVRIWDLR + C L + G TVA
Sbjct: 288 RIIKILRGHEQDIYSLDFFPDGDRLVSGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVS 347
Query: 64 QQGLVFAVAMEAGAIKLFDSRS-YDKGPFDTFLVGGDTAE--VCDIKFSNDGKSMLLTTT 120
G + A ++++DS + + D+ G+ E V + FSN+G+ + +
Sbjct: 348 PDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSL 407
Query: 121 NNNIYVLDAYG-GEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN 177
+ + + G +K+ C + + TPD +Y++SGS D + W+ + N
Sbjct: 408 DRTVKLWHLEGKSDKKSTCEVTYIGHKDFVLSVCCTPDNEYILSGSKDRGVIFWDQASGN 467
Query: 178 EVACWNGN 185
+ G+
Sbjct: 468 PLLMLQGH 475
>UNIPROTKB|C9J355 [details] [associations]
symbol:WDR82 "WD repeat-containing protein 82" species:9606
"Homo sapiens" [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0051568 "histone H3-K4
methylation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
GO:GO:0005634 Gene3D:2.130.10.10 GO:GO:0051568 HGNC:HGNC:28826
ChiTaRS:WDR82 EMBL:AC092045 IPI:IPI00947344
ProteinModelPortal:C9J355 SMR:C9J355 STRING:C9J355
Ensembl:ENST00000463624 ArrayExpress:C9J355 Bgee:C9J355
Uniprot:C9J355
Length = 47
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 22 MSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLV 68
MSPV+D+F+SGSLD ++R+WDLR CQG++ L+G+P +FD +GL+
Sbjct: 1 MSPVDDTFISGSLDKTIRLWDLRSPNCQGLMHLQGKPVCSFDPEGLI 47
>UNIPROTKB|B3KPU1 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246 EMBL:AC009488
HOGENOM:HOG000176356 HOVERGEN:HBG000188 UniGene:Hs.185172
HGNC:HGNC:4398 EMBL:AK056750 IPI:IPI00924758 SMR:B3KPU1
STRING:B3KPU1 Ensembl:ENST00000419828 Ensembl:ENST00000427895
Uniprot:B3KPU1
Length = 240
Score = 164 (62.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG--ILRLRGRPTVAFDQQGL 67
F GH V+SL ++P +F+SG+ D S+++WD+R + C+ I VAF G
Sbjct: 80 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 139
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
F + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 140 AFTTGSDDATCRLFDLRA-DQ---ELLMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNC 194
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ DA G+ R G L N + T DG V +GS D L WN
Sbjct: 195 NIWDAMKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 169 (64.5 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 52/199 (26%), Positives = 99/199 (49%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQG-ILRLRGRPTVAF 62
R+ GH ++V ++ +S + + S + D ++++WDL C +L +
Sbjct: 300 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICL 359
Query: 63 DQQGL-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
GL VF+ M+ G ++L+D ++ G + + G +A V + S +G + +LT+
Sbjct: 360 SIDGLTVFSGHMD-GNLRLWDIQT---GKLLSEVAGHSSA-VTSVSLSRNG-NRILTSGR 413
Query: 122 NNIY-VLDAYGGEKRCGFSLEPSPN---TN-TEATFTPDGQYVVSGSGDGTLHAWNINTR 176
+N++ V D E CG +L S N +N + + +PD YV +GS DG++H W+++
Sbjct: 414 DNVHNVFDTRTLEI-CG-TLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKG 471
Query: 177 NEVACWNGNIGVVACLKWA 195
N V+ + C W+
Sbjct: 472 NIVSILKEQTSPILCCSWS 490
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 166 (63.5 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 45/203 (22%), Positives = 93/203 (45%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--FD 63
+++ GH + +P ++ +SGS D +VRIWD+ C +L P A F+
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFN 164
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
+ G + + G +++DS + G L+ + V ++FS +GK +L+ T +N
Sbjct: 165 RDGSLIVSSSYDGLCRIWDSGT---GHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNT 221
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFT-PDGQYVVSGSGDGTLHAWNINTRNEVACW 182
+ + + + ++ + + F+ +G+ +VSGS D +H W +N++ +
Sbjct: 222 LRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKL 281
Query: 183 NGNIGVVACLKWAPRRAMFVAAS 205
G+ V + P + + S
Sbjct: 282 EGHTETVMNVACHPTENLIASGS 304
Score = 114 (45.2 bits), Expect = 0.00024, P = 0.00024
Identities = 40/192 (20%), Positives = 85/192 (44%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAF-----DQ 64
F GH+ + + S +S S D ++++WD+ + I L G AF Q
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSL--IKTLIGHTNYAFCVNFNPQ 124
Query: 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
++ + + + ++++D + G L + V + F+ DG ++ ++ +
Sbjct: 125 SNMIVSGSFDE-TVRIWDVTT---GKCLKVLPA-HSDPVTAVDFNRDGSLIVSSSYDGLC 179
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTE-ATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
+ D+ G C +L N F+P+G++++ G+ D TL WNI++ + +
Sbjct: 180 RIWDS--GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYT 237
Query: 184 GNIGVVACLKWA 195
G++ C+ A
Sbjct: 238 GHVNAQYCISSA 249
>UNIPROTKB|E7EP32 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0005246 "calcium channel regulator activity" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007204 GO:GO:0005246
PRINTS:PR00319 EMBL:AC009488 InterPro:IPR016346 PIRSF:PIRSF002394
HGNC:HGNC:4398 IPI:IPI00925530 SMR:E7EP32 Ensembl:ENST00000424361
Ensembl:ENST00000436220 Uniprot:E7EP32
Length = 296
Score = 164 (62.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG--ILRLRGRPTVAFDQQGL 67
F GH V+SL ++P +F+SG+ D S+++WD+R + C+ I VAF G
Sbjct: 136 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 195
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
F + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 196 AFTTGSDDATCRLFDLRA-DQ---ELLMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNC 250
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ DA G+ R G L N + T DG V +GS D L WN
Sbjct: 251 NIWDAMKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 296
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 166 (63.5 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 56/208 (26%), Positives = 94/208 (45%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--- 59
D + R FKGH++ + SL SP SGS+D SV +W+++ + R G
Sbjct: 7 DPTLERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQS--RAYRFTGHKDAVT 64
Query: 60 -VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F + A + ++L+ KG ++ L T V + FS DG+S+L
Sbjct: 65 CVQFSPSAHLLASSSRDKTVRLWVPSV--KG--ESVLFRAHTGSVRSVCFSADGQSLLTA 120
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + +I + + + C +L N A F+PDGQ +VS S D T+ W+ ++R
Sbjct: 121 SDDQSIKLWSVHRQKIIC--TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQL 178
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAASS 206
+ + G + + + P ASS
Sbjct: 179 IHTFCEPGGYSSYVDFHPSSTCIATASS 206
Score = 112 (44.5 bits), Expect = 0.00066, P = 0.00066
Identities = 45/216 (20%), Positives = 85/216 (39%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGL 67
F+ H V S+C S S ++ S D S+++W + LR F G
Sbjct: 98 FRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQ 157
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ + +KL+D+ S + TF G + D F + +++N + V
Sbjct: 158 LMVSVSDDRTVKLWDASS--RQLIHTFCEPGGYSSYVD--FHPSSTCIATASSDNTVRVW 213
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D + + S N +F P G ++++ S D TL ++ + +G+ G
Sbjct: 214 DIRTHTLLQHYQVH-SAAVNA-LSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQG 271
Query: 188 VVACLKWAPRRAMFVAASSVLSFWIPNPSSNSTDES 223
+C+ ++ F +A S + + +S D S
Sbjct: 272 SASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYS 307
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 166 (63.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFD 63
RYFKGHK + SL +SP + S D + +W+ + +A R G +V F
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHA--RAYRYVGHKDVVTSVQFS 69
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
G + A A ++L+ +G F F TA V + FS DG+ + + + +
Sbjct: 70 PHGNLLASASRDRTVRLWIPDK--RGKFSEFKA--HTAPVRSVDFSADGQFLATASEDKS 125
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
I V Y +R +SL + A F+PDG+ +VS S D T+ W+ + V ++
Sbjct: 126 IKVWSMY--RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 184 GNIGVVACLKWAPRRAMFVAASS 206
++G + + P +A S
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGS 206
Score = 147 (56.8 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 55/204 (26%), Positives = 85/204 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIW--DLRVNACQGILRLRGRPTVAF 62
R RY GHK+ V S+ SP + S S D +VR+W D R + +V F
Sbjct: 52 RAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDF 110
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
G A A E +IK++ S + F + + T V KFS DG+ ++ + +
Sbjct: 111 SADGQFLATASEDKSIKVW---SMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
I + D K+C + S F P G + S D T+ W++ + +
Sbjct: 167 TIKIWDTTN--KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 183 NGNIGVVACLKWAPRRAMFVAASS 206
+ G V C+ + P V ASS
Sbjct: 225 QVHSGGVNCISFHPSDNYLVTASS 248
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 166 (63.5 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 55/203 (27%), Positives = 91/203 (44%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFD 63
RYFKGHK + SL +SP + S D + +W+ + +A R G +V F
Sbjct: 12 RYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHA--RAYRYVGHKDVVTSVQFS 69
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
G + A A ++L+ +G F F TA V + FS DG+ + + + +
Sbjct: 70 PHGNLLASASRDRTVRLWIPDK--RGKFSEFKA--HTAPVRSVDFSADGQFLATASEDKS 125
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
I V Y +R +SL + A F+PDG+ +VS S D T+ W+ + V ++
Sbjct: 126 IKVWSMY--RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 184 GNIGVVACLKWAPRRAMFVAASS 206
++G + + P +A S
Sbjct: 184 DSVGFANFVDFNPSGTCIASAGS 206
Score = 146 (56.5 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 54/204 (26%), Positives = 85/204 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIW--DLRVNACQGILRLRGRPTVAF 62
R RY GHK+ V S+ SP + S S D +VR+W D R + +V F
Sbjct: 52 RAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDF 110
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
G A A E +IK++ S + F + + T V KFS DG+ ++ + +
Sbjct: 111 SADGQFLATASEDKSIKVW---SMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
I + D K+C + S F P G + S D T+ W++ + +
Sbjct: 167 TIKIWDTTN--KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 183 NGNIGVVACLKWAPRRAMFVAASS 206
+ G V C+ + P + ASS
Sbjct: 225 QVHSGGVNCISFHPSGNYLITASS 248
>UNIPROTKB|P11017 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9913 "Bos taurus"
[GO:0006184 "GTP catabolic process" evidence=IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC140489 EMBL:M16480 EMBL:M36431 EMBL:M16539
IPI:IPI00712819 PIR:A26617 RefSeq:NP_001091030.1 UniGene:Bt.2055
ProteinModelPortal:P11017 SMR:P11017 STRING:P11017 PRIDE:P11017
Ensembl:ENSBTAT00000008508 GeneID:281202 KEGG:bta:281202 CTD:2783
InParanoid:P11017 KO:K04537 OMA:WDIETSQ NextBio:20805258
Uniprot:P11017
Length = 340
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG--ILRLRGRPTVAFDQQGL 67
F GH V+SL ++P +F+SG+ D S+++WD+R + C+ I VAF G
Sbjct: 180 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
F + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 240 AFTTGSDDATCRLFDLRA-DQ---ELLMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ DA G+ R G L N + T DG V +GS D L WN
Sbjct: 295 NIWDAMKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|E2RD95 [details] [associations]
symbol:GNB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537
EMBL:AAEX03004274 RefSeq:XP_536861.2 ProteinModelPortal:E2RD95
SMR:E2RD95 PRIDE:E2RD95 Ensembl:ENSCAFT00000038242 GeneID:479733
KEGG:cfa:479733 NextBio:20854866 Uniprot:E2RD95
Length = 340
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG--ILRLRGRPTVAFDQQGL 67
F GH V+SL ++P +F+SG+ D S+++WD+R + C+ I VAF G
Sbjct: 180 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
F + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 240 AFTTGSDDATCRLFDLRA-DQ---ELLMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ DA G+ R G L N + T DG V +GS D L WN
Sbjct: 295 NIWDAMKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62879 [details] [associations]
symbol:GNB2 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005246
"calcium channel regulator activity" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051020 "GTPase binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0006112 "energy reserve metabolic process"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886 GO:GO:0048471
Reactome:REACT_111102 GO:GO:0043234 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0006112 GO:GO:0004871 GO:GO:0007204
EMBL:AF053356 GO:GO:0071377 GO:GO:0005246 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 HPA:HPA040736 CTD:2783
KO:K04537 OMA:WDIETSQ EMBL:M16514 EMBL:M36429 EMBL:M16538
EMBL:AF501883 EMBL:BC010073 EMBL:BC012348 EMBL:BC068003
IPI:IPI00003348 PIR:B26617 RefSeq:NP_005264.2 UniGene:Hs.185172
ProteinModelPortal:P62879 SMR:P62879 IntAct:P62879
MINT:MINT-1139073 STRING:P62879 PhosphoSite:P62879 DMDM:51317304
OGP:P62879 REPRODUCTION-2DPAGE:P62879 PaxDb:P62879 PRIDE:P62879
DNASU:2783 Ensembl:ENST00000303210 Ensembl:ENST00000393924
Ensembl:ENST00000393926 GeneID:2783 KEGG:hsa:2783 UCSC:uc003uwb.3
GeneCards:GC07P100271 HGNC:HGNC:4398 HPA:CAB010032 MIM:139390
neXtProt:NX_P62879 PharmGKB:PA28778 InParanoid:P62879
PhylomeDB:P62879 GenomeRNAi:2783 NextBio:10963 ArrayExpress:P62879
Bgee:P62879 CleanEx:HS_GNB2 Genevestigator:P62879
GermOnline:ENSG00000172354 Uniprot:P62879
Length = 340
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG--ILRLRGRPTVAFDQQGL 67
F GH V+SL ++P +F+SG+ D S+++WD+R + C+ I VAF G
Sbjct: 180 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
F + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 240 AFTTGSDDATCRLFDLRA-DQ---ELLMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ DA G+ R G L N + T DG V +GS D L WN
Sbjct: 295 NIWDAMKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>MGI|MGI:95784 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein),
beta 2" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005246 "calcium channel regulator activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISA] [GO:0006184 "GTP catabolic
process" evidence=ISA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=TAS] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044297 "cell body" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051020 "GTPase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:95784 GO:GO:0048471
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 EMBL:AF312033
GO:GO:0007204 GO:GO:0005246 PRINTS:PR00319 GO:GO:0005834
HOGENOM:HOG000176356 HOVERGEN:HBG000188 OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2783 KO:K04537 EMBL:U34960
EMBL:AB045007 EMBL:BC029077 EMBL:BC059942 EMBL:BC062178 EMBL:U38505
IPI:IPI00162780 RefSeq:NP_034442.1 UniGene:Mm.30141
ProteinModelPortal:P62880 SMR:P62880 IntAct:P62880 STRING:P62880
PhosphoSite:P62880 REPRODUCTION-2DPAGE:IPI00162780 PaxDb:P62880
PRIDE:P62880 Ensembl:ENSMUST00000031726 Ensembl:ENSMUST00000150063
GeneID:14693 KEGG:mmu:14693 InParanoid:P62880 ChiTaRS:GNB2
NextBio:286635 Bgee:P62880 Genevestigator:P62880
GermOnline:ENSMUSG00000029713 Uniprot:P62880
Length = 340
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG--ILRLRGRPTVAFDQQGL 67
F GH V+SL ++P +F+SG+ D S+++WD+R + C+ I VAF G
Sbjct: 180 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
F + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 240 AFTTGSDDATCRLFDLRA-DQ---ELLMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ DA G+ R G L N + T DG V +GS D L WN
Sbjct: 295 NIWDAMKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>RGD|1359321 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta polypeptide 4" species:10116 "Rattus norvegicus" [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0044297 "cell body"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 RGD:1359321 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
GO:GO:0044297 PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 EMBL:AY552804 EMBL:BC097370 EMBL:AF022085 IPI:IPI00422067
RefSeq:NP_001013932.1 UniGene:Rn.10844 ProteinModelPortal:O35353
SMR:O35353 IntAct:O35353 STRING:O35353 PhosphoSite:O35353
PRIDE:O35353 GeneID:294962 KEGG:rno:294962 UCSC:RGD:1359321
InParanoid:O35353 NextBio:638784 ArrayExpress:O35353
Genevestigator:O35353 Uniprot:O35353
Length = 340
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/168 (32%), Positives = 76/168 (45%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL--RLRGRPTVAFDQQGL 67
F GH V+SL +SP +F+SG+ D S ++WD+R C+ + V+F G
Sbjct: 180 FTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
FA + +LFD R+ D+ + L D +C I FS G+ +L + N
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ---ELLLYSHDNI-ICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
V DA G R G L N + T DG V +GS D L WN
Sbjct: 295 SVWDALKGG-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>RGD|69319 [details] [associations]
symbol:Gnb2 "guanine nucleotide binding protein (G protein), beta
polypeptide 2" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005246 "calcium channel
regulator activity" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0044297 "cell body" evidence=IDA] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO;ISS] [GO:0051020
"GTPase binding" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:69319
GO:GO:0048471 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0004871 GO:GO:0044297 GO:GO:0005246
PRINTS:PR00319 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2783 KO:K04537 OMA:WDIETSQ EMBL:U34959
EMBL:AF277892 EMBL:BC065579 IPI:IPI00212658 RefSeq:NP_112299.1
UniGene:Rn.1155 ProteinModelPortal:P54313 SMR:P54313 STRING:P54313
PhosphoSite:P54313 World-2DPAGE:0004:P54313 PRIDE:P54313
Ensembl:ENSRNOT00000001911 GeneID:81667 KEGG:rno:81667
UCSC:RGD:69319 InParanoid:P54313 NextBio:615252 ArrayExpress:P54313
Genevestigator:P54313 GermOnline:ENSRNOG00000001409 Uniprot:P54313
Length = 340
Score = 164 (62.8 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 52/168 (30%), Positives = 78/168 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG--ILRLRGRPTVAFDQQGL 67
F GH V+SL ++P +F+SG+ D S+++WD+R + C+ I VAF G
Sbjct: 180 FAGHSGDVMSLSLAPDGRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
F + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 240 AFTTGSDDATCRLFDLRA-DQ---ELLMYSHDNI-ICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ DA G+ R G L N + T DG V +GS D L WN
Sbjct: 295 NIWDAMKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|Q9HAV0 [details] [associations]
symbol:GNB4 "Guanine nucleotide-binding protein subunit
beta-4" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006112 "energy reserve metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006112 GO:GO:0004871
GO:GO:0071377 PRINTS:PR00319 HOGENOM:HOG000176356
HOVERGEN:HBG000188 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 EMBL:AF300648 EMBL:AK001890
EMBL:BC000873 IPI:IPI00012451 RefSeq:NP_067642.1 UniGene:Hs.173030
ProteinModelPortal:Q9HAV0 SMR:Q9HAV0 IntAct:Q9HAV0
MINT:MINT-1135986 STRING:Q9HAV0 PhosphoSite:Q9HAV0 DMDM:22256759
OGP:Q9HAV0 PeptideAtlas:Q9HAV0 PRIDE:Q9HAV0 DNASU:59345
Ensembl:ENST00000232564 Ensembl:ENST00000468623 GeneID:59345
KEGG:hsa:59345 UCSC:uc003fjv.4 CTD:59345 GeneCards:GC03M179113
HGNC:HGNC:20731 HPA:CAB018383 HPA:CAB018737 MIM:610863
neXtProt:NX_Q9HAV0 PharmGKB:PA134864200 InParanoid:Q9HAV0 KO:K04538
OMA:GACDATS PhylomeDB:Q9HAV0 GenomeRNAi:59345 NextBio:65246
ArrayExpress:Q9HAV0 Bgee:Q9HAV0 CleanEx:HS_GNB4
Genevestigator:Q9HAV0 GermOnline:ENSG00000114450 Uniprot:Q9HAV0
Length = 340
Score = 163 (62.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 53/168 (31%), Positives = 76/168 (45%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL--RLRGRPTVAFDQQGL 67
F GH V+SL +SP +F+SG+ D S ++WD+R C+ + V+F G
Sbjct: 180 FTGHSGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
FA + +LFD R+ D+ + L D +C I FS G+ +L + N
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ---ELLLYSHDNI-ICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
V D G+ R G L N + T DG V +GS D L WN
Sbjct: 295 NVWDTLKGD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>MGI|MGI:104581 [details] [associations]
symbol:Gnb4 "guanine nucleotide binding protein (G protein),
beta 4" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=ISA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISA] [GO:0006184 "GTP catabolic process" evidence=ISA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0044297 "cell body" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 MGI:MGI:104581
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871 PRINTS:PR00319
GO:GO:0005834 GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:59345
KO:K04538 OMA:GACDATS EMBL:S86124 EMBL:M87286 EMBL:M63658
EMBL:AF277893 EMBL:AF501886 EMBL:AK036816 EMBL:AK152227
EMBL:AK167416 EMBL:BC028753 IPI:IPI00310220 PIR:JS0669
RefSeq:NP_038559.2 UniGene:Mm.139192 ProteinModelPortal:P29387
SMR:P29387 DIP:DIP-604N IntAct:P29387 STRING:P29387
PhosphoSite:P29387 REPRODUCTION-2DPAGE:P29387 PaxDb:P29387
PRIDE:P29387 Ensembl:ENSMUST00000108234 Ensembl:ENSMUST00000155737
GeneID:14696 KEGG:mmu:14696 InParanoid:P29387 NextBio:286647
Bgee:P29387 Genevestigator:P29387 GermOnline:ENSMUSG00000027669
Uniprot:P29387
Length = 340
Score = 163 (62.4 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 54/168 (32%), Positives = 76/168 (45%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL--RLRGRPTVAFDQQGL 67
F GH V+SL +SP +F+SG+ D S ++WD+R C+ + V+F G
Sbjct: 180 FTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGY 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
FA + +LFD R+ D+ + L D +C I FS G+ +L + N
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ---ELLLYSHDNI-ICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
V DA G R G L N + T DG V +GS D L WN
Sbjct: 295 SVWDALKGG-RSGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLRIWN 340
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 163 (62.4 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 56/203 (27%), Positives = 91/203 (44%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA----FD 63
RYFKGHK + S SP + S D + +W L+ +A R G V F
Sbjct: 12 RYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHA--RAYRYVGHKDVVTSLQFS 69
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
QG + A A ++L+ KG F TA V + FS DG+ ++ + + +
Sbjct: 70 PQGNLLASASRDKTVRLWVLDR--KGKSSEFKA--HTAPVRSVDFSADGQFLVTASEDKS 125
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
I V Y +R +SL + A F+PDG+ +VS S D T+ W+ ++ V ++
Sbjct: 126 IKVWSMY--RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFS 183
Query: 184 GNIGVVACLKWAPRRAMFVAASS 206
++G + ++P +A S
Sbjct: 184 DSVGFANFVDFSPNGTCIASAGS 206
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 55/204 (26%), Positives = 84/204 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAF 62
R RY GHK+ V SL SP + S S D +VR+W L + P +V F
Sbjct: 52 RAYRYV-GHKDVVTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDF 110
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
G A E +IK++ S + F + + T V KFS DG+ ++ + +
Sbjct: 111 SADGQFLVTASEDKSIKVW---SMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
I + D K+C + S F+P+G + S D + W+I + +
Sbjct: 167 TIKIWDTTS--KQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHY 224
Query: 183 NGNIGVVACLKWAPRRAMFVAASS 206
+ V CL + P V ASS
Sbjct: 225 QVHSCGVNCLSFHPSGNSLVTASS 248
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 161 (61.7 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 54/215 (25%), Positives = 94/215 (43%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--- 59
D + R+FKGH++ + S+ S SGS+D + +W ++ + R G
Sbjct: 8 DPSLERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQS--RAYRFAGHKDAVT 65
Query: 60 -VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F G + A ++++ KG F TA V + F +DG+S++
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWIPNV--KGESTVFRA--HTATVRSVHFCSDGQSLVTA 121
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + + V + ++ FSL N A F+PDG+ +VS S D T+ W+ +R
Sbjct: 122 SDDKTVKVWSTH--RQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
V + + G V + + P AAS + + W
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVW 214
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 48/199 (24%), Positives = 78/199 (39%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GHK+ V + SP SGS D +VRIW V + R +V F G
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + +K++ + + F F + V +FS DG+ ++ + + + +
Sbjct: 117 SLVTASDDKTVKVWSTH---RQKF-LFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLW 172
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D E C S T F P G + + S D T+ W++ T + + +
Sbjct: 173 DKTSRE--CVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 188 VVACLKWAPRRAMFVAASS 206
V L + P + ASS
Sbjct: 231 AVNALSFHPSGNYLLTASS 249
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 162 (62.1 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 58/210 (27%), Positives = 91/210 (43%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFD 63
RYFKGHK + S+ SP +GS D + +W LR A R G +V F
Sbjct: 12 RYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQA--RAFRYVGHKDVITSVQFS 69
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
G + A A I+L+ +G F TA V + FS DG+ + + + +
Sbjct: 70 PLGNLLASASRDRTIRLWIPDK--RGKSSEFKA--HTAPVRSVDFSADGQFLASASEDKS 125
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
I V + Y +R +SL + A F+PDG+ +VS S D T+ W+ + V ++
Sbjct: 126 IKVWNMY--RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 184 GNIGVVACLKWAPRRAMFVAASS--VLSFW 211
+G + + P +A S + W
Sbjct: 184 DFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
Score = 145 (56.1 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/204 (25%), Positives = 88/204 (43%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIW--DLRVNACQGILRLRGRPTVAF 62
R RY GHK+ + S+ SP+ + S S D ++R+W D R + + +V F
Sbjct: 52 RAFRYV-GHKDVITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDF 110
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
G A A E +IK+++ Y + F + + T V KFS DG+ ++ + +
Sbjct: 111 SADGQFLASASEDKSIKVWNM--Y-RQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
I + D K+C + F P+G + S D T+ W+I + +
Sbjct: 167 TIKIWDTTN--KQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 183 NGNIGVVACLKWAPRRAMFVAASS 206
+ G V C+ + P + ASS
Sbjct: 225 QVHSGGVNCVSFHPSGNYLITASS 248
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 165 (63.1 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 59/213 (27%), Positives = 94/213 (44%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR-LRGRP----TV 60
+L+ GH V SL SP SGS D+++ +WD +A +L+ G P +V
Sbjct: 784 LLQTLDGHSGTVESLAFSPDGKLLASGSYDNTIDLWD---SATGELLQTFEGHPHSIWSV 840
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
AF G A A + IK++D + G L + V + FS DGK + ++
Sbjct: 841 AFAPDGKELASASDDSTIKIWDLAT---GELQQTL-DSHSQSVRSVAFSPDGKLLASSSL 896
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
++ I V + GE + SLE F+PDG+ + SGS T+ WN T +
Sbjct: 897 DSTIKVWNPATGELQQ--SLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQ 954
Query: 181 CWNGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
G+ V + ++P ++SS + W
Sbjct: 955 TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLW 987
Score = 163 (62.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 52/210 (24%), Positives = 91/210 (43%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFD 63
+L+ F+GH + S+ +P S S D +++IWDL Q L + +VAF
Sbjct: 826 LLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFS 885
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
G + A + IK+++ + G L G + V + FS DGK + + N
Sbjct: 886 PDGKLLASSSLDSTIKVWNPAT---GELQQSLEGR-SGWVKSVAFSPDGKKLASGSEKNT 941
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
+ + + GE +LE + F+PDG+ + S S D T+ WN T +
Sbjct: 942 VKLWNPATGELLQ--TLEGHSQSVRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFK 999
Query: 184 GNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
G+ + + ++P V+ S + + W
Sbjct: 1000 GHDLWIRAVAFSPDGKHLVSGSDDNTIKLW 1029
Score = 156 (60.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 53/208 (25%), Positives = 88/208 (42%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGL 67
FKGH + ++ SP +SGS D+++++WDL + Q L R VAF
Sbjct: 998 FKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDK 1057
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + IKL+DS + G L G V + FS DGK + + + I +
Sbjct: 1058 QLASSSLDSTIKLWDSAT---GELQRTLEGHSQG-VRSVTFSPDGKLLASNSYDGTIKLW 1113
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+ GE + +L + F+PDG+ + SG D T+ W+ T + G+
Sbjct: 1114 NPLTGELQQ--TLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSD 1171
Query: 188 VVACLKWAPRRAMFVAAS--SVLSFWIP 213
+ + ++P + + S W P
Sbjct: 1172 RIQSVVFSPDGKLLASGSYDQTAKLWDP 1199
Score = 155 (59.6 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 53/205 (25%), Positives = 88/205 (42%)
Query: 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGRPTVAFDQQGLVFA 70
H V ++ SP + S SLD ++++WD Q L +G +V F G + A
Sbjct: 1043 HSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLA 1102
Query: 71 VAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAY 130
G IKL++ + G L G V + FS DGK + ++ I + D+
Sbjct: 1103 SNSYDGTIKLWNPLT---GELQQTLTGRSDW-VDSVAFSPDGKQLASGYYDSTIKLWDSA 1158
Query: 131 GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVA 190
GE +LE + F+PDG+ + SGS D T W+ T + + G+ V
Sbjct: 1159 TGELLQ--TLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPATGELLQIFEGHSKWVE 1216
Query: 191 CLKWAPRRAMFVAAS--SVLSFWIP 213
+ ++P + ++S + W P
Sbjct: 1217 SVAFSPDGKLLASSSYGETIKLWDP 1241
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 53/207 (25%), Positives = 87/207 (42%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC-QGILRLRGR-PTVAFDQQGLV 68
+ H V S+ SP +SGS D +V+IWD Q + G ++AF G +
Sbjct: 747 ENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKL 806
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
A I L+DS + + TF G + + F+ DGK + + ++ I + D
Sbjct: 807 LASGSYDNTIDLWDSATGEL--LQTF--EGHPHSIWSVAFAPDGKELASASDDSTIKIWD 862
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGV 188
GE + +L+ + F+PDG+ + S S D T+ WN T G G
Sbjct: 863 LATGELQQ--TLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW 920
Query: 189 VACLKWAPRRAMFVAAS--SVLSFWIP 213
V + ++P + S + + W P
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNP 947
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00081
Identities = 44/167 (26%), Positives = 69/167 (41%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQ 65
R +GH + V S+ SP S S D ++++W+ Q L R +VAF
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPD 1139
Query: 66 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
G A IKL+DS + + T + G + + + FS DGK + + +
Sbjct: 1140 GKQLASGYYDSTIKLWDSATGEL--LQT--LEGHSDRIQSVVFSPDGKLLASGSYDQTAK 1195
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ D GE F E F+PDG+ + S S T+ W+
Sbjct: 1196 LWDPATGELLQIF--EGHSKWVESVAFSPDGKLLASSSYGETIKLWD 1240
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 153 (58.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 48/165 (29%), Positives = 71/165 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 80 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 139
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
FA + +LFD R+ D+ T+ + + FS G+ +L + N V
Sbjct: 140 AFATGSDDATCRLFDLRA-DQ-ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 197
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
DA + R G L N + T DG V +GS D L WN
Sbjct: 198 DALKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 240
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 159 (61.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 56/207 (27%), Positives = 96/207 (46%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--V 60
DNR+ GH +V+S N +SGS D ++++WDLR C G +
Sbjct: 397 DNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCNIKTVFAGSSCNDI 456
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
+Q V + + I+ +D R+ + + L+G TA D+ N ++ LLT +
Sbjct: 457 VCTEQ-CVMSGHFDK-KIRFWDIRT-ESIVKELELLGRITA--LDL---NSERTELLTCS 508
Query: 121 NNNIY-VLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-R 176
+++ ++D G + FS + + T F+PDG YV +GS DG L+ WN+ T +
Sbjct: 509 RDDLLKIIDLRVGAVKQTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGK 568
Query: 177 NEVACWNGNIGVVACLKWAPRRAMFVA 203
E + + + W+P A V+
Sbjct: 569 LERTLAKHHSSPINAVAWSPAGAHVVS 595
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 156 (60.0 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 54/215 (25%), Positives = 93/215 (43%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--- 59
D + R+FKGH++ V + S SGS+D ++ IW ++ + R G
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS--RAYRFTGHKDAVT 65
Query: 60 -VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F G + A ++++ KG F TA V + F +DG+S++
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNV--KGESTVFRA--HTATVRSVHFCSDGQSLVTA 121
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + + V + +R FSL N A F+PDG+ +VS S D T+ W+ +R
Sbjct: 122 SDDKTVKVWSTH--RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
+ + + G V + + P AA + + W
Sbjct: 180 IHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 119 (46.9 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 48/199 (24%), Positives = 76/199 (38%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GHK+ V + SP SGS D +VRIW V + R +V F G
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + +K++ + + F F + V KFS DG+ ++ + + + +
Sbjct: 117 SLVTASDDKTVKVWSTH---RQRF-LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D E C S T F P G + + D T+ W+ T + + +
Sbjct: 173 DKTSRE--CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSA 230
Query: 188 VVACLKWAPRRAMFVAASS 206
V L + P + ASS
Sbjct: 231 AVNALSFHPSGNYLITASS 249
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 155 (59.6 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 54/215 (25%), Positives = 91/215 (42%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--- 59
D + R+FKGH++ V S+ S SGS+D + +W ++ R G
Sbjct: 8 DPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQT--RAYRFAGHKDAVT 65
Query: 60 -VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F G + A ++++ KG F TA V + F +DG+S +
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNV--KGESTVFRA--HTATVRSVHFCSDGQSFVTA 121
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + + V + ++ FSL N A F+PDG+ +VS S D T+ W+ +R
Sbjct: 122 SDDKTVKVWSTH--RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
V + + G V + + P AA + + W
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 134 (52.2 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 50/199 (25%), Positives = 78/199 (39%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GHK+ V + SP SGS D +VRIW V + R +V F G
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
F A + +K++ + + F F + V KFS DG+ ++ + + + +
Sbjct: 117 SFVTASDDKTVKVWSTH---RQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D E C S T F P G + + D T+ W++ T + + +
Sbjct: 173 DKTSRE--CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 188 VVACLKWAPRRAMFVAASS 206
V L + P V ASS
Sbjct: 231 AVNALSFHPSGNYLVTASS 249
>UNIPROTKB|Q8N0X2 [details] [associations]
symbol:SPAG16 "Sperm-associated antigen 16 protein"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086 EMBL:AF310672
EMBL:AF426740 EMBL:AF490390 EMBL:AK026377 EMBL:AK095036
EMBL:CR457359 EMBL:CR749477 EMBL:AL832962 EMBL:BC009614
EMBL:BC067756 EMBL:BC100282 IPI:IPI00166103 IPI:IPI00396021
IPI:IPI00470876 IPI:IPI00556122 IPI:IPI00556405
RefSeq:NP_001020607.1 RefSeq:NP_078808.3 UniGene:Hs.602792
ProteinModelPortal:Q8N0X2 SMR:Q8N0X2 IntAct:Q8N0X2 STRING:Q8N0X2
PhosphoSite:Q8N0X2 DMDM:146329993 PRIDE:Q8N0X2
Ensembl:ENST00000272898 Ensembl:ENST00000331683
Ensembl:ENST00000413312 Ensembl:ENST00000432529 GeneID:79582
KEGG:hsa:79582 UCSC:uc002veo.3 UCSC:uc002veq.3 UCSC:uc002ves.1
UCSC:uc010fuz.2 CTD:79582 GeneCards:GC02P214149 H-InvDB:HIX0021055
HGNC:HGNC:23225 HPA:HPA037542 MIM:612173 neXtProt:NX_Q8N0X2
PharmGKB:PA134887898 HOVERGEN:HBG086482 InParanoid:Q8N0X2
OMA:EGHNHAV OrthoDB:EOG41ZF9F PhylomeDB:Q8N0X2 GenomeRNAi:79582
NextBio:68570 ArrayExpress:Q8N0X2 Bgee:Q8N0X2 CleanEx:HS_SPAG16
Genevestigator:Q8N0X2 GermOnline:ENSG00000144451 Uniprot:Q8N0X2
Length = 631
Score = 157 (60.3 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 43/163 (26%), Positives = 73/163 (44%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL--RLRGRPTVAFDQQGLVF 69
GH + V S+ P +++ ++ S D ++ IWD R C+ L + FD +G +
Sbjct: 476 GHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMI 535
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
A G KL+D R P + +G ++ F + G+ + + N I++LD
Sbjct: 536 ASCDACGVTKLWDFRKLL--PIVSIDIGPSPGN--EVNFDSSGRVLAQASGNGVIHLLDL 591
Query: 130 YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
GE E +T F+ DG+ + SG DGT+ W+
Sbjct: 592 KSGEIHKLMGHENEAHT---VVFSHDGEILFSGGSDGTVRTWS 631
>UNIPROTKB|P62871 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9913 "Bos taurus"
[GO:0071380 "cellular response to prostaglandin E stimulus"
evidence=IDA] [GO:0071870 "cellular response to catecholamine
stimulus" evidence=IDA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IDA] [GO:0005622 "intracellular" evidence=IDA]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 EMBL:X03073
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0060041
GO:GO:0007200 GO:GO:0007191 GO:GO:0071870 GO:GO:0071380 PDB:1OMW
PDB:2BCJ PDB:3PSC PDB:3PVU PDB:3PVW PDB:3UZS PDBsum:1OMW
PDBsum:2BCJ PDBsum:3PSC PDBsum:3PVU PDBsum:3PVW PDBsum:3UZS
PDB:3CIK PDB:3KRW PDB:3KRX PDB:3V5W PDBsum:3CIK PDBsum:3KRW
PDBsum:3KRX PDBsum:3V5W GO:GO:0001750 PRINTS:PR00319 GO:GO:0050909
GO:GO:0005834 EMBL:M13236 EMBL:BC105260 IPI:IPI00703160 PIR:A24225
RefSeq:NP_786971.2 UniGene:Bt.57702 PDB:1A0R PDB:1B9X PDB:1B9Y
PDB:1GG2 PDB:1GOT PDB:1GP2 PDB:1TBG PDB:1XHM PDB:2TRC PDB:3AH8
PDBsum:1A0R PDBsum:1B9X PDBsum:1B9Y PDBsum:1GG2 PDBsum:1GOT
PDBsum:1GP2 PDBsum:1TBG PDBsum:1XHM PDBsum:2TRC PDBsum:3AH8
ProteinModelPortal:P62871 SMR:P62871 DIP:DIP-29227N IntAct:P62871
MINT:MINT-1864875 STRING:P62871 PRIDE:P62871
Ensembl:ENSBTAT00000000259 Ensembl:ENSBTAT00000045065 GeneID:281201
KEGG:bta:281201 CTD:2782 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InParanoid:P62871 KO:K04536
OMA:CMLWDIE OrthoDB:EOG4HX51D EvolutionaryTrace:P62871
NextBio:20805257 ArrayExpress:P62871 InterPro:IPR016346
PIRSF:PIRSF002394 Uniprot:P62871
Length = 340
Score = 153 (58.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 48/165 (29%), Positives = 71/165 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
FA + +LFD R+ D+ T+ + + FS G+ +L + N V
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ-ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
DA + R G L N + T DG V +GS D L WN
Sbjct: 298 DALKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62872 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9615 "Canis lupus
familiaris" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IEA]
[GO:0050909 "sensory perception of taste" evidence=IEA] [GO:0008283
"cell proliferation" evidence=IEA] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0001750 "photoreceptor outer segment" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0004871 GO:GO:0060041 GO:GO:0007200 GO:GO:0001750
PRINTS:PR00319 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:Z75134
RefSeq:NP_001003236.1 UniGene:Cfa.3773 ProteinModelPortal:P62872
SMR:P62872 STRING:P62872 PRIDE:P62872 Ensembl:ENSCAFT00000030502
Ensembl:ENSCAFT00000035727 GeneID:403912 KEGG:cfa:403912
InParanoid:P62872 NextBio:20817404 Uniprot:P62872
Length = 340
Score = 153 (58.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 48/165 (29%), Positives = 71/165 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
FA + +LFD R+ D+ T+ + + FS G+ +L + N V
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ-ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
DA + R G L N + T DG V +GS D L WN
Sbjct: 298 DALKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P62873 [details] [associations]
symbol:GNB1 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0001917
"photoreceptor inner segment" evidence=IEA] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IEA] [GO:0044297
"cell body" evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0007213
"G-protein coupled acetylcholine receptor signaling pathway"
evidence=TAS] [GO:0007265 "Ras protein signal transduction"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0006112 "energy
reserve metabolic process" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007596 "blood coagulation"
evidence=TAS] [GO:0030168 "platelet activation" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0071377 "cellular response to glucagon stimulus" evidence=TAS]
[GO:0007191 "adenylate cyclase-activating dopamine receptor
signaling pathway" evidence=ISS] [GO:0071380 "cellular response to
prostaglandin E stimulus" evidence=ISS] [GO:0071870 "cellular
response to catecholamine stimulus" evidence=ISS] [GO:0005622
"intracellular" evidence=ISS] [GO:0016020 "membrane" evidence=ISS]
[GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
GO:GO:0007265 GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0007268
GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006112 GO:GO:0004871 EMBL:CH471183 GO:GO:0060041
GO:GO:0007204 GO:GO:0007213 GO:GO:0007200
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0071377
GO:GO:0007191 GO:GO:0071870 GO:GO:0071380
Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:txa2pathway GO:GO:0001750
Pathway_Interaction_DB:rhodopsin_pathway PRINTS:PR00319
EMBL:AL109917 EMBL:AL031282
Pathway_Interaction_DB:wnt_calcium_pathway GO:GO:0050909
GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X04526 EMBL:AF501882 EMBL:BT007305
EMBL:CR456784 EMBL:BC004186 EMBL:BC005888 EMBL:BC008991 EMBL:M36430
IPI:IPI00026268 PIR:A24853 RefSeq:NP_002065.1 UniGene:Hs.430425
ProteinModelPortal:P62873 SMR:P62873 DIP:DIP-599N IntAct:P62873
MINT:MINT-94562 STRING:P62873 PhosphoSite:P62873 DMDM:51317302
OGP:P62873 REPRODUCTION-2DPAGE:IPI00026268 PaxDb:P62873
PRIDE:P62873 DNASU:2782 Ensembl:ENST00000378606
Ensembl:ENST00000378609 GeneID:2782 KEGG:hsa:2782 UCSC:uc001aif.3
GeneCards:GC01M001748 HGNC:HGNC:4396 HPA:HPA040736 MIM:139380
neXtProt:NX_P62873 PharmGKB:PA28776 InParanoid:P62873
PhylomeDB:P62873 ChiTaRS:GNB1 EvolutionaryTrace:P62873
GenomeRNAi:2782 NextBio:10959 ArrayExpress:P62873 Bgee:P62873
CleanEx:HS_GNB1 Genevestigator:P62873 GermOnline:ENSG00000078369
Uniprot:P62873
Length = 340
Score = 153 (58.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 48/165 (29%), Positives = 71/165 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
FA + +LFD R+ D+ T+ + + FS G+ +L + N V
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ-ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
DA + R G L N + T DG V +GS D L WN
Sbjct: 298 DALKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>MGI|MGI:95781 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein),
beta 1" species:10090 "Mus musculus" [GO:0001664 "G-protein coupled
receptor binding" evidence=ISO] [GO:0001750 "photoreceptor outer
segment" evidence=IDA] [GO:0001917 "photoreceptor inner segment"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISO;ISA;IPI]
[GO:0006184 "GTP catabolic process" evidence=ISO;ISA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISO;IDA;TAS] [GO:0007200
"phospholipase C-activating G-protein coupled receptor signaling
pathway" evidence=IDA] [GO:0007204 "elevation of cytosolic calcium
ion concentration" evidence=ISO] [GO:0007603 "phototransduction,
visible light" evidence=ISA] [GO:0008283 "cell proliferation"
evidence=IDA] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031702
"type 1 angiotensin receptor binding" evidence=ISO] [GO:0042622
"photoreceptor outer segment membrane" evidence=ISO] [GO:0044297
"cell body" evidence=ISO] [GO:0050909 "sensory perception of taste"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0071456 "cellular response to hypoxia" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95781 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008283 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456
GO:GO:0007603 GO:GO:0004871 GO:GO:0060041 GO:GO:0007204
GO:GO:0007200 GO:GO:0010659 GO:GO:0001750 PRINTS:PR00319
GO:GO:0050909 GO:GO:0005834 CTD:2782 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D
InterPro:IPR016346 PIRSF:PIRSF002394 ChiTaRS:GNB1 EMBL:U29055
EMBL:AB042854 EMBL:BC013058 IPI:IPI00120716 PIR:JC5057
RefSeq:NP_001153488.1 RefSeq:NP_001153489.1 RefSeq:NP_032168.1
UniGene:Mm.2344 ProteinModelPortal:P62874 SMR:P62874 IntAct:P62874
STRING:P62874 PhosphoSite:P62874 PaxDb:P62874 PRIDE:P62874
Ensembl:ENSMUST00000030940 Ensembl:ENSMUST00000105616
Ensembl:ENSMUST00000165335 Ensembl:ENSMUST00000176637 GeneID:14688
KEGG:mmu:14688 InParanoid:P62874 NextBio:286631 Bgee:P62874
Genevestigator:P62874 Uniprot:P62874
Length = 340
Score = 153 (58.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 48/165 (29%), Positives = 71/165 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
FA + +LFD R+ D+ T+ + + FS G+ +L + N V
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ-ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
DA + R G L N + T DG V +GS D L WN
Sbjct: 298 DALKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>RGD|2718 [details] [associations]
symbol:Gnb1 "guanine nucleotide binding protein (G protein), beta
polypeptide 1" species:10116 "Rattus norvegicus" [GO:0001750
"photoreceptor outer segment" evidence=ISO] [GO:0001917
"photoreceptor inner segment" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISO;IDA;TAS] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISO;IMP;TAS] [GO:0007200 "phospholipase
C-activating G-protein coupled receptor signaling pathway"
evidence=IEA;ISO] [GO:0007204 "elevation of cytosolic calcium ion
concentration" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0010659 "cardiac muscle cell apoptotic process"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0042622
"photoreceptor outer segment membrane" evidence=IDA] [GO:0044297
"cell body" evidence=IDA] [GO:0050909 "sensory perception of taste"
evidence=IEA;ISO] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
[GO:0060041 "retina development in camera-type eye" evidence=IEA;ISO]
[GO:0071456 "cellular response to hypoxia" evidence=IDA] [GO:0001664
"G-protein coupled receptor binding" evidence=IMP] [GO:0031702 "type
1 angiotensin receptor binding" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:2718
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GO:GO:0008283 GO:GO:0030425 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071456 GO:GO:0007186
GO:GO:0004871 GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 PDB:3SN6
PDBsum:3SN6 GO:GO:0001917 GO:GO:0010659 GO:GO:0044297 PRINTS:PR00319
GO:GO:0042622 GO:GO:0050909 GO:GO:0005834 CTD:2782
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 HOVERGEN:HBG000188
KO:K04536 OMA:CMLWDIE OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U34958 EMBL:U88324 EMBL:AY552805 EMBL:BC078809
IPI:IPI00212655 RefSeq:NP_112249.2 UniGene:Rn.126047
ProteinModelPortal:P54311 SMR:P54311 DIP:DIP-37029N IntAct:P54311
MINT:MINT-1795773 STRING:P54311 PhosphoSite:P54311 PRIDE:P54311
Ensembl:ENSRNOT00000041789 GeneID:24400 KEGG:rno:24400
InParanoid:P54311 EvolutionaryTrace:P54311 NextBio:603199
ArrayExpress:P54311 Genevestigator:P54311
GermOnline:ENSRNOG00000016638 Uniprot:P54311
Length = 340
Score = 153 (58.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 48/165 (29%), Positives = 71/165 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
FA + +LFD R+ D+ T+ + + FS G+ +L + N V
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ-ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
DA + R G L N + T DG V +GS D L WN
Sbjct: 298 DALKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 155 (59.6 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 53/192 (27%), Positives = 84/192 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQ--QGL 67
F GH V ++ SP + +SGS D +V +WD+R L P D G
Sbjct: 257 FIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGT 316
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI--- 124
+ A G ++++D+ + G LV D V +KFS +GK +L T ++ +
Sbjct: 317 LIASCATDGLVRIWDTST---GQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLW 373
Query: 125 -YV----LDAYGGEKRCGFSLEPSPNTNTEAT--FTPDGQYVVSGSGDGTLHAWNINTRN 177
YV L Y G +SL + ++ TP + VSGS DG + W++ T+
Sbjct: 374 DYVEGRCLKTYQGHSNKKYSLSGAFGVYGQSIPGRTPGYAFAVSGSEDGAILCWDVVTKK 433
Query: 178 EVACWNGNIGVV 189
+ + GVV
Sbjct: 434 VLQRIEAHDGVV 445
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 154 (59.3 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 55/204 (26%), Positives = 89/204 (43%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIW--DLRVNACQGILRLRGRPTVAF 62
R RY GHK+ V S+ SP+ + S S D +VR+W D R + + +V F
Sbjct: 52 RAFRYV-GHKDVVTSVQFSPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDF 110
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
G A A E +IK+++ Y + F + + T V KFS DG+ ++ + +
Sbjct: 111 SADGQFLATASEDKSIKVWNM--Y-RQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
I + D K+C + S F P+G + S D T+ W+I + +
Sbjct: 167 TIKIWDTTN--KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 183 NGNIGVVACLKWAPRRAMFVAASS 206
+ G V C+ + P + ASS
Sbjct: 225 QVHSGGVNCVSFHPSGNYIITASS 248
Score = 154 (59.3 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 54/210 (25%), Positives = 91/210 (43%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFD 63
RYFKGHK + S+ SP + S D + +W+ + A R G +V F
Sbjct: 12 RYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQA--RAFRYVGHKDVVTSVQFS 69
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
G + A A ++L+ +G F TA V + FS DG+ + + + +
Sbjct: 70 PLGNLLASASRDRTVRLWIPDK--RGKSSEFKA--HTAPVRSVDFSADGQFLATASEDKS 125
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
I V + Y +R +SL + A F+PDG+ +VS S D T+ W+ + V ++
Sbjct: 126 IKVWNMY--RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 184 GNIGVVACLKWAPRRAMFVAASS--VLSFW 211
++G + + P +A S + W
Sbjct: 184 DSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 151 (58.2 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 54/215 (25%), Positives = 92/215 (42%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--- 59
D + R+FKGH++ V + S SGS+D ++ IW ++ + R G
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQS--RAYRFTGHKDAVT 65
Query: 60 -VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F G + A ++++ KG F TA V + F +DG+ ++
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNV--KGESTVFRA--HTATVRSVHFCSDGQLLVTA 121
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + + V + +R FSL N A F+PDG+ +VS S D T+ W+ +R
Sbjct: 122 SDDKTVKVWSTH--RQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 179
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
V + + G V + + P AA + + W
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 126 (49.4 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 49/199 (24%), Positives = 77/199 (38%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GHK+ V + SP SGS D +VRIW V + R +V F G
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ A + +K++ + + F F + V KFS DG+ ++ + + + +
Sbjct: 117 LLVTASDDKTVKVWSTH---RQRF-LFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D E C S T F P G + + D T+ W+ T V + +
Sbjct: 173 DKTSRE--CVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSA 230
Query: 188 VVACLKWAPRRAMFVAASS 206
V L + P + ASS
Sbjct: 231 AVNALSFHPSGNYLITASS 249
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 153 (58.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 51/180 (28%), Positives = 82/180 (45%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV 60
M D + R+FKGHK+ + +P N +GS D S+ IW+L A R G V
Sbjct: 5 MEDPTLERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKA--RAFRFVGHTDV 62
Query: 61 A----FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML 116
F G + A + ++L+ KG F TA V + FS DG+ ++
Sbjct: 63 ITGVNFAPSGSLVASSSRDQTVRLWTPSI--KGESTVFKA--HTASVRSVHFSRDGQRLV 118
Query: 117 LTTTNNNIYVLDAYGGE-KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ + ++ V +G E K+ +SL N A F+PDG+ + S D T+ W+ ++
Sbjct: 119 TASDDKSVKV---WGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSS 175
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 148 (57.2 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 58/214 (27%), Positives = 92/214 (42%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
+GH+ V+S+ +S S SLD +R+WDL + I + P TVAF
Sbjct: 61 EGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETG--KQIKSMDAGPVDAWTVAFSPDS 118
Query: 67 LVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A G + +F S K DT G + I +S DGK + + I
Sbjct: 119 KYIATGSHLGKVNIFGVESGKKEHSLDT---RGKF--ILSIAYSPDGKYLASGAIDGIIN 173
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ D G+ +LE TF+PD Q +V+ S DG + +++ N +G+
Sbjct: 174 IFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 186 IGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNS 219
V + ++P FV++SS S + + SS S
Sbjct: 232 GSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRS 265
Score = 116 (45.9 bits), Expect = 0.00013, P = 0.00013
Identities = 45/190 (23%), Positives = 81/190 (42%)
Query: 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGLVFAVAMEAGAIKLF 81
+++ ++GSLD V++W + L G +V Q G + A + I+L+
Sbjct: 32 SETIVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLW 91
Query: 82 DS------RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR 135
D +S D GP D + V FS D K + + + + G+K
Sbjct: 92 DLETGKQIKSMDAGPVDAWTVA----------FSPDSKYIATGSHLGKVNIFGVESGKKE 141
Query: 136 CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA 195
SL+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++
Sbjct: 142 --HSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 196 PRRAMFVAAS 205
P + V AS
Sbjct: 200 PDSQLLVTAS 209
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 150 (57.9 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 53/215 (24%), Positives = 92/215 (42%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--- 59
D + R+FKGH++ V + S SGS+D + +W ++ + R G
Sbjct: 8 DPSLERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQS--RAYRFTGHKDAVT 65
Query: 60 -VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F G + A ++++ KG F TA V + F +DG+S +
Sbjct: 66 CVNFSPSGHLLASGSRDKTVRIWVPNV--KGESTVFRA--HTATVRSVHFCSDGQSFVTA 121
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + + V + ++ FSL N A F+PDG+ +VS S D T+ W+ ++R
Sbjct: 122 SDDKTVKVWATH--RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSREC 179
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
V + + G V + + P AA + + W
Sbjct: 180 VHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVW 214
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 48/199 (24%), Positives = 78/199 (39%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GHK+ V + SP SGS D +VRIW V + R +V F G
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 116
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
F A + +K++ + + F F + V KFS DG+ ++ + + + +
Sbjct: 117 SFVTASDDKTVKVWATH---RQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 172
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D + C S T F P G + + D T+ W++ T + + +
Sbjct: 173 DK--SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 230
Query: 188 VVACLKWAPRRAMFVAASS 206
V L + P + ASS
Sbjct: 231 AVNGLSFHPSGNYLITASS 249
>ZFIN|ZDB-GENE-050417-401 [details] [associations]
symbol:atg16l1 "ATG16 autophagy related 16-like 1
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050417-401 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
EMBL:CABZ01067234 EMBL:CABZ01067235 EMBL:CABZ01067236
EMBL:CABZ01067237 EMBL:CABZ01067238 EMBL:CU672237 IPI:IPI00995960
ProteinModelPortal:F1QGM8 Ensembl:ENSDART00000122085 Bgee:F1QGM8
Uniprot:F1QGM8
Length = 605
Score = 152 (58.6 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 51/207 (24%), Positives = 90/207 (43%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--V 60
D R+ GH +V+S N +SGS D ++++WDLR C G +
Sbjct: 392 DYRLRHTLTGHSGKVLSARFLLDNARIVSGSYDRTLKLWDLRSKVCSMKTVFAGSSCNDI 451
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
+Q V + + ++ +D SY L V + ++D +L +
Sbjct: 452 VCTEQ-CVMSGHFDK-KVRFWDI-SYQNYHIQKQL--NKLCRVTSLDLNHDRTELLTCSR 506
Query: 121 NNNIYVLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-RN 177
++ + ++D R F+ + + T TF+PDG +V +GS DG L+ WN+ T +
Sbjct: 507 DDLVKIIDLRTNAVRQTFNAQGFKCGSDFTRVTFSPDGSFVAAGSADGVLYLWNVLTGKL 566
Query: 178 EVACWNGNIGVVACLKWAPRRAMFVAA 204
E G+ + + W+ A FVA+
Sbjct: 567 EKTLDKGHSSAINSVSWSLSGA-FVAS 592
>TAIR|locus:2139489 [details] [associations]
symbol:AGB1 "AT4G34460" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0005834
"heterotrimeric G-protein complex" evidence=ISS;IDA;IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003924 "GTPase
activity" evidence=ISS] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0010154 "fruit development" evidence=IMP]
[GO:0072593 "reactive oxygen species metabolic process"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=RCA;IMP] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA;IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0009845
"seed germination" evidence=IEP;IMP] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0009723 "response to ethylene stimulus"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IMP] [GO:0048527 "lateral root development"
evidence=RCA;IMP] [GO:0009991 "response to extracellular stimulus"
evidence=IMP] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0006612 "protein targeting to membrane" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009617 "response to
bacterium" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009738 "abscisic acid mediated
signaling pathway" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0048193 "Golgi vesicle transport" evidence=RCA] [GO:0051707
"response to other organism" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005783
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009738 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 GO:GO:0048527 GO:GO:0009817
GO:GO:0009845 GO:GO:0009887 GO:GO:0009788 GO:GO:0004871
GO:GO:0009991 GO:GO:0072593 GO:GO:0010154 EMBL:AL161585
GO:GO:0030968 EMBL:AL023094 GO:GO:0009867 PRINTS:PR00319
GO:GO:0080008 GO:GO:0005834 HOGENOM:HOG000176356 KO:K04536
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:GACDATS EMBL:U12232
IPI:IPI00545688 PIR:T05266 RefSeq:NP_195172.1 UniGene:At.22855
ProteinModelPortal:P49177 SMR:P49177 DIP:DIP-40108N IntAct:P49177
STRING:P49177 PaxDb:P49177 PRIDE:P49177 EnsemblPlants:AT4G34460.1
GeneID:829597 KEGG:ath:AT4G34460 GeneFarm:2858 TAIR:At4g34460
InParanoid:P49177 PhylomeDB:P49177 ProtClustDB:CLSN2685906
Genevestigator:P49177 Uniprot:P49177
Length = 377
Score = 149 (57.5 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 48/168 (28%), Positives = 72/168 (42%)
Query: 12 GHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
GH V+S+ +S N + F+SGS D + R+WD R A + + G TV F G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRA-ASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT-TTNNNIY 125
F + G +L+D R+ + G+ V I FS G+ + +NN Y
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSGRLLFAGYASNNTCY 320
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATF--TPDGQYVVSGSGDGTLHAW 171
V D GE L+ + N + + DG + +GS D L W
Sbjct: 321 VWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWDSNLKIW 368
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 148 (57.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 50/168 (29%), Positives = 73/168 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
FA + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ---ELMVYSHDNI-ICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
V DA + R G L N + T DG V +GS D L WN
Sbjct: 295 NVWDALKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 148 (57.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 54/215 (25%), Positives = 91/215 (42%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--- 59
D + R+FKGH++ V + S SGS+D + +W ++ + R G
Sbjct: 39 DPSLERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQS--RAYRFTGHKDAVT 96
Query: 60 -VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
V F G + A ++++ KG F TA V + F +DG+S +
Sbjct: 97 CVNFSPSGHLLASGSRDKTVRIWVPNI--KGESTVFRA--HTATVRSVHFCSDGQSFVTA 152
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ + I V + ++ FSL N A F+PDG+ +VS S D T+ W+ +R
Sbjct: 153 SDDKTIKVWSTH--RQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSREC 210
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
V + + G V + + P AA + + W
Sbjct: 211 VHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVW 245
Score = 135 (52.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 51/199 (25%), Positives = 78/199 (39%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GHK+ V + SP SGS D +VRIW + + R +V F G
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQ 147
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
F A + IK++ + + F F + V KFS DG+ ++ + + + +
Sbjct: 148 SFVTASDDKTIKVWSTH---RQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 203
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D E C S T F P G V + D T+ W++ T + + +
Sbjct: 204 DKTSRE--CVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSA 261
Query: 188 VVACLKWAPRRAMFVAASS 206
V L + P V ASS
Sbjct: 262 AVNALSFHPSGNYLVTASS 280
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 147 (56.8 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 50/168 (29%), Positives = 72/168 (42%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL +SP +F+SG+ D S ++WD+R C+ VAF G
Sbjct: 180 FTGHTGDVMSLSLSPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPF---DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
FA + +LFD R+ + D + G + + FS G+ + + N
Sbjct: 240 AFATGSDDATCRLFDIRADQELAMYSHDNIICG-----ITSVAFSKSGRLLFAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
V D+ E R G L N + T DG V +GS D L WN
Sbjct: 295 NVWDSMRQE-RAGV-LAGHDNRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 146 (56.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 51/206 (24%), Positives = 91/206 (44%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR--VNACQGILRLRGRPTV 60
D + R+F+GH++ + S+ S SGS+D ++IW ++ + A + V
Sbjct: 9 DPSLERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCV 68
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
F G + A + L+ KG F TA V + FS+DG+S++ +
Sbjct: 69 QFSPSGHLVASGSRDKTVCLWVPSV--KGESTVFKA--HTATVRSVHFSSDGQSLVTASD 124
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
+ I V + ++ FSL N A F+PDG+ + S S D T+ W+ +R +
Sbjct: 125 DKTIKVWTVH--RQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIH 182
Query: 181 CWNGNIGVVACLKWAPRRAMFVAASS 206
+ + G +++ P AA +
Sbjct: 183 SFCEHGGFANHVEFHPSGTCIAAAGT 208
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 145 (56.1 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 49/168 (29%), Positives = 72/168 (42%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V+SL ++P F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGN 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
FA + +LFD R+ D+ + + D +C I FS G+ +L + N
Sbjct: 240 AFATGSDDATCRLFDLRA-DQ---ELMVYSHDNI-ICGITSVAFSKSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
V D + R G L N + T DG V +GS D L WN
Sbjct: 295 NVWDTLKAD-RAGV-LAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 150 (57.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 51/217 (23%), Positives = 98/217 (45%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD--- 63
++ ++ HKE + + SP + F+SGS D ++RIWD + +LR G
Sbjct: 222 VKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGADVKCVHWHP 281
Query: 64 QQGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
Q+G++ + + + IK++D +S G + + V D+K+ ND + L+T + +
Sbjct: 282 QKGMIVSGSKDNQQPIKIWDPKS---G-IALATLHAHKSTVMDLKW-NDNGNWLVTASRD 336
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTP--DGQYVVSGSGDGTLHAWNINTRNEVA 180
++ L + + ++ P +G + SG DG++ WN+ T E+
Sbjct: 337 HLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEGLFC-SGGSDGSILFWNVGTDKEIG 395
Query: 181 CWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN 214
C + +V L W P + + S+ + FW N
Sbjct: 396 CVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRN 432
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 147 (56.8 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 55/210 (26%), Positives = 90/210 (42%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA----FD 63
R FKGHK + S SP + S D + +W L+ +A R G V F
Sbjct: 12 RSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHA--RAYRYVGHKDVVTSLQFS 69
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
QG + A A ++L+ KG F TA V + FS DG+ ++ + + +
Sbjct: 70 PQGNLLASASRDRTVRLWVLDR--KGKSSEFKA--HTAPVRSVDFSADGQLLVTASEDKS 125
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
I V + +R +SL + A F+PDG+ +VS S D T+ W+ + V ++
Sbjct: 126 IKVWSMF--RQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFS 183
Query: 184 GNIGVVACLKWAPRRAMFVAASS--VLSFW 211
++G + + P +A S + W
Sbjct: 184 DSVGFANFVDFNPNGTCIASAGSDHAVKIW 213
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 55/204 (26%), Positives = 84/204 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAF 62
R RY GHK+ V SL SP + S S D +VR+W L + P +V F
Sbjct: 52 RAYRYV-GHKDVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDF 110
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
G + A E +IK++ S + F + + T V KFS DG+ ++ + +
Sbjct: 111 SADGQLLVTASEDKSIKVW---SMFRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 166
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
I + D K+C + S F P+G + S D + W+I + +
Sbjct: 167 TIKIWDTTN--KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHY 224
Query: 183 NGNIGVVACLKWAPRRAMFVAASS 206
+ V CL + P V ASS
Sbjct: 225 QVHSCGVNCLSFHPLGNSLVTASS 248
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 143 (55.4 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 58/211 (27%), Positives = 92/211 (43%)
Query: 3 DNRI-LRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-- 58
D R+ L++ +GH+ V+S+ +S S SLD +R+WDL N Q I + P
Sbjct: 51 DERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQ-IKSIDAGPVD 108
Query: 59 --TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSM 115
T+AF A G + +F S K DT G + I +S DGK +
Sbjct: 109 AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT---RGKF--ILSIAYSPDGKYL 163
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ I + D G+ +LE TF+PD Q +V+ S DG + +++
Sbjct: 164 ASGAIDGIINIFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
N +G+ V + + P FV++SS
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 252
Score = 114 (45.2 bits), Expect = 0.00020, P = 0.00020
Identities = 46/190 (24%), Positives = 82/190 (43%)
Query: 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFD-QQGLVFAVAMEAGA-IKLF 81
+++ ++GSLD V++W R L G V+ D L A + A I+L+
Sbjct: 32 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 82 DS------RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR 135
D +S D GP D + + FS D + + T + + G+K
Sbjct: 92 DLENGKQIKSIDAGPVDAWTLA----------FSPDSQYLATGTHVGKVNIFGVESGKKE 141
Query: 136 CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA 195
+SL+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++
Sbjct: 142 --YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 196 PRRAMFVAAS 205
P + V AS
Sbjct: 200 PDSQLLVTAS 209
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 146 (56.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 54/204 (26%), Positives = 85/204 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIW--DLRVNACQGILRLRGRPTVAF 62
R RY GHK+ V S+ SP + S S D +VR+W D R + +V F
Sbjct: 10 RAYRYV-GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDF 68
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
G A A E +IK++ S + F + + T V KFS DG+ ++ + +
Sbjct: 69 SADGQFLATASEDKSIKVW---SMYRQRF-LYSLYRHTHWVRCAKFSPDGRLIVSCSEDK 124
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
I + D K+C + S F P G + S D T+ W++ + +
Sbjct: 125 TIKIWDTTN--KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 182
Query: 183 NGNIGVVACLKWAPRRAMFVAASS 206
+ G V C+ + P + ASS
Sbjct: 183 QVHSGGVNCISFHPSGNYLITASS 206
>FB|FBgn0001105 [details] [associations]
symbol:Gbeta13F "G protein beta-subunit 13F" species:7227
"Drosophila melanogaster" [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS;NAS] [GO:0003924 "GTPase activity"
evidence=ISS;NAS] [GO:0007186 "G-protein coupled receptor signaling
pathway" evidence=ISS;NAS] [GO:0055059 "asymmetric neuroblast
division" evidence=IMP] [GO:0007015 "actin filament organization"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=TAS] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005886 GO:GO:0005875 GO:GO:0007015
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 ChiTaRS:Gbeta13F EMBL:AE014298 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 GO:GO:0045176
PRINTS:PR00319 GO:GO:0055059 GeneTree:ENSGT00550000074331 KO:K04536
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:M22567
EMBL:AY058566 PIR:A40489 RefSeq:NP_525090.1 RefSeq:NP_727907.1
RefSeq:NP_996459.1 RefSeq:NP_996460.1 RefSeq:NP_996461.1
RefSeq:NP_996462.1 UniGene:Dm.7041 ProteinModelPortal:P26308
SMR:P26308 DIP:DIP-18432N MINT:MINT-1016369 STRING:P26308
PaxDb:P26308 PRIDE:P26308 EnsemblMetazoa:FBtr0074106
EnsemblMetazoa:FBtr0074107 EnsemblMetazoa:FBtr0074108
EnsemblMetazoa:FBtr0074110 EnsemblMetazoa:FBtr0074111
EnsemblMetazoa:FBtr0331597 GeneID:32544 KEGG:dme:Dmel_CG10545
CTD:32544 FlyBase:FBgn0001105 InParanoid:P26308 OrthoDB:EOG4NS1T0
PhylomeDB:P26308 GenomeRNAi:32544 NextBio:779043 Bgee:P26308
GermOnline:CG10545 Uniprot:P26308
Length = 340
Score = 144 (55.7 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 47/168 (27%), Positives = 71/168 (42%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH V++L ++P +F+SG+ D S ++WD+R C+ V F G
Sbjct: 180 FLGHTGDVMALSLAPQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQ 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPF---DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
FA + +LFD R+ + D + G + + FS G+ +L + N
Sbjct: 240 AFATGSDDATCRLFDIRADQELAMYSHDNIICG-----ITSVAFSKSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
V D E R G L N + T +G V +GS D L WN
Sbjct: 295 NVWDTMKAE-RSGI-LAGHDNRVSCLGVTENGMAVATGSWDSFLRVWN 340
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 143 (55.4 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 58/211 (27%), Positives = 92/211 (43%)
Query: 3 DNRI-LRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-- 58
D R+ L++ +GH+ V+S+ +S S SLD +R+WDL N Q I + P
Sbjct: 51 DERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQ-IKSIDAGPVD 108
Query: 59 --TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSM 115
T+AF A G + +F S K DT G + I +S DGK +
Sbjct: 109 AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT---RGKF--ILSIAYSPDGKYL 163
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ I + D G+ +LE TF+PD Q +V+ S DG + +++
Sbjct: 164 ASGAIDGIINIFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
N +G+ V + + P FV++SS
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 252
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 46/190 (24%), Positives = 82/190 (43%)
Query: 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFD-QQGLVFAVAMEAGA-IKLF 81
+++ ++GSLD V++W R L G V+ D L A + A I+L+
Sbjct: 32 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 82 DS------RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR 135
D +S D GP D + + FS D + + T + + G+K
Sbjct: 92 DLENGKQIKSIDAGPVDAWTLA----------FSPDSQYLATGTHVGKVNIFGVESGKKE 141
Query: 136 CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA 195
+SL+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++
Sbjct: 142 --YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 196 PRRAMFVAAS 205
P + V AS
Sbjct: 200 PDSQLLVTAS 209
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 145 (56.1 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL--RLRGRPTVAFDQQ-GL 67
+GH +ISL + D ++GS DH+V +WD IL + +F+ L
Sbjct: 216 RGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSL 275
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ +M+ KL+D+ + G L G D E+ D F GK + + + +
Sbjct: 276 ILTGSMDK-TCKLWDATN---GKCVATLTGHDD-EILDSCFDYTGKLIATASADGTARIF 330
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
A ++C LE ++ +F P G ++++GS D T W+ T
Sbjct: 331 SA--ATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQT 376
Score = 139 (54.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 45/201 (22%), Positives = 92/201 (45%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQ 65
F+GH ++ L +P + +GS+D + ++WD++ N + + LRG +++F+
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQ-NG-EEVYTLRGHSAEIISLSFNTS 230
Query: 66 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
G + ++D+ D G L+G AE+ F+ D +L + +
Sbjct: 231 GDRIITGSFDHTVVVWDA---DTGRKVNILIG-HCAEISSASFNWDCSLILTGSMDKTCK 286
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ DA G +C +L + ++ F G+ + + S DGT ++ TR +A G+
Sbjct: 287 LWDATNG--KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGH 344
Query: 186 IGVVACLKWAPRRAMFVAASS 206
G ++ + + P+ + SS
Sbjct: 345 EGEISKISFNPQGNHLLTGSS 365
Score = 131 (51.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 40/182 (21%), Positives = 79/182 (43%)
Query: 7 LRYFKGHKERVISLCMS-PVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV--AFD 63
L +GH+ V ++ + P D +GS D + ++W + C R V +F+
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
Q + A KL+D ++ + + + + G +AE+ + F+ G ++ + ++
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQNGE----EVYTLRGHSAEIISLSFNTSGDRIITGSFDHT 242
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
+ V DA G K + ++ A+F D +++GS D T W+ VA
Sbjct: 243 VVVWDADTGRK-VNILIGHCAEISS-ASFNWDCSLILTGSMDKTCKLWDATNGKCVATLT 300
Query: 184 GN 185
G+
Sbjct: 301 GH 302
>SGD|S000000680 [details] [associations]
symbol:TUP1 "General repressor of transcription" species:4932
"Saccharomyces cerevisiae" [GO:0001191 "RNA polymerase II
transcription factor binding transcription factor activity involved
in negative regulation of transcription" evidence=IMP;IDA;IPI]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0001198 "negative regulation of mating-type specific
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000433 "negative regulation of transcription from RNA
polymerase II promoter by glucose" evidence=IMP] [GO:2000531
"regulation of fatty acid biosynthetic process by regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0036033 "mediator
complex binding" evidence=IDA;IPI] [GO:0042826 "histone deacetylase
binding" evidence=IDA;IPI] [GO:0043486 "histone exchange"
evidence=IMP] [GO:0061418 "regulation of transcription from RNA
polymerase II promoter in response to hypoxia" evidence=IMP]
[GO:0061392 "regulation of transcription from RNA polymerase II
promoter in response to osmotic stress" evidence=IMP] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA;IPI] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA;IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0035955 "negative regulation of dipeptide transport by negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IMP] [GO:0016584 "nucleosome positioning"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000680 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GO:GO:2001020 GO:GO:0043486 GO:GO:0042393 GO:GO:0042826
GO:GO:0061418 GO:GO:0016584 GO:GO:0043130 GO:GO:0080025
GO:GO:0001191 GO:GO:0035955 GO:GO:0000433 GO:GO:0007070
GO:GO:2000531 GO:GO:0061392 GeneTree:ENSGT00700000104507
GO:GO:0001198 GO:GO:0036033 HOGENOM:HOG000200558 KO:K06666
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:M31733 EMBL:M35861 EMBL:X16365 PIR:JN0133 RefSeq:NP_010007.1
PDB:1ERJ PDB:3VP8 PDB:3VP9 PDBsum:1ERJ PDBsum:3VP8 PDBsum:3VP9
ProteinModelPortal:P16649 SMR:P16649 DIP:DIP-512N IntAct:P16649
MINT:MINT-648551 STRING:P16649 PaxDb:P16649 PeptideAtlas:P16649
EnsemblFungi:YCR084C GeneID:850445 KEGG:sce:YCR084C CYGD:YCR084c
OMA:TISESCI EvolutionaryTrace:P16649 NextBio:966057
Genevestigator:P16649 GermOnline:YCR084C Uniprot:P16649
Length = 713
Score = 147 (56.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 52/202 (25%), Positives = 93/202 (46%)
Query: 3 DNR-ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTV 60
+NR I+ +GH++ + SL P D +SGS D +VRIWDLR C L + G TV
Sbjct: 473 ENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTV 532
Query: 61 AFDQ-QGLVFAVAMEAGAIKLFDSRS---YDKGPFDTFLVGGDTAEVCDIKFSNDGKSML 116
A G A A++++DS + ++ + G V + F+ DG+S++
Sbjct: 533 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 592
Query: 117 LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNT-EATF------------TPDGQYVVSGS 163
+ + ++ + + + S +PN+ T E T+ T + +Y++SGS
Sbjct: 593 SGSLDRSVKLWNLQNANNK---SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS 649
Query: 164 GDGTLHAWNINTRNEVACWNGN 185
D + W+ + N + G+
Sbjct: 650 KDRGVLFWDKKSGNPLLMLQGH 671
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 141 (54.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 55/201 (27%), Positives = 86/201 (42%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
+GH+ V+S+ +S S SLD +R+WDL N Q I + P T+AF
Sbjct: 61 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQ-IKSIDAGPVDAWTLAFSPDS 118
Query: 67 LVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A G + +F S K DT G + I +S DGK + + I
Sbjct: 119 QYLATGTHVGKVNIFGVESGKKEYSLDT---RGKF--ILSIAYSPDGKYLASGAIDGIIN 173
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ D G+ +LE TF+PD Q +V+ S DG + +++ N +G+
Sbjct: 174 IFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 186 IGVVACLKWAPRRAMFVAASS 206
V + + P FV++SS
Sbjct: 232 ASWVLNVAFCPDDTHFVSSSS 252
Score = 114 (45.2 bits), Expect = 0.00022, P = 0.00022
Identities = 46/190 (24%), Positives = 82/190 (43%)
Query: 26 NDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFD-QQGLVFAVAMEAGA-IKLF 81
+++ ++GSLD V++W R L G V+ D L A + A I+L+
Sbjct: 32 SETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 82 DS------RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKR 135
D +S D GP D + + FS D + + T + + G+K
Sbjct: 92 DLENGKQIKSIDAGPVDAWTLA----------FSPDSQYLATGTHVGKVNIFGVESGKKE 141
Query: 136 CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWA 195
+SL+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++
Sbjct: 142 --YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS 199
Query: 196 PRRAMFVAAS 205
P + V AS
Sbjct: 200 PDSQLLVTAS 209
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 141 (54.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 58/211 (27%), Positives = 92/211 (43%)
Query: 3 DNRI-LRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-- 58
D R+ L++ +GH+ V+S+ +S S SLD +R+WDL N Q I + P
Sbjct: 51 DERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLD-NGKQ-IKSIDAGPVD 108
Query: 59 --TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSM 115
T+AF A G + +F S K DT G + I +S DGK +
Sbjct: 109 AWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT---RGKF--ILSIAYSPDGKYL 163
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ I + D G+ +LE TF+PD Q +V+ S DG + +++
Sbjct: 164 ASGAIDGIINIFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
N +G+ V + + P FV++SS
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 252
Score = 113 (44.8 bits), Expect = 0.00029, P = 0.00029
Identities = 45/185 (24%), Positives = 83/185 (44%)
Query: 26 NDSFMSGSLDHSVRIW---DLRVNACQGILRLRGRPTVAFD-QQGLVFAVAMEAGA-IKL 80
+++ ++GSLD V++W D R++ Q L V+ D L A + A I+L
Sbjct: 32 SETVVTGSLDDLVKVWKWCDERLDL-QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRL 90
Query: 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 140
+D D G + G + + FS D + + T + + G+K +SL
Sbjct: 91 WD---LDNGKQIKSIDAGPV-DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE--YSL 144
Query: 141 EPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM 200
+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++P +
Sbjct: 145 DTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQL 204
Query: 201 FVAAS 205
V AS
Sbjct: 205 LVTAS 209
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 141 (54.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/201 (26%), Positives = 88/201 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
+GH+ V+S+ +SP + S SLD +R+WDL + I + P +VAF
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESG--KQIRAIDAGPVDAWSVAFSPDS 118
Query: 67 LVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A G + +F + K DT G + I +S DGK + + I
Sbjct: 119 QHLATGSHVGKVNIFGVETGKKEYSLDT---RGKF--ILSIAYSPDGKYLASGAIDGIIN 173
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ D G+ +LE TF+PD Q +V+ S DG + + + + A +G+
Sbjct: 174 IFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGH 231
Query: 186 IGVVACLKWAPRRAMFVAASS 206
V + ++P FV++SS
Sbjct: 232 GSWVLNVAFSPDDTHFVSSSS 252
Score = 111 (44.1 bits), Expect = 0.00049, P = 0.00049
Identities = 47/187 (25%), Positives = 81/187 (43%)
Query: 30 MSGSLDHSVRIW---DLRVNACQGILRLRGRPTVAFD--QQGLVFAVAMEAGAIKLFDS- 83
+SGSLD V++W D R+ Q L V+ D G + A + I+L+D
Sbjct: 36 ISGSLDDLVKVWKWSDERLEL-QSTLEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLE 94
Query: 84 -----RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGF 138
R+ D GP D + V FS D + + + + + G+K +
Sbjct: 95 SGKQIRAIDAGPVDAWSVA----------FSPDSQHLATGSHVGKVNIFGVETGKKE--Y 142
Query: 139 SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR 198
SL+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++P
Sbjct: 143 SLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDS 202
Query: 199 AMFVAAS 205
+ V AS
Sbjct: 203 QLLVTAS 209
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 144 (55.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 46/180 (25%), Positives = 78/180 (43%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR------L 54
++ +I F GH+ + SL S +SGS D +IWD+ C L
Sbjct: 356 IHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPK 415
Query: 55 RGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKS 114
G +VA G + A ++L+D+++ G F G V + FS DGKS
Sbjct: 416 NGVTSVAMSPDGRLVAAGSLDNIVRLWDAQT---GYF-LERYEGHLDSVYSVAFSPDGKS 471
Query: 115 MLLTTTNNNIYVLDAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ + + ++ + D G R C + + F+PDG +++SGS D ++ W+
Sbjct: 472 LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWD 531
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 49/207 (23%), Positives = 91/207 (43%)
Query: 19 SLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAG-- 76
S+C SP + +G+ D +V++WD+ Q + D + +G
Sbjct: 332 SVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSGDK 391
Query: 77 AIKLFDSRSYDKGPFDTFLVG----GDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG 132
K++D +KG F +G G V + S DG+ + + +N + + DA G
Sbjct: 392 KAKIWD---IEKGKC-AFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTG 447
Query: 133 EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN-TRNEVAC---WNGNIGV 188
+ E ++ F+PDG+ + SGS D +L W+++ +R+ C +NG+
Sbjct: 448 YFLERY--EGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 505
Query: 189 VACLKWAPRRAMFVAASSVLS--FWIP 213
V + ++P + ++ S S FW P
Sbjct: 506 VLSVAFSPDGSWLISGSKDRSVQFWDP 532
Score = 116 (45.9 bits), Expect = 0.00037, P = 0.00037
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 103 VCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNT---EATFTPDGQYV 159
VC + FSNDGK L T N + + D G+K F E + + F+PDG Y+
Sbjct: 284 VCCVNFSNDGK-YLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYL 342
Query: 160 VSGSGDGTLHAWNINTR 176
+G+ D T+ W+I+T+
Sbjct: 343 ATGAEDKTVKVWDIHTK 359
Score = 115 (45.5 bits), Expect = 0.00048, P = 0.00048
Identities = 49/208 (23%), Positives = 92/208 (44%)
Query: 21 CMSPVNDS-FMSGSLDHSVRIWDL----RVNAC------QGILRLRGRPTVAFDQQGLVF 69
C++ ND +++ + S +I+D+ +V+A G L +R +V F G
Sbjct: 286 CVNFSNDGKYLATGCNRSAQIYDVDTGKKVHAFVDESEKDGDLYIR---SVCFSPDGNYL 342
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
A E +K++D + K TF G ++ + +S+DG+ ++ + + + D
Sbjct: 343 ATGAEDKTVKVWDIHT--KKIQHTFY--GHELDIYSLDYSSDGRFIVSGSGDKKAKIWDI 398
Query: 130 YGGEKRCGFSL---EPSP-NTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
G +C F+L E P N T +PDG+ V +GS D + W+ T + + G+
Sbjct: 399 EKG--KCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGH 456
Query: 186 IGVVACLKWAPRRAMFVAAS--SVLSFW 211
+ V + ++P + S L W
Sbjct: 457 LDSVYSVAFSPDGKSLASGSLDKSLKLW 484
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 142 (55.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 40/163 (24%), Positives = 77/163 (47%)
Query: 15 ERVISLCMSPVNDSFMSGS-LDHSVRIWDLRVNA--CQGILRLRGRPTVAFDQQGLVFAV 71
+ + S+ + S ++ + +D S+ ++DLR ++ + +L+L + FAV
Sbjct: 198 DTITSVAFNQTETSVLASTGIDRSIILYDLRTSSPLSKLVLKLASNAVSWNPMEAFNFAV 257
Query: 72 AMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYG 131
A E + +FD R ++ ++ A V D+ FS G+ ++ + + I + +
Sbjct: 258 ANEDHNVYMFDMRKMNRA---LNVLKDHVAAVMDVDFSPTGEELVTASYDRTIRLWNRAT 314
Query: 132 GEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN 174
G R + + + A FTPD +YV+SGS DG + W N
Sbjct: 315 GHSRDIYHTQRMQRVFS-AKFTPDNKYVLSGSDDGNIRLWRAN 356
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 139 (54.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 57/211 (27%), Positives = 92/211 (43%)
Query: 3 DNRI-LRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-- 58
D R+ L++ +GH+ V+S+ +S S SLD +R+WDL N Q + + P
Sbjct: 51 DERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQ-MKSIDAGPVD 108
Query: 59 --TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSM 115
T+AF A G + +F S K DT G + I +S DGK +
Sbjct: 109 AWTLAFSPDSQYLATGTHMGKVNIFGVESGKKEYSLDT---RGKF--ILSIAYSPDGKYL 163
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ I + D G+ +LE TF+PD Q +V+ S DG + +++
Sbjct: 164 ASGAIDGIINIFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
N +G+ V + + P FV++SS
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 252
Score = 117 (46.2 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 46/189 (24%), Positives = 82/189 (43%)
Query: 27 DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFD-QQGLVFAVAMEAGA-IKLFD 82
++ ++GSLD V++W R + L G V+ D L A + A I+L+D
Sbjct: 33 ETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 92
Query: 83 ------SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRC 136
+S D GP D + + FS D + + T + + G+K
Sbjct: 93 LENGKQMKSIDAGPVDAWTLA----------FSPDSQYLATGTHMGKVNIFGVESGKKE- 141
Query: 137 GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAP 196
+SL+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++P
Sbjct: 142 -YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 197 RRAMFVAAS 205
+ V AS
Sbjct: 201 DSQLLVTAS 209
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 144 (55.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH V S+ ++ + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGE 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + IKL+D R KG F G + V ++FS DGK + ++ + +
Sbjct: 119 FVASGSQDTNIKLWDIRR--KGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F P E F P+ + SGS D T+ W++ V+C G G
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 188 VVACLKWAP 196
V + + P
Sbjct: 233 PVRSILFNP 241
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 46/212 (21%), Positives = 90/212 (42%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMS-GSLDHSVRIWDLRVNACQGILRLRGR--P--TVA 61
L+ H V SL + + ++ G D V +W + C I+ L G P +V
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVR 70
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+ + ++G+I+++D + T + G A +C + F G+ + + +
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLM--GHKANICSLDFHPYGEFVASGSQD 126
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC 181
NI + D K C F F+PDG+++ S + D T+ W++ ++
Sbjct: 127 TNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 182 WNGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
+ G+ G V +++ P + + SS + FW
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 123 (48.4 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 47/173 (27%), Positives = 71/173 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--- 61
+ILR GHK + SL P + SGS D ++++WD+R C + R RG
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 62 -FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
F G A A + +KL+D + F G T V ++F + + ++
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKM--MSEF--PGHTGPVNVVEFHPNEYLLASGSS 209
Query: 121 NNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGT-LHAW 171
+ I D EK S +E P F PDG + SG D ++ W
Sbjct: 210 DRTIRFWDL---EKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGW 259
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 141 (54.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 47/202 (23%), Positives = 94/202 (46%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQ 65
F+GH ++ L +P + +GS+D + ++WD++ + ++ L G +++FD
Sbjct: 173 FRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSG--EEVVTLTGHLAEIISLSFDTS 230
Query: 66 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
G + ++D+ + K T + G AE+ FS D S++LT + +
Sbjct: 231 GDRIITGSFDHTVVVWDASTGRK--VHTLI--GHCAEISSALFSWDC-SLILTGSMDKTC 285
Query: 126 VL-DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG 184
+L DA G +C +L + ++ F G+ + + S DGT +N TR + G
Sbjct: 286 MLWDATSG--KCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEG 343
Query: 185 NIGVVACLKWAPRRAMFVAASS 206
+ G ++ + + P+ + SS
Sbjct: 344 HEGEISKISFNPQGNRLLTGSS 365
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 44/168 (26%), Positives = 74/168 (44%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDL----RVNACQGILRLRGRPTVAFDQQGL 67
GH +ISL D ++GS DH+V +WD +V+ G ++D L
Sbjct: 217 GHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCS-L 275
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ +M+ + L+D+ S G L G D E+ D F GK + + + V
Sbjct: 276 ILTGSMDKTCM-LWDATS---GKCVATLTGHDD-EILDSCFDYTGKLIATASADGTARVY 330
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+A ++C LE ++ +F P G +++GS D T W++ T
Sbjct: 331 NAT--TRKCITKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDVQT 376
>WB|WBGene00017178 [details] [associations]
symbol:atg-16.1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:FO081068 PIR:T15958
RefSeq:NP_508768.1 ProteinModelPortal:Q19124 SMR:Q19124
PaxDb:Q19124 EnsemblMetazoa:F02E8.5 GeneID:180717
KEGG:cel:CELE_F02E8.5 CTD:180717 WormBase:F02E8.5 eggNOG:COG2319
GeneTree:ENSGT00700000104505 HOGENOM:HOG000016928 InParanoid:Q19124
OMA:STRDDTI NextBio:910606 InterPro:IPR020472 PRINTS:PR00320
Uniprot:Q19124
Length = 578
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 50/201 (24%), Positives = 90/201 (44%)
Query: 3 DN-RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA 61
DN R+L GH ++V + + S +SGS D ++IWD++ C L +
Sbjct: 366 DNSRLLSTLSGHSDQVTCVKFYQ-SHSAVSGSADRVIKIWDIQNQRCSRSLFPASKVLDV 424
Query: 62 FDQQGL---VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
G +FA ++ +D RS D P T +GG + D+ S G +L++
Sbjct: 425 ATNMGASPSLFASGHFDKKLRFYDGRSTD--PVRTVDMGGRITSL-DVTMS--GCELLVS 479
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTN--TEATFTPDGQYVVSGSGDGTLHAWNIN-T 175
T ++ I ++D + +S E ++ + + +YV +GS +G++ WN N T
Sbjct: 480 TRDDTISLIDLRTFQTVHCYSAENYRTSSDLSRVVLSSGNEYVAAGSSNGSIFVWNRNST 539
Query: 176 RNEVACWNGNIGVVACLKWAP 196
+ E + + + L W P
Sbjct: 540 KLEKQLCSNSENAIFSLSWNP 560
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 143 (55.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 51/208 (24%), Positives = 88/208 (42%)
Query: 3 DNRILRYFKGHKERVISL--CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG---R 57
DNR+ GH +V++ P+ ++GS D +++IWDLR AC + G
Sbjct: 393 DNRLRHTLTGHSGKVMAAKYVQEPIK--VVTGSHDRTLKIWDLRSIACIET-KFAGSSCN 449
Query: 58 PTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLL 117
V D G I+ +D R+ +K D + A++ + S D ++
Sbjct: 450 DLVTTDSLGSTIISGHYDKKIRFWDIRT-EKQADDVLM----PAKITSLDLSKDCNYLIC 504
Query: 118 TTTNNNIYVLDAYGGEKRCGFSLEPSPNTN--TEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ ++ I +LD + F+ E + A+F G + GS DG ++ WN+N
Sbjct: 505 SVRDDTIKLLDLRKNQVISTFTNEHFKISCDFARASFNSSGLKIACGSADGAIYIWNVNG 564
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVA 203
E A G+ V + W+P M +
Sbjct: 565 FLE-ATLKGHSTAVNAVSWSPNNNMLAS 591
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 138 (53.6 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 53/201 (26%), Positives = 89/201 (44%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
+GH+ V+S+ +SP + S SLD +R+WDL + I + P +VAF
Sbjct: 61 EGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESG--KQIRSIDAGPVDAWSVAFSPDS 118
Query: 67 LVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A G + +F + K DT G + I +S DGK + + I
Sbjct: 119 QHLATGSHVGKVNIFGVETGKKEYSLDT---RGKF--ILSIAYSPDGKYLASGAIDGIIN 173
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ D G+ +LE TF+ D Q +V+ S DG + +++ + A +G+
Sbjct: 174 IFDIATGKLL--HTLEGHAMPIRSLTFSTDSQLLVTASDDGYIKIYDVQHASLAATLSGH 231
Query: 186 IGVVACLKWAPRRAMFVAASS 206
V + ++P A FV++SS
Sbjct: 232 GSWVLNVAFSPDDAHFVSSSS 252
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH V S+ ++ + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGE 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + IKL+D R KG F G + V ++FS DGK + ++ + +
Sbjct: 119 FVASGSQDTNIKLWDIRR--KGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F P E F P+ + SGS D T+ W++ V+C G G
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 188 VVACLKWAP 196
V + + P
Sbjct: 233 PVRSVLFNP 241
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 46/212 (21%), Positives = 90/212 (42%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMS-GSLDHSVRIWDLRVNACQGILRLRGR--P--TVA 61
L+ H V SL + + ++ G D V +W + C I+ L G P +V
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVR 70
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+ + ++G+I+++D + T + G A +C + F G+ + + +
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLM--GHKANICSLDFHPYGEFVASGSQD 126
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC 181
NI + D K C F F+PDG+++ S + D T+ W++ ++
Sbjct: 127 TNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 182 WNGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
+ G+ G V +++ P + + SS + FW
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 47/173 (27%), Positives = 71/173 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--- 61
+ILR GHK + SL P + SGS D ++++WD+R C + R RG
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 62 -FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
F G A A + +KL+D + F G T V ++F + + ++
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKM--MSEF--PGHTGPVNVVEFHPNEYLLASGSS 209
Query: 121 NNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGT-LHAW 171
+ I D EK S +E P F PDG + SG D ++ W
Sbjct: 210 DRTIRFWDL---EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGW 259
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH V S+ ++ + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGE 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + IKL+D R KG F G + V ++FS DGK + ++ + +
Sbjct: 119 FVASGSQDTNIKLWDIRR--KGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F P E F P+ + SGS D T+ W++ V+C G G
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 188 VVACLKWAP 196
V + + P
Sbjct: 233 PVRSVLFNP 241
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 46/212 (21%), Positives = 90/212 (42%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMS-GSLDHSVRIWDLRVNACQGILRLRGR--P--TVA 61
L+ H V SL + + ++ G D V +W + C I+ L G P +V
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVR 70
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+ + ++G+I+++D + T + G A +C + F G+ + + +
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLM--GHKANICSLDFHPYGEFVASGSQD 126
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC 181
NI + D K C F F+PDG+++ S + D T+ W++ ++
Sbjct: 127 TNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 182 WNGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
+ G+ G V +++ P + + SS + FW
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 124 (48.7 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 47/173 (27%), Positives = 71/173 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--- 61
+ILR GHK + SL P + SGS D ++++WD+R C + R RG
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 62 -FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
F G A A + +KL+D + F G T V ++F + + ++
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKM--MSEF--PGHTGPVNVVEFHPNEYLLASGSS 209
Query: 121 NNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGT-LHAW 171
+ I D EK S +E P F PDG + SG D ++ W
Sbjct: 210 DRTIRFWDL---EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGW 259
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 143 (55.4 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH V S+ ++ + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGE 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + IKL+D R KG F G + V ++FS DGK + ++ + +
Sbjct: 119 FVASGSQDTNIKLWDIRR--KGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F P E F P+ + SGS D T+ W++ V+C G G
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 188 VVACLKWAP 196
V + + P
Sbjct: 233 PVRSVLFNP 241
Score = 125 (49.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 63/237 (26%), Positives = 97/237 (40%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--- 61
+ILR GHK + SL P + SGS D ++++WD+R C + R RG
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 62 -FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
F G A A + +KL+D + F G T V ++F + + ++
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKM--MSEF--PGHTGPVNVVEFHPNEYLLASGSS 209
Query: 121 NNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGT-LHAWNINTRNE 178
+ I D EK S +E P F PDG + SG D ++ W +
Sbjct: 210 DRTIRFWDL---EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFD 266
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSSNSTDESTDPQATVKSDQ 234
V N G VA L + + VA S S +S ++ + + T T Q V++ Q
Sbjct: 267 VVLVNW--GKVADLAICNDQLIGVAFSQSNVSSYVVD-LTRVTRTGTVTQDPVQASQ 320
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 143 (55.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 51/189 (26%), Positives = 82/189 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH V S+ ++ + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGE 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + IKL+D R KG F G + V ++FS DGK + ++ + +
Sbjct: 119 FVASGSQDTNIKLWDIRR--KGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F P E F P+ + SGS D T+ W++ V+C G G
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 188 VVACLKWAP 196
V + + P
Sbjct: 233 PVRSVLFNP 241
Score = 126 (49.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 63/237 (26%), Positives = 98/237 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--- 61
+ILR GHK + SL P + SGS D ++++WD+R C + R RG
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 62 -FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
F G A A + +KL+D + F G T V ++F + + ++
Sbjct: 154 RFSPDGKWLASAADDHTVKLWDLTAGKM--MSEF--PGHTGPVNVVEFHPNEYLLASGSS 209
Query: 121 NNNIYVLDAYGGEKRCGFS-LEPSPNTNTEATFTPDGQYVVSGSGDGT-LHAWNINTRNE 178
+ I D EK S +E P F PDG + SG D ++ W +
Sbjct: 210 DRTIRFWDL---EKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWEPERCFD 266
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAAS-SVLSFWIPNPSSNSTDESTDPQATVKSDQ 234
V N G VA L + + VA S S +S ++ + + T T Q V+++Q
Sbjct: 267 VVLVNW--GKVADLAICNDQLIGVAFSQSNVSSYVVD-LTRVTRTGTVTQDPVQANQ 320
>UNIPROTKB|A4FUE3 [details] [associations]
symbol:RBBP5 "RBBP5 protein" species:9913 "Bos taurus"
[GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188 "Set1C/COMPASS
complex" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0043627 "response to estrogen
stimulus" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0035064 "methylated
histone residue binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 eggNOG:COG2319
GO:GO:0006974 GO:GO:0044212 GO:GO:0043627 GO:GO:0042800
GO:GO:0048188 GO:GO:0071339 CTD:5929 HOVERGEN:HBG054324 KO:K14961
OMA:YPEEFDG OrthoDB:EOG4STS4D GeneTree:ENSGT00530000064100
HOGENOM:HOG000204856 EMBL:DAAA02041932 EMBL:BC114753
IPI:IPI00733210 RefSeq:NP_001076871.1 UniGene:Bt.98637 SMR:A4FUE3
STRING:A4FUE3 Ensembl:ENSBTAT00000021204 GeneID:510455
KEGG:bta:510455 InParanoid:A4FUE3 NextBio:20869451 Uniprot:A4FUE3
Length = 538
Score = 124 (48.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 119
+FD++G G I + + S D F +T + I+F+ G L+ T
Sbjct: 158 SFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINT 217
Query: 120 TNNNIYVLDAYGGE-KRCGFSLEPSPNTNTE----------ATFTPDGQYVVSGSG-DGT 167
+ I V D G E CG EP P + F+ DG+Y+V+GS
Sbjct: 218 ADRIIRVYD--GREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHA 275
Query: 168 LHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVAASS-VLSFWIPNPSSN 218
L+ W + N V +G G ++ + W P R + + SS V+S W N N
Sbjct: 276 LYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVEN 328
Score = 58 (25.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC 48
I + H V SLC S +S S D+ V WD+ C
Sbjct: 58 IAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDC 100
>UNIPROTKB|Q15291 [details] [associations]
symbol:RBBP5 "Retinoblastoma-binding protein 5"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0048188 "Set1C/COMPASS complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0043627
"response to estrogen stimulus" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0035097
"histone methyltransferase complex" evidence=IDA;IPI] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0035064 "methylated
histone residue binding" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
PROSITE:PS00678 eggNOG:COG2319 EMBL:CH471067 GO:GO:0006351
GO:GO:0006974 GO:GO:0044212 GO:GO:0043627 GO:GO:0035064
GO:GO:0048188 GO:GO:0051568 GO:GO:0071339 EMBL:AL583832
EMBL:AC093422 PDB:3P4F PDBsum:3P4F EMBL:X85134 EMBL:AK290137
EMBL:BC037284 EMBL:BC053856 EMBL:BC075059 EMBL:BC075060
IPI:IPI00478230 IPI:IPI00645975 PIR:A57624 RefSeq:NP_001180201.1
RefSeq:NP_001180202.1 RefSeq:NP_005048.2 UniGene:Hs.519230
ProteinModelPortal:Q15291 SMR:Q15291 DIP:DIP-29224N IntAct:Q15291
STRING:Q15291 PhosphoSite:Q15291 DMDM:209572664 PaxDb:Q15291
PRIDE:Q15291 DNASU:5929 Ensembl:ENST00000264515
Ensembl:ENST00000367164 GeneID:5929 KEGG:hsa:5929 UCSC:uc001hbu.2
UCSC:uc001hbv.2 CTD:5929 GeneCards:GC01M205055 H-InvDB:HIX0023636
HGNC:HGNC:9888 MIM:600697 neXtProt:NX_Q15291 PharmGKB:PA34252
HOVERGEN:HBG054324 InParanoid:Q15291 KO:K14961 OMA:YPEEFDG
OrthoDB:EOG4STS4D PhylomeDB:Q15291 GenomeRNAi:5929 NextBio:23098
Bgee:Q15291 CleanEx:HS_RBBP5 Genevestigator:Q15291
GermOnline:ENSG00000117222 Uniprot:Q15291
Length = 538
Score = 124 (48.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 119
+FD++G G I + + S D F +T + I+F+ G L+ T
Sbjct: 158 SFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINT 217
Query: 120 TNNNIYVLDAYGGE-KRCGFSLEPSPNTNTE----------ATFTPDGQYVVSGSG-DGT 167
+ I V D G E CG EP P + F+ DG+Y+V+GS
Sbjct: 218 ADRIIRVYD--GREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHA 275
Query: 168 LHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVAASS-VLSFWIPNPSSN 218
L+ W + N V +G G ++ + W P R + + SS V+S W N N
Sbjct: 276 LYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVEN 328
Score = 58 (25.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC 48
I + H V SLC S +S S D+ V WD+ C
Sbjct: 58 IAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDC 100
>MGI|MGI:1918367 [details] [associations]
symbol:Rbbp5 "retinoblastoma binding protein 5"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0035064
"methylated histone residue binding" evidence=ISO] [GO:0035097
"histone methyltransferase complex" evidence=ISO] [GO:0043627
"response to estrogen stimulus" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0048188 "Set1C/COMPASS complex" evidence=ISO] [GO:0051568
"histone H3-K4 methylation" evidence=ISO] [GO:0071339 "MLL1
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1918367 GO:GO:0006355 Gene3D:2.130.10.10
PROSITE:PS00678 eggNOG:COG2319 EMBL:CH466520 GO:GO:0006351
GO:GO:0006974 GO:GO:0044212 GO:GO:0043627 GO:GO:0042800
GO:GO:0048188 GO:GO:0071339 CTD:5929 HOVERGEN:HBG054324 KO:K14961
OMA:YPEEFDG OrthoDB:EOG4STS4D EMBL:AK049247 EMBL:AK154782
EMBL:AK171177 EMBL:BC057632 EMBL:BC060186 IPI:IPI00226384
IPI:IPI00955092 RefSeq:NP_766105.2 UniGene:Mm.132868 PDB:2XL2
PDB:2XL3 PDBsum:2XL2 PDBsum:2XL3 ProteinModelPortal:Q8BX09
SMR:Q8BX09 IntAct:Q8BX09 STRING:Q8BX09 PhosphoSite:Q8BX09
PaxDb:Q8BX09 PRIDE:Q8BX09 Ensembl:ENSMUST00000027700 GeneID:213464
KEGG:mmu:213464 UCSC:uc007cow.2 UCSC:uc007coy.2
GeneTree:ENSGT00530000064100 HOGENOM:HOG000204856 InParanoid:Q3TBL4
EvolutionaryTrace:Q8BX09 NextBio:373990 Bgee:Q8BX09
Genevestigator:Q8BX09 Uniprot:Q8BX09
Length = 538
Score = 124 (48.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 119
+FD++G G I + + S D F +T + I+F+ G L+ T
Sbjct: 158 SFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINT 217
Query: 120 TNNNIYVLDAYGGE-KRCGFSLEPSPNTNTE----------ATFTPDGQYVVSGSG-DGT 167
+ I V D G E CG EP P + F+ DG+Y+V+GS
Sbjct: 218 ADRIIRVYD--GREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHA 275
Query: 168 LHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVAASS-VLSFWIPNPSSN 218
L+ W + N V +G G ++ + W P R + + SS V+S W N N
Sbjct: 276 LYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVEN 328
Score = 58 (25.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC 48
I + H V SLC S +S S D+ V WD+ C
Sbjct: 58 IAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDC 100
>RGD|1305532 [details] [associations]
symbol:Rbbp5 "retinoblastoma binding protein 5" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISO] [GO:0035064
"methylated histone residue binding" evidence=IEA;ISO] [GO:0035097
"histone methyltransferase complex" evidence=ISO] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043627 "response to estrogen stimulus"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0048188 "Set1C/COMPASS complex"
evidence=IEA;ISO] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO] [GO:0071339 "MLL1 complex" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305532 Gene3D:2.130.10.10 GO:GO:0006974 GO:GO:0044212
GO:GO:0043627 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
EMBL:CH473958 CTD:5929 KO:K14961 OrthoDB:EOG4STS4D
GeneTree:ENSGT00530000064100 IPI:IPI00371988 RefSeq:NP_001100644.1
UniGene:Rn.11774 Ensembl:ENSRNOT00000036110 GeneID:304794
KEGG:rno:304794 UCSC:RGD:1305532 NextBio:653624 Uniprot:D3ZC01
Length = 538
Score = 124 (48.7 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 119
+FD++G G I + + S D F +T + I+F+ G L+ T
Sbjct: 158 SFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINT 217
Query: 120 TNNNIYVLDAYGGE-KRCGFSLEPSPNTNTE----------ATFTPDGQYVVSGSG-DGT 167
+ I V D G E CG EP P + F+ DG+Y+V+GS
Sbjct: 218 ADRIIRVYD--GREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHA 275
Query: 168 LHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVAASS-VLSFWIPNPSSN 218
L+ W + N V +G G ++ + W P R + + SS V+S W N N
Sbjct: 276 LYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVEN 328
Score = 58 (25.5 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC 48
I + H V SLC S +S S D+ V WD+ C
Sbjct: 58 IAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDC 100
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 140 (54.3 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 49/196 (25%), Positives = 87/196 (44%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGRPTVAFDQQGLVF 69
GH+ + S+ P +S S D ++++WD + L+ + FD+ G +
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
A IKL+D ++YD T L G D C ++F+ G ++ ++ + I V +A
Sbjct: 164 ASCSADLTIKLWDFQTYDC--VKT-LHGHDHNVSC-VRFTPSGDQLISSSRDKTIKVWEA 219
Query: 130 YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVV 189
G C +L + + T + DG + S S D T+ WNI +A + + VV
Sbjct: 220 ATGY--CIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVV 277
Query: 190 ACLKWAPRRAMFVAAS 205
CL ++ + + S
Sbjct: 278 ECLAFSTANIIDIPGS 293
>UNIPROTKB|F1S359 [details] [associations]
symbol:RBBP5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 GO:GO:0006974 GO:GO:0044212 GO:GO:0043627
GO:GO:0042800 GO:GO:0048188 GO:GO:0071339 OMA:YPEEFDG
GeneTree:ENSGT00530000064100 EMBL:FP103014
Ensembl:ENSSSCT00000016659 Uniprot:F1S359
Length = 546
Score = 124 (48.7 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 47/173 (27%), Positives = 72/173 (41%)
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 119
+FD++G G I + + S D F +T + I+F+ G L+ T
Sbjct: 163 SFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINT 222
Query: 120 TNNNIYVLDAYGGE-KRCGFSLEPSPNTNTE----------ATFTPDGQYVVSGSG-DGT 167
+ I V D G E CG EP P + F+ DG+Y+V+GS
Sbjct: 223 ADRIIRVYD--GREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHA 280
Query: 168 LHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVAASS-VLSFWIPNPSSN 218
L+ W + N V +G G ++ + W P R + + SS V+S W N N
Sbjct: 281 LYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVEN 333
Score = 58 (25.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC 48
I + H V SLC S +S S D+ V WD+ C
Sbjct: 63 IAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDC 105
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 137 (53.3 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 57/211 (27%), Positives = 92/211 (43%)
Query: 3 DNRI-LRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-- 58
D R+ L++ +GH+ V+S+ +S S SLD +R+WDL N Q + + P
Sbjct: 51 DERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLE-NGKQ-MKSIDAGPVD 108
Query: 59 --TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSM 115
T+AF A G + +F S K DT G + I +S DGK +
Sbjct: 109 AWTLAFSPDSQHLATGTHMGKVNIFGVESGKKEYSLDT---RGKF--ILSIAYSPDGKYL 163
Query: 116 LLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ I + D G+ +LE TF+PD Q +V+ S DG + +++
Sbjct: 164 ASGAIDGIINIFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH 221
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
N +G+ V + + P FV++SS
Sbjct: 222 ANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 252
Score = 118 (46.6 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 46/189 (24%), Positives = 82/189 (43%)
Query: 27 DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFD-QQGLVFAVAMEAGA-IKLFD 82
++ ++GSLD V++W R + L G V+ D L A + A I+L+D
Sbjct: 33 ETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWD 92
Query: 83 ------SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRC 136
+S D GP D + + FS D + + T + + G+K
Sbjct: 93 LENGKQMKSIDAGPVDAWTLA----------FSPDSQHLATGTHMGKVNIFGVESGKKE- 141
Query: 137 GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAP 196
+SL+ ++PDG+Y+ SG+ DG ++ ++I T + G+ + L ++P
Sbjct: 142 -YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP 200
Query: 197 RRAMFVAAS 205
+ V AS
Sbjct: 201 DSQLLVTAS 209
>POMBASE|SPAC630.14c [details] [associations]
symbol:tup12 "transcriptional corepressor Tup12"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043156 "chromatin remodeling in response to cation stress"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] [GO:0071473 "cellular response to cation stress"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC630.14c InterPro:IPR001632 GO:GO:0005829
GO:GO:0003714 GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 PRINTS:PR00319 HOGENOM:HOG000200558
OrthoDB:EOG4KM2C2 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
EMBL:U92792 PIR:T38992 RefSeq:NP_592910.2 ProteinModelPortal:Q9UUG8
STRING:Q9UUG8 EnsemblFungi:SPAC630.14c.1 GeneID:2543402
NextBio:20804417 GO:GO:0043156 Uniprot:Q9UUG8
Length = 598
Score = 141 (54.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 53/215 (24%), Positives = 90/215 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVAFD 63
R+ R GH++ + SL S + +SGS D +V +WD+ + IL G TV F
Sbjct: 379 RVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFS 438
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
G A I+++ S G L G + + V + FS DGK ++ + +N
Sbjct: 439 PDGQFIAAGSLDKVIRIWTS----SGTLVEQLHGHEES-VYSVAFSPDGKYLVSGSLDNT 493
Query: 124 IYVLDA----------YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
I + + Y C + + T +PDG++++SGS D T+ W+
Sbjct: 494 IKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWSP 553
Query: 174 NTRNEVACWNGNIGVVACLKWAPRRAMFVAASSVL 208
++ + G+ V + +P F S L
Sbjct: 554 DSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDL 588
>UNIPROTKB|F1P8Q5 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:AAEX03015272
ProteinModelPortal:F1P8Q5 Ensembl:ENSCAFT00000023270 Uniprot:F1P8Q5
Length = 340
Score = 137 (53.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 46/167 (27%), Positives = 71/167 (42%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDK--GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + +LFD R+ + D ++ G T+ + FS G+ + + N
Sbjct: 240 AICTGSDDASCRLFDLRADQELTAYSDESIICGITS----VAFSLSGRLLFAGYDDFNCN 295
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ D+ GE R G L N + T DG V +GS D L WN
Sbjct: 296 IWDSMKGE-RVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
>UNIPROTKB|P79147 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9615 "Canis lupus
familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:U52916 EMBL:AY751537 EMBL:DQ672621
RefSeq:NP_001003004.1 UniGene:Cfa.5 ProteinModelPortal:P79147
SMR:P79147 PRIDE:P79147 GeneID:403511 KEGG:cfa:403511 CTD:2784
eggNOG:NOG269251 KO:K07825 NextBio:20817024 Uniprot:P79147
Length = 340
Score = 137 (53.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 46/167 (27%), Positives = 71/167 (42%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDK--GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + +LFD R+ + D ++ G T+ + FS G+ + + N
Sbjct: 240 AICTGSDDASCRLFDLRADQELTAYSDESIICGITS----VAFSLSGRLLFAGYDDFNCN 295
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ D+ GE R G L N + T DG V +GS D L WN
Sbjct: 296 IWDSMKGE-RVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKVWN 340
>DICTYBASE|DDB_G0275323 [details] [associations]
symbol:tipD "autophagy protein 16" species:44689
"Dictyostelium discoideum" [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0034274 "Atg12-Atg5-Atg16 complex"
evidence=ISS] [GO:0019776 "Atg8 ligase activity" evidence=ISS]
[GO:0016236 "macroautophagy" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275323
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 OMA:LETECQE
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0031154
GO:GO:0016236 GO:GO:0034274 GO:GO:0019776 EMBL:AF019236 PIR:T08602
RefSeq:XP_643673.1 ProteinModelPortal:O15736 STRING:O15736
EnsemblProtists:DDB0215341 GeneID:8619939 KEGG:ddi:DDB_G0275323
ProtClustDB:CLSZ2729185 Uniprot:O15736
Length = 612
Score = 121 (47.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 42/184 (22%), Positives = 81/184 (44%)
Query: 30 MSGSLDHSVRIWDLRVNAC-QGILRLRG-RPTVAFDQQGLVFAVAMEAGAIKLFDSRSYD 87
++GS D ++++WDL+ C + I V G A +++ +DS +
Sbjct: 423 VTGSHDRTIKLWDLQKGYCTRTIFCFSSCNDLVILGGSGTHLASGHVDHSVRFWDSNA-- 480
Query: 88 KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN-IYVLDAYGGEKRCGFSLEPSPNT 146
G L ++ I S + +LT + ++ + ++D + F +P
Sbjct: 481 -GEPTQVLSSIHEGQITSITNSPTNTNQILTNSRDHTLKIIDIRTFDTIRTFK-DPEYRN 538
Query: 147 N---TEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW---NGNIGVVACLKWAPRRAM 200
T+A+++PDG+Y+ SGS DG++ W+ V + N V C W+P +
Sbjct: 539 GLNWTKASWSPDGRYIASGSIDGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLANI 598
Query: 201 FVAA 204
F++A
Sbjct: 599 FISA 602
Score = 61 (26.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWD 42
G + ++S+ SP ++S + S D+S R+W+
Sbjct: 364 GASQSIVSVSFSPNDESILGTSNDNSARLWN 394
Score = 55 (24.4 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/43 (18%), Positives = 21/43 (48%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDL 43
M ++ + + GH + + + + + +G D V++WD+
Sbjct: 311 MLPSKAKKRWTGHNSEIYCMAFNSIGNLLATGGGDKCVKVWDV 353
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 141 (54.7 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 52/189 (27%), Positives = 81/189 (42%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH V + + + ++GSL S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTSAVGCIQFNSSEERVVAGSLSGSLRLWDLE--AAKILRTLMGHKASISSLDFHPMGE 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A IKL+D R KG F G T V + FS DGK + + ++ + +
Sbjct: 119 YLASGSVDSNIKLWDVRR--KGC--VFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F+ S N F P+ + SGS D T+ W++ N + G G
Sbjct: 175 DLIAGKMITEFTSHTSA-VNV-VQFHPNEYLLASGSADRTVKLWDLEKFNMIGSSEGETG 232
Query: 188 VVACLKWAP 196
VV + + P
Sbjct: 233 VVRSVLFNP 241
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 47/173 (27%), Positives = 76/173 (43%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT----V 60
+ILR GHK + SL P+ + SGS+D ++++WD+R C + R +G +
Sbjct: 96 KILRTLMGHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGC--VFRYKGHTQAVRCL 153
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
AF G A A + +KL+D + G T T+ V ++F + + +
Sbjct: 154 AFSPDGKWLASASDDSTVKLWDLIA---GKMITEFTS-HTSAVNVVQFHPNEYLLASGSA 209
Query: 121 NNNIYVLDAYGGEK--RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
+ + + D EK G S E F PDG + SGS + TL +
Sbjct: 210 DRTVKLWDL---EKFNMIGSS-EGETGVVRSVLFNPDGSCLYSGS-ENTLRVY 257
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 140 (54.3 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 50/182 (27%), Positives = 79/182 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH V S+ ++ + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE--AAKILRTLMGHKANICSLDFHPYGE 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A + IKL+D R KG F G + V ++FS DGK + ++ + +
Sbjct: 119 FVASGSQDTNIKLWDIRR--KGC--VFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F P E F P+ + SGS D T+ W++ V+C G G
Sbjct: 175 DLTAGKMMSEFPGHTGPVNVVE--FHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPG 232
Query: 188 VV 189
V
Sbjct: 233 PV 234
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/212 (21%), Positives = 90/212 (42%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMS-GSLDHSVRIWDLRVNACQGILRLRGR--P--TVA 61
L+ H V SL + + ++ G D V +W + C I+ L G P +V
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVR 70
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+ + ++G+I+++D + T + G A +C + F G+ + + +
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLM--GHKANICSLDFHPYGEFVASGSQD 126
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC 181
NI + D K C F F+PDG+++ S + D T+ W++ ++
Sbjct: 127 TNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 182 WNGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
+ G+ G V +++ P + + SS + FW
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSSDRTIRFW 216
Score = 112 (44.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--- 61
+ILR GHK + SL P + SGS D ++++WD+R C + R RG
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 62 -FDQQGLVFAVAMEAGAIKLFD 82
F G A A + +KL+D
Sbjct: 154 RFSPDGKWLASAADDHTVKLWD 175
Score = 45 (20.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 140 LEPSPNTNTEAT--FTPDGQYVVSGSGDGT-LHAW 171
L P+P++ + F PDG + SG D ++ W
Sbjct: 281 LRPTPHSRLPRSVLFNPDGCCLYSGCQDSLRVYGW 315
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 136 (52.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 53/191 (27%), Positives = 84/191 (43%)
Query: 27 DSFMSGSLDHSVRIWDLRV-NACQGILRLRGRP----TVAFDQQGLVFAVAMEAGAIKLF 81
D ++G LD V++WDL+ N + +L+G +VA G A + + L+
Sbjct: 53 DFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLW 112
Query: 82 DSRSYDK------GPFDTFLVGGDTAEVCDIKFSNDGK-SMLLTTTNNNIYVLDAYGGEK 134
D+RS DK GP D + V I NDGK SM T LDA G+
Sbjct: 113 DARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGK- 171
Query: 135 RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKW 194
++L ++PDG+Y+ SG+ DG + +++ V G+ V L +
Sbjct: 172 ---YTLS--------IAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCF 220
Query: 195 APRRAMFVAAS 205
+P + + AS
Sbjct: 221 SPNSQLLLTAS 231
Score = 129 (50.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 49/208 (23%), Positives = 89/208 (42%)
Query: 3 DNRI-LRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-- 58
DN + LR+ KGH V+S+ +S + S SLD ++ +WD R + +L
Sbjct: 72 DNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLW 131
Query: 59 TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLT 118
TV F + G I ++ S + G + L + I +S DGK +
Sbjct: 132 TVQFSPCNKYVISGLNDGKISMY---SVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASG 188
Query: 119 TTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNE 178
+ I + D G + +LE F+P+ Q +++ S DG + +++ +
Sbjct: 189 AIDGIITIFDVAAG--KVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHSDV 246
Query: 179 VACWNGNIGVVACLKWAPRRAMFVAASS 206
V +G+ V C+ ++ F ++SS
Sbjct: 247 VGTLSGHASWVLCVAFSEDGKHFASSSS 274
>UNIPROTKB|F1NSH5 [details] [associations]
symbol:RBBP5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0048188 "Set1C/COMPASS complex"
evidence=IEA] [GO:0071339 "MLL1 complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 GO:GO:0006974 GO:GO:0044212 GO:GO:0043627
GO:GO:0042800 GO:GO:0048188 GO:GO:0071339 OMA:YPEEFDG
GeneTree:ENSGT00530000064100 EMBL:AADN02044912 IPI:IPI00651381
Ensembl:ENSGALT00000000943 ArrayExpress:F1NSH5 Uniprot:F1NSH5
Length = 530
Score = 121 (47.7 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 46/173 (26%), Positives = 72/173 (41%)
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 119
+FD++G G I + + + D F +T + I+F+ G L+ T
Sbjct: 158 SFDRRGEYIYTGNAKGKILVLKTDTQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINT 217
Query: 120 TNNNIYVLDAYGGE-KRCGFSLEPSPNTNTE----------ATFTPDGQYVVSGSG-DGT 167
+ I V D G E CG EP P + F+ DG+Y+V+GS
Sbjct: 218 ADRIIRVYD--GREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHA 275
Query: 168 LHAWNINTRNEVACWNGNIG-VVACLKWAPRRAMFVAASS-VLSFWIPNPSSN 218
L+ W + N V +G G ++ + W P R + + SS V+S W N N
Sbjct: 276 LYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVEN 328
Score = 58 (25.5 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC 48
I + H V SLC S +S S D+ V WD+ C
Sbjct: 58 IAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDC 100
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 139 (54.0 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 60/215 (27%), Positives = 99/215 (46%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAF 62
D R+ GH +V+S N +SGS D ++++WDLR C+ + L T AF
Sbjct: 378 DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCEEMQSLCVLMTFAF 437
Query: 63 DQQGL--VFA-------VAME----AG----AIKLFDSRSYDKGPFDTFLVGGDTAEVCD 105
G+ VFA V E +G I+ +D RS + + L+G TA D
Sbjct: 438 -LLGIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRS-ESVVREMELLGKITA--LD 493
Query: 106 IKFSNDGKSMLLTTTNNNIY-VLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSG 162
+ N ++ LL+ + +++ ++D + FS + T F+PDG YV +G
Sbjct: 494 L---NPERTELLSCSRDDLLKIIDLRTNAIKQSFSAPGFKCGSDWTRVVFSPDGSYVAAG 550
Query: 163 SGDGTLHAWNINT-RNEVACWNGNIGVVACLKWAP 196
S DG+L+ W++ T + E + + + WAP
Sbjct: 551 SADGSLYVWSVLTGKVEKVLSKQHSSSINAVAWAP 585
>UNIPROTKB|Q40687 [details] [associations]
symbol:LOC_Os03g46650 "Guanine nucleotide-binding protein
subunit beta" species:39947 "Oryza sativa Japonica Group"
[GO:0005515 "protein binding" evidence=IPI] [GO:0007186 "G-protein
coupled receptor signaling pathway" evidence=IEP;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005783 GO:GO:0005886 GO:GO:0009723
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007186 GO:GO:0048527 GO:GO:0009817 GO:GO:0009845
GO:GO:0009887 GO:GO:0004871 GO:GO:0010154 GO:GO:0030968
GO:GO:0009867 PRINTS:PR00319 GO:GO:0080008 HOGENOM:HOG000176356
OMA:CMLWDIE InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X89737
EMBL:AC133930 PIR:T03765 ProteinModelPortal:Q40687 IntAct:Q40687
STRING:Q40687 EnsemblPlants:LOC_Os03g46650.1 Gramene:Q40687
Uniprot:Q40687
Length = 380
Score = 135 (52.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 48/181 (26%), Positives = 77/181 (42%)
Query: 12 GHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
GH V+SL ++ N + F+SGS D +VR+WD+R+ A + + G +V F G
Sbjct: 203 GHTADVLSLSINSSNSNMFVSGSCDATVRLWDIRI-ASRAVRTYHGHEGDINSVKFFPDG 261
Query: 67 LVFAVAMEAGAIKLFDSRS------YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
F + G +LFD R+ Y + P + V I FS G+ + +
Sbjct: 262 QRFGTGSDDGTCRLFDVRTGHQLQVYSREPDRN---DNELPTVTSIAFSISGRLLFAGYS 318
Query: 121 NNNIYVLDAYGGEKRCGF-SLEPSPNTNTEAT-FTPDGQYVVSGSGDGTLHAWNINTRNE 178
N + YV D E +L+ S + DG + +GS D L W + +
Sbjct: 319 NGDCYVWDTLLAEVVLNLGNLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378
Query: 179 V 179
+
Sbjct: 379 I 379
Score = 111 (44.1 bits), Expect = 0.00074, P = 0.00074
Identities = 52/210 (24%), Positives = 89/210 (42%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQ 65
R +GH +V SL +P + +S S D + +W+ + ++L T AF
Sbjct: 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMTCAFAPN 119
Query: 66 GLVFAVAMEAGAIKLFDSRSY-DKG---PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
G A A +F+ S D+ P L G V ++ D ++ L+T++
Sbjct: 120 GQSVACGGLDSACSIFNLNSQADRDGNIPVSRILTG-HKGYVSSCQYVPDQETRLITSSG 178
Query: 122 NNIYVL-DAYGGEKRCGFSLE-PSPNTNTEATFT---PDGQYVVSGSGDGTLHAWNINTR 176
+ VL D G++ F E PS +T + + + VSGS D T+ W+I
Sbjct: 179 DQTCVLWDVTTGQRISIFGGEFPSGHTADVLSLSINSSNSNMFVSGSCDATVRLWDIRIA 238
Query: 177 NE-VACWNGNIGVVACLKWAPRRAMFVAAS 205
+ V ++G+ G + +K+ P F S
Sbjct: 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGS 268
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/201 (25%), Positives = 85/201 (42%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
+GH+ V+S+ +S S SLD +R+WDL + I + P ++AF
Sbjct: 61 EGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETG--KQIKSIDAGPVDAWSLAFSPDS 118
Query: 67 LVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A G + +F + K DT G + I +S DGK + + I
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDT---RGKF--ILSIAYSPDGKYLASGAIDGIIN 173
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ D G+ +LE TF+PD Q +V+ S DG + +++ N +G+
Sbjct: 174 IFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 186 IGVVACLKWAPRRAMFVAASS 206
V + + P FV++SS
Sbjct: 232 GSWVLNVAFCPDDTHFVSSSS 252
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 133 (51.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 51/201 (25%), Positives = 85/201 (42%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQG 66
+GH+ V+S+ +S S SLD +R+WDL + I + P ++AF
Sbjct: 61 EGHQLGVVSVDISHTGSIAASSSLDAHIRLWDLETG--KQIKSIDAGPVDAWSLAFSPDS 118
Query: 67 LVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A G + +F + K DT G + I +S DGK + + I
Sbjct: 119 QFLATGSHVGKVNIFGVETGKKEYSLDT---RGKF--ILSIAYSPDGKYLASGAIDGIIN 173
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ D G+ +LE TF+PD Q +V+ S DG + +++ N +G+
Sbjct: 174 IFDIATGKLL--HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH 231
Query: 186 IGVVACLKWAPRRAMFVAASS 206
V + + P FV++SS
Sbjct: 232 GSWVLNVAFCPDDTHFVSSSS 252
>UNIPROTKB|E1BDF6 [details] [associations]
symbol:E1BDF6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000346 GO:GO:0046784
GeneTree:ENSGT00700000104559 IPI:IPI00732803 OMA:LAYACDD
EMBL:DAAA02027701 EMBL:DAAA02027702 EMBL:DAAA02027703
ProteinModelPortal:E1BDF6 Ensembl:ENSBTAT00000049661 Uniprot:E1BDF6
Length = 351
Score = 134 (52.2 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 47/201 (23%), Positives = 92/201 (45%)
Query: 10 FKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQGL 67
++GH + V LC P N D F++ S D ++RIWD+R C + +G + + ++ +G
Sbjct: 95 YRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGNCSELCWEPEGQ 154
Query: 68 VFAVAMEAGAIKLFDSRSY---DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
+ + D+ Y +G F +F +++ +K+ N + L+ +
Sbjct: 155 TIDCNSKDDLLLFLDAGDYRMTGEGQF-SF-----QSQI--VKWQNQYNIVKLSNHCGWV 206
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG 184
++L+ Y E + S+ P+ F P G+Y +GS D + W+++ V C++
Sbjct: 207 HILN-YP-ELKPVQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSR 264
Query: 185 NIGVVACLKWAPRRAMFVAAS 205
V L ++ M +AS
Sbjct: 265 LDWPVRTLSFSHDGKMLASAS 285
>MGI|MGI:1924290 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0000045 "autophagic vacuole
assembly" evidence=TAS] [GO:0000421 "autophagic vacuole membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005776 "autophagic
vacuole" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006914 "autophagy" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1924290 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
CTD:55054 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8 GO:GO:0000421
GO:GO:0034045 GO:GO:0000045 InterPro:IPR013923 Pfam:PF08614
EMBL:AB087879 EMBL:AB087880 EMBL:AB087881 EMBL:AK005181
EMBL:AK030983 EMBL:AK131120 EMBL:BC049122 IPI:IPI00223832
IPI:IPI00403350 IPI:IPI00554838 IPI:IPI00554885 IPI:IPI01027707
RefSeq:NP_001192320.1 RefSeq:NP_084122.2 UniGene:Mm.272972
UniGene:Mm.456099 ProteinModelPortal:Q8C0J2 SMR:Q8C0J2
DIP:DIP-31966N IntAct:Q8C0J2 MINT:MINT-136268 STRING:Q8C0J2
PhosphoSite:Q8C0J2 REPRODUCTION-2DPAGE:Q8C0J2 PaxDb:Q8C0J2
PRIDE:Q8C0J2 Ensembl:ENSMUST00000027512 Ensembl:ENSMUST00000113186
Ensembl:ENSMUST00000113190 GeneID:77040 KEGG:mmu:77040
UCSC:uc007bxl.1 UCSC:uc007bxm.1 OMA:LETECQE NextBio:346354
Bgee:Q8C0J2 CleanEx:MM_ATG16L1 Genevestigator:Q8C0J2
GermOnline:ENSMUSG00000026289 Uniprot:Q8C0J2
Length = 607
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/199 (25%), Positives = 92/199 (46%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC-QGILRLRGRPTVA 61
D R+ GH +V+S N +SGS D ++++WDLR C + + +
Sbjct: 397 DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+Q V + + I+ +D RS + + L+G TA D+ N ++ LL+ +
Sbjct: 457 CTEQ-CVMSGHFDK-KIRFWDIRS-ESVVREMELLGKITA--LDL---NPERTELLSCSR 508
Query: 122 NNIY-VLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-RN 177
+++ V+D + FS + T F+PDG YV +GS +G+L+ W++ T +
Sbjct: 509 DDLLKVIDLRTNAVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKV 568
Query: 178 EVACWNGNIGVVACLKWAP 196
E + + + WAP
Sbjct: 569 EKVLSKQHSSSINAVAWAP 587
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 47/200 (23%), Positives = 88/200 (44%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAV 71
GH V + SP + +S S D ++R+W L+ C ++ +G +D Q F
Sbjct: 497 GHSGPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTC--LVGYKGHNYPVWDTQFSPFGY 554
Query: 72 AMEAGA----IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+G +L+ + Y P F G A+V +F + + +++ + +
Sbjct: 555 YFVSGGHDRVARLWATDHYQ--PLRIF--AGHLADVTCTRFHPNSNYVATGSSDRTVRLW 610
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G F+ P + F+P+G+++ SGS DG + W+I +A G+ G
Sbjct: 611 DVLNGNCVRIFTGHKGPIHSL--AFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTG 668
Query: 188 VVACLKWAPRRAMFVAASSV 207
+ LK++ R +A+ S+
Sbjct: 669 TIYALKFS-RDGEIIASGSI 687
>MGI|MGI:1913972 [details] [associations]
symbol:Spag16 "sperm associated antigen 16" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005929 "cilium" evidence=IEA]
[GO:0005930 "axoneme" evidence=IDA] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0030030 "cell projection organization" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IDA] [GO:0042384 "cilium
assembly" evidence=IDA] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1913972 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007283 GO:GO:0042384
GO:GO:0005874 GO:GO:0035085 GO:GO:0035086
GeneTree:ENSGT00700000104486 CTD:79582 HOVERGEN:HBG086482
OMA:EGHNHAV OrthoDB:EOG41ZF9F EMBL:AF490391 EMBL:AK014865
EMBL:AK015884 EMBL:AK016618 EMBL:AK083083 EMBL:BC120668
IPI:IPI00177216 IPI:IPI00473221 IPI:IPI00556714 IPI:IPI00556881
RefSeq:NP_001258462.1 RefSeq:NP_080004.1 RefSeq:NP_083436.2
UniGene:Mm.440554 ProteinModelPortal:Q8K450 SMR:Q8K450
DIP:DIP-59752N STRING:Q8K450 PhosphoSite:Q8K450 PaxDb:Q8K450
PRIDE:Q8K450 Ensembl:ENSMUST00000065425 Ensembl:ENSMUST00000113940
GeneID:66722 KEGG:mmu:66722 UCSC:uc007bjg.1 UCSC:uc007bjh.1
UCSC:uc007bji.1 HOGENOM:HOG000256703 InParanoid:Q0VBE7
NextBio:322475 Bgee:Q8K450 CleanEx:MM_SPAG16 Genevestigator:Q8K450
GermOnline:ENSMUSG00000053153 Uniprot:Q8K450
Length = 639
Score = 136 (52.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/169 (25%), Positives = 71/169 (42%)
Query: 8 RY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL--RLRGRPTVAFDQ 64
RY GH + V S+ P ++ ++ S D ++ +WD R C+ L + F
Sbjct: 479 RYTLYGHTDSVNSIEFFPFSNILLTASADKTLSVWDARTGKCEQSLYGHMHSVNDATFTP 538
Query: 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
+G + A G KL+D R P + VG + ++ F G+ + + N I
Sbjct: 539 RGHIIASCDARGVTKLWDFRKLI--PIVSIDVGPSSGN--EVNFDQSGRVLAQASANGII 594
Query: 125 YVLDAYGGE--KRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
++LD G+ K G E F+ G+ + SG DGT+ W
Sbjct: 595 HLLDLKSGQIHKLVGHESEVH-----SVVFSHLGENLYSGGSDGTIRLW 638
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 136 (52.9 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 51/189 (26%), Positives = 80/189 (42%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH + SL +S + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLE--AAKILRTLLGHKANICSLDFHPYGS 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A IKL+D R KG F T V ++FS DGK + ++ + +
Sbjct: 119 FVASGSLDTDIKLWDVRR--KGCI--FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G+ F+ P E F P + SGS D T+ W++ + V+C
Sbjct: 175 DLTAGKVMFEFTGHSGPVNVVE--FHPSEYLLASGSSDRTIRFWDLEKFHVVSCIEEEAT 232
Query: 188 VVACLKWAP 196
V C+ + P
Sbjct: 233 PVRCILFNP 241
>UNIPROTKB|E1C9D6 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:AADN02061119 IPI:IPI00578429 RefSeq:XP_425517.3
ProteinModelPortal:E1C9D6 PRIDE:E1C9D6 Ensembl:ENSGALT00000023410
GeneID:427945 KEGG:gga:427945 Uniprot:E1C9D6
Length = 340
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 46/168 (27%), Positives = 70/168 (41%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP F+SG+ D + ++WD+R C+ + F G
Sbjct: 180 FLGHTGDCMSLAVSPDFKLFISGACDATAKLWDVREGTCRQTFSGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIK---FSNDGKSMLLTTTNNNI 124
+ +LFD R+ D+ +V + +C I FS G+ +L + N
Sbjct: 240 AICTGSDDATCRLFDLRA-DQ----ELIVYSHESIICGITSVAFSRSGRLLLAGYDDFNC 294
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+ D+ E R G L N + T DG V +GS D L WN
Sbjct: 295 NIWDSLKAE-RVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 45/165 (27%), Positives = 69/165 (41%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ + +LFD R+ D+ T+ + + FS G+ + + N V
Sbjct: 240 AICTGSDDASCRLFDLRA-DQ-ELTTYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
D+ E R G +L N + T DG V +GS D L WN
Sbjct: 298 DSMKCE-RVG-TLSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 48/199 (24%), Positives = 79/199 (39%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR---VNACQGILRLRGRPTVAFDQQGL 67
K HKER + SPV+D + S D + ++W + +G L R VAF G
Sbjct: 295 KDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLAR--VAFHPSGK 352
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+L+D + G + L G + V I F DG ++ V
Sbjct: 353 YLGTTSYDKTWRLWDINT---GA-ELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVW 408
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D G F P + F+P+G ++ SG D W++ R + +
Sbjct: 409 DLRTGRSILVFQGHIKPVFSVN--FSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHAN 466
Query: 188 VVACLKWAPRRAMFVAASS 206
+V+ +K+ P+ F+A +S
Sbjct: 467 LVSQVKYEPQEGYFLATAS 485
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 133 (51.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/182 (23%), Positives = 79/182 (43%)
Query: 7 LRYFKGHKERVISLCMS-PVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV--AFD 63
L +GH+ V ++ + P D +GS D + ++W + C R V +F+
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
Q + A KL+D +S + + F + G +AE+ + F+ G ++ + ++
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQSGE----EVFTLTGHSAEIISLSFNTSGNRIITGSFDHT 242
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
+ V +A G K ++L + A F D +++GS D T W+ VA
Sbjct: 243 VTVWEADTGRKV--YTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLT 300
Query: 184 GN 185
G+
Sbjct: 301 GH 302
Score = 126 (49.4 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 41/169 (24%), Positives = 73/169 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR----PTVAFDQQ-G 66
GH +ISL + + ++GS DH+V +W+ + + + L G + F+
Sbjct: 217 GHSAEIISLSFNTSGNRIITGSFDHTVTVWE--ADTGRKVYTLIGHCAEISSAVFNWDCS 274
Query: 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYV 126
L+ +M+ KL+D+ + G L G D E+ D F GK + + + +
Sbjct: 275 LILTGSMDK-TCKLWDAVN---GKCVATLTGHDD-EILDSCFDYTGKLIATASADGTARI 329
Query: 127 LDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
A + C LE ++ +F P G +++GS D T W+ T
Sbjct: 330 FSA--ATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDAQT 376
Score = 125 (49.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 41/201 (20%), Positives = 89/201 (44%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQ 65
F+GH ++ L +P + +GS+D + ++WD++ + + L G +++F+
Sbjct: 173 FRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSG--EEVFTLTGHSAEIISLSFNTS 230
Query: 66 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
G + ++++ D G + + G AE+ F+ D +L + +
Sbjct: 231 GNRIITGSFDHTVTVWEA---DTGR-KVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCK 286
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
+ DA G +C +L + ++ F G+ + + S DGT ++ TR V G+
Sbjct: 287 LWDAVNG--KCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGH 344
Query: 186 IGVVACLKWAPRRAMFVAASS 206
G ++ + + P+ + SS
Sbjct: 345 EGEISKISFNPQGNRLLTGSS 365
Score = 113 (44.8 bits), Expect = 0.00050, P = 0.00050
Identities = 38/162 (23%), Positives = 66/162 (40%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV--AFDQQGLVF 69
GH + S + ++GS+D + ++WD C L + FD G +
Sbjct: 259 GHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLI 318
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
A A G ++F + + + T L G + E+ I F+ G +L +++ + DA
Sbjct: 319 ATASADGTARIFSAATRE---CVTKLEGHE-GEISKISFNPQGNRLLTGSSDKTARIWDA 374
Query: 130 YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
G+ C LE + F G +++GS D T W
Sbjct: 375 QTGQ--CLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 132 (51.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 50/217 (23%), Positives = 96/217 (44%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 107 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 164
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK--KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 220 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASSVLSFWIP 213
+ GN+ ++ C W+P + +AA S SF P
Sbjct: 278 FQGNVHNFEKNLLRC-SWSPDGSK-IAAGSADSFLYP 312
>UNIPROTKB|E1BGS8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:DAAA02009276 IPI:IPI00699437
ProteinModelPortal:E1BGS8 Ensembl:ENSBTAT00000005131 Uniprot:E1BGS8
Length = 623
Score = 135 (52.6 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 50/199 (25%), Positives = 93/199 (46%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC-QGILRLRGRPTVA 61
D R+ GH +V+S N +SGS D ++++WDLR C + + +
Sbjct: 413 DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 472
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+Q V + + I+ +D RS + + L+G TA D+ N ++ LL+ +
Sbjct: 473 CTEQ-CVMSGHFDK-KIRFWDIRS-ESIVREMELLGKITA--LDL---NPERTELLSCSR 524
Query: 122 NNIY-VLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI-NTRN 177
+++ ++D R FS + T A F+PDG YV +G+ +G+L+ WN+ + +
Sbjct: 525 DDLLKIIDLRINAVRQTFSAPGFKCGSDWTRAVFSPDGSYVAAGAAEGSLYIWNVLSGKV 584
Query: 178 EVACWNGNIGVVACLKWAP 196
E + + + W+P
Sbjct: 585 EKVLSKHHSSSINAVAWSP 603
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 131 (51.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/165 (27%), Positives = 68/165 (41%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FVGHTGDCMSLAVSPDFRLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ + +LFD R+ D+ T+ + + FS G+ + + N V
Sbjct: 240 AICTGSDDASCRLFDLRA-DQ-ELTTYAHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
D+ E R G L N + T DG V +GS D L WN
Sbjct: 298 DSMKCE-RVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>UNIPROTKB|P16520 [details] [associations]
symbol:GNB3 "Guanine nucleotide-binding protein
G(I)/G(S)/G(T) subunit beta-3" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0003924 "GTPase activity" evidence=TAS] [GO:0008217 "regulation
of blood pressure" evidence=TAS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0006112 "energy reserve metabolic
process" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0071377 "cellular response to glucagon stimulus"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
Reactome:REACT_13685 Reactome:REACT_604 Reactome:REACT_111217
Reactome:REACT_15518 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005886
Reactome:REACT_111102 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0007268 GO:GO:0003924
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0006112 GO:GO:0004871 GO:GO:0008217 GO:GO:0071377
Pathway_Interaction_DB:cone_pathway EMBL:U47924 PRINTS:PR00319
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 HPA:HPA040736 CTD:2784 KO:K07825 EMBL:M31328
EMBL:U47930 EMBL:Y12050 EMBL:Y12051 EMBL:Y12052 EMBL:Y12053
EMBL:Y12054 EMBL:Y12055 EMBL:Y12056 EMBL:Y12057 EMBL:Y12058
EMBL:AF501884 EMBL:BT009800 EMBL:AY631872 EMBL:BC000115
EMBL:BC002454 IPI:IPI00029143 PIR:A35096 RefSeq:NP_002066.1
UniGene:Hs.631657 ProteinModelPortal:P16520 SMR:P16520 DIP:DIP-601N
IntAct:P16520 STRING:P16520 PhosphoSite:P16520 DMDM:121011
OGP:P16520 PaxDb:P16520 PRIDE:P16520 DNASU:2784
Ensembl:ENST00000229264 GeneID:2784 KEGG:hsa:2784 UCSC:uc001qrc.3
GeneCards:GC12P007021 HGNC:HGNC:4400 HPA:HPA005645 MIM:139130
neXtProt:NX_P16520 PharmGKB:PA176 InParanoid:P16520 OMA:NMCSIYS
OrthoDB:EOG4J118C PhylomeDB:P16520 ChiTaRS:GNB3 GenomeRNAi:2784
NextBio:10967 ArrayExpress:P16520 Bgee:P16520 CleanEx:HS_GNB3
Genevestigator:P16520 GermOnline:ENSG00000111664 Uniprot:P16520
Length = 340
Score = 131 (51.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 45/165 (27%), Positives = 68/165 (41%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP + F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ + +LFD R+ D+ F + + FS G+ + + N V
Sbjct: 240 AICTGSDDASCRLFDLRA-DQ-ELICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
D+ E R G L N + T DG V +GS D L WN
Sbjct: 298 DSMKSE-RVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 131 (51.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 56/210 (26%), Positives = 92/210 (43%)
Query: 8 RYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLRGRPT-VAFDQQ 65
R FKGH V S+ S + SGS D +++IWD R L + T V F
Sbjct: 134 RRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQVTAVCFGDT 193
Query: 66 G-LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVG-GDTAEVCDIKFSNDGKSMLLTTTNNN 123
G V + ++ +K++D R K L G DT + + S +G +L +N
Sbjct: 194 GEQVISGGID-NEVKIWDIR---KQAVLHHLRGHSDT--ITGMSLSPEGDFILTNAMDNT 247
Query: 124 IYVLDA--YGGEKRCGFSLEPSPNTNTE-----ATFTPDGQYVVSGSGDGTLHAWNINTR 176
+ V D Y +RC + N E ++P + SGS D ++ W++NTR
Sbjct: 248 LRVWDVRPYAPGERC-VKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTR 306
Query: 177 NEVACWNGNIGVVACLKWAPRRAMFVAASS 206
+ G+ G V + ++P+ + ++ SS
Sbjct: 307 RILYKLPGHNGSVNAVDFSPKEPLILSGSS 336
>UNIPROTKB|G4MYQ9 [details] [associations]
symbol:MGG_08133 "Pre-mRNA-processing factor 17"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001232 KO:K12816 RefSeq:XP_003715095.1
ProteinModelPortal:G4MYQ9 EnsemblFungi:MGG_08133T0 GeneID:2678328
KEGG:mgr:MGG_08133 Uniprot:G4MYQ9
Length = 542
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 45/183 (24%), Positives = 75/183 (40%)
Query: 1 MYDNR-ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP- 58
+Y R +LR + GH + + + D F+S S D +++WD C P
Sbjct: 280 VYHQRELLRTYSGHSKSLSDTTFNTHGDKFLSASFDRMMKLWDTETGKCIAKFTTGKTPH 339
Query: 59 TVAFD---QQGLVFAVAMEAGAIKLFDSRSYDKG--PFDTFLVGGDTAEVCDIKFSNDGK 113
V F+ + G F M I FD+R+ ++ +D L +T CD DG+
Sbjct: 340 VVRFNPTSELGHEFVAGMSDNKIVQFDTRAGNETVQEYDHHLGPVNTITFCD-----DGR 394
Query: 114 SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
+ T+ + + + YG + EP T A P G+YV S D + ++
Sbjct: 395 RFMTTSDDRTLRAWE-YGFGVPIKYIAEPYLFAMTRAATHPSGKYVAYQSSDNQIVVYSS 453
Query: 174 NTR 176
N +
Sbjct: 454 NDK 456
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 130 (50.8 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 52/217 (23%), Positives = 93/217 (42%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGHK ++ L + +S S D +VR WD+ + I ++ + ++G
Sbjct: 93 KGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETG--KQIKKMAEHSSFVNSCCPTRRG 150
Query: 67 LVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
++ + G KL+D R +G TF D ++ + FS+ + +N++
Sbjct: 151 PPLIISGSDDGTAKLWDMRQ--RGAIQTF---PDKYQITAVSFSDAADKIFTGGVDNDVK 205
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT---RNE-VAC 181
V D GE +LE +T T + +PDG Y+++ D L W++ +N V
Sbjct: 206 VWDLRKGEAT--MTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKI 263
Query: 182 WNG---NI--GVVACLKWAPRRAMFVAASS--VLSFW 211
+ G N ++ C W+P A SS ++ W
Sbjct: 264 FEGHQHNFEKNLLKC-SWSPDGTKVTAGSSDRMVHIW 299
Score = 124 (48.7 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/203 (25%), Positives = 86/203 (42%)
Query: 13 HKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVN-ACQGILRLRGRPTVAF-DQQGLVF 69
H V S C + + SGS D + ++WD+R A Q V+F D +F
Sbjct: 137 HSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIF 196
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
++ +K++D R KG T + G + + S DG +L +N + V D
Sbjct: 197 TGGVD-NDVKVWDLR---KGEA-TMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Query: 130 --YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
Y + RC E + N + +++PDG V +GS D +H W+ +R +
Sbjct: 252 RPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLP 311
Query: 184 GNIGVVACLKWAPRRAMFVAASS 206
G+ G V + P + + SS
Sbjct: 312 GHTGSVNECVFHPTEPIIGSCSS 334
>RGD|1310362 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
[GO:0004857 "enzyme inhibitor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0006006 "glucose metabolic process"
evidence=IEA;ISO] [GO:0008361 "regulation of cell size"
evidence=IEA;ISO] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA;ISO] [GO:0035264 "multicellular organism
growth" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] [GO:0043086 "negative regulation of catalytic
activity" evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0055082 "cellular
chemical homeostasis" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50293
PROSITE:PS50294 SMART:SM00320 RGD:1310362 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0032869
GO:GO:0004857 GO:GO:0001701 GO:GO:0006006 GO:GO:0008361
GO:GO:0000122 GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000062951
EMBL:CH473968 CTD:23038 KO:K11807 OMA:HRYCGHC OrthoDB:EOG4CRKZJ
GO:GO:0055082 IPI:IPI00366746 RefSeq:NP_001101378.1
UniGene:Rn.16646 Ensembl:ENSRNOT00000011311 GeneID:313020
KEGG:rno:313020 UCSC:RGD:1310362 NextBio:665469 Uniprot:D4A7Z0
Length = 676
Score = 109 (43.4 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 31/80 (38%), Positives = 39/80 (48%)
Query: 145 NTNT---EATFT-PDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM 200
NT T EA F + QY+VSGS DG+ W T N V G+ +V CL+ P
Sbjct: 534 NTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYC- 592
Query: 201 FVAASS---VLSFWIPNPSS 217
F+A S V+ W P P S
Sbjct: 593 FLATSGIDPVVRLWNPRPES 612
Score = 53 (23.7 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 7 LRYFKGHKERVISLCMSPV-NDSFMSGSLDHSVRIWDLRVNA 47
+ F H RV + +P+ ++F S + D +R +DLR N+
Sbjct: 127 IHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENS 168
Score = 50 (22.7 bits), Expect = 3.7e-06, Sum P(3) = 3.7e-06
Identities = 23/81 (28%), Positives = 32/81 (39%)
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML---LTTT 120
Q FA AI+L+ S++ K P + L G A K+ D L L
Sbjct: 367 QANEAFACQQWTQAIQLY-SKAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 425
Query: 121 NNNIYVLDAYGGEKRCGFSLE 141
+ N L A+ RC F L+
Sbjct: 426 SLNPCHLKAHFRLARCLFELK 446
Score = 42 (19.8 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWD 42
+GH V L + D SGS D +WD
Sbjct: 44 QGHSGCVNCLEWNEKGDLLASGSDDQHTIVWD 75
Score = 37 (18.1 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 106 IKFSNDGKSMLLTTTNNNIYVLD 128
+ FS +G +L+ +Y+ D
Sbjct: 274 VTFSPNGTELLVNMGGEQVYLFD 296
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 131 (51.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 43/154 (27%), Positives = 73/154 (47%)
Query: 60 VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTT 119
V F + A E IK++D Y+ G + L G T V DI GK ++ +
Sbjct: 112 VIFHPLWTIMASCSEDATIKVWD---YETGQLERTLKG-HTDAVNDIAIDAAGKQLVSCS 167
Query: 120 TNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV 179
++ +I + D +G C SL+ +T + TF P G +V+S S D T+ W+I+T V
Sbjct: 168 SDLSIKLWD-FGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCV 226
Query: 180 ACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
+ G+ V ++ + +F +AS ++ W
Sbjct: 227 YTFRGHNDWVRMIRISNDGTLFASASLDQTVTVW 260
>UNIPROTKB|F1SM42 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000421 "autophagic vacuole membrane" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:FP102656 Ensembl:ENSSSCT00000017750 Uniprot:F1SM42
Length = 596
Score = 133 (51.9 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 48/203 (23%), Positives = 91/203 (44%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC-QGILRLRGRPTVA 61
D R+ GH +V+S N +SGS D ++++WDLR C + + +
Sbjct: 397 DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF--LVGGDTAEVCDIKFSNDGKSMLLTT 119
+Q V + + I+ +D R Y+ + L+G TA +F+ + +L +
Sbjct: 457 CTEQ-CVMSGHFDK-KIRFWDIR-YNTRSLVSLGQLLGKQTAS----RFNPERTELLSCS 509
Query: 120 TNNNIYVLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI-NTR 176
++ + ++D R FS + T F+PDG YV +GS +G+L+ W++ + +
Sbjct: 510 RDDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLSGK 569
Query: 177 NEVACWNGNIGVVACLKWAPRRA 199
E + + + W+P A
Sbjct: 570 VEKVLSKHHSSPINAVAWSPSGA 592
>RGD|1311400 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1311400 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GeneTree:ENSGT00700000104505 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013923 Pfam:PF08614 CTD:89849 OrthoDB:EOG44F68R
IPI:IPI00196362 RefSeq:NP_001178489.1 UniGene:Rn.104199
ProteinModelPortal:D4A9M7 Ensembl:ENSRNOT00000026286 GeneID:308865
KEGG:rno:308865 UCSC:RGD:1311400 NextBio:659687 Uniprot:D4A9M7
Length = 623
Score = 133 (51.9 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 46/188 (24%), Positives = 81/188 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVF 69
GHK++V + ++GS D +V+ WDL C + + V D +
Sbjct: 424 GHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDH---II 480
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
I+ +DSR GP ++ V + S+D +L + +N + V+D
Sbjct: 481 ISGHNDQKIRFWDSR----GPHCIQVIPVQ-GRVTSLNLSHDQLHLLSCSRDNTLKVIDL 535
Query: 130 YGGEKRCGFSLEPSPNTN--TEATFTPDGQYVVSGSGDGTLHAWNINT-RNEVACWNGNI 186
R F + ++ T+A F+PD Y + GS +GTL+ W++NT + E + +
Sbjct: 536 RISNIRQVFRADGFKCSSDWTKAVFSPDRSYALVGSSNGTLYIWDVNTGKLETSLQGPHC 595
Query: 187 GVVACLKW 194
V + W
Sbjct: 596 TAVNAVAW 603
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 129 (50.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 51/211 (24%), Positives = 87/211 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR--VNACQGILRLRGRPTVAF 62
R +R GH V + +S +SGS D ++R+WDL V+ Q I + +VAF
Sbjct: 60 RPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF 119
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN- 121
+IKL+++ + K T T V ++FS + ++ +
Sbjct: 120 SADNRQIVSGSRDKSIKLWNTLAQCKY---TITDDCHTDWVSTVRFSPSNRDPVIVSAGW 176
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + + G + + + NT T +PDG SG DG W++N +
Sbjct: 177 DKVVKVWNLGNCRLKTNHIGHTGYVNT-VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 235
Query: 182 WNGNIGVVACLKWAPRRAMFVAA-SSVLSFW 211
GN V+ + ++P R AA S + W
Sbjct: 236 LPGN-DVINAMSFSPNRYWLCAAVGSSIKIW 265
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 129 (50.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 51/211 (24%), Positives = 87/211 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR--VNACQGILRLRGRPTVAF 62
R +R GH V + +S +SGS D ++R+WDL V+ Q I + +VAF
Sbjct: 60 RPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAF 119
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN- 121
+IKL+++ + K T T V ++FS + ++ +
Sbjct: 120 SADNRQIVSGSRDKSIKLWNTLAQCKY---TITDDCHTDWVSTVRFSPSNRDPVIVSAGW 176
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC 181
+ + + G + + + NT T +PDG SG DG W++N +
Sbjct: 177 DKVVKVWNLGNCRLKTNHIGHTGYVNT-VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT 235
Query: 182 WNGNIGVVACLKWAPRRAMFVAA-SSVLSFW 211
GN V+ + ++P R AA S + W
Sbjct: 236 LPGN-DVINAMSFSPNRYWLCAAVGSSIKIW 265
>TAIR|locus:2089179 [details] [associations]
symbol:AT3G27640 "AT3G27640" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0006261 "DNA-dependent DNA
replication" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0080008 KO:K11790 EMBL:AY035167 EMBL:AY063003 IPI:IPI00539568
RefSeq:NP_566822.1 UniGene:At.19178 ProteinModelPortal:Q94C55
SMR:Q94C55 PRIDE:Q94C55 EnsemblPlants:AT3G27640.1 GeneID:822386
KEGG:ath:AT3G27640 TAIR:At3g27640 InParanoid:Q94C55 OMA:NRIYLYN
PhylomeDB:Q94C55 ProtClustDB:CLSN2688846 ArrayExpress:Q94C55
Genevestigator:Q94C55 Uniprot:Q94C55
Length = 535
Score = 99 (39.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 37/141 (26%), Positives = 57/141 (40%)
Query: 77 AIKLFDSRSYDKGPFDTFLVGGDTAEVCD------IKFSNDGKSMLLTTT--NNNIYVLD 128
A+K +D R K PF D + + S D LT + +N IY+ +
Sbjct: 262 ALKFWDIRKL-KAPFAQASPQSDPTNTKEKRSHGIVSLSQDSSGTYLTASCKDNRIYLYN 320
Query: 129 AYGGEKRC--GFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN-EVACWNGN 185
+K FS + +PDG+YV+SGS DG + W +N + G+
Sbjct: 321 TLRLDKGPVQSFSGCRIDSFFVRTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGH 380
Query: 186 IGVVACLKWAPRRAMFVAASS 206
V + W+P VA +S
Sbjct: 381 DFEVTAVDWSPSEIGKVATAS 401
Score = 76 (31.8 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 3 DNRILRYFKGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLR 44
+N+ GH V S+C P N D +SGS D +WDLR
Sbjct: 159 ENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLR 201
Score = 62 (26.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/40 (22%), Positives = 20/40 (50%)
Query: 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGIL 52
H + + + ++ S D ++++WD+ N C G+L
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVL 166
>MGI|MGI:2685541 [details] [associations]
symbol:Wdtc1 "WD and tetratricopeptide repeats 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0004857 "enzyme inhibitor activity" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006006 "glucose metabolic process" evidence=IMP] [GO:0008361
"regulation of cell size" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042393 "histone
binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0043086 "negative regulation of catalytic
activity" evidence=IDA] [GO:0045717 "negative regulation of fatty
acid biosynthetic process" evidence=IMP;IDA] [GO:0055082 "cellular
chemical homeostasis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50005 PROSITE:PS50082
PROSITE:PS50293 PROSITE:PS50294 SMART:SM00320 MGI:MGI:2685541
GO:GO:0005829 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0032869 GO:GO:0004857 eggNOG:COG2319
GO:GO:0001701 GO:GO:0006006 GO:GO:0008361 GO:GO:0000122
GO:GO:0045717 Gene3D:1.25.40.10 GO:GO:0035264 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00530000062951 CTD:23038
HOGENOM:HOG000231334 HOVERGEN:HBG059105 KO:K11807 OMA:HRYCGHC
OrthoDB:EOG4CRKZJ ChiTaRS:WDTC1 GO:GO:0055082 EMBL:BC048824
EMBL:BC057107 IPI:IPI00108450 RefSeq:NP_955010.1 UniGene:Mm.226576
ProteinModelPortal:Q80ZK9 SMR:Q80ZK9 STRING:Q80ZK9
PhosphoSite:Q80ZK9 PaxDb:Q80ZK9 PRIDE:Q80ZK9
Ensembl:ENSMUST00000043305 GeneID:230796 KEGG:mmu:230796
InParanoid:Q80ZK9 NextBio:380168 Bgee:Q80ZK9 CleanEx:MM_WDTC1
Genevestigator:Q80ZK9 GermOnline:ENSMUSG00000037622 Uniprot:Q80ZK9
Length = 677
Score = 109 (43.4 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 31/80 (38%), Positives = 39/80 (48%)
Query: 145 NTNT---EATFT-PDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAM 200
NT T EA F + QY+VSGS DG+ W T N V G+ +V CL+ P
Sbjct: 535 NTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYC- 593
Query: 201 FVAASS---VLSFWIPNPSS 217
F+A S V+ W P P S
Sbjct: 594 FLATSGIDPVVRLWNPRPES 613
Score = 53 (23.7 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 7 LRYFKGHKERVISLCMSPV-NDSFMSGSLDHSVRIWDLRVNA 47
+ F H RV + +P+ ++F S + D +R +DLR N+
Sbjct: 127 IHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENS 168
Score = 49 (22.3 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 23/81 (28%), Positives = 32/81 (39%)
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML---LTTT 120
Q FA AI+L+ S++ K P + L G A K+ D L L
Sbjct: 367 QANEAFACQQWTQAIQLY-SQAVQKAPHNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAI 425
Query: 121 NNNIYVLDAYGGEKRCGFSLE 141
+ N L A+ RC F L+
Sbjct: 426 SLNPCHLKAHFRLARCLFELK 446
Score = 42 (19.8 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWD 42
+GH V L + D SGS D +WD
Sbjct: 44 QGHSGCVNCLEWNEKGDLLASGSDDQHTIVWD 75
Score = 37 (18.1 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 106 IKFSNDGKSMLLTTTNNNIYVLD 128
+ FS +G +L+ +Y+ D
Sbjct: 274 VTFSPNGTELLVNMGGEQVYLFD 296
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 121 (47.7 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 28/82 (34%), Positives = 39/82 (47%)
Query: 135 RCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKW 194
RC S+ F+PDG ++ SGSGD T+ W++NT G+ V C+ W
Sbjct: 110 RCTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSW 169
Query: 195 AP---RRAMFVAASSVLSFWIP 213
AP R A A S++ W P
Sbjct: 170 APDGKRLASGCKAGSII-IWDP 190
Score = 89 (36.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 29/111 (26%), Positives = 48/111 (43%)
Query: 103 VCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSG 162
V D+K+S D K + + + ++ + A G+ F T A ++ D + +VSG
Sbjct: 378 VNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQA-VYTVA-WSADSRLIVSG 435
Query: 163 SGDGTLHAWNINTRNEVACWNGNIGVVACLKWAP--RRAMFVAASSVLSFW 211
S D TL W++ T+ G+ V + WAP R V+ W
Sbjct: 436 SKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 86 (35.3 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 28/83 (33%), Positives = 39/83 (46%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA----CQGILRLRGRPTVAFDQQGL 67
GH E V+SL SP SGS D +VR+WDL C G + V++ G
Sbjct: 117 GHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTG--HKQWVLCVSWAPDGK 174
Query: 68 VFAVAMEAGAIKLFDSRS-YDKG 89
A +AG+I ++D + KG
Sbjct: 175 RLASGCKAGSIIIWDPETGQQKG 197
Score = 86 (35.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/101 (19%), Positives = 46/101 (45%)
Query: 113 KSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
+S++ + +N +Y+ + +C + N + ++PD + + S S D ++ W
Sbjct: 346 ESLVSCSDDNTLYLWR--NNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWR 403
Query: 173 INTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLSFW 211
+ +A + G++ V + W+ + V+ S S L W
Sbjct: 404 ASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVW 444
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 93 (37.8 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 152 FTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SVLS 209
F+PDG+++ S S D ++ WN T V + G++G V + W+ + ++ S S L
Sbjct: 368 FSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLK 427
Query: 210 FW 211
W
Sbjct: 428 IW 429
Score = 81 (33.6 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDL 43
NR + GH E V+ + SP SGS D +VR+WDL
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 79 (32.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 36/149 (24%), Positives = 65/149 (43%)
Query: 27 DSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT----VAFDQQGLVFAVAMEAGAIKLFD 82
+ +SGS D ++ +W+ V+ Q RL G V F G A A +++L++
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSK-QPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Query: 83 SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEP 142
+ G F T + G V + +S D + +L + ++ + + + K+ L
Sbjct: 389 GIT---GQFVT-VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIR--TKKLKQDLPG 442
Query: 143 SPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
+ ++PDG+ VVSG D L W
Sbjct: 443 HADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 62 (26.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 20/81 (24%), Positives = 40/81 (49%)
Query: 12 GHKERVISLCMSPVNDS-----FMSGSLDHSVRIWDLRVNACQGILRLRGRPT----VAF 62
GHK+ + + PV+ S F++ S D RIWD+ + + I+ L G V +
Sbjct: 192 GHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLK--KSIICLSGHTLAVTCVKW 249
Query: 63 DQQGLVFAVAMEAGAIKLFDS 83
G+++ + + IK++++
Sbjct: 250 GGDGIIYTGSQDC-TIKMWET 269
Score = 60 (26.2 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG 50
+Y L KGHK V+++ SP +SGS + W+ + +G
Sbjct: 138 LYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEG 187
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 129 (50.5 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 48/199 (24%), Positives = 78/199 (39%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GHK+ V + SP SGS D +VRIW V + R +V F G
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ 78
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
F A + +K++ + + F F + V KFS DG+ ++ + + + +
Sbjct: 79 SFVTASDDKTVKVWATH---RQKF-LFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLW 134
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D + C S T F P G + + D T+ W++ T + + +
Sbjct: 135 DK--SSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSA 192
Query: 188 VVACLKWAPRRAMFVAASS 206
V L + P + ASS
Sbjct: 193 AVNGLSFHPSGNYLITASS 211
>UNIPROTKB|Q5ZME8 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9031 "Gallus gallus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OMA:NGHWDTV OrthoDB:EOG49ZXP0
EMBL:AJ719436 IPI:IPI00571757 RefSeq:NP_001007980.1
UniGene:Gga.5532 ProteinModelPortal:Q5ZME8 PRIDE:Q5ZME8
Ensembl:ENSGALT00000003135 GeneID:427377 KEGG:gga:427377
InParanoid:Q5ZME8 NextBio:20828644 Uniprot:Q5ZME8
Length = 513
Score = 131 (51.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 47/185 (25%), Positives = 76/185 (41%)
Query: 2 YDNRILRYFK-GHKERVISLCMSPVNDSFMSGSLDHSVRIW---------DLRVNACQGI 51
+ ++ R+ K G K V SP ++GS+D + +W DL+ A
Sbjct: 201 FPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNF 260
Query: 52 LRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 110
+ + + F + + A + G IK++ +S F C + FS
Sbjct: 261 MMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQC--LRRFERAHSKGVTC-LSFSK 317
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170
D +L + + I + G+ F S N EATFT DG Y++S S DGT+
Sbjct: 318 DSSQILSASFDQTIRIHGLKSGKTLKEFRGHSS-FVN-EATFTQDGHYIISASSDGTVKV 375
Query: 171 WNINT 175
WN+ T
Sbjct: 376 WNVKT 380
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 138 (53.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 58/230 (25%), Positives = 101/230 (43%)
Query: 7 LRYFKGHKERVISLC-MSPV-NDSFMSGSLDHSVRIWDLR-VNACQGILRLRGRP--TVA 61
+ FK H R ++ C SP N+ MS + D S+ I++ N + +P +
Sbjct: 1599 IHQFKDHS-RAVNYCEFSPTANNLLMSCAWDSSIIIFNTSDKNIFRNFRSAHSKPVNSCC 1657
Query: 62 FDQQGLVFAVAMEAGAIKL---FDSRSYD--KGPFDTFLVGGDTAEVCDIKFSNDGKSML 116
+ G + A + G IK+ FD+ + D K D L G + + C KFS + K +L
Sbjct: 1658 WSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYG-SIKSC--KFSANSKQIL 1714
Query: 117 LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176
TT N++ + D +K S + N + + DG Y+V+GS D T W+
Sbjct: 1715 ATTMKNDVLLFDV-NSQKLISVMGNHSKSVN-HCSLSNDGNYIVTGSDDATAKVWSSTLG 1772
Query: 177 NEVA-------CWNGNIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNS 219
++ CW N CL ++P + + ++ + + + SSN+
Sbjct: 1773 TQLTNFLIPGDCW-AN-----CLAFSPTQPLLAVGATDCTVRLFDVSSNT 1816
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 42/178 (23%), Positives = 73/178 (41%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAV 71
GH + S+ SP + S S D +++W+++ + + + + + F
Sbjct: 1826 GHTRAITSITFSPSGNLIASTSEDLLIKVWNVQTHKAEYTIEKAHNDPI----NCISFNP 1881
Query: 72 AMEAGAIKLFDSRS---YDKGPFDTFL-VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
E I D S + + T L G T + +S DGK + T + + +
Sbjct: 1882 TNECELISCSDDYSTKVWSRFTTSTTLSTEGSTNTIKHCVYSPDGK--YIATVSRDCSIA 1939
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN 185
K+ F L+ + TF+PD + +VSG D L WNI T+ E+ C G+
Sbjct: 1940 VYLCSSKKLLFRLKGHTDWVNFCTFSPDSKKLVSGGWDFNLRVWNIKTQKELLCLKGH 1997
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 102 (41.0 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 30 MSGSLDHSVRIWDLRVNACQGILRLRGRPT----VAFDQQGLVFAVAMEAGAIKLFDSRS 85
+SGS D +V +W+ V I RL G V+F G FA A +IKL+D +S
Sbjct: 367 ISGSDDFTVIMWNPSVTKTS-ISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLWDGQS 425
Query: 86 YDKGPF-DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP 144
G F F G V + +S+D + ++ + ++ + + D K+ L
Sbjct: 426 ---GKFLGNFR--GHVGAVYQVCWSSDSRYLVSGSKDSTLKIWDIK--TKKMEKELPGHA 478
Query: 145 NTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
+ ++PDG V SGS D L W +
Sbjct: 479 DEVYTVDWSPDGDRVASGSKDRLLRIWTV 507
Score = 71 (30.1 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDL 43
GH E V++ SP F+S D +VRIWD+
Sbjct: 138 GHTEAVLNCAFSPDGKGFVSVGGDTTVRIWDI 169
Score = 55 (24.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 1 MYDNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIW 41
+Y + KGH V+ + SP + + ++ +RIW
Sbjct: 169 IYTSTPTHTLKGHTNWVLQVAWSPDSKKIATAGMEGDIRIW 209
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 130 (50.8 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 53/217 (24%), Positives = 99/217 (45%)
Query: 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGRPTVAFD-QQGLVF 69
H++ V + PV S SGS D +++IWD + + L+ +RG + + Q+G
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 70 AVAMEAG-AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF--SNDGKSMLLTTTNNNIYV 126
+ + IKL+D S D T L G D + V ++F SND ++ + + + +
Sbjct: 173 LASCSSDLTIKLWDP-SKDYANIRT-LSGHDHS-VSSVRFLTSNDNH-LISASRDGTLRI 228
Query: 127 LDAYGGEKRCGFSLEPSPNTNTEATFTP--DGQYVVSGSGDGTLHAWNINTRNEVACWNG 184
D G C + S + +P DG+++VSG D + W +++ A G
Sbjct: 229 WDVSTGF--C-VKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLG 285
Query: 185 NIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNSTD 221
+ + C +AP A + +++ P P+++S +
Sbjct: 286 HENFIECCVFAPP-ASYEHLATLAGLKKPPPATSSCE 321
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 130 (50.8 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 53/217 (24%), Positives = 99/217 (45%)
Query: 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGRPTVAFD-QQGLVF 69
H++ V + PV S SGS D +++IWD + + L+ +RG + + Q+G
Sbjct: 113 HRDAVTCVAFHPVFTSLASGSEDCTIKIWDWELGEIERTLKGHIRGVSGLDYGGQKGNTL 172
Query: 70 AVAMEAG-AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKF--SNDGKSMLLTTTNNNIYV 126
+ + IKL+D S D T L G D + V ++F SND ++ + + + +
Sbjct: 173 LASCSSDLTIKLWDP-SKDYANIRT-LSGHDHS-VSSVRFLTSNDNH-LISASRDGTLRI 228
Query: 127 LDAYGGEKRCGFSLEPSPNTNTEATFTP--DGQYVVSGSGDGTLHAWNINTRNEVACWNG 184
D G C + S + +P DG+++VSG D + W +++ A G
Sbjct: 229 WDVSTGF--C-VKVIKSATESWIRDVSPSFDGKWLVSGGRDQAITVWEVSSAEPKAALLG 285
Query: 185 NIGVVACLKWAPRRAMFVAASSVLSFWIPNPSSNSTD 221
+ + C +AP A + +++ P P+++S +
Sbjct: 286 HENFIECCVFAPP-ASYEHLATLAGLKKPPPATSSCE 321
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 127 (49.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 45/205 (21%), Positives = 91/205 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGI----LRLRGRPTV 60
R++R F+GH V ++ + + +S D S+R+WD R ++ + + L +V
Sbjct: 93 RVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSV 152
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
+ ++ +++ G ++ FD R + D G C I SNDG +L
Sbjct: 153 VLTKTEIIGG-SVD-GTVRTFDMR-IGREMSDNL---GQPVN-C-ISISNDGNCVLAGCL 204
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
++ + +LD GE + S + T+ T +V+ GS DG + W++ ++
Sbjct: 205 DSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLS 264
Query: 181 CWNGNIGVVACLKWAPRRAMFVAAS 205
+ + VV + + P+ + +S
Sbjct: 265 KFRAHDLVVTSVSYHPKEDCMLTSS 289
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 128 (50.1 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 44/165 (26%), Positives = 67/165 (40%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ + +LFD R+ D+ + + + FS G+ + + N V
Sbjct: 240 AICTGSDDASCRLFDLRA-DQ-ELTAYSQESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
D+ E R G L N + T DG V +GS D L WN
Sbjct: 298 DSLKCE-RVGI-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>UNIPROTKB|E2QT91 [details] [associations]
symbol:DTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint" evidence=IEA]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=IEA]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=IEA]
[GO:0019985 "translesion synthesis" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0006513 "protein
monoubiquitination" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005813 GO:GO:0009411 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004842 GO:GO:0031572
GO:GO:0006513 GO:GO:0031464 GO:GO:0031465 GO:GO:0019985
Ensembl:ENSCAFT00000019500 Uniprot:E2QT91
Length = 731
Score = 112 (44.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 40/165 (24%), Positives = 76/165 (46%)
Query: 63 DQQGLVFAVAMEAGAIKLFDSR----SYDKGPF--DTFLV-GGDTAEV--CDIKFSNDGK 113
D+ L+ A A++ G IK++D R +Y + P +FL G T ++ + + G
Sbjct: 226 DENTLISAGAVD-GVIKIWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGS 284
Query: 114 SMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNT---EATFTPDGQYVVSGSGDGTLHA 170
++ T++NIY+ + G + ++ +T +++ +PD Q++VSGS D +
Sbjct: 285 TLFANCTDDNIYMFNMTGLKTSPAVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYI 344
Query: 171 WNINTR-NEVACWNGNIGVVACLKWAPRRAMFVAASS---VLSFW 211
W ++T + G+ V + W P +A S L W
Sbjct: 345 WKVSTPWHPPTVLQGHSQEVTSVCWCPSDFTKIATCSDDNTLKIW 389
Score = 63 (27.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 11 KGHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILR 53
KGH+ + S+ S + F +G D ++ +WD R N G R
Sbjct: 137 KGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 180
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 135 (52.6 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 51/204 (25%), Positives = 88/204 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVF 69
F GH V+S+ +S +SGS++ +V++WD L +VAF
Sbjct: 812 FVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATGDLLKTLASGFAGSVAFSPDSRQI 870
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD- 128
A + G I ++D+ G L A + I FS D K ++ +T++ I D
Sbjct: 871 AAGFKDGKIFIWDAA----GTLQKTLERHPGA-IMSIAFSPDVKQLVTCSTDSTIKRWDI 925
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGV 188
GG + ++ S + T +PDG+ + SGS D T+ W+ T + G++
Sbjct: 926 TIGGVQE---AVGHSKHVTT-MVLSPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDT 981
Query: 189 VACLKWAPRRAMFVAASS-VLSFW 211
V + ++ V+ SS + W
Sbjct: 982 VEKVVFSLDNRQIVSCSSEAVKIW 1005
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 43/168 (25%), Positives = 75/168 (44%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQG-ILRLRGRP-TVAFDQQ 65
+ KGH ++ S + ++GS+D +VR+W+ + + G +VA
Sbjct: 768 KILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSD 827
Query: 66 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
G V+ A+KL+D+ + D T L G V FS D + + + I+
Sbjct: 828 GRQI-VSGSIEAVKLWDAATGDL--LKT-LASGFAGSVA---FSPDSRQIAAGFKDGKIF 880
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
+ DA G ++ +LE P F+PD + +V+ S D T+ W+I
Sbjct: 881 IWDAAGTLQK---TLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDI 925
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 127 (49.8 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 50/213 (23%), Positives = 94/213 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTV 60
+++R F+GH +V ++ + +SGS+D SVR WD R + + L G +V
Sbjct: 100 QVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSV 159
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
++ A +++ G ++ +D R G + VG C FS DG+ L+++
Sbjct: 160 KVSDHEIL-AGSVD-GRVRRYDLRM---GQVSSDYVGSPITCTC---FSRDGQCTLISSL 211
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN-INTRNEV 179
++ + +LD GE + + + + +VVS S DG + W+ + +
Sbjct: 212 DSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALAL 271
Query: 180 ACWNGNIGVVACLKWAPRR-AMFVAASSVLSFW 211
A G+ VV L + P + A + +W
Sbjct: 272 ALPVGS-NVVQSLAYHPTEPCLLTAMGGSIQYW 303
>UNIPROTKB|Q676U5 [details] [associations]
symbol:ATG16L1 "Autophagy-related protein 16-1"
species:9606 "Homo sapiens" [GO:0015031 "protein transport"
evidence=IEA] [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] [GO:0034045 "pre-autophagosomal structure membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=NAS] [GO:0000045
"autophagic vacuole assembly" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015031 EMBL:CH471063 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AY398617 EMBL:EF079889
EMBL:EF079890 EMBL:AY358182 EMBL:AK026330 EMBL:AK027854
EMBL:AK123876 EMBL:AC013726 EMBL:BC071846 EMBL:AL834526
IPI:IPI00432751 IPI:IPI00446614 IPI:IPI00470446 IPI:IPI00555905
IPI:IPI00797150 RefSeq:NP_001177195.1 RefSeq:NP_001177196.1
RefSeq:NP_060444.3 RefSeq:NP_110430.5 RefSeq:NP_942593.2
UniGene:Hs.529322 PDB:4GDK PDB:4GDL PDBsum:4GDK PDBsum:4GDL
ProteinModelPortal:Q676U5 SMR:Q676U5 DIP:DIP-27552N IntAct:Q676U5
MINT:MINT-1141152 STRING:Q676U5 PhosphoSite:Q676U5 DMDM:62510482
PaxDb:Q676U5 PRIDE:Q676U5 DNASU:55054 Ensembl:ENST00000347464
Ensembl:ENST00000373525 Ensembl:ENST00000392017
Ensembl:ENST00000392020 GeneID:55054 KEGG:hsa:55054 UCSC:uc002vty.3
UCSC:uc002vtz.3 UCSC:uc002vua.3 CTD:55054 GeneCards:GC02P234118
HGNC:HGNC:21498 HPA:HPA012577 MIM:610767 MIM:611081
neXtProt:NX_Q676U5 Orphanet:206 PharmGKB:PA134902949
HOGENOM:HOG000112569 HOVERGEN:HBG050534 OrthoDB:EOG4SXNC8
GenomeRNAi:55054 NextBio:58531 ArrayExpress:Q676U5 Bgee:Q676U5
CleanEx:HS_ATG16L1 Genevestigator:Q676U5 GermOnline:ENSG00000085978
GO:GO:0005776 GO:GO:0000421 GO:GO:0034045 GO:GO:0000045
GO:GO:0051260 InterPro:IPR013923 Pfam:PF08614 Uniprot:Q676U5
Length = 607
Score = 131 (51.2 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 50/199 (25%), Positives = 92/199 (46%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC-QGILRLRGRPTVA 61
D R+ GH +V+S N +SGS D ++++WDLR C + + +
Sbjct: 397 DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+Q V + + I+ +D RS + + L+G TA D+ N ++ LL+ +
Sbjct: 457 CTEQ-CVMSGHFDK-KIRFWDIRS-ESIVREMELLGKITA--LDL---NPERTELLSCSR 508
Query: 122 NNIY-VLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT-RN 177
+++ V+D + FS + T F+PDG YV +GS +G+L+ W++ T +
Sbjct: 509 DDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKV 568
Query: 178 EVACWNGNIGVVACLKWAP 196
E + + + W+P
Sbjct: 569 EKVLSKQHSSSINAVAWSP 587
>UNIPROTKB|Q8NAA4 [details] [associations]
symbol:ATG16L2 "Autophagy-related protein 16-2"
species:9606 "Homo sapiens" [GO:0006914 "autophagy" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000112569
HOVERGEN:HBG050534 InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914
EMBL:AK093017 EMBL:AK090597 EMBL:CH471076 EMBL:BC036713
EMBL:BC137489 EMBL:BC137490 EMBL:BC142718 EMBL:BC146660
EMBL:AL832974 IPI:IPI00300536 IPI:IPI00892538 IPI:IPI00892678
RefSeq:NP_203746.1 UniGene:Hs.653186 ProteinModelPortal:Q8NAA4
SMR:Q8NAA4 IntAct:Q8NAA4 PhosphoSite:Q8NAA4 DMDM:189027648
PRIDE:Q8NAA4 Ensembl:ENST00000321297 GeneID:89849 KEGG:hsa:89849
UCSC:uc001otd.3 CTD:89849 GeneCards:GC11P072525 H-InvDB:HIX0009913
HGNC:HGNC:25464 HPA:HPA045444 neXtProt:NX_Q8NAA4
PharmGKB:PA142672575 InParanoid:Q8NAA4 OrthoDB:EOG44F68R
PhylomeDB:Q8NAA4 GenomeRNAi:89849 NextBio:76342 ArrayExpress:Q8NAA4
Bgee:Q8NAA4 CleanEx:HS_ATG16L2 Genevestigator:Q8NAA4 Uniprot:Q8NAA4
Length = 619
Score = 131 (51.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 43/168 (25%), Positives = 74/168 (44%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVF 69
GHK++V + ++GS D +V+ WDL C + + V D +
Sbjct: 420 GHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDH---II 476
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
I+ +DSR GP T ++ V + S+D +L + +N + V+D
Sbjct: 477 ISGHNDQKIRFWDSR----GPHCTQVIPVQ-GRVTSLSLSHDQLHLLSCSRDNTLKVIDL 531
Query: 130 YGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
R F + + T+A F+PD Y ++GS DG L+ W+++T
Sbjct: 532 RVSNIRQVFRADGFKCGSDWTKAVFSPDRSYALAGSCDGALYIWDVDT 579
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 129 (50.5 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 52/207 (25%), Positives = 90/207 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLV 68
+GH +RV S+ SP +G L W+ + + + + +VAF G +
Sbjct: 122 EGHSDRVESVAFSP------NGQL------WNPAIGSLKHTIEGHSDWVLSVAFSPDGQL 169
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
A IKL+DS + G T +GG + V + FS DG+ + + + I + D
Sbjct: 170 LASGSAEKTIKLWDSATC--GLKHT--LGGHSNWVLPLVFSPDGRLLASGSNDATIKLWD 225
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGV 188
G + +LE N F+P+GQ + SGS D T+ W+ T + G+ +
Sbjct: 226 PPSGSLK--HTLEGHSNKIESLAFSPNGQLLASGSSDATIKLWDTATGSFRHTLKGHSDM 283
Query: 189 VACLKWAPRRAMFVAAS--SVLSFWIP 213
V + ++P + + S + + W P
Sbjct: 284 VLSVVFSPDSQLLESGSGDNTIKLWDP 310
Score = 114 (45.2 bits), Expect = 0.00041, P = 0.00041
Identities = 47/206 (22%), Positives = 86/206 (41%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLV 68
+GH V S+ SP SGS D ++++W+ ++ + + +VAF G +
Sbjct: 80 EGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL 139
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
+ A+ G++K + G + V + FS DG+ + + I + D
Sbjct: 140 WNPAI--GSLK--------------HTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWD 183
Query: 129 -AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
A G K +L N F+PDG+ + SGS D T+ W+ + + G+
Sbjct: 184 SATCGLKH---TLGGHSNWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSN 240
Query: 188 VVACLKWAPRRAMFVAASS--VLSFW 211
+ L ++P + + SS + W
Sbjct: 241 KIESLAFSPNGQLLASGSSDATIKLW 266
Score = 113 (44.8 bits), Expect = 0.00053, P = 0.00053
Identities = 52/216 (24%), Positives = 88/216 (40%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQ 64
L+ +GH + + ++ SP SGS D ++++WD + L +VAF
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
G + A IKL++S S + G + V + FS +G+ N
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSL----KHTMEGHSDRVESVAFSPNGQLW-------N- 141
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG 184
A G K ++E + F+PDGQ + SGS + T+ W+ T G
Sbjct: 142 ---PAIGSLKH---TIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGG 195
Query: 185 NIGVVACLKWAPRRAMFVAASS--VLSFWIPNPSSN 218
+ V L ++P + + S+ + W P PS +
Sbjct: 196 HSNWVLPLVFSPDGRLLASGSNDATIKLWDP-PSGS 230
>UNIPROTKB|F1RKU4 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GeneTree:ENSGT00700000104507
GO:GO:0055087 EMBL:CU467054 Ensembl:ENSSSCT00000001963 OMA:PPSEVWG
Uniprot:F1RKU4
Length = 287
Score = 117 (46.2 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 48/175 (27%), Positives = 73/175 (41%)
Query: 37 SVRIWDLRVNACQGILRLRGRP----TVAFDQQGLVFAVAMEAGAIKLFDSRSYDKG-PF 91
SVR+WDL N Q I + P T+AF A G + +F S K
Sbjct: 69 SVRLWDLE-NGKQ-IKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSL 126
Query: 92 DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEAT 151
DT G + I +S DGK + + I + D G+ +LE T
Sbjct: 127 DT---RGKF--ILSIAYSPDGKYLASGAIDGIINIFDIATGKLL--HTLEGHAMPIRSLT 179
Query: 152 FTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
F+PD Q +V+ S DG + +++ N +G+ V + + P FV++SS
Sbjct: 180 FSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 234
Score = 44 (20.5 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 26 NDSFMSGSLDHSVRIWDLR 44
+++ ++GSLD V++W R
Sbjct: 32 SETVVTGSLDDLVKVWKWR 50
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 132 (51.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 50/211 (23%), Positives = 89/211 (42%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDL-RVNACQGIL-RLRGRPTVAFD 63
L+ F H V L + + + +G DH V +W + + NA + G +V FD
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 64 -QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
+GLV A A +G IKL+D ++ L G + + F G+ + +
Sbjct: 69 ASEGLVAAGAA-SGTIKLWD---LEEAKVVRTLTG-HRSNCVSVNFHPFGEFFASGSLDT 123
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACW 182
N+ + D +K C + + FTPDG+++VSG D + W++ + +
Sbjct: 124 NLKIWDIR--KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF 181
Query: 183 NGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
+ G + L + P + S+ + FW
Sbjct: 182 KSHEGKIQSLDFHPHEFLLATGSADKTVKFW 212
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 134 (52.2 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 47/210 (22%), Positives = 86/210 (40%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDL-RVNACQGIL-RLRGRPTVAFD 63
L+ F H V L + + + +G DH V +W + + NA + G +V FD
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFD 68
Query: 64 QQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
++ A +G IKL+D ++ L G + + F G+ + + N
Sbjct: 69 ASEVLVAAGAASGTIKLWD---LEEAKIVRTLTG-HRSNCISVDFHPFGEFFASGSLDTN 124
Query: 124 IYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWN 183
+ + D +K C + + FTPDG++VVSG D + W++ + +
Sbjct: 125 LKIWDIR--KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFK 182
Query: 184 GNIGVVACLKWAPRRAMFVAASS--VLSFW 211
+ G + L + P + S+ + FW
Sbjct: 183 SHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 37 (18.1 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 203 AASSVLSFWIPNPSSNSTDESTD 225
AA+S +F NP +N +++ D
Sbjct: 445 AATSRRNFTKANPKANPVNKAAD 467
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 48/212 (22%), Positives = 91/212 (42%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTV 60
+++R F+GH +V ++ + +SGS+D ++R WD R + + L G +V
Sbjct: 100 QVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWDCRSRKPEPVQTLDEARDGISSV 159
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
V A +++ G ++ +D R G + VG +C FS DG+ L+++
Sbjct: 160 KVSDHE-VLAGSVD-GRVRRYDLRM---GQLFSDYVGSPITCIC---FSRDGQCTLVSSL 211
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
++ + +LD GE ++ + + + +VVS S DG + W++
Sbjct: 212 DSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALAL 271
Query: 181 CWNGNIGVVACLKWAPRR-AMFVAASSVLSFW 211
GVV L + P + A + W
Sbjct: 272 ALPVGPGVVQSLTYHPTEPCLLTAMGGSIQCW 303
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 50/212 (23%), Positives = 94/212 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRL-RGRPTVAFD 63
+++R F+GH +V ++ + +SGS+D S+R WD R + + L R V+
Sbjct: 100 QVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGVSSV 159
Query: 64 QQG--LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+ + A +++ G ++ +D R G + VG C FS DG+ L+++ +
Sbjct: 160 KVSDHEILAGSVD-GRVRRYDLRM---GQLFSDYVGSPITCTC---FSRDGQCTLVSSLD 212
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN-INTRNEVA 180
+ + +LD GE + + + + +VVS S DG + W+ + +A
Sbjct: 213 STLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALALA 272
Query: 181 CWNGNIGVVACLKWAPRR-AMFVAASSVLSFW 211
G+ GVV L + P + A + W
Sbjct: 273 LPVGS-GVVQSLAYHPTEPCLLTAMGGSVQCW 303
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 126 (49.4 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 48/212 (22%), Positives = 91/212 (42%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTV 60
+++R F+GH +V ++ + +SGS+D SVR WD R + + L G +V
Sbjct: 100 QVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSV 159
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
++ A +++ G ++ +D R G + VG C FS DG+ L+++
Sbjct: 160 KVSDHEIL-AGSVD-GRVRRYDLRM---GQVTSDYVGSPITCTC---FSRDGQCTLISSL 211
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
++ + +LD GE + + + + +VVS S DG + W++ +
Sbjct: 212 DSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLAL 271
Query: 181 CWNGNIGVVACLKWAPRR-AMFVAASSVLSFW 211
VV L + P + A + +W
Sbjct: 272 ALPVGSNVVQSLAYHPADPCLLTAMGGSIQYW 303
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 88 (36.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 25/76 (32%), Positives = 35/76 (46%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNA----CQGILRLRGRPTVAFDQQG 66
+GH E VIS+ SP SGS D +VR WDL C+G ++++ G
Sbjct: 113 EGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKG--HRHWVLSISWSPDG 170
Query: 67 LVFAVAMEAGAIKLFD 82
A + G I L+D
Sbjct: 171 KKLASGCKNGQILLWD 186
Score = 84 (34.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 149 EATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASS-- 206
+ F+PD + V S S D ++ W+ T +A G++ V + W+ + V+ SS
Sbjct: 379 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 438
Query: 207 VLSFWIPNPSSNSTD 221
L W +TD
Sbjct: 439 TLKVWDVKAQKLTTD 453
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 121 (47.7 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/205 (21%), Positives = 87/205 (42%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMS-GSLDHSVRIWDLRVNACQGILRLRGR--P--TVA 61
L+ H V SL + + ++ G D V +W + C I+ L G P +V
Sbjct: 13 LQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNC--IMSLTGHTSPVESVR 70
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+ + ++G+I+++D + T + G A +C + F G+ + + +
Sbjct: 71 LNTPEELIVAGSQSGSIRVWDLEAAKI--LRTLM--GHKANICSLDFHPYGEFVASGSQD 126
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVAC 181
NI + D K C F F+PDG+++ S + D T+ W++ ++
Sbjct: 127 TNIKLWDIR--RKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE 184
Query: 182 WNGNIGVVACLKWAPRRAMFVAASS 206
+ G+ G V +++ P + + SS
Sbjct: 185 FPGHTGPVNVVEFHPNEYLLASGSS 209
Score = 112 (44.5 bits), Expect = 0.00014, P = 0.00014
Identities = 27/82 (32%), Positives = 39/82 (47%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--- 61
+ILR GHK + SL P + SGS D ++++WD+R C + R RG
Sbjct: 96 KILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGC--VFRYRGHSQAVRCL 153
Query: 62 -FDQQGLVFAVAMEAGAIKLFD 82
F G A A + +KL+D
Sbjct: 154 RFSPDGKWLASAADDHTVKLWD 175
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 126 (49.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/165 (26%), Positives = 67/165 (40%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGL 67
F GH +SL +SP F+SG+ D S ++WD+R C+ + F G
Sbjct: 180 FVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGE 239
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ + +LFD R+ D+ + + + FS G+ + + N V
Sbjct: 240 AICTGSDDASCRLFDLRA-DQ-ELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
D+ E R G L N + T DG V +GS D L WN
Sbjct: 298 DSLKCE-RVGV-LSGHDNRVSCLGVTADGMAVATGSWDSFLKIWN 340
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/214 (25%), Positives = 90/214 (42%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR--LRGRPTVAF 62
R+L GH+ V S C SP S S DHS+R+WD+ + C +L+ R TV+F
Sbjct: 59 RLLWRLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSF 118
Query: 63 DQQGLVFAVA-MEAGAIKLFDSRSYDKGPFDTFLVGG-DTAEVCDIKFSNDGKSMLLTTT 120
A + AI +++ +S G LVG D+ + D FS S+ +
Sbjct: 119 SPDSKQLASGGWDKRAI-VWEVQS---GRRVHLLVGHCDSIQSSD--FSPTSDSLATGSW 172
Query: 121 NNNIYVLDAYGGEKRCGF-SLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV 179
++ +++ D + +LE + ++ G + SGS D T+ W T N
Sbjct: 173 DSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKTICVWKPTTNNLP 231
Query: 180 ACWNGNIGVVACLKWAPRRAMFVAA--SSVLSFW 211
G+ V L ++P +A S + W
Sbjct: 232 LQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
>ASPGD|ASPL0000054968 [details] [associations]
symbol:AN1387 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319
EMBL:AACD01000019 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN RefSeq:XP_658991.1 ProteinModelPortal:Q5BDJ3
EnsemblFungi:CADANIAT00001220 GeneID:2877164 KEGG:ani:AN1387.2
Uniprot:Q5BDJ3
Length = 306
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 44/174 (25%), Positives = 78/174 (44%)
Query: 29 FMSGSL-DHSVRIWDLRVNACQGIL--RLRGRPTVAFD--QQGLVFAVAMEAGAIKLFDS 83
+++G+ D V++WD+ N + I +G D G A E G++ +F +
Sbjct: 115 YLAGTTQDGHVKVWDMNANE-EEIRDHETKGSFGTCIDLSPDGRFIASGHENGSVYIFST 173
Query: 84 RSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPS 143
+ + PF + G V + FS GK + + I + D GE+ SL
Sbjct: 174 ET-GRMPFS---LSGLVKPVRSVAFSPGGKFLAAAGDSRVIVLYDTTSGEQVA--SLTGH 227
Query: 144 PNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPR 197
+++ G+Y++SGS DG + W+I+TRN VA + + + W P+
Sbjct: 228 AAWILSLSWSNTGEYLLSGSFDGKVKVWSIDTRNCVATHSETERAIWSVIWLPK 281
>WB|WBGene00015697 [details] [associations]
symbol:C10H11.8b species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0019915 "lipid storage"
evidence=IMP] [GO:0031929 "TOR signaling cascade" evidence=ISS]
[GO:0031931 "TORC1 complex" evidence=ISS] [GO:0031932 "TORC2
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040018 GO:GO:0019915 GO:GO:0031931
GO:GO:0031932 GeneTree:ENSGT00390000014795 EMBL:FO080502
GeneID:182509 KEGG:cel:CELE_C10H11.8 CTD:182509 PIR:T25538
RefSeq:NP_001249709.1 ProteinModelPortal:P91040 SMR:P91040
STRING:P91040 PaxDb:P91040 EnsemblMetazoa:C10H11.8a UCSC:C10H11.8
WormBase:C10H11.8a HOGENOM:HOG000017260 InParanoid:P91040
OMA:CRIWEMR NextBio:917840 Uniprot:P91040
Length = 382
Score = 116 (45.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 23/80 (28%), Positives = 46/80 (57%)
Query: 107 KFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 166
++S DGK ++ + + +YV ++ E + G SL+ N +A F+ +G+Y+ +G D
Sbjct: 290 RYSPDGKYIVASGSEKEVYVFNSETMEIK-G-SLQTECGWNWDAIFSSEGRYIFTGGNDN 347
Query: 167 TLHAWNINTRNEVACWNGNI 186
+ W++ +VA W+G+I
Sbjct: 348 QVKIWDVENNKKVAQWDGHI 367
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 30 MSGSLDHSVRIWDLRVNACQGIL 52
+S S D ++R+W L C G +
Sbjct: 55 VSASYDLTIRLWQLSTGKCIGTI 77
>UNIPROTKB|Q2TBS9 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GeneTree:ENSGT00700000104461 EMBL:BC109712 IPI:IPI00726295
RefSeq:NP_001033662.1 UniGene:Bt.25206 ProteinModelPortal:Q2TBS9
SMR:Q2TBS9 STRING:Q2TBS9 PRIDE:Q2TBS9 Ensembl:ENSBTAT00000020865
GeneID:540842 KEGG:bta:540842 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 InParanoid:Q2TBS9 KO:K13111 OMA:NGHWDTV
OrthoDB:EOG49ZXP0 NextBio:20878868 Uniprot:Q2TBS9
Length = 513
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/185 (25%), Positives = 76/185 (41%)
Query: 2 YDNRILRYFK-GHKERVISLCMSPVNDSFMSGSLDHSVRIW---------DLRVNACQGI 51
+ ++ R+ K G K V SP ++GS+D + +W DL+ A
Sbjct: 201 FPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNF 260
Query: 52 LRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 110
+ + + F + + A + G IK++ +S F C + FS
Sbjct: 261 MMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQC--LRRFERAHSKGVTC-LSFSK 317
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170
D +L + + I + G+ F S N EATFT DG Y++S S DGT+
Sbjct: 318 DSSQILSASFDQTIRIHGLKSGKTLKEFRGHSS-FVN-EATFTQDGHYIISASSDGTVKI 375
Query: 171 WNINT 175
WN+ T
Sbjct: 376 WNMKT 380
>UNIPROTKB|Q2TAY7 [details] [associations]
symbol:SMU1 "WD40 repeat-containing protein SMU1"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL162590 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AK001667 EMBL:AK022032
EMBL:BC002876 EMBL:BC110654 IPI:IPI00305833 RefSeq:NP_060695.2
UniGene:Hs.655351 ProteinModelPortal:Q2TAY7 SMR:Q2TAY7
IntAct:Q2TAY7 MINT:MINT-256588 STRING:Q2TAY7 PhosphoSite:Q2TAY7
DMDM:109939732 PaxDb:Q2TAY7 PeptideAtlas:Q2TAY7 PRIDE:Q2TAY7
DNASU:55234 Ensembl:ENST00000397149 GeneID:55234 KEGG:hsa:55234
UCSC:uc003zsf.1 GeneCards:GC09M033041 HGNC:HGNC:18247 HPA:HPA019228
HPA:HPA019708 neXtProt:NX_Q2TAY7 PharmGKB:PA134903890
PhylomeDB:Q2TAY7 ChiTaRS:SMU1 GenomeRNAi:55234 NextBio:59249
ArrayExpress:Q2TAY7 Bgee:Q2TAY7 CleanEx:HS_SMU1
Genevestigator:Q2TAY7 GermOnline:ENSG00000122692 Uniprot:Q2TAY7
Length = 513
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/185 (25%), Positives = 76/185 (41%)
Query: 2 YDNRILRYFK-GHKERVISLCMSPVNDSFMSGSLDHSVRIW---------DLRVNACQGI 51
+ ++ R+ K G K V SP ++GS+D + +W DL+ A
Sbjct: 201 FPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNF 260
Query: 52 LRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 110
+ + + F + + A + G IK++ +S F C + FS
Sbjct: 261 MMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQC--LRRFERAHSKGVTC-LSFSK 317
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170
D +L + + I + G+ F S N EATFT DG Y++S S DGT+
Sbjct: 318 DSSQILSASFDQTIRIHGLKSGKTLKEFRGHSS-FVN-EATFTQDGHYIISASSDGTVKI 375
Query: 171 WNINT 175
WN+ T
Sbjct: 376 WNMKT 380
>MGI|MGI:1915546 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog
(C. elegans)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
MGI:MGI:1915546 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
CTD:55234 HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111
OMA:NGHWDTV OrthoDB:EOG49ZXP0 EMBL:AB044414 EMBL:AK003493
EMBL:AK011140 EMBL:AK145982 EMBL:AK159635 EMBL:AK168813
EMBL:BC057446 IPI:IPI00331342 IPI:IPI00760034 RefSeq:NP_067510.3
UniGene:Mm.289929 ProteinModelPortal:Q3UKJ7 SMR:Q3UKJ7
STRING:Q3UKJ7 PhosphoSite:Q3UKJ7 PaxDb:Q3UKJ7 PRIDE:Q3UKJ7
Ensembl:ENSMUST00000030117 GeneID:74255 KEGG:mmu:74255
UCSC:uc008shv.2 InParanoid:Q3UKJ7 NextBio:340258 Bgee:Q3UKJ7
Genevestigator:Q3UKJ7 GermOnline:ENSMUSG00000028409 Uniprot:Q3UKJ7
Length = 513
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/185 (25%), Positives = 76/185 (41%)
Query: 2 YDNRILRYFK-GHKERVISLCMSPVNDSFMSGSLDHSVRIW---------DLRVNACQGI 51
+ ++ R+ K G K V SP ++GS+D + +W DL+ A
Sbjct: 201 FPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNF 260
Query: 52 LRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 110
+ + + F + + A + G IK++ +S F C + FS
Sbjct: 261 MMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQC--LRRFERAHSKGVTC-LSFSK 317
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170
D +L + + I + G+ F S N EATFT DG Y++S S DGT+
Sbjct: 318 DSSQILSASFDQTIRIHGLKSGKTLKEFRGHSS-FVN-EATFTQDGHYIISASSDGTVKI 375
Query: 171 WNINT 175
WN+ T
Sbjct: 376 WNMKT 380
>RGD|620694 [details] [associations]
symbol:Smu1 "smu-1 suppressor of mec-8 and unc-52 homolog (C.
elegans)" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620694
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 CTD:55234 HOGENOM:HOG000264846
HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0 EMBL:AY029526
IPI:IPI00197468 RefSeq:NP_476543.1 UniGene:Rn.54978
ProteinModelPortal:Q99M63 STRING:Q99M63 PRIDE:Q99M63 GeneID:117541
KEGG:rno:117541 UCSC:RGD:620694 InParanoid:Q99M63 NextBio:620357
Genevestigator:Q99M63 GermOnline:ENSRNOG00000007671 Uniprot:Q99M63
Length = 513
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 47/185 (25%), Positives = 76/185 (41%)
Query: 2 YDNRILRYFK-GHKERVISLCMSPVNDSFMSGSLDHSVRIW---------DLRVNACQGI 51
+ ++ R+ K G K V SP ++GS+D + +W DL+ A
Sbjct: 201 FPTQLSRHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNF 260
Query: 52 LRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 110
+ + + F + + A + G IK++ +S F C + FS
Sbjct: 261 MMMDDAVLCMCFSRDTEMLATGAQDGKIKVWKIQSGQC--LRRFERAHSKGVTC-LSFSK 317
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170
D +L + + I + G+ F S N EATFT DG Y++S S DGT+
Sbjct: 318 DSSQILSASFDQTIRIHGLKSGKTLKEFRGHSS-FVN-EATFTQDGHYIISASSDGTVKI 375
Query: 171 WNINT 175
WN+ T
Sbjct: 376 WNMKT 380
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/206 (22%), Positives = 86/206 (41%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGL 67
FKGH V S+ S + S S D +V+IWD + Q L +V F
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSR 318
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
+ A A + G +K++D+ + G L G + + V + FS+D + + + + + +
Sbjct: 319 LLASASDDGTVKIWDTAT---GTLQRMLKGHNDS-VRSVVFSHDSRLIASGSNDRTVRIW 374
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
+ G R F E ++ +F D + + S S G + W+ T + G+
Sbjct: 375 ETTTGLLRHTF--EDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDD 432
Query: 188 VVACLKWAPRRAMFVAASS--VLSFW 211
V + ++P + +AS + W
Sbjct: 433 CVNSVSFSPDSRLLASASDDRTVKIW 458
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 43/170 (25%), Positives = 71/170 (41%)
Query: 8 RYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA--FDQQ 65
R KGH + V S+ S + SGS D +VRIW+ + +A F
Sbjct: 341 RMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHD 400
Query: 66 GLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A A + G +K++D+R+ G L G D V + FS D + + + + +
Sbjct: 401 SRRLASASDGGNVKIWDTRT---GSLQNVLEGHDDC-VNSVSFSPDSRLLASASDDRTVK 456
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
+ A G + +LE + F+ D + + S S D T+ W+ T
Sbjct: 457 IWHAATGSLQR--TLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTAT 504
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 46/205 (22%), Positives = 84/205 (40%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLV 68
+GH + V S+ SP + S S D +V+IW + Q L +V F +
Sbjct: 428 EGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRL 487
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
A A + +K++D+ + P L D V + FS+D + + + + + + D
Sbjct: 488 IASASDDMTVKIWDTATV---PLQNNLESHDNW-VRSVVFSHDSRLLASASDDMTVKIWD 543
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGV 188
G +LE + +F+PD + + S S DGT+ W T ++G+ V
Sbjct: 544 TATGSLEN--TLEGHDDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRV 601
Query: 189 VACLKWAPRRAMFVAA--SSVLSFW 211
L ++ + +A + W
Sbjct: 602 AISLAFSHTSNLLASAMDDGTVKIW 626
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 129 (50.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 47/216 (21%), Positives = 93/216 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQ----GL 67
GH V S SP D +S S D ++R+W ++NA ++ +G +D Q G
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA--NLVCYKGHNYPVWDAQFSPFGH 473
Query: 68 VFAVAMEAGAIKLFDSRSYDK-GPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYV 126
FA +++ S D+ P ++ G ++V +++ + + +++ + +
Sbjct: 474 YFASCSHDRTARIW---SMDRIQPLR--IMAGHLSDVDCVQWHPNCNYIATGSSDKTVRL 528
Query: 127 LDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNI 186
D GE C + +PDG+Y+ SG DGT+ W+++T + G+
Sbjct: 529 WDVQTGE--CVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN 586
Query: 187 GVVACLKWAPRRAMFVAASS--VLSFWIPNPSSNST 220
V L ++ ++ + S+ + W S+ T
Sbjct: 587 SCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLT 622
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 128 (50.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/211 (24%), Positives = 86/211 (40%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVAFDQ 64
I F GH++ + SL + SGS D +VR+WD+ L + G TVA
Sbjct: 350 IKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDGVTTVAMSP 409
Query: 65 QGLVFAVAMEAGAIKLFDSRS-YDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNN 123
GL A ++++D+ + Y + G V + F+ +GK ++ + +
Sbjct: 410 DGLYVAAGSLDKTVRVWDTTTGYLVERLEN--PDGHKDSVYSVAFAPNGKELVSGSLDKT 467
Query: 124 IYVLDA------Y---GGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN 174
I + + Y G +C + E + TPDG +V+SGS D + W+
Sbjct: 468 IKLWELNLPRQQYNSAGKGGKCHRTFEGHKDFVLSVCLTPDGHWVMSGSKDRGVQFWDPI 527
Query: 175 TRNEVACWNGNIGVVACLKWAPRRAMFVAAS 205
T N G+ V + +P +F S
Sbjct: 528 TGNAQMMLQGHKNSVISVAPSPTGNLFATGS 558
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 43/169 (25%), Positives = 75/169 (44%)
Query: 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG-RPTV---AFDQQGLV 68
HK V S+C S +D ++G +D+ +R+WD+R N + L + T+ + + G
Sbjct: 188 HKYPVTSVCFSDASDQLITGGIDNVIRVWDIR-NQEDPLYTLASHQDTITSTSVSKDGAY 246
Query: 69 FAVAMEAGAIKLFDSRSY--DKGPFDTFLVGGDTAEVCDIK--FSNDGKSMLLTTTNNNI 124
+ K++D R Y TF + E IK +S DG+ + +++ +
Sbjct: 247 LLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQV 306
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
Y+ D K+ + L T E TF P+ + S S D T++ I
Sbjct: 307 YIWDT--NTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDKTIYLGEI 353
Score = 113 (44.8 bits), Expect = 0.00038, P = 0.00038
Identities = 44/168 (26%), Positives = 74/168 (44%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGHK ++ L S ++ + D S+ +WD N + I R+R V ++G
Sbjct: 102 KGHKGTILELHWSTDSNEIYTACTDKSIGVWDS--NKGELIKRIREHSGVVNSCCPARRG 159
Query: 67 L-VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ A + + ++FD+RS KG F VC FS+ ++ +N I
Sbjct: 160 PPLVASGSDDRSARIFDTRS--KGSTHLFQHKYPVTSVC---FSDASDQLITGGIDNVIR 214
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
V D E ++L +T T + + DG Y++S S D + W+I
Sbjct: 215 VWDIRNQEDPL-YTLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDI 261
Score = 112 (44.5 bits), Expect = 0.00050, P = 0.00050
Identities = 49/210 (23%), Positives = 91/210 (43%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNACQGILRLRGRPT-VAF- 62
+++ + H V S C + + SGS D S RI+D R + + + T V F
Sbjct: 139 LIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIFDTRSKGSTHLFQHKYPVTSVCFS 198
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
D + ++ I+++D R+ + P T DT + S DG +L + +N
Sbjct: 199 DASDQLITGGID-NVIRVWDIRNQED-PLYTLASHQDT--ITSTSVSKDGAYLLSNSMDN 254
Query: 123 NIYVLDA--YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINTR 176
+ + D Y R + + N N +++++ DG+ + GS D ++ W+ NT+
Sbjct: 255 SCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLIKSSWSIDGRRIGCGSSDRQVYIWDTNTK 314
Query: 177 NEVACWNGNIGVVACLKWAPRRAMFVAASS 206
C G+ G V + + P + + SS
Sbjct: 315 QLQYCLPGHSGTVNEVTFHPNEPIIASCSS 344
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 106 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 163
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 164 PQLVCTGSDDGTVKLWDIRK--KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 218
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 219 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 276
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASS 206
+ GN+ ++ C W+P + A S+
Sbjct: 277 FQGNVHNFEKNLLRC-SWSPDGSKIAAGSA 305
Score = 123 (48.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 49/211 (23%), Positives = 94/211 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNAC-QGILRLRGRPTVAF 62
R+ R KGH V S + + +GS D +V++WD+R A Q V F
Sbjct: 143 RVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF 201
Query: 63 -DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
D + + ++ IK++D R T+ + G V + S++G +L +
Sbjct: 202 NDTSDQIISGGID-NDIKVWDLRQNKL----TYTMRGHADSVTGLSLSSEGSYLLSNAMD 256
Query: 122 NNIYVLDA--YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINT 175
N + V D + ++RC + + + N +++PDG + +GS D ++ W+ +
Sbjct: 257 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 316
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
R + G+ G + + + P + ++ASS
Sbjct: 317 RRILYKLPGHAGSINEVAFHPDEPIIISASS 347
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 107 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 164
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK--KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 220 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASS 206
+ GN+ ++ C W+P + A S+
Sbjct: 278 FQGNVHNFEKNLLRC-SWSPDGSKIAAGSA 306
Score = 121 (47.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 49/211 (23%), Positives = 94/211 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNAC-QGILRLRGRPTVAF 62
R+ R KGH V S + + +GS D +V++WD+R A Q V F
Sbjct: 144 RVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF 202
Query: 63 -DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
D + + ++ IK++D R T+ + G V + S++G +L +
Sbjct: 203 NDTSDQIISGGID-NDIKVWDLRQNKL----TYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 NNIYVLDA--YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINT 175
N + V D + ++RC + + + N +++PDG + +GS D ++ W+ +
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
R + G+ G + + + P + ++ASS
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASS 348
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 107 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 164
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK--KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 220 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRI 277
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASS 206
+ GN+ ++ C W+P + A S+
Sbjct: 278 FQGNVHNFEKNLLRC-SWSPDGSKIAAGSA 306
Score = 121 (47.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 49/211 (23%), Positives = 94/211 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNAC-QGILRLRGRPTVAF 62
R+ R KGH V S + + +GS D +V++WD+R A Q V F
Sbjct: 144 RVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF 202
Query: 63 -DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
D + + ++ IK++D R T+ + G V + S++G +L +
Sbjct: 203 NDTSDQIISGGID-NDIKVWDLRQNKL----TYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 NNIYVLDA--YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINT 175
N + V D + ++RC + + + N +++PDG + +GS D ++ W+ +
Sbjct: 258 NTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
R + G+ G + + + P + ++ASS
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASS 348
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 125 (49.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 107 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 164
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK--KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 220 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASS 206
+ GN+ ++ C W+P + A S+
Sbjct: 278 FQGNVHNFEKNLLRC-SWSPDGSKIAAGSA 306
Score = 121 (47.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 49/211 (23%), Positives = 94/211 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNAC-QGILRLRGRPTVAF 62
R+ R KGH V S + + +GS D +V++WD+R A Q V F
Sbjct: 144 RVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAIQTFQNTYQVLAVTF 202
Query: 63 -DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
D + + ++ IK++D R T+ + G V + S++G +L +
Sbjct: 203 NDTSDQIISGGID-NDIKVWDLRQNKL----TYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 NNIYVLDA--YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINT 175
N + V D + ++RC + + + N +++PDG + +GS D ++ W+ +
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
R + G+ G + + + P + ++ASS
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASS 348
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 47/204 (23%), Positives = 89/204 (43%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTV 60
+++R F+GH +V ++ + +SGS+D S+R WD R + + L G +V
Sbjct: 100 QVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWDCRSRRPEPVQTLDEARDGISSV 159
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
V + +++ G ++ +D R G + VG C FS DG+ L+++
Sbjct: 160 KVSDHE-VLSGSVD-GRVRRYDLRM---GQLFSDYVGSPITCTC---FSRDGQCTLVSSL 211
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
++ + +LD GE ++ + + + +VVS S DG ++ W++
Sbjct: 212 DSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGALAL 271
Query: 181 CWNGNIGVVACLKWAPRRAMFVAA 204
GVV L + P + A
Sbjct: 272 ALPVGPGVVQSLAYHPTEPCLLTA 295
>SGD|S000000379 [details] [associations]
symbol:SWD3 "Essential subunit of the COMPASS (Set1C)
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005694
"chromosome" evidence=IEA] [GO:0051568 "histone H3-K4 methylation"
evidence=IMP;IDA] [GO:0048188 "Set1C/COMPASS complex" evidence=IPI]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IDA;IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000379 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936
GO:GO:0006348 GO:GO:0048188 GO:GO:0051568 GO:GO:0000781
GO:GO:0000723 KO:K14963 OrthoDB:EOG49CTJ0 EMBL:Z36043 EMBL:AY693212
PIR:S46046 RefSeq:NP_009734.1 ProteinModelPortal:P38123 SMR:P38123
DIP:DIP-1754N IntAct:P38123 MINT:MINT-393581 STRING:P38123
PaxDb:P38123 PeptideAtlas:P38123 EnsemblFungi:YBR175W GeneID:852472
KEGG:sce:YBR175W CYGD:YBR175w HOGENOM:HOG000091642 OMA:IRIWCAR
NextBio:971432 Genevestigator:P38123 GermOnline:YBR175W
Uniprot:P38123
Length = 315
Score = 124 (48.7 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 46/200 (23%), Positives = 87/200 (43%)
Query: 6 ILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD-- 63
+L F GH VISL + + + S+D S++IWD + + V+ D
Sbjct: 88 LLHTFIGHTAPVISLTFNRKGNLLFTSSMDESIKIWDTLNGSLMKTISAHSEAVVSVDVP 147
Query: 64 -QQGLVFAVAMEAGAIKLFDSRS--------YDKGPFDTFLVGGDTAEVCDIKFSNDGKS 114
+ + G I++FD+ + YDK D G + +KFS + +
Sbjct: 148 MNDSSILSSGSYDGLIRIFDAETGHCLKTLTYDK---DWKRENG-VVPISQVKFSENARY 203
Query: 115 MLLTTTNNNIYVLDAYGGEKRCGFSLEPSP----NTNTEATF-TP-DGQ--YVVSGSGDG 166
+L+ + + + + D GG F ++P + + F P DG V+SG +G
Sbjct: 204 LLVKSLDGVVKIWDCIGGCVVRTFQVQPLEKGVLHHSCGMDFLNPEDGSTPLVISGYENG 263
Query: 167 TLHAWNINTRNEVACWNGNI 186
++ WN +T++ + +G++
Sbjct: 264 DIYCWNSDTKSLLQLLDGSL 283
>UNIPROTKB|P73594 [details] [associations]
symbol:slr1409 "Uncharacterized WD repeat-containing
protein slr1409" species:1111708 "Synechocystis sp. PCC 6803
substr. Kazusa" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0030288 EMBL:BA000022
GenomeReviews:BA000022_GR PIR:S77304 RefSeq:NP_440958.1
RefSeq:YP_005651017.1 ProteinModelPortal:P73594 STRING:P73594
GeneID:12255183 GeneID:954268 KEGG:syn:slr1409 KEGG:syy:SYNGTS_1064
PATRIC:23839190 OMA:CCNFSPQ ProtClustDB:CLSK501008 Uniprot:P73594
Length = 326
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 45/206 (21%), Positives = 90/206 (43%)
Query: 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVA 72
H+ V SP + ++ S D +I+ + +L+ +A+ QGL+ A
Sbjct: 130 HRAAVADAIFSPDSQIIVTCSDDGQTKIFTRQGQEIASVLKSGTARNLAYHPQGLLIASV 189
Query: 73 MEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGG 132
++G++ L + G + + G + ++ FS +G+ +L + N + + + G
Sbjct: 190 SDSGSLHLINPN----GKIEREISTGQ-GRINNVNFSPNGEQLLTSGINGSAKLWNL-AG 243
Query: 133 EKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR--NEVACWNGNIGVVA 190
E + + P+ N+ A F P G+++ + S DGT+ W + + E+ N +
Sbjct: 244 ELIHEYKVVPTGWVNS-AQFYPKGEWLATASDDGTIRFWQKDGQLIYELPLVNARL---T 299
Query: 191 CLKWAPRRAMFVAASSVLSFWIPNPS 216
L ++P A SS W+ N S
Sbjct: 300 SLSFSPDGKQLAATSSQGQVWVFNLS 325
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 124 (48.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 51/178 (28%), Positives = 82/178 (46%)
Query: 12 GHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLR-VNACQ-GILR--LRGRP----TVAF 62
GH V S+ +SP N D+ +S S D +V +W L +A G L+G V
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 63 DQQGLVFAVAME-AGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
G FA++ ++L+D KG T L G T +V + FS+D + ++ + +
Sbjct: 79 SHDGQ-FALSGSWDNTLRLWD---ITKG-VSTRLFKGHTQDVMSVAFSSDNRQIISGSRD 133
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTE----ATFTPDGQYVVSGSGDGTLHAWNINT 175
I V + G C F+LE P + + F+P+ +VSGS D + W+I +
Sbjct: 134 ATIKVWNTLG---ECKFTLE-GPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS 187
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQ 64
+R KGH V S+ +P+ +SGS D +VRIW+L+ C +L P +V+
Sbjct: 131 VRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVSISA 190
Query: 65 QGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
G + A A G +++D S G LV + +++F+ + K +L++ N+ I
Sbjct: 191 DGTLCATASYDGMARIWDVLS---GQCLKTLVEPINVPLSNLQFTENRKYLLVSNLNSQI 247
Query: 125 YVLD 128
+ D
Sbjct: 248 RLWD 251
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 125 (49.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 50/211 (23%), Positives = 93/211 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNAC-QGILRLRGRPTVAF 62
R+ R KGH V S + + +GS D +V++WD+R A Q V F
Sbjct: 170 RVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTF 228
Query: 63 -DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
D + + ++ IK++D R T+ + G V + S++G +L +
Sbjct: 229 NDTSDQIISGGID-NDIKVWDLRQNKL----TYTMRGHADSVTGLSLSSEGSYLLSNAMD 283
Query: 122 NNIYVLDA--YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINT 175
N + + D + ++RC + + + N +++PDG + GS D ++ W+ +
Sbjct: 284 NTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTS 343
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
R + G+ G V L + P + ++ASS
Sbjct: 344 RRILYKLPGHAGSVNELAFHPEEPIILSASS 374
Score = 119 (46.9 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 45/210 (21%), Positives = 91/210 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 133 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 190
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 191 PQLVCTGSDDGTVKLWDIRK--KAAVQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 245
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 246 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKI 303
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASS 206
+ GN+ ++ C W+P + S+
Sbjct: 304 FQGNVHNFEKNLLRC-SWSPDGSKIAGGSA 332
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/190 (26%), Positives = 82/190 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH + SL +S + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 60 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLE--AAKILRTLLGHKANICSLDFHPYGS 117
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A IKL+D R KG F T V ++FS DGK + ++ + +
Sbjct: 118 FVASGSLDTDIKLWDVRR--KGCI--FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 173
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV-SGSGDGTLHAWNINTRNEVACWNGNI 186
D G+ F+ P E F P +Y++ SGS T+ W++ + V+C
Sbjct: 174 DLTAGKVMFEFTGHYGPVNVVE--FHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEA 231
Query: 187 GVVACLKWAP 196
V C+ + P
Sbjct: 232 TPVRCILFNP 241
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 51/190 (26%), Positives = 82/190 (43%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP----TVAFDQQGL 67
GH + SL +S + ++GS S+R+WDL A + + L G ++ F G
Sbjct: 61 GHTTPIESLQISAKEELIVAGSQSGSIRVWDLE--AAKILRTLLGHKANICSLDFHPYGS 118
Query: 68 VFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A IKL+D R KG F T V ++FS DGK + ++ + +
Sbjct: 119 FVASGSLDTDIKLWDVRR--KGCI--FKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLW 174
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVV-SGSGDGTLHAWNINTRNEVACWNGNI 186
D G+ F+ P E F P +Y++ SGS T+ W++ + V+C
Sbjct: 175 DLTAGKVMFEFTGHYGPVNVVE--FHPSIEYLLASGSSSMTIRFWDLEKFHVVSCIEEEA 232
Query: 187 GVVACLKWAP 196
V C+ + P
Sbjct: 233 TPVRCILFNP 242
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGILRLRGRPTVAFD-- 63
++ F+ HKE + SP ++ F + S D +VRIWD LR + + ILR G D
Sbjct: 195 VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWH 253
Query: 64 -QQGLVFAVAMEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+GLV + + ++ IK +D ++ T +T V ++K + +G + LLT +
Sbjct: 254 PTKGLVVSGSKDSQQPIKFWDPKTGQS--LATLHAHKNT--VMEVKLNLNG-NWLLTASR 308
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTP--DGQYVVSGSGDGTLHAWNINTR 176
+++ L K L+ EAT + P +G + SG DG+L W++
Sbjct: 309 DHLCKLFDIRNLKE---ELQVFRGHKKEATAVAWHPVHEGLFA-SGGSDGSLLFWHVGVE 364
Query: 177 NEVACWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN-PSSNSTD 221
EV + G++ L W P + + S+ FW N P D
Sbjct: 365 KEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD 413
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGILRLRGRPTVAFD-- 63
++ F+ HKE + SP ++ F + S D +VRIWD LR + + ILR G D
Sbjct: 191 VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWH 249
Query: 64 -QQGLVFAVAMEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+GLV + + ++ IK +D ++ T +T V ++K + +G + LLT +
Sbjct: 250 PTKGLVVSGSKDSQQPIKFWDPKTGQS--LATLHAHKNT--VMEVKLNLNG-NWLLTASR 304
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTP--DGQYVVSGSGDGTLHAWNINTR 176
+++ L K L+ EAT + P +G + SG DG+L W++
Sbjct: 305 DHLCKLFDIRNLKE---ELQVFRGHKKEATAVAWHPVHEGLFA-SGGSDGSLLFWHVGVE 360
Query: 177 NEVACWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN-PSSNSTD 221
EV + G++ L W P + + S+ FW N P D
Sbjct: 361 KEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD 409
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGILRLRGRPTVAFD-- 63
++ F+ HKE + SP ++ F + S D +VRIWD LR + + ILR G D
Sbjct: 195 VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWH 253
Query: 64 -QQGLVFAVAMEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+GLV + + ++ IK +D ++ T +T V ++K + +G + LLT +
Sbjct: 254 PTKGLVVSGSKDSQQPIKFWDPKTGQS--LATLHAHKNT--VMEVKLNLNG-NWLLTASR 308
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTP--DGQYVVSGSGDGTLHAWNINTR 176
+++ L K L+ EAT + P +G + SG DG+L W++
Sbjct: 309 DHLCKLFDIRNLKE---ELQVFRGHKKEATAVAWHPVHEGLFA-SGGSDGSLLFWHVGVE 364
Query: 177 NEVACWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN-PSSNSTD 221
EV + G++ L W P + + S+ FW N P D
Sbjct: 365 KEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD 413
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGILRLRGRPTVAFD-- 63
++ F+ HKE + SP ++ F + S D +VRIWD LR + + ILR G D
Sbjct: 195 VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWH 253
Query: 64 -QQGLVFAVAMEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+GLV + + ++ IK +D ++ T +T V ++K + +G + LLT +
Sbjct: 254 PTKGLVVSGSKDSQQPIKFWDPKTGQS--LATLHAHKNT--VMEVKLNLNG-NWLLTASR 308
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTP--DGQYVVSGSGDGTLHAWNINTR 176
+++ L K L+ EAT + P +G + SG DG+L W++
Sbjct: 309 DHLCKLFDIRNLKE---ELQVFRGHKKEATAVAWHPVHEGLFA-SGGSDGSLLFWHVGVE 364
Query: 177 NEVACWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN-PSSNSTD 221
EV + G++ L W P + + S+ FW N P D
Sbjct: 365 KEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD 413
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGILRLRGRPTVAFD-- 63
++ F+ HKE + SP ++ F + S D +VRIWD LR + + ILR G D
Sbjct: 195 VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWH 253
Query: 64 -QQGLVFAVAMEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+GLV + + ++ IK +D ++ T +T V ++K + +G + LLT +
Sbjct: 254 PTKGLVVSGSKDSQQPIKFWDPKTGQS--LATLHAHKNT--VMEVKLNLNG-NWLLTASR 308
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTP--DGQYVVSGSGDGTLHAWNINTR 176
+++ L K L+ EAT + P +G + SG DG+L W++
Sbjct: 309 DHLCKLFDIRNLKE---ELQVFRGHKKEATAVAWHPVHEGLFA-SGGSDGSLLFWHVGVE 364
Query: 177 NEVACWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN-PSSNSTD 221
EV + G++ L W P + + S+ FW N P D
Sbjct: 365 KEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD 413
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 131 (51.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGILRLRGRPTVAFD-- 63
++ F+ HKE + SP ++ F + S D +VRIWD LR + + ILR G D
Sbjct: 195 VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWH 253
Query: 64 -QQGLVFAVAMEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+GLV + + ++ IK +D ++ T +T V ++K + +G + LLT +
Sbjct: 254 PTKGLVVSGSKDSQQPIKFWDPKTGQS--LATLHAHKNT--VMEVKLNLNG-NWLLTASR 308
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTP--DGQYVVSGSGDGTLHAWNINTR 176
+++ L K L+ EAT + P +G + SG DG+L W++
Sbjct: 309 DHLCKLFDIRNLKE---ELQVFRGHKKEATAVAWHPVHEGLFA-SGGSDGSLLFWHVGVE 364
Query: 177 NEVACWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN-PSSNSTD 221
EV + G++ L W P + + S+ FW N P D
Sbjct: 365 KEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD 413
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 125 (49.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 106 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 163
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 164 PQLVCTGSDDGTVKLWDIRK--KAAIQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 218
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 219 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 276
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASS 206
+ GN+ ++ C W+P + A S+
Sbjct: 277 FQGNVHNFEKNLLRC-SWSPDGSKIAAGSA 305
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 46/210 (21%), Positives = 92/210 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFD----QQG 66
KGH V+ L + S S D +V +WD + + RL+G + ++G
Sbjct: 107 KGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETG--ERVKRLKGHTSFVNSCYPARRG 164
Query: 67 -LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 165 PQLVCTGSDDGTVKLWDIRK--KAAVQTFQ---NTYQVLAVTFNDTSDQIISGGIDNDIK 219
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN--TRNE--VAC 181
V D + + +++ ++ T + + +G Y++S + D T+ W++ E V
Sbjct: 220 VWDLR--QNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 182 WNGNI-----GVVACLKWAPRRAMFVAASS 206
+ GN+ ++ C W+P + A S+
Sbjct: 278 FQGNVHNFEKNLLRC-SWSPDGSKIAAGSA 306
Score = 122 (48.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/211 (23%), Positives = 94/211 (44%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFM-SGSLDHSVRIWDLRVNAC-QGILRLRGRPTVAF 62
R+ R KGH V S + + +GS D +V++WD+R A Q V F
Sbjct: 144 RVKR-LKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTF 202
Query: 63 -DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
D + + ++ IK++D R T+ + G V + S++G +L +
Sbjct: 203 NDTSDQIISGGID-NDIKVWDLRQNKL----TYTMRGHADSVTGLSLSSEGSYLLSNAMD 257
Query: 122 NNIYVLDA--YGGEKRCGFSLEPSPNT---NT-EATFTPDGQYVVSGSGDGTLHAWNINT 175
N + V D + ++RC + + + N +++PDG + +GS D ++ W+ +
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 176 RNEVACWNGNIGVVACLKWAPRRAMFVAASS 206
R + G+ G + + + P + ++ASS
Sbjct: 318 RRVLYKLPGHAGSINEVAFHPDEPIILSASS 348
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 123 (48.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/173 (24%), Positives = 80/173 (46%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTV 60
+++R F+GH +V ++ + +SGS+D SVR WD R + + L G +V
Sbjct: 100 QVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWDCRSRKPEPVQTLDEARDGISSV 159
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
V A +++ G ++ +D R G + VG C FS DG+ L+++
Sbjct: 160 KVSDHE-VLAGSVD-GRVRRYDLRM---GQLFSDYVGSPITCTC---FSRDGQCTLVSSL 211
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
++ + +LD GE ++ + + + +VVS S DG + W++
Sbjct: 212 DSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDL 264
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 135 RCGFSLEPSPNTNTEATFTPD-GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLK 193
RC S+ T A F+P +V+GSGD T W+ +T+ +A G+ V+C+
Sbjct: 125 RCTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVA 184
Query: 194 WAPRRAMFVAAS--SVLSFWIPNPSS 217
WAP ++ S + + FW P S
Sbjct: 185 WAPDASIIATGSMDNTIRFWDPKKGS 210
Score = 115 (45.5 bits), Expect = 0.00039, P = 0.00039
Identities = 40/163 (24%), Positives = 71/163 (43%)
Query: 14 KERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTV----AFDQQGLVF 69
KER C+ + +S S D + +WD + + + I ++ G V +F G
Sbjct: 347 KERY-EACLKQSGERLVSASDDLQLILWDPQ-KSTKPITKMHGHQKVVNHASFSPDGRCI 404
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
A A +++L+D ++ G F L G A V +S D + ++ ++ + + V D
Sbjct: 405 ATASFDSSVRLWDGKT---GKFLATL-RGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDV 460
Query: 130 YGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWN 172
K+ F L + ++PDGQ V SG D + W+
Sbjct: 461 RS--KKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
Score = 106 (42.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 41/184 (22%), Positives = 76/184 (41%)
Query: 31 SGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKLFDSRSYDKGP 90
S S D ++RIWD + C IL+ G + L + +GA +D +
Sbjct: 285 SSSYDKTIRIWDAKDGKCLHILK--GH-AARVNHLSLSTEHVLRSGA---YDHTDFKPKS 338
Query: 91 F-DTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTE 149
F D + E C +K S G+ ++ + + + + D K +
Sbjct: 339 FSDERRKAKERYEAC-LKQS--GERLVSASDDLQLILWDPQKSTKPIT-KMHGHQKVVNH 394
Query: 150 ATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS--SV 207
A+F+PDG+ + + S D ++ W+ T +A G++ V W+ + V++S +
Sbjct: 395 ASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTT 454
Query: 208 LSFW 211
L W
Sbjct: 455 LKVW 458
Score = 59 (25.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 12 GHKERVISLCMSPVNDS-FMSGSLDHSVRIWD 42
GH +IS SP S ++GS D + R+WD
Sbjct: 132 GHDGTIISAQFSPSTSSRLVTGSGDFTARLWD 163
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 105 (42.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 109 SNDGKSMLLTTTN--NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDG 166
+N K + L + + + + + DA G+ C F+ P + F+P+G+Y+ SGS D
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSL--AFSPNGEYIASGSLDK 563
Query: 167 TLHAWNINTRNEVACWNGNIGV 188
++H W+I V + GN G+
Sbjct: 564 SIHIWSIKEGKIVKTYTGNGGI 585
Score = 64 (27.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 4 NRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDL 43
N +R +GH V + SP SGS D + RIW +
Sbjct: 255 NSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSI 294
Score = 51 (23.0 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLR 44
+ R + F GH+ V + P S S D + +IW+++
Sbjct: 437 ETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK 478
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 126 (49.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 50/198 (25%), Positives = 85/198 (42%)
Query: 1 MYDNRILRYFK-GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT 59
MY ++ R K G K V SP ++GS+D + +W+ + L+ + +
Sbjct: 200 MYPTQLFRQIKFGQKSHVECAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQ 259
Query: 60 VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTF-LVGGD---------TAEVCDIKFS 109
+Q V A+ + ++ S + D G + ++ G T + ++FS
Sbjct: 260 FMMMEQA-VLALNFSRDS-EMVASGAQD-GQIKVWRIITGQCLRKFEKAHTKGITCLQFS 316
Query: 110 NDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLH 169
D +L + + + + G+ F S N EATFTPDG V+S S DGT+
Sbjct: 317 RDNSQVLSASFDYTVRLHGLKSGKMLKEFKGHSS-FVN-EATFTPDGHSVLSASSDGTVK 374
Query: 170 AWNINTRNEVACWN--GN 185
W++ T VA + GN
Sbjct: 375 VWSLKTTECVATYKPLGN 392
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 131 (51.2 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 61/229 (26%), Positives = 102/229 (44%)
Query: 7 LRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGILRLRGRPTVAFD-- 63
++ F+ HKE + SP ++ F + S D +VRIWD LR + + ILR G D
Sbjct: 196 VKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHE-ERILRGHGADVKCVDWH 254
Query: 64 -QQGLVFAVAMEAGA-IKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+GLV + + ++ IK +D ++ T +T V ++K + +G + LLT +
Sbjct: 255 PTKGLVVSGSKDSQQPIKFWDPKTGQS--LATLHAHKNT--VMEVKLNLNG-NWLLTASR 309
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEAT---FTP--DGQYVVSGSGDGTLHAWNINTR 176
+++ L K L+ EAT + P +G + SG DG+L W++
Sbjct: 310 DHLCKLFDIRNLKE---ELQVFRGHKKEATAVAWHPVHEGLFA-SGGSDGSLLFWHVGVE 365
Query: 177 NEVACWN-GNIGVVACLKWAPRRAMFVAASS--VLSFWIPN-PSSNSTD 221
EV + G++ L W P + + S+ FW N P D
Sbjct: 366 KEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRD 414
>ZFIN|ZDB-GENE-040426-916 [details] [associations]
symbol:smu1 "smu-1 suppressor of mec-8 and unc-52
homolog (C. elegans)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-040426-916 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 CTD:55234
HOGENOM:HOG000264846 HOVERGEN:HBG079573 KO:K13111 OrthoDB:EOG49ZXP0
EMBL:BC045945 IPI:IPI00505889 RefSeq:NP_956493.1 UniGene:Dr.31728
ProteinModelPortal:Q7ZVA0 STRING:Q7ZVA0 PRIDE:Q7ZVA0 GeneID:393168
KEGG:dre:393168 InParanoid:Q7ZVA0 NextBio:20814238
ArrayExpress:Q7ZVA0 Uniprot:Q7ZVA0
Length = 513
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 44/185 (23%), Positives = 76/185 (41%)
Query: 2 YDNRILRYFK-GHKERVISLCMSPVNDSFMSGSLDHSVRIW---------DLRVNACQGI 51
+ ++ R+ K G K V SP ++GS+D + +W DL+ A
Sbjct: 201 FPTQLARHIKFGQKSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNF 260
Query: 52 LRLRGRPT-VAFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSN 110
+ + ++F + + A + G IK++ +S G + V + FS
Sbjct: 261 MMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQS---GQCLRRYERAHSKGVTCLSFSK 317
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHA 170
D +L + + I + G +C + EAT TPDG + +S S DGT+
Sbjct: 318 DSTQILSASFDQTIRIHGLKSG--KCLKEFRGHSSFVNEATLTPDGHHAISASSDGTVKV 375
Query: 171 WNINT 175
WN+ T
Sbjct: 376 WNMKT 380
>DICTYBASE|DDB_G0292834 [details] [associations]
symbol:DDB_G0292834 "cyclin-like F-box containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
dictyBase:DDB_G0292834 InterPro:IPR001480 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
EMBL:AAFI02000197 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 PROSITE:PS50927 RefSeq:XP_629376.1
ProteinModelPortal:Q54CP0 STRING:Q54CP0 EnsemblProtists:DDB0237860
GeneID:8628894 KEGG:ddi:DDB_G0292834 OMA:HNEGIRA Uniprot:Q54CP0
Length = 569
Score = 87 (35.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 155 DGQYVVSGSGDGTLHAWNINTRNE-VACWNGNIGVVACLKWAPRRAMFVAASSVLSFWIP 213
+G +V+GS D T+ W++ ++N ++ G+ G V CL+W + + + +W
Sbjct: 468 NGNVLVTGSDDTTVRVWDLRSKNSNISTLRGHNGSVRCLQWDGTTLITGSNDQSVRWWNL 527
Query: 214 NPSSNSTDE 222
N S+ + E
Sbjct: 528 NYDSDQSKE 536
Score = 83 (34.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR 55
C+ N+ +GSLD+S+RIWDL +GIL R
Sbjct: 278 CLDVNNNIMATGSLDNSIRIWDLEKGKSKGILTTR 312
Score = 68 (29.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAV 71
GH V +L + ++ +GS D + ++WD + C+ L P D + A
Sbjct: 231 GHTGTVWALHLD--DERVYTGSFDKTAKVWDTKTKKCRFTLAGHYYPIQCLDVNNNIMAT 288
Query: 72 AMEAGAIKLFD-SRSYDKGPFDT 93
+I+++D + KG T
Sbjct: 289 GSLDNSIRIWDLEKGKSKGILTT 311
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/168 (25%), Positives = 78/168 (46%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVA---FD-QQG 66
KGH V+ L + S S D +V +WD + + RL+G + F ++G
Sbjct: 96 KGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETG--ERVKRLKGHTSFVNSCFPARRG 153
Query: 67 LVFA-VAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIY 125
A + G +KL+D R K TF +T +V + F++ ++ +N+I
Sbjct: 154 PQLACTGSDDGTVKLWDIRK--KASVHTFQ---NTYQVLSVTFNDTSDQIISGGIDNDIK 208
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI 173
V D + + +S++ ++ T + + DG Y++S S D ++ W+I
Sbjct: 209 VWDLR--QNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDI 254
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 45/192 (23%), Positives = 81/192 (42%)
Query: 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKL 80
C+ +D +SG D+S++IWD C +L + V +++
Sbjct: 196 CLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRV 255
Query: 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD-AYGGEKRCGFS 139
+D + G L+ + A V ++FSN M+ + + +I V D A +
Sbjct: 256 WDVNT---GEVLNTLIHHNEA-VLHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRV 309
Query: 140 LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA 199
L F D +Y+VS SGD T+ W+ +T V NG+ +ACL++ R
Sbjct: 310 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLV 367
Query: 200 MFVAASSVLSFW 211
+ ++ + + W
Sbjct: 368 VSGSSDNTIRLW 379
>UNIPROTKB|Q6GPU3 [details] [associations]
symbol:dtl-b "Denticleless protein homolog B" species:8355
"Xenopus laevis" [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006513 "protein
monoubiquitination" evidence=ISS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0019985 "translesion synthesis" evidence=ISS]
[GO:0031464 "Cul4A-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031465 "Cul4B-RING ubiquitin ligase complex" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0051726
"regulation of cell cycle" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0009411 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006511 GO:GO:0000209 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 EMBL:BC073015 RefSeq:NP_001085609.1 UniGene:Xl.34158
ProteinModelPortal:Q6GPU3 GeneID:444035 KEGG:xla:444035 CTD:51514
Xenbase:XB-GENE-985629 Uniprot:Q6GPU3
Length = 711
Score = 107 (42.7 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 44/181 (24%), Positives = 79/181 (43%)
Query: 60 VAFDQQGLVFAVAMEAGAIKLFDSR----SYDKGPFDTFLV---GGDTAEV--CDIKFSN 110
V F + V + G +K++D R +Y + P L G T ++ +
Sbjct: 223 VIFQDEYTVISAGAVDGVVKIWDLRKNYSTYRQDPVPVKLFPYPGNSTRKLGYSSLVLDP 282
Query: 111 DGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNT---EATFTPDGQYVVSGSGDGT 167
G ++ + T++N+Y+ +A G K S+ +T +A+ +PDGQ+++SGS D +
Sbjct: 283 TGTNLFASCTDDNVYMFNATG-LKTDPVSVFRGHQNSTFYIKASVSPDGQFLLSGSSDHS 341
Query: 168 LHAWNINTRNEVACWN--GNIGVVACLKWAPRRAMFVAASS---VLSFWIPNPSSNSTDE 222
+ W ++ A N G+ V + W +A S + W N SS + E
Sbjct: 342 AYIWQVSDPL-AAPINLIGHCQEVTSVAWCQSDFTKIATCSDDNTVRIWRLNRSSEDSSE 400
Query: 223 S 223
S
Sbjct: 401 S 401
Score = 62 (26.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 11 KGHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILR 53
KGH+ + S+ S + F +G D ++ +WD R N G R
Sbjct: 137 KGHQCSLKSVAFSKFERAVFSTGGRDGNIMVWDTRCNKKDGFYR 180
>MGI|MGI:1920933 [details] [associations]
symbol:Atg16l2 "autophagy related 16-like 2 (S. cerevisiae)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006914 "autophagy" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1920933 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031
eggNOG:COG2319 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000112569 HOVERGEN:HBG050534
InterPro:IPR013923 Pfam:PF08614 GO:GO:0006914 CTD:89849
OrthoDB:EOG44F68R EMBL:AK131109 EMBL:AC107638 EMBL:BC060054
IPI:IPI00755633 IPI:IPI00895049 RefSeq:NP_001104581.1
UniGene:Mm.275744 ProteinModelPortal:Q6KAU8 SMR:Q6KAU8
PhosphoSite:Q6KAU8 PRIDE:Q6KAU8 Ensembl:ENSMUST00000120267
Ensembl:ENSMUST00000139609 Ensembl:ENSMUST00000143630 GeneID:73683
KEGG:mmu:73683 UCSC:uc009iof.2 InParanoid:Q6KAU8 OMA:QGPHCTA
NextBio:338795 Bgee:Q6KAU8 Genevestigator:Q6KAU8 Uniprot:Q6KAU8
Length = 623
Score = 126 (49.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 45/188 (23%), Positives = 80/188 (42%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRG--RPTVAFDQQGLVF 69
GHK++V + ++GS D +V+ WDL C + + V D +
Sbjct: 424 GHKDKVTAAKFKLTRHQAVTGSRDRTVKEWDLGRAYCSRTINVLSYCNDVVCGDH---II 480
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDA 129
I+ +DSR GP ++ V + S D +L + +N + V+D
Sbjct: 481 ISGHNDQKIRFWDSR----GPHCIQVIPVQ-GRVTSLHLSYDQLHLLSCSRDNTLKVIDL 535
Query: 130 YGGEKRCGFSLEPSPNTN--TEATFTPDGQYVVSGSGDGTLHAWNINT-RNEVACWNGNI 186
R F + ++ T+A F+PD Y ++GS +G L+ W++NT + E + +
Sbjct: 536 RISNIRQVFRADGFKCSSDWTKAVFSPDRSYALAGSSNGDLYIWDVNTGKLETSLQGPHC 595
Query: 187 GVVACLKW 194
V + W
Sbjct: 596 TAVNAVAW 603
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 125 (49.1 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 45/192 (23%), Positives = 81/192 (42%)
Query: 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKL 80
C+ +D +SG D+S++IWD C +L + V +++
Sbjct: 230 CLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRV 289
Query: 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD-AYGGEKRCGFS 139
+D + G L+ + A V ++FSN M+ + + +I V D A +
Sbjct: 290 WDVNT---GEVLNTLIHHNEA-VLHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRV 343
Query: 140 LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA 199
L F D +Y+VS SGD T+ W+ +T V NG+ +ACL++ R
Sbjct: 344 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLV 401
Query: 200 MFVAASSVLSFW 211
+ ++ + + W
Sbjct: 402 VSGSSDNTIRLW 413
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 126 (49.4 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 48/199 (24%), Positives = 78/199 (39%)
Query: 13 HKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PT--VAFDQQGLV 68
H V SP N +S S D S R+W V+ ++ +G P VAF G
Sbjct: 378 HSGPVYGTTFSPDNKYLLSCSEDASARLWS--VDTKTALVAYKGHTGPVWDVAFGPFGHY 435
Query: 69 FAVAMEAGAIKLFD-SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
FA A +L+ Y P F G ++V + F + +L +++ +
Sbjct: 436 FATASHDQTAQLWSCDHIY---PLRVF--AGHLSDVDCVTFHPNSAYVLTGSSDKTCRLW 490
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
D + G F+ P T PDG + S +G +H W+I T + G+ G
Sbjct: 491 DVHRGHSVRVFNGHTQPVT--AVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRG 548
Query: 188 VVACLKWAPRRAMFVAASS 206
+ L ++ + V+ S
Sbjct: 549 NIYSLSFSRESTVLVSGGS 567
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 48/219 (21%), Positives = 90/219 (41%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT--VAFDQQGLVF 69
GH V S SP N +SGS D +VR+W + + + P V+F G F
Sbjct: 523 GHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHYF 582
Query: 70 AVAMEAGAIKLFD-SRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
A A +L+ Y P F G +V + F +G + +++ + D
Sbjct: 583 ATASHDQTARLWSCDHIY---PLRIF--AGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD 637
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGN-IG 187
G+ F +P + PDG+++ +GS DG ++ W+I T + G+
Sbjct: 638 VSTGDSVRLFLGHTAPVISIAVC--PDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKN 695
Query: 188 VVACLKWAPRRAMFVAASSVLSFWIPNPSSNSTDESTDP 226
+ L ++ + ++ + + + + +T+ S +P
Sbjct: 696 AIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEPSAEP 734
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 125 (49.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 45/192 (23%), Positives = 81/192 (42%)
Query: 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKL 80
C+ +D +SG D+S++IWD C +L + V +++
Sbjct: 245 CLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRV 304
Query: 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD-AYGGEKRCGFS 139
+D + G L+ + A V ++FSN M+ + + +I V D A +
Sbjct: 305 WDVNT---GEVLNTLIHHNEA-VLHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRV 358
Query: 140 LEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRA 199
L F D +Y+VS SGD T+ W+ +T V NG+ +ACL++ R
Sbjct: 359 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLV 416
Query: 200 MFVAASSVLSFW 211
+ ++ + + W
Sbjct: 417 VSGSSDNTIRLW 428
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 125 (49.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 41/169 (24%), Positives = 75/169 (44%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLV 68
+GH++ V S+ S + S S D +V+IWD + Q L +V F +
Sbjct: 376 EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQL 435
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
A A + +K++D+ + G L G V + FS+D + + + + + + D
Sbjct: 436 LASASDDSTVKIWDTGT---GSLQHTLEG-HRDWVRSVIFSHDSRLLASASDDRTVRIWD 491
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRN 177
G + +LE + T +F+ D + + S S D T+ W+I R+
Sbjct: 492 TEKGSHK--HTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIEARS 538
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 123 (48.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 42/168 (25%), Positives = 75/168 (44%)
Query: 12 GHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILR-LRGRPT-VAFDQQGLVF 69
GH +ISLC + D ++GS DH+ +WD+ +L RG + V F+ +
Sbjct: 217 GHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLI 276
Query: 70 AVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN--NNIYVL 127
A A + K++D+ G L+G + EV D+ F+ G+ + + + + ++
Sbjct: 277 ATASLDKSCKVWDAEG---GQCLATLLGHND-EVLDVCFNYTGQLIATASADGTSRVFST 332
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINT 175
D + +C LE ++ F G V++ S D T W + T
Sbjct: 333 DTF----QCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKT 376
Score = 117 (46.2 bits), Expect = 0.00017, P = 0.00017
Identities = 45/209 (21%), Positives = 90/209 (43%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR----PTVAFDQQ 65
F+GH ++ L +P + +GS+D + ++WD V + + + L G ++ F+
Sbjct: 173 FRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWD--VESGEEVSTLAGHFAEIISLCFNTT 230
Query: 66 G-LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNI 124
G + + + AI L+D S K ++ G E+ ++F+ D + + + +
Sbjct: 231 GDRLVTGSFDHTAI-LWDVPSGRK----VHVLSGHRGEISCVQFNWDCSLIATASLDKSC 285
Query: 125 YVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNG 184
V DA GG+ C +L + + F GQ + + S DGT ++ +T + G
Sbjct: 286 KVWDAEGGQ--CLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEG 343
Query: 185 NIGVVA--CLKWAPRRAMFVAASSVLSFW 211
+ G ++ C R + + W
Sbjct: 344 HKGEISKVCFNAQGSRVLTASVDKTSRVW 372
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 121 (47.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/224 (21%), Positives = 93/224 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR----GRPTV 60
++ R +GH +V + + +SGS+D +VR WD R + I L G ++
Sbjct: 100 QVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDGISSL 159
Query: 61 AFDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTT 120
+ L+ +++ G ++ +D R G +G VC FS DG+ L ++
Sbjct: 160 KVSEHELLTG-SVD-GRVRRYDLRM---GQLQVDYIGSPITCVC---FSRDGQCTLSSSL 211
Query: 121 NNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVA 180
++ + +LD GE +S + + T +V+S S DG ++ W++ +
Sbjct: 212 DSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSLTL 271
Query: 181 CWNGNIGVVACLKWAPRRA-MFVAASSVLSFWIPNPSSNSTDES 223
VV L + P + + + W P + +ES
Sbjct: 272 KLPVGKAVVQSLSFHPTEPRLLTSMEGRVQVWGAEPEDAAENES 315
>UNIPROTKB|F5GZ90 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
HGNC:HGNC:30288 IPI:IPI01011401 ProteinModelPortal:F5GZ90
SMR:F5GZ90 Ensembl:ENST00000542077 UCSC:uc010ptb.2
ArrayExpress:F5GZ90 Bgee:F5GZ90 Uniprot:F5GZ90
Length = 688
Score = 105 (42.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 63 DQQGLVFAVAMEAGAIKLFDSR----SYDKGPF--DTFLV-GGDTAEV--CDIKFSNDGK 113
D+ LV A A++ G IK++D R +Y + P +FL G T ++ + + G
Sbjct: 184 DENTLVSAGAVD-GIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGS 242
Query: 114 SMLLTTTNNNIYVLDAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
++ T++NIY+ + G + F+ + +++ +PD Q++VSGS D + W
Sbjct: 243 TLFANCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIW 302
Query: 172 NINTR-NEVACWNGNIGVVACLKWAPRRAMFVAASS---VLSFW 211
++T G+ V + W P +A S L W
Sbjct: 303 KVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIW 346
Score = 63 (27.2 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 11 KGHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILR 53
KGH+ + S+ S + F +G D ++ +WD R N G R
Sbjct: 95 KGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 138
>UNIPROTKB|E2R5F8 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 CTD:55054 GO:GO:0000421 InterPro:IPR013923
Pfam:PF08614 OMA:LETECQE EMBL:AAEX03014453 RefSeq:XP_850664.1
ProteinModelPortal:E2R5F8 Ensembl:ENSCAFT00000018720 GeneID:477412
KEGG:cfa:477412 NextBio:20852897 Uniprot:E2R5F8
Length = 607
Score = 125 (49.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 49/199 (24%), Positives = 92/199 (46%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNAC-QGILRLRGRPTVA 61
D R+ GH +V+S N +SGS D ++++WDLR C + + +
Sbjct: 397 DYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIV 456
Query: 62 FDQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
+Q V + + I+ +D RS + + L+G TA D+ N ++ LL+ +
Sbjct: 457 CTEQ-CVMSGHFDK-KIRFWDIRS-ESIVREMELLGKITA--LDL---NPERTELLSCSR 508
Query: 122 NNIY-VLDAYGGEKRCGFSLE--PSPNTNTEATFTPDGQYVVSGSGDGTLHAWNI-NTRN 177
+++ ++D R FS + T F+PDG YV +GS +G+L+ W++ + +
Sbjct: 509 DDLLKIIDLRINAVRQTFSAPGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSVLSGKV 568
Query: 178 EVACWNGNIGVVACLKWAP 196
E + + + W+P
Sbjct: 569 EKVLSKQHGSSINAVAWSP 587
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 52/207 (25%), Positives = 83/207 (40%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFA 70
+GH RV + P + DHS R+WDL V + IL G D
Sbjct: 305 EGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQ--EEILHQEGHSKGVHDLHFHPDG 362
Query: 71 VAMEAGAIKLFDSRSYD--KGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
G + F +R +D G FL G E+ I FS +G + + +N V D
Sbjct: 363 SLAGTGGLDSF-ARVWDLRTGRCVMFLEG-HIKEIYSINFSPNGFHVATGSGDNACKVWD 420
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTP-DGQYVVSGSGDGTLHAWNINTRNEVACWNGNIG 187
++RC +++ N + F P DG Y+++G+ D T W + + G+ G
Sbjct: 421 LR--QRRCIYTIPAHQNLVSSVKFQPNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEG 478
Query: 188 VVACLKWAPRRAMFVAASSVLSF--WI 212
V + +P + S +F W+
Sbjct: 479 KVMGVDLSPDGQLIATCSYDRTFKLWM 505
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 85 (35.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 4 NRILRYFKGHKERVISLCMSP--VNDS---FMSGSLDHSVRIWDLRVNACQGIL--RLRG 56
N+I R GH + + LC P +N S S D S+RIWD + C IL +
Sbjct: 202 NQIGRVLTGHSKWITCLCWEPLHINPECRYLASASKDGSIRIWDTLMGRCDKILTGHTQS 261
Query: 57 RPTVAFDQQGLVFAVAMEAGAIKLFDSR 84
V + GL+++ + + IK++ S+
Sbjct: 262 VTCVKWGGDGLLYSSSQDR-TIKVWRSQ 288
Score = 82 (33.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 29/127 (22%), Positives = 51/127 (40%)
Query: 87 DKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNT 146
DK P + G A + + FS D + + + + +I + + G+ SL +
Sbjct: 374 DKKPLERMT--GHQALINQVLFSPDTRIIASASFDKSIKLWEGRTGKYLT--SLRGHVSA 429
Query: 147 NTEATFTPDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAP--RRAMFVAA 204
+ ++ D + +VSGS D TL W+ T+ G+ V W+P +R
Sbjct: 430 VYQIAWSADSRLLVSGSSDSTLKVWDAETKKLAIDLPGHADEVFATDWSPDGQRVASGGK 489
Query: 205 SSVLSFW 211
L W
Sbjct: 490 DKCLRIW 496
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 124 (48.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 45/193 (23%), Positives = 81/193 (41%)
Query: 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKL 80
C+ +D +SG D+S++IWD + C +L + V +++
Sbjct: 230 CLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRV 289
Query: 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 140
+D S G L+ + A V ++F N M+ + + +I V D SL
Sbjct: 290 WDVSS---GEVLNTLIHHNEA-VLHLRFCNG--LMVTCSKDRSIAVWDMASATD---ISL 340
Query: 141 EPSPNTNTEATFTPD--GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR 198
+ A D +Y+VS SGD T+ W+ +T V NG+ +ACL++ R
Sbjct: 341 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL 400
Query: 199 AMFVAASSVLSFW 211
+ ++ + + W
Sbjct: 401 VVSGSSDNTIRLW 413
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 123 (48.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 51/222 (22%), Positives = 96/222 (43%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVA 61
D R LR F GH + V +C + F+S + D +++WD C R P V
Sbjct: 186 DRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVK 245
Query: 62 F----DQQGLVFAVAMEAGAIKLFDSRSYD-KGPFDTFLVGGDTAEVCDIKFSNDGKSML 116
F D+Q L F M I +D RS + +D L +T I F ++ + +
Sbjct: 246 FNPDEDKQNL-FVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFV 299
Query: 117 LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176
T+ + ++ V + + + EPS ++ T +P+G+++ S D + + R
Sbjct: 300 STSDDKSLRVWE-WDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNR 358
Query: 177 ---NEVACWNGN-IGVVAC-LKWAPRRAMFVAA--SSVLSFW 211
N+ + G+ + AC + ++P + ++ + L+ W
Sbjct: 359 FRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 400
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 123 (48.4 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 51/222 (22%), Positives = 96/222 (43%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVA 61
D R LR F GH + V +C + F+S + D +++WD C R P V
Sbjct: 189 DRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVK 248
Query: 62 F----DQQGLVFAVAMEAGAIKLFDSRSYD-KGPFDTFLVGGDTAEVCDIKFSNDGKSML 116
F D+Q L F M I +D RS + +D L +T I F ++ + +
Sbjct: 249 FNPDEDKQNL-FVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFV 302
Query: 117 LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176
T+ + ++ V + + + EPS ++ T +P+G+++ S D + + R
Sbjct: 303 STSDDKSLRVWE-WDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNR 361
Query: 177 ---NEVACWNGN-IGVVAC-LKWAPRRAMFVAA--SSVLSFW 211
N+ + G+ + AC + ++P + ++ + L+ W
Sbjct: 362 FRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 403
>TAIR|locus:2121328 [details] [associations]
symbol:AT4G28450 "AT4G28450" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0080008
KO:K11806 OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158 EMBL:AF372943
EMBL:AY045624 EMBL:AY143901 IPI:IPI00548928 RefSeq:NP_567810.5
UniGene:At.2008 ProteinModelPortal:Q93VK1 SMR:Q93VK1 STRING:Q93VK1
PRIDE:Q93VK1 EnsemblPlants:AT4G28450.1 GeneID:828962
KEGG:ath:AT4G28450 TAIR:At4g28450 InParanoid:Q93VK1
PhylomeDB:Q93VK1 ProtClustDB:CLSN2691268 Genevestigator:Q93VK1
Uniprot:Q93VK1
Length = 452
Score = 123 (48.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 42/174 (24%), Positives = 79/174 (45%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSL-DHSVRIWDLRVN-ACQGILRLRGRPTVAFD-QQG 66
F+ + VIS+ +P + ++ S D S+ I+DLR++ A + I+ + ++A++ +
Sbjct: 199 FQWGTDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAARKIIMMTKTNSIAWNPMEP 258
Query: 67 LVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGD-TAEVCDIKFSNDGKSMLLTTTNNNIY 125
+ A E G+ FD R D+ V D + V DI FS G+ + + + ++
Sbjct: 259 MNLTAANEDGSCYSFDGRKLDEAK----CVHKDHVSAVMDIDFSPTGREFVTGSYDRSVR 314
Query: 126 VLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV 179
+ GG R + + ++ D YV+SGS D L W ++
Sbjct: 315 IFPYNGGHSREIYHTKRMQRVFC-VKYSCDATYVISGSDDTNLRLWKAKASEQL 367
>CGD|CAL0004633 [details] [associations]
symbol:orf19.7343 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 98 (39.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 154 PDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
PDG +SG DG +H W++ + + ++ V CL W+P FV S L W
Sbjct: 280 PDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLKIW 339
Query: 212 ----IPNPSSNS 219
+ N +SN+
Sbjct: 340 DLRKLENNNSNN 351
Score = 66 (28.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDL 43
+ H +R+ P+N+ +S S D + ++WDL
Sbjct: 218 QAHNDRITKTLFHPINNLIISTSFDQTWKLWDL 250
>UNIPROTKB|Q5A3W6 [details] [associations]
symbol:PRP4 "Potential spliceosomal U4/U6 snRNP protein
Prp4p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0004633 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 EMBL:AACQ01000069 KO:K12662 RefSeq:XP_716477.1
ProteinModelPortal:Q5A3W6 STRING:Q5A3W6 GeneID:3641939
KEGG:cal:CaO19.7343 Uniprot:Q5A3W6
Length = 458
Score = 98 (39.6 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 154 PDGQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAASS--VLSFW 211
PDG +SG DG +H W++ + + ++ V CL W+P FV S L W
Sbjct: 280 PDGGLFMSGGLDGIVHIWDLRSGRSIVTLQKHMAGVYCLDWSPNGYQFVTGSGDCSLKIW 339
Query: 212 ----IPNPSSNS 219
+ N +SN+
Sbjct: 340 DLRKLENNNSNN 351
Score = 66 (28.3 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 10/33 (30%), Positives = 19/33 (57%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDL 43
+ H +R+ P+N+ +S S D + ++WDL
Sbjct: 218 QAHNDRITKTLFHPINNLIISTSFDQTWKLWDL 250
>UNIPROTKB|Q9NZJ0 [details] [associations]
symbol:DTL "Denticleless protein homolog" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
"DNA replication" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0009411 "response to UV" evidence=IDA]
[GO:0019985 "translesion synthesis" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0006513
"protein monoubiquitination" evidence=IDA] [GO:0031464 "Cul4A-RING
ubiquitin ligase complex" evidence=IDA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IDA;TAS] [GO:0000209 "protein polyubiquitination"
evidence=IDA;TAS] [GO:0031465 "Cul4B-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0009411 EMBL:CH471100 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0031965 eggNOG:COG2319 GO:GO:0006511 GO:GO:0000209
GO:GO:0031572 GO:GO:0006513 GO:GO:0031464 GO:GO:0031465
GO:GO:0019985 HOVERGEN:HBG057737 KO:K11790 CTD:51514 OMA:ICTYFHR
OrthoDB:EOG4N5VWH EMBL:AF345896 EMBL:DQ641253 EMBL:AF195765
EMBL:AK000742 EMBL:AK001206 EMBL:AK001261 EMBL:AK027651
EMBL:AK292343 EMBL:AL606468 EMBL:AC092814 EMBL:AL592297
EMBL:BC033540 EMBL:BC033297 IPI:IPI00643808 IPI:IPI00827740
RefSeq:NP_057532.2 UniGene:Hs.656473 ProteinModelPortal:Q9NZJ0
SMR:Q9NZJ0 IntAct:Q9NZJ0 STRING:Q9NZJ0 PhosphoSite:Q9NZJ0
DMDM:302393825 PaxDb:Q9NZJ0 PRIDE:Q9NZJ0 DNASU:51514
Ensembl:ENST00000366991 GeneID:51514 KEGG:hsa:51514 UCSC:uc001hiz.4
GeneCards:GC01P212208 H-InvDB:HIX0020157 HGNC:HGNC:30288
HPA:HPA028016 MIM:610617 neXtProt:NX_Q9NZJ0 PharmGKB:PA142671941
InParanoid:Q9NZJ0 GenomeRNAi:51514 NextBio:55210
ArrayExpress:Q9NZJ0 Bgee:Q9NZJ0 CleanEx:HS_DTL
Genevestigator:Q9NZJ0 Uniprot:Q9NZJ0
Length = 730
Score = 105 (42.0 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 63 DQQGLVFAVAMEAGAIKLFDSR----SYDKGPF--DTFLV-GGDTAEV--CDIKFSNDGK 113
D+ LV A A++ G IK++D R +Y + P +FL G T ++ + + G
Sbjct: 226 DENTLVSAGAVD-GIIKVWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGS 284
Query: 114 SMLLTTTNNNIYVLDAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
++ T++NIY+ + G + F+ + +++ +PD Q++VSGS D + W
Sbjct: 285 TLFANCTDDNIYMFNMTGLKTSPVAIFNGHQNSTFYVKSSLSPDDQFLVSGSSDEAAYIW 344
Query: 172 NINTR-NEVACWNGNIGVVACLKWAPRRAMFVAASS---VLSFW 211
++T G+ V + W P +A S L W
Sbjct: 345 KVSTPWQPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKIW 388
Score = 63 (27.2 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 11 KGHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILR 53
KGH+ + S+ S + F +G D ++ +WD R N G R
Sbjct: 137 KGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 180
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 52/222 (23%), Positives = 96/222 (43%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVA 61
D R LR F GH + V +C + F+S + D +++WD C R P V
Sbjct: 322 DRRCLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVK 381
Query: 62 F----DQQGLVFAVAMEAGAIKLFDSRSYD-KGPFDTFLVGGDTAEVCDIKFSNDGKSML 116
F D+Q L F M I +D RS + +D L +T I F ++ + +
Sbjct: 382 FNPDEDKQNL-FVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFV 435
Query: 117 LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176
T+ + ++ V + + + EPS ++ T +P+G+++ S D + + R
Sbjct: 436 STSDDKSLRVWE-WDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNR 494
Query: 177 ---NEVACWNGN-IGVVAC-LKWAPRRAMFVA--ASSVLSFW 211
N+ + G+ + AC + ++P + ++ A L+ W
Sbjct: 495 FRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIW 536
>MGI|MGI:1337100 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=ISA] [GO:0015629
"actin cytoskeleton" evidence=ISA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1337100 GO:GO:0005737
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007605 HOVERGEN:HBG000780 CTD:9948
OrthoDB:EOG4WH8KB OMA:LKDQKKC ChiTaRS:WDR1 EMBL:AF020055
IPI:IPI00314748 RefSeq:NP_035845.1 UniGene:Mm.2654
UniGene:Mm.406120 ProteinModelPortal:O88342 SMR:O88342
STRING:O88342 PhosphoSite:O88342 REPRODUCTION-2DPAGE:IPI00314748
REPRODUCTION-2DPAGE:O88342 UCD-2DPAGE:O88342 PaxDb:O88342
PRIDE:O88342 Ensembl:ENSMUST00000005234 GeneID:22388 KEGG:mmu:22388
InParanoid:O88342 NextBio:302759 Bgee:O88342 CleanEx:MM_WDR1
Genevestigator:O88342 GermOnline:ENSMUSG00000005103 Uniprot:O88342
Length = 606
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/138 (24%), Positives = 65/138 (47%)
Query: 86 YDKGPFD-TFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSP 144
++ PF F +G + V ++FS DG + + I++ D GEK C +
Sbjct: 174 FEGPPFKFKFTIGDHSRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGESKAH 233
Query: 145 NTNTEA-TFTPDGQYVVSGSGDGTLHAWNINTRNEVACW--NGNI--GVVACLKWAPRRA 199
+ A +++PD +++S SGD T W++N + V+ + N+ + CL W
Sbjct: 234 DGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCL-WQKDHL 292
Query: 200 MFVAASSVLSFWIPN-PS 216
+ ++ S +++ N PS
Sbjct: 293 LSISLSGYINYLDKNNPS 310
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 124 (48.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 54/218 (24%), Positives = 89/218 (40%)
Query: 5 RILRY-FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVAF 62
R +R F GH++ + SL + + SGS D +VR+WD+ + + G TVA
Sbjct: 378 RTIRIQFAGHEQDIYSLDFARDGRTIASGSGDRTVRLWDIENGTALTVFTIEDGVTTVAI 437
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKG-PFDTFLVG--GDTAEVCDIKFSNDGKSML--- 116
A +++++D +G P + L G G V + FS +G+ ++
Sbjct: 438 SPDTKYVAAGSLDKSVRVWD---LTQGCPVER-LEGPDGHKDSVYSVAFSPNGRDLVTGS 493
Query: 117 ---------LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGT 167
L T N+ + GG RC + E + TPD Q+V+SGS D
Sbjct: 494 LDKTIKLWELATPRGNMQNQGSKGG--RCVKTFEGHRDFVLSVALTPDNQWVMSGSKDRG 551
Query: 168 LHAWNINTRNEVACWNGNIGVVACLKWAPRRAMFVAAS 205
+ W+ T + G+ V + +P F S
Sbjct: 552 VQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGS 589
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 103 VCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNT----EATFTPDGQY 158
VC ++FS DGK + T N + + D GEK C + + T F+PDG+Y
Sbjct: 302 VCCVRFSADGK-YVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKY 360
Query: 159 VVSGSGDGTLHAWNINTR 176
+ +G+ D + W+I TR
Sbjct: 361 LATGAEDKQIRVWDITTR 378
>TAIR|locus:2161840 [details] [associations]
symbol:TEX1 "AT5G56130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 KO:K12880 GO:GO:0010267
EMBL:AB011476 HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000264781
OMA:LAYACDD UniGene:At.29405 UniGene:At.29406 EMBL:AY093120
EMBL:BT000174 IPI:IPI00517881 RefSeq:NP_200424.1
ProteinModelPortal:Q9FKT5 SMR:Q9FKT5 STRING:Q9FKT5 PaxDb:Q9FKT5
PRIDE:Q9FKT5 EnsemblPlants:AT5G56130.1 GeneID:835712
KEGG:ath:AT5G56130 TAIR:At5g56130 InParanoid:Q9FKT5
PhylomeDB:Q9FKT5 ProtClustDB:CLSN2687157 ArrayExpress:Q9FKT5
Genevestigator:Q9FKT5 Uniprot:Q9FKT5
Length = 315
Score = 120 (47.3 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 45/166 (27%), Positives = 65/166 (39%)
Query: 11 KGHKERVISLCMSPVN-DSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVAFDQQGLV 68
KGH + V LC P + D + S D SVR+WD R C + L G + + G
Sbjct: 63 KGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENINITYKPDGTH 122
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
AV + + D R + F EV +I ++ G LTT + VL
Sbjct: 123 VAVGNRDDELTILDVRKFKPLHRRKF-----NYEVNEIAWNMPGDFFFLTTGLGTVEVL- 176
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNIN 174
+Y K + A P G+Y GS D + W+I+
Sbjct: 177 SYPSLKPLDTLTAHTAGCYCIA-IDPKGRYFAVGSADSLVSLWDIS 221
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 126 (49.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 44/157 (28%), Positives = 69/157 (43%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR--PTVAFDQQGLV 68
+GH V+S+ SP SGS D +VR+WD + Q LR +VAF G +
Sbjct: 734 EGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSPDGRL 793
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVG-GDTAEVCDIKFSNDGKSMLLTTTNNNIYVL 127
A ++L+D + G L G DT V + FS DG+ + + + + +
Sbjct: 794 LASGSFDKTVRLWDPAT---GSLQQTLRGHSDT--VRSVAFSPDGRLLASGSFDKTVRLW 848
Query: 128 DAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSG 164
D G + ++ T TE F+ DG Y+ + G
Sbjct: 849 DPATGTLQQTLIIK---GTVTELQFSQDGSYISTNLG 882
Score = 119 (46.9 bits), Expect = 0.00031, P = 0.00031
Identities = 43/148 (29%), Positives = 66/148 (44%)
Query: 11 KGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP--TVAFDQQGLV 68
+GH V S+ SP SGS D +VR+WD + Q LR +VAF G +
Sbjct: 776 RGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRL 835
Query: 69 FAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLD 128
A ++L+D + G L+ T V +++FS DG + +TN L
Sbjct: 836 LASGSFDKTVRLWDPAT---GTLQQTLIIKGT--VTELQFSQDGSYI---STN-----LG 882
Query: 129 AYGGEKRCGFSLEPSPNTNTEATFT-PD 155
+ + RCG +L SP +++ PD
Sbjct: 883 SLNIQSRCGNNLSSSPKMHSDILINGPD 910
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 123 (48.4 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 45/193 (23%), Positives = 81/193 (41%)
Query: 21 CMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAFDQQGLVFAVAMEAGAIKL 80
C+ ++ +SG D+S++IWD + C IL + V +++
Sbjct: 230 CLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRV 289
Query: 81 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSL 140
+D S G L+ + A V ++F N M+ + + +I V D SL
Sbjct: 290 WDVNS---GEVLNTLIHHNEA-VLHLRFCNG--LMVTCSKDRSIAVWDM---ASPTDISL 340
Query: 141 EPSPNTNTEATFTPD--GQYVVSGSGDGTLHAWNINTRNEVACWNGNIGVVACLKWAPRR 198
+ A D +Y+VS SGD T+ W+ +T V NG+ +ACL++ R
Sbjct: 341 RRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRL 400
Query: 199 AMFVAASSVLSFW 211
+ ++ + + W
Sbjct: 401 VVSGSSDNTIRLW 413
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 119 (46.9 bits), Expect = 5.4e-05, P = 5.3e-05
Identities = 38/177 (21%), Positives = 77/177 (43%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLR-GRPTVA-F 62
++ R GH ++ ++ + + SGS D VR+WD R N+ I L + +V+
Sbjct: 89 KVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSI 148
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN 122
D + G ++ +D R KG + + + +K S L+++ N+
Sbjct: 149 DIAEHLIVTGSTDGTLRTYDIR---KGTLSSDYF---SHPITSVKTSKSASFSLISSLNS 202
Query: 123 NIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTRNEV 179
+I++LD G+ + + ++F V SGS DG ++ W++ ++
Sbjct: 203 SIHLLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQI 259
>UNIPROTKB|E1BJV8 [details] [associations]
symbol:LOC539953 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0031572 "G2 DNA damage checkpoint" evidence=IEA] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=IEA] [GO:0031464
"Cul4A-RING ubiquitin ligase complex" evidence=IEA] [GO:0019985
"translesion synthesis" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0006513 "protein monoubiquitination"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005813 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0004842 GO:GO:0031572 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 KO:K11790
GeneTree:ENSGT00530000064210 OMA:ICTYFHR EMBL:DAAA02043770
IPI:IPI00695259 RefSeq:XP_003587156.1 Ensembl:ENSBTAT00000024147
GeneID:539953 KEGG:bta:539953 Uniprot:E1BJV8
Length = 730
Score = 104 (41.7 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 41/164 (25%), Positives = 74/164 (45%)
Query: 63 DQQGLVFAVAMEAGAIKLFDSR----SYDKGPF--DTFLV-GGDTAEV--CDIKFSNDGK 113
D+ LV A A++ G IK++D R +Y + P +FL G T ++ + + G
Sbjct: 226 DENTLVSAGAVD-GIIKIWDLRKNYTAYRQEPIASKSFLYPGSSTRKLGYSSLILDSTGS 284
Query: 114 SMLLTTTNNNIYVLDAYGGEKR--CGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
++ T++NIY+ + G + FS + +++ +PD Q++VSGS D + W
Sbjct: 285 TLFANCTDDNIYMFNMTGLKTSPVAVFSGHQNSTFYVKSSISPDDQFLVSGSSDEAAYIW 344
Query: 172 NINTR-NEVACWNGNIGVVACLKWAPRRAMFVAASS---VLSFW 211
++ + G+ V + W P +A S L W
Sbjct: 345 KVSMPWHPPTVLLGHSQEVTSVCWCPSDFTKIATCSDDNTLKVW 388
Score = 63 (27.2 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 11 KGHKERVISLCMSPVNDS-FMSGSLDHSVRIWDLRVNACQGILR 53
KGH+ + S+ S + F +G D ++ +WD R N G R
Sbjct: 137 KGHQCSLKSVAFSKFEKAVFCTGGRDGNIMVWDTRCNKKDGFYR 180
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 45/170 (26%), Positives = 70/170 (41%)
Query: 10 FKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPT----VAFDQQ 65
F H V+S+ +SP + F+SG+ D + ++WDLR C + G V +
Sbjct: 187 FSDHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKC--VQTFTGHEADINAVQYFPN 244
Query: 66 GLVFAVAMEAGAIKLFDSRSYDKG----PFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTN 121
GL F + + +LFD R+ D+ D L G + + FS G+ + +
Sbjct: 245 GLSFGTGSDDASCRLFDIRA-DRELMQYTHDNILCG-----ITSVGFSFSGRFLFAGYDD 298
Query: 122 NNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAW 171
V D GE+ SL N + DG + +GS D L W
Sbjct: 299 FTCNVWDTLKGERV--LSLTGHGNRVSCLGVPTDGMALCTGSWDSLLKIW 346
Score = 111 (44.1 bits), Expect = 0.00063, P = 0.00063
Identities = 46/206 (22%), Positives = 86/206 (41%)
Query: 5 RILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWD-LRVNACQGI-LRLRGRPTVAF 62
++ R KGH ++ ++ + N +S S D + +WD L N I LR T A+
Sbjct: 53 KVRRNLKGHLAKIYAMHWAEDNVHLVSASQDGKLLVWDGLTTNKVHAIPLRSSWVMTCAY 112
Query: 63 DQQGLVFAVAMEAGAIKLFDSRSYDKGPFDTFL-VGGDTAEVCDIKFSNDGKSMLLTTTN 121
A +++ RS ++ P + T + +F ND + ++T++
Sbjct: 113 SPTANFVACGGLDNICSIYNLRSREQ-PIRVCRELNSHTGYLSCCRFLNDRQ--IVTSSG 169
Query: 122 NNIYVL-DAYGGEKRCGFSLEPSPNTNT-EATFTPDGQYVVSGSGDGTLHAWNINTRNEV 179
+ +L D G K FS N + + +PD Y +SG+ D T W++ + V
Sbjct: 170 DMTCILWDVENGTKITEFS---DHNGDVMSVSVSPDKNYFISGACDATAKLWDLRSGKCV 226
Query: 180 ACWNGNIGVVACLKWAPRRAMFVAAS 205
+ G+ + +++ P F S
Sbjct: 227 QTFTGHEADINAVQYFPNGLSFGTGS 252
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 123 (48.4 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 51/222 (22%), Positives = 96/222 (43%)
Query: 3 DNRILRYFKGHKERVISLCMSPVNDSFMSGSLDHSVRIWDLRVNACQGILRLRGRP-TVA 61
D R LR F GH + V +C + F+S + D +++WD C R P V
Sbjct: 321 DRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVK 380
Query: 62 F----DQQGLVFAVAMEAGAIKLFDSRSYD-KGPFDTFLVGGDTAEVCDIKFSNDGKSML 116
F D+Q L F M I +D RS + +D L +T I F ++ + +
Sbjct: 381 FNPDEDKQNL-FVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNT-----IVFVDENRRFV 434
Query: 117 LTTTNNNIYVLDAYGGEKRCGFSLEPSPNTNTEATFTPDGQYVVSGSGDGTLHAWNINTR 176
T+ + ++ V + + + EPS ++ T +P+G+++ S D + + R
Sbjct: 435 STSDDKSLRVWE-WDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNR 493
Query: 177 ---NEVACWNGN-IGVVAC-LKWAPRRAMFVAA--SSVLSFW 211
N+ + G+ + AC + ++P + ++ + L+ W
Sbjct: 494 FRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
WARNING: HSPs involving 166 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 235 235 0.00088 113 3 11 22 0.42 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 416
No. of states in DFA: 611 (65 KB)
Total size of DFA: 202 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.44u 0.13s 21.57t Elapsed: 00:00:01
Total cpu time: 21.49u 0.13s 21.62t Elapsed: 00:00:01
Start: Sat May 11 01:27:38 2013 End: Sat May 11 01:27:39 2013
WARNINGS ISSUED: 2